Query 036342
Match_columns 596
No_of_seqs 443 out of 4308
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 20:11:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036342.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036342hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.9E-49 6.4E-54 450.3 32.8 369 2-381 285-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.5E-47 5.1E-52 434.7 28.2 360 8-371 267-722 (768)
3 3vq2_A TLR4, TOLL-like recepto 100.0 1.9E-43 6.6E-48 391.3 30.7 364 4-372 50-564 (606)
4 4eco_A Uncharacterized protein 100.0 8.5E-44 2.9E-48 395.0 25.1 332 21-365 194-578 (636)
5 3j0a_A TOLL-like receptor 5; m 100.0 1.4E-43 4.7E-48 406.2 26.3 367 3-371 41-565 (844)
6 3v47_A TOLL-like receptor 5B a 100.0 3.8E-43 1.3E-47 375.1 27.5 356 10-371 30-413 (455)
7 4eco_A Uncharacterized protein 100.0 9.2E-44 3.2E-48 394.7 22.6 352 2-370 198-604 (636)
8 3t6q_A CD180 antigen; protein- 100.0 5.8E-42 2E-46 379.4 33.3 354 1-366 26-438 (606)
9 3t6q_A CD180 antigen; protein- 100.0 2.4E-42 8E-47 382.5 28.6 302 60-370 255-564 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 2.2E-42 7.4E-47 390.7 25.8 327 26-365 440-818 (876)
11 2z7x_B TOLL-like receptor 1, v 100.0 4.7E-42 1.6E-46 373.1 27.4 349 1-370 14-485 (520)
12 2z81_A CD282 antigen, TOLL-lik 100.0 1.7E-42 5.7E-47 379.2 23.8 355 1-368 19-512 (549)
13 2z63_A TOLL-like receptor 4, v 100.0 1.4E-41 4.7E-46 373.6 28.7 143 2-151 22-164 (570)
14 1ziw_A TOLL-like receptor 3; i 100.0 2.2E-41 7.6E-46 379.8 29.5 353 12-371 250-627 (680)
15 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-40 5.2E-45 368.0 33.0 364 3-372 73-590 (606)
16 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.4E-41 1.8E-45 368.0 28.8 349 1-370 45-514 (562)
17 2id5_A Lingo-1, leucine rich r 100.0 5.9E-41 2E-45 360.4 26.9 348 12-371 13-361 (477)
18 4g8a_A TOLL-like receptor 4; l 100.0 3.5E-40 1.2E-44 366.7 32.3 361 1-370 45-584 (635)
19 3v47_A TOLL-like receptor 5B a 100.0 2E-40 6.7E-45 354.1 26.7 340 2-349 46-414 (455)
20 1ziw_A TOLL-like receptor 3; i 100.0 2.1E-39 7.1E-44 363.8 32.2 306 1-315 18-363 (680)
21 4ecn_A Leucine-rich repeat pro 100.0 2.9E-40 1E-44 373.4 24.6 349 2-367 481-865 (876)
22 2id5_A Lingo-1, leucine rich r 100.0 2.3E-39 8E-44 347.9 27.4 336 1-348 25-361 (477)
23 2z63_A TOLL-like receptor 4, v 100.0 2E-39 6.7E-44 356.4 26.8 361 3-372 45-537 (570)
24 3o6n_A APL1; leucine-rich repe 100.0 8.1E-39 2.8E-43 334.6 28.0 337 8-371 43-379 (390)
25 2z7x_B TOLL-like receptor 1, v 100.0 6.5E-39 2.2E-43 348.3 24.5 326 3-347 38-485 (520)
26 1o6v_A Internalin A; bacterial 100.0 9.2E-38 3.1E-42 334.3 32.2 327 6-368 64-390 (466)
27 3oja_B Anopheles plasmodium-re 100.0 2.9E-38 9.8E-43 348.5 28.7 338 8-372 49-386 (597)
28 2z81_A CD282 antigen, TOLL-lik 100.0 5.7E-39 1.9E-43 351.1 21.5 340 3-348 43-515 (549)
29 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9E-38 3.1E-42 342.4 24.1 333 3-348 69-515 (562)
30 4g8a_A TOLL-like receptor 4; l 100.0 5.2E-37 1.8E-41 341.1 28.6 367 3-372 69-612 (635)
31 3j0a_A TOLL-like receptor 5; m 100.0 4.3E-37 1.5E-41 352.4 27.7 350 1-367 18-415 (844)
32 4fmz_A Internalin; leucine ric 100.0 3E-36 1E-40 309.9 29.8 307 6-343 40-346 (347)
33 1o6v_A Internalin A; bacterial 100.0 4.3E-36 1.5E-40 321.4 28.9 326 9-370 45-370 (466)
34 3o6n_A APL1; leucine-rich repe 100.0 1.6E-36 5.4E-41 317.2 24.7 294 2-320 60-354 (390)
35 3bz5_A Internalin-J, INLJ; leu 100.0 7.2E-36 2.5E-40 317.7 28.1 316 3-365 35-367 (457)
36 4fmz_A Internalin; leucine ric 100.0 3.5E-35 1.2E-39 302.0 28.7 307 29-365 39-345 (347)
37 3oja_B Anopheles plasmodium-re 100.0 7.3E-36 2.5E-40 329.3 25.2 297 2-323 66-363 (597)
38 3bz5_A Internalin-J, INLJ; leu 100.0 4.8E-35 1.6E-39 311.3 26.5 320 2-371 57-392 (457)
39 1jl5_A Outer protein YOPM; leu 100.0 2.8E-35 9.4E-40 312.9 23.2 318 1-367 25-371 (454)
40 1xku_A Decorin; proteoglycan, 100.0 2.8E-34 9.6E-39 293.1 29.6 291 34-341 31-330 (330)
41 2ft3_A Biglycan; proteoglycan, 100.0 1.3E-34 4.6E-39 295.8 27.0 290 34-341 33-331 (332)
42 2ft3_A Biglycan; proteoglycan, 100.0 2.3E-34 7.8E-39 294.0 25.1 288 10-316 33-331 (332)
43 1ogq_A PGIP-2, polygalacturona 100.0 6E-35 2.1E-39 295.5 19.0 256 83-372 50-310 (313)
44 1xku_A Decorin; proteoglycan, 100.0 1.4E-33 4.7E-38 288.0 28.4 289 10-316 31-330 (330)
45 1jl5_A Outer protein YOPM; leu 100.0 2.3E-33 7.7E-38 298.2 29.3 264 59-367 131-410 (454)
46 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-34 5.3E-39 292.5 16.4 250 59-342 50-303 (313)
47 3omv_A RAF proto-oncogene seri 100.0 2.1E-34 7.3E-39 287.4 10.9 151 442-596 33-203 (307)
48 4aw0_A HPDK1, 3-phosphoinositi 100.0 4E-34 1.4E-38 284.7 11.2 148 445-596 32-203 (311)
49 1z7x_W Ribonuclease inhibitor; 100.0 4.7E-35 1.6E-39 312.9 2.0 352 11-365 4-410 (461)
50 4asz_A BDNF/NT-3 growth factor 100.0 9.1E-34 3.1E-38 282.8 8.6 149 445-596 13-199 (299)
51 4gt4_A Tyrosine-protein kinase 100.0 2.8E-33 9.5E-38 280.5 10.0 149 445-596 26-216 (308)
52 4b9d_A Serine/threonine-protei 100.0 2.1E-33 7E-38 284.3 9.1 148 444-596 23-194 (350)
53 4aoj_A High affinity nerve gro 100.0 5E-33 1.7E-37 281.3 11.3 149 445-596 41-229 (329)
54 4fih_A Serine/threonine-protei 100.0 4.8E-33 1.6E-37 281.2 10.8 145 445-596 74-239 (346)
55 2z80_A TOLL-like receptor 2, v 100.0 9E-32 3.1E-36 277.2 19.4 281 11-320 32-316 (353)
56 2z80_A TOLL-like receptor 2, v 100.0 1.1E-31 3.7E-36 276.6 19.1 279 34-348 31-319 (353)
57 2z66_A Variable lymphocyte rec 100.0 2E-31 6.7E-36 269.0 19.9 249 13-272 10-262 (306)
58 1z7x_W Ribonuclease inhibitor; 100.0 3.7E-34 1.3E-38 306.0 -0.1 337 6-345 24-413 (461)
59 3oja_A Leucine-rich immune mol 100.0 8.2E-33 2.8E-37 296.7 10.1 30 465-494 323-352 (487)
60 4fie_A Serine/threonine-protei 100.0 2.2E-32 7.5E-37 283.2 12.3 146 444-596 150-316 (423)
61 3fpq_A Serine/threonine-protei 100.0 3E-32 1E-36 269.9 11.4 141 448-596 29-199 (290)
62 4g3f_A NF-kappa-beta-inducing 100.0 1.6E-32 5.5E-37 276.5 8.9 149 444-596 57-225 (336)
63 3ubd_A Ribosomal protein S6 ki 100.0 6.7E-33 2.3E-37 275.9 5.8 146 445-596 24-195 (304)
64 3hyh_A Carbon catabolite-derep 100.0 3.7E-32 1.3E-36 266.9 10.8 144 445-596 13-180 (275)
65 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-30 4.7E-35 260.0 21.6 254 37-301 14-268 (285)
66 4ase_A Vascular endothelial gr 100.0 3.2E-32 1.1E-36 277.6 9.4 160 434-596 53-256 (353)
67 2z66_A Variable lymphocyte rec 100.0 9.7E-31 3.3E-35 263.9 18.9 279 36-348 9-292 (306)
68 4g31_A Eukaryotic translation 100.0 6.1E-32 2.1E-36 270.0 9.8 149 445-596 5-199 (299)
69 3zyi_A Leucine-rich repeat-con 100.0 5.4E-30 1.8E-34 272.9 24.3 247 35-294 55-303 (452)
70 3zyj_A Leucine-rich repeat-con 100.0 8E-30 2.7E-34 270.6 24.4 247 35-294 44-292 (440)
71 3o53_A Protein LRIM1, AGAP0063 100.0 5.4E-32 1.9E-36 274.5 7.1 257 36-313 12-270 (317)
72 3hmm_A TGF-beta receptor type- 100.0 3.6E-31 1.2E-35 265.7 11.1 150 445-596 3-181 (303)
73 3zyi_A Leucine-rich repeat-con 100.0 2.1E-29 7.3E-34 268.3 25.5 247 60-318 55-303 (452)
74 3g06_A SSPH2 (leucine-rich rep 100.0 3.9E-29 1.3E-33 273.8 27.7 263 10-323 40-302 (622)
75 3zyj_A Leucine-rich repeat-con 100.0 2.9E-29 1E-33 266.3 25.2 247 60-318 44-292 (440)
76 3o53_A Protein LRIM1, AGAP0063 100.0 1.2E-31 4.1E-36 271.9 5.7 266 60-346 11-279 (317)
77 1ozn_A Reticulon 4 receptor; N 100.0 1.6E-29 5.6E-34 252.2 19.9 254 61-349 13-267 (285)
78 1wwl_A Monocyte differentiatio 100.0 1.1E-30 3.9E-35 264.1 8.7 246 58-318 42-309 (312)
79 1wwl_A Monocyte differentiatio 100.0 4.1E-31 1.4E-35 267.4 5.4 249 9-295 42-310 (312)
80 4fcg_A Uncharacterized protein 100.0 3.2E-29 1.1E-33 255.0 19.3 234 58-318 80-314 (328)
81 4fcg_A Uncharacterized protein 100.0 7E-29 2.4E-33 252.5 20.8 230 33-271 80-314 (328)
82 3g06_A SSPH2 (leucine-rich rep 100.0 5.9E-28 2E-32 264.4 27.7 263 34-348 40-302 (622)
83 3oja_A Leucine-rich immune mol 100.0 1.6E-29 5.3E-34 271.2 13.2 236 58-313 33-270 (487)
84 3v5w_A G-protein coupled recep 100.0 1.5E-29 5E-34 273.8 12.3 145 444-596 188-359 (689)
85 4b99_A Mitogen-activated prote 100.0 2.2E-29 7.5E-34 261.2 10.5 147 445-596 54-231 (398)
86 4f9c_A Cell division cycle 7-r 100.0 3.4E-29 1.2E-33 257.0 11.1 131 439-576 15-169 (361)
87 3uto_A Twitchin; kinase, muscl 99.9 1.8E-28 6.2E-33 266.7 11.0 147 444-596 156-325 (573)
88 2z62_A TOLL-like receptor 4, v 99.9 1.2E-26 4.3E-31 230.2 21.0 225 13-249 10-239 (276)
89 2z62_A TOLL-like receptor 4, v 99.9 2.6E-26 8.9E-31 227.9 20.9 208 84-347 29-241 (276)
90 4aw2_A Serine/threonine-protei 99.9 9.4E-28 3.2E-32 252.8 8.4 157 436-596 65-245 (437)
91 3ogk_B Coronatine-insensitive 99.9 2.5E-28 8.4E-33 269.2 3.7 355 8-366 110-526 (592)
92 2o6q_A Variable lymphocyte rec 99.9 2.6E-25 8.9E-30 219.9 22.6 203 34-271 16-218 (270)
93 2o6q_A Variable lymphocyte rec 99.9 3E-25 1E-29 219.4 22.7 203 10-223 16-218 (270)
94 3rfs_A Internalin B, repeat mo 99.9 3.6E-26 1.2E-30 226.3 16.0 225 13-258 22-246 (272)
95 1p9a_G Platelet glycoprotein I 99.9 2.6E-25 9E-30 222.0 20.8 200 58-294 9-208 (290)
96 3ogk_B Coronatine-insensitive 99.9 6.6E-27 2.3E-31 257.8 7.8 329 8-345 162-528 (592)
97 2vd5_A DMPK protein; serine/th 99.9 2.3E-26 7.9E-31 240.5 11.2 156 437-596 53-232 (412)
98 3v8s_A RHO-associated protein 99.9 2.2E-26 7.4E-31 240.6 10.8 153 438-596 62-238 (410)
99 3goz_A Leucine-rich repeat-con 99.9 6.5E-27 2.2E-31 241.6 6.2 260 14-296 2-299 (362)
100 1p9a_G Platelet glycoprotein I 99.9 8.9E-25 3.1E-29 218.1 21.4 201 31-246 7-207 (290)
101 3rfs_A Internalin B, repeat mo 99.9 2.3E-25 7.8E-30 220.5 16.8 211 6-235 37-247 (272)
102 3s95_A LIMK-1, LIM domain kina 99.9 1E-25 3.6E-30 227.4 13.2 150 444-596 9-191 (310)
103 3fe3_A MAP/microtubule affinit 99.9 5.7E-26 2E-30 230.9 10.6 147 443-596 13-182 (328)
104 2psq_A Fibroblast growth facto 99.9 1.4E-25 4.7E-30 232.3 13.1 150 444-596 80-274 (370)
105 3e7e_A HBUB1, BUB1A, mitotic c 99.9 1.2E-25 4E-30 232.6 12.4 151 443-596 63-254 (365)
106 4fr4_A YANK1, serine/threonine 99.9 1.5E-25 5.1E-30 232.1 12.7 146 444-596 14-183 (384)
107 1o6l_A RAC-beta serine/threoni 99.9 1.6E-25 5.3E-30 228.4 12.6 147 444-596 4-174 (337)
108 3uim_A Brassinosteroid insensi 99.9 1.7E-25 5.9E-30 227.5 12.8 166 430-596 15-204 (326)
109 2qkw_B Protein kinase; three-h 99.9 8.9E-26 3E-30 229.1 10.2 159 435-596 29-210 (321)
110 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.4E-25 4.7E-30 230.4 11.4 148 443-596 21-193 (353)
111 1tki_A Titin; serine kinase, m 99.9 1.6E-25 5.4E-30 227.2 11.7 147 444-596 4-172 (321)
112 4dc2_A Protein kinase C IOTA t 99.9 1.3E-25 4.4E-30 233.4 11.2 148 443-596 50-222 (396)
113 3fxz_A Serine/threonine-protei 99.9 2.3E-25 7.8E-30 223.5 12.7 146 444-596 19-185 (297)
114 4glp_A Monocyte differentiatio 99.9 1.8E-25 6.3E-30 225.6 11.9 205 59-295 91-308 (310)
115 2nru_A Interleukin-1 receptor- 99.9 3.6E-25 1.2E-29 223.0 14.0 163 431-596 11-204 (307)
116 3zgw_A Maternal embryonic leuc 99.9 1.2E-25 3.9E-30 230.1 10.2 149 443-596 8-178 (347)
117 1fot_A TPK1 delta, CAMP-depend 99.9 3.4E-25 1.1E-29 224.3 13.2 144 444-596 5-172 (318)
118 2xwt_C Thyrotropin receptor; s 99.9 1.2E-24 4.2E-29 210.9 16.4 205 22-244 23-236 (239)
119 3goz_A Leucine-rich repeat-con 99.9 6.2E-26 2.1E-30 234.2 7.3 259 63-322 2-301 (362)
120 3kul_A Ephrin type-A receptor 99.9 2.4E-25 8.3E-30 226.3 11.4 150 444-596 48-223 (325)
121 3tki_A Serine/threonine-protei 99.9 1.3E-25 4.4E-30 228.1 9.2 149 444-596 6-176 (323)
122 3lb7_A RAF proto-oncogene seri 99.9 4.1E-25 1.4E-29 222.7 12.8 150 443-596 34-203 (307)
123 2ca6_A RAN GTPase-activating p 99.9 2.3E-26 7.8E-31 239.7 3.5 136 186-321 159-319 (386)
124 3soc_A Activin receptor type-2 99.9 2.5E-25 8.5E-30 225.9 10.9 149 443-596 22-202 (322)
125 3a8x_A Protein kinase C IOTA t 99.9 3.6E-25 1.2E-29 226.7 11.8 147 444-596 8-179 (345)
126 1xjd_A Protein kinase C, theta 99.9 3.8E-25 1.3E-29 226.2 12.0 149 442-596 14-187 (345)
127 2yab_A Death-associated protei 99.9 5.2E-25 1.8E-29 226.7 12.2 146 444-596 11-187 (361)
128 4eqm_A Protein kinase; transfe 99.9 3.2E-25 1.1E-29 222.1 10.3 148 444-596 10-181 (294)
129 3vhe_A Vascular endothelial gr 99.9 2.8E-25 9.7E-30 229.0 10.2 161 433-596 10-264 (359)
130 2qol_A Ephrin receptor; recept 99.9 4.2E-25 1.4E-29 228.7 11.5 150 444-596 44-219 (373)
131 3soa_A Calcium/calmodulin-depe 99.9 4.7E-25 1.6E-29 233.0 11.8 148 443-596 9-182 (444)
132 1rdq_E PKA C-alpha, CAMP-depen 99.9 5.6E-25 1.9E-29 225.6 12.0 144 444-596 40-207 (350)
133 3cbl_A C-FES, proto-oncogene t 99.9 2.3E-25 7.9E-30 231.2 9.0 152 442-596 111-284 (377)
134 2i0e_A Protein kinase C-beta I 99.9 6.2E-25 2.1E-29 225.4 12.1 148 443-596 18-190 (353)
135 2c30_A Serine/threonine-protei 99.9 8.3E-25 2.8E-29 221.9 12.7 157 433-596 23-210 (321)
136 3p86_A Serine/threonine-protei 99.9 2.9E-25 1E-29 224.0 9.3 153 439-596 31-208 (309)
137 3poz_A Epidermal growth factor 99.9 3.3E-25 1.1E-29 225.5 9.4 149 444-596 14-188 (327)
138 4glp_A Monocyte differentiatio 99.9 1.1E-24 3.7E-29 220.0 12.7 232 11-271 65-307 (310)
139 3tt0_A Basic fibroblast growth 99.9 8E-25 2.7E-29 227.6 11.8 151 443-596 67-262 (382)
140 1h6u_A Internalin H; cell adhe 99.9 5.1E-24 1.7E-28 214.7 17.2 195 58-275 40-234 (308)
141 3qd2_B Eukaryotic translation 99.9 8.3E-25 2.8E-29 222.7 11.5 150 444-596 5-245 (332)
142 3kex_A Receptor tyrosine-prote 99.9 3.5E-25 1.2E-29 225.2 8.6 149 444-596 12-186 (325)
143 2acx_A G protein-coupled recep 99.9 9.2E-25 3.1E-29 235.7 12.3 148 443-596 182-354 (576)
144 3niz_A Rhodanese family protei 99.9 9.7E-25 3.3E-29 220.4 11.6 148 443-596 19-188 (311)
145 1kob_A Twitchin; kinase, intra 99.9 1E-24 3.6E-29 226.4 12.1 147 444-596 50-219 (387)
146 2ca6_A RAN GTPase-activating p 99.9 9.1E-26 3.1E-30 235.2 4.0 264 60-346 10-319 (386)
147 4hcu_A Tyrosine-protein kinase 99.9 6.1E-25 2.1E-29 217.0 9.7 149 444-596 9-176 (269)
148 2p1m_B Transport inhibitor res 99.9 5.3E-26 1.8E-30 250.6 2.2 202 162-365 289-518 (594)
149 2xwt_C Thyrotropin receptor; s 99.9 4.5E-24 1.5E-28 206.9 15.6 196 137-340 32-236 (239)
150 3h4j_B AMPK kdaid, SNF1-like p 99.9 8.1E-25 2.8E-29 222.9 10.5 145 444-596 8-176 (336)
151 2r5t_A Serine/threonine-protei 99.9 5.6E-25 1.9E-29 227.3 9.4 147 444-596 37-208 (373)
152 2bdw_A Hypothetical protein K1 99.9 1.3E-24 4.3E-29 224.2 11.9 146 444-596 28-199 (362)
153 3l9p_A Anaplastic lymphoma kin 99.9 3.5E-25 1.2E-29 228.9 7.7 150 444-596 70-255 (367)
154 4ay9_X Follicle-stimulating ho 99.9 7.8E-24 2.7E-28 217.4 17.7 242 13-269 12-257 (350)
155 3c0i_A Peripheral plasma membr 99.9 8.3E-25 2.8E-29 224.8 10.2 148 444-596 23-202 (351)
156 3o0g_A Cell division protein k 99.9 1.4E-24 4.6E-29 217.3 11.4 146 445-596 2-170 (292)
157 3sxs_A Cytoplasmic tyrosine-pr 99.9 1.3E-24 4.4E-29 214.5 11.1 150 443-596 6-174 (268)
158 2ast_B S-phase kinase-associat 99.9 7.6E-25 2.6E-29 223.6 9.7 234 59-303 70-315 (336)
159 3c4z_A Rhodopsin kinase; Ser/T 99.9 2E-24 7E-29 232.4 13.2 148 444-596 184-358 (543)
160 2y0a_A Death-associated protei 99.9 1.9E-24 6.4E-29 219.8 12.2 146 444-596 10-186 (326)
161 3a62_A Ribosomal protein S6 ki 99.9 8.7E-25 3E-29 222.4 9.7 147 444-596 16-190 (327)
162 2ivs_A Proto-oncogene tyrosine 99.9 9.6E-25 3.3E-29 220.6 9.8 151 443-596 21-221 (314)
163 1luf_A Muscle-specific tyrosin 99.9 6.3E-25 2.2E-29 224.9 8.6 154 440-596 42-245 (343)
164 2ast_B S-phase kinase-associat 99.9 1.5E-24 5.1E-29 221.5 10.7 249 85-349 49-312 (336)
165 3rp9_A Mitogen-activated prote 99.9 1.3E-24 4.6E-29 231.6 10.7 148 444-596 52-252 (458)
166 2y94_A 5'-AMP-activated protei 99.9 2.2E-24 7.6E-29 229.4 12.3 146 444-596 15-184 (476)
167 2pmi_A Negative RE, cyclin-dep 99.9 2.2E-24 7.4E-29 218.5 11.6 147 444-596 4-177 (317)
168 1rjb_A FL cytokine receptor; k 99.9 1.2E-24 4E-29 223.1 9.6 154 440-596 40-243 (344)
169 2zv2_A Calcium/calmodulin-depe 99.9 1.6E-24 5.3E-29 217.5 10.3 147 443-596 11-206 (298)
170 2x4f_A Myosin light chain kina 99.9 1.8E-24 6E-29 224.0 10.7 144 447-596 91-257 (373)
171 4ejn_A RAC-alpha serine/threon 99.9 6.7E-25 2.3E-29 233.0 7.8 148 443-596 146-318 (446)
172 2izr_A Casein kinase I isoform 99.9 2E-24 6.9E-29 220.0 10.7 149 444-596 8-186 (330)
173 3p1a_A MYT1 kinase, membrane-a 99.9 7E-25 2.4E-29 221.5 7.2 145 445-596 57-225 (311)
174 3gen_A Tyrosine-protein kinase 99.9 1.7E-24 5.7E-29 215.5 9.9 151 442-596 21-190 (283)
175 3uc3_A Serine/threonine-protei 99.9 1.7E-24 5.8E-29 223.2 10.3 146 444-596 19-186 (361)
176 1ob3_A PFPK5, cell division co 99.9 1.2E-24 4.1E-29 217.2 8.8 146 445-596 2-169 (288)
177 1p4o_A Insulin-like growth fac 99.9 8.9E-25 3E-29 221.8 8.0 159 435-596 15-209 (322)
178 1mp8_A Focal adhesion kinase 1 99.9 1.4E-24 4.9E-29 215.8 8.6 149 443-596 13-186 (281)
179 2i1m_A Macrophage colony-stimu 99.9 8.6E-25 2.9E-29 223.0 7.0 154 440-596 41-235 (333)
180 3m19_A Variable lymphocyte rec 99.9 4.7E-23 1.6E-27 201.3 19.0 177 35-222 15-191 (251)
181 4ay9_X Follicle-stimulating ho 99.9 9.5E-24 3.2E-28 216.8 14.7 229 1-244 23-256 (350)
182 4euu_A Serine/threonine-protei 99.9 3.5E-24 1.2E-28 217.1 11.3 147 444-596 8-184 (319)
183 3og7_A AKAP9-BRAF fusion prote 99.9 1.7E-24 5.7E-29 216.3 8.5 150 443-596 22-191 (289)
184 3lzb_A Epidermal growth factor 99.9 1.9E-24 6.5E-29 219.9 9.1 149 444-596 14-188 (327)
185 1opk_A P150, C-ABL, proto-onco 99.9 3E-24 1E-28 230.7 11.0 151 442-596 217-388 (495)
186 1t46_A HOMO sapiens V-KIT hard 99.9 2.7E-24 9.3E-29 217.1 9.9 151 443-596 21-216 (313)
187 1h6u_A Internalin H; cell adhe 99.9 4.1E-23 1.4E-27 208.0 18.5 208 15-248 24-231 (308)
188 3ugc_A Tyrosine-protein kinase 99.9 1.4E-24 4.8E-29 217.5 7.6 150 444-596 9-186 (295)
189 3f3z_A Calcium/calmodulin-depe 99.9 5.4E-24 1.8E-28 211.1 11.6 146 444-596 8-177 (277)
190 4fvq_A Tyrosine-protein kinase 99.9 2E-24 6.8E-29 215.6 8.4 144 444-596 7-186 (289)
191 3f66_A Hepatocyte growth facto 99.9 3.6E-24 1.2E-28 214.7 10.1 150 444-596 24-201 (298)
192 3pfq_A PKC-B, PKC-beta, protei 99.9 6.7E-24 2.3E-28 235.7 13.2 148 443-596 339-511 (674)
193 3kn6_A Ribosomal protein S6 ki 99.9 4.5E-24 1.5E-28 216.9 10.8 141 450-596 16-178 (325)
194 3n9x_A Phosphotransferase; mal 99.9 3.7E-24 1.3E-28 226.2 10.6 148 444-596 25-220 (432)
195 3cok_A Serine/threonine-protei 99.9 7.2E-24 2.5E-28 210.3 12.0 149 443-596 9-181 (278)
196 2pvf_A Fibroblast growth facto 99.9 8.8E-24 3E-28 215.7 12.5 151 443-596 33-228 (334)
197 3m19_A Variable lymphocyte rec 99.9 6.8E-23 2.3E-27 200.2 18.3 158 162-319 35-193 (251)
198 2qr7_A Ribosomal protein S6 ki 99.9 4.1E-24 1.4E-28 218.5 9.9 148 443-596 20-189 (342)
199 4e5w_A Tyrosine-protein kinase 99.9 6.3E-24 2.2E-28 213.4 11.0 149 445-596 21-198 (302)
200 2w4o_A Calcium/calmodulin-depe 99.9 3.3E-24 1.1E-28 220.0 9.1 147 443-596 51-219 (349)
201 3fdn_A Serine/threonine-protei 99.9 6.8E-24 2.3E-28 210.7 11.0 146 443-596 7-176 (279)
202 1u5q_A Serine/threonine protei 99.9 4.7E-24 1.6E-28 218.8 10.0 143 444-596 53-219 (348)
203 3dls_A PAS domain-containing s 99.9 4.6E-24 1.6E-28 217.7 9.9 147 443-596 22-198 (335)
204 3q4u_A Activin receptor type-1 99.9 8.8E-24 3E-28 212.1 11.7 151 444-596 7-186 (301)
205 3qup_A Tyrosine-protein kinase 99.9 1.7E-24 5.8E-29 219.8 6.5 153 441-596 19-208 (323)
206 3ork_A Serine/threonine protei 99.9 1.5E-24 5.3E-29 219.0 6.1 149 444-596 11-188 (311)
207 3c1x_A Hepatocyte growth facto 99.9 3.7E-24 1.3E-28 221.5 8.9 149 445-596 89-265 (373)
208 3is5_A Calcium-dependent prote 99.9 6.4E-24 2.2E-28 211.6 10.1 146 445-596 22-195 (285)
209 1k9a_A Carboxyl-terminal SRC k 99.9 8.8E-24 3E-28 224.5 11.6 147 442-596 190-355 (450)
210 2xir_A Vascular endothelial gr 99.9 4.2E-24 1.4E-28 216.0 8.6 160 434-596 16-219 (316)
211 3kfa_A Tyrosine-protein kinase 99.9 2.6E-24 8.8E-29 214.7 6.9 154 439-596 7-181 (288)
212 3gni_B Strad alpha; kinase fol 99.9 9.1E-24 3.1E-28 220.3 11.3 150 444-596 24-204 (389)
213 3oz6_A Mitogen-activated prote 99.9 7.9E-24 2.7E-28 220.6 10.8 148 443-596 7-199 (388)
214 3op5_A Serine/threonine-protei 99.9 5.2E-24 1.8E-28 220.0 9.2 150 443-596 33-230 (364)
215 1qcf_A Haematopoetic cell kina 99.9 2.6E-24 8.8E-29 228.9 7.0 153 439-596 182-354 (454)
216 1mqb_A Ephrin type-A receptor 99.9 7.6E-24 2.6E-28 216.0 10.2 150 444-596 43-219 (333)
217 3lij_A Calcium/calmodulin depe 99.9 1.1E-23 3.6E-28 226.8 11.5 146 444-596 36-207 (494)
218 2rku_A Serine/threonine-protei 99.9 1.7E-23 5.7E-28 209.5 12.0 147 444-596 14-184 (294)
219 2owb_A Serine/threonine-protei 99.9 1.5E-23 5.2E-28 214.0 11.8 147 444-596 40-210 (335)
220 3mtl_A Cell division protein k 99.9 3.4E-24 1.2E-28 217.7 6.9 146 445-596 2-169 (324)
221 4agu_A Cyclin-dependent kinase 99.9 9.3E-24 3.2E-28 213.1 9.9 146 445-596 3-171 (311)
222 3pls_A Macrophage-stimulating 99.9 9.2E-24 3.2E-28 211.7 9.8 148 446-596 22-197 (298)
223 4f0f_A Serine/threonine-protei 99.9 2.5E-23 8.6E-28 207.4 12.9 143 444-596 18-195 (287)
224 2yex_A Serine/threonine-protei 99.9 8.6E-24 2.9E-28 209.4 9.4 149 444-596 6-176 (276)
225 2a2a_A Death-associated protei 99.9 1.5E-23 5E-28 212.8 11.2 146 444-596 11-187 (321)
226 3dbq_A Dual specificity protei 99.9 9.2E-24 3.1E-28 216.4 9.7 147 444-596 8-178 (343)
227 3t9t_A Tyrosine-protein kinase 99.9 8E-24 2.7E-28 208.5 8.9 149 444-596 7-174 (267)
228 1ua2_A CAK, cell division prot 99.9 7.9E-24 2.7E-28 217.1 9.2 149 442-596 7-181 (346)
229 3hko_A Calcium/calmodulin-depe 99.9 7.4E-24 2.5E-28 217.1 8.8 153 441-596 22-243 (345)
230 3mwu_A Calmodulin-domain prote 99.9 1.4E-23 4.7E-28 225.4 11.3 146 444-596 21-192 (486)
231 3llt_A Serine/threonine kinase 99.9 9.6E-24 3.3E-28 217.7 9.7 157 431-596 21-228 (360)
232 1vzo_A Ribosomal protein S6 ki 99.9 5.1E-24 1.7E-28 219.2 7.6 148 444-596 53-229 (355)
233 1csn_A Casein kinase-1; phosph 99.9 2.5E-23 8.6E-28 208.5 12.4 149 444-596 9-187 (298)
234 3kk8_A Calcium/calmodulin depe 99.9 2.4E-23 8.2E-28 207.2 12.1 146 444-596 5-176 (284)
235 2zmd_A Dual specificity protei 99.9 1.4E-23 4.9E-28 218.6 10.9 146 445-596 56-225 (390)
236 2eue_A Carbon catabolite derep 99.9 1.4E-23 4.8E-28 207.9 10.2 145 444-596 12-180 (275)
237 4eut_A Serine/threonine-protei 99.9 8.9E-24 3.1E-28 220.8 9.2 147 444-596 8-184 (396)
238 3mdy_A Bone morphogenetic prot 99.9 2.5E-23 8.6E-28 212.3 12.3 150 442-596 34-215 (337)
239 1nxk_A MAP kinase-activated pr 99.9 1E-23 3.6E-28 220.3 9.7 147 444-596 60-232 (400)
240 3i6u_A CDS1, serine/threonine- 99.9 9.3E-24 3.2E-28 222.2 9.3 146 443-596 133-310 (419)
241 2vgo_A Serine/threonine-protei 99.9 2.6E-23 8.8E-28 207.0 11.8 145 444-596 13-181 (284)
242 3lxl_A Tyrosine-protein kinase 99.9 1.7E-23 5.7E-28 212.9 10.4 150 444-596 22-199 (327)
243 3kmu_A ILK, integrin-linked ki 99.9 1.6E-23 5.5E-28 206.7 9.9 143 444-596 9-177 (271)
244 3q5i_A Protein kinase; CDPK, m 99.9 2.8E-23 9.5E-28 224.0 12.4 146 444-596 35-217 (504)
245 2p1m_B Transport inhibitor res 99.9 4.3E-25 1.5E-29 243.4 -1.9 332 8-344 128-520 (594)
246 1zy4_A Serine/threonine-protei 99.9 1.5E-23 5.2E-28 210.4 9.5 150 444-596 5-199 (303)
247 3mi9_A Cell division protein k 99.9 2.7E-23 9.3E-28 213.5 11.6 149 444-596 16-197 (351)
248 4azs_A Methyltransferase WBDD; 99.9 1.1E-23 3.7E-28 229.1 9.0 123 465-596 285-408 (569)
249 2eva_A TAK1 kinase - TAB1 chim 99.9 2.5E-23 8.4E-28 209.7 10.9 146 444-596 7-172 (307)
250 3nyv_A Calmodulin-domain prote 99.9 1.3E-23 4.5E-28 225.6 9.5 146 444-596 25-197 (484)
251 3g33_A Cell division protein k 99.9 3.9E-23 1.3E-27 208.3 12.3 147 443-596 7-188 (308)
252 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 5.2E-24 1.8E-28 226.4 6.1 152 440-596 179-350 (452)
253 1cm8_A Phosphorylated MAP kina 99.9 1.9E-23 6.5E-28 215.9 10.2 142 444-596 24-194 (367)
254 1fvr_A Tyrosine-protein kinase 99.9 2.1E-23 7.3E-28 212.1 10.3 147 444-596 24-210 (327)
255 2vuw_A Serine/threonine-protei 99.9 1.7E-24 5.6E-29 221.2 2.0 142 444-596 19-246 (336)
256 2yfx_A Tyrosine-protein kinase 99.9 1.5E-23 5.2E-28 213.2 9.1 150 444-596 29-214 (327)
257 3cc6_A Protein tyrosine kinase 99.9 1.8E-23 6E-28 207.9 9.4 149 443-596 10-183 (281)
258 3g2f_A Bone morphogenetic prot 99.9 3.6E-23 1.2E-27 211.2 11.8 149 443-596 11-197 (336)
259 1x8b_A WEE1HU, WEE1-like prote 99.9 2.6E-23 8.9E-28 207.1 10.5 144 444-596 10-199 (289)
260 3brb_A Proto-oncogene tyrosine 99.9 2.7E-23 9.1E-28 210.0 10.6 154 440-596 29-218 (313)
261 3ttj_A Mitogen-activated prote 99.9 1.4E-23 4.7E-28 223.5 8.8 143 444-596 61-232 (464)
262 3eb0_A Putative uncharacterize 99.9 2.1E-23 7.3E-28 217.0 10.0 149 441-596 3-210 (383)
263 1qpc_A LCK kinase; alpha beta 99.9 1.3E-23 4.3E-28 208.7 7.9 152 440-596 8-179 (279)
264 1t4h_A Serine/threonine-protei 99.9 4.3E-23 1.5E-27 206.1 11.8 143 446-596 27-199 (290)
265 1u59_A Tyrosine-protein kinase 99.9 3.1E-23 1.1E-27 206.8 10.8 149 444-596 8-182 (287)
266 3com_A Serine/threonine-protei 99.9 3.5E-23 1.2E-27 209.2 11.2 149 443-596 27-194 (314)
267 2a19_B Interferon-induced, dou 99.9 2E-23 6.9E-28 207.6 9.3 147 444-596 10-190 (284)
268 3dtc_A Mitogen-activated prote 99.9 2.1E-23 7.1E-28 206.1 9.2 144 444-596 6-183 (271)
269 3gxj_A TGF-beta receptor type- 99.9 6.1E-24 2.1E-28 213.4 5.4 150 445-596 3-181 (303)
270 2ac3_A MAP kinase-interacting 99.9 4.2E-23 1.4E-27 208.8 11.5 148 445-596 12-190 (316)
271 3pg1_A Mitogen-activated prote 99.9 2.8E-23 9.7E-28 214.3 10.3 154 436-596 13-202 (362)
272 2y7j_A Phosphorylase B kinase 99.9 5.1E-23 1.7E-27 212.6 12.2 151 439-596 88-268 (365)
273 3bhy_A Death-associated protei 99.9 4.4E-23 1.5E-27 205.2 11.1 145 445-596 5-180 (283)
274 3eqc_A Dual specificity mitoge 99.9 1.7E-23 5.7E-28 215.9 8.2 145 444-596 32-199 (360)
275 2ozo_A Tyrosine-protein kinase 99.9 2.5E-23 8.6E-28 228.9 9.8 147 446-596 336-508 (613)
276 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.6E-23 5.5E-28 213.2 7.6 149 441-596 30-206 (329)
277 4aaa_A Cyclin-dependent kinase 99.9 2.7E-23 9.3E-28 211.7 9.2 147 444-596 24-193 (331)
278 2j7t_A Serine/threonine-protei 99.9 1.5E-23 5E-28 210.7 7.0 149 443-596 17-186 (302)
279 2vwi_A Serine/threonine-protei 99.9 1.8E-23 6.2E-28 209.9 7.6 153 441-596 11-195 (303)
280 3a7i_A MST3 kinase, serine/thr 99.9 6.8E-23 2.3E-27 206.0 11.5 146 444-596 21-188 (303)
281 2h6d_A 5'-AMP-activated protei 99.9 6.3E-23 2.2E-27 203.2 11.1 146 444-596 10-179 (276)
282 2h34_A Serine/threonine-protei 99.9 5E-23 1.7E-27 207.7 10.4 148 444-596 33-204 (309)
283 2j0j_A Focal adhesion kinase 1 99.9 3.6E-23 1.2E-27 229.2 10.2 151 441-596 386-561 (656)
284 3lxp_A Non-receptor tyrosine-p 99.9 1.2E-22 4.1E-27 205.8 12.9 145 447-596 33-206 (318)
285 1xbb_A Tyrosine-protein kinase 99.9 4.3E-23 1.5E-27 206.2 9.4 149 443-596 14-189 (291)
286 2wqm_A Serine/threonine-protei 99.9 6E-23 2.1E-27 207.1 10.5 149 443-596 30-205 (310)
287 2h8h_A Proto-oncogene tyrosine 99.9 9.1E-24 3.1E-28 229.1 4.7 152 440-596 262-433 (535)
288 2w1i_A JAK2; chromosomal rearr 99.9 8E-23 2.7E-27 207.8 11.3 150 444-596 40-217 (326)
289 2v62_A Serine/threonine-protei 99.9 2.8E-23 9.4E-28 213.0 7.8 148 444-596 36-229 (345)
290 1u46_A ACK-1, activated CDC42 99.9 5.4E-23 1.9E-27 205.3 9.6 149 444-596 17-193 (291)
291 2pml_X PFPK7, Ser/Thr protein 99.9 5E-23 1.7E-27 211.2 9.5 146 444-596 30-219 (348)
292 2wtk_C Serine/threonine-protei 99.9 1E-22 3.5E-27 204.8 11.6 149 444-596 4-180 (305)
293 2x7f_A TRAF2 and NCK-interacti 99.9 2.1E-23 7.1E-28 212.0 6.1 157 435-596 14-198 (326)
294 3nsz_A CK II alpha, casein kin 99.9 1.2E-22 4.1E-27 206.7 11.6 143 444-596 35-199 (330)
295 1phk_A Phosphorylase kinase; g 99.9 1.5E-22 5E-27 202.9 11.9 147 443-596 15-192 (298)
296 2jam_A Calcium/calmodulin-depe 99.9 8E-23 2.7E-27 205.6 9.8 145 444-596 8-176 (304)
297 2clq_A Mitogen-activated prote 99.9 1.2E-22 4.2E-27 203.1 11.0 147 445-596 22-192 (295)
298 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.2E-23 4.1E-28 213.0 3.7 155 438-596 26-203 (319)
299 1b6c_B TGF-B superfamily recep 99.9 2.2E-22 7.5E-27 205.8 13.1 154 441-596 38-220 (342)
300 2ycf_A Serine/threonine-protei 99.9 6.7E-23 2.3E-27 208.0 9.0 145 444-596 9-185 (322)
301 3qyz_A Mitogen-activated prote 99.9 9.5E-23 3.3E-27 210.6 10.3 147 444-596 26-200 (364)
302 2w5a_A Serine/threonine-protei 99.9 3.5E-23 1.2E-27 205.4 6.6 148 444-596 5-185 (279)
303 2r3i_A Cell division protein k 99.9 9.1E-23 3.1E-27 204.5 9.7 146 445-596 3-172 (299)
304 2buj_A Serine/threonine-protei 99.9 7.1E-23 2.4E-27 207.2 8.9 150 444-596 28-212 (317)
305 4e7w_A Glycogen synthase kinas 99.9 5E-23 1.7E-27 214.8 7.6 146 444-596 39-210 (394)
306 4fl3_A Tyrosine-protein kinase 99.9 7.3E-23 2.5E-27 225.8 9.3 141 451-596 375-541 (635)
307 3fme_A Dual specificity mitoge 99.9 8.6E-23 2.9E-27 203.7 8.6 147 443-596 5-178 (290)
308 3byv_A Rhoptry kinase; malaria 99.9 3E-23 1E-27 215.4 5.4 144 443-596 71-271 (377)
309 3lm5_A Serine/threonine-protei 99.9 1E-22 3.6E-27 207.0 9.0 153 438-596 21-202 (327)
310 3cvr_A Invasion plasmid antige 99.9 7.1E-22 2.4E-26 213.7 15.9 188 35-258 60-254 (571)
311 1j1b_A Glycogen synthase kinas 99.9 9.2E-23 3.2E-27 214.6 8.8 146 444-596 53-225 (420)
312 1byg_A CSK, protein (C-termina 99.9 5.8E-23 2E-27 203.8 6.7 145 444-596 20-183 (278)
313 2xrw_A Mitogen-activated prote 99.9 1.4E-22 4.8E-27 209.8 9.8 143 444-596 24-195 (371)
314 2fst_X Mitogen-activated prote 99.9 6.2E-23 2.1E-27 211.9 7.0 142 444-596 28-198 (367)
315 4hgt_A Casein kinase I isoform 99.9 2.3E-22 7.8E-27 201.2 10.7 150 443-596 7-184 (296)
316 3an0_A Dual specificity mitoge 99.9 1.1E-22 3.7E-27 208.1 8.4 148 442-596 48-222 (340)
317 2o6s_A Variable lymphocyte rec 99.9 2E-21 6.7E-26 184.0 16.3 180 37-258 10-189 (208)
318 3rgf_A Cyclin-dependent kinase 99.9 1.4E-22 4.9E-27 212.3 9.3 148 445-596 20-204 (405)
319 3cvr_A Invasion plasmid antige 99.9 2.6E-21 8.7E-26 209.4 18.3 149 136-306 100-255 (571)
320 2b9h_A MAP kinase FUS3, mitoge 99.9 3.1E-22 1.1E-26 205.7 10.6 147 444-596 10-191 (353)
321 3ll6_A Cyclin G-associated kin 99.9 3.4E-22 1.2E-26 203.8 10.6 150 443-596 26-219 (337)
322 2o6s_A Variable lymphocyte rec 99.9 2.1E-21 7.1E-26 183.9 15.3 181 13-211 10-190 (208)
323 2jii_A Serine/threonine-protei 99.9 8.1E-23 2.8E-27 210.1 5.9 148 445-596 42-237 (352)
324 3sv0_A Casein kinase I-like; t 99.9 4.8E-22 1.6E-26 211.8 11.7 149 444-596 6-182 (483)
325 2pzi_A Probable serine/threoni 99.9 1.6E-22 5.5E-27 225.9 8.2 140 444-596 79-246 (681)
326 3kvw_A DYRK2, dual specificity 99.9 3.9E-22 1.3E-26 210.4 10.7 144 444-596 96-268 (429)
327 3uzp_A CKI-delta, CKID, casein 99.9 5E-22 1.7E-26 198.8 10.6 149 444-596 8-184 (296)
328 4exu_A Mitogen-activated prote 99.9 2.8E-22 9.6E-27 207.5 8.7 141 444-596 41-210 (371)
329 3q60_A ROP5B; pseudokinase, tr 99.9 1.2E-22 4E-27 210.5 5.6 144 444-596 61-260 (371)
330 2i6l_A Mitogen-activated prote 99.9 4.9E-22 1.7E-26 201.0 10.0 147 444-596 10-193 (320)
331 2wei_A Calmodulin-domain prote 99.9 4.4E-22 1.5E-26 198.4 9.3 146 444-596 21-192 (287)
332 3en9_A Glycoprotease, O-sialog 99.9 1.6E-22 5.5E-27 218.7 6.2 135 448-596 339-505 (540)
333 1blx_A Cyclin-dependent kinase 99.9 6.6E-22 2.2E-26 200.9 10.1 148 442-596 8-188 (326)
334 3cek_A Dual specificity protei 99.9 1.7E-22 5.8E-27 204.1 5.7 155 436-596 19-197 (313)
335 3qa8_A MGC80376 protein; kinas 99.9 9E-22 3.1E-26 214.6 11.2 147 444-596 13-192 (676)
336 1wak_A Serine/threonine-protei 99.9 5.2E-22 1.8E-26 207.3 8.9 144 444-596 36-262 (397)
337 3e3p_A Protein kinase, putativ 99.9 1.2E-21 4E-26 202.0 11.3 154 438-596 16-200 (360)
338 3p23_A Serine/threonine-protei 99.9 3.4E-22 1.2E-26 210.8 6.9 150 443-596 22-195 (432)
339 1z57_A Dual specificity protei 99.8 9.3E-22 3.2E-26 200.6 9.7 144 444-596 13-203 (339)
340 2iwi_A Serine/threonine-protei 99.8 3E-22 1E-26 202.1 6.0 150 439-596 25-207 (312)
341 3coi_A Mitogen-activated prote 99.8 5.9E-22 2E-26 203.7 7.9 141 444-596 23-192 (353)
342 3a99_A Proto-oncogene serine/t 99.8 6.8E-22 2.3E-26 200.4 7.9 148 441-596 39-217 (320)
343 3fhr_A MAP kinase-activated pr 99.8 1.4E-21 4.9E-26 199.3 9.6 146 444-596 27-198 (336)
344 1h6t_A Internalin B; cell adhe 99.8 8.5E-21 2.9E-25 189.4 14.6 190 60-295 25-214 (291)
345 3aln_A Dual specificity mitoge 99.8 1.6E-21 5.5E-26 198.2 9.2 146 444-596 21-194 (327)
346 2xot_A Amphoterin-induced prot 99.8 1.1E-20 3.8E-25 194.7 15.5 175 139-318 21-202 (361)
347 2eu9_A Dual specificity protei 99.8 2.4E-21 8.3E-26 198.9 10.0 144 444-596 18-208 (355)
348 1h6t_A Internalin B; cell adhe 99.8 9.8E-21 3.3E-25 189.0 13.5 166 36-223 26-191 (291)
349 2rio_A Serine/threonine-protei 99.8 1.4E-21 4.9E-26 206.4 7.6 147 446-596 16-201 (434)
350 2dyl_A Dual specificity mitoge 99.8 2.7E-21 9.4E-26 195.5 8.6 147 443-596 23-193 (318)
351 2vx3_A Dual specificity tyrosi 99.8 5.1E-21 1.7E-25 198.9 10.7 149 441-596 50-227 (382)
352 1m9s_A Internalin B; cell inva 99.8 1.4E-20 4.9E-25 205.7 14.6 169 58-247 42-210 (605)
353 2v9t_B SLIT homolog 2 protein 99.8 7.4E-21 2.5E-25 181.6 10.6 154 165-345 14-167 (220)
354 1m9s_A Internalin B; cell inva 99.8 1.8E-20 6.3E-25 204.8 14.7 191 11-225 22-212 (605)
355 2xot_A Amphoterin-induced prot 99.8 2.4E-20 8.2E-25 192.2 14.4 176 37-247 21-202 (361)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-20 3.5E-25 180.7 10.7 153 164-319 13-167 (220)
357 1q8y_A SR protein kinase; tran 99.8 3.2E-21 1.1E-25 199.7 7.0 144 444-596 18-204 (373)
358 3m2w_A MAP kinase-activated pr 99.8 1.3E-20 4.6E-25 188.9 10.4 131 444-577 16-172 (299)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 1.2E-19 4E-24 173.3 16.1 132 164-295 34-167 (220)
360 3uqc_A Probable conserved tran 99.8 1.4E-20 4.9E-25 187.3 9.6 123 445-573 31-177 (286)
361 3e6j_A Variable lymphocyte rec 99.8 1.6E-19 5.4E-24 173.5 16.1 155 163-320 20-174 (229)
362 1dce_A Protein (RAB geranylger 99.8 5.4E-23 1.9E-27 223.5 -9.8 138 164-312 425-567 (567)
363 2v9t_B SLIT homolog 2 protein 99.8 2.1E-19 7E-24 171.6 15.9 152 37-223 14-165 (220)
364 1xeu_A Internalin C; cellular 99.8 3E-20 1E-24 182.5 6.2 170 33-225 18-187 (263)
365 3e6j_A Variable lymphocyte rec 99.8 1.2E-18 4.2E-23 167.3 17.1 153 36-224 21-173 (229)
366 4ezg_A Putative uncharacterize 99.8 6.8E-19 2.3E-23 165.0 14.3 149 162-317 44-193 (197)
367 3sb4_A Hypothetical leucine ri 99.8 2.7E-19 9.1E-24 181.9 12.0 287 9-311 24-327 (329)
368 1xeu_A Internalin C; cellular 99.8 3.1E-19 1.1E-23 175.3 10.6 168 163-345 20-187 (263)
369 1w8a_A SLIT protein; signaling 99.8 9.6E-19 3.3E-23 163.2 11.8 177 165-371 11-188 (192)
370 3sb4_A Hypothetical leucine ri 99.8 2.8E-19 9.6E-24 181.8 8.7 286 33-337 24-328 (329)
371 4ezg_A Putative uncharacterize 99.8 1.9E-18 6.4E-23 162.0 13.7 151 136-295 44-195 (197)
372 1dce_A Protein (RAB geranylger 99.8 1.2E-20 4.1E-25 205.1 -1.9 181 133-320 346-548 (567)
373 4b8c_D Glucose-repressible alc 99.8 2.4E-19 8.4E-24 200.8 8.1 162 168-340 207-369 (727)
374 1w8a_A SLIT protein; signaling 99.8 3.9E-18 1.3E-22 159.1 13.2 133 13-153 11-143 (192)
375 4fdw_A Leucine rich hypothetic 99.8 1E-16 3.5E-21 166.7 24.2 245 9-274 112-361 (401)
376 3dzo_A Rhoptry kinase domain; 99.8 4.3E-19 1.5E-23 186.1 6.4 144 443-596 76-276 (413)
377 4b8c_D Glucose-repressible alc 99.7 6.2E-19 2.1E-23 197.5 7.0 215 10-247 173-404 (727)
378 2ell_A Acidic leucine-rich nuc 99.7 1.6E-17 5.6E-22 151.3 10.6 131 186-318 24-160 (168)
379 4fdw_A Leucine rich hypothetic 99.7 3.9E-16 1.3E-20 162.2 21.8 249 5-273 131-385 (401)
380 2ell_A Acidic leucine-rich nuc 99.7 2.3E-17 7.8E-22 150.3 10.8 130 163-294 25-160 (168)
381 1zar_A RIO2 kinase; serine kin 99.7 6.3E-18 2.2E-22 167.4 6.7 122 439-576 84-243 (282)
382 2je0_A Acidic leucine-rich nuc 99.7 3.8E-17 1.3E-21 145.7 9.6 111 162-274 17-129 (149)
383 2je0_A Acidic leucine-rich nuc 99.7 6.1E-17 2.1E-21 144.3 10.6 128 185-314 16-149 (149)
384 2wfh_A SLIT homolog 2 protein 99.7 4E-16 1.4E-20 145.4 13.8 128 13-150 13-140 (193)
385 2wfh_A SLIT homolog 2 protein 99.7 6.6E-16 2.3E-20 143.9 13.6 107 163-270 32-138 (193)
386 2o6r_A Variable lymphocyte rec 99.6 1.3E-15 4.5E-20 139.9 13.8 110 186-295 28-138 (177)
387 2o6r_A Variable lymphocyte rec 99.6 1.7E-15 5.8E-20 139.1 14.3 132 138-274 9-140 (177)
388 1a9n_A U2A', U2A'; complex (nu 99.6 2.7E-16 9.2E-21 144.4 8.9 110 182-294 15-126 (176)
389 1ds9_A Outer arm dynein; leuci 99.6 5.8E-18 2E-22 158.8 -3.5 133 205-343 43-185 (198)
390 1ds9_A Outer arm dynein; leuci 99.6 1.6E-17 5.5E-22 155.7 -2.8 150 163-319 19-186 (198)
391 1a9n_A U2A', U2A'; complex (nu 99.6 1.6E-15 5.5E-20 139.2 10.3 132 132-293 15-152 (176)
392 4fs7_A Uncharacterized protein 99.6 3.3E-14 1.1E-18 148.0 21.6 309 6-340 67-376 (394)
393 1zth_A RIO1 serine protein kin 99.5 1.1E-15 3.8E-20 149.4 2.8 119 446-576 48-220 (258)
394 4fs7_A Uncharacterized protein 99.5 3.8E-13 1.3E-17 140.0 20.9 317 22-363 59-376 (394)
395 3g39_A Variable lymphocyte rec 99.5 4.7E-14 1.6E-18 128.5 10.7 106 164-272 11-116 (170)
396 3g39_A Variable lymphocyte rec 99.5 7.5E-14 2.6E-18 127.1 11.9 107 36-151 11-117 (170)
397 2r9u_A Variable lymphocyte rec 99.5 5.7E-14 2E-18 128.4 10.7 90 186-275 33-122 (174)
398 2r9u_A Variable lymphocyte rec 99.5 1.8E-13 6.1E-18 125.1 12.2 105 37-150 15-119 (174)
399 4gt6_A Cell surface protein; l 99.4 8.8E-12 3E-16 129.6 23.3 298 25-342 54-369 (394)
400 3un9_A NLR family member X1; l 99.4 2.6E-15 9E-20 154.5 -5.0 116 34-150 72-197 (372)
401 4gt6_A Cell surface protein; l 99.4 2.7E-11 9.1E-16 126.0 24.7 315 5-342 58-390 (394)
402 3un9_A NLR family member X1; l 99.4 2.7E-14 9.2E-19 146.9 1.1 15 304-318 238-252 (372)
403 4gyi_A RIO2 kinase; protein ki 99.4 4.4E-14 1.5E-18 143.7 1.2 119 447-575 97-265 (397)
404 2ifg_A High affinity nerve gro 99.3 2.5E-12 8.6E-17 131.3 9.9 105 189-295 11-117 (347)
405 2ifg_A High affinity nerve gro 99.3 4.6E-12 1.6E-16 129.3 11.8 102 39-149 13-116 (347)
406 4h09_A Hypothetical leucine ri 99.2 1.7E-09 5.7E-14 111.7 22.2 300 7-340 43-343 (379)
407 4h09_A Hypothetical leucine ri 99.2 4E-09 1.4E-13 108.8 23.2 284 5-329 64-355 (379)
408 2ra8_A Uncharacterized protein 98.9 1.2E-09 4.1E-14 111.4 8.3 179 136-318 107-320 (362)
409 2ra8_A Uncharacterized protein 98.9 7.2E-10 2.5E-14 113.0 5.9 82 233-316 251-341 (362)
410 3tm0_A Aminoglycoside 3'-phosp 98.9 3.3E-09 1.1E-13 103.4 8.0 126 443-574 12-213 (263)
411 1nd4_A Aminoglycoside 3'-phosp 98.6 2.6E-08 8.8E-13 96.7 5.5 100 466-574 58-214 (264)
412 3rw6_A Nuclear RNA export fact 98.6 1.4E-08 4.8E-13 98.2 2.2 42 232-273 168-211 (267)
413 3dxp_A Putative acyl-COA dehyd 98.6 1.2E-07 4.2E-12 96.8 9.1 106 466-574 81-248 (359)
414 1io0_A Tropomodulin; LRR prote 98.6 1.5E-08 5.2E-13 93.1 1.9 122 27-149 29-164 (185)
415 3rw6_A Nuclear RNA export fact 98.6 2.3E-08 7.9E-13 96.7 3.2 96 239-336 148-257 (267)
416 1io0_A Tropomodulin; LRR prote 98.6 3.6E-08 1.2E-12 90.5 4.3 45 179-223 29-78 (185)
417 3r70_A Aminoglycoside phosphot 98.1 9.5E-06 3.2E-10 81.3 9.7 122 446-574 38-237 (320)
418 3sg8_A APH(2'')-ID; antibiotic 98.0 1.6E-05 5.5E-10 78.9 9.5 122 450-574 25-223 (304)
419 3e4g_A ATP synthase subunit S, 97.8 9.8E-06 3.3E-10 72.6 4.0 82 187-268 62-149 (176)
420 3e4g_A ATP synthase subunit S, 97.8 6.4E-06 2.2E-10 73.8 2.2 83 34-118 61-150 (176)
421 3tdw_A Gentamicin resistance p 97.7 0.00011 3.9E-09 72.8 10.4 106 466-574 54-224 (306)
422 4gkh_A Aminoglycoside 3'-phosp 97.4 0.00046 1.6E-08 66.9 9.8 104 466-574 64-223 (272)
423 1pgv_A TMD-1, tropomodulin TMD 97.3 0.00014 4.6E-09 66.5 3.8 116 31-148 38-169 (197)
424 3ovc_A Hygromycin-B 4-O-kinase 97.3 0.00038 1.3E-08 70.8 7.1 125 450-574 46-243 (362)
425 1pgv_A TMD-1, tropomodulin TMD 97.1 0.00044 1.5E-08 63.0 5.4 67 181-247 36-111 (197)
426 3rfe_A Platelet glycoprotein I 97.0 0.00097 3.3E-08 56.7 6.2 37 307-344 33-69 (130)
427 3ats_A Putative uncharacterize 97.0 0.00091 3.1E-08 67.7 7.1 44 466-509 72-121 (357)
428 3rfe_A Platelet glycoprotein I 97.0 0.0012 3.9E-08 56.2 6.2 35 85-119 33-67 (130)
429 3d1u_A Putative fructosamine-3 96.8 0.0034 1.2E-07 61.4 8.9 57 448-508 18-97 (288)
430 2q83_A YTAA protein; 2635576, 96.4 0.0046 1.6E-07 61.8 6.7 32 543-574 221-252 (346)
431 3jr1_A Putative fructosamine-3 95.9 0.015 5.1E-07 57.4 7.9 104 466-570 73-232 (312)
432 2olc_A MTR kinase, methylthior 95.9 0.019 6.3E-07 58.9 9.0 31 543-574 226-256 (397)
433 3csv_A Aminoglycoside phosphot 94.4 0.088 3E-06 52.3 8.3 32 543-574 182-217 (333)
434 3dxq_A Choline/ethanolamine ki 94.1 0.097 3.3E-06 51.2 7.6 31 543-574 172-202 (301)
435 1nw1_A Choline kinase (49.2 KD 91.0 0.15 5.1E-06 52.7 4.2 38 466-507 120-158 (429)
436 2qg7_A Ethanolamine kinase PV0 90.5 0.41 1.4E-05 49.8 7.0 35 469-507 152-187 (458)
437 3feg_A Choline/ethanolamine ki 90.2 0.53 1.8E-05 47.5 7.3 106 465-574 97-254 (379)
438 3f7w_A Putative fructosamine-3 89.9 0.45 1.5E-05 45.9 6.4 58 446-507 16-96 (288)
439 3f2s_A CK, chetk-alpha, cholin 88.0 0.7 2.4E-05 47.0 6.4 33 542-574 242-280 (401)
440 2pyw_A Uncharacterized protein 85.9 0.75 2.6E-05 47.2 5.3 31 543-574 231-261 (420)
441 2ks1_B Epidermal growth factor 84.0 0.66 2.3E-05 30.4 2.4 12 407-418 31-42 (44)
442 2jwa_A Receptor tyrosine-prote 81.3 0.6 2E-05 30.5 1.4 10 390-399 13-22 (44)
443 2l2t_A Receptor tyrosine-prote 80.7 0.88 3E-05 29.7 2.0 13 407-419 30-42 (44)
444 3g15_A CK, chetk-alpha, cholin 76.7 0.83 2.8E-05 46.5 1.6 30 545-574 245-280 (401)
445 2ppq_A HSK, HK, homoserine kin 76.4 0.79 2.7E-05 44.9 1.4 32 543-574 186-217 (322)
446 1zyl_A Hypothetical protein YI 71.8 3.9 0.00013 39.9 5.1 30 543-574 194-223 (328)
447 4ann_A ESSB; membrane protein, 68.7 8.7 0.0003 35.0 6.2 87 479-575 43-129 (215)
448 3c5i_A Choline kinase; choline 66.8 4.6 0.00016 40.2 4.5 30 543-573 211-240 (369)
449 4ano_A ESSB; membrane protein, 64.1 21 0.00072 32.5 7.8 86 479-575 48-134 (219)
450 3i1a_A Spectinomycin phosphotr 61.8 2.7 9.4E-05 41.5 1.6 32 543-574 205-236 (339)
451 2lz0_A Uncharacterized protein 56.1 11 0.00039 29.5 4.1 45 71-116 8-52 (100)
452 2lz0_A Uncharacterized protein 55.2 27 0.00093 27.3 6.2 47 173-220 7-53 (100)
453 3mes_A Choline kinase; malaria 37.4 13 0.00046 37.8 2.1 31 543-574 261-291 (424)
454 2k1k_A Ephrin type-A receptor 36.3 13 0.00043 23.4 1.0 14 390-403 12-25 (38)
455 2yle_A Protein spire homolog 1 28.0 89 0.003 28.5 5.6 61 506-568 33-93 (229)
456 3cxl_A N-chimerin; SH2, RHO-GA 24.8 19 0.00064 37.2 0.6 25 467-491 190-214 (463)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.9e-49 Score=450.30 Aligned_cols=369 Identities=34% Similarity=0.529 Sum_probs=303.2
Q ss_pred CCcccCCC-CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcc--
Q 036342 2 IPLEIGNL-QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRF-- 78 (596)
Q Consensus 2 ip~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-- 78 (596)
+|..+..+ ++|++|+|++|++++..|..|..+++|++|+|++|+++|.++...+..+++|++|+|++|++++.+|..
T Consensus 285 ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~ 364 (768)
T 3rgz_A 285 IPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLT 364 (768)
T ss_dssp CCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHH
T ss_pred cCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHH
Confidence 45555554 666666666666666666666666666666666666655555433333555555555555555444444
Q ss_pred -----------------------ccC--CCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCC
Q 036342 79 -----------------------IFN--ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLS 133 (596)
Q Consensus 79 -----------------------~~~--l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~ 133 (596)
+.. +++|++|+|++|.+++.+|..|.++++|++|++++|.+++..+. .+.
T Consensus 365 ~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-----~l~ 439 (768)
T 3rgz_A 365 NLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPS-----SLG 439 (768)
T ss_dssp HHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCG-----GGG
T ss_pred hhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccH-----HHh
Confidence 433 55677777777777778888888888888888888888865443 688
Q ss_pred CCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCC
Q 036342 134 NCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQ 213 (596)
Q Consensus 134 ~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 213 (596)
++++|+.|++++|.+++.+|. .+..+ ++|++|++++|++++..|..|.++++|++|++++|++++.+|.+++.+++|+
T Consensus 440 ~l~~L~~L~L~~n~l~~~~p~-~~~~l-~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 517 (768)
T 3rgz_A 440 SLSKLRDLKLWLNMLEGEIPQ-ELMYV-KTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517 (768)
T ss_dssp GCTTCCEEECCSSCCCSCCCG-GGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred cCCCCCEEECCCCcccCcCCH-HHcCC-CCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCC
Confidence 899999999999999988887 67777 7899999999999999999999999999999999999999999999999999
Q ss_pred eEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhh---------------------------------------
Q 036342 214 RLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACF--------------------------------------- 254 (596)
Q Consensus 214 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~--------------------------------------- 254 (596)
+|++++|.+++.+|..+..+++|+.|++++|++++.+|..+
T Consensus 518 ~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (768)
T 3rgz_A 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQ 597 (768)
T ss_dssp EEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECT
T ss_pred EEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999999999987777644
Q ss_pred -------------------------------ccCCCCcEEEeCCCcccC-CCcccccccccceEEcccCCCCCchhhhhc
Q 036342 255 -------------------------------GNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPLLLEIG 302 (596)
Q Consensus 255 -------------------------------~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 302 (596)
+.+++|+.|||++|++++ +|.++..+++|+.|+|++|+++|.+|..++
T Consensus 598 ~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~ 677 (768)
T 3rgz_A 598 GIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVG 677 (768)
T ss_dssp TCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGG
T ss_pred cccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHh
Confidence 335789999999999996 899999999999999999999999999999
Q ss_pred cccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCCCCCCCCCccc
Q 036342 303 NLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPNLQVPPCKTSI 381 (596)
Q Consensus 303 ~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~~~~~~~~~~~ 381 (596)
.++.|+.|||++|+++|.+|. .+..+++|++||+++|+++|.+|..+.+..+....+.||+.+||.|. ++|....
T Consensus 678 ~L~~L~~LdLs~N~l~g~ip~-~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l---~~C~~~~ 752 (768)
T 3rgz_A 678 DLRGLNILDLSSNKLDGRIPQ-AMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL---PRCDPSN 752 (768)
T ss_dssp GCTTCCEEECCSSCCEECCCG-GGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS---CCCCSCC
T ss_pred CCCCCCEEECCCCcccCcCCh-HHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC---cCCCCCc
Confidence 999999999999999999998 56789999999999999999999999999999999999999999874 3676543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.5e-47 Score=434.68 Aligned_cols=360 Identities=33% Similarity=0.480 Sum_probs=305.8
Q ss_pred CCCCCCEEECCCCCCccccchhhhCC-CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcc-ccCCCCC
Q 036342 8 NLQNLEELQLGQNKLIGTVPAAIFNV-STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRF-IFNASKL 85 (596)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L 85 (596)
.+++|++|+|++|++++.+|..+... ++|++|+|++|++++.++.. +..+++|++|+|++|++++.+|.. +.++++|
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~-~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L 345 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPF-FGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGG-GGGCTTCCEEECCSSEEEEECCHHHHTTCTTC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchH-HhcCCCccEEECCCCcccCcCCHHHHhcCCCC
Confidence 78999999999999999999988775 99999999999999766652 345999999999999999888876 9999999
Q ss_pred CEEEccCCcccccCCccccCCC-CCCEEecCCCcCcCCCCCc---------------------cccccCCCCCCCCEEEC
Q 036342 86 SKLSLGMNSFSGFIPSTFGNLR-NLEQLGLDENYLTSSTPEL---------------------SFLSSLSNCKSLTLIDL 143 (596)
Q Consensus 86 ~~L~L~~N~i~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~---------------------~~~~~~~~l~~L~~L~l 143 (596)
++|+|++|++++.+|..+.+++ +|++|++++|.+++..+.. .++..+.++++|+.|++
T Consensus 346 ~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 425 (768)
T 3rgz_A 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHL 425 (768)
T ss_dssp CEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEEC
T ss_pred CEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEEC
Confidence 9999999999999999888877 7888888888776421110 13345777888888888
Q ss_pred cCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCccc
Q 036342 144 SNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 144 s~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
++|++++.+|. .+..+ ++|++|++++|.+++..|..|..+++|++|++++|.+++.+|..+..+++|++|++++|+++
T Consensus 426 s~N~l~~~~p~-~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~ 503 (768)
T 3rgz_A 426 SFNYLSGTIPS-SLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLT 503 (768)
T ss_dssp CSSEEESCCCG-GGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCC
T ss_pred cCCcccCcccH-HHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccC
Confidence 88888887776 67777 67888888888888888888888889999999999998888888888999999999999998
Q ss_pred ccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC-CCccc-------------------------
Q 036342 224 GSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTF------------------------- 277 (596)
Q Consensus 224 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-ip~~~------------------------- 277 (596)
+.+|..+..+++|++|+|++|++++.+|..++.+++|+.|+|++|.+++ +|..+
T Consensus 504 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (768)
T 3rgz_A 504 GEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGM 583 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSC
T ss_pred CcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccc
Confidence 8888888889999999999999988889899999999999999998874 66433
Q ss_pred ---------------------------------------------ccccccceEEcccCCCCCchhhhhccccccceEec
Q 036342 278 ---------------------------------------------WNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDF 312 (596)
Q Consensus 278 ---------------------------------------------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l 312 (596)
..+++|++|+|++|+++|.+|..++.++.|+.|||
T Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~L 663 (768)
T 3rgz_A 584 KKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNL 663 (768)
T ss_dssp CTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEEC
T ss_pred cccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeC
Confidence 23467888999999999999999999999999999
Q ss_pred CCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-CCCCCCCcccccccccccCCCC
Q 036342 313 SMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-GSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 313 s~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
++|+++|.+|. .+..++.|+.|||++|+++|.+|.. ..++.++.+++++|++....|.
T Consensus 664 s~N~l~g~ip~-~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 664 GHNDISGSIPD-EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp CSSCCCSCCCG-GGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred cCCccCCCCCh-HHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99999999998 5568899999999999999998876 5688899999999998655443
No 3
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.9e-43 Score=391.26 Aligned_cols=364 Identities=20% Similarity=0.175 Sum_probs=265.0
Q ss_pred cccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCC
Q 036342 4 LEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNAS 83 (596)
Q Consensus 4 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 83 (596)
..|.++++|++|+|++|+++++.|.+|.++++|++|+|++|++++..| ..+..+++|++|+|++|.+++..+..+.+++
T Consensus 50 ~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 128 (606)
T 3vq2_A 50 YSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSP-GSFSGLTSLENLVAVETKLASLESFPIGQLI 128 (606)
T ss_dssp TTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCT-TSSTTCTTCCEEECTTSCCCCSSSSCCTTCT
T ss_pred hhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccCh-hhcCCcccCCEEEccCCccccccccccCCCC
Confidence 356677777777777777776666677777777777777777764323 3334467777777777777666656677777
Q ss_pred CCCEEEccCCcccc-cCCccccCCCCCCEEecCCCcCcCCCCCc-c---------------------ccc----------
Q 036342 84 KLSKLSLGMNSFSG-FIPSTFGNLRNLEQLGLDENYLTSSTPEL-S---------------------FLS---------- 130 (596)
Q Consensus 84 ~L~~L~L~~N~i~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~---------------------~~~---------- 130 (596)
+|++|+|++|.+++ .+|..|.++++|++|++++|.+++..+.. . ++.
T Consensus 129 ~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~ 208 (606)
T 3vq2_A 129 TLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHE 208 (606)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEE
T ss_pred CCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeee
Confidence 77777777777765 34667777777777777777776643320 0 000
Q ss_pred --------------------------------------------------------------------------------
Q 036342 131 -------------------------------------------------------------------------------- 130 (596)
Q Consensus 131 -------------------------------------------------------------------------------- 130 (596)
T Consensus 209 L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~ 288 (606)
T 3vq2_A 209 LTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVS 288 (606)
T ss_dssp EEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCS
T ss_pred eeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCC
Confidence
Q ss_pred -------------cCCCCCCCCEEECcCCCCCccCCc-------------------hhhhcccccccEEEccccccccc-
Q 036342 131 -------------SLSNCKSLTLIDLSNNPLDGILPK-------------------TSISNLSRSLEEFYMYNCNISGG- 177 (596)
Q Consensus 131 -------------~~~~l~~L~~L~ls~N~l~~~~~~-------------------~~~~~l~~~L~~L~l~~n~l~~~- 177 (596)
.+..+++|+.|++++|.+ +.+|. ..+..+ ++|++|++++|.+++.
T Consensus 289 ~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l-~~L~~L~ls~n~l~~~~ 366 (606)
T 3vq2_A 289 AMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVAL-PSLSYLDLSRNALSFSG 366 (606)
T ss_dssp EEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCC-TTCCEEECCSSCEEEEE
T ss_pred EEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccC-CCCCEEECcCCccCCCc
Confidence 011222333333333333 11110 011122 4566777777777665
Q ss_pred -cChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCc-cchhcCCCCcEEEccCCcCcccchhhhc
Q 036342 178 -IPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP-DDICRLAELYRLELGSNKLYGSIPACFG 255 (596)
Q Consensus 178 -~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 255 (596)
.|..+..+++|++|++++|.+.+ .|..|..+++|++|++++|.+.+..| ..+..+++|++|++++|++.+..|..+.
T Consensus 367 ~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 445 (606)
T 3vq2_A 367 CCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFL 445 (606)
T ss_dssp ECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred chhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhc
Confidence 36777788888888888888775 45778889999999999999987777 6788899999999999999988899999
Q ss_pred cCCCCcEEEeCCCcccC--CCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCC
Q 036342 256 NLASLRILSLGSNKLTS--IPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLE 333 (596)
Q Consensus 256 ~l~~L~~L~Ls~N~l~~--ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~ 333 (596)
.+++|++|++++|.+++ +|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++.+|. .+..+++|+
T Consensus 446 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~ 524 (606)
T 3vq2_A 446 GLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSS-HYNQLYSLS 524 (606)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGG-GTTTCTTCC
T ss_pred CCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHH-HccCCCcCC
Confidence 99999999999999987 688889999999999999999999899999999999999999999977666 667899999
Q ss_pred eEECCCCcccccCCCCCCCC-CCCcccccccccccCCCCC
Q 036342 334 DLNLSFNKLKGEIPRGGSFG-NFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 334 ~L~l~~N~l~~~~p~~~~~~-~l~~l~~~~N~~~c~~~~~ 372 (596)
+|++++|+++..++....++ +++.+++++|++.|+++..
T Consensus 525 ~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 525 TLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp EEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred EEECCCCcCcccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 99999999985444434565 5899999999999987753
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.5e-44 Score=395.03 Aligned_cols=332 Identities=20% Similarity=0.286 Sum_probs=272.6
Q ss_pred CCccccchhhhCCCCCCEEEccCCcCccc-----------------cCc-cCccCCCCccEEEccCCccccccCccccCC
Q 036342 21 KLIGTVPAAIFNVSTLKFLGLQNNSLSGS-----------------LSS-IANVRLPNLEKLYLWGNNFSGTIPRFIFNA 82 (596)
Q Consensus 21 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (596)
++++ +|.+|..+++|++|+|++|++++. +|. +++..+++|++|+|++|++.+.+|..+.++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 788899999999999999999983 444 663459999999999999999999999999
Q ss_pred CCCCEEEccCCc-ccc-cCCccccCC------CCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCc
Q 036342 83 SKLSKLSLGMNS-FSG-FIPSTFGNL------RNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPK 154 (596)
Q Consensus 83 ~~L~~L~L~~N~-i~~-~~~~~~~~l------~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 154 (596)
++|++|+|++|+ +++ .+|..++.+ ++|++|++++|.++.++.. ..+.++++|+.|++++|.++|.+|
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~----~~l~~l~~L~~L~L~~N~l~g~ip- 347 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE----TSLQKMKKLGMLECLYNQLEGKLP- 347 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH----HHHTTCTTCCEEECCSCCCEEECC-
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch----hhhccCCCCCEEeCcCCcCccchh-
Confidence 999999999998 998 888888877 9999999999999865430 047899999999999999998888
Q ss_pred hhhhcccccccEEEccccccccccChhccCCCC-CCEEEccCCcccCCCCccccCCC--CCCeEEccCCcccccCccchh
Q 036342 155 TSISNLSRSLEEFYMYNCNISGGIPEEISNLTN-LVEIDLGGNKLNGSIPITLGKLR--KLQRLNLEDNILEGSIPDDIC 231 (596)
Q Consensus 155 ~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~~~~ 231 (596)
.+..+ ++|++|++++|+++ .+|..|..+++ |++|++++|.++ .+|..+..++ +|++|++++|.+++.+|..+.
T Consensus 348 -~~~~l-~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 348 -AFGSE-IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp -CCEEE-EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred -hhCCC-CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 57777 68999999999998 77888999998 999999999998 6777777654 889999999999888888777
Q ss_pred -------cCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccc--------cccceEEcccCCCCCc
Q 036342 232 -------RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNL--------KDILQLNFSSNFLTGP 296 (596)
Q Consensus 232 -------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l--------~~L~~L~ls~N~l~~~ 296 (596)
.+++|++|+|++|+++...+..+..+++|+.|+|++|.++.+|...... ++|+.|++++|+++ .
T Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 502 (636)
T 4eco_A 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-K 502 (636)
T ss_dssp TTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-B
T ss_pred ccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-c
Confidence 7778888899888888655556667888888888888888888765432 28888888888888 4
Q ss_pred hhhhhc--cccccceEecCCCcCcccCChhhhccCCCCCeEEC------CCCcccccCCCC-CCCCCCCccccccccc
Q 036342 297 LLLEIG--NLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNL------SFNKLKGEIPRG-GSFGNFSAESFEGNEL 365 (596)
Q Consensus 297 ~~~~~~--~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l------~~N~l~~~~p~~-~~~~~l~~l~~~~N~~ 365 (596)
+|..+. .+++|+.|++++|++++ +|.. +..+++|+.|++ ++|++.+.+|.. ..+++++.+++++|.+
T Consensus 503 lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~-~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 503 LSDDFRATTLPYLVGIDLSYNSFSK-FPTQ-PLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCG-GGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred cChhhhhccCCCcCEEECCCCCCCC-cChh-hhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC
Confidence 566665 88888888888888886 6764 446888888888 456677777765 4577888888888887
No 5
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-43 Score=406.22 Aligned_cols=367 Identities=21% Similarity=0.219 Sum_probs=210.0
Q ss_pred CcccCCCCCCCEEECCCCCCcccc-chhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcc--c
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTV-PAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRF--I 79 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--~ 79 (596)
|.+|.++++|++|||++|.+.+.+ |.+|.++++|++|+|++|++++..+ ..+..+++|++|+|++|.+++..|.. |
T Consensus 41 ~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~ 119 (844)
T 3j0a_A 41 ASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHP-DAFQGLFHLFELRLYFCGLSDAVLKDGYF 119 (844)
T ss_dssp SSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECT-TSSCSCSSCCCEECTTCCCSSCCSTTCCC
T ss_pred hhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCH-hHccCCcccCEeeCcCCCCCcccccCccc
Confidence 456666666777777666433333 5666667777777777777664333 23334667777777777766544443 6
Q ss_pred cCCCCCCEEEccCCcccccCC-ccccCCCCCCEEecCCCcCcCCCCCc-c--------------------ccccCCCCC-
Q 036342 80 FNASKLSKLSLGMNSFSGFIP-STFGNLRNLEQLGLDENYLTSSTPEL-S--------------------FLSSLSNCK- 136 (596)
Q Consensus 80 ~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~-~--------------------~~~~~~~l~- 136 (596)
.++++|++|+|++|.+++..+ ..|.++++|++|++++|.+++..+.. . .+..+..+.
T Consensus 120 ~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~ 199 (844)
T 3j0a_A 120 RNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMN 199 (844)
T ss_dssp SSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSC
T ss_pred cccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCC
Confidence 667777777777777766544 45667777777777777665532210 0 001111111
Q ss_pred -----CCCEEECcCCCCCccCCchhh-----------------------------------hcc-cccccEEEccccccc
Q 036342 137 -----SLTLIDLSNNPLDGILPKTSI-----------------------------------SNL-SRSLEEFYMYNCNIS 175 (596)
Q Consensus 137 -----~L~~L~ls~N~l~~~~~~~~~-----------------------------------~~l-~~~L~~L~l~~n~l~ 175 (596)
+|+.|++++|.+++..+.... ..+ .++|+.|++++|.++
T Consensus 200 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~ 279 (844)
T 3j0a_A 200 PFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVF 279 (844)
T ss_dssp TTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCC
T ss_pred ccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCccc
Confidence 255555555544433222100 000 135666666666666
Q ss_pred cccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhc
Q 036342 176 GGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFG 255 (596)
Q Consensus 176 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 255 (596)
+..|..|..+++|+.|+|++|.+++..|..|.++++|++|++++|.+++..|..|..+++|+.|++++|++.+..+..|.
T Consensus 280 ~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~ 359 (844)
T 3j0a_A 280 SLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFK 359 (844)
T ss_dssp EECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSC
T ss_pred ccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhc
Confidence 66666666666777777777776666666666666677777777666655566666666666666666666655555666
Q ss_pred cCCCCcEEEeCCCcccCCCc-----------------------------------------ccccccccceEEcccCCCC
Q 036342 256 NLASLRILSLGSNKLTSIPL-----------------------------------------TFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 256 ~l~~L~~L~Ls~N~l~~ip~-----------------------------------------~~~~l~~L~~L~ls~N~l~ 294 (596)
.+++|+.|+|++|.++.++. .+..+++|++|++++|+++
T Consensus 360 ~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~ 439 (844)
T 3j0a_A 360 FLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFS 439 (844)
T ss_dssp SCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCC
T ss_pred CCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccc
Confidence 66666666666665554321 0112334444444444443
Q ss_pred C------------------------------chhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccc
Q 036342 295 G------------------------------PLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344 (596)
Q Consensus 295 ~------------------------------~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 344 (596)
+ ..+..|.++++|+.|||++|++++..|. .+..+++|++|+|++|++++
T Consensus 440 ~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~ 518 (844)
T 3j0a_A 440 SCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG-VFSHLTALRGLSLNSNRLTV 518 (844)
T ss_dssp CCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT-SSSSCCSCSEEEEESCCCSS
T ss_pred ccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh-HccchhhhheeECCCCCCCc
Confidence 2 1122344555566666666666543332 44455555555555555554
Q ss_pred cCCCC--------------------CCCCCCCcccccccccccCCCC
Q 036342 345 EIPRG--------------------GSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 345 ~~p~~--------------------~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
.+|.. ..+.+++.+++++||+.|+++.
T Consensus 519 l~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 519 LSHNDLPANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECEL 565 (844)
T ss_dssp CCCCCCCSCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSSC
T ss_pred cChhhhhccccEEECCCCcCCCCChhHhCCcCEEEecCCCccccccc
Confidence 33321 1256788899999999998764
No 6
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-43 Score=375.07 Aligned_cols=356 Identities=22% Similarity=0.263 Sum_probs=303.2
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEE
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLS 89 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (596)
++|++|+|++|+|+++.|..|..+++|++|+|++|.+.+.+++..+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999988999999999999999999998778776677799999999999999988899999999999999
Q ss_pred ccCCcccccCCcc--ccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc-cccccE
Q 036342 90 LGMNSFSGFIPST--FGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL-SRSLEE 166 (596)
Q Consensus 90 L~~N~i~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l-~~~L~~ 166 (596)
|++|++++..+.. |.++++|++|++++|.+++..+. ..+.++++|++|++++|.+++..+. .+..+ ..+++.
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~~~L~~ 184 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA----SFFLNMRRFHVLDLTFNKVKSICEE-DLLNFQGKHFTL 184 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC----GGGGGCTTCCEEECTTCCBSCCCTT-TSGGGTTCEEEE
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcc----cccCCCCcccEEeCCCCcccccChh-hhhccccccccc
Confidence 9999999855544 99999999999999999987543 1278899999999999999988665 45444 257999
Q ss_pred EEccccccccccChhc--------cCCCCCCEEEccCCcccCCCCccccCC---CCCCeEEccCCccccc----------
Q 036342 167 FYMYNCNISGGIPEEI--------SNLTNLVEIDLGGNKLNGSIPITLGKL---RKLQRLNLEDNILEGS---------- 225 (596)
Q Consensus 167 L~l~~n~l~~~~~~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~---------- 225 (596)
|++++|.+.+..+..+ ..+++|++|++++|.+.+..|..+... ++|+.|++++|.+.+.
T Consensus 185 L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 264 (455)
T 3v47_A 185 LRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDP 264 (455)
T ss_dssp EECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCC
T ss_pred cccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccC
Confidence 9999999987665443 356889999999999998888777654 8899999998865432
Q ss_pred Cccchhc--CCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCchhhhhc
Q 036342 226 IPDDICR--LAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIG 302 (596)
Q Consensus 226 ~~~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 302 (596)
.+..+.. .++|+.|++++|++.+..|..|..+++|+.|+|++|.++++ |..+..+++|++|++++|.+++..+..+.
T Consensus 265 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 344 (455)
T 3v47_A 265 DNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFE 344 (455)
T ss_dssp CTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGT
T ss_pred cccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhc
Confidence 1122222 36899999999999988899999999999999999999986 55788899999999999999988889999
Q ss_pred cccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-CCCCCCCcccccccccccCCCC
Q 036342 303 NLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-GSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 303 ~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
.+++|++||+++|++++..|. .+..+++|++|++++|++++.++.. ..+++++.+++++|++.|++|.
T Consensus 345 ~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 345 NLDKLEVLDLSYNHIRALGDQ-SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TCTTCCEEECCSSCCCEECTT-TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CcccCCEEECCCCcccccChh-hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 999999999999999876665 5678999999999999999766654 5688999999999999998774
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.2e-44 Score=394.73 Aligned_cols=352 Identities=17% Similarity=0.199 Sum_probs=309.6
Q ss_pred CCcccCCCCCCCEEECCCCCCccc-----------------cchhhh--CCCCCCEEEccCCcCccccCccCccCCCCcc
Q 036342 2 IPLEIGNLQNLEELQLGQNKLIGT-----------------VPAAIF--NVSTLKFLGLQNNSLSGSLSSIANVRLPNLE 62 (596)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~n~l~~~-----------------~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~ 62 (596)
||++|+++++|++|+|++|++++. +|..+. .+++|++|+|++|++.+.+|. .+..+++|+
T Consensus 198 ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~-~l~~l~~L~ 276 (636)
T 4eco_A 198 VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT-FLKALPEMQ 276 (636)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCT-TTTTCSSCC
T ss_pred CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChH-HHhcCCCCC
Confidence 789999999999999999999985 899988 999999999999999988875 234599999
Q ss_pred EEEccCCc-ccc-ccCccccCC------CCCCEEEccCCcccccCCc--cccCCCCCCEEecCCCcCcCCCCCccccccC
Q 036342 63 KLYLWGNN-FSG-TIPRFIFNA------SKLSKLSLGMNSFSGFIPS--TFGNLRNLEQLGLDENYLTSSTPELSFLSSL 132 (596)
Q Consensus 63 ~L~L~~N~-l~~-~~~~~~~~l------~~L~~L~L~~N~i~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 132 (596)
+|+|++|+ +++ .+|..++.+ ++|++|+|++|+++ .+|. .|.++++|++|++++|.+++.. + .+
T Consensus 277 ~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~i-----p-~~ 349 (636)
T 4eco_A 277 LINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKL-----P-AF 349 (636)
T ss_dssp EEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEEC-----C-CC
T ss_pred EEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccch-----h-hh
Confidence 99999998 998 899988887 99999999999999 6777 8999999999999999998422 2 47
Q ss_pred CCCCCCCEEECcCCCCCccCCchhhhccccc-ccEEEccccccccccChhccCCC--CCCEEEccCCcccCCCCcccc--
Q 036342 133 SNCKSLTLIDLSNNPLDGILPKTSISNLSRS-LEEFYMYNCNISGGIPEEISNLT--NLVEIDLGGNKLNGSIPITLG-- 207 (596)
Q Consensus 133 ~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~-L~~L~l~~n~l~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-- 207 (596)
..+++|+.|++++|+++ .+|. .+..+ ++ |++|++++|.++ .+|..+..+. +|++|++++|.+.+..|..|.
T Consensus 350 ~~l~~L~~L~L~~N~l~-~lp~-~l~~l-~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 425 (636)
T 4eco_A 350 GSEIKLASLNLAYNQIT-EIPA-NFCGF-TEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPL 425 (636)
T ss_dssp EEEEEESEEECCSSEEE-ECCT-TSEEE-CTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTT
T ss_pred CCCCCCCEEECCCCccc-cccH-hhhhh-cccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhccc
Confidence 88999999999999998 5565 57777 56 999999999999 6788887765 899999999999999999888
Q ss_pred -----CCCCCCeEEccCCcccccCccc-hhcCCCCcEEEccCCcCcccchhhhccCC-------CCcEEEeCCCcccCCC
Q 036342 208 -----KLRKLQRLNLEDNILEGSIPDD-ICRLAELYRLELGSNKLYGSIPACFGNLA-------SLRILSLGSNKLTSIP 274 (596)
Q Consensus 208 -----~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~ip 274 (596)
.+++|++|++++|.++ .+|.. +..+++|+.|+|++|+++...+..+..+. +|+.|+|++|+++.+|
T Consensus 426 ~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp 504 (636)
T 4eco_A 426 DPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKLS 504 (636)
T ss_dssp CSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBCC
T ss_pred ccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCccC
Confidence 8889999999999999 45554 55699999999999999954444555443 9999999999999999
Q ss_pred cccc--cccccceEEcccCCCCCchhhhhccccccceEec------CCCcCcccCChhhhccCCCCCeEECCCCcccccC
Q 036342 275 LTFW--NLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDF------SMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEI 346 (596)
Q Consensus 275 ~~~~--~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~l------s~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 346 (596)
..+. .+++|+.|++++|++++ +|..+..+++|+.|++ ++|++.+.+|. .+..+++|++|++++|++ +.+
T Consensus 505 ~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l-~~i 581 (636)
T 4eco_A 505 DDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPE-GITLCPSLTQLQIGSNDI-RKV 581 (636)
T ss_dssp GGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCT-TGGGCSSCCEEECCSSCC-CBC
T ss_pred hhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChH-HHhcCCCCCEEECCCCcC-Ccc
Confidence 9987 99999999999999998 7889999999999999 56888989998 556899999999999999 567
Q ss_pred CCCCCCCCCCcccccccccccCCC
Q 036342 347 PRGGSFGNFSAESFEGNELLCGSP 370 (596)
Q Consensus 347 p~~~~~~~l~~l~~~~N~~~c~~~ 370 (596)
|... .++++.+++++|++.|...
T Consensus 582 p~~~-~~~L~~L~Ls~N~l~~~~~ 604 (636)
T 4eco_A 582 NEKI-TPNISVLDIKDNPNISIDL 604 (636)
T ss_dssp CSCC-CTTCCEEECCSCTTCEEEC
T ss_pred CHhH-hCcCCEEECcCCCCccccH
Confidence 7653 3899999999999988554
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.8e-42 Score=379.39 Aligned_cols=354 Identities=21% Similarity=0.213 Sum_probs=225.8
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||.++.. ++++|+|++|+|+++.|.+|..+++|++|+|++|++++ +.+..+..+++|++|+|++|++++..|.+|.
T Consensus 26 ~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 102 (606)
T 3t6q_A 26 EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYW-IHEDTFQSQHRLDTLVLTANPLIFMAETALS 102 (606)
T ss_dssp SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCSEECTTTTS
T ss_pred cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccce-eChhhccCccccCeeeCCCCcccccChhhhc
Confidence 36666643 68888888888888778888888888888888888874 4444445588888888888888877788888
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|+|+++.+..|.++++|++|++++|.++++... .+..+++|++|++++|.+++..+. .+..+
T Consensus 103 ~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l 176 (606)
T 3t6q_A 103 GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLP-----KGFPTEKLKVLDFQNNAIHYLSKE-DMSSL 176 (606)
T ss_dssp SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCC-----TTCCCTTCCEEECCSSCCCEECHH-HHHTT
T ss_pred ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcc-----cccCCcccCEEEcccCcccccChh-hhhhh
Confidence 888888888888888877777788888888888888888775322 244577777777777777765443 45555
Q ss_pred ccccc--EEEccccccccccChhccCC---------------------------------------------------CC
Q 036342 161 SRSLE--EFYMYNCNISGGIPEEISNL---------------------------------------------------TN 187 (596)
Q Consensus 161 ~~~L~--~L~l~~n~l~~~~~~~~~~l---------------------------------------------------~~ 187 (596)
++|+ .|++++|.+++..|..|... .+
T Consensus 177 -~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~ 255 (606)
T 3t6q_A 177 -QQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMS 255 (606)
T ss_dssp -TTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSE
T ss_pred -cccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCc
Confidence 4555 66666666666555444321 04
Q ss_pred CCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCC
Q 036342 188 LVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGS 267 (596)
Q Consensus 188 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 267 (596)
|+.|++++|.+++..+..|..+++|++|++++|.++ .+|..+..+++|++|++++|++.+..|..+..+++|++|++++
T Consensus 256 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 334 (606)
T 3t6q_A 256 VESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKG 334 (606)
T ss_dssp EEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCS
T ss_pred eeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCC
Confidence 455555555665555555666666666666666665 4555555566666666666666555555555666666666666
Q ss_pred Cccc-CCCcc-cccccccceEEcccCCCCCch--hhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCccc
Q 036342 268 NKLT-SIPLT-FWNLKDILQLNFSSNFLTGPL--LLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLK 343 (596)
Q Consensus 268 N~l~-~ip~~-~~~l~~L~~L~ls~N~l~~~~--~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~ 343 (596)
|.+. .+|.. +..+++|++|++++|.+++.. +..+..+++|+.|++++|.+++..|. .+..+++|+.|++++|++.
T Consensus 335 n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 335 NTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE-AFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp CSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT-TTTTCTTCSEEECTTCCEE
T ss_pred CCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH-HhcCCccCCeEECCCCcCC
Confidence 6555 24432 455556666666666555544 44555555566666666655544333 3445555666666666555
Q ss_pred ccCCCC--CCCCCCCcccccccccc
Q 036342 344 GEIPRG--GSFGNFSAESFEGNELL 366 (596)
Q Consensus 344 ~~~p~~--~~~~~l~~l~~~~N~~~ 366 (596)
+..|.. ..+++++.+++++|.+.
T Consensus 414 ~~~~~~~~~~l~~L~~L~l~~n~l~ 438 (606)
T 3t6q_A 414 VKDAQSPFQNLHLLKVLNLSHSLLD 438 (606)
T ss_dssp CCTTCCTTTTCTTCCEEECTTCCCB
T ss_pred CcccchhhhCcccCCEEECCCCccC
Confidence 444332 33555555555555543
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.4e-42 Score=382.54 Aligned_cols=302 Identities=23% Similarity=0.195 Sum_probs=240.8
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT 139 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~ 139 (596)
+|+.|++++|.+++..+..|.++++|++|++++|+++ .+|..+.++++|++|++++|.++...+. .+.++++|+
T Consensus 255 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~ 328 (606)
T 3t6q_A 255 SVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQI-----SASNFPSLT 328 (606)
T ss_dssp EEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGG-----CGGGCTTCS
T ss_pred ceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchh-----hhhccCcCC
Confidence 4555666666666555555677777777777777777 4556677777777777777777765332 467778888
Q ss_pred EEECcCCCCCccCCchhhhcccccccEEEcccccccccc--ChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 140 LIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGI--PEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 140 ~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
.|++++|.+.+.++...+..+ ++|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..|..+++|++|++
T Consensus 329 ~L~l~~n~~~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 329 HLSIKGNTKRLELGTGCLENL-ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp EEECCSCSSCCBCCSSTTTTC-TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred EEECCCCCcccccchhhhhcc-CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 888888887766666567776 67888888888888776 778888889999999999888888888888899999999
Q ss_pred cCCcccccCccc-hhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC--CC--cccccccccceEEcccCC
Q 036342 218 EDNILEGSIPDD-ICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS--IP--LTFWNLKDILQLNFSSNF 292 (596)
Q Consensus 218 ~~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--ip--~~~~~l~~L~~L~ls~N~ 292 (596)
++|.+++..+.. +..+++|+.|++++|.+.+..|..+..+++|+.|+|++|.+++ +| ..+..+++|++|++++|+
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~ 487 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCD 487 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCc
Confidence 999988766554 7888899999999999988888888889999999999999876 23 457788999999999999
Q ss_pred CCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-CCCCCCCcccccccccccCCC
Q 036342 293 LTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-GSFGNFSAESFEGNELLCGSP 370 (596)
Q Consensus 293 l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~~l~~l~~~~N~~~c~~~ 370 (596)
+++..|..+..++.|+.||+++|++++..|. .+..++.| .|++++|++++.+|.. ..+++++.+++++|+|.|+++
T Consensus 488 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 488 LSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE-ALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCGGGGG-GGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred cCccChhhhccccCCCEEECCCCccCcCChh-HhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 9988888899999999999999999877665 66788888 9999999998777664 457788899999999988665
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.2e-42 Score=390.74 Aligned_cols=327 Identities=19% Similarity=0.262 Sum_probs=244.0
Q ss_pred cchhhhCCCCCCEEEccCCcCcc-----------------ccCc-cCccCCCCccEEEccCCccccccCccccCCCCCCE
Q 036342 26 VPAAIFNVSTLKFLGLQNNSLSG-----------------SLSS-IANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSK 87 (596)
Q Consensus 26 ~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (596)
+|..|..+++|++|+|++|++++ .+|. ++|..+++|++|+|++|++.+.+|..|.++++|++
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 67788888889999999988887 1444 55456888899999888888888888888888999
Q ss_pred EEccCCc-ccc-cCCccccCCC-------CCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhh
Q 036342 88 LSLGMNS-FSG-FIPSTFGNLR-------NLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSIS 158 (596)
Q Consensus 88 L~L~~N~-i~~-~~~~~~~~l~-------~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 158 (596)
|+|++|+ +++ .+|..|..++ +|++|+|++|.++.++. ...+.++++|+.|+|++|.++ .+| .+.
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~----~~~l~~L~~L~~L~Ls~N~l~-~lp--~~~ 592 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA----SASLQKMVKLGLLDCVHNKVR-HLE--AFG 592 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC----HHHHTTCTTCCEEECTTSCCC-BCC--CCC
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC----hhhhhcCCCCCEEECCCCCcc-cch--hhc
Confidence 9998887 887 6777666554 88888888888885443 004778888888888888887 555 566
Q ss_pred cccccccEEEccccccccccChhccCCCC-CCEEEccCCcccCCCCccccCCCC--CCeEEccCCcccccCccch---h-
Q 036342 159 NLSRSLEEFYMYNCNISGGIPEEISNLTN-LVEIDLGGNKLNGSIPITLGKLRK--LQRLNLEDNILEGSIPDDI---C- 231 (596)
Q Consensus 159 ~l~~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~L~~N~l~~~~~~~~---~- 231 (596)
.+ ++|+.|+|++|.++ .+|..+..+++ |+.|++++|.++ .+|..+..++. |+.|++++|.+++.+|... .
T Consensus 593 ~L-~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~ 669 (876)
T 4ecn_A 593 TN-VKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDD 669 (876)
T ss_dssp TT-SEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTT
T ss_pred CC-CcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhcc
Confidence 66 67888888888888 67777888888 888888888888 66777766544 8888888888876655322 1
Q ss_pred -cCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccc--------cccceEEcccCCCCCchhhhhc
Q 036342 232 -RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNL--------KDILQLNFSSNFLTGPLLLEIG 302 (596)
Q Consensus 232 -~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l--------~~L~~L~ls~N~l~~~~~~~~~ 302 (596)
.+++|+.|+|++|+++...+..+..+++|+.|+|++|+++.+|..++.. ++|+.|+|++|+++ .+|..+.
T Consensus 670 ~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~ 748 (876)
T 4ecn_A 670 YKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFR 748 (876)
T ss_dssp CCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGS
T ss_pred ccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHhh
Confidence 3347888888888887544445557788888888888888777755432 27888888888887 4556665
Q ss_pred --cccccceEecCCCcCcccCChhhhccCCCCCeEECCC------CcccccCCCC-CCCCCCCccccccccc
Q 036342 303 --NLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSF------NKLKGEIPRG-GSFGNFSAESFEGNEL 365 (596)
Q Consensus 303 --~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~------N~l~~~~p~~-~~~~~l~~l~~~~N~~ 365 (596)
.+++|+.|+|++|++++ +|.. +..+++|+.|+|++ |.+.+.+|.. ..+++++.+++++|++
T Consensus 749 ~~~l~~L~~L~Ls~N~L~~-lp~~-l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 749 ATTLPYLSNMDVSYNCFSS-FPTQ-PLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI 818 (876)
T ss_dssp TTTCTTCCEEECCSSCCSS-CCCG-GGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC
T ss_pred hccCCCcCEEEeCCCCCCc-cchh-hhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC
Confidence 77788888888888876 5663 34677888887765 6666666655 4577777888888876
No 11
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-42 Score=373.06 Aligned_cols=349 Identities=23% Similarity=0.292 Sum_probs=278.8
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||.++. ++|++|+|++|+|++..|.+|..+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ .+|..
T Consensus 14 ~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~-~lp~~-- 87 (520)
T 2z7x_B 14 HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDI-SVFKFNQELEYLDLSHNKLV-KISCH-- 87 (520)
T ss_dssp SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEG-GGGTTCTTCCEEECCSSCCC-EEECC--
T ss_pred ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcCh-HHhhcccCCCEEecCCCcee-ecCcc--
Confidence 4777776 889999999999988888889999999999999999985433 33445889999999999998 45555
Q ss_pred CCCCCCEEEccCCccccc-CCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCC--CEEECcCCCC--CccCCch
Q 036342 81 NASKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSL--TLIDLSNNPL--DGILPKT 155 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L--~~L~ls~N~l--~~~~~~~ 155 (596)
.+++|++|+|++|+|++. .|..|+++++|++|++++|.++.. .+..+++| +.|++++|.+ .+..|.
T Consensus 88 ~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~--------~~~~l~~L~L~~L~l~~n~l~~~~~~~~- 158 (520)
T 2z7x_B 88 PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKS--------SVLPIAHLNISKVLLVLGETYGEKEDPE- 158 (520)
T ss_dssp CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGG--------GGGGGTTSCEEEEEEEECTTTTSSCCTT-
T ss_pred ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchh--------hccccccceeeEEEeecccccccccccc-
Confidence 788999999999999874 678899999999999999988751 24555566 7777777777 433332
Q ss_pred hhhcc---------------------------------------------------------------------------
Q 036342 156 SISNL--------------------------------------------------------------------------- 160 (596)
Q Consensus 156 ~~~~l--------------------------------------------------------------------------- 160 (596)
.+..+
T Consensus 159 ~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~ 238 (520)
T 2z7x_B 159 GLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFI 238 (520)
T ss_dssp TTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHH
T ss_pred cccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHH
Confidence 22211
Q ss_pred -------cccccEEEccccccccccChhc-----cCCCCCCEEEccCCcccCCCC-c-----------------------
Q 036342 161 -------SRSLEEFYMYNCNISGGIPEEI-----SNLTNLVEIDLGGNKLNGSIP-I----------------------- 204 (596)
Q Consensus 161 -------~~~L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~Ls~N~l~~~~p-~----------------------- 204 (596)
.++|++|++++|++++.+|..+ ..+++|+.+++++|.+ .+| .
T Consensus 239 ~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~ 316 (520)
T 2z7x_B 239 RILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVH 316 (520)
T ss_dssp HHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCC
T ss_pred HHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccc
Confidence 0268888888888887778777 6666666666655555 122 1
Q ss_pred -c-ccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcc--cchhhhccCCCCcEEEeCCCcccC-CCcc-cc
Q 036342 205 -T-LGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG--SIPACFGNLASLRILSLGSNKLTS-IPLT-FW 278 (596)
Q Consensus 205 -~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~-ip~~-~~ 278 (596)
. +..+++|++|++++|.+++.+|..+..+++|++|++++|++++ .+|..+..+++|++|+|++|.+++ +|.. +.
T Consensus 317 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~ 396 (520)
T 2z7x_B 317 MLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCS 396 (520)
T ss_dssp CCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCC
T ss_pred ccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhc
Confidence 1 2678999999999999998899999999999999999999986 556889999999999999999998 8876 77
Q ss_pred cccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC-CCCCCCCCc
Q 036342 279 NLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR-GGSFGNFSA 357 (596)
Q Consensus 279 ~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~l~~ 357 (596)
.+++|++|++++|++++..+..+. +.|+.||+++|+++ .+|..++ .+++|++|++++|+++..++. ...+++++.
T Consensus 397 ~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~ 472 (520)
T 2z7x_B 397 WTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV-KLEALQELNVASNQLKSVPDGIFDRLTSLQK 472 (520)
T ss_dssp CCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh-cCCCCCEEECCCCcCCccCHHHhccCCcccE
Confidence 899999999999999988777664 78999999999999 7888665 899999999999999964444 356888999
Q ss_pred ccccccccccCCC
Q 036342 358 ESFEGNELLCGSP 370 (596)
Q Consensus 358 l~~~~N~~~c~~~ 370 (596)
+++++|++.|+++
T Consensus 473 L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 473 IWLHTNPWDCSCP 485 (520)
T ss_dssp EECCSSCBCCCHH
T ss_pred EECcCCCCcccCC
Confidence 9999999998654
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.7e-42 Score=379.16 Aligned_cols=355 Identities=20% Similarity=0.200 Sum_probs=240.6
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||+++. ++|++|+|++|++++..|.+|..+++|++|+|++|++++. ++..+..+++|++|+|++|++++..|..|.
T Consensus 19 ~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~-~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 95 (549)
T 2z81_A 19 SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTI-EGDAFYSLGSLEHLDLSDNHLSSLSSSWFG 95 (549)
T ss_dssp SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEE-CTTTTTTCTTCCEEECTTSCCCSCCHHHHT
T ss_pred cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCcc-ChhhccccccCCEEECCCCccCccCHHHhc
Confidence 4677664 7899999999999888888899999999999999999854 444445688999999999999977777799
Q ss_pred CCCCCCEEEccCCccccc-CCccccCCCCCCEEecCCCc-CcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhh
Q 036342 81 NASKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENY-LTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSIS 158 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 158 (596)
++++|++|+|++|++++. .|..|.++++|++|++++|. +..+++. .|.++++|++|++++|.+++..|. .+.
T Consensus 96 ~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~-~l~ 169 (549)
T 2z81_A 96 PLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRI-----DFAGLTSLNELEIKALSLRNYQSQ-SLK 169 (549)
T ss_dssp TCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT-----TTTTCCEEEEEEEEETTCCEECTT-TTT
T ss_pred cCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHh-----hhhcccccCeeeccCCcccccChh-hhh
Confidence 999999999999999864 56788899999999999997 4443322 578888888888888888876554 333
Q ss_pred cc-----------------------cccccEEEcccccccccc--C-hhc------------------------------
Q 036342 159 NL-----------------------SRSLEEFYMYNCNISGGI--P-EEI------------------------------ 182 (596)
Q Consensus 159 ~l-----------------------~~~L~~L~l~~n~l~~~~--~-~~~------------------------------ 182 (596)
.+ .++|++|++++|++++.. | ...
T Consensus 170 ~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~ 249 (549)
T 2z81_A 170 SIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRY 249 (549)
T ss_dssp TCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGG
T ss_pred ccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhh
Confidence 22 146777777777776531 0 000
Q ss_pred ---------------------------------------------------------cCCCCCCEEEccCCcccCCCCcc
Q 036342 183 ---------------------------------------------------------SNLTNLVEIDLGGNKLNGSIPIT 205 (596)
Q Consensus 183 ---------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~ 205 (596)
....+|+.|++++|.+. .+|..
T Consensus 250 ~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~ 328 (549)
T 2z81_A 250 ILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCS 328 (549)
T ss_dssp CTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHH
T ss_pred hccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHH
Confidence 00123444444444444 23333
Q ss_pred c-cCCCCCCeEEccCCcccccCcc---chhcCCCCcEEEccCCcCcccch--hhhccCCCCcEEEeCCCcccCCCccccc
Q 036342 206 L-GKLRKLQRLNLEDNILEGSIPD---DICRLAELYRLELGSNKLYGSIP--ACFGNLASLRILSLGSNKLTSIPLTFWN 279 (596)
Q Consensus 206 ~-~~l~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~ip~~~~~ 279 (596)
+ ..+++|++|++++|.+++.+|. .+..+++|++|++++|++++..+ ..+..+++|++|+|++|+++.+|..+..
T Consensus 329 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~ 408 (549)
T 2z81_A 329 FSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQW 408 (549)
T ss_dssp HHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCC
T ss_pred HHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcc
Confidence 3 4678888888888888776543 35677888888888888875543 4578888888888888888888888888
Q ss_pred ccccceEEcccCCCCCchhhhh-----------------ccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcc
Q 036342 280 LKDILQLNFSSNFLTGPLLLEI-----------------GNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342 (596)
Q Consensus 280 l~~L~~L~ls~N~l~~~~~~~~-----------------~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l 342 (596)
+++|++|++++|+++....... ..++.|+.||+++|+++ .+|.. ..+++|+.|++++|++
T Consensus 409 ~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~~--~~l~~L~~L~Ls~N~l 485 (549)
T 2z81_A 409 PEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPDA--SLFPVLLVMKISRNQL 485 (549)
T ss_dssp CTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCCG--GGCTTCCEEECCSSCC
T ss_pred cccccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCCc--ccCccCCEEecCCCcc
Confidence 8888888888888764322111 13444455555555554 34431 2344555555555555
Q ss_pred cccCCCC-CCCCCCCcccccccccccC
Q 036342 343 KGEIPRG-GSFGNFSAESFEGNELLCG 368 (596)
Q Consensus 343 ~~~~p~~-~~~~~l~~l~~~~N~~~c~ 368 (596)
++.+|.. ..+++++.+++++|++.|+
T Consensus 486 ~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 486 KSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp CCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred CCcCHHHHhcCcccCEEEecCCCccCC
Confidence 5444432 3344555555555555443
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=373.56 Aligned_cols=143 Identities=24% Similarity=0.295 Sum_probs=101.3
Q ss_pred CCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccC
Q 036342 2 IPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFN 81 (596)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (596)
||..+. +++++|+|++|+++++.+.+|..+++|++|||++|++++ +++..+..+++|++|+|++|++++..|.+|.+
T Consensus 22 ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~-i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 98 (570)
T 2z63_A 22 IPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT-IEDGAYQSLSHLSTLILTGNPIQSLALGAFSG 98 (570)
T ss_dssp CCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCc-cCcccccCchhCCEEeCcCCcCCccCHhhhcC
Confidence 566553 467778888877777777777777778888888777763 44444455777788888777777666677777
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCcc
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGI 151 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~ 151 (596)
+++|++|++++|+++++.+..|+++++|++|++++|.++.+. ++..|.++++|++|++++|.+++.
T Consensus 99 l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~----lp~~~~~l~~L~~L~l~~n~l~~~ 164 (570)
T 2z63_A 99 LSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFK----LPEYFSNLTNLEHLDLSSNKIQSI 164 (570)
T ss_dssp CTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCC----CCGGGGGCTTCCEEECTTSCCCEE
T ss_pred ccccccccccccccccCCCccccccccccEEecCCCccceec----ChhhhcccCCCCEEeCcCCcccee
Confidence 777777777777777766666777777777777777776532 223466777777777777776654
No 14
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.2e-41 Score=379.82 Aligned_cols=353 Identities=24% Similarity=0.251 Sum_probs=241.1
Q ss_pred CCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCcccc-----ccCc----cccCC
Q 036342 12 LEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSG-----TIPR----FIFNA 82 (596)
Q Consensus 12 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~~----~~~~l 82 (596)
|++|+|++|++++..|.+|..+++|++|+|++|++++.++ ..+..+++|+.|++++|...+ .+|. .|..+
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFS-HSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECT-TTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccCh-hhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 4444444444444444444444444445544444443222 122234444455444443221 1111 44455
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCC--CCCCCEEECcCCCCCccCCchhhhcc
Q 036342 83 SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSN--CKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~--l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++|++|++++|+++++.+..|.++++|++|++++|.++..... ...|.. .++|+.|++++|+++++.+. .+..+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~---~~~f~~~~~~~L~~L~L~~n~l~~~~~~-~~~~l 404 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLT---NETFVSLAHSPLHILNLTKNKISKIESD-AFSWL 404 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEEC---TTTTGGGTTSCCCEEECTTSCCCEECTT-TTTTC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcc---hhhhcccccCcCceEECCCCCCCeEChh-hhhCC
Confidence 5555555555555555555555555555555555543221000 001211 24566666666776666554 55555
Q ss_pred cccccEEEccccccccccC-hhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCccc--ccCccchhcCCCCc
Q 036342 161 SRSLEEFYMYNCNISGGIP-EEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILE--GSIPDDICRLAELY 237 (596)
Q Consensus 161 ~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~ 237 (596)
++|++|++++|.+++.+| ..|.++++|++|++++|++.+..+..|..+++|+.|++++|.++ +.+|..+..+++|+
T Consensus 405 -~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~ 483 (680)
T 1ziw_A 405 -GHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLT 483 (680)
T ss_dssp -TTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCC
T ss_pred -CCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCC
Confidence 567777777777776544 56777777777777777777777777777778888888887775 46788888999999
Q ss_pred EEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc---------ccccccccceEEcccCCCCCchhhhhccccccc
Q 036342 238 RLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL---------TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLI 308 (596)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~---------~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~ 308 (596)
.|++++|++++..+..|.++++|++|+|++|+++.++. .+..+++|++|++++|+++...+..|.++++|+
T Consensus 484 ~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~ 563 (680)
T 1ziw_A 484 ILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELK 563 (680)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred EEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcc
Confidence 99999999998888889999999999999999987632 267889999999999999977777899999999
Q ss_pred eEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-C-CCCCCCcccccccccccCCCC
Q 036342 309 GIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-G-SFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 309 ~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~-~~~~l~~l~~~~N~~~c~~~~ 371 (596)
.||+++|+++ .+|...+..+++|+.|++++|++++..|.. . .+++++.+++++|||.|+++.
T Consensus 564 ~L~Ls~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 564 IIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp EEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred eeECCCCCCC-cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 9999999999 566667888999999999999999876654 2 578899999999999998874
No 15
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-40 Score=368.02 Aligned_cols=364 Identities=20% Similarity=0.164 Sum_probs=295.2
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCcccc-ccCccccC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSG-TIPRFIFN 81 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~ 81 (596)
|..|+++++|++|+|++|++++..|.+|..+++|++|+|++|++++ +++..+..+++|++|+|++|.+++ .+|..|.+
T Consensus 73 ~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~ 151 (606)
T 3vq2_A 73 DKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS-LESFPIGQLITLKKLNVAHNFIHSCKLPAYFSN 151 (606)
T ss_dssp TTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCC-SSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGT
T ss_pred HHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccc-ccccccCCCCCCCEEeCCCCcccceechHhHhh
Confidence 6779999999999999999999999999999999999999999984 454445679999999999999986 56999999
Q ss_pred CCCCCEEEccCCcccccCCccccCCC------------------------------------------------------
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLR------------------------------------------------------ 107 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~------------------------------------------------------ 107 (596)
+++|++|+|++|++++..+..|..+.
T Consensus 152 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L 231 (606)
T 3vq2_A 152 LTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGL 231 (606)
T ss_dssp CTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTC
T ss_pred cCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHHhcccccc
Confidence 99999999999999887766443332
Q ss_pred ----------------------------------------------------------------------------CCCE
Q 036342 108 ----------------------------------------------------------------------------NLEQ 111 (596)
Q Consensus 108 ----------------------------------------------------------------------------~L~~ 111 (596)
+|++
T Consensus 232 ~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~ 311 (606)
T 3vq2_A 232 HVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQS 311 (606)
T ss_dssp EEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSE
T ss_pred ccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhhhhccccccCCE
Confidence 2233
Q ss_pred EecCCCcCcCCCCC--------------ccccccCCCCCCCCEEECcCCCCCccC--CchhhhcccccccEEEccccccc
Q 036342 112 LGLDENYLTSSTPE--------------LSFLSSLSNCKSLTLIDLSNNPLDGIL--PKTSISNLSRSLEEFYMYNCNIS 175 (596)
Q Consensus 112 L~l~~N~l~~~~~~--------------~~~~~~~~~l~~L~~L~ls~N~l~~~~--~~~~~~~l~~~L~~L~l~~n~l~ 175 (596)
|++++|.+..++.- ......+..+++|++|++++|.+++.. +. .+..+ ++|++|++++|.++
T Consensus 312 L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~-~~~~~-~~L~~L~L~~n~l~ 389 (606)
T 3vq2_A 312 LSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSY-SDLGT-NSLRHLDLSFNGAI 389 (606)
T ss_dssp EEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCH-HHHCC-SCCCEEECCSCSEE
T ss_pred EEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhh-hhccC-CcccEeECCCCccc
Confidence 33333333222100 001114567888999999999988763 44 56666 78999999999998
Q ss_pred cccChhccCCCCCCEEEccCCcccCCCC-ccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcc-cchhh
Q 036342 176 GGIPEEISNLTNLVEIDLGGNKLNGSIP-ITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG-SIPAC 253 (596)
Q Consensus 176 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~ 253 (596)
+ +|..|..+++|++|++++|.+.+..| ..|..+++|++|++++|.+++..|..+..+++|++|++++|++++ .+|..
T Consensus 390 ~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 468 (606)
T 3vq2_A 390 I-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNV 468 (606)
T ss_dssp E-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSC
T ss_pred c-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHh
Confidence 6 56889999999999999999998887 789999999999999999999999999999999999999999987 47889
Q ss_pred hccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCC-C
Q 036342 254 FGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLS-Y 331 (596)
Q Consensus 254 ~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~-~ 331 (596)
|..+++|+.|+|++|.++++ |..+..+++|++|++++|++++..|..+..+++|+.||+++|+++ .+|.. +..++ +
T Consensus 469 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~-~~~l~~~ 546 (606)
T 3vq2_A 469 FANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGI-LQHFPKS 546 (606)
T ss_dssp CTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESC-GGGSCTT
T ss_pred hccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHh-Hhhhccc
Confidence 99999999999999999985 567889999999999999999999999999999999999999999 67775 55676 6
Q ss_pred CCeEECCCCcccccCCCCC---CCCCCCcccccccccccCCCCC
Q 036342 332 LEDLNLSFNKLKGEIPRGG---SFGNFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 332 L~~L~l~~N~l~~~~p~~~---~~~~l~~l~~~~N~~~c~~~~~ 372 (596)
|+.|++++|++.|.++... .+..-...........|..|..
T Consensus 547 L~~l~l~~N~~~c~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~ 590 (606)
T 3vq2_A 547 LAFFNLTNNSVACICEHQKFLQWVKEQKQFLVNVEQMTCATPVE 590 (606)
T ss_dssp CCEEECCSCCCCCSSTTHHHHTTTTTSSSSBSSGGGCCCC----
T ss_pred CcEEEccCCCcccCCccHHHHHHHHcCcccccCCccceeCCChH
Confidence 9999999999998777532 1222122222344556766543
No 16
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.4e-41 Score=368.04 Aligned_cols=349 Identities=25% Similarity=0.286 Sum_probs=277.2
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||.++. ++|++|+|++|+|+++.|.+|..+++|++|+|++|++++ +++..+..+++|++|||++|+++ .+|..
T Consensus 45 ~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~-- 118 (562)
T 3a79_B 45 HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRS-LDFHVFLFNQDLEYLDVSHNRLQ-NISCC-- 118 (562)
T ss_dssp SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCE-ECTTTTTTCTTCCEEECTTSCCC-EECSC--
T ss_pred cCCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCc-CCHHHhCCCCCCCEEECCCCcCC-ccCcc--
Confidence 3677664 789999999999998888899999999999999999985 44444556899999999999998 56665
Q ss_pred CCCCCCEEEccCCccccc-CCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCC--CEEECcCCCC--CccCCch
Q 036342 81 NASKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSL--TLIDLSNNPL--DGILPKT 155 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L--~~L~ls~N~l--~~~~~~~ 155 (596)
.+++|++|+|++|+|+++ .|..|.++++|++|++++|.++.. .+..+++| +.|++++|.+ ++..|.
T Consensus 119 ~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--------~~~~l~~L~L~~L~L~~n~l~~~~~~~~- 189 (562)
T 3a79_B 119 PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--------DLLPVAHLHLSCILLDLVSYHIKGGETE- 189 (562)
T ss_dssp CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--------TTGGGTTSCEEEEEEEESSCCCCSSSCC-
T ss_pred ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC--------chhhhhhceeeEEEeecccccccccCcc-
Confidence 889999999999999875 368899999999999999988762 24444555 8888888888 555443
Q ss_pred hhhccc--------------------------------------------------------------------------
Q 036342 156 SISNLS-------------------------------------------------------------------------- 161 (596)
Q Consensus 156 ~~~~l~-------------------------------------------------------------------------- 161 (596)
.+..+.
T Consensus 190 ~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~ 269 (562)
T 3a79_B 190 SLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKL 269 (562)
T ss_dssp EEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHH
T ss_pred cccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHH
Confidence 222210
Q ss_pred ------ccccEEEccccccccccChhc-----cCC--------------------------CCCCEEEccCCcccCCCCc
Q 036342 162 ------RSLEEFYMYNCNISGGIPEEI-----SNL--------------------------TNLVEIDLGGNKLNGSIPI 204 (596)
Q Consensus 162 ------~~L~~L~l~~n~l~~~~~~~~-----~~l--------------------------~~L~~L~Ls~N~l~~~~p~ 204 (596)
++|++|++++|.+++.+|..+ ..+ .+|+.|++++|.+....
T Consensus 270 ~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~-- 347 (562)
T 3a79_B 270 FQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV-- 347 (562)
T ss_dssp HHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--
T ss_pred HHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--
Confidence 156667777777766666554 222 23555555555554221
Q ss_pred cccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCccc--chhhhccCCCCcEEEeCCCcccC-CCcc-cccc
Q 036342 205 TLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGS--IPACFGNLASLRILSLGSNKLTS-IPLT-FWNL 280 (596)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~-ip~~-~~~l 280 (596)
....+++|++|++++|.+++.+|..+..+++|+.|++++|++++. .|..|..+++|+.|+|++|.+++ +|.. +..+
T Consensus 348 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l 427 (562)
T 3a79_B 348 CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWA 427 (562)
T ss_dssp CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCC
T ss_pred CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCc
Confidence 126789999999999999988999999999999999999999873 45779999999999999999998 8875 7789
Q ss_pred cccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC-CCCCCCCCccc
Q 036342 281 KDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR-GGSFGNFSAES 359 (596)
Q Consensus 281 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~~~~~~l~~l~ 359 (596)
++|++|++++|++++..+..+. +.|+.||+++|+++ .+|..++ .+++|++|++++|+++..++. ...+++++.++
T Consensus 428 ~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~-~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~ 503 (562)
T 3a79_B 428 ESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVT-HLQALQELNVASNQLKSVPDGVFDRLTSLQYIW 503 (562)
T ss_dssp TTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTT-SSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEE
T ss_pred ccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhc-CCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEE
Confidence 9999999999999987776654 78999999999999 6888666 899999999999999965444 35688999999
Q ss_pred ccccccccCCC
Q 036342 360 FEGNELLCGSP 370 (596)
Q Consensus 360 ~~~N~~~c~~~ 370 (596)
+++|+|.|+++
T Consensus 504 l~~N~~~c~c~ 514 (562)
T 3a79_B 504 LHDNPWDCTCP 514 (562)
T ss_dssp CCSCCBCCCHH
T ss_pred ecCCCcCCCcc
Confidence 99999999665
No 17
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-41 Score=360.36 Aligned_cols=348 Identities=21% Similarity=0.243 Sum_probs=302.9
Q ss_pred CCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEcc
Q 036342 12 LEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLG 91 (596)
Q Consensus 12 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 91 (596)
-+.++.++++++ .+|..+ .+++++|||++|++++ +++..+..+++|++|+|++|.+++..|.+|.++++|++|+|+
T Consensus 13 ~~~v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TTEEECCSCCCS-SCCSCC--CTTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcC-cCCCCC--CCCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 468999999987 566655 4689999999999985 444445569999999999999998889999999999999999
Q ss_pred CCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccc
Q 036342 92 MNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYN 171 (596)
Q Consensus 92 ~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~ 171 (596)
+|+|+.+.+..|.++++|++|+|++|.++.+.+. .|.++++|+.|++++|.+++..+. .+..+ ++|++|++++
T Consensus 89 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l-~~L~~L~l~~ 161 (477)
T 2id5_A 89 SNRLKLIPLGVFTGLSNLTKLDISENKIVILLDY-----MFQDLYNLKSLEVGDNDLVYISHR-AFSGL-NSLEQLTLEK 161 (477)
T ss_dssp SSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCEEEECCTTCCEECTT-SSTTC-TTCCEEEEES
T ss_pred CCcCCccCcccccCCCCCCEEECCCCccccCChh-----HccccccCCEEECCCCccceeChh-hccCC-CCCCEEECCC
Confidence 9999988888899999999999999999886554 589999999999999999887665 67777 7899999999
Q ss_pred cccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccch
Q 036342 172 CNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIP 251 (596)
Q Consensus 172 n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 251 (596)
|.+++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|+++...+
T Consensus 162 n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 241 (477)
T 2id5_A 162 CNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPY 241 (477)
T ss_dssp CCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCH
T ss_pred CcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCH
Confidence 99998888889999999999999999999888899999999999999998887888887777899999999999997777
Q ss_pred hhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCC
Q 036342 252 ACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLS 330 (596)
Q Consensus 252 ~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~ 330 (596)
..|..+++|+.|+|++|.++.++. .+..+++|+.|+|++|++++..+..|..+++|+.||+++|++++ ++...+..++
T Consensus 242 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~ 320 (477)
T 2id5_A 242 LAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTT-LEESVFHSVG 320 (477)
T ss_dssp HHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSC-CCGGGBSCGG
T ss_pred HHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCce-eCHhHcCCCc
Confidence 889999999999999999999765 57889999999999999999999999999999999999999995 5666778899
Q ss_pred CCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCC
Q 036342 331 YLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 331 ~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
+|++|++++|++.+.++....+.......+.++...|..|.
T Consensus 321 ~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 321 NLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp GCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred ccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 99999999999998765433333444566778888887765
No 18
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.5e-40 Score=366.69 Aligned_cols=361 Identities=21% Similarity=0.261 Sum_probs=286.8
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||+++. +++++|||++|+|+++.+.+|.++++|++|||++|+|+ .+++.+|..+++|++|+|++|+|++..+.+|.
T Consensus 45 ~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~-~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~ 121 (635)
T 4g8a_A 45 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQ-TIEDGAYQSLSHLSTLILTGNPIQSLALGAFS 121 (635)
T ss_dssp SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCC-EECTTTTTTCTTCCEEECTTCCCCEECGGGGT
T ss_pred ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCC-CcChhHhcCCCCCCEEEccCCcCCCCCHHHhc
Confidence 4677663 58899999999999888889999999999999999998 56666667799999999999999977778899
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|+|+++.+..|+++++|++|++++|.++.... +..+..+++|++|++++|+|++..+. .+..+
T Consensus 122 ~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~L 196 (635)
T 4g8a_A 122 GLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKL----PEYFSNLTNLEHLDLSSNKIQSIYCT-DLRVL 196 (635)
T ss_dssp TCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCC----CGGGGGCTTCCEEECCSSCCCEECGG-GGHHH
T ss_pred CCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCC----chhhccchhhhhhcccCccccccccc-cccch
Confidence 99999999999999999888899999999999999999987532 23578889999999999988765432 11111
Q ss_pred c-------------------------------------------------------------------------------
Q 036342 161 S------------------------------------------------------------------------------- 161 (596)
Q Consensus 161 ~------------------------------------------------------------------------------- 161 (596)
.
T Consensus 197 ~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~ 276 (635)
T 4g8a_A 197 HQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALE 276 (635)
T ss_dssp HTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTG
T ss_pred hhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccc
Confidence 0
Q ss_pred ---------------------------------------------------ccccEEEccccccccccCh----------
Q 036342 162 ---------------------------------------------------RSLEEFYMYNCNISGGIPE---------- 180 (596)
Q Consensus 162 ---------------------------------------------------~~L~~L~l~~n~l~~~~~~---------- 180 (596)
..++.|++.+|.+.+..+.
T Consensus 277 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l 356 (635)
T 4g8a_A 277 GLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTF 356 (635)
T ss_dssp GGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEE
T ss_pred cccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhccc
Confidence 0122333333333222111
Q ss_pred ---------hccCCCCCCEEEccCCcccCC--C-----------------------CccccCCCCCCeEEccCCcccccC
Q 036342 181 ---------EISNLTNLVEIDLGGNKLNGS--I-----------------------PITLGKLRKLQRLNLEDNILEGSI 226 (596)
Q Consensus 181 ---------~~~~l~~L~~L~Ls~N~l~~~--~-----------------------p~~~~~l~~L~~L~L~~N~l~~~~ 226 (596)
.+..+++|+.|++++|.+... . +..+..+++|+.++++.|......
T Consensus 357 ~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~ 436 (635)
T 4g8a_A 357 TSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMS 436 (635)
T ss_dssp ESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTT
T ss_pred ccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccc
Confidence 112356777788887776421 1 234556667777777777665444
Q ss_pred c-cchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC--CCcccccccccceEEcccCCCCCchhhhhcc
Q 036342 227 P-DDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS--IPLTFWNLKDILQLNFSSNFLTGPLLLEIGN 303 (596)
Q Consensus 227 ~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 303 (596)
+ ..+..+.+++.++++.|.+.+..+..+..+++|+.|+|++|.+.. +|..+..+++|++|+|++|++++..|..|.+
T Consensus 437 ~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~ 516 (635)
T 4g8a_A 437 EFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNS 516 (635)
T ss_dssp SSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcC
Confidence 3 456778999999999999999999999999999999999998654 6778999999999999999999999999999
Q ss_pred ccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-CCC-CCCCcccccccccccCCC
Q 036342 304 LKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-GSF-GNFSAESFEGNELLCGSP 370 (596)
Q Consensus 304 l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~-~~l~~l~~~~N~~~c~~~ 370 (596)
+++|++|+|++|+|++..|. .+..+++|+.|||++|++++..|.. ..+ ++++.+++++|||.|++.
T Consensus 517 l~~L~~L~Ls~N~l~~l~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 517 LSSLQVLNMSHNNFFSLDTF-PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CTTCCEEECTTSCCCBCCCG-GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCCCEEECCCCcCCCCChh-HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99999999999999965554 7788999999999999999988876 334 689999999999999765
No 19
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-40 Score=354.08 Aligned_cols=340 Identities=23% Similarity=0.214 Sum_probs=292.5
Q ss_pred CCcccCCCCCCCEEECCCCCCcccc-chhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcc--
Q 036342 2 IPLEIGNLQNLEELQLGQNKLIGTV-PAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRF-- 78 (596)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-- 78 (596)
.|..|+++++|++|+|++|++.+.+ +..|..+++|++|+|++|++++..+. .+..+++|++|+|++|++++..+..
T Consensus 46 ~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~~~ 124 (455)
T 3v47_A 46 NETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETG-AFNGLANLEVLTLTQCNLDGAVLSGNF 124 (455)
T ss_dssp CTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTT-TTTTCTTCCEEECTTSCCBTHHHHSST
T ss_pred ChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChh-hccCcccCCEEeCCCCCCCccccCccc
Confidence 3778999999999999999997444 67899999999999999999855443 3456999999999999999755554
Q ss_pred ccCCCCCCEEEccCCcccccCCcc-ccCCCCCCEEecCCCcCcCCCCCccccccCCCC--CCCCEEECcCCCCCccCCch
Q 036342 79 IFNASKLSKLSLGMNSFSGFIPST-FGNLRNLEQLGLDENYLTSSTPELSFLSSLSNC--KSLTLIDLSNNPLDGILPKT 155 (596)
Q Consensus 79 ~~~l~~L~~L~L~~N~i~~~~~~~-~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l--~~L~~L~ls~N~l~~~~~~~ 155 (596)
+.++++|++|+|++|++++..|.. |.++++|++|++++|.+++..+. .+..+ .+|+.|++++|.+.+..+..
T Consensus 125 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~l~~l~~~~L~~L~l~~n~l~~~~~~~ 199 (455)
T 3v47_A 125 FKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEE-----DLLNFQGKHFTLLRLSSITLQDMNEYW 199 (455)
T ss_dssp TTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTT-----TSGGGTTCEEEEEECTTCBCTTCSTTC
T ss_pred ccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChh-----hhhccccccccccccccCcccccchhh
Confidence 999999999999999999988876 89999999999999999987654 34444 68999999999998764321
Q ss_pred -------hhhcccccccEEEccccccccccChhccCC---CCCCEEEccCCcccCC----------CCccccC--CCCCC
Q 036342 156 -------SISNLSRSLEEFYMYNCNISGGIPEEISNL---TNLVEIDLGGNKLNGS----------IPITLGK--LRKLQ 213 (596)
Q Consensus 156 -------~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~----------~p~~~~~--l~~L~ 213 (596)
.+..+ ++|++|++++|.+++..|..+... ++|+.|++++|.+.+. .+..+.+ .++|+
T Consensus 200 ~~~~~~~~~~~~-~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 278 (455)
T 3v47_A 200 LGWEKCGNPFKN-TSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVK 278 (455)
T ss_dssp TTHHHHCCTTTT-CEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCC
T ss_pred cccccccccccc-ceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCce
Confidence 01123 579999999999999888887665 8999999999865542 2233333 36899
Q ss_pred eEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCC
Q 036342 214 RLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNF 292 (596)
Q Consensus 214 ~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~ 292 (596)
+|++++|.+++..|..+..+++|+.|+|++|++++..|..|.++++|++|+|++|.++++ |..+..+++|++|++++|+
T Consensus 279 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 358 (455)
T 3v47_A 279 TCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNH 358 (455)
T ss_dssp EEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSC
T ss_pred EEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCc
Confidence 999999999999999999999999999999999998899999999999999999999986 5678899999999999999
Q ss_pred CCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC
Q 036342 293 LTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG 349 (596)
Q Consensus 293 l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 349 (596)
+++..+..+..+++|++|++++|++++ +|...+..+++|++|++++|++++.+|..
T Consensus 359 l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 414 (455)
T 3v47_A 359 IRALGDQSFLGLPNLKELALDTNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPRI 414 (455)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCSC-CCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccChhhccccccccEEECCCCcccc-CCHhHhccCCcccEEEccCCCcccCCCcc
Confidence 999999999999999999999999995 56657788999999999999999988854
No 20
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.1e-39 Score=363.80 Aligned_cols=306 Identities=24% Similarity=0.233 Sum_probs=185.9
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||.++. +++++|+|++|+++++.+..|..+++|++|+|++|.+++..+. .+..+++|++|+|++|++++..+.+|.
T Consensus 18 ~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~n~l~~l~~~~~~ 94 (680)
T 1ziw_A 18 QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPE-LCQKLPMLKVLNLQHNELSQLSDKTFA 94 (680)
T ss_dssp SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTT-HHHHCTTCCEEECCSSCCCCCCTTTTT
T ss_pred ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHH-HHhcccCcCEEECCCCccCccChhhhc
Confidence 3566554 6777777777777776667777777777777777777643333 333477777777777777755555677
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|+++++.|..|.++++|++|++++|.+++..+. .+.++++|++|++++|.+++..+. .+..+
T Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~-~~~~~ 168 (680)
T 1ziw_A 95 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLG-----TQVQLENLQELLLSNNKIQALKSE-ELDIF 168 (680)
T ss_dssp TCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCC-----SSSCCTTCCEEECCSSCCCCBCHH-HHGGG
T ss_pred cCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCch-----hhcccccCCEEEccCCcccccCHH-Hhhcc
Confidence 777777777777777777777777777777777777777665443 466777777777777777665433 22211
Q ss_pred -cccccEEEccccccccccChhccCC---------------------------CCCCEEEccCCcccCCCCccccCCCC-
Q 036342 161 -SRSLEEFYMYNCNISGGIPEEISNL---------------------------TNLVEIDLGGNKLNGSIPITLGKLRK- 211 (596)
Q Consensus 161 -~~~L~~L~l~~n~l~~~~~~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~- 211 (596)
.++|++|++++|.+++..|..|..+ ++|+.|++++|.+.+..|.+|.+++.
T Consensus 169 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~ 248 (680)
T 1ziw_A 169 ANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWT 248 (680)
T ss_dssp TTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGS
T ss_pred ccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcC
Confidence 1456677777776666665555432 34555556666666555555555533
Q ss_pred -CCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc------CCCc----ccccc
Q 036342 212 -LQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT------SIPL----TFWNL 280 (596)
Q Consensus 212 -L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~------~ip~----~~~~l 280 (596)
|++|++++|.+++..|..|..+++|++|++++|++.+..|..|.++++|+.|++++|... .+|. .+..+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 666666666666555555666666666666666666555555555555555555544322 1221 34444
Q ss_pred cccceEEcccCCCCCchhhhhccccccceEecCCC
Q 036342 281 KDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMN 315 (596)
Q Consensus 281 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N 315 (596)
++|++|++++|.+++..+..|..+++|+.|++++|
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 363 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNS 363 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCC
Confidence 55555555555555444444444444444444443
No 21
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.9e-40 Score=373.36 Aligned_cols=349 Identities=18% Similarity=0.193 Sum_probs=292.8
Q ss_pred CCcccC--CCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCc-Ccc-ccCc-c-----CccCCCCccEEEccCCcc
Q 036342 2 IPLEIG--NLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNS-LSG-SLSS-I-----ANVRLPNLEKLYLWGNNF 71 (596)
Q Consensus 2 ip~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~-~~~~-~-----~~~~l~~L~~L~L~~N~l 71 (596)
||++++ ++++|++|+|++|++.+.+|..|..+++|++|+|++|+ ++| .+|. + .+..+++|+.|+|++|++
T Consensus 481 iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L 560 (876)
T 4ecn_A 481 ENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNL 560 (876)
T ss_dssp TTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCC
T ss_pred CChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcC
Confidence 899988 99999999999999999999999999999999999998 887 5654 2 233467999999999999
Q ss_pred ccccCc--cccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC-CCEEECcCCCC
Q 036342 72 SGTIPR--FIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS-LTLIDLSNNPL 148 (596)
Q Consensus 72 ~~~~~~--~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~-L~~L~ls~N~l 148 (596)
+ .+|. .+.++++|++|+|++|+|+ .+| .|..+++|++|+|++|.++.++. .+.++++ |+.|+|++|.+
T Consensus 561 ~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~~lp~------~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 561 E-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIEEIPE------DFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp C-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCSCCCT------TSCEECTTCCEEECCSSCC
T ss_pred C-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccccchH------HHhhccccCCEEECcCCCC
Confidence 9 8888 9999999999999999999 666 89999999999999999986443 5888999 99999999999
Q ss_pred CccCCchhhhccc-ccccEEEccccccccccChhc---c--CCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcc
Q 036342 149 DGILPKTSISNLS-RSLEEFYMYNCNISGGIPEEI---S--NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNIL 222 (596)
Q Consensus 149 ~~~~~~~~~~~l~-~~L~~L~l~~n~l~~~~~~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 222 (596)
+ .+|. .+.... ++|+.|++++|.+++.+|... . .+++|+.|++++|.++..++..+..+++|+.|+|++|.|
T Consensus 632 ~-~lp~-~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L 709 (876)
T 4ecn_A 632 K-YIPN-IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLM 709 (876)
T ss_dssp C-SCCS-CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCC
T ss_pred C-cCch-hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcC
Confidence 8 4564 444442 349999999999998766433 2 345899999999999965555566899999999999999
Q ss_pred cccCccchhcC--------CCCcEEEccCCcCcccchhhhc--cCCCCcEEEeCCCcccCCCcccccccccceEEccc--
Q 036342 223 EGSIPDDICRL--------AELYRLELGSNKLYGSIPACFG--NLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSS-- 290 (596)
Q Consensus 223 ~~~~~~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~-- 290 (596)
+ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+++++|..+..+++|+.|+|++
T Consensus 710 ~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~ 787 (876)
T 4ecn_A 710 T-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQR 787 (876)
T ss_dssp S-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCB
T ss_pred C-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCC
Confidence 9 677655443 38999999999999 6777776 99999999999999999999999999999999977
Q ss_pred ----CCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCC-CCCCCCccccccccc
Q 036342 291 ----NFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGG-SFGNFSAESFEGNEL 365 (596)
Q Consensus 291 ----N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~~~l~~l~~~~N~~ 365 (596)
|++.+.+|..+..+++|+.|+|++|++ +.+|..+. ++|+.|||++|++....+... .......+.+.+|++
T Consensus 788 ~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~---~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~ 863 (876)
T 4ecn_A 788 DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT---PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKT 863 (876)
T ss_dssp CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC---SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTT
T ss_pred CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc---CCCCEEECCCCCCCccChHHccccccchheeecCCCc
Confidence 888899999999999999999999999 58888533 689999999999876544321 122334456666665
Q ss_pred cc
Q 036342 366 LC 367 (596)
Q Consensus 366 ~c 367 (596)
.+
T Consensus 864 ~~ 865 (876)
T 4ecn_A 864 QD 865 (876)
T ss_dssp SE
T ss_pred cc
Confidence 54
No 22
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-39 Score=347.93 Aligned_cols=336 Identities=21% Similarity=0.157 Sum_probs=294.3
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||..+. +++++|+|++|+|+++.+..|..+++|++|+|++|.+++ +.+..+..+++|++|+|++|+++...+..|.
T Consensus 25 ~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 101 (477)
T 2id5_A 25 AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSA-VEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT 101 (477)
T ss_dssp SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCSCCTTSST
T ss_pred cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCE-eChhhhhCCccCCEEECCCCcCCccCccccc
Confidence 4677664 689999999999999999999999999999999999985 4444455699999999999999977777899
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|++++..+..|.++++|++|++++|.++.+.+. .|.++++|+.|++++|.+++.. ...+..+
T Consensus 102 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~-~~~l~~l 175 (477)
T 2id5_A 102 GLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHR-----AFSGLNSLEQLTLEKCNLTSIP-TEALSHL 175 (477)
T ss_dssp TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTT-----SSTTCTTCCEEEEESCCCSSCC-HHHHTTC
T ss_pred CCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChh-----hccCCCCCCEEECCCCcCcccC-hhHhccc
Confidence 999999999999999999999999999999999999999887654 6899999999999999998754 4467777
Q ss_pred cccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEE
Q 036342 161 SRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240 (596)
Q Consensus 161 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (596)
++|+.|++++|.+++..+..|..+++|+.|++++|.+.+.+|.......+|+.|++++|.+++..+..+..+++|+.|+
T Consensus 176 -~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 254 (477)
T 2id5_A 176 -HGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLN 254 (477)
T ss_dssp -TTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEE
T ss_pred -CCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeE
Confidence 7899999999999999999999999999999999998877777777777999999999999965556789999999999
Q ss_pred ccCCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcc
Q 036342 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSG 319 (596)
Q Consensus 241 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~ 319 (596)
|++|++++..+..|..+++|+.|+|++|+++.+ |..+..+++|+.|++++|++++..+..|..+++|+.|++++|.+..
T Consensus 255 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 255 LSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 999999988888999999999999999999996 6688899999999999999999988899999999999999999985
Q ss_pred cCChhhhccCCCCCeEECCCCcccccCCC
Q 036342 320 VIPREIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 320 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
.-+..++ ...+..+++.++...+..|.
T Consensus 335 ~c~~~~~--~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 335 DCRLLWV--FRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp SGGGHHH--HTTTTSSCCTTCCCBEEESG
T ss_pred ccchHhH--HhhhhccccCccCceeCCch
Confidence 4333222 23345566677777766554
No 23
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=356.37 Aligned_cols=361 Identities=21% Similarity=0.215 Sum_probs=278.3
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNA 82 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (596)
|.+|..+++|++|+|++|+++++.|.+|..+++|++|+|++|++++ +++..+..+++|++|++++|++++..+..+.++
T Consensus 45 ~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l 123 (570)
T 2z63_A 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQS-LALGAFSGLSSLQKLVAVETNLASLENFPIGHL 123 (570)
T ss_dssp TTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCE-ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTC
T ss_pred hhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCc-cCHhhhcCccccccccccccccccCCCcccccc
Confidence 4468888999999999999888888888888999999999998874 444445568888888888888886666578888
Q ss_pred CCCCEEEccCCccccc-CCccccCCCCCCEEecCCCcCcCCCCCc-c---------------------------------
Q 036342 83 SKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENYLTSSTPEL-S--------------------------------- 127 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~--------------------------------- 127 (596)
++|++|+|++|.++++ .|..|.++++|++|++++|.++...+.. .
T Consensus 124 ~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~ 203 (570)
T 2z63_A 124 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 203 (570)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEE
T ss_pred ccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcce
Confidence 8888888888888774 5788888888888888888876643220 0
Q ss_pred ----------------------------------------------------------------------ccccCCCCCC
Q 036342 128 ----------------------------------------------------------------------FLSSLSNCKS 137 (596)
Q Consensus 128 ----------------------------------------------------------------------~~~~~~~l~~ 137 (596)
.+..+..+++
T Consensus 204 ~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~ 283 (570)
T 2z63_A 204 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTN 283 (570)
T ss_dssp EEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTT
T ss_pred eEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCc
Confidence 0011222334
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccc---------------------cccChhccCCCCCCEEEccCC
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNIS---------------------GGIPEEISNLTNLVEIDLGGN 196 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~---------------------~~~~~~~~~l~~L~~L~Ls~N 196 (596)
|+.|++++|.+++ +|. .+..+ +|++|++++|.++ +..+. ..+++|++|++++|
T Consensus 284 L~~L~l~~~~l~~-l~~-~~~~~--~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n 357 (570)
T 2z63_A 284 VSSFSLVSVTIER-VKD-FSYNF--GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRN 357 (570)
T ss_dssp CSEEEEESCEECS-CCB-CCSCC--CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSS
T ss_pred ccEEEecCccchh-hhh-hhccC--CccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCC
Confidence 4444444444332 121 11111 2333333333333 22221 56789999999999
Q ss_pred cccCCC--CccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccch-hhhccCCCCcEEEeCCCcccC-
Q 036342 197 KLNGSI--PITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIP-ACFGNLASLRILSLGSNKLTS- 272 (596)
Q Consensus 197 ~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~- 272 (596)
.+++.. |..+..+++|++|++++|.+++. +..+..+++|+.|++++|.+.+..| ..+..+++|++|++++|.++.
T Consensus 358 ~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 436 (570)
T 2z63_A 358 GLSFKGCCSQSDFGTTSLKYLDLSFNGVITM-SSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVA 436 (570)
T ss_dssp CCBEEEEEEHHHHTCSCCCEEECCSCSEEEE-EEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEEC
T ss_pred ccCccccccccccccCccCEEECCCCccccc-cccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCccccc
Confidence 998764 77889999999999999999954 4459999999999999999987766 578999999999999999998
Q ss_pred CCcccccccccceEEcccCCCC-CchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC-C
Q 036342 273 IPLTFWNLKDILQLNFSSNFLT-GPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG-G 350 (596)
Q Consensus 273 ip~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~ 350 (596)
.|..+..+++|++|++++|.++ +..|..+..+++|+.|++++|++++..|. .+..+++|++|++++|++++.+|.. .
T Consensus 437 ~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~l~~n~l~~~~~~~~~ 515 (570)
T 2z63_A 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT-AFNSLSSLQVLNMASNQLKSVPDGIFD 515 (570)
T ss_dssp CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred chhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChh-hhhcccCCCEEeCCCCcCCCCCHHHhh
Confidence 5667889999999999999998 67889999999999999999999977676 6678999999999999999887765 5
Q ss_pred CCCCCCcccccccccccCCCCC
Q 036342 351 SFGNFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 351 ~~~~l~~l~~~~N~~~c~~~~~ 372 (596)
.+++++.+++++|++.|++|..
T Consensus 516 ~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 516 RLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp TCTTCCEEECCSSCBCCCTTTT
T ss_pred cccCCcEEEecCCcccCCCcch
Confidence 6889999999999999987754
No 24
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=8.1e-39 Score=334.59 Aligned_cols=337 Identities=20% Similarity=0.201 Sum_probs=289.7
Q ss_pred CCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCE
Q 036342 8 NLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSK 87 (596)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (596)
.++++++|++++|.++.+.+..|..+++|++|+|++|.+++ ++...+..+++|++|+|++|.+++..|..|.++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccc-cChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 46899999999999987777778999999999999999984 55545566999999999999999888889999999999
Q ss_pred EEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEE
Q 036342 88 LSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEF 167 (596)
Q Consensus 88 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L 167 (596)
|+|++|+|+.+.+..|.++++|++|++++|.++.+.+. .+.++++|++|++++|++++. .+..+ ++|+.|
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~----~~~~l-~~L~~L 191 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD-----TFQATTSLQNLQLSSNRLTHV----DLSLI-PSLFHA 191 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT-----TTSSCTTCCEEECCSSCCSBC----CGGGC-TTCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChh-----hccCCCCCCEEECCCCcCCcc----ccccc-ccccee
Confidence 99999999988888889999999999999999987654 589999999999999999876 34455 689999
Q ss_pred EccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 168 YMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 168 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
++++|.+++. ...++|++|++++|.+...... ..++|+.|++++|.+++. ..+..+++|+.|++++|.++
T Consensus 192 ~l~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~ 261 (390)
T 3o6n_A 192 NVSYNLLSTL-----AIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELE 261 (390)
T ss_dssp ECCSSCCSEE-----ECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred eccccccccc-----CCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCC
Confidence 9999999854 3456899999999999865332 357999999999999853 57889999999999999999
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhc
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGE 327 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~ 327 (596)
+..|..|..+++|+.|+|++|+++++|..+..+++|++|++++|++++ +|..+..+++|+.|++++|.++. ++ ..
T Consensus 262 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~-~~---~~ 336 (390)
T 3o6n_A 262 KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVT-LK---LS 336 (390)
T ss_dssp EEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCC-CC---CC
T ss_pred CcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccce-eC---ch
Confidence 988999999999999999999999999888889999999999999995 46668889999999999999985 44 35
Q ss_pred cCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCC
Q 036342 328 KLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 328 ~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
.+++|+.|++++|++++.... ..+..+....+.+++..|..+.
T Consensus 337 ~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~~ 379 (390)
T 3o6n_A 337 THHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 379 (390)
T ss_dssp TTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTTC
T ss_pred hhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecccc
Confidence 788999999999999875432 2344556666777887887543
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-39 Score=348.28 Aligned_cols=326 Identities=22% Similarity=0.257 Sum_probs=268.3
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCcccc-ccCccccC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSG-TIPRFIFN 81 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~ 81 (596)
|..|.++++|++|+|++|+|++..|.+|..+++|++|||++|+++ .+|.. .+++|++|+|++|++++ .+|..|.+
T Consensus 38 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~ 113 (520)
T 2z7x_B 38 TSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGN 113 (520)
T ss_dssp HHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGG
T ss_pred hhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc---ccCCccEEeccCCccccccchhhhcc
Confidence 357999999999999999999999999999999999999999998 45554 48999999999999997 47899999
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCC--CEEecCCCcC--cCCCCCccccccCCC-----------------------
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNL--EQLGLDENYL--TSSTPELSFLSSLSN----------------------- 134 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~l~~N~l--~~~~~~~~~~~~~~~----------------------- 134 (596)
+++|++|+|++|.|++ ..|.++++| ++|++++|.+ ++..+. .+..
T Consensus 114 l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~-----~l~~l~~~~l~l~l~~n~~~~~~~~~~ 185 (520)
T 2z7x_B 114 MSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPE-----GLQDFNTESLHIVFPTNKEFHFILDVS 185 (520)
T ss_dssp CTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTT-----TTTTCCEEEEEEECCSSSCCCCCCCCC
T ss_pred CCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccc-----cccccccceEEEEeccCcchhhhhhhh
Confidence 9999999999999986 457777777 9999999988 332221 1111
Q ss_pred ------------------------------------------------------------CCCCCEEECcCCCCCccCCc
Q 036342 135 ------------------------------------------------------------CKSLTLIDLSNNPLDGILPK 154 (596)
Q Consensus 135 ------------------------------------------------------------l~~L~~L~ls~N~l~~~~~~ 154 (596)
+++|++|++++|++++.+|.
T Consensus 186 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~ 265 (520)
T 2z7x_B 186 VKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDF 265 (520)
T ss_dssp CTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCC
T ss_pred hhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCcccc
Confidence 12677777777777766665
Q ss_pred hhh----hccccc--------------------------ccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCc
Q 036342 155 TSI----SNLSRS--------------------------LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPI 204 (596)
Q Consensus 155 ~~~----~~l~~~--------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 204 (596)
..+ ..+ ++ |+.|++++|.+.... .+..+++|++|++++|.+++..|.
T Consensus 266 ~~~~~~~~~l-~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~ 342 (520)
T 2z7x_B 266 RDFDYSGTSL-KALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFE 342 (520)
T ss_dssp CCCCCCSCCC-CEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTT
T ss_pred chhhcccccC-ceeEeccccccceecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhh
Confidence 221 333 33 555555555554321 126789999999999999998999
Q ss_pred cccCCCCCCeEEccCCcccc--cCccchhcCCCCcEEEccCCcCcccchh-hhccCCCCcEEEeCCCcccC-CCcccccc
Q 036342 205 TLGKLRKLQRLNLEDNILEG--SIPDDICRLAELYRLELGSNKLYGSIPA-CFGNLASLRILSLGSNKLTS-IPLTFWNL 280 (596)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l 280 (596)
.+..+++|++|++++|.+++ .+|..+..+++|++|++++|++++.+|. .+..+++|+.|+|++|.+++ +|..+.
T Consensus 343 ~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-- 420 (520)
T 2z7x_B 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-- 420 (520)
T ss_dssp TCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--
T ss_pred hhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--
Confidence 99999999999999999996 5567899999999999999999984554 58899999999999999976 555543
Q ss_pred cccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCC
Q 036342 281 KDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIP 347 (596)
Q Consensus 281 ~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 347 (596)
++|+.|++++|+++ .+|..+..+++|+.|++++|+++ .+|...+..+++|++|++++|+++|.++
T Consensus 421 ~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 421 PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCC
Confidence 79999999999999 56777779999999999999999 5787667889999999999999998765
No 26
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.2e-38 Score=334.32 Aligned_cols=327 Identities=27% Similarity=0.385 Sum_probs=262.8
Q ss_pred cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCC
Q 036342 6 IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKL 85 (596)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (596)
+..+++|++|+|++|++++..+ +..+++|++|+|++|.+++.. + +..+++|++|+|++|.+++..+ +.++++|
T Consensus 64 ~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 136 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT-P--LANLTNLTGLTLFNNQITDIDP--LKNLTNL 136 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-G--GTTCTTCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccCh-h--hcCCCCCCEEECCCCCCCCChH--HcCCCCC
Confidence 5667777777777777765544 677777777777777776433 3 3347777777777777774432 6777777
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccccccc
Q 036342 86 SKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165 (596)
Q Consensus 86 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~ 165 (596)
++|++++|.+++.. .+.++++|++|+++ |.+... ..+.++++|+.|++++|.+++.. .+..+ ++|+
T Consensus 137 ~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~-------~~~~~l~~L~~L~l~~n~l~~~~---~l~~l-~~L~ 202 (466)
T 1o6v_A 137 NRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDL-------KPLANLTTLERLDISSNKVSDIS---VLAKL-TNLE 202 (466)
T ss_dssp SEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCC-------GGGTTCTTCCEEECCSSCCCCCG---GGGGC-TTCS
T ss_pred CEEECCCCccCCCh--hhccCCcccEeecC-CcccCc-------hhhccCCCCCEEECcCCcCCCCh---hhccC-CCCC
Confidence 77777777776532 36777777777775 334332 23788999999999999998752 46666 7899
Q ss_pred EEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCc
Q 036342 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNK 245 (596)
Q Consensus 166 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 245 (596)
+|++++|.+++..| +..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|+
T Consensus 203 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 276 (466)
T 1o6v_A 203 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 276 (466)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred EEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCc
Confidence 99999999998766 77899999999999999864 468899999999999999996544 8889999999999999
Q ss_pred CcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhh
Q 036342 246 LYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREI 325 (596)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~ 325 (596)
+++..+ +..+++|+.|+|++|++++++. +..+++|+.|++++|++++..+ +..+++|+.|++++|.+++. + .
T Consensus 277 l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~--~ 348 (466)
T 1o6v_A 277 ISNISP--LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV-S--S 348 (466)
T ss_dssp CCCCGG--GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-G--G
T ss_pred cCcccc--ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc-h--h
Confidence 987655 8899999999999999999876 7889999999999999998776 78899999999999999864 3 4
Q ss_pred hccCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccC
Q 036342 326 GEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCG 368 (596)
Q Consensus 326 ~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~ 368 (596)
+..+++|+.|++++|++++..| ...+++++.+++++|++.+.
T Consensus 349 l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 349 LANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp GTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEECC
T ss_pred hccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCcccCC
Confidence 6689999999999999998877 66788999999999998763
No 27
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-38 Score=348.50 Aligned_cols=338 Identities=20% Similarity=0.198 Sum_probs=293.2
Q ss_pred CCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCE
Q 036342 8 NLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSK 87 (596)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 87 (596)
.+++++.|++++|.+..+.+..|..+++|++|+|++|.+++ +++..+..+++|++|+|++|.+++..|..|.++++|++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEE-IDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCE-ECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCC-CChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 46889999999999988777788999999999999999985 44444556999999999999999988889999999999
Q ss_pred EEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEE
Q 036342 88 LSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEF 167 (596)
Q Consensus 88 L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L 167 (596)
|+|++|.|+++++..|.++++|++|+|++|.++++.+. .|.++++|+.|++++|.+++. .+..+ ++|+.|
T Consensus 128 L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~----~~~~l-~~L~~L 197 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDD-----TFQATTSLQNLQLSSNRLTHV----DLSLI-PSLFHA 197 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTT-----TTTTCTTCCEEECTTSCCSBC----CGGGC-TTCSEE
T ss_pred EEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChh-----hhhcCCcCcEEECcCCCCCCc----Chhhh-hhhhhh
Confidence 99999999988888899999999999999999987654 589999999999999999876 24445 689999
Q ss_pred EccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 168 YMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 168 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
++++|.+++. ...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.++
T Consensus 198 ~l~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~ 267 (597)
T 3oja_B 198 NVSYNLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE 267 (597)
T ss_dssp ECCSSCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred hcccCccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccC
Confidence 9999999863 44578999999999998655433 3689999999999996 467899999999999999999
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhc
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGE 327 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~ 327 (596)
+..|..|..+++|+.|+|++|.++++|..+..+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+++. | +.
T Consensus 268 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~-~---~~ 342 (597)
T 3oja_B 268 KIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTL-K---LS 342 (597)
T ss_dssp EEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCC-C---CC
T ss_pred CCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCc-C---hh
Confidence 999999999999999999999999999988889999999999999995 567788999999999999999854 4 34
Q ss_pred cCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCCC
Q 036342 328 KLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 328 ~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~~ 372 (596)
.+++|+.|++++|+++|..... .+..+....+.+++..|+.+..
T Consensus 343 ~~~~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~C~~~~~ 386 (597)
T 3oja_B 343 THHTLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKIDYQ 386 (597)
T ss_dssp TTCCCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCCCCCTTCE
T ss_pred hcCCCCEEEeeCCCCCChhHHH-HHHHHhhhccccccccCCcchh
Confidence 6889999999999999864322 3455556667788888887543
No 28
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.7e-39 Score=351.14 Aligned_cols=340 Identities=22% Similarity=0.259 Sum_probs=247.3
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccc-cCccccC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGT-IPRFIFN 81 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~ 81 (596)
|.+|+.+++|++|+|++|++++..|.+|..+++|++|||++|++++.++. .+..+++|++|+|++|.+++. .|..+.+
T Consensus 43 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~ 121 (549)
T 2z81_A 43 HGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSS-WFGPLSSLKYLNLMGNPYQTLGVTSLFPN 121 (549)
T ss_dssp SSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHH-HHTTCTTCCEEECTTCCCSSSCSSCSCTT
T ss_pred hhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHH-HhccCCCCcEEECCCCcccccchhhhhhc
Confidence 67789999999999999999988888999999999999999999854443 334589999999999999863 5678889
Q ss_pred CCCCCEEEccCCc-ccccCCccccCCCCCCEEecCCCcCcCCCCCc-ccc-----------------c-cCCCCCCCCEE
Q 036342 82 ASKLSKLSLGMNS-FSGFIPSTFGNLRNLEQLGLDENYLTSSTPEL-SFL-----------------S-SLSNCKSLTLI 141 (596)
Q Consensus 82 l~~L~~L~L~~N~-i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-----------------~-~~~~l~~L~~L 141 (596)
+++|++|++++|. +..+.+..|.++++|++|++++|.+++..+.. ... . .+..+++|++|
T Consensus 122 l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 201 (549)
T 2z81_A 122 LTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYL 201 (549)
T ss_dssp CTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEE
T ss_pred cCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEE
Confidence 9999999999998 55555578899999999999999888743321 000 0 01347889999
Q ss_pred ECcCCCCCccC--Cchh-------------------------------------------------------------h-
Q 036342 142 DLSNNPLDGIL--PKTS-------------------------------------------------------------I- 157 (596)
Q Consensus 142 ~ls~N~l~~~~--~~~~-------------------------------------------------------------~- 157 (596)
++++|++++.. +... +
T Consensus 202 ~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~ 281 (549)
T 2z81_A 202 ELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELG 281 (549)
T ss_dssp EEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCT
T ss_pred EccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhc
Confidence 99999988731 0000 0
Q ss_pred ------------------------hcccccccEEEccccccccccChhc-cCCCCCCEEEccCCcccCCCC---ccccCC
Q 036342 158 ------------------------SNLSRSLEEFYMYNCNISGGIPEEI-SNLTNLVEIDLGGNKLNGSIP---ITLGKL 209 (596)
Q Consensus 158 ------------------------~~l~~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l 209 (596)
.....+|+.|++++|.++. +|..+ ..+++|++|++++|.+.+..| ..+..+
T Consensus 282 ~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 360 (549)
T 2z81_A 282 KVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAW 360 (549)
T ss_dssp TCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSS
T ss_pred ccccccccccccchhhhcccchhhhhhcccceEEEeccCcccc-CCHHHHhcCccccEEEccCCccccccccchhhhhcc
Confidence 0001245566666666653 34443 467777777777777776543 235667
Q ss_pred CCCCeEEccCCcccccCc--cchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCccc----------
Q 036342 210 RKLQRLNLEDNILEGSIP--DDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTF---------- 277 (596)
Q Consensus 210 ~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~---------- 277 (596)
++|++|++++|.+++..+ ..+..+++|++|++++|+++ .+|..+..+++|++|+|++|.++.+|..+
T Consensus 361 ~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls 439 (549)
T 2z81_A 361 PSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVS 439 (549)
T ss_dssp TTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECC
T ss_pred ccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECC
Confidence 777777777777764322 34666777777777777776 45666666677777777777766554332
Q ss_pred --------ccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC
Q 036342 278 --------WNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 278 --------~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
..+++|++|++++|+++.. |. ...++.|+.||+++|++++..|. .+..+++|+.|++++|++.|.+|.
T Consensus 440 ~N~l~~~~~~l~~L~~L~Ls~N~l~~i-p~-~~~l~~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 440 NNNLDSFSLFLPRLQELYISRNKLKTL-PD-ASLFPVLLVMKISRNQLKSVPDG-IFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SSCCSCCCCCCTTCCEEECCSSCCSSC-CC-GGGCTTCCEEECCSSCCCCCCTT-GGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCChhhhcccCChhcEEECCCCccCcC-CC-cccCccCCEEecCCCccCCcCHH-HHhcCcccCEEEecCCCccCCCcc
Confidence 2678999999999999854 43 46789999999999999976555 677899999999999999988773
No 29
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9e-38 Score=342.43 Aligned_cols=333 Identities=18% Similarity=0.213 Sum_probs=269.7
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccc-cCccccC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGT-IPRFIFN 81 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~ 81 (596)
|.+|.++++|++|+|++|+|+++.|.+|..+++|++|||++|+++ .+|.. .+++|++|+|++|++++. .|..|.+
T Consensus 69 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~ 144 (562)
T 3a79_B 69 MPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGN 144 (562)
T ss_dssp GGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGG
T ss_pred hhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc---ccccCCEEECCCCCccccCchHhhcc
Confidence 368999999999999999999999999999999999999999998 55554 489999999999999963 4689999
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCC--CEEecCCCcC--cCCCCCc-cccc--------------------cCCC--
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNL--EQLGLDENYL--TSSTPEL-SFLS--------------------SLSN-- 134 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~~L--~~L~l~~N~l--~~~~~~~-~~~~--------------------~~~~-- 134 (596)
+++|++|+|++|+|++. .|.++++| ++|++++|.+ ++..+.. ..+. .+..
T Consensus 145 l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~ 221 (562)
T 3a79_B 145 LTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALG 221 (562)
T ss_dssp CTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEE
T ss_pred cCcccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccc
Confidence 99999999999999864 45555666 9999999988 5443321 0000 0001
Q ss_pred -----------------------------------------------------CCCCCEEECcCCCCCccCCchhh----
Q 036342 135 -----------------------------------------------------CKSLTLIDLSNNPLDGILPKTSI---- 157 (596)
Q Consensus 135 -----------------------------------------------------l~~L~~L~ls~N~l~~~~~~~~~---- 157 (596)
.++|++|++++|.+++.+|...+
T Consensus 222 ~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~ 301 (562)
T 3a79_B 222 HLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSE 301 (562)
T ss_dssp EEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCS
T ss_pred eEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhccc
Confidence 12677788888888876665221
Q ss_pred hcc-------------------------cccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCC
Q 036342 158 SNL-------------------------SRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKL 212 (596)
Q Consensus 158 ~~l-------------------------~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 212 (596)
..+ ..+|++|++++|.+.... .+..+++|++|++++|.+++..|..+..+++|
T Consensus 302 ~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 379 (562)
T 3a79_B 302 TALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL 379 (562)
T ss_dssp CSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSC
T ss_pred ccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCC
Confidence 111 024888888888876432 12688999999999999999999999999999
Q ss_pred CeEEccCCccccc--CccchhcCCCCcEEEccCCcCcccch-hhhccCCCCcEEEeCCCcccC-CCcccccccccceEEc
Q 036342 213 QRLNLEDNILEGS--IPDDICRLAELYRLELGSNKLYGSIP-ACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNF 288 (596)
Q Consensus 213 ~~L~L~~N~l~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~l 288 (596)
++|++++|.+++. +|..+..+++|+.|++++|++++.+| ..+..+++|+.|+|++|++++ +|..+. ++|++|++
T Consensus 380 ~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L 457 (562)
T 3a79_B 380 QTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDL 457 (562)
T ss_dssp CEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEEC
T ss_pred CEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEEC
Confidence 9999999999963 34678899999999999999998444 568899999999999999976 554443 79999999
Q ss_pred ccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC
Q 036342 289 SSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 289 s~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
++|+++. +|..+..++.|+.||+++|+++ .+|...+..+++|+.|++++|++.|.++.
T Consensus 458 ~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 458 HNNRIMS-IPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp CSSCCCC-CCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCcCcc-cChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 9999995 5556669999999999999999 67876678899999999999999987664
No 30
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=5.2e-37 Score=341.10 Aligned_cols=367 Identities=22% Similarity=0.225 Sum_probs=285.7
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNA 82 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (596)
|.+|.++++|++|||++|+|+++.|.+|.++++|++|+|++|+|+ .++...|..+++|++|+|++|++++..+..|.++
T Consensus 69 ~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L 147 (635)
T 4g8a_A 69 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ-SLALGAFSGLSSLQKLVAVETNLASLENFPIGHL 147 (635)
T ss_dssp TTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC-EECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTC
T ss_pred HHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCC-CCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcC
Confidence 357999999999999999999988999999999999999999998 4666566679999999999999998878889999
Q ss_pred CCCCEEEccCCccccc-CCccccCCCCCCEEecCCCcCcCCCCCc-c---------------------c-----------
Q 036342 83 SKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENYLTSSTPEL-S---------------------F----------- 128 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~---------------------~----------- 128 (596)
++|++|+|++|+|++. .|..+.++++|++|++++|+++++.+.. . +
T Consensus 148 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~ 227 (635)
T 4g8a_A 148 KTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLH 227 (635)
T ss_dssp TTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEE
T ss_pred cccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccchhhh
Confidence 9999999999999875 5788899999999999999886542210 0 0
Q ss_pred --------------------------------------------------------------------------------
Q 036342 129 -------------------------------------------------------------------------------- 128 (596)
Q Consensus 129 -------------------------------------------------------------------------------- 128 (596)
T Consensus 228 ~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 307 (635)
T 4g8a_A 228 KLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTN 307 (635)
T ss_dssp EEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTT
T ss_pred hhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcc
Confidence
Q ss_pred -------------cccCCCCCCCCEEECcCCCCCccCCch------------------hhhcccccccEEEccccccccc
Q 036342 129 -------------LSSLSNCKSLTLIDLSNNPLDGILPKT------------------SISNLSRSLEEFYMYNCNISGG 177 (596)
Q Consensus 129 -------------~~~~~~l~~L~~L~ls~N~l~~~~~~~------------------~~~~l~~~L~~L~l~~n~l~~~ 177 (596)
...+....+|+.|++++|.+.+..+.. ....+ ++|+.|++++|.+...
T Consensus 308 l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l-~~L~~L~ls~n~l~~~ 386 (635)
T 4g8a_A 308 VSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDL-PSLEFLDLSRNGLSFK 386 (635)
T ss_dssp CSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBC-TTCCEEECCSSCCBEE
T ss_pred cccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccc-cccccchhhccccccc
Confidence 000112234455555555544321110 01122 4677777777766421
Q ss_pred -------------------------cChhccCCCCCCEEEccCCcccCCC-CccccCCCCCCeEEccCCcccccCccchh
Q 036342 178 -------------------------IPEEISNLTNLVEIDLGGNKLNGSI-PITLGKLRKLQRLNLEDNILEGSIPDDIC 231 (596)
Q Consensus 178 -------------------------~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 231 (596)
.+..+..+++|+.++++.|...... +..|..+++++.++++.|.+++..+..+.
T Consensus 387 ~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~ 466 (635)
T 4g8a_A 387 GCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFN 466 (635)
T ss_dssp EECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTT
T ss_pred cccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccccccccccccccc
Confidence 2345666778888888877766554 45688999999999999999988999999
Q ss_pred cCCCCcEEEccCCcC-cccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCchhhhhccccccce
Q 036342 232 RLAELYRLELGSNKL-YGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIG 309 (596)
Q Consensus 232 ~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~ 309 (596)
.+++|+.|++++|++ .+..|..|..+++|+.|+|++|+|+++ |..|..+++|++|+|++|+|++..+..|..+++|++
T Consensus 467 ~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~ 546 (635)
T 4g8a_A 467 GLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQV 546 (635)
T ss_dssp TCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCE
T ss_pred cchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCE
Confidence 999999999999985 456788999999999999999999996 567899999999999999999999999999999999
Q ss_pred EecCCCcCcccCChhhhccC-CCCCeEECCCCcccccCCCCCC---CCCCCcccccccccccCCCCC
Q 036342 310 IDFSMNNFSGVIPREIGEKL-SYLEDLNLSFNKLKGEIPRGGS---FGNFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 310 L~ls~N~~~~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p~~~~---~~~l~~l~~~~N~~~c~~~~~ 372 (596)
||+++|++++..|. .+..+ ++|+.|+|++|+++|.+..... +..-...........|..|+.
T Consensus 547 L~Ls~N~l~~~~~~-~l~~l~~~L~~L~L~~Np~~C~C~~~~~~~wl~~~~~~~~~~~~~~C~~P~~ 612 (635)
T 4g8a_A 547 LDYSLNHIMTSKKQ-ELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSD 612 (635)
T ss_dssp EECTTSCCCBCCSS-CTTCCCTTCCEEECTTCCBCCSGGGHHHHHHHHHTTTTBSCGGGCBBCSSTT
T ss_pred EECCCCcCCCCCHH-HHHhhhCcCCEEEeeCCCCcccCCcHHHHHHHHhCCCccCCCCCceeCCchH
Confidence 99999999987776 55566 6899999999999987653211 111111112334567887764
No 31
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-37 Score=352.39 Aligned_cols=350 Identities=22% Similarity=0.232 Sum_probs=304.9
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+||. ..++|++|||++|+|+++.|..|..+++|++|||++|...+.+++..+..+++|++|+|++|.+++..|.+|.
T Consensus 18 ~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~ 94 (844)
T 3j0a_A 18 QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQ 94 (844)
T ss_dssp CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSC
T ss_pred CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHcc
Confidence 4676 4689999999999999999999999999999999999777778776777899999999999999999999999
Q ss_pred CCCCCCEEEccCCcccccCCcc--ccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhh
Q 036342 81 NASKLSKLSLGMNSFSGFIPST--FGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSIS 158 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~ 158 (596)
++++|++|+|++|.+++..+.. |.++++|++|+|++|.+++..+. ..|+++++|++|+|++|.+++..+. .+.
T Consensus 95 ~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~----~~~~~L~~L~~L~Ls~N~i~~~~~~-~l~ 169 (844)
T 3j0a_A 95 GLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH----PSFGKLNSLKSIDFSSNQIFLVCEH-ELE 169 (844)
T ss_dssp SCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC----GGGGTCSSCCEEEEESSCCCCCCSG-GGH
T ss_pred CCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccc----hhHhhCCCCCEEECCCCcCCeeCHH-Hcc
Confidence 9999999999999999866655 99999999999999999886432 3589999999999999999988766 555
Q ss_pred ccc-ccccEEEccccccccccChhccCCCC------CCEEEccCCcccCCCCccccC-----------------------
Q 036342 159 NLS-RSLEEFYMYNCNISGGIPEEISNLTN------LVEIDLGGNKLNGSIPITLGK----------------------- 208 (596)
Q Consensus 159 ~l~-~~L~~L~l~~n~l~~~~~~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~----------------------- 208 (596)
.+. ++|+.|++++|.+++..|..+..+++ |+.|++++|.+++..+..+..
T Consensus 170 ~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~ 249 (844)
T 3j0a_A 170 PLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGF 249 (844)
T ss_dssp HHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSC
T ss_pred cccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccc
Confidence 442 58999999999999988887777665 999999999887666544432
Q ss_pred ---------------CCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC
Q 036342 209 ---------------LRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI 273 (596)
Q Consensus 209 ---------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i 273 (596)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.++.+
T Consensus 250 ~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 329 (844)
T 3j0a_A 250 HNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL 329 (844)
T ss_dssp SSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC
T ss_pred cccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc
Confidence 26899999999999988888999999999999999999988899999999999999999999986
Q ss_pred -CcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCCCC
Q 036342 274 -PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSF 352 (596)
Q Consensus 274 -p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 352 (596)
|..+..+++|++|++++|.+++..+..|..+++|+.|++++|.+++ ++ .+++|+.|++++|+++. +|.. .
T Consensus 330 ~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~-----~~~~L~~L~l~~N~l~~-l~~~--~ 400 (844)
T 3j0a_A 330 YSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH-----FIPSIPDIFLSGNKLVT-LPKI--N 400 (844)
T ss_dssp CSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS-----SCCSCSEEEEESCCCCC-CCCC--C
T ss_pred CHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc-----CCCCcchhccCCCCccc-cccc--c
Confidence 6688899999999999999999888899999999999999999984 33 27889999999999984 4443 4
Q ss_pred CCCCccccccccccc
Q 036342 353 GNFSAESFEGNELLC 367 (596)
Q Consensus 353 ~~l~~l~~~~N~~~c 367 (596)
.+++.+++++|.+..
T Consensus 401 ~~l~~L~ls~N~l~~ 415 (844)
T 3j0a_A 401 LTANLIHLSENRLEN 415 (844)
T ss_dssp TTCCEEECCSCCCCS
T ss_pred cccceeecccCcccc
Confidence 567888999998765
No 32
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3e-36 Score=309.92 Aligned_cols=307 Identities=24% Similarity=0.384 Sum_probs=242.9
Q ss_pred cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCC
Q 036342 6 IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKL 85 (596)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (596)
+..+++|++|++++|+++.. + .+..+++|++|++++|++++ ++. +..+++|++|++++|.++. + +.+.++++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~--~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP--LSNLVKLTNLYIGTNKITD-I-SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC
T ss_pred chhcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh--hhcCCcCCEEEccCCcccC-c-hHHcCCCcC
Confidence 34678889999999988754 3 37888899999999998874 444 4458899999999998884 3 468888999
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccccccc
Q 036342 86 SKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165 (596)
Q Consensus 86 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~ 165 (596)
++|++++|.+++..+ +..+++|++|++++|...... ..+..+++|++|++++|.+.+..+ +..+ ++|+
T Consensus 113 ~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~------~~~~~l~~L~~L~l~~~~~~~~~~---~~~l-~~L~ 180 (347)
T 4fmz_A 113 RELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDL------SPLSNMTGLNYLTVTESKVKDVTP---IANL-TDLY 180 (347)
T ss_dssp SEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCC------GGGTTCTTCCEEECCSSCCCCCGG---GGGC-TTCS
T ss_pred CEEECcCCcccCchh--hccCCceeEEECCCCCCcccc------cchhhCCCCcEEEecCCCcCCchh---hccC-CCCC
Confidence 999999999886544 888899999999998654422 237888899999999998876532 5555 6789
Q ss_pred EEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCc
Q 036342 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNK 245 (596)
Q Consensus 166 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 245 (596)
+|++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++. +. +..+++|+.|++++|.
T Consensus 181 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 181 SLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp EEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSC
T ss_pred EEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCc
Confidence 99999998886544 7888889999999998886554 77888899999999988843 43 7888889999999998
Q ss_pred CcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhh
Q 036342 246 LYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREI 325 (596)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~ 325 (596)
+++. ..+..+++|+.|++++|.+++++ .+..+++|+.|++++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 255 l~~~--~~~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--- 328 (347)
T 4fmz_A 255 ISDI--NAVKDLTKLKMLNVGSNQISDIS-VLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--- 328 (347)
T ss_dssp CCCC--GGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG---
T ss_pred cCCC--hhHhcCCCcCEEEccCCccCCCh-hhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC---
Confidence 8754 45788888999999999888874 47778888999999998888888888888888889999888886544
Q ss_pred hccCCCCCeEECCCCccc
Q 036342 326 GEKLSYLEDLNLSFNKLK 343 (596)
Q Consensus 326 ~~~l~~L~~L~l~~N~l~ 343 (596)
+..+++|++|++++|+++
T Consensus 329 ~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 329 LASLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGCTTCSEESSSCC---
T ss_pred hhhhhccceeehhhhccc
Confidence 456888888888888875
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.3e-36 Score=321.39 Aligned_cols=326 Identities=26% Similarity=0.363 Sum_probs=283.1
Q ss_pred CCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEE
Q 036342 9 LQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKL 88 (596)
Q Consensus 9 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 88 (596)
+++++.|++++|.++. +| .+..+++|++|||++|.+++. ++ +..+++|++|++++|.+++..+ +.++++|++|
T Consensus 45 l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L 117 (466)
T 1o6v_A 45 LDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-TP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGL 117 (466)
T ss_dssp HHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred hccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-hh--hhccccCCEEECCCCccccChh--hcCCCCCCEE
Confidence 5789999999999975 44 478899999999999999854 44 4559999999999999996554 9999999999
Q ss_pred EccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEE
Q 036342 89 SLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFY 168 (596)
Q Consensus 89 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~ 168 (596)
++++|.+++..+ |.++++|++|++++|.++.++ .+..+++|+.|+++ |.+.+.. .+..+ ++|++|+
T Consensus 118 ~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-------~~~~l~~L~~L~l~-~~~~~~~---~~~~l-~~L~~L~ 183 (466)
T 1o6v_A 118 TLFNNQITDIDP--LKNLTNLNRLELSSNTISDIS-------ALSGLTSLQQLSFG-NQVTDLK---PLANL-TTLERLD 183 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCCG-------GGTTCTTCSEEEEE-ESCCCCG---GGTTC-TTCCEEE
T ss_pred ECCCCCCCCChH--HcCCCCCCEEECCCCccCCCh-------hhccCCcccEeecC-CcccCch---hhccC-CCCCEEE
Confidence 999999998754 899999999999999998743 37899999999997 5555442 36666 7899999
Q ss_pred ccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcc
Q 036342 169 MYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG 248 (596)
Q Consensus 169 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 248 (596)
+++|.+++. ..+..+++|++|++++|.+.+..| +..+++|++|++++|.+++ + +.+..+++|+.|++++|++.+
T Consensus 184 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~ 257 (466)
T 1o6v_A 184 ISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISN 257 (466)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCC
T ss_pred CcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCcccc
Confidence 999999875 458999999999999999998766 7789999999999999985 3 468899999999999999987
Q ss_pred cchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhcc
Q 036342 249 SIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEK 328 (596)
Q Consensus 249 ~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~ 328 (596)
..+ +..+++|+.|++++|.++.++. +..+++|+.|++++|++++..+ +..+++|+.|++++|++++..| +..
T Consensus 258 ~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~---~~~ 329 (466)
T 1o6v_A 258 LAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP---VSS 329 (466)
T ss_dssp CGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG---GGG
T ss_pred chh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh---hcc
Confidence 665 8899999999999999999886 8889999999999999998765 7899999999999999997655 468
Q ss_pred CCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCC
Q 036342 329 LSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSP 370 (596)
Q Consensus 329 l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~ 370 (596)
+++|+.|++++|++++. +....+++++.+++++|++....|
T Consensus 330 l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 330 LTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred CccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch
Confidence 99999999999999875 455678899999999999865444
No 34
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.6e-36 Score=317.21 Aligned_cols=294 Identities=22% Similarity=0.228 Sum_probs=260.2
Q ss_pred CCcc-cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 2 IPLE-IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 2 ip~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+|.. +..+++|++|+|++|+++++.+.+|..+++|++|+|++|++++ +++..+..+++|++|+|++|+++...+..|.
T Consensus 60 l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 138 (390)
T 3o6n_A 60 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFH 138 (390)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCc-CCHHHhcCCCCCCEEECCCCccCcCCHHHhc
Confidence 4555 6889999999999999998888899999999999999999985 4444445699999999999999965555678
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|.++++.+..|.++++|++|++++|.++... +..+++|+.|++++|.+++.. .
T Consensus 139 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------~~~l~~L~~L~l~~n~l~~~~-------~ 203 (390)
T 3o6n_A 139 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------LSLIPSLFHANVSYNLLSTLA-------I 203 (390)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--------GGGCTTCSEEECCSSCCSEEE-------C
T ss_pred CCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc--------cccccccceeecccccccccC-------C
Confidence 9999999999999999999999999999999999999998752 566789999999999998642 2
Q ss_pred cccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEE
Q 036342 161 SRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240 (596)
Q Consensus 161 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (596)
+.+|++|++++|.++..... ..++|+.|++++|.+++. ..+..+++|++|++++|.+++..|..+..+++|+.|+
T Consensus 204 ~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 204 PIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp CSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 26799999999999976433 247899999999999864 5789999999999999999988899999999999999
Q ss_pred ccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCccc
Q 036342 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 241 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~ 320 (596)
|++|++++ +|..+..+++|+.|+|++|+++.+|..+..+++|++|++++|+++... +..++.|+.|++++|.++..
T Consensus 279 L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 279 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCSSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcCcc-cCcccCCCCCCCEEECCCCcceecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCccch
Confidence 99999985 566778899999999999999999999999999999999999998763 67788999999999999864
No 35
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.2e-36 Score=317.70 Aligned_cols=316 Identities=18% Similarity=0.146 Sum_probs=257.8
Q ss_pred CcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCC
Q 036342 3 PLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNA 82 (596)
Q Consensus 3 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 82 (596)
|..++.+++|++|++++|+|++. | .+..+++|++|+|++|++++ ++ +..+++|++|+|++|++++. + +.++
T Consensus 35 ~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 35 TISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD---LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp EEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC---CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred ccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec---cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 34577899999999999999975 5 78999999999999999985 43 44589999999999999964 4 8899
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccc
Q 036342 83 SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSR 162 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~ 162 (596)
++|++|++++|+++++ + +..+++|++|++++|+++++ .++.+++|++|++++|...+.+ .+..+ +
T Consensus 106 ~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l--------~l~~l~~L~~L~l~~n~~~~~~---~~~~l-~ 170 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI--------DVSHNTQLTELDCHLNKKITKL---DVTPQ-T 170 (457)
T ss_dssp TTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC--------CCTTCTTCCEEECTTCSCCCCC---CCTTC-T
T ss_pred CcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee--------ccccCCcCCEEECCCCCccccc---ccccC-C
Confidence 9999999999999985 3 89999999999999999885 2688999999999999665554 35555 7
Q ss_pred cccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
+|++|++++|++++. | +..+++|+.|++++|.+++. .+..+++|++|++++|++++ +| +..+++|+.|+++
T Consensus 171 ~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~ 241 (457)
T 3bz5_A 171 QLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCS 241 (457)
T ss_dssp TCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECC
T ss_pred cCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEee
Confidence 899999999999984 4 88999999999999999975 48899999999999999996 56 8889999999999
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcccCCCc---------ccccccccceEEcccCCCCCchhh--------hhcccc
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSIPL---------TFWNLKDILQLNFSSNFLTGPLLL--------EIGNLK 305 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~---------~~~~l~~L~~L~ls~N~l~~~~~~--------~~~~l~ 305 (596)
+|++++..+. .+++|+.|++++|+++.+.. .+..+++|+.|++++|...+.+|. .+..++
T Consensus 242 ~N~l~~~~~~---~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~ 318 (457)
T 3bz5_A 242 VNPLTELDVS---TLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNP 318 (457)
T ss_dssp SSCCSCCCCT---TCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCT
T ss_pred CCcCCCcCHH---HCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcc
Confidence 9999976544 45555555555555544321 145678999999999988776654 345667
Q ss_pred ccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCCCCCCCCccccccccc
Q 036342 306 VLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNEL 365 (596)
Q Consensus 306 ~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~ 365 (596)
.|+.|++++|++++ ++ +..+++|+.|++++|++++ ++.+..+.+.+|.+
T Consensus 319 ~L~~L~L~~N~l~~-l~---l~~l~~L~~L~l~~N~l~~-------l~~L~~L~l~~n~l 367 (457)
T 3bz5_A 319 KLVYLYLNNTELTE-LD---VSHNTKLKSLSCVNAHIQD-------FSSVGKIPALNNNF 367 (457)
T ss_dssp TCCEEECTTCCCSC-CC---CTTCTTCSEEECCSSCCCB-------CTTGGGSSGGGTSE
T ss_pred cCCEEECCCCcccc-cc---cccCCcCcEEECCCCCCCC-------ccccccccccCCcE
Confidence 88999999999997 44 5678999999999999986 23444455555544
No 36
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.5e-35 Score=301.98 Aligned_cols=307 Identities=25% Similarity=0.364 Sum_probs=265.8
Q ss_pred hhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCC
Q 036342 29 AIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRN 108 (596)
Q Consensus 29 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 108 (596)
.+..+++|++|++++|.++ .++.+. .+++|++|++++|+++.. +. +.++++|++|++++|.++.+ +.|.++++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~-~~~~~~--~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~~ 111 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVA-SIQGIE--YLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLTN 111 (347)
T ss_dssp CHHHHTTCSEEECCSSCCC-CCTTGG--GCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTT
T ss_pred cchhcccccEEEEeCCccc-cchhhh--hcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCCc
Confidence 3456889999999999997 566544 489999999999999954 44 99999999999999999874 46999999
Q ss_pred CCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCC
Q 036342 109 LEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNL 188 (596)
Q Consensus 109 L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L 188 (596)
|++|++++|.++..+ .+..+++|+.|++++|......+ .+..+ ++|++|++++|.+++..+ +..+++|
T Consensus 112 L~~L~l~~n~i~~~~-------~~~~l~~L~~L~l~~n~~~~~~~--~~~~l-~~L~~L~l~~~~~~~~~~--~~~l~~L 179 (347)
T 4fmz_A 112 LRELYLNEDNISDIS-------PLANLTKMYSLNLGANHNLSDLS--PLSNM-TGLNYLTVTESKVKDVTP--IANLTDL 179 (347)
T ss_dssp CSEEECTTSCCCCCG-------GGTTCTTCCEEECTTCTTCCCCG--GGTTC-TTCCEEECCSSCCCCCGG--GGGCTTC
T ss_pred CCEEECcCCcccCch-------hhccCCceeEEECCCCCCccccc--chhhC-CCCcEEEecCCCcCCchh--hccCCCC
Confidence 999999999998753 27899999999999997655443 36666 789999999999987655 8899999
Q ss_pred CEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCC
Q 036342 189 VEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSN 268 (596)
Q Consensus 189 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 268 (596)
++|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|
T Consensus 180 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 253 (347)
T 4fmz_A 180 YSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTN 253 (347)
T ss_dssp SEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred CEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCC
Confidence 999999999986554 8899999999999999995443 8899999999999999986555 899999999999999
Q ss_pred cccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC
Q 036342 269 KLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 269 ~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
.++.++ .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+. .+..+++|+.|++++|++++..|
T Consensus 254 ~l~~~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~-~l~~l~~L~~L~L~~n~l~~~~~- 328 (347)
T 4fmz_A 254 QISDIN-AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDME-VIGGLTNLTTLFLSQNHITDIRP- 328 (347)
T ss_dssp CCCCCG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHH-HHHTCTTCSEEECCSSSCCCCGG-
T ss_pred ccCCCh-hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChh-HhhccccCCEEEccCCccccccC-
Confidence 999985 678899999999999999986 4688999999999999999976555 67789999999999999998777
Q ss_pred CCCCCCCCccccccccc
Q 036342 349 GGSFGNFSAESFEGNEL 365 (596)
Q Consensus 349 ~~~~~~l~~l~~~~N~~ 365 (596)
...+++++.+++++|++
T Consensus 329 ~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 329 LASLSKMDSADFANQVI 345 (347)
T ss_dssp GGGCTTCSEESSSCC--
T ss_pred hhhhhccceeehhhhcc
Confidence 56789999999999986
No 37
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.3e-36 Score=329.30 Aligned_cols=297 Identities=22% Similarity=0.225 Sum_probs=263.2
Q ss_pred CCcc-cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 2 IPLE-IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 2 ip~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+|+. |+.+++|++|+|++|+|+++.|..|..+++|++|+|++|.+++ +++..+..+++|++|+|++|.+++..+..|.
T Consensus 66 lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~ 144 (597)
T 3oja_B 66 LPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRY-LPPHVFQNVPLLTVLVLERNDLSSLPRGIFH 144 (597)
T ss_dssp ECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCC-CCHHHHcCCCCCCEEEeeCCCCCCCCHHHhc
Confidence 3444 6789999999999999999989999999999999999999986 4444445699999999999999976666789
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
++++|++|+|++|.|+++.|..|.++++|++|++++|.+++.+ +..+++|+.|++++|.+++.. .
T Consensus 145 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--------~~~l~~L~~L~l~~n~l~~l~-------~ 209 (597)
T 3oja_B 145 NTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--------LSLIPSLFHANVSYNLLSTLA-------I 209 (597)
T ss_dssp TCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--------GGGCTTCSEEECCSSCCSEEE-------C
T ss_pred cCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--------hhhhhhhhhhhcccCcccccc-------C
Confidence 9999999999999999999999999999999999999998753 456789999999999998642 2
Q ss_pred cccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEE
Q 036342 161 SRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240 (596)
Q Consensus 161 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (596)
+.+|+.|++++|.++...+..+ ++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..|..|..+++|+.|+
T Consensus 210 ~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 284 (597)
T 3oja_B 210 PIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 284 (597)
T ss_dssp CTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CchhheeeccCCcccccccccC---CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEE
Confidence 2679999999999987655433 689999999999997 46789999999999999999999999999999999999
Q ss_pred ccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCccc
Q 036342 241 LGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 241 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~ 320 (596)
|++|.+++ +|..+..+++|+.|+|++|.++.+|..+..+++|++|++++|.+++.. +..++.|+.|++++|.+++.
T Consensus 285 Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 285 ISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLHVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CTTSCCCE-EECSSSCCTTCCEEECCSSCCCCCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCC-CCcccccCCCCcEEECCCCCCCccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 99999986 577778899999999999999999999999999999999999998763 66788999999999999865
Q ss_pred CCh
Q 036342 321 IPR 323 (596)
Q Consensus 321 ~~~ 323 (596)
...
T Consensus 361 ~~~ 363 (597)
T 3oja_B 361 SLR 363 (597)
T ss_dssp HHH
T ss_pred hHH
Confidence 433
No 38
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.8e-35 Score=311.35 Aligned_cols=320 Identities=18% Similarity=0.200 Sum_probs=261.0
Q ss_pred CCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccC
Q 036342 2 IPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFN 81 (596)
Q Consensus 2 ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (596)
+| +++.+++|++|+|++|+|+++ | +..+++|++|+|++|++++ ++ +..+++|++|++++|++++ +| +..
T Consensus 57 ~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~---~~~l~~L~~L~L~~N~l~~-l~--~~~ 125 (457)
T 3bz5_A 57 MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD---VTPLTKLTYLNCDTNKLTK-LD--VSQ 125 (457)
T ss_dssp CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC---CTTCTTCCEEECCSSCCSC-CC--CTT
T ss_pred Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee---cCCCCcCCEEECCCCcCCe-ec--CCC
Confidence 45 689999999999999999975 3 8899999999999999986 33 4459999999999999996 44 899
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccc
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLS 161 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~ 161 (596)
+++|++|++++|+|+++ + +.++++|++|++++|...+.. .+..+++|+.|++++|+++++ | +..+
T Consensus 126 l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-------~~~~l~~L~~L~ls~n~l~~l-~---l~~l- 190 (457)
T 3bz5_A 126 NPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-------DVTPQTQLTTLDCSFNKITEL-D---VSQN- 190 (457)
T ss_dssp CTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC-------CCTTCTTCCEEECCSSCCCCC-C---CTTC-
T ss_pred CCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc-------ccccCCcCCEEECCCCcccee-c---cccC-
Confidence 99999999999999985 2 889999999999999543321 378899999999999999985 3 5566
Q ss_pred ccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCC-------
Q 036342 162 RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLA------- 234 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~------- 234 (596)
++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++++|.+++..+..+..+.
T Consensus 191 ~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 191 KLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQT 264 (457)
T ss_dssp TTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTC
T ss_pred CCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCC
Confidence 6899999999999986 48899999999999999998 45 88999999999999999976555555444
Q ss_pred CCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC-CCc--------ccccccccceEEcccCCCCCchhhhhcccc
Q 036342 235 ELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPL--------TFWNLKDILQLNFSSNFLTGPLLLEIGNLK 305 (596)
Q Consensus 235 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-ip~--------~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~ 305 (596)
+|+.|++++|.+.+.+| ++.+++|+.|+|++|...+ +|. .+..+++|++|++++|++++. .+..++
T Consensus 265 ~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l---~l~~l~ 339 (457)
T 3bz5_A 265 DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL---DVSHNT 339 (457)
T ss_dssp CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC---CCTTCT
T ss_pred CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc---ccccCC
Confidence 56677777777766666 5778999999999998654 443 355678999999999999985 388999
Q ss_pred ccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCC
Q 036342 306 VLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 306 ~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
.|+.||+++|++++ + +.|..|++++|.++|. +.+..+..+++++|.+....|+
T Consensus 340 ~L~~L~l~~N~l~~-l--------~~L~~L~l~~n~l~g~----~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 340 KLKSLSCVNAHIQD-F--------SSVGKIPALNNNFEAE----GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp TCSEEECCSSCCCB-C--------TTGGGSSGGGTSEEEE----EEEEECCCBCCBTTBEEEECCT
T ss_pred cCcEEECCCCCCCC-c--------cccccccccCCcEEec----ceeeecCccccccCcEEEEcCh
Confidence 99999999999985 2 3466667777777765 1234556667777776554443
No 39
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.8e-35 Score=312.92 Aligned_cols=318 Identities=28% Similarity=0.351 Sum_probs=205.5
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCC-------------CEEEccCCcCccccCccCccCCCCccEEEcc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTL-------------KFLGLQNNSLSGSLSSIANVRLPNLEKLYLW 67 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-------------~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~ 67 (596)
+||++|+++++|++|++++|++++..|..++.+.+| ++|++++|.+++ +|.. .++|++|+++
T Consensus 25 ~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~----~~~L~~L~l~ 99 (454)
T 1jl5_A 25 EMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL----PPHLESLVAS 99 (454)
T ss_dssp ---------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC----CTTCSEEECC
T ss_pred hCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC----cCCCCEEEcc
Confidence 477888888888888888888887888877776654 788888888774 3332 4678888888
Q ss_pred CCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCC
Q 036342 68 GNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNP 147 (596)
Q Consensus 68 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~ 147 (596)
+|.+++ +|.. +++|++|++++|+++++.. . .++|++|++++|++++++ .++++++|++|++++|+
T Consensus 100 ~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~~lp-------~~~~l~~L~~L~l~~N~ 164 (454)
T 1jl5_A 100 CNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLEKLP-------ELQNSSFLKIIDVDNNS 164 (454)
T ss_dssp SSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCSSCC-------CCTTCTTCCEEECCSSC
T ss_pred CCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCCCCc-------ccCCCCCCCEEECCCCc
Confidence 888885 5543 3678888888888775322 1 257888888888877643 27778888888888888
Q ss_pred CCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCc
Q 036342 148 LDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227 (596)
Q Consensus 148 l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 227 (596)
++++ |. ...+|++|++++|++++ +| .|.++++|++|++++|.+++ +|.. .++|++|++++|.++ .+|
T Consensus 165 l~~l-p~-----~~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 165 LKKL-PD-----LPPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSCC-CC-----CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-SCC
T ss_pred Cccc-CC-----CcccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCcCC-ccc
Confidence 8763 32 12468888888888876 34 57788888888888888875 3332 247788888888777 566
Q ss_pred cchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCc--hhhhh----
Q 036342 228 DDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGP--LLLEI---- 301 (596)
Q Consensus 228 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~--~~~~~---- 301 (596)
.+..+++|++|++++|++++ +|. .+++|+.|++++|.++++|.. +++|++|++++|++++. .|..+
T Consensus 232 -~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~ 303 (454)
T 1jl5_A 232 -ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGLSELPPNLYYLN 303 (454)
T ss_dssp -CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEESCCCTTCCEEE
T ss_pred -ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECCCCcccccCcc---cCcCCEEECcCCccCcccCcCCcCCEEE
Confidence 37777778888888887774 333 236777777777777776653 25666666666666652 11111
Q ss_pred ---------ccc-cccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCCCCCCCCCccccccccccc
Q 036342 302 ---------GNL-KVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLC 367 (596)
Q Consensus 302 ---------~~l-~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c 367 (596)
..+ +.|+.|++++|++++ +|. .+++|++|++++|++++ +|. .+++++.+++++|++.+
T Consensus 304 l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-lp~----~~~~L~~L~L~~N~l~~-lp~--~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 304 ASSNEIRSLCDLPPSLEELNVSNNKLIE-LPA----LPPRLERLIASFNHLAE-VPE--LPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp CCSSCCSEECCCCTTCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSS
T ss_pred CcCCcCCcccCCcCcCCEEECCCCcccc-ccc----cCCcCCEEECCCCcccc-ccc--hhhhccEEECCCCCCCc
Confidence 111 356666666666664 443 24566666666666663 333 35566666666666654
No 40
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.8e-34 Score=293.11 Aligned_cols=291 Identities=19% Similarity=0.181 Sum_probs=237.6
Q ss_pred CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEe
Q 036342 34 STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLG 113 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 113 (596)
.+++.++++++.++ .+|... .++|+.|+|++|++++..+..|.++++|++|+|++|+|+++.|+.|.++++|++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDL---PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSC---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCcc-ccCccC---CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 47888999999887 454422 36889999999999977777889999999999999999988889999999999999
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcccccccc--ccChhccCCCCCCEE
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISG--GIPEEISNLTNLVEI 191 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L 191 (596)
+++|.++.++.. +. ++|++|++++|.+++..+. .+..+ ++|++|++++|.++. ..+..|..+++|++|
T Consensus 107 Ls~n~l~~l~~~------~~--~~L~~L~l~~n~l~~~~~~-~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L 176 (330)
T 1xku_A 107 LSKNQLKELPEK------MP--KTLQELRVHENEITKVRKS-VFNGL-NQMIVVELGTNPLKSSGIENGAFQGMKKLSYI 176 (330)
T ss_dssp CCSSCCSBCCSS------CC--TTCCEEECCSSCCCBBCHH-HHTTC-TTCCEEECCSSCCCGGGBCTTGGGGCTTCCEE
T ss_pred CCCCcCCccChh------hc--ccccEEECCCCcccccCHh-HhcCC-ccccEEECCCCcCCccCcChhhccCCCCcCEE
Confidence 999998876543 22 6899999999999876443 66777 689999999999864 778889999999999
Q ss_pred EccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 192 DLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 192 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
++++|.++. +|..+. ++|++|++++|.+++..|..+..+++|+.|++++|.+++..+..+..+++|+.|+|++|.++
T Consensus 177 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 177 RIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 999999985 444432 78999999999999888888999999999999999999888888999999999999999999
Q ss_pred CCCcccccccccceEEcccCCCCCchhhhhccc------cccceEecCCCcCcc-cCChhhhccCCCCCeEECCCCc
Q 036342 272 SIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNL------KVLIGIDFSMNNFSG-VIPREIGEKLSYLEDLNLSFNK 341 (596)
Q Consensus 272 ~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l------~~L~~L~ls~N~~~~-~~~~~~~~~l~~L~~L~l~~N~ 341 (596)
.+|..+..+++|++|++++|++++..+..|... ..++.|++++|.+.. .++...+..+..++.++|++|+
T Consensus 254 ~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 254 KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 999999999999999999999998877777543 677888888888752 2444466678888888888874
No 41
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.3e-34 Score=295.76 Aligned_cols=290 Identities=23% Similarity=0.275 Sum_probs=237.7
Q ss_pred CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEe
Q 036342 34 STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLG 113 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 113 (596)
.+++.+++++|.++ .+|... .++|+.|+|++|.+++..|..|.++++|++|+|++|+|+++.|.+|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 36899999999987 455422 36899999999999987788899999999999999999988899999999999999
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccc--cccChhccCCCCCCEE
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNIS--GGIPEEISNLTNLVEI 191 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~--~~~~~~~~~l~~L~~L 191 (596)
+++|.++.++.. +. ++|++|++++|.+++..+. .+..+ ++|++|++++|.++ +..+..|..+ +|++|
T Consensus 109 L~~n~l~~l~~~------~~--~~L~~L~l~~n~i~~~~~~-~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L 177 (332)
T 2ft3_A 109 ISKNHLVEIPPN------LP--SSLVELRIHDNRIRKVPKG-VFSGL-RNMNCIEMGGNPLENSGFEPGAFDGL-KLNYL 177 (332)
T ss_dssp CCSSCCCSCCSS------CC--TTCCEEECCSSCCCCCCSG-GGSSC-SSCCEEECCSCCCBGGGSCTTSSCSC-CCSCC
T ss_pred CCCCcCCccCcc------cc--ccCCEEECCCCccCccCHh-HhCCC-ccCCEEECCCCccccCCCCcccccCC-ccCEE
Confidence 999999876554 22 7899999999999865443 57777 68999999999996 3777888888 89999
Q ss_pred EccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 192 DLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 192 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
++++|.+++ +|..+. ++|++|++++|.+++..+..+..+++|+.|++++|++++..+..|..+++|+.|+|++|+++
T Consensus 178 ~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 178 RISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 999999986 444443 78999999999999877788999999999999999999888888999999999999999999
Q ss_pred CCCcccccccccceEEcccCCCCCchhhhhccc------cccceEecCCCcCcc-cCChhhhccCCCCCeEECCCCc
Q 036342 272 SIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNL------KVLIGIDFSMNNFSG-VIPREIGEKLSYLEDLNLSFNK 341 (596)
Q Consensus 272 ~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l------~~L~~L~ls~N~~~~-~~~~~~~~~l~~L~~L~l~~N~ 341 (596)
.+|..+..+++|+.|++++|++++..+..|.+. ..|+.|++++|.+.. .++...+..++.|+.+++++|+
T Consensus 255 ~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 999989999999999999999998777777653 568888888888861 2344466778888888888874
No 42
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.3e-34 Score=294.04 Aligned_cols=288 Identities=24% Similarity=0.295 Sum_probs=245.9
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEE
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLS 89 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (596)
.+++.+++++|+++ .+|..+ .++|++|+|++|.+++ +++..+..+++|++|+|++|++++..|.+|.++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISE-LRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCE-ECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCc-cCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 37999999999997 566665 3689999999999985 4444455699999999999999988899999999999999
Q ss_pred ccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCc--cCCchhhhcccccccEE
Q 036342 90 LGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDG--ILPKTSISNLSRSLEEF 167 (596)
Q Consensus 90 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~~l~~~L~~L 167 (596)
|++|+++.+.+..+ ++|++|++++|.++.+++. .|.++++|+.|++++|.++. ..+. .+..+ +|++|
T Consensus 109 L~~n~l~~l~~~~~---~~L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~-~~~~l--~L~~L 177 (332)
T 2ft3_A 109 ISKNHLVEIPPNLP---SSLVELRIHDNRIRKVPKG-----VFSGLRNMNCIEMGGNPLENSGFEPG-AFDGL--KLNYL 177 (332)
T ss_dssp CCSSCCCSCCSSCC---TTCCEEECCSSCCCCCCSG-----GGSSCSSCCEEECCSCCCBGGGSCTT-SSCSC--CCSCC
T ss_pred CCCCcCCccCcccc---ccCCEEECCCCccCccCHh-----HhCCCccCCEEECCCCccccCCCCcc-cccCC--ccCEE
Confidence 99999996554443 8999999999999987654 48899999999999999964 3343 55554 79999
Q ss_pred EccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 168 YMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 168 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
++++|++++. |..+. ++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|+.|++++|+++
T Consensus 178 ~l~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 254 (332)
T 2ft3_A 178 RISEAKLTGI-PKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS 254 (332)
T ss_dssp BCCSSBCSSC-CSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC
T ss_pred ECcCCCCCcc-Ccccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe
Confidence 9999999974 54443 78999999999999998899999999999999999999887788999999999999999998
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCcc-ccc------ccccceEEcccCCCC--CchhhhhccccccceEecCCCc
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPLT-FWN------LKDILQLNFSSNFLT--GPLLLEIGNLKVLIGIDFSMNN 316 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~-~~~------l~~L~~L~ls~N~l~--~~~~~~~~~l~~L~~L~ls~N~ 316 (596)
.+|..+..+++|+.|++++|.++.+|.. +.. ..+|+.|++++|++. ...+..|..++.|+.+++++|.
T Consensus 255 -~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 255 -RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp -BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred -ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 6788899999999999999999998754 333 367899999999998 6778899999999999999885
No 43
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=6e-35 Score=295.54 Aligned_cols=256 Identities=30% Similarity=0.525 Sum_probs=166.6
Q ss_pred CCCCEEEccCCcccc--cCCccccCCCCCCEEecCC-CcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhc
Q 036342 83 SKLSKLSLGMNSFSG--FIPSTFGNLRNLEQLGLDE-NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISN 159 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~--~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~ 159 (596)
.+++.|+|++|.+++ .+|..|.++++|++|++++ |.+++..+ ..|.++++|++|++++|.++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p-----~~l~~l~~L~~L~Ls~n~l~---------- 114 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP-----PAIAKLTQLHYLYITHTNVS---------- 114 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCC-----GGGGGCTTCSEEEEEEECCE----------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCC-----hhHhcCCCCCEEECcCCeeC----------
Confidence 467788888888877 6777777777777777773 66654322 23555555555555555554
Q ss_pred ccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCC-CCcE
Q 036342 160 LSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLA-ELYR 238 (596)
Q Consensus 160 l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~ 238 (596)
+..|..|..+++|++|++++|.+++..|..|..+++|++|++++|.+++.+|..+..++ +|+.
T Consensus 115 ----------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~ 178 (313)
T 1ogq_A 115 ----------------GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178 (313)
T ss_dssp ----------------EECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCE
T ss_pred ----------------CcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcE
Confidence 44445555555555555555555555555555555555555555555555555555554 5555
Q ss_pred EEccCCcCcccchhhhccCCCCcEEEeCCCcccC-CCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcC
Q 036342 239 LELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNF 317 (596)
Q Consensus 239 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~ 317 (596)
|++++|++++..|..+..++ |+.|+|++|.+++ +|..+..+++|+.|++++|.+++..+. +..+++|++||+++|++
T Consensus 179 L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l 256 (313)
T 1ogq_A 179 MTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRI 256 (313)
T ss_dssp EECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCC
T ss_pred EECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcc
Confidence 55555555555555555554 5555555555554 344455556666666666666655444 56677788888888888
Q ss_pred cccCChhhhccCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCCC
Q 036342 318 SGVIPREIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPNL 372 (596)
Q Consensus 318 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~~ 372 (596)
++.+|. .+..+++|+.|++++|++++.+|....+++++.+++++|++.|+.|..
T Consensus 257 ~~~~p~-~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~ 310 (313)
T 1ogq_A 257 YGTLPQ-GLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP 310 (313)
T ss_dssp EECCCG-GGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS
T ss_pred cCcCCh-HHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC
Confidence 877777 456788888888888888888888877888999999999999987653
No 44
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.4e-33 Score=287.99 Aligned_cols=289 Identities=21% Similarity=0.282 Sum_probs=244.9
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEE
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLS 89 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (596)
.+++.++++++.++ .+|..+ .++|++|+|++|++++ ++...+..+++|++|+|++|++++..|..|.++++|++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~--~~~l~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDL--PPDTALLDLQNNKITE-IKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSC--CTTCCEEECCSSCCCC-BCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCcc-ccCccC--CCCCeEEECCCCcCCE-eChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 37899999999997 466655 3689999999999985 5444455699999999999999988899999999999999
Q ss_pred ccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCc--cCCchhhhcccccccEE
Q 036342 90 LGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDG--ILPKTSISNLSRSLEEF 167 (596)
Q Consensus 90 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~--~~~~~~~~~l~~~L~~L 167 (596)
|++|+|+.+....+ ++|++|++++|.++.+.+. .|.++++|+.|++++|.++. ..+. .+..+ ++|++|
T Consensus 107 Ls~n~l~~l~~~~~---~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~-~~~~l-~~L~~L 176 (330)
T 1xku_A 107 LSKNQLKELPEKMP---KTLQELRVHENEITKVRKS-----VFNGLNQMIVVELGTNPLKSSGIENG-AFQGM-KKLSYI 176 (330)
T ss_dssp CCSSCCSBCCSSCC---TTCCEEECCSSCCCBBCHH-----HHTTCTTCCEEECCSSCCCGGGBCTT-GGGGC-TTCCEE
T ss_pred CCCCcCCccChhhc---ccccEEECCCCcccccCHh-----HhcCCccccEEECCCCcCCccCcChh-hccCC-CCcCEE
Confidence 99999996544333 7899999999999886543 58899999999999999964 4343 67777 789999
Q ss_pred EccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 168 YMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 168 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
++++|.++.. |..+. ++|++|++++|.+++..|..|..+++|++|++++|.+++..+..+..+++|+.|++++|+++
T Consensus 177 ~l~~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 177 RIADTNITTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp ECCSSCCCSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ECCCCccccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc
Confidence 9999999864 44443 79999999999999988999999999999999999999888888999999999999999998
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCcccc-------cccccceEEcccCCCCC--chhhhhccccccceEecCCCc
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPLTFW-------NLKDILQLNFSSNFLTG--PLLLEIGNLKVLIGIDFSMNN 316 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~-------~l~~L~~L~ls~N~l~~--~~~~~~~~l~~L~~L~ls~N~ 316 (596)
.+|..+..+++|++|+|++|+++++|...+ ....++.|++++|++.. ..|..|..+..++.+++++|+
T Consensus 254 -~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 254 -KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp -SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred -cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 778889999999999999999999876432 24678999999999974 567889999999999999985
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.3e-33 Score=298.20 Aligned_cols=264 Identities=28% Similarity=0.326 Sum_probs=163.1
Q ss_pred CCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCC
Q 036342 59 PNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSL 138 (596)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L 138 (596)
++|++|++++|++++ +| +|.++++|++|++++|++++ +|.. ..+|++|++++|.+++++ .+.++++|
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~l~-------~~~~l~~L 197 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL---PPSLEFIAAGNNQLEELP-------ELQNLPFL 197 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCC-------CCTTCTTC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC---cccccEEECcCCcCCcCc-------cccCCCCC
Confidence 355555555555553 44 35555566666666665554 2222 235556666666555532 35677777
Q ss_pred CEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEcc
Q 036342 139 TLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLE 218 (596)
Q Consensus 139 ~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 218 (596)
+.|++++|.+++. |. .+++|++|++++|.++ .+| .|..+++|++|++++|++++ +|. .+++|++|+++
T Consensus 198 ~~L~l~~N~l~~l-~~-----~~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~---~~~~L~~L~l~ 265 (454)
T 1jl5_A 198 TAIYADNNSLKKL-PD-----LPLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPD---LPPSLEALNVR 265 (454)
T ss_dssp CEEECCSSCCSSC-CC-----CCTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCS---CCTTCCEEECC
T ss_pred CEEECCCCcCCcC-CC-----CcCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-ccc---cccccCEEECC
Confidence 7777777777653 22 2246777777777777 345 37777777777777777775 332 23677777777
Q ss_pred CCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchh
Q 036342 219 DNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLL 298 (596)
Q Consensus 219 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~ 298 (596)
+|.+++ +|.. .++|+.|++++|++++. |.. .++|++|++++|.+++++.. .++|++|++++|++++ +|
T Consensus 266 ~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~~~---~~~L~~L~Ls~N~l~~-lp 333 (454)
T 1jl5_A 266 DNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLCDL---PPSLEELNVSNNKLIE-LP 333 (454)
T ss_dssp SSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEECCC---CTTCCEEECCSSCCSC-CC
T ss_pred CCcccc-cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcccCC---cCcCCEEECCCCcccc-cc
Confidence 777774 4433 36777788888777652 211 15777888888887775531 2589999999999997 34
Q ss_pred hhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccc--cCCCC-CCC-------------CCCCcccccc
Q 036342 299 LEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG--EIPRG-GSF-------------GNFSAESFEG 362 (596)
Q Consensus 299 ~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~-~~~-------------~~l~~l~~~~ 362 (596)
.. +++|+.|++++|+++ .+|. .+++|++|++++|++++ .+|.. ..+ ++++.+++++
T Consensus 334 ~~---~~~L~~L~L~~N~l~-~lp~----~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~ 405 (454)
T 1jl5_A 334 AL---PPRLERLIASFNHLA-EVPE----LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVET 405 (454)
T ss_dssp CC---CTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC-------------------
T ss_pred cc---CCcCCEEECCCCccc-cccc----hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCC
Confidence 33 578999999999998 5676 47889999999999998 55654 233 7789999999
Q ss_pred ccccc
Q 036342 363 NELLC 367 (596)
Q Consensus 363 N~~~c 367 (596)
|++.+
T Consensus 406 N~l~~ 410 (454)
T 1jl5_A 406 NPLRE 410 (454)
T ss_dssp -----
T ss_pred CcCCc
Confidence 99875
No 46
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-34 Score=292.52 Aligned_cols=250 Identities=30% Similarity=0.428 Sum_probs=193.5
Q ss_pred CCccEEEccCCcccc--ccCccccCCCCCCEEEccC-CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCC
Q 036342 59 PNLEKLYLWGNNFSG--TIPRFIFNASKLSKLSLGM-NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNC 135 (596)
Q Consensus 59 ~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l 135 (596)
.+++.|+|++|.+++ .+|..+.++++|++|+|++ |.+.+.+|..|.++++|++|++++|.+++..+. .|.++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~-----~~~~l 124 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPD-----FLSQI 124 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCG-----GGGGC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCH-----HHhCC
Confidence 689999999999998 8999999999999999995 999999999999999999999999999864332 46666
Q ss_pred CCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCC-CCCe
Q 036342 136 KSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLR-KLQR 214 (596)
Q Consensus 136 ~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~ 214 (596)
++|++|++++|.+++. .|..|..+++|++|++++|.+++.+|..+..++ +|++
T Consensus 125 ~~L~~L~Ls~N~l~~~--------------------------~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~ 178 (313)
T 1ogq_A 125 KTLVTLDFSYNALSGT--------------------------LPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTS 178 (313)
T ss_dssp TTCCEEECCSSEEESC--------------------------CCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCE
T ss_pred CCCCEEeCCCCccCCc--------------------------CChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcE
Confidence 6666666666665544 444555566666666666666666666666665 6666
Q ss_pred EEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCC
Q 036342 215 LNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 215 L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~ 294 (596)
|++++|.+++.+|..+..+. |+.|++++|++++..|..|..+++|+.|+|++|.++..+..+..+++|++|++++|+++
T Consensus 179 L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~ 257 (313)
T 1ogq_A 179 MTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIY 257 (313)
T ss_dssp EECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCE
T ss_pred EECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCccc
Confidence 66666666666666666665 77777777777766777777777777777777777765555667778888888888888
Q ss_pred CchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcc
Q 036342 295 GPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342 (596)
Q Consensus 295 ~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l 342 (596)
+..|..+..++.|+.|++++|++++.+|.. ..+++|+.+++++|+.
T Consensus 258 ~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~--~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 258 GTLPQGLTQLKFLHSLNVSFNNLCGEIPQG--GNLQRFDVSAYANNKC 303 (313)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCCS--TTGGGSCGGGTCSSSE
T ss_pred CcCChHHhcCcCCCEEECcCCcccccCCCC--ccccccChHHhcCCCC
Confidence 778888888888888889999988888873 5788899999999984
No 47
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-34 Score=287.42 Aligned_cols=151 Identities=25% Similarity=0.436 Sum_probs=128.2
Q ss_pred HhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
...+++...+.||+|+||+||+|. +.|.+|+.++++++|||||+++|++.+ +..|+|||
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 345678888999999999999862 568899999999999999999999865 56899999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
||++|+|.++++.....++|.++..|+.|||+|++||| +++||||||||+|||+++++.+||+|||+|+........
T Consensus 112 y~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 112 WCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred cCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 99999999999887777999999999999999999999 889999999999999999999999999999876433323
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......+||+.||||
T Consensus 189 ~~~~~~~GT~~ymAP 203 (307)
T 3omv_A 189 QQVEQPTGSVLWMAP 203 (307)
T ss_dssp -----CCCCTTSCCH
T ss_pred eeecccccCCCccCH
Confidence 334557899999998
No 48
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4e-34 Score=284.72 Aligned_cols=148 Identities=30% Similarity=0.493 Sum_probs=133.5
Q ss_pred ccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++|+..+.||+|+||+||+|. +.+.+|++++++++|||||++++++++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 579999999999999999852 35788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
|||+||+|.+++...+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999999998764 6899999999999999999999 89999999999999999999999999999998754333
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.......+||+.||||
T Consensus 188 ~~~~~~~~GTp~YmAP 203 (311)
T 4aw0_A 188 QARANSFVGTAQYVSP 203 (311)
T ss_dssp CCCBCCCCSCGGGCCH
T ss_pred cccccCcccCcccCCH
Confidence 3334567999999998
No 49
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=4.7e-35 Score=312.91 Aligned_cols=352 Identities=18% Similarity=0.164 Sum_probs=151.1
Q ss_pred CCCEEECCCCCCccccchh-hhCCCCCCEEEccCCcCccc----cCccCccCCCCccEEEccCCccccccCcccc-CCC-
Q 036342 11 NLEELQLGQNKLIGTVPAA-IFNVSTLKFLGLQNNSLSGS----LSSIANVRLPNLEKLYLWGNNFSGTIPRFIF-NAS- 83 (596)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~- 83 (596)
+|++|||++|++++..... +..+++|++|+|++|.++.. ++. .+..+++|++|+|++|.++...+..+. .++
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISS-ALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHH-HHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHH-HHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3455555555554333222 44455555555555555421 111 111245555555555555433222222 233
Q ss_pred ---CCCEEEccCCcccc----cCCccccCCCCCCEEecCCCcCcCCCCCcccccc-CCCCCCCCEEECcCCCCCccCCc-
Q 036342 84 ---KLSKLSLGMNSFSG----FIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSS-LSNCKSLTLIDLSNNPLDGILPK- 154 (596)
Q Consensus 84 ---~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-~~~l~~L~~L~ls~N~l~~~~~~- 154 (596)
+|++|+|++|+|+. .++..|..+++|++|++++|.++...... +... +...++|++|++++|.+++....
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~-l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL-LCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-HHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH-HHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 35555555555542 23444555555555555555544311100 0000 12234455555555555432110
Q ss_pred --hhhhcccccccEEEccccccccccChhcc-----CCCCCCEEEccCCcccCC----CCccccCCCCCCeEEccCCccc
Q 036342 155 --TSISNLSRSLEEFYMYNCNISGGIPEEIS-----NLTNLVEIDLGGNKLNGS----IPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 155 --~~~~~l~~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
..+..+ ++|++|++++|.++...+..+. ..++|++|++++|.+++. ++..+..+++|++|++++|.++
T Consensus 162 l~~~l~~~-~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 162 LASVLRAK-PDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHC-TTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHhhC-CCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 122222 3455555555555443333332 133555555555555432 2344444555555555555544
Q ss_pred ccCc-----cchhcCCCCcEEEccCCcCccc----chhhhccCCCCcEEEeCCCcccCCC-cccc-----cccccceEEc
Q 036342 224 GSIP-----DDICRLAELYRLELGSNKLYGS----IPACFGNLASLRILSLGSNKLTSIP-LTFW-----NLKDILQLNF 288 (596)
Q Consensus 224 ~~~~-----~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ip-~~~~-----~l~~L~~L~l 288 (596)
+... ..+..+++|++|++++|.++.. ++..+..+++|++|+|++|.++... ..+. ..++|++|++
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L 320 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWV 320 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEc
Confidence 3211 1111344555555555555432 3444444555555555555554311 1111 1135555555
Q ss_pred ccCCCCCc----hhhhhccccccceEecCCCcCcccCChhhhc----cCCCCCeEECCCCcccc----cCCCC-CCCCCC
Q 036342 289 SSNFLTGP----LLLEIGNLKVLIGIDFSMNNFSGVIPREIGE----KLSYLEDLNLSFNKLKG----EIPRG-GSFGNF 355 (596)
Q Consensus 289 s~N~l~~~----~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~----~l~~L~~L~l~~N~l~~----~~p~~-~~~~~l 355 (596)
++|.+++. ++..+..++.|+.||+++|.+++..+..+.. ..+.|++|++++|++++ .+|.. ..++++
T Consensus 321 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L 400 (461)
T 1z7x_W 321 KSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL 400 (461)
T ss_dssp TTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC
T ss_pred CCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc
Confidence 55555443 2333444455555555555554322221111 13455555555555543 22222 224445
Q ss_pred Cccccccccc
Q 036342 356 SAESFEGNEL 365 (596)
Q Consensus 356 ~~l~~~~N~~ 365 (596)
+.+++++|++
T Consensus 401 ~~L~l~~N~i 410 (461)
T 1z7x_W 401 RELDLSNNCL 410 (461)
T ss_dssp CEEECCSSSC
T ss_pred cEEECCCCCC
Confidence 5555555544
No 50
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.1e-34 Score=282.79 Aligned_cols=149 Identities=28% Similarity=0.487 Sum_probs=129.7
Q ss_pred ccccccccccCCCceeehhh--------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 445 DEFSENNLIGRGGFALFIRA--------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~--------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
++|...+.||+|+||+||+| .+.|.+|+++|++++|||||+++|+|.+++..|+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 57888899999999999985 1468899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEE
Q 036342 499 VLEYMPHGSLEKYLYSSN------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHL 566 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl 566 (596)
|||||++|+|.++++... ..++|.++..++.|||+|+.||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 46899999999999999999999 889999999999999999999999
Q ss_pred eccccccccCCCCCccccccccccccccCC
Q 036342 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 567 ~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+|||+|+..............+||++||||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 199 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred CCcccceecCCCCceeecCceecChhhcCH
Confidence 999999876433322233345799999998
No 51
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.98 E-value=2.8e-33 Score=280.49 Aligned_cols=149 Identities=22% Similarity=0.396 Sum_probs=130.9
Q ss_pred ccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 445 DEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
+++...+.||+|+||+||+|. +.|.+|+.++++++|||||+++|+|.+++..|
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 356667899999999999852 46889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC
Q 036342 498 LVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM 562 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~ 562 (596)
+|||||++|+|.+++.... ..++|.++..|+.|||+|++||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996532 35899999999999999999999 88999999999999999999
Q ss_pred cEEEeccccccccCCCCCccccccccccccccCC
Q 036342 563 VAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 563 ~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.+||+|||+|+.+...+........+||++||||
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 216 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCH
Confidence 9999999999976543333334456899999998
No 52
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.98 E-value=2.1e-33 Score=284.31 Aligned_cols=148 Identities=23% Similarity=0.401 Sum_probs=125.8
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||+||+|. +.+.+|++++++++|||||++++++.+++..|+||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 4689999999999999999852 45789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 501 EYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+||+|.+++.... ..+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 9999999999997654 45789999999999999999999 899999999999999999999999999999976321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.......+||+.||||
T Consensus 179 -~~~~~~~~GT~~YmAP 194 (350)
T 4b9d_A 179 -VELARACIGTPYYLSP 194 (350)
T ss_dssp -HHHHHHHHSCCTTCCH
T ss_pred -cccccccCCCccccCH
Confidence 1123456899999998
No 53
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.98 E-value=5e-33 Score=281.33 Aligned_cols=149 Identities=26% Similarity=0.463 Sum_probs=123.1
Q ss_pred ccccccccccCCCceeehhh--------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 445 DEFSENNLIGRGGFALFIRA--------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~--------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
++|...+.||+|+||+||+| .+.|.+|+++|++++|||||+++|+|.+++..|+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 46777899999999999985 1468899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcE
Q 036342 499 VLEYMPHGSLEKYLYSSN--------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVA 564 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~--------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~ 564 (596)
|||||++|+|.++++... ..++|.+++.|+.|||+|+.||| .++|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997642 35899999999999999999999 8899999999999999999999
Q ss_pred EEeccccccccCCCCCccccccccccccccCC
Q 036342 565 HLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 565 kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||+|||+|+..............+||++||||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 229 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 229 (329)
T ss_dssp EECCCC----------------CCCCGGGCCH
T ss_pred EEcccccceeccCCCcceecCcccccccccCh
Confidence 99999999976543333334456899999998
No 54
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.98 E-value=4.8e-33 Score=281.18 Aligned_cols=145 Identities=25% Similarity=0.327 Sum_probs=131.1
Q ss_pred ccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 445 DEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
..|+..+.||+|+||+||+|. +.+.+|+.+|++++|||||+++++|.+++..|+|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 468999999999999999862 35789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccc
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~ 583 (596)
+||+|.+++... .+++.++..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999999764 4899999999999999999999 8999999999999999999999999999999764332 22
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
....+||++||||
T Consensus 227 ~~~~~GTp~YmAP 239 (346)
T 4fih_A 227 RKSLVGTPYWMAP 239 (346)
T ss_dssp BCCCCSCGGGCCH
T ss_pred ccccccCcCcCCH
Confidence 3457999999998
No 55
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.98 E-value=9e-32 Score=277.18 Aligned_cols=281 Identities=20% Similarity=0.190 Sum_probs=139.8
Q ss_pred CCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEc
Q 036342 11 NLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSL 90 (596)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 90 (596)
.....++++|+++ .+|..+. ++|++|+|++|++++ ++...+..+++|++|+|++|++++..|.+|.++++|++|+|
T Consensus 32 ~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~-~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (353)
T 2z80_A 32 RNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITY-ISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDL 107 (353)
T ss_dssp TTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcc-cCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEEC
Confidence 3344566666655 3344332 356666666666653 33323334566666666666666555555666666666666
Q ss_pred cCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCC-CCccCCchhhhcccccccEEEc
Q 036342 91 GMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNP-LDGILPKTSISNLSRSLEEFYM 169 (596)
Q Consensus 91 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~~l~~~L~~L~l 169 (596)
++|+|+++.+..|.++++|++|++++|+++.++.. ..+.++++|++|++++|. +.+..+. .+..+ ++|++|++
T Consensus 108 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~----~~~~~l~~L~~L~l~~n~~~~~~~~~-~~~~l-~~L~~L~l 181 (353)
T 2z80_A 108 SYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET----SLFSHLTKLQILRVGNMDTFTKIQRK-DFAGL-TFLEELEI 181 (353)
T ss_dssp CSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS----CSCTTCTTCCEEEEEESSSCCEECTT-TTTTC-CEEEEEEE
T ss_pred CCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch----hhhccCCCCcEEECCCCccccccCHH-HccCC-CCCCEEEC
Confidence 66666655555556666666666666666554330 135555566666665553 3332222 34444 44555555
Q ss_pred cccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchh---cCCCCcEEEccCCcC
Q 036342 170 YNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC---RLAELYRLELGSNKL 246 (596)
Q Consensus 170 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~Ls~N~l 246 (596)
++|.+++..|..|..+++|++|++++|.+....+..+..+++|++|++++|.+++..+..+. ....++.+++++|.+
T Consensus 182 ~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l 261 (353)
T 2z80_A 182 DASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKI 261 (353)
T ss_dssp EETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBC
T ss_pred CCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccc
Confidence 55555555555555555555555555555433333333455555555555555543332222 123344444444444
Q ss_pred cccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCccc
Q 036342 247 YGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 247 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~ 320 (596)
.+. .+..+|..+..+++|++|++++|+++......|..+++|+.|++++|.+++.
T Consensus 262 ~~~-------------------~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 262 TDE-------------------SLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CHH-------------------HHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCc-------------------chhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 321 0011344444455555555555555533333345555555666666655543
No 56
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=276.55 Aligned_cols=279 Identities=20% Similarity=0.240 Sum_probs=191.0
Q ss_pred CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEe
Q 036342 34 STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLG 113 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 113 (596)
+.....++++|.++ .+|... .++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+++|.++++|++|+
T Consensus 31 ~~~~~c~~~~~~l~-~iP~~~---~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 31 DRNGICKGSSGSLN-SIPSGL---TEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CTTSEEECCSTTCS-SCCTTC---CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCeEeeCCCCCcc-cccccc---cccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 44455777777776 344422 24677777777777765555677777777777777777776666777777777777
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccC-hhccCCCCCCEEE
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIP-EEISNLTNLVEID 192 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~ 192 (596)
+++|.++.+++. .|.++++|++|++++|+++++ .+ ..|..+++|++|+
T Consensus 107 Ls~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~l--------------------------~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 107 LSYNYLSNLSSS-----WFKPLSSLTFLNLLGNPYKTL--------------------------GETSLFSHLTKLQILR 155 (353)
T ss_dssp CCSSCCSSCCHH-----HHTTCTTCSEEECTTCCCSSS--------------------------CSSCSCTTCTTCCEEE
T ss_pred CCCCcCCcCCHh-----HhCCCccCCEEECCCCCCccc--------------------------CchhhhccCCCCcEEE
Confidence 777776654332 255566666666666665532 22 3455666666666
Q ss_pred ccCC-cccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 193 LGGN-KLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 193 Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
+++| .+.+..+..|..+++|++|++++|.+++..|..+..+++|++|++++|++....+..+..+++|+.|+|++|.++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 6666 355555566666667777777777766666666667777777777777765444444555677777777777777
Q ss_pred CCCcc----cccccccceEEcccCCCCC----chhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCccc
Q 036342 272 SIPLT----FWNLKDILQLNFSSNFLTG----PLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLK 343 (596)
Q Consensus 272 ~ip~~----~~~l~~L~~L~ls~N~l~~----~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~ 343 (596)
+++.. ......++.+++++|.+++ .+|..+..+++|+.||+++|+++ .+|...+..+++|++|++++|++.
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCcc
Confidence 65432 1235667888888888876 36777889999999999999999 678877788999999999999999
Q ss_pred ccCCC
Q 036342 344 GEIPR 348 (596)
Q Consensus 344 ~~~p~ 348 (596)
+.+|.
T Consensus 315 ~~~~~ 319 (353)
T 2z80_A 315 CSCPR 319 (353)
T ss_dssp CCHHH
T ss_pred CcCCC
Confidence 87763
No 57
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=2e-31 Score=269.01 Aligned_cols=249 Identities=26% Similarity=0.287 Sum_probs=176.8
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccc--cCccccCCCCCCEEEc
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGT--IPRFIFNASKLSKLSL 90 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~l~~L~~L~L 90 (596)
+.+++++++++ .+|..+ .++|++|+|++|+++ .++...+..+++|++|+|++|.++.. .+..+.++++|++|+|
T Consensus 10 ~~l~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~-~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L 85 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQ-SLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDL 85 (306)
T ss_dssp TEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEEC
T ss_pred CEEEcCCCCcc-cCCCCC--CCCCCEEECCCCccC-ccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEEC
Confidence 57888888886 455544 367888888888887 55554455688888888888888732 3667777888888888
Q ss_pred cCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcc
Q 036342 91 GMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMY 170 (596)
Q Consensus 91 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~ 170 (596)
++|.++. +|..|.++++|++|++++|.++...+. ..+..+++|++|++++|.+++..+. .+..+ ++|++|+++
T Consensus 86 s~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l-~~L~~L~l~ 158 (306)
T 2z66_A 86 SFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF----SVFLSLRNLIYLDISHTHTRVAFNG-IFNGL-SSLEVLKMA 158 (306)
T ss_dssp CSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTT----TTTTTCTTCCEEECTTSCCEECSTT-TTTTC-TTCCEEECT
T ss_pred CCCcccc-ChhhcCCCCCCCEEECCCCcccccccc----hhhhhccCCCEEECCCCcCCccchh-hcccC-cCCCEEECC
Confidence 8888875 455688888888888888888776431 2467777888888888877765544 45555 567777777
Q ss_pred cccccc-ccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCccc
Q 036342 171 NCNISG-GIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGS 249 (596)
Q Consensus 171 ~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 249 (596)
+|.+++ ..|..|..+++|++|++++|.+++..|..|..+++|++|++++|.+++..+..+..+++|+.|++++|++++.
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 238 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBC
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCccc
Confidence 777765 5666677777777777777777766666677777777777777777655555666667777777777777666
Q ss_pred chhhhccCC-CCcEEEeCCCcccC
Q 036342 250 IPACFGNLA-SLRILSLGSNKLTS 272 (596)
Q Consensus 250 ~p~~~~~l~-~L~~L~Ls~N~l~~ 272 (596)
.|..+..++ +|++|+|++|.++.
T Consensus 239 ~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 239 KKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp SSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CHHHHHhhhccCCEEEccCCCeec
Confidence 666666663 66666666666654
No 58
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=3.7e-34 Score=305.98 Aligned_cols=337 Identities=20% Similarity=0.185 Sum_probs=268.0
Q ss_pred cCCCCCCCEEECCCCCCccc----cchhhhCCCCCCEEEccCCcCccccCccCccCCC----CccEEEccCCcccc----
Q 036342 6 IGNLQNLEELQLGQNKLIGT----VPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLP----NLEKLYLWGNNFSG---- 73 (596)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~----~L~~L~L~~N~l~~---- 73 (596)
+..+++|++|+|++|++++. ++..+..+++|++|+|++|.++..........++ +|++|+|++|.++.
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 56688999999999999853 4677888899999999999997433321112244 79999999999984
Q ss_pred ccCccccCCCCCCEEEccCCcccccCCcccc-----CCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCC
Q 036342 74 TIPRFIFNASKLSKLSLGMNSFSGFIPSTFG-----NLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPL 148 (596)
Q Consensus 74 ~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~-----~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l 148 (596)
.++..+..+++|++|+|++|.+++..+..+. ..++|++|++++|.++..... .++..+..+++|++|++++|.+
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i 182 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE-PLASVLRAKPDFKELTVSNNDI 182 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH-HHHHHHHHCTTCCEEECCSSBC
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH-HHHHHHhhCCCCCEEECcCCCc
Confidence 5688899999999999999999866555443 356899999999998864321 1334567789999999999998
Q ss_pred CccCCchhhhc-c---cccccEEEccccccccc----cChhccCCCCCCEEEccCCcccCCC-----CccccCCCCCCeE
Q 036342 149 DGILPKTSISN-L---SRSLEEFYMYNCNISGG----IPEEISNLTNLVEIDLGGNKLNGSI-----PITLGKLRKLQRL 215 (596)
Q Consensus 149 ~~~~~~~~~~~-l---~~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L 215 (596)
++..+. .+.. + .++|++|++++|.+++. ++..+..+++|++|++++|.+.+.. +..+..+++|++|
T Consensus 183 ~~~~~~-~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L 261 (461)
T 1z7x_W 183 NEAGVR-VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTL 261 (461)
T ss_dssp HHHHHH-HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEE
T ss_pred chHHHH-HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEE
Confidence 754222 2211 1 14899999999999874 5778888999999999999987643 2333468999999
Q ss_pred EccCCccccc----CccchhcCCCCcEEEccCCcCcccchhhhccC-----CCCcEEEeCCCcccC-----CCccccccc
Q 036342 216 NLEDNILEGS----IPDDICRLAELYRLELGSNKLYGSIPACFGNL-----ASLRILSLGSNKLTS-----IPLTFWNLK 281 (596)
Q Consensus 216 ~L~~N~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~-----ip~~~~~l~ 281 (596)
++++|.++.. ++..+..+++|+.|++++|.+.+..+..+... ++|+.|+|++|.++. ++..+..++
T Consensus 262 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~ 341 (461)
T 1z7x_W 262 WIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNR 341 (461)
T ss_dssp ECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCS
T ss_pred ECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCC
Confidence 9999999854 67778889999999999999986666555543 799999999999986 355677789
Q ss_pred ccceEEcccCCCCCchhhhhcc-----ccccceEecCCCcCcc----cCChhhhccCCCCCeEECCCCccccc
Q 036342 282 DILQLNFSSNFLTGPLLLEIGN-----LKVLIGIDFSMNNFSG----VIPREIGEKLSYLEDLNLSFNKLKGE 345 (596)
Q Consensus 282 ~L~~L~ls~N~l~~~~~~~~~~-----l~~L~~L~ls~N~~~~----~~~~~~~~~l~~L~~L~l~~N~l~~~ 345 (596)
+|++|++++|.+++..+..+.. .+.|+.|++++|.+++ .+|. .+..+++|++|++++|++++.
T Consensus 342 ~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~-~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 342 FLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA-TLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp SCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH-HHHHCCCCCEEECCSSSCCHH
T ss_pred CccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHH-HHHhCCCccEEECCCCCCCHH
Confidence 9999999999998876666553 6799999999999985 5666 456789999999999999764
No 59
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=8.2e-33 Score=296.69 Aligned_cols=30 Identities=17% Similarity=0.203 Sum_probs=26.0
Q ss_pred HHhHHHHHHHHhhcCCCccceeeeeeccCC
Q 036342 465 FKSFDVECEMMKSIRHRNLIKVISSCSNEE 494 (596)
Q Consensus 465 ~~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 494 (596)
.+.|..|++++.+++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 578999999999999999999999997754
No 60
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=283.16 Aligned_cols=146 Identities=25% Similarity=0.325 Sum_probs=131.8
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.+.|+..+.||+|+||+||+|. +.+.+|+.+|++++|||||+++++|.+++.+|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 3569999999999999999862 4588999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
|+||+|.++++.. .+++.++..++.||+.||+||| +++|+||||||+|||++.+|.+||+|||+|+.+.... .
T Consensus 230 ~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 302 (423)
T 4fie_A 230 LEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--P 302 (423)
T ss_dssp CTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--C
T ss_pred CCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--c
Confidence 9999999999765 4899999999999999999999 8999999999999999999999999999999764332 2
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
.....+||++||||
T Consensus 303 ~~~~~~GTp~YmAP 316 (423)
T 4fie_A 303 RRKSLVGTPYWMAP 316 (423)
T ss_dssp CBCCCEECTTTCCH
T ss_pred cccccccCcCcCCH
Confidence 23557999999998
No 61
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=3e-32 Score=269.87 Aligned_cols=141 Identities=28% Similarity=0.477 Sum_probs=122.7
Q ss_pred cccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeecc----CCeeEEEE
Q 036342 448 SENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSN----EEFKALVL 500 (596)
Q Consensus 448 ~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~lV~ 500 (596)
...+.||+|+||+||+|. +.+.+|+.++++++|||||+++++|.. ++.+|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 556789999999999852 458899999999999999999999864 34689999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeCC-CCcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~~-~~~~kl~dfGla~~~~~ 577 (596)
|||++|+|.++++... .+++..+..++.||+.||+||| +++ |+||||||+|||++. ++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999998754 6899999999999999999999 766 999999999999984 79999999999986432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .....+||+.||||
T Consensus 185 ~----~~~~~~GTp~YmAP 199 (290)
T 3fpq_A 185 S----FAKAVIGTPEFMAP 199 (290)
T ss_dssp T----SBEESCSSCCCCCG
T ss_pred C----ccCCcccCccccCH
Confidence 1 23457899999999
No 62
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=1.6e-32 Score=276.48 Aligned_cols=149 Identities=24% Similarity=0.296 Sum_probs=127.6
Q ss_pred cccccccccccCCCceeehhhH----------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCCCCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHGS 507 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g~ 507 (596)
.+.|...+.||+|+||+||+|. ....+|+.++++++|||||++++++.+++..|+|||||+||+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 4578888999999999999863 123579999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC-cEEEeccccccccCCCCCc---cc
Q 036342 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM-VAHLSDFSIAKLLTGEDQS---MT 583 (596)
Q Consensus 508 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~-~~kl~dfGla~~~~~~~~~---~~ 583 (596)
|.++++..+ .+++.++..++.||+.||+||| +++|+||||||+|||++.++ .+||+|||+|+.+...... ..
T Consensus 137 L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~ 212 (336)
T 4g3f_A 137 LGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212 (336)
T ss_dssp HHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----------
T ss_pred HHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceec
Confidence 999998764 6899999999999999999999 99999999999999999987 6999999999976533211 12
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
....+||+.||||
T Consensus 213 ~~~~~GT~~YmAP 225 (336)
T 4g3f_A 213 GDYIPGTETHMAP 225 (336)
T ss_dssp -CCCCCCGGGCCH
T ss_pred CCccccCccccCH
Confidence 2346899999998
No 63
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.97 E-value=6.7e-33 Score=275.94 Aligned_cols=146 Identities=26% Similarity=0.377 Sum_probs=124.4
Q ss_pred ccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
++|+..+.||+|+||+||+|. ..+.+|++++++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 579999999999999999752 247789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
|||||+||+|.+++.... .+++.++..++.|++.||+||| +++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999998764 6899999999999999999999 899999999999999999999999999999865432
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
. ......+||+.||||
T Consensus 180 ~--~~~~~~~GT~~YmAP 195 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAP 195 (304)
T ss_dssp ---CCCCSCCCCGGGCCH
T ss_pred C--ccccccccCcccCCH
Confidence 2 123457899999998
No 64
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=3.7e-32 Score=266.89 Aligned_cols=144 Identities=24% Similarity=0.468 Sum_probs=117.9
Q ss_pred ccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++|+..+.||+|+||+||+|. +.+.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 689999999999999999852 35789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||| +|+|.+++...+ .+++.++..++.|++.|++||| +++|+||||||+|||+++++.+||+|||+|+.....
T Consensus 93 Ey~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp ECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 999 689999998764 6899999999999999999999 899999999999999999999999999999875432
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......+||+.||||
T Consensus 166 -~~~~~~~GT~~Y~AP 180 (275)
T 3hyh_A 166 -NFLKTSCGSPNYAAP 180 (275)
T ss_dssp ----------CTTSCH
T ss_pred -CccCCeeECcccCCh
Confidence 123457899999998
No 65
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.4e-30 Score=260.00 Aligned_cols=254 Identities=21% Similarity=0.213 Sum_probs=154.8
Q ss_pred CEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 37 KFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 37 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
++++.+++.++ .+|.. . .++|++|+|++|.+++..+..|..+++|++|+|++|.|+++.+..|.++++|++|++++
T Consensus 14 ~~~~c~~~~l~-~ip~~-~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVG-I--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTT-C--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcC-C--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 45566666555 23321 1 34566666666666655555566666666666666666666666666666666666666
Q ss_pred Cc-CcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC
Q 036342 117 NY-LTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG 195 (596)
Q Consensus 117 N~-l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 195 (596)
|. ++.+.+. .+..+++|++|++++|.+++..+. .+..+ ++|++|++++|.+++..+..|..+++|++|++++
T Consensus 90 n~~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 90 NAQLRSVDPA-----TFHGLGRLHTLHLDRCGLQELGPG-LFRGL-AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp CTTCCCCCTT-----TTTTCTTCCEEECTTSCCCCCCTT-TTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCCccccCHH-----HhcCCcCCCEEECCCCcCCEECHh-HhhCC-cCCCEEECCCCcccccCHhHhccCCCccEEECCC
Confidence 65 5554332 355566666666666666554333 34444 4566666666666655556677777777777777
Q ss_pred CcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc
Q 036342 196 NKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL 275 (596)
Q Consensus 196 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~ 275 (596)
|.+++..+..|..+++|++|++++|.+++..|..+..+++|+.|++++|++++..+..+..+++|+.|+|++|.+..-..
T Consensus 163 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 77776666667777777777777777776667777777777777777777776666667777777777777777764222
Q ss_pred ccccccccceEEcccCCCCCchhhhh
Q 036342 276 TFWNLKDILQLNFSSNFLTGPLLLEI 301 (596)
Q Consensus 276 ~~~~l~~L~~L~ls~N~l~~~~~~~~ 301 (596)
..+-...++.+..+.|.+....|..+
T Consensus 243 ~~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 243 ARPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp GHHHHHHHHHCCSEECCCBEEESGGG
T ss_pred cHHHHHHHHhcccccCccccCCchHh
Confidence 11111223333444555554444443
No 66
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.97 E-value=3.2e-32 Score=277.60 Aligned_cols=160 Identities=24% Similarity=0.413 Sum_probs=138.3
Q ss_pred ccCHHHHHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCC-Cccce
Q 036342 434 TFSYLELCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRH-RNLIK 485 (596)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H-~niv~ 485 (596)
.++..+|+...++|+..+.||+|+||+||+|. +.+.+|+.+|++++| ||||+
T Consensus 53 p~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~ 132 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 132 (353)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred CCCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEE
Confidence 35566788888999999999999999999851 357889999999976 89999
Q ss_pred eeeeeccC-CeeEEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeC
Q 036342 486 VISSCSNE-EFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHC 549 (596)
Q Consensus 486 l~~~~~~~-~~~~lV~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hr 549 (596)
++|+|.++ +..|+|||||++|+|.++++... ..+++.++..++.|||+|++||| +++||||
T Consensus 133 l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHR 209 (353)
T 4ase_A 133 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 209 (353)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecC
Confidence 99999764 56899999999999999997532 34789999999999999999999 8999999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 550 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 550 dlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||||+|||+++++.+||+|||+|+.+............+||++||||
T Consensus 210 DLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 256 (353)
T 4ase_A 210 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256 (353)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred ccCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence 99999999999999999999999977544433344557899999998
No 67
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=9.7e-31 Score=263.92 Aligned_cols=279 Identities=18% Similarity=0.204 Sum_probs=159.0
Q ss_pred CCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCccccc--CCccccCCCCCCEEe
Q 036342 36 LKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGF--IPSTFGNLRNLEQLG 113 (596)
Q Consensus 36 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~--~~~~~~~l~~L~~L~ 113 (596)
-+.++++++.++ .+|... .++|++|+|++|+++...+..|.++++|++|+|++|.++.. .+..+.++++|++|+
T Consensus 9 ~~~l~c~~~~l~-~ip~~~---~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp TTEEECCSSCCS-SCCSCC---CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CCEEEcCCCCcc-cCCCCC---CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 357888888887 444422 35788888888888855555678888888888888888743 356677788888888
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEc
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDL 193 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 193 (596)
+++|.++.++ ..+..+++|++|++++|++++..+...+..+ ++|++|++++|.+++..+..|..+++|++|++
T Consensus 85 Ls~n~i~~l~------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 157 (306)
T 2z66_A 85 LSFNGVITMS------SNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL-RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 157 (306)
T ss_dssp CCSCSEEEEE------EEEETCTTCCEEECTTSEEESSTTTTTTTTC-TTCCEEECTTSCCEECSTTTTTTCTTCCEEEC
T ss_pred CCCCccccCh------hhcCCCCCCCEEECCCCcccccccchhhhhc-cCCCEEECCCCcCCccchhhcccCcCCCEEEC
Confidence 8888777533 2366677777777777777654332233444 34555555555555544555555555555555
Q ss_pred cCCcccC-CCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC
Q 036342 194 GGNKLNG-SIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS 272 (596)
Q Consensus 194 s~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 272 (596)
++|.+.+ ..|..+..+++|++|++++|.+++..|..+..+++|+.|+|++|++++..+..+..
T Consensus 158 ~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~---------------- 221 (306)
T 2z66_A 158 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC---------------- 221 (306)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTT----------------
T ss_pred CCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccC----------------
Confidence 5555543 34444444555555555555554444444444444444444444444444434444
Q ss_pred CCcccccccccceEEcccCCCCCchhhhhccc-cccceEecCCCcCcccCCh-hhhccCCCCCeEECCCCcccccCCC
Q 036342 273 IPLTFWNLKDILQLNFSSNFLTGPLLLEIGNL-KVLIGIDFSMNNFSGVIPR-EIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 273 ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l-~~L~~L~ls~N~~~~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
+++|++|++++|++++..+..+..+ +.|+.|++++|.+++.-+. ++...+...+.+....+.+.+..|.
T Consensus 222 -------l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 222 -------LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp -------CTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred -------cccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 4555555555555555445455544 2555555555555533221 1122223344445555566655554
No 68
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=6.1e-32 Score=270.00 Aligned_cols=149 Identities=23% Similarity=0.448 Sum_probs=117.9
Q ss_pred ccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC--------
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE-------- 494 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~-------- 494 (596)
++|+..+.||+|+||+||+|. +.+.+|++++++++|||||+++++|.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 479999999999999999852 45789999999999999999999986543
Q ss_pred ----eeEEEEecCCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEec
Q 036342 495 ----FKALVLEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 495 ----~~~lV~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
..|+|||||++|+|.+++.... ...++..+..++.|+++||+||| +++|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 3799999999999999998754 23466778899999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCc----------cccccccccccccCC
Q 036342 569 FSIAKLLTGEDQS----------MTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~----------~~~~~~~gt~~y~aP 596 (596)
||+|+.+...... ...+..+||+.||||
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP 199 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP 199 (299)
T ss_dssp CCCC--------------------------CCCTTSCH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCH
Confidence 9999976533211 112346899999998
No 69
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=5.4e-30 Score=272.92 Aligned_cols=247 Identities=24% Similarity=0.263 Sum_probs=203.0
Q ss_pred CCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEec
Q 036342 35 TLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGL 114 (596)
Q Consensus 35 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 114 (596)
+...++.+++.++ .+|... .++|++|+|++|+|++..+..|.++++|++|+|++|+|+++.++.|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCC---CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 4567888888887 444422 357888888888888877888888888888888888888888888888888888888
Q ss_pred CCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccc-cccccccChhccCCCCCCEEEc
Q 036342 115 DENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYN-CNISGGIPEEISNLTNLVEIDL 193 (596)
Q Consensus 115 ~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L 193 (596)
++|.++.+++. .|.++++|++|+|++|+++.+.+. .+..+ ++|++|++++ |.+..+.+..|.++++|++|++
T Consensus 131 ~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L 203 (452)
T 3zyi_A 131 FDNWLTVIPSG-----AFEYLSKLRELWLRNNPIESIPSY-AFNRV-PSLMRLDLGELKKLEYISEGAFEGLFNLKYLNL 203 (452)
T ss_dssp CSSCCSBCCTT-----TSSSCTTCCEEECCSCCCCEECTT-TTTTC-TTCCEEECCCCTTCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcCCccChh-----hhcccCCCCEEECCCCCcceeCHh-HHhcC-CcccEEeCCCCCCccccChhhccCCCCCCEEEC
Confidence 88888876654 477888888888888888765433 66666 6788888888 5555555667889999999999
Q ss_pred cCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC
Q 036342 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI 273 (596)
Q Consensus 194 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i 273 (596)
++|.+++. | .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+++.+
T Consensus 204 ~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 281 (452)
T 3zyi_A 204 GMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281 (452)
T ss_dssp TTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCcc
Confidence 99999864 3 477889999999999999988888999999999999999999988888999999999999999999997
Q ss_pred Ccc-cccccccceEEcccCCCC
Q 036342 274 PLT-FWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 274 p~~-~~~l~~L~~L~ls~N~l~ 294 (596)
|.. +..+++|+.|+|++|++.
T Consensus 282 ~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 282 PHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTSSTTCTTCCEEECCSSCEE
T ss_pred ChHHhccccCCCEEEccCCCcC
Confidence 764 567899999999999875
No 70
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=8e-30 Score=270.65 Aligned_cols=247 Identities=23% Similarity=0.235 Sum_probs=204.1
Q ss_pred CCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEec
Q 036342 35 TLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGL 114 (596)
Q Consensus 35 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 114 (596)
+...++.+++.++ .+|... .++++.|+|++|++++..+..|.++++|++|+|++|+|+++.+++|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 4678888888887 455422 367888888888888777788888888888888888888888888888888888888
Q ss_pred CCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccc-cccccccChhccCCCCCCEEEc
Q 036342 115 DENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYN-CNISGGIPEEISNLTNLVEIDL 193 (596)
Q Consensus 115 ~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~L 193 (596)
++|+++.+++. .|.++++|++|+|++|.++.+.+. .+..+ ++|++|++++ |.++.+.+..|.++++|++|++
T Consensus 120 ~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~i~~~~~~-~~~~l-~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L 192 (440)
T 3zyj_A 120 FDNRLTTIPNG-----AFVYLSKLKELWLRNNPIESIPSY-AFNRI-PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNL 192 (440)
T ss_dssp CSSCCSSCCTT-----TSCSCSSCCEEECCSCCCCEECTT-TTTTC-TTCCEEECCCCTTCCEECTTTTTTCSSCCEEEC
T ss_pred CCCcCCeeCHh-----HhhccccCceeeCCCCcccccCHH-HhhhC-cccCEeCCCCCCCcceeCcchhhcccccCeecC
Confidence 88888876654 478888888888888888765443 66676 6788888888 4555555668889999999999
Q ss_pred cCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC
Q 036342 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI 273 (596)
Q Consensus 194 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i 273 (596)
++|.++.. | .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+++.+
T Consensus 193 ~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 270 (440)
T 3zyj_A 193 AMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLL 270 (440)
T ss_dssp TTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCC
T ss_pred CCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCcc
Confidence 99999854 4 478889999999999999988888899999999999999999988888999999999999999999997
Q ss_pred Ccc-cccccccceEEcccCCCC
Q 036342 274 PLT-FWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 274 p~~-~~~l~~L~~L~ls~N~l~ 294 (596)
|.. +..+++|+.|+|++|++.
T Consensus 271 ~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 271 PHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTTTSSCTTCCEEECCSSCEE
T ss_pred ChhHhccccCCCEEEcCCCCcc
Confidence 764 567899999999999875
No 71
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=5.4e-32 Score=274.45 Aligned_cols=257 Identities=22% Similarity=0.204 Sum_probs=154.3
Q ss_pred CCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecC
Q 036342 36 LKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115 (596)
Q Consensus 36 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 115 (596)
++.++++.+.+...+... +..+++|++|+|++|++++..|..|.++++|++|+|++|++++..+ |..+++|++|+++
T Consensus 12 l~i~~ls~~~l~~~~~~~-~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASL-RQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHHH-HTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHHH-hccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECc
Confidence 344455555554322221 2235566677777666665555666666777777777777665543 6666777777777
Q ss_pred CCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC
Q 036342 116 ENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG 195 (596)
Q Consensus 116 ~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 195 (596)
+|.+++++ ..++|+.|++++|++++..+. .+ ++|++|++++|++++..+..|..+++|++|++++
T Consensus 89 ~n~l~~l~----------~~~~L~~L~l~~n~l~~~~~~----~~-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 89 NNYVQELL----------VGPSIETLHAANNNISRVSCS----RG-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp SSEEEEEE----------ECTTCCEEECCSSCCSEEEEC----CC-SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred CCcccccc----------CCCCcCEEECCCCccCCcCcc----cc-CCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 77665432 225666677777766654322 12 4566666666666666666666666677777777
Q ss_pred CcccCCCCcccc-CCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCC
Q 036342 196 NKLNGSIPITLG-KLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274 (596)
Q Consensus 196 N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip 274 (596)
|.+++..+..+. .+++|++|++++|.+++. + ....+++|+.|+|++|++++.. ..+..+++|+.|+|++|.++.+|
T Consensus 154 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~~l~ 230 (317)
T 3o53_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLVLIE 230 (317)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCCEEC
T ss_pred CCCCcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCcccchh
Confidence 766665555543 566666777766666643 2 2223566666666666666433 33666666666666666666666
Q ss_pred cccccccccceEEcccCCCC-CchhhhhccccccceEecC
Q 036342 275 LTFWNLKDILQLNFSSNFLT-GPLLLEIGNLKVLIGIDFS 313 (596)
Q Consensus 275 ~~~~~l~~L~~L~ls~N~l~-~~~~~~~~~l~~L~~L~ls 313 (596)
..+..+++|+.|++++|+++ +..+..+..++.|+.|+++
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 66666666666666666665 4455555555555555554
No 72
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=3.6e-31 Score=265.67 Aligned_cols=150 Identities=27% Similarity=0.413 Sum_probs=121.5
Q ss_pred ccccccccccCCCceeehhhH----------------HhH--HHHHHHHhhcCCCccceeeeeeccCC----eeEEEEec
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------KSF--DVECEMMKSIRHRNLIKVISSCSNEE----FKALVLEY 502 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------~~~--~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lV~e~ 502 (596)
.+|...+.||+|+||+||+|. +.+ ..|+..+.+++|||||+++++|.+++ ..|+||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 357778999999999999963 223 34566667899999999999997654 57999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
|++|+|.++++.. .++|.++.+++.|+++|++|+|.. +.++|+||||||+|||++.++.+||+|||+|+....
T Consensus 83 ~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred CCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 9999999999875 488999999999999999999932 234999999999999999999999999999987654
Q ss_pred CCCcc--ccccccccccccCC
Q 036342 578 EDQSM--TQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~--~~~~~~gt~~y~aP 596 (596)
..... .....+||++||||
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAP 181 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTEESCC-----CCGGGCCH
T ss_pred CCCceeeecccccccccccCH
Confidence 33211 22346899999998
No 73
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.1e-29 Score=268.30 Aligned_cols=247 Identities=24% Similarity=0.293 Sum_probs=188.7
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT 139 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~ 139 (596)
+...++.+++.++ .+|..+. ++|++|+|++|+|+++.++.|.++++|++|+|++|.++.+.+. .|.++++|+
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-----~~~~l~~L~ 126 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVG-----AFNGLASLN 126 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-----TTTTCTTCC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChh-----hccCcccCC
Confidence 3567778877777 5665543 5788888888888888788888888888888888888776543 577888888
Q ss_pred EEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC-CcccCCCCccccCCCCCCeEEcc
Q 036342 140 LIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITLGKLRKLQRLNLE 218 (596)
Q Consensus 140 ~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~ 218 (596)
+|+|++|+++++.+. .+..+ ++|++|+|++|.|+.+.+..|..+++|++|++++ |.+....+..|.++++|++|+++
T Consensus 127 ~L~L~~n~l~~~~~~-~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 204 (452)
T 3zyi_A 127 TLELFDNWLTVIPSG-AFEYL-SKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLG 204 (452)
T ss_dssp EEECCSSCCSBCCTT-TSSSC-TTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECT
T ss_pred EEECCCCcCCccChh-hhccc-CCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECC
Confidence 888888888765443 56666 6788888888888877777788888888888887 45555555567788888888888
Q ss_pred CCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCch
Q 036342 219 DNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPL 297 (596)
Q Consensus 219 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~ 297 (596)
+|.+++ +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|.++.+ |..+..+++|+.|+|++|++++..
T Consensus 205 ~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 205 MCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp TSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccC
Confidence 888874 34 477778888888888888877788888888888888888888875 445777888888888888888777
Q ss_pred hhhhccccccceEecCCCcCc
Q 036342 298 LLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~~~ 318 (596)
+..+..+++|+.|++++|.+.
T Consensus 283 ~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 283 HDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTSSTTCTTCCEEECCSSCEE
T ss_pred hHHhccccCCCEEEccCCCcC
Confidence 777778888888888888776
No 74
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=3.9e-29 Score=273.77 Aligned_cols=263 Identities=26% Similarity=0.319 Sum_probs=198.4
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEE
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLS 89 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (596)
.++++|++++|+|+ .+|..+. ++|++|+|++|.|+ .++. .+++|++|+|++|+|+ .+|. .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPV---LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC----CCTTCCEEEECSCCCS-CCCC---CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC----cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEE
Confidence 35888999999987 5666554 78999999999987 4554 2688999999999988 4555 678899999
Q ss_pred ccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEc
Q 036342 90 LGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYM 169 (596)
Q Consensus 90 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l 169 (596)
|++|+|+++.+ .+++|+.|++++|+++.++.. +++|++|++++|.++++ |. .+.+|+.|++
T Consensus 108 Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~lp~~---------l~~L~~L~Ls~N~l~~l-~~-----~~~~L~~L~L 168 (622)
T 3g06_A 108 IFSNPLTHLPA----LPSGLCKLWIFGNQLTSLPVL---------PPGLQELSVSDNQLASL-PA-----LPSELCKLWA 168 (622)
T ss_dssp ECSCCCCCCCC----CCTTCCEEECCSSCCSCCCCC---------CTTCCEEECCSSCCSCC-CC-----CCTTCCEEEC
T ss_pred CcCCcCCCCCC----CCCCcCEEECCCCCCCcCCCC---------CCCCCEEECcCCcCCCc-CC-----ccCCCCEEEC
Confidence 99999887544 567888999999988876432 37888899999988764 22 2357888888
Q ss_pred cccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCccc
Q 036342 170 YNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGS 249 (596)
Q Consensus 170 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 249 (596)
++|.|+++ | ..+++|+.|++++|.+++. |. .+++|+.|++++|.++ .+|.. +++|+.|+|++|++++
T Consensus 169 ~~N~l~~l-~---~~~~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~- 235 (622)
T 3g06_A 169 YNNQLTSL-P---MLPSGLQELSVSDNQLASL-PT---LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS- 235 (622)
T ss_dssp CSSCCSCC-C---CCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-
T ss_pred CCCCCCCC-c---ccCCCCcEEECCCCCCCCC-CC---ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-
Confidence 88888864 4 4567888888888888853 33 2478888888888887 45543 4678888888888875
Q ss_pred chhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCCh
Q 036342 250 IPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPR 323 (596)
Q Consensus 250 ~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~ 323 (596)
+| ..+++|+.|+|++|.|+.+|. .+++|+.|+|++|+|+ .+|..+..+++|+.|++++|.+++.+|.
T Consensus 236 lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 236 LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 44 455778888888888888776 5677888888888887 4466777788888888888888766555
No 75
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.9e-29 Score=266.29 Aligned_cols=247 Identities=25% Similarity=0.296 Sum_probs=172.1
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT 139 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~ 139 (596)
....++.+++.++ .+|..+. ++++.|+|++|+|+++.+..|.++++|++|+|++|.++.+.+. .|.++++|+
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~-----~~~~l~~L~ 115 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIG-----AFNGLANLN 115 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGG-----GGTTCSSCC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChh-----hccCCccCC
Confidence 3556777777776 5565543 5677777777777777777777777777777777777665433 467777777
Q ss_pred EEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC-CcccCCCCccccCCCCCCeEEcc
Q 036342 140 LIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITLGKLRKLQRLNLE 218 (596)
Q Consensus 140 ~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~ 218 (596)
+|+|++|+++++.+. .+..+ ++|++|+|++|.|+...+..|..+++|++|++++ |.+....+..|.++++|++|+++
T Consensus 116 ~L~L~~n~l~~~~~~-~~~~l-~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 193 (440)
T 3zyj_A 116 TLELFDNRLTTIPNG-AFVYL-SKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193 (440)
T ss_dssp EEECCSSCCSSCCTT-TSCSC-SSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECT
T ss_pred EEECCCCcCCeeCHh-Hhhcc-ccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCC
Confidence 777777777655333 55555 5677777777777776666777777777777777 34444445567777777777777
Q ss_pred CCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCch
Q 036342 219 DNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPL 297 (596)
Q Consensus 219 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~ 297 (596)
+|.++ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|+++.+ +..|..+++|+.|+|++|++++..
T Consensus 194 ~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 271 (440)
T 3zyj_A 194 MCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLP 271 (440)
T ss_dssp TSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCC
T ss_pred CCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccC
Confidence 77777 344 466677777777777777766677777777777777777777775 345666777777777777777776
Q ss_pred hhhhccccccceEecCCCcCc
Q 036342 298 LLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 298 ~~~~~~l~~L~~L~ls~N~~~ 318 (596)
+..|..+++|+.|+|++|.+.
T Consensus 272 ~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 272 HDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTTTSSCTTCCEEECCSSCEE
T ss_pred hhHhccccCCCEEEcCCCCcc
Confidence 667777777777777777765
No 76
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.97 E-value=1.2e-31 Score=271.90 Aligned_cols=266 Identities=22% Similarity=0.203 Sum_probs=215.5
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT 139 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~ 139 (596)
+++.++++.+.+....+..+..+++|++|+|++|+|++..|+.|.++++|++|++++|.+++.. .+..+++|+
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~ 83 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLR 83 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCC
Confidence 4667788888888666666777889999999999999998899999999999999999998643 278899999
Q ss_pred EEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccC
Q 036342 140 LIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED 219 (596)
Q Consensus 140 ~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 219 (596)
+|++++|.+++..+ . ++|++|++++|.+++..+.. +++|++|++++|.+++..+..+..+++|++|++++
T Consensus 84 ~L~Ls~n~l~~l~~------~-~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (317)
T 3o53_A 84 TLDLNNNYVQELLV------G-PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (317)
T ss_dssp EEECCSSEEEEEEE------C-TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTT
T ss_pred EEECcCCccccccC------C-CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCC
Confidence 99999999886532 2 67999999999998876554 57789999999999988888888899999999999
Q ss_pred CcccccCccchh-cCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchh
Q 036342 220 NILEGSIPDDIC-RLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLL 298 (596)
Q Consensus 220 N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~ 298 (596)
|.+++..+..+. .+++|++|+|++|.+++. +. ...+++|+.|+|++|+++++|..+..+++|+.|++++|+++. +|
T Consensus 154 N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~ 230 (317)
T 3o53_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IE 230 (317)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-EC
T ss_pred CCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hh
Confidence 999877777664 688999999999998855 32 334788999999999998888888888888888888888884 56
Q ss_pred hhhccccccceEecCCCcCc-ccCChhhhccCCCCCeEECCCC-cccccC
Q 036342 299 LEIGNLKVLIGIDFSMNNFS-GVIPREIGEKLSYLEDLNLSFN-KLKGEI 346 (596)
Q Consensus 299 ~~~~~l~~L~~L~ls~N~~~-~~~~~~~~~~l~~L~~L~l~~N-~l~~~~ 346 (596)
..+..+++|+.|++++|.++ +.+|. ++..++.|+.|++++| .+++..
T Consensus 231 ~~~~~l~~L~~L~l~~N~~~~~~~~~-~~~~~~~L~~l~l~~~~~l~~~~ 279 (317)
T 3o53_A 231 KALRFSQNLEHFDLRGNGFHCGTLRD-FFSKNQRVQTVAKQTVKKLTGQN 279 (317)
T ss_dssp TTCCCCTTCCEEECTTCCCBHHHHHH-HHHTCHHHHHHHHHHHHHHHSSS
T ss_pred hHhhcCCCCCEEEccCCCccCcCHHH-HHhccccceEEECCCchhccCCc
Confidence 67788888888888888887 44444 5667777788877743 444433
No 77
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.97 E-value=1.6e-29 Score=252.23 Aligned_cols=254 Identities=22% Similarity=0.224 Sum_probs=154.6
Q ss_pred ccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCE
Q 036342 61 LEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTL 140 (596)
Q Consensus 61 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~ 140 (596)
-+.++.+++.++ .+|..+ .++|++|+|++|.|+++.++.|.++++|++|++++|.++.+.+. .|.++++|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~ 84 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAA-----AFTGLALLEQ 84 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTT-----TTTTCTTCCE
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHh-----hcCCccCCCE
Confidence 367888888888 556544 46899999999999988888888899999999999988876443 5778888888
Q ss_pred EECcCCC-CCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccC
Q 036342 141 IDLSNNP-LDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED 219 (596)
Q Consensus 141 L~ls~N~-l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 219 (596)
|++++|. ++...+. .+..+ ++|++|++++|.+++..|..|.++++|++|++++|.+++..+..|..+++|++|++++
T Consensus 85 L~l~~n~~l~~~~~~-~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 162 (285)
T 1ozn_A 85 LDLSDNAQLRSVDPA-TFHGL-GRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHG 162 (285)
T ss_dssp EECCSCTTCCCCCTT-TTTTC-TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCCCCccccCHH-HhcCC-cCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCC
Confidence 8888886 5544333 44444 4566666666666655555555566666666666666555555555555555555555
Q ss_pred CcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhh
Q 036342 220 NILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLL 299 (596)
Q Consensus 220 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~ 299 (596)
|.+++..+..+..+++|+.|++++|++++..|..|..+++|+.|+|++|.+++ ..+.
T Consensus 163 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~~~ 219 (285)
T 1ozn_A 163 NRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA-----------------------LPTE 219 (285)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC-----------------------CCHH
T ss_pred CcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCc-----------------------CCHH
Confidence 55554444445555555555555555555445555555555555555555554 4444
Q ss_pred hhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCCC
Q 036342 300 EIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPRG 349 (596)
Q Consensus 300 ~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~ 349 (596)
.+..++.|+.|++++|.+....+... ...+++.+..+.|.+.+..|..
T Consensus 220 ~~~~l~~L~~L~l~~N~~~c~~~~~~--~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 220 ALAPLRALQYLRLNDNPWVCDCRARP--LWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHTTCTTCCEEECCSSCEECSGGGHH--HHHHHHHCCSEECCCBEEESGG
T ss_pred HcccCcccCEEeccCCCccCCCCcHH--HHHHHHhcccccCccccCCchH
Confidence 44555555555555555543322211 1123444445556666555543
No 78
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.1e-30 Score=264.09 Aligned_cols=246 Identities=20% Similarity=0.177 Sum_probs=144.1
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCccc-ccCCcccc-------CCCCCCEEecCCCcCcCCCCCcccc
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFS-GFIPSTFG-------NLRNLEQLGLDENYLTSSTPELSFL 129 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~~-------~l~~L~~L~l~~N~l~~~~~~~~~~ 129 (596)
.++|++|++++|.+ .+|..+... |++|+|++|.++ ..+|..+. ++++|++|++++|.+++..+.
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---- 113 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP---- 113 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC----
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH----
Confidence 45666777777766 455554443 666777777763 33444443 566777777777777653322
Q ss_pred ccC--CCCCCCCEEECcCCCCCccCCchhhhccc----ccccEEEccccccccccChhccCCCCCCEEEccCCcccCC--
Q 036342 130 SSL--SNCKSLTLIDLSNNPLDGILPKTSISNLS----RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGS-- 201 (596)
Q Consensus 130 ~~~--~~l~~L~~L~ls~N~l~~~~~~~~~~~l~----~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-- 201 (596)
.+ ..+++|++|++++|++++. |. .+..++ ++|++|++++|+|++..|..|..+++|++|++++|++.+.
T Consensus 114 -~~~~~~l~~L~~L~Ls~N~l~~~-~~-~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 190 (312)
T 1wwl_A 114 -PLLEATGPDLNILNLRNVSWATR-DA-WLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG 190 (312)
T ss_dssp -CSSSCCSCCCSEEEEESCBCSSS-SS-HHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH
T ss_pred -HHHHhcCCCccEEEccCCCCcch-hH-HHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH
Confidence 22 6677777777777777765 43 444442 4566666666666666666666667777777777766543
Q ss_pred CCccc--cCCCCCCeEEccCCcccc---cCccchhcCCCCcEEEccCCcCcccch-hhhccCCCCcEEEeCCCcccCCCc
Q 036342 202 IPITL--GKLRKLQRLNLEDNILEG---SIPDDICRLAELYRLELGSNKLYGSIP-ACFGNLASLRILSLGSNKLTSIPL 275 (596)
Q Consensus 202 ~p~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~ip~ 275 (596)
.|..+ ..+++|++|++++|.+++ .....+..+++|++|+|++|++++..| ..+..+++|++|+|++|.++.+|.
T Consensus 191 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~ 270 (312)
T 1wwl_A 191 LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPK 270 (312)
T ss_dssp HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCS
T ss_pred HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhh
Confidence 12222 566666666666666652 111223455666666666666665543 344455666666666666666665
Q ss_pred ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCc
Q 036342 276 TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 276 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~ 318 (596)
.+. ++|++|++++|++++. |. +..+++|+.|++++|+++
T Consensus 271 ~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 271 GLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred hcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 544 5556666666655554 22 555555555555555554
No 79
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=4.1e-31 Score=267.39 Aligned_cols=249 Identities=20% Similarity=0.213 Sum_probs=134.1
Q ss_pred CCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCc-cccCccC------ccCCCCccEEEccCCccccccCccc--
Q 036342 9 LQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLS-GSLSSIA------NVRLPNLEKLYLWGNNFSGTIPRFI-- 79 (596)
Q Consensus 9 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~------~~~l~~L~~L~L~~N~l~~~~~~~~-- 79 (596)
.++|++|++++|++ .+|..+... |++|+|++|.++ +.++... +..+++|++|+|++|++++..|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34455555555555 344433322 555555555552 1122110 0024455555555555555555543
Q ss_pred cCCCCCCEEEccCCcccccCCccccCC-----CCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCc
Q 036342 80 FNASKLSKLSLGMNSFSGFIPSTFGNL-----RNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPK 154 (596)
Q Consensus 80 ~~l~~L~~L~L~~N~i~~~~~~~~~~l-----~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~ 154 (596)
..+++|++|+|++|+|++. |..|.++ ++|++|++++|++++..+. .|.++++|++|++++|++.+.++
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~Ls~N~l~~~~~- 190 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCE-----QVRVFPALSTLDLSDNPELGERG- 190 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTT-----TCCCCSSCCEEECCSCTTCHHHH-
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHH-----HhccCCCCCEEECCCCCcCcchH-
Confidence 4555555555555555544 4444444 4555555555555444322 34455555555555555433210
Q ss_pred hhhhcccccccEEEccccccccccChhc--cCCCCCCEEEccCCcccCC---CCccccCCCCCCeEEccCCcccccCc-c
Q 036342 155 TSISNLSRSLEEFYMYNCNISGGIPEEI--SNLTNLVEIDLGGNKLNGS---IPITLGKLRKLQRLNLEDNILEGSIP-D 228 (596)
Q Consensus 155 ~~~~~l~~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~~-~ 228 (596)
.+..+ ..+++|++|++++|.+++. ....+..+++|++|++++|.+++..| .
T Consensus 191 -----------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 247 (312)
T 1wwl_A 191 -----------------------LISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAP 247 (312)
T ss_dssp -----------------------HHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCS
T ss_pred -----------------------HHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchh
Confidence 12222 5566666666666666621 12333456666666666666665543 3
Q ss_pred chhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCC
Q 036342 229 DICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 229 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~ 295 (596)
.+..+++|++|+|++|+++ .+|..+. ++|++|+|++|+|+++|. +..+++|++|++++|++++
T Consensus 248 ~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 248 SCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEEEEECTTCTTTC
T ss_pred hhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCChh-HhhCCCCCEEeccCCCCCC
Confidence 3445667777777777776 4555444 677777777777777765 6677777777777777765
No 80
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.2e-29 Score=255.02 Aligned_cols=234 Identities=22% Similarity=0.287 Sum_probs=139.2
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
.++++.|+|++|.++ .+|..++.+++|++|+|++|.|+ .+|..|.++++|++|+|++|.++.++ ..+.++++
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~~lp------~~l~~l~~ 151 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLRALP------ASIASLNR 151 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCCCCC------GGGGGCTT
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccccCc------HHHhcCcC
Confidence 356666666666666 55666666666666666666666 55666666666666666666666432 23566666
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
|++|++++|++.+.+|. .+.. . ..+..|.++++|++|++++|.++ .+|..+..+++|++|++
T Consensus 152 L~~L~L~~n~~~~~~p~-~~~~-------~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L 213 (328)
T 4fcg_A 152 LRELSIRACPELTELPE-PLAS-------T---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKI 213 (328)
T ss_dssp CCEEEEEEETTCCCCCS-CSEE-------E---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEE
T ss_pred CCEEECCCCCCccccCh-hHhh-------c---------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEc
Confidence 66666666666555544 1111 0 11223445556666666666665 45555566666666666
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccC-CCcccccccccceEEcccCCCCCc
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTS-IPLTFWNLKDILQLNFSSNFLTGP 296 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~ls~N~l~~~ 296 (596)
++|.++ .+|..+..+++|++|+|++|++.+.+|..|..+++|+.|+|++|++.+ +|..+..+++|++|++++|++.+.
T Consensus 214 ~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~ 292 (328)
T 4fcg_A 214 RNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSR 292 (328)
T ss_dssp ESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCC
T ss_pred cCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhh
Confidence 666665 344455566666666666666655666666666666666666655443 555566666666666666666666
Q ss_pred hhhhhccccccceEecCCCcCc
Q 036342 297 LLLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 297 ~~~~~~~l~~L~~L~ls~N~~~ 318 (596)
+|..+..++.|+.+++..|.+.
T Consensus 293 iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 293 LPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCGGGGGSCTTCEEECCGGGSC
T ss_pred ccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666655444
No 81
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=7e-29 Score=252.53 Aligned_cols=230 Identities=23% Similarity=0.299 Sum_probs=135.3
Q ss_pred CCCCCEEEccCCcCccccCc-cCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCE
Q 036342 33 VSTLKFLGLQNNSLSGSLSS-IANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQ 111 (596)
Q Consensus 33 l~~L~~L~Ls~N~l~~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 111 (596)
..+++.|+|++|.++ .+|. +.. +++|++|+|++|.++ .+|..+.++++|++|+|++|+++ .+|..|.++++|++
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~--l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~ 154 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFR--LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRE 154 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGG--GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCE
T ss_pred ccceeEEEccCCCch-hcChhhhh--CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCE
Confidence 467788888888877 4444 333 778888888888887 77777788888888888888887 55777888888888
Q ss_pred EecCCCcCcCCCCCc-c---ccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCC
Q 036342 112 LGLDENYLTSSTPEL-S---FLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTN 187 (596)
Q Consensus 112 L~l~~N~l~~~~~~~-~---~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~ 187 (596)
|++++|.+.+..+.. . +...|.++++|++|++++|.++ .+|. .+..+ ++|++|++++|.+++ +|..|..+++
T Consensus 155 L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~-~l~~l-~~L~~L~L~~N~l~~-l~~~l~~l~~ 230 (328)
T 4fcg_A 155 LSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPA-SIANL-QNLKSLKIRNSPLSA-LGPAIHHLPK 230 (328)
T ss_dssp EEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCG-GGGGC-TTCCEEEEESSCCCC-CCGGGGGCTT
T ss_pred EECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchH-hhcCC-CCCCEEEccCCCCCc-CchhhccCCC
Confidence 888886655433220 0 0011233555555555555555 3333 34444 345555555555553 3334555555
Q ss_pred CCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCC
Q 036342 188 LVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGS 267 (596)
Q Consensus 188 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 267 (596)
|++|++++|.+.+.+|..|..+++|++|++++|.+.+.+|..+..+++|+.|+|++|++.+.+|..++.+++|+.+++..
T Consensus 231 L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~ 310 (328)
T 4fcg_A 231 LEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPP 310 (328)
T ss_dssp CCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCG
T ss_pred CCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCH
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555554
Q ss_pred Cccc
Q 036342 268 NKLT 271 (596)
Q Consensus 268 N~l~ 271 (596)
|.+.
T Consensus 311 ~~~~ 314 (328)
T 4fcg_A 311 HLQA 314 (328)
T ss_dssp GGSC
T ss_pred HHHH
Confidence 4443
No 82
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=5.9e-28 Score=264.43 Aligned_cols=263 Identities=24% Similarity=0.264 Sum_probs=220.4
Q ss_pred CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEe
Q 036342 34 STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLG 113 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 113 (596)
.+++.|++++|.++ .+|... .++|++|+|++|+|+ .+|. .+++|++|+|++|+|+++.+ .+++|++|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~ 107 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCL---PAHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELS 107 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCC---CTTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEE
T ss_pred CCCcEEEecCCCcC-ccChhh---CCCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEE
Confidence 46999999999998 566533 279999999999999 5665 57899999999999996544 789999999
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEc
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDL 193 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 193 (596)
+++|.++.++. .+++|+.|++++|+++++ |. . + ++|++|++++|+|+++ |. .+.+|+.|++
T Consensus 108 Ls~N~l~~l~~---------~l~~L~~L~L~~N~l~~l-p~-~---l-~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L 168 (622)
T 3g06_A 108 IFSNPLTHLPA---------LPSGLCKLWIFGNQLTSL-PV-L---P-PGLQELSVSDNQLASL-PA---LPSELCKLWA 168 (622)
T ss_dssp ECSCCCCCCCC---------CCTTCCEEECCSSCCSCC-CC-C---C-TTCCEEECCSSCCSCC-CC---CCTTCCEEEC
T ss_pred CcCCcCCCCCC---------CCCCcCEEECCCCCCCcC-CC-C---C-CCCCEEECcCCcCCCc-CC---ccCCCCEEEC
Confidence 99999988643 467899999999999874 33 1 2 7899999999999964 43 3578999999
Q ss_pred cCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCC
Q 036342 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSI 273 (596)
Q Consensus 194 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i 273 (596)
++|.+++ +| ..+++|+.|++++|.|++ +|.. +++|+.|++++|.++. +|. .+++|+.|+|++|.|+.+
T Consensus 169 ~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~l 236 (622)
T 3g06_A 169 YNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTSL 236 (622)
T ss_dssp CSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSCC
T ss_pred CCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCcC
Confidence 9999996 44 457899999999999994 5543 4789999999999984 443 358999999999999999
Q ss_pred CcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC
Q 036342 274 PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR 348 (596)
Q Consensus 274 p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 348 (596)
| ..+++|+.|++++|.|+.... .+++|+.|++++|+++ .+|. .+..+++|+.|+|++|++++..|.
T Consensus 237 p---~~l~~L~~L~Ls~N~L~~lp~----~~~~L~~L~Ls~N~L~-~lp~-~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 237 P---VLPSELKELMVSGNRLTSLPM----LPSGLLSLSVYRNQLT-RLPE-SLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCC-SCCG-GGGGSCTTCEEECCSCCCCHHHHH
T ss_pred C---CCCCcCcEEECCCCCCCcCCc----ccccCcEEeCCCCCCC-cCCH-HHhhccccCEEEecCCCCCCcCHH
Confidence 9 456899999999999996443 5788999999999999 7787 467899999999999999987655
No 83
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.6e-29 Score=271.20 Aligned_cols=236 Identities=22% Similarity=0.203 Sum_probs=163.5
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
.++|++|+|++|.+++..|..|.++++|++|+|++|.|++..| |..+++|++|+|++|.+++++ ..++
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~----------~~~~ 100 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL----------VGPS 100 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE----------ECTT
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC----------CCCC
Confidence 3467777777777776666777777777777777777776555 777777777777777776532 1267
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCcccc-CCCCCCeEE
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLG-KLRKLQRLN 216 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 216 (596)
|+.|++++|.+++..+. .+ ++|++|+|++|.|++..|..|..+++|++|+|++|.+++..|..+. .+++|++|+
T Consensus 101 L~~L~L~~N~l~~~~~~----~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 101 IETLHAANNNISRVSCS----RG-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp CCEEECCSSCCCCEEEC----CC-SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred cCEEECcCCcCCCCCcc----cc-CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 77777777777765332 22 4677777777777777777777777777777777777776666665 677777777
Q ss_pred ccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCC-C
Q 036342 217 LEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLT-G 295 (596)
Q Consensus 217 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~-~ 295 (596)
|++|.|++. | ....+++|+.|+|++|.+++..| .+..+++|+.|+|++|.++++|..+..+++|+.|++++|++. +
T Consensus 176 Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 176 LQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cCCCccccc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 777777754 2 23346777777777777775444 377777777777777777777777777777777777777776 5
Q ss_pred chhhhhccccccceEecC
Q 036342 296 PLLLEIGNLKVLIGIDFS 313 (596)
Q Consensus 296 ~~~~~~~~l~~L~~L~ls 313 (596)
..|..+..++.|+.++++
T Consensus 253 ~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 253 TLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHhCCCCcEEecc
Confidence 555566666666555553
No 84
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.96 E-value=1.5e-29 Score=273.76 Aligned_cols=145 Identities=24% Similarity=0.381 Sum_probs=127.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhH---HHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSF---DVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~---~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|+..+.||+|+||+||+|. ... ..++.+++.++|||||+++++|.+++.+
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 4689999999999999999752 112 2346677888999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+|||||+||+|.+++...+ .+++..+..+++||+.||+||| .++||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 268 ylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999998764 6899999999999999999999 9999999999999999999999999999999764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
... ....+||+.||||
T Consensus 344 ~~~----~~t~~GTp~YmAP 359 (689)
T 3v5w_A 344 KKK----PHASVGTHGYMAP 359 (689)
T ss_dssp SCC----CCSCCSCGGGCCH
T ss_pred CCC----CCCccCCcCccCH
Confidence 322 3457999999998
No 85
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.96 E-value=2.2e-29 Score=261.17 Aligned_cols=147 Identities=30% Similarity=0.414 Sum_probs=125.9
Q ss_pred ccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeecc------CCe
Q 036342 445 DEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSN------EEF 495 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 495 (596)
++|+..+.||+|+||+||+|. +.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 579999999999999999852 356789999999999999999998754 357
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
+|+|||||+ |+|.+++...+ .+++.++..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999995 68999997654 6899999999999999999999 999999999999999999999999999999876
Q ss_pred CCCC--CccccccccccccccCC
Q 036342 576 TGED--QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~--~~~~~~~~~gt~~y~aP 596 (596)
.... ........+||++||||
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~AP 231 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAP 231 (398)
T ss_dssp -------CCCCCSSCCCCTTCCH
T ss_pred ccCccccccccccceeChHhcCH
Confidence 4321 11223457999999998
No 86
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.96 E-value=3.4e-29 Score=256.97 Aligned_cols=131 Identities=22% Similarity=0.322 Sum_probs=117.8
Q ss_pred HHHHhcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCe
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEF 495 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~ 495 (596)
.+....++|+..+.||+|+||+||+|. ..+.+|+++++++ +|||||++++++.+++.
T Consensus 15 ~~p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp HSGGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred hcCCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 334456789999999999999999862 2467899999998 69999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC-CcEEEeccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN-MVAHLSDFSIAKL 574 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~-~~~kl~dfGla~~ 574 (596)
.|+|||||++|+|.++++ .+++.++..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.
T Consensus 95 ~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~ 167 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQG 167 (361)
T ss_dssp EEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcc
Confidence 999999999999999984 3789999999999999999999 9999999999999999876 8999999999986
Q ss_pred cC
Q 036342 575 LT 576 (596)
Q Consensus 575 ~~ 576 (596)
..
T Consensus 168 ~~ 169 (361)
T 4f9c_A 168 TH 169 (361)
T ss_dssp CT
T ss_pred cC
Confidence 53
No 87
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.95 E-value=1.8e-28 Score=266.73 Aligned_cols=147 Identities=22% Similarity=0.387 Sum_probs=132.0
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|+..+.||+|+||+||+|. +.+.+|+++|++++|||||+++++|.+++..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 4689999999999999999852 4577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC--CcEEEeccccccccCCCCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN--MVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~--~~~kl~dfGla~~~~~~~~ 580 (596)
|+||+|.+++......+++.++..++.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999776667899999999999999999999 8999999999999999854 899999999999875322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.....+||+.||||
T Consensus 312 --~~~~~~GT~~y~AP 325 (573)
T 3uto_A 312 --SVKVTTGTAEFAAP 325 (573)
T ss_dssp --EEEEECSSGGGCCH
T ss_pred --ceeeeEECccccCH
Confidence 23457899999998
No 88
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=1.2e-26 Score=230.16 Aligned_cols=225 Identities=24% Similarity=0.242 Sum_probs=165.0
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccC
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGM 92 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 92 (596)
..++.++.+++ .+|..+. ++|++|+|++|++++ ++...+..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRH-LGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCE-ECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccc-cCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 35666666665 4555442 568888888888874 3333444577888888888888776667778888888888888
Q ss_pred CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCcc-CCchhhhcccccccEEEccc
Q 036342 93 NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGI-LPKTSISNLSRSLEEFYMYN 171 (596)
Q Consensus 93 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~~l~~~L~~L~l~~ 171 (596)
|.+++..++.|.++++|++|++++|.++.+.+. .+.++++|++|++++|.+++. +|. .+..+ ++|++|++++
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~l~~-~~~~l-~~L~~L~Ls~ 158 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENF-----PIGHLKTLKELNVAHNLIQSFKLPE-YFSNL-TNLEHLDLSS 158 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTC-----CCTTCTTCCEEECCSSCCCCCCCCG-GGGGC-TTCCEEECCS
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCch-----hcccCCCCCEEECcCCccceecCch-hhccC-CCCCEEECCC
Confidence 888877777788888888888888887776543 377778888888888888764 244 56666 6788888888
Q ss_pred cccccccChhccCCCCCC----EEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 172 CNISGGIPEEISNLTNLV----EIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 172 n~l~~~~~~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
|++++..+..|..+++|+ .|++++|.+++..+..+.. .+|+.|++++|.+++..+..+..+++|+.|++++|++.
T Consensus 159 N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 159 NKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 888877777777666666 7888888888766665554 47888888888888665556677888888888888887
Q ss_pred cc
Q 036342 248 GS 249 (596)
Q Consensus 248 ~~ 249 (596)
+.
T Consensus 238 c~ 239 (276)
T 2z62_A 238 CS 239 (276)
T ss_dssp CC
T ss_pred cc
Confidence 43
No 89
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=2.6e-26 Score=227.86 Aligned_cols=208 Identities=21% Similarity=0.296 Sum_probs=118.1
Q ss_pred CCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccccc
Q 036342 84 KLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRS 163 (596)
Q Consensus 84 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~ 163 (596)
+|++|+|++|+|+++.+..|.++++|++|++++|.++.+.+. .|.++++|++|++++|.++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~-------------- 89 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDG-----AYQSLSHLSTLILTGNPIQ-------------- 89 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTT-----TTTTCTTCCEEECTTCCCC--------------
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHH-----HccCCcCCCEEECCCCccC--------------
Confidence 455555555555555554555555555555555555443322 2444444444444444443
Q ss_pred ccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCccccc-CccchhcCCCCcEEEcc
Q 036342 164 LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS-IPDDICRLAELYRLELG 242 (596)
Q Consensus 164 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~Ls 242 (596)
+..+..|.++++|++|++++|.+.+..+..+..+++|++|++++|.+++. +|..+..+++|+.|+++
T Consensus 90 ------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls 157 (276)
T 2z62_A 90 ------------SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLS 157 (276)
T ss_dssp ------------EECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECC
T ss_pred ------------ccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECC
Confidence 33344555666667777777766666555666677777777777776642 46666677777777777
Q ss_pred CCcCcccchhhhccCCCCc----EEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCc
Q 036342 243 SNKLYGSIPACFGNLASLR----ILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~ 318 (596)
+|++++..+..+..+++|+ .|++++|.++.++.......+|++|+ +++|+++
T Consensus 158 ~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~------------------------L~~n~l~ 213 (276)
T 2z62_A 158 SNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELA------------------------LDTNQLK 213 (276)
T ss_dssp SSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEE------------------------CCSSCCS
T ss_pred CCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEE------------------------CCCCcee
Confidence 7777666666666666555 56666666666554444333444444 4444444
Q ss_pred ccCChhhhccCCCCCeEECCCCcccccCC
Q 036342 319 GVIPREIGEKLSYLEDLNLSFNKLKGEIP 347 (596)
Q Consensus 319 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 347 (596)
+ +|...+..+++|+.|++++|++++.+|
T Consensus 214 ~-~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 214 S-VPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp C-CCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred e-cCHhHhcccccccEEEccCCcccccCC
Confidence 2 333344455566666666666665544
No 90
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.94 E-value=9.4e-28 Score=252.82 Aligned_cols=157 Identities=21% Similarity=0.306 Sum_probs=138.0
Q ss_pred CHHHHHHhcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeec
Q 036342 436 SYLELCRATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCS 491 (596)
Q Consensus 436 ~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~ 491 (596)
.+.++....++|+..+.||+|+||+||++. +.+..|..+++.++|||||+++++|.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 345556678899999999999999999852 12778999999999999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
+++..|+|||||++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGl 221 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGS 221 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhh
Confidence 999999999999999999999876567899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+...... .......+||++||||
T Consensus 222 a~~~~~~~-~~~~~~~~GT~~Y~AP 245 (437)
T 4aw2_A 222 CLKLMEDG-TVQSSVAVGTPDYISP 245 (437)
T ss_dssp CEECCTTS-CEECCSCCSCGGGCCH
T ss_pred hhhcccCC-CcccccccCCcCeeCh
Confidence 98764332 2223446899999998
No 91
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.94 E-value=2.5e-28 Score=269.25 Aligned_cols=355 Identities=15% Similarity=0.109 Sum_probs=240.8
Q ss_pred CCCCCCEEECCCCCCccccchhhhCC--CCCCEEEccCCcC-cc-ccCccCccCCCCccEEEccCCccccc----cCccc
Q 036342 8 NLQNLEELQLGQNKLIGTVPAAIFNV--STLKFLGLQNNSL-SG-SLSSIANVRLPNLEKLYLWGNNFSGT----IPRFI 79 (596)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l-~~-~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~ 79 (596)
.+++|++|+|++|.+++..+..+... .+|++|+|++|.- +. .++... ..+++|++|+|++|.+++. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~-~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIV-THCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHH-HHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHH-hhCCCCCEEECccccccCcchhHHHHHH
Confidence 67889999999998877666666553 4488888888762 10 111111 1367888888888887654 33345
Q ss_pred cCCCCCCEEEccCCcccc----cCCccccCCCCCCEEecCCCcCcCCCCC---------------------ccccccCCC
Q 036342 80 FNASKLSKLSLGMNSFSG----FIPSTFGNLRNLEQLGLDENYLTSSTPE---------------------LSFLSSLSN 134 (596)
Q Consensus 80 ~~l~~L~~L~L~~N~i~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~---------------------~~~~~~~~~ 134 (596)
.++++|++|+|++|.+++ ..+..+.++++|++|++++|.+.+++.. ......+..
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 567788888888888763 3344456778888888888776542210 011223455
Q ss_pred CCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccC-hhccCCCCCCEEEccCCcccCCCCccccCCCCCC
Q 036342 135 CKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIP-EEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQ 213 (596)
Q Consensus 135 l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 213 (596)
+++|+.|+++++... .+|. .+..+ ++|++|++++|.+++... ..+..+++|++|+++++...+.++..+..+++|+
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~-~~~~~-~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPI-LFPFA-AQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGG-GGGGG-GGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCC
T ss_pred cccccccCccccchh-HHHH-HHhhc-CCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCC
Confidence 566666666654322 2222 34444 689999999999875544 4467889999999984333333444456788999
Q ss_pred eEEcc-----------CCccccc-CccchhcCCCCcEEEccCCcCcccchhhhcc-CCCCcEEEeC----CCcccCCCc-
Q 036342 214 RLNLE-----------DNILEGS-IPDDICRLAELYRLELGSNKLYGSIPACFGN-LASLRILSLG----SNKLTSIPL- 275 (596)
Q Consensus 214 ~L~L~-----------~N~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~ip~- 275 (596)
+|+++ .|.+++. ++..+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|.+++.|.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 99999 3666543 2223456889999999999998777777765 8899999996 778887543
Q ss_pred -----ccccccccceEEcccC--CCCCchhhhhcc-ccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCC
Q 036342 276 -----TFWNLKDILQLNFSSN--FLTGPLLLEIGN-LKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIP 347 (596)
Q Consensus 276 -----~~~~l~~L~~L~ls~N--~l~~~~~~~~~~-l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 347 (596)
.+..+++|+.|+++++ .+++..+..+.. +++|+.|++++|++++.........+++|+.|++++|++++...
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 2566889999999753 477666655554 78899999999998753333355678899999999999865422
Q ss_pred C-C-CCCCCCCcccccccccc
Q 036342 348 R-G-GSFGNFSAESFEGNELL 366 (596)
Q Consensus 348 ~-~-~~~~~l~~l~~~~N~~~ 366 (596)
. . ..+++++.+++++|++.
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCC
T ss_pred HHHHHhcCccCeeECcCCcCC
Confidence 2 1 34778899999999853
No 92
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=2.6e-25 Score=219.88 Aligned_cols=203 Identities=26% Similarity=0.301 Sum_probs=115.2
Q ss_pred CCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEe
Q 036342 34 STLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLG 113 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 113 (596)
.+++.+++++|.++. +|... .++|++|+|++|+++...+.+|.++++|++|+|++|+|+.+.+..|.++++|++|+
T Consensus 16 ~~~~~l~~~~~~l~~-ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 16 NNKNSVDCSSKKLTA-IPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp TTTTEEECTTSCCSS-CCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCCEEEccCCCCCc-cCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 356677777777763 43311 24566777777766655555666666666666666666665555566666666666
Q ss_pred cCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEc
Q 036342 114 LDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDL 193 (596)
Q Consensus 114 l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 193 (596)
+++|.++.+++. .|.++++|++|++++|.++ +..+..|..+++|++|++
T Consensus 92 l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~--------------------------~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 92 VTDNKLQALPIG-----VFDQLVNLAELRLDRNQLK--------------------------SLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp CCSSCCCCCCTT-----TTTTCSSCCEEECCSSCCC--------------------------CCCTTTTTTCTTCCEEEC
T ss_pred CCCCcCCcCCHh-----HcccccCCCEEECCCCccC--------------------------eeCHHHhCcCcCCCEEEC
Confidence 666666554332 2444444444444444443 333444555566666666
Q ss_pred cCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 194 GGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 194 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 666666555555555666666666666655444444555555555555555555444445555555555555555544
No 93
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3e-25 Score=219.39 Aligned_cols=203 Identities=30% Similarity=0.369 Sum_probs=151.9
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEE
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLS 89 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 89 (596)
.+.+++++++++++ .+|..+. ++|++|+|++|+++ .++...+..+++|++|+|++|+++...+..|.++++|++|+
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~ 91 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLS-SLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLW 91 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCS-CCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEE
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCC-eeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEE
Confidence 35789999999998 4666553 68999999999998 45555566799999999999999977777788999999999
Q ss_pred ccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEc
Q 036342 90 LGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYM 169 (596)
Q Consensus 90 L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l 169 (596)
|++|+++++.+..|.++++|++|++++|.++.+++. .|.++++|++|+|++|.+++..+. .+..+ ++|++|++
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~Ls~n~l~~~~~~-~~~~l-~~L~~L~L 164 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPR-----VFDSLTKLTYLSLGYNELQSLPKG-VFDKL-TSLKELRL 164 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTT-TTTTC-TTCCEEEC
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHH-----HhCcCcCCCEEECCCCcCCccCHh-HccCC-cccceeEe
Confidence 999999999999999999999999999999987654 478888888888888888754332 34444 45555555
Q ss_pred cccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCccc
Q 036342 170 YNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 170 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 555555555555555555555555555555544444555555555555555544
No 94
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.94 E-value=3.6e-26 Score=226.32 Aligned_cols=225 Identities=23% Similarity=0.271 Sum_probs=150.5
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccC
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGM 92 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 92 (596)
..+++..+.+.+.. ....+++|+.|++++|.++ .++.+.. +++|++|+|++|.+++. ..+..+++|++|+|++
T Consensus 22 ~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~-~~~~l~~--l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 94 (272)
T 3rfs_A 22 IKANLKKKSVTDAV--TQNELNSIDQIIANNSDIK-SVQGIQY--LPNVRYLALGGNKLHDI--SALKELTNLTYLILTG 94 (272)
T ss_dssp HHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCC-CCTTGGG--CTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTT
T ss_pred HHHHhcCccccccc--ccccccceeeeeeCCCCcc-ccccccc--CCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCC
Confidence 34455555555432 3445677777888777776 4544443 77778888887777742 3677777777788877
Q ss_pred CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcccc
Q 036342 93 NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNC 172 (596)
Q Consensus 93 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n 172 (596)
|.|+++.+..|.++++|++|++++|.++++++. .|.++++|++|++++|.+++..+. .+..+ ++|++|++++|
T Consensus 95 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~-~~~~l-~~L~~L~l~~n 167 (272)
T 3rfs_A 95 NQLQSLPNGVFDKLTNLKELVLVENQLQSLPDG-----VFDKLTNLTYLNLAHNQLQSLPKG-VFDKL-TNLTELDLSYN 167 (272)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTT-TTTTC-TTCCEEECCSS
T ss_pred CccCccChhHhcCCcCCCEEECCCCcCCccCHH-----HhccCCCCCEEECCCCccCccCHH-HhccC-ccCCEEECCCC
Confidence 777777777777777777777777777765543 366777777777777777655433 44555 56777777777
Q ss_pred ccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchh
Q 036342 173 NISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPA 252 (596)
Q Consensus 173 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 252 (596)
++++..+..|..+++|++|++++|.+++..+..|..+++|++|++++|.+.+. +++|+.|+++.|+++|.+|.
T Consensus 168 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~ 240 (272)
T 3rfs_A 168 QLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRN 240 (272)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBC
T ss_pred CcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccC
Confidence 77766666666777777777777777766666666777777777777766533 33566666777777666666
Q ss_pred hhccCC
Q 036342 253 CFGNLA 258 (596)
Q Consensus 253 ~~~~l~ 258 (596)
.++.++
T Consensus 241 ~~~~~~ 246 (272)
T 3rfs_A 241 SAGSVA 246 (272)
T ss_dssp TTSCBC
T ss_pred cccccC
Confidence 665543
No 95
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.6e-25 Score=221.96 Aligned_cols=200 Identities=25% Similarity=0.230 Sum_probs=127.0
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
+++|+++++++|.++ .+|..+. +++++|+|++|.|++..+..|.++++|++|++++|.++.++. ...+++
T Consensus 9 l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------~~~l~~ 78 (290)
T 1p9a_G 9 VASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-------DGTLPV 78 (290)
T ss_dssp STTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-------CSCCTT
T ss_pred cCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-------CCCCCc
Confidence 445555555555555 3343332 455666666666665555566666666666666665554321 234455
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
|++|++++|+++. +|..+..+++|++|++++|++++..|..|..+++|++|+|
T Consensus 79 L~~L~Ls~N~l~~---------------------------l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 79 LGTLDLSHNQLQS---------------------------LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp CCEEECCSSCCSS---------------------------CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCEEECCCCcCCc---------------------------CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 5555555555431 2334455666666677777666666666677777777777
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCC
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~ 294 (596)
++|.|++..+..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+++.+|..++.+.+|+.+++++|++.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCcc
Confidence 77777655555566677777777777777766666677778888888888888888877777777777777777765
No 96
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=6.6e-27 Score=257.82 Aligned_cols=329 Identities=13% Similarity=0.023 Sum_probs=218.2
Q ss_pred CCCCCCEEECCCCCCccc----cchhhhCCCCCCEEEccCCcCcc----ccCccCccCCCCccEEEccCCccccccCccc
Q 036342 8 NLQNLEELQLGQNKLIGT----VPAAIFNVSTLKFLGLQNNSLSG----SLSSIANVRLPNLEKLYLWGNNFSGTIPRFI 79 (596)
Q Consensus 8 ~l~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~----~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 79 (596)
++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++.. +..+++|+.|+|++|.+.+ +|..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~-~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETI-ARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHH-HHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHH-HhhCCCCcEEeccCccHHH-HHHHH
Confidence 445555666655555443 22233345555666665555541 11111 1124556666666655553 44555
Q ss_pred cCCCCCCEEEccCCccc---ccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchh
Q 036342 80 FNASKLSKLSLGMNSFS---GFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTS 156 (596)
Q Consensus 80 ~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~ 156 (596)
.++++|++|+++..... ...+..+..+++|+.|+++++.... ++..+..+++|++|++++|.+++......
T Consensus 240 ~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~------l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~ 313 (592)
T 3ogk_B 240 KAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNE------MPILFPFAAQIRKLDLLYALLETEDHCTL 313 (592)
T ss_dssp HHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTT------GGGGGGGGGGCCEEEETTCCCCHHHHHHH
T ss_pred hhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchhH------HHHHHhhcCCCcEEecCCCcCCHHHHHHH
Confidence 55556666665542221 1223344555566666665543222 33456788999999999999765433223
Q ss_pred hhcccccccEEEccccccccccChhccCCCCCCEEEcc-----------CCcccCCC-CccccCCCCCCeEEccCCcccc
Q 036342 157 ISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLG-----------GNKLNGSI-PITLGKLRKLQRLNLEDNILEG 224 (596)
Q Consensus 157 ~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 224 (596)
+..+ ++|++|+++++-..+.++..+..+++|++|+++ .|.+++.. +..+..+++|++|+++.|.+++
T Consensus 314 ~~~~-~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~ 392 (592)
T 3ogk_B 314 IQKC-PNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITN 392 (592)
T ss_dssp HTTC-TTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCH
T ss_pred HHhC-cCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccH
Confidence 4555 789999999443334445555778999999999 46666432 2234568999999999999987
Q ss_pred cCccchhc-CCCCcEEEcc----CCcCccc-----chhhhccCCCCcEEEeCCCc--ccC-CCcccc-cccccceEEccc
Q 036342 225 SIPDDICR-LAELYRLELG----SNKLYGS-----IPACFGNLASLRILSLGSNK--LTS-IPLTFW-NLKDILQLNFSS 290 (596)
Q Consensus 225 ~~~~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~--l~~-ip~~~~-~l~~L~~L~ls~ 290 (596)
..+..+.. +++|+.|+++ .|++++. ++..+.++++|+.|+|++|. ++. .+..+. .+++|++|++++
T Consensus 393 ~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~ 472 (592)
T 3ogk_B 393 ESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGY 472 (592)
T ss_dssp HHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECS
T ss_pred HHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccC
Confidence 77777765 8999999996 7788764 55567889999999998543 554 223333 478999999999
Q ss_pred CCCCCc-hhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCccccc
Q 036342 291 NFLTGP-LLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGE 345 (596)
Q Consensus 291 N~l~~~-~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 345 (596)
|.+++. .+..+..+++|+.|++++|.+++.........+++|+.|++++|++++.
T Consensus 473 n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 473 VGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp CCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 999874 4555678999999999999987554444556799999999999998754
No 97
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.93 E-value=2.3e-26 Score=240.51 Aligned_cols=156 Identities=24% Similarity=0.341 Sum_probs=136.3
Q ss_pred HHHHHHhcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeecc
Q 036342 437 YLELCRATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSN 492 (596)
Q Consensus 437 ~~~~~~~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~ 492 (596)
+.+.....++|+..+.||+|+||.||++. +.+..|..++++++|||||++++++.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 34555567899999999999999999752 236789999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccc
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla 572 (596)
++..|+||||+++|+|.+++...+..+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999999999876557899999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... .......+||+.|+||
T Consensus 210 ~~~~~~~-~~~~~~~~Gt~~Y~AP 232 (412)
T 2vd5_A 210 LKLRADG-TVRSLVAVGTPDYLSP 232 (412)
T ss_dssp EECCTTS-CEECSSCCSCGGGCCH
T ss_pred eeccCCC-ccccceeccccCcCCH
Confidence 8764322 2223346899999998
No 98
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.93 E-value=2.2e-26 Score=240.57 Aligned_cols=153 Identities=25% Similarity=0.362 Sum_probs=134.0
Q ss_pred HHHHHhcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccC
Q 036342 438 LELCRATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE 493 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~ 493 (596)
.++....++|+..+.||+|+||.||++. +.+..|+.+++.++|||||+++++|.++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3445567899999999999999999752 2367899999999999999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccc
Q 036342 494 EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573 (596)
Q Consensus 494 ~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~ 573 (596)
+..|+|||||++|+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 9999999999999999999765 4789999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCC
Q 036342 574 LLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
...... .......+||+.|+||
T Consensus 217 ~~~~~~-~~~~~~~~gt~~Y~AP 238 (410)
T 3v8s_A 217 KMNKEG-MVRCDTAVGTPDYISP 238 (410)
T ss_dssp ECCTTS-EEECCSCCSCGGGCCH
T ss_pred eeccCC-cccccCCcCCccccCH
Confidence 764322 1223457899999998
No 99
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.93 E-value=6.5e-27 Score=241.64 Aligned_cols=260 Identities=19% Similarity=0.186 Sum_probs=151.3
Q ss_pred EEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCc---cCccCCC-CccEEEccCCccccccCccccCC-----CC
Q 036342 14 ELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSS---IANVRLP-NLEKLYLWGNNFSGTIPRFIFNA-----SK 84 (596)
Q Consensus 14 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~---~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 84 (596)
++++++|++++.+|..+...++|++|||++|.+++.... ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 467788888877777766666788888888887643221 2233455 67777777777776656666554 67
Q ss_pred CCEEEccCCcccccCCccccC----C-CCCCEEecCCCcCcCCCCCccccccCCC-CCCCCEEECcCCCCCccCCchhhh
Q 036342 85 LSKLSLGMNSFSGFIPSTFGN----L-RNLEQLGLDENYLTSSTPELSFLSSLSN-CKSLTLIDLSNNPLDGILPKTSIS 158 (596)
Q Consensus 85 L~~L~L~~N~i~~~~~~~~~~----l-~~L~~L~l~~N~l~~~~~~~~~~~~~~~-l~~L~~L~ls~N~l~~~~~~~~~~ 158 (596)
|++|+|++|.|++..+..+.. + ++|++|++++|.++...... +...+.. .++|++|+|++|.+++....
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~~L~~L~Ls~N~l~~~~~~---- 156 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSE-FKQAFSNLPASITSLNLRGNDLGIKSSD---- 156 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHH-HHHHHTTSCTTCCEEECTTSCGGGSCHH----
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHH-HHHHHHhCCCceeEEEccCCcCCHHHHH----
Confidence 777777777777655554333 2 56666666666665533210 1111222 23455555555544432111
Q ss_pred cccccccEEEccccccccccChhccCCC-CCCEEEccCCcccCCCCcccc----CC-CCCCeEEccCCccccc----Ccc
Q 036342 159 NLSRSLEEFYMYNCNISGGIPEEISNLT-NLVEIDLGGNKLNGSIPITLG----KL-RKLQRLNLEDNILEGS----IPD 228 (596)
Q Consensus 159 ~l~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~----~~~ 228 (596)
.++..+..++ +|++|+|++|.+++..+..+. .+ ++|++|+|++|.|++. ++.
T Consensus 157 ------------------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 157 ------------------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp ------------------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred ------------------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 2223334444 677777777777665554333 33 4777777777777642 344
Q ss_pred chhcC-CCCcEEEccCCcCcccch----hhhccCCCCcEEEeCCCcccCCC--------cccccccccceEEcccCCCCC
Q 036342 229 DICRL-AELYRLELGSNKLYGSIP----ACFGNLASLRILSLGSNKLTSIP--------LTFWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 229 ~~~~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~ip--------~~~~~l~~L~~L~ls~N~l~~ 295 (596)
.+... ++|+.|+|++|.+++..+ ..+..+++|+.|+|++|.+..++ ..+..+++|+.|++++|++..
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 44443 477777777777765544 23355677777777777754433 234455566666666666654
Q ss_pred c
Q 036342 296 P 296 (596)
Q Consensus 296 ~ 296 (596)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 4
No 100
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=8.9e-25 Score=218.11 Aligned_cols=201 Identities=22% Similarity=0.206 Sum_probs=104.8
Q ss_pred hCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCC
Q 036342 31 FNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLE 110 (596)
Q Consensus 31 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 110 (596)
..+++++++++++|.++ .+|... .++|+.|+|++|.+++..+..|.++++|++|+|++|.|+++.+. ..+++|+
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred cccCCccEEECCCCCCC-cCCCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 34555666666666665 233211 24566666666666666666666666777777777776655432 5667777
Q ss_pred EEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCE
Q 036342 111 QLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVE 190 (596)
Q Consensus 111 ~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 190 (596)
+|++++|+++.++. .+.++++|+.|++++|+|++..+. .+..+ ++|++|+|++|+|++..+..|..+++|+.
T Consensus 81 ~L~Ls~N~l~~l~~------~~~~l~~L~~L~l~~N~l~~l~~~-~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 152 (290)
T 1p9a_G 81 TLDLSHNQLQSLPL------LGQTLPALTVLDVSFNRLTSLPLG-ALRGL-GELQELYLKGNELKTLPPGLLTPTPKLEK 152 (290)
T ss_dssp EEECCSSCCSSCCC------CTTTCTTCCEEECCSSCCCCCCSS-TTTTC-TTCCEEECTTSCCCCCCTTTTTTCTTCCE
T ss_pred EEECCCCcCCcCch------hhccCCCCCEEECCCCcCcccCHH-HHcCC-CCCCEEECCCCCCCccChhhcccccCCCE
Confidence 77777777765432 355666666666666666543222 23333 33444444444444333344444445555
Q ss_pred EEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcC
Q 036342 191 IDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKL 246 (596)
Q Consensus 191 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 246 (596)
|+|++|++++..+..|..+++|++|+|++|+|+ .+|..+..+.+|+.++|++|.+
T Consensus 153 L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~ 207 (290)
T 1p9a_G 153 LSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPW 207 (290)
T ss_dssp EECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCB
T ss_pred EECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCc
Confidence 555555554444444444444444444444444 3344333333444444444433
No 101
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=2.3e-25 Score=220.52 Aligned_cols=211 Identities=22% Similarity=0.284 Sum_probs=186.7
Q ss_pred cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCC
Q 036342 6 IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKL 85 (596)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (596)
...+++|++|++++|.++.. ..+..+++|++|+|++|++++ ++.+. .+++|++|+|++|.+++..+..|.++++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~~~l~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 111 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-ISALK--ELTNLTYLILTGNQLQSLPNGVFDKLTNL 111 (272)
T ss_dssp HHHHTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-CGGGT--TCTTCCEEECTTSCCCCCCTTTTTTCTTC
T ss_pred cccccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-chhhc--CCCCCCEEECCCCccCccChhHhcCCcCC
Confidence 45678999999999998743 458889999999999999985 55443 58999999999999998888889999999
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccccccc
Q 036342 86 SKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165 (596)
Q Consensus 86 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~ 165 (596)
++|+|++|++++..+..|.++++|++|++++|.++++++. .+.++++|+.|++++|++++..+. .+..+ ++|+
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l-~~L~ 184 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKG-----VFDKLTNLTELDLSYNQLQSLPEG-VFDKL-TQLK 184 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTT-TTTTC-TTCC
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHH-----HhccCccCCEEECCCCCcCccCHH-HhcCC-ccCC
Confidence 9999999999999999999999999999999999987664 478999999999999999976554 56777 7899
Q ss_pred EEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCC
Q 036342 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAE 235 (596)
Q Consensus 166 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 235 (596)
+|++++|++++..+..|..+++|++|++++|.+.+. +++|+.|+++.|.++|.+|..++.++.
T Consensus 185 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 185 DLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp EEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred EEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 999999999999888899999999999999998753 567999999999999999998877654
No 102
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.93 E-value=1e-25 Score=227.40 Aligned_cols=150 Identities=27% Similarity=0.482 Sum_probs=130.9
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|...+.||+|+||.||++. +.+.+|++++++++||||+++++++.+++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 4688999999999999999852 4578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++|+|.++++.....+++.++..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999986667899999999999999999999 8999999999999999999999999999998764322110
Q ss_pred ------------ccccccccccccCC
Q 036342 583 ------------TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ------------~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAP 191 (310)
T ss_dssp --------------CCCCSCGGGCCH
T ss_pred cccccccccccccccccCCCcceeCH
Confidence 01145799999998
No 103
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.92 E-value=5.7e-26 Score=230.93 Aligned_cols=147 Identities=27% Similarity=0.404 Sum_probs=131.4
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 45689999999999999999752 3467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++...+ .+++..+..++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 168 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG 168 (328)
T ss_dssp ECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred EECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence 99999999999997754 5889999999999999999999 8999999999999999999999999999998764322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.....+||++|+||
T Consensus 169 ---~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 169 ---KLDAFCGAPPYAAP 182 (328)
T ss_dssp ---GGGTTSSSGGGCCH
T ss_pred ---ccccccCCcceeCc
Confidence 23456899999998
No 104
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.92 E-value=1.4e-25 Score=232.26 Aligned_cols=150 Identities=29% Similarity=0.478 Sum_probs=130.8
Q ss_pred cccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhc-CCCccceeeeeeccC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNE 493 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~ 493 (596)
.++|...+.||+|+||.||+|. +.+.+|+.+++++ +|||||+++++|..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 4689999999999999999641 3577899999999 899999999999999
Q ss_pred CeeEEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee
Q 036342 494 EFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558 (596)
Q Consensus 494 ~~~~lV~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl 558 (596)
+..|+||||+++|+|.+++.... ..+++.+++.++.|+++|+.||| ..+|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 99999999999999999998653 24788999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 559 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 559 ~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.++.+||+|||+++...............+|+.|+||
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 274 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence 99999999999999876543322233445688999998
No 105
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.92 E-value=1.2e-25 Score=232.57 Aligned_cols=151 Identities=19% Similarity=0.240 Sum_probs=131.4
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcC---CCccceeeeeeccCCee
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIR---HRNLIKVISSCSNEEFK 496 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~ 496 (596)
..++|...+.||+|+||.||+|. ..+..|++++++++ |+||+++++++..++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~ 142 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGS 142 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCE
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCc
Confidence 45789999999999999999981 35678888888887 99999999999999999
Q ss_pred EEEEecCCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC-----------C
Q 036342 497 ALVLEYMPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD-----------N 561 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~-----------~ 561 (596)
|+|||||++|+|.+++.. ....+++..++.++.|+++||+||| ..+|+||||||+|||++. +
T Consensus 143 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 143 VLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp EEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------C
T ss_pred EEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccccc
Confidence 999999999999999975 2346899999999999999999999 899999999999999998 8
Q ss_pred CcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 562 MVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 562 ~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.+||+|||+|+.+............+||++||||
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 254 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV 254 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence 99999999999765422223334557899999998
No 106
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.92 E-value=1.5e-25 Score=232.14 Aligned_cols=146 Identities=30% Similarity=0.437 Sum_probs=130.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++|||||++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4689999999999999999741 3567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 94 ~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 99999999999998653 5889999999999999999999 8999999999999999999999999999998764322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 170 ---~~~~~~gt~~Y~aP 183 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAP 183 (384)
T ss_dssp ---CBCCCCSCGGGCCG
T ss_pred ---ceeccCCCccccCC
Confidence 23457899999998
No 107
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.92 E-value=1.6e-25 Score=228.44 Aligned_cols=147 Identities=27% Similarity=0.350 Sum_probs=129.9
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++...+..|+|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 4689999999999999999742 2467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 99999999999997654 5789999999999999999999 889999999999999999999999999999864322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.......+||+.|+||
T Consensus 159 -~~~~~~~~gt~~y~aP 174 (337)
T 1o6l_A 159 -GATMKTFCGTPEYLAP 174 (337)
T ss_dssp -TCCBCCCEECGGGCCG
T ss_pred -CCcccccccChhhCCh
Confidence 1223457899999998
No 108
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.92 E-value=1.7e-25 Score=227.46 Aligned_cols=166 Identities=37% Similarity=0.562 Sum_probs=143.8
Q ss_pred ccccccCHHHHHHhcccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeee
Q 036342 430 ATWRTFSYLELCRATDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVIS 488 (596)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~ 488 (596)
.....+++.++....++|+..+.||+|+||.||+|. ..+.+|+.++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 345678999999999999999999999999999852 25789999999999999999999
Q ss_pred eeccCCeeEEEEecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEE
Q 036342 489 SCSNEEFKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAH 565 (596)
Q Consensus 489 ~~~~~~~~~lV~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~k 565 (596)
++..++..++||||+++|+|.+++.... ..+++..+..++.|++.|+.|||..+..+|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 9999999999999999999999998653 3489999999999999999999933333999999999999999999999
Q ss_pred EeccccccccCCCCCccccccccccccccCC
Q 036342 566 LSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 566 l~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+|||+++...... ........||+.|+||
T Consensus 175 l~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aP 204 (326)
T 3uim_A 175 VGDFGLAKLMDYKD-THVTTAVRGTIGHIAP 204 (326)
T ss_dssp ECCCSSCEECCSSS-SCEECCCCSCGGGCCH
T ss_pred eccCccccccCccc-ccccccccCCcCccCH
Confidence 99999998764322 2223445699999998
No 109
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.92 E-value=8.9e-26 Score=229.12 Aligned_cols=159 Identities=36% Similarity=0.612 Sum_probs=136.8
Q ss_pred cCHHHHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCC
Q 036342 435 FSYLELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE 494 (596)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 494 (596)
+.+.++...+++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 3444556678899999999999999999852 46789999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
..|+||||+++|+|.+++.... ..+++.++..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999999987653 35889999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++...............||+.|+||
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aP 210 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDP 210 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCH
T ss_pred ccccccccccccccccCCCccccCH
Confidence 9875433222223445689999998
No 110
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.92 E-value=1.4e-25 Score=230.38 Aligned_cols=148 Identities=26% Similarity=0.334 Sum_probs=125.0
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 497 (596)
..++|+..+.||+|+||.||+|. +.+..|..+++.+ +|||||++++++..++..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 35689999999999999999752 2356789999988 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+|||||++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999998754 5889999999999999999999 88999999999999999999999999999986432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .......+||+.|+||
T Consensus 177 ~--~~~~~~~~gt~~y~aP 193 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAP 193 (353)
T ss_dssp -----------CCGGGCCH
T ss_pred C--CccccccCCCcCeECh
Confidence 2 2234457899999998
No 111
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.6e-25 Score=227.18 Aligned_cols=147 Identities=22% Similarity=0.365 Sum_probs=131.3
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
.++|...+.||+|+||.||++. ..+.+|+.++++++|||||++++++.+.+..|+|||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 4689999999999999999852 34678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC--CCcEEEeccccccccCCCCCc
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~--~~~~kl~dfGla~~~~~~~~~ 581 (596)
++|+|.+++......+++.++..++.|++.|+.||| ..+|+||||||+||+++. ++.+||+|||+++......
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999876667899999999999999999999 889999999999999987 7899999999998764322
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 159 -~~~~~~gt~~y~aP 172 (321)
T 1tki_A 159 -NFRLLFTAPEYYAP 172 (321)
T ss_dssp -EEEEEESCGGGSCH
T ss_pred -ccccccCChhhcCc
Confidence 23446799999998
No 112
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.92 E-value=1.3e-25 Score=233.44 Aligned_cols=148 Identities=27% Similarity=0.323 Sum_probs=130.0
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 497 (596)
..++|+..+.||+|+||.||++. +.+..|..+++++ +|||||++++++.+++..|
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 35689999999999999999752 2367899999887 8999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999998754 5899999999999999999999 89999999999999999999999999999986332
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .......+||+.|+||
T Consensus 206 ~--~~~~~~~~gt~~Y~aP 222 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAP 222 (396)
T ss_dssp T--TCCBCCCCBCGGGCCH
T ss_pred C--CCccccccCCcccCCc
Confidence 2 2234557899999998
No 113
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.92 E-value=2.3e-25 Score=223.51 Aligned_cols=146 Identities=27% Similarity=0.393 Sum_probs=130.5
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 4679999999999999999862 3578899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++|+|.+++... .+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999875 4789999999999999999999 88999999999999999999999999999987643322
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 172 ~~~~~~gt~~y~aP 185 (297)
T 3fxz_A 172 KRSTMVGTPYWMAP 185 (297)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCCccCCcCccCh
Confidence 23446899999998
No 114
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=1.8e-25 Score=225.63 Aligned_cols=205 Identities=22% Similarity=0.222 Sum_probs=110.3
Q ss_pred CCccEEEccCCccccccCccc--cCCCCCCEEEccCCcccccCC----ccccCCCCCCEEecCCCcCcCCCCCccccccC
Q 036342 59 PNLEKLYLWGNNFSGTIPRFI--FNASKLSKLSLGMNSFSGFIP----STFGNLRNLEQLGLDENYLTSSTPELSFLSSL 132 (596)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~ 132 (596)
++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..+++|++|++++|.++...+. .|
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~-----~~ 165 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCE-----QV 165 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTT-----SC
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHH-----Hh
Confidence 345555555555554454444 445555555555555544322 2223444555555555555443322 24
Q ss_pred CCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcccccccccc-ChhccCCCCCCEEEccCCcccCCCCc---cccC
Q 036342 133 SNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGI-PEEISNLTNLVEIDLGGNKLNGSIPI---TLGK 208 (596)
Q Consensus 133 ~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~ 208 (596)
.++++|++|+|++|++.+.. +.. +..+..+++|++|++++|.++...+. .+..
T Consensus 166 ~~l~~L~~L~Ls~N~l~~~~-----------------------~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 166 RAFPALTSLDLSDNPGLGER-----------------------GLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp CCCTTCCEEECCSCTTCHHH-----------------------HHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred ccCCCCCEEECCCCCCccch-----------------------hhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 44444555555554443210 011 11224556666666666666522111 2355
Q ss_pred CCCCCeEEccCCcccccCccchhcC---CCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccce
Q 036342 209 LRKLQRLNLEDNILEGSIPDDICRL---AELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQ 285 (596)
Q Consensus 209 l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~ 285 (596)
+++|++|+|++|.+++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|+++++|. +..+++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccE
Confidence 6666666666666665555555554 46777777777776 4454443 677777777777777655 566777777
Q ss_pred EEcccCCCCC
Q 036342 286 LNFSSNFLTG 295 (596)
Q Consensus 286 L~ls~N~l~~ 295 (596)
|++++|+++.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 7777777764
No 115
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.92 E-value=3.6e-25 Score=223.04 Aligned_cols=163 Identities=34% Similarity=0.584 Sum_probs=142.3
Q ss_pred cccccCHHHHHHhccccccc------ccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCC
Q 036342 431 TWRTFSYLELCRATDEFSEN------NLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHR 481 (596)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~ 481 (596)
....|++.++..++++|... +.||+|+||.||+|. +.+.+|+.++++++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34678999999999999887 899999999999852 4578999999999999
Q ss_pred ccceeeeeeccCCeeEEEEecCCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC
Q 036342 482 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSS--NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD 559 (596)
Q Consensus 482 niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~--~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~ 559 (596)
||+++++++..++..++||||+++|+|.+++... ...+++..+..++.|++.|+.||| ..+|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 9999999999999999999999999999998743 245899999999999999999999 88999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 560 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 560 ~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.++.+||+|||+++...............||+.|+||
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP 204 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP 204 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCCh
Confidence 9999999999999876433222223345799999998
No 116
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.2e-25 Score=230.14 Aligned_cols=149 Identities=29% Similarity=0.449 Sum_probs=125.6
Q ss_pred hcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
..++|+..+.||+|+||+||+|. +.+.+|++++++++|||||++++++...+..|+||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 45789999999999999999862 35789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++++++.+||+|||+++......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~- 162 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK- 162 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-
Confidence 9999999999997654 5889999999999999999999 8899999999999999999999999999988654322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.......+||+.|+||
T Consensus 163 ~~~~~~~~gt~~y~aP 178 (347)
T 3zgw_A 163 DYHLQTCCGSLAYAAP 178 (347)
T ss_dssp ---------CGGGCCH
T ss_pred CccccccCCccCccCH
Confidence 1223456899999998
No 117
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.92 E-value=3.4e-25 Score=224.25 Aligned_cols=144 Identities=28% Similarity=0.375 Sum_probs=128.9
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|..+++.++|||||++++++.+.+..|+|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 4689999999999999999742 3456799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 99999999999998754 5889999999999999999999 999999999999999999999999999999875321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
....+||+.|+||
T Consensus 160 ----~~~~~gt~~y~aP 172 (318)
T 1fot_A 160 ----TYTLCGTPDYIAP 172 (318)
T ss_dssp ----BCCCCSCTTTCCH
T ss_pred ----cccccCCccccCH
Confidence 2346899999998
No 118
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.2e-24 Score=210.95 Aligned_cols=205 Identities=19% Similarity=0.260 Sum_probs=155.6
Q ss_pred CccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCc-cccccCccccCCCCCCEEEccC-CcccccC
Q 036342 22 LIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNN-FSGTIPRFIFNASKLSKLSLGM-NSFSGFI 99 (596)
Q Consensus 22 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~ 99 (596)
++ .+|. + ..+|++|+|++|+++ .++...+..+++|++|++++|+ ++...+.+|.++++|++|+|++ |+|+++.
T Consensus 23 l~-~ip~-~--~~~l~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 23 IQ-RIPS-L--PPSTQTLKLIETHLR-TIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp CS-SCCC-C--CTTCCEEEEESCCCS-EECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred cc-ccCC-C--CCcccEEEEeCCcce-EECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 54 4555 3 347888888888887 4444445568888888888886 7766666788888888888887 8888887
Q ss_pred CccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC---EEECcCC-CCCccCCchhhhccccccc-EEEcccccc
Q 036342 100 PSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT---LIDLSNN-PLDGILPKTSISNLSRSLE-EFYMYNCNI 174 (596)
Q Consensus 100 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~---~L~ls~N-~l~~~~~~~~~~~l~~~L~-~L~l~~n~l 174 (596)
+..|.++++|++|++++|.+++++. |..+++|+ .|++++| .++++.+. .+..+ ++|+ +|++++|++
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~lp~-------~~~l~~L~~L~~L~l~~N~~l~~i~~~-~~~~l-~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKMFPD-------LTKVYSTDIFFILEITDNPYMTSIPVN-AFQGL-CNETLTLKLYNNGF 168 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCSCCC-------CTTCCBCCSEEEEEEESCTTCCEECTT-TTTTT-BSSEEEEECCSCCC
T ss_pred HHHhCCCCCCCEEeCCCCCCccccc-------cccccccccccEEECCCCcchhhcCcc-cccch-hcceeEEEcCCCCC
Confidence 7888888888888888888877432 56666666 8888888 77765443 56666 6788 888888888
Q ss_pred ccccChhccCCCCCCEEEccCCc-ccCCCCccccCC-CCCCeEEccCCcccccCccchhcCCCCcEEEccCC
Q 036342 175 SGGIPEEISNLTNLVEIDLGGNK-LNGSIPITLGKL-RKLQRLNLEDNILEGSIPDDICRLAELYRLELGSN 244 (596)
Q Consensus 175 ~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 244 (596)
+.+.+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 169 ~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 169 TSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred cccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 8655556665 788899999994 887777888888 889999999998884 4543 5678888888776
No 119
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.92 E-value=6.2e-26 Score=234.25 Aligned_cols=259 Identities=18% Similarity=0.189 Sum_probs=170.5
Q ss_pred EEEccCCccccccCccccCCCCCCEEEccCCcccccCC----ccccCCC-CCCEEecCCCcCcCCCCCccccccCCCC-C
Q 036342 63 KLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIP----STFGNLR-NLEQLGLDENYLTSSTPELSFLSSLSNC-K 136 (596)
Q Consensus 63 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~----~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~~~~~~l-~ 136 (596)
+++|++|.+++.+|..+...++|++|+|++|.|++..+ ++|.+++ +|++|+|++|.++...+.. +...+... +
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDE-LVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHH-HHHHHHTSCT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHH-HHHHHhccCC
Confidence 46889999998888877777779999999999988777 7788888 8999999999888754321 11112222 7
Q ss_pred CCCEEECcCCCCCccCCchh---hhcccccccEEEccccccccccChhcc----C-CCCCCEEEccCCcccCCCC----c
Q 036342 137 SLTLIDLSNNPLDGILPKTS---ISNLSRSLEEFYMYNCNISGGIPEEIS----N-LTNLVEIDLGGNKLNGSIP----I 204 (596)
Q Consensus 137 ~L~~L~ls~N~l~~~~~~~~---~~~l~~~L~~L~l~~n~l~~~~~~~~~----~-l~~L~~L~Ls~N~l~~~~p----~ 204 (596)
+|++|+|++|.+++..+... +...+++|++|++++|.|++..+..+. . .++|++|+|++|.+++..+ .
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 88888888888876544311 222225688888888888766555443 3 2578888888887775433 3
Q ss_pred cccCCC-CCCeEEccCCcccccCccchhc----C-CCCcEEEccCCcCccc----chhhhcc-CCCCcEEEeCCCcccCC
Q 036342 205 TLGKLR-KLQRLNLEDNILEGSIPDDICR----L-AELYRLELGSNKLYGS----IPACFGN-LASLRILSLGSNKLTSI 273 (596)
Q Consensus 205 ~~~~l~-~L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~i 273 (596)
.+..++ +|++|+|++|.+++..+..+.. . ++|+.|+|++|.+++. ++..+.. .++|+.|+|++|.++..
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 334444 7778888888777655544433 3 4777777777777652 3444444 34777777777777764
Q ss_pred Cc-----ccccccccceEEcccCCCCCch-------hhhhccccccceEecCCCcCcccCC
Q 036342 274 PL-----TFWNLKDILQLNFSSNFLTGPL-------LLEIGNLKVLIGIDFSMNNFSGVIP 322 (596)
Q Consensus 274 p~-----~~~~l~~L~~L~ls~N~l~~~~-------~~~~~~l~~L~~L~ls~N~~~~~~~ 322 (596)
+. .+..+++|+.|++++|.+.+.. +..+..++.|+.||+++|.+....+
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 33 2345667777777777644332 2244455666666666666654433
No 120
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.92 E-value=2.4e-25 Score=226.28 Aligned_cols=150 Identities=27% Similarity=0.461 Sum_probs=128.5
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 4578899999999999999742 357889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.++++.....+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999876433
Q ss_pred CC-ccccccccccccccCC
Q 036342 579 DQ-SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~-~~~~~~~~gt~~y~aP 596 (596)
.. ........+|+.|+||
T Consensus 205 ~~~~~~~~~~~~t~~y~aP 223 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAP 223 (325)
T ss_dssp --CCEECC---CCGGGSCH
T ss_pred ccceeeccCCCCcccccCH
Confidence 21 1122334568889998
No 121
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.92 E-value=1.3e-25 Score=228.10 Aligned_cols=149 Identities=23% Similarity=0.373 Sum_probs=131.0
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 4689999999999999999852 357799999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 999999999987653 5889999999999999999999 899999999999999999999999999999865433222
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......+||+.|+||
T Consensus 162 ~~~~~~~gt~~y~aP 176 (323)
T 3tki_A 162 RLLNKMCGTLPYVAP 176 (323)
T ss_dssp CCBCSCCSCGGGSCH
T ss_pred cccCCCccCcCccCc
Confidence 223456899999998
No 122
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.92 E-value=4.1e-25 Score=222.74 Aligned_cols=150 Identities=25% Similarity=0.444 Sum_probs=126.2
Q ss_pred hcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.. +..++||||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~lv~e~ 112 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cccceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEEEEec
Confidence 34689999999999999999852 467899999999999999999998764 457999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++|+|.+++......+++.++..++.|++.|++||| ..+|+||||||+||++++++.+||+|||+++.........
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999999999877778999999999999999999999 8899999999999999999999999999998654322222
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 190 ~~~~~~gt~~y~aP 203 (307)
T 3lb7_A 190 QVEQPTGSVLWMAP 203 (307)
T ss_dssp ----CCCCTTSCCH
T ss_pred cccCCCCCcceECc
Confidence 33446799999998
No 123
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.92 E-value=2.3e-26 Score=239.74 Aligned_cols=136 Identities=23% Similarity=0.261 Sum_probs=70.8
Q ss_pred CCCCEEEccCCccc-CCCC---ccccCCCCCCeEEccCCccc--c---cCccchhcCCCCcEEEccCCcCc----ccchh
Q 036342 186 TNLVEIDLGGNKLN-GSIP---ITLGKLRKLQRLNLEDNILE--G---SIPDDICRLAELYRLELGSNKLY----GSIPA 252 (596)
Q Consensus 186 ~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~--~---~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~ 252 (596)
++|++|++++|.++ +..+ ..+..+++|++|++++|.++ | ..+..+..+++|+.|+|++|.++ ..+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 55666666666654 2222 24445556666666666554 1 22324555556666666666553 34455
Q ss_pred hhccCCCCcEEEeCCCcccCC-----Cccc--ccccccceEEcccCCCCC----chhhhh-ccccccceEecCCCcCccc
Q 036342 253 CFGNLASLRILSLGSNKLTSI-----PLTF--WNLKDILQLNFSSNFLTG----PLLLEI-GNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 253 ~~~~l~~L~~L~Ls~N~l~~i-----p~~~--~~l~~L~~L~ls~N~l~~----~~~~~~-~~l~~L~~L~ls~N~~~~~ 320 (596)
.+..+++|+.|+|++|.++.. |..+ +.+++|+.|+|++|.+++ .++..+ .++++|+.|++++|.+++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 555555666666666655542 3333 225555555555555554 244443 3455555555555555544
Q ss_pred C
Q 036342 321 I 321 (596)
Q Consensus 321 ~ 321 (596)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 124
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.92 E-value=2.5e-25 Score=225.94 Aligned_cols=149 Identities=25% Similarity=0.378 Sum_probs=128.6
Q ss_pred hcccccccccccCCCceeehhhH------------------HhHHHHHHHHhhcCCCccceeeeeeccCC----eeEEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE----FKALVL 500 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~~~lV~ 500 (596)
..++|+..+.||+|+||.||+|. .....|+.++++++|||||++++++.... ..|+||
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred chhhchhhheecccCceEEEEEEECCCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 35689999999999999999862 23556888999999999999999998744 479999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCC----------ceEeCCCCCCCeeeCCCCcEEEeccc
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA----------LVIHCDLKPSNVLLDDNMVAHLSDFS 570 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~----------~i~Hrdlk~~NILl~~~~~~kl~dfG 570 (596)
||+++|+|.++++.. .+++..+..++.|+++|+.||| +. +|+||||||+||+++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999775 4889999999999999999999 77 99999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCC
Q 036342 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+++..............+||+.|+||
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aP 202 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAP 202 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred cccccccccCccccccCccCccccCH
Confidence 99876543333233446899999998
No 125
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.92 E-value=3.6e-25 Score=226.72 Aligned_cols=147 Identities=27% Similarity=0.323 Sum_probs=129.1
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 498 (596)
.++|+..+.||+|+||.||++. +.+.+|..+++++ +|||||++++++..++..|+
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 4689999999999999999752 2367899999987 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 v~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999997654 5889999999999999999999 889999999999999999999999999999864322
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
. ......+||+.|+||
T Consensus 164 ~--~~~~~~~gt~~y~aP 179 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAP 179 (345)
T ss_dssp T--CCBCCCCSCGGGCCH
T ss_pred C--CcccccCCCccccCc
Confidence 1 123456899999998
No 126
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.92 E-value=3.8e-25 Score=226.21 Aligned_cols=149 Identities=25% Similarity=0.355 Sum_probs=129.1
Q ss_pred HhcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCee
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~ 496 (596)
...++|...+.||+|+||.||+|. +.+..|..+++++ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 346789999999999999999752 2356788888876 999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 169 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENM 169 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCC
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcc
Confidence 99999999999999998754 5889999999999999999999 8899999999999999999999999999998643
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
... ......+||+.|+||
T Consensus 170 ~~~--~~~~~~~gt~~y~aP 187 (345)
T 1xjd_A 170 LGD--AKTNTFCGTPDYIAP 187 (345)
T ss_dssp CTT--CCBCCCCSCGGGCCH
T ss_pred cCC--CcccCCCCCcccCCh
Confidence 221 123457899999998
No 127
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.92 E-value=5.2e-25 Score=226.66 Aligned_cols=146 Identities=25% Similarity=0.422 Sum_probs=129.6
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.+.|+..+.||+|+||.||++. +.+.+|+.++++++|||||++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4679999999999999999852 3478999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC----cEEEeccccc
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIA 572 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~----~~kl~dfGla 572 (596)
|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++++++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999999997653 6899999999999999999999 88999999999999998776 7999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... .....+||+.|+||
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aP 187 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAP 187 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCH
T ss_pred eEcCCCC---ccccCCCCccEECc
Confidence 8764321 23446799999998
No 128
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.92 E-value=3.2e-25 Score=222.08 Aligned_cols=148 Identities=26% Similarity=0.484 Sum_probs=125.5
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 3579999999999999999752 4578899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.|+| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 99999999999998764 5889999999999999999999 8899999999999999999999999999998764322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.......+||+.|+||
T Consensus 166 -~~~~~~~~gt~~y~aP 181 (294)
T 4eqm_A 166 -LTQTNHVLGTVQYFSP 181 (294)
T ss_dssp ----------CCSSCCH
T ss_pred -ccccCccccCccccCH
Confidence 1223345799999998
No 129
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.92 E-value=2.8e-25 Score=229.02 Aligned_cols=161 Identities=24% Similarity=0.412 Sum_probs=136.9
Q ss_pred cccCHHHHHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc-CCCccc
Q 036342 433 RTFSYLELCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI-RHRNLI 484 (596)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l-~H~niv 484 (596)
..+...+++...++|...+.||+|+||.||+|. +.+.+|+++++++ +|||||
T Consensus 10 ~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv 89 (359)
T 3vhe_A 10 LPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 89 (359)
T ss_dssp SCCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCccee
Confidence 445667777888999999999999999999862 3478899999999 889999
Q ss_pred eeeeeeccCC-eeEEEEecCCCCCHHHHHhhCCC----------------------------------------------
Q 036342 485 KVISSCSNEE-FKALVLEYMPHGSLEKYLYSSNC---------------------------------------------- 517 (596)
Q Consensus 485 ~l~~~~~~~~-~~~lV~e~~~~g~L~~~l~~~~~---------------------------------------------- 517 (596)
++++++...+ ..++||||+++|+|.+++.....
T Consensus 90 ~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (359)
T 3vhe_A 90 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVE 169 (359)
T ss_dssp CEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------
T ss_pred eeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccc
Confidence 9999998755 48999999999999999976532
Q ss_pred -------------------CCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 518 -------------------ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 518 -------------------~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
.+++..++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 246 (359)
T 3vhe_A 170 EKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246 (359)
T ss_dssp --------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC
T ss_pred ccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccc
Confidence 1889999999999999999999 889999999999999999999999999999876443
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
..........||+.|+||
T Consensus 247 ~~~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 247 PDYVRKGDARLPLKWMAP 264 (359)
T ss_dssp TTCEEC--CEECGGGCCH
T ss_pred ccchhccccCCCceeECh
Confidence 333334456789999998
No 130
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.92 E-value=4.2e-25 Score=228.74 Aligned_cols=150 Identities=25% Similarity=0.467 Sum_probs=120.1
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 3589999999999999999752 357789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++......+++.++..++.|+++|++||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999887667899999999999999999999 889999999999999999999999999999876432
Q ss_pred CCc-cccccccccccccCC
Q 036342 579 DQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aP 596 (596)
... .......+|+.|+||
T Consensus 201 ~~~~~~~~~~~~~~~y~aP 219 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSP 219 (373)
T ss_dssp -------------CTTSCH
T ss_pred CccceeccCCCcCCCccCh
Confidence 211 112223467889998
No 131
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.91 E-value=4.7e-25 Score=233.04 Aligned_cols=148 Identities=25% Similarity=0.430 Sum_probs=128.7
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.+++..|+|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 35689999999999999999852 3577999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC---CCCcEEEeccccccccC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~---~~~~~kl~dfGla~~~~ 576 (596)
||||++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999999998764 5899999999999999999999 89999999999999998 46889999999998764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
.... .....+||++|+||
T Consensus 165 ~~~~--~~~~~~gt~~Y~AP 182 (444)
T 3soa_A 165 GEQQ--AWFGFAGTPGYLSP 182 (444)
T ss_dssp TTCC--BCCCSCSCGGGCCH
T ss_pred CCCc--eeecccCCcccCCH
Confidence 3322 23456899999998
No 132
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.91 E-value=5.6e-25 Score=225.63 Aligned_cols=144 Identities=25% Similarity=0.331 Sum_probs=129.3
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 4689999999999999999752 3466799999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 99999999999998754 5889999999999999999999 899999999999999999999999999999876432
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
....+||+.|+||
T Consensus 195 ----~~~~~gt~~y~aP 207 (350)
T 1rdq_E 195 ----TWTLCGTPEALAP 207 (350)
T ss_dssp ----BCCCEECGGGCCH
T ss_pred ----cccccCCccccCH
Confidence 2346899999998
No 133
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.91 E-value=2.3e-25 Score=231.24 Aligned_cols=152 Identities=24% Similarity=0.400 Sum_probs=130.4
Q ss_pred HhcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
...++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+|
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 345689999999999999999852 3567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++......+++..+..++.|+++|++||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999999999876666899999999999999999999 8999999999999999999999999999998653221
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.........+++.|+||
T Consensus 268 ~~~~~~~~~~~~~y~aP 284 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAP 284 (377)
T ss_dssp EECCSSCCEEEGGGSCH
T ss_pred eeecCCCCCCCcCcCCH
Confidence 11111223467789998
No 134
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.91 E-value=6.2e-25 Score=225.37 Aligned_cols=148 Identities=23% Similarity=0.273 Sum_probs=129.3
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 497 (596)
..++|+..+.||+|+||.||++. +.+..|..+++.+ +||+|+++++++..++..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 35689999999999999999752 2356789999887 8999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999998654 5889999999999999999999 88999999999999999999999999999986432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .......+||+.|+||
T Consensus 174 ~--~~~~~~~~gt~~y~aP 190 (353)
T 2i0e_A 174 D--GVTTKTFCGTPDYIAP 190 (353)
T ss_dssp T--TCCBCCCCSCGGGCCH
T ss_pred C--CcccccccCCccccCh
Confidence 2 1223457899999998
No 135
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.91 E-value=8.3e-25 Score=221.92 Aligned_cols=157 Identities=24% Similarity=0.286 Sum_probs=135.4
Q ss_pred cccCHHHHHHhccc----------ccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCC
Q 036342 433 RTFSYLELCRATDE----------FSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHR 481 (596)
Q Consensus 433 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~ 481 (596)
..++++++..+++. |+..+.||+|+||.||+|. +.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45777777777653 7777899999999999852 3577999999999999
Q ss_pred ccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC
Q 036342 482 NLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN 561 (596)
Q Consensus 482 niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~ 561 (596)
||+++++++...+..|+||||+++|+|.+++... .+++..+..++.|+++|+.||| ..+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 9999999999999999999999999999998754 5889999999999999999999 8899999999999999999
Q ss_pred CcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 562 MVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 562 ~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.+||+|||+++...... .......||+.|+||
T Consensus 178 ~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aP 210 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDV--PKRKSLVGTPYWMAP 210 (321)
T ss_dssp CCEEECCCTTCEECCSSS--CCBCCCCSCGGGCCH
T ss_pred CcEEEeeeeeeeecccCc--cccccccCCccccCH
Confidence 999999999998764322 123446799999998
No 136
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.91 E-value=2.9e-25 Score=223.96 Aligned_cols=153 Identities=29% Similarity=0.491 Sum_probs=123.3
Q ss_pred HHHHhcccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
++....++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..+
T Consensus 31 ~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 31 DMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp -CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred cccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 334456789999999999999999852 35778999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeCCCCcEEEecccccc
Q 036342 498 LVLEYMPHGSLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLDDNMVAHLSDFSIAK 573 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~~~~~~kl~dfGla~ 573 (596)
+||||+++|+|.+++..... .+++..++.++.|++.|++||| ..+ |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999987542 3889999999999999999999 888 9999999999999999999999999998
Q ss_pred ccCCCCCccccccccccccccCC
Q 036342 574 LLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
..... ........||+.|+||
T Consensus 188 ~~~~~--~~~~~~~~gt~~y~aP 208 (309)
T 3p86_A 188 LKAST--FLSSKSAAGTPEWMAP 208 (309)
T ss_dssp ----------------CCTTSCH
T ss_pred ccccc--ccccccCCCCccccCh
Confidence 64322 1123446799999998
No 137
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.91 E-value=3.3e-25 Score=225.54 Aligned_cols=149 Identities=25% Similarity=0.423 Sum_probs=127.9
Q ss_pred cccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||+++++|..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 3579999999999999999852 35778999999999999999999998765 78
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+|+||+++|+|.+++......+++..++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 999999999999999887777899999999999999999999 88999999999999999999999999999987654
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
...........||+.|+||
T Consensus 170 ~~~~~~~~~~~~t~~y~aP 188 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp TCC-------CCCGGGSCH
T ss_pred CcccccccCCCccccccCh
Confidence 4333333445678899998
No 138
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=219.98 Aligned_cols=232 Identities=19% Similarity=0.214 Sum_probs=152.8
Q ss_pred CCCEEECCCCCCccccch---hhhCCCCCCEEEccCCcCccccCccCc-cCCCCccEEEccCCccccccC----ccccCC
Q 036342 11 NLEELQLGQNKLIGTVPA---AIFNVSTLKFLGLQNNSLSGSLSSIAN-VRLPNLEKLYLWGNNFSGTIP----RFIFNA 82 (596)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~----~~~~~l 82 (596)
.++.|.+.++.+....-. .+..+++|++|+|++|.+++.++...+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 478889988887532211 122357799999999999977766432 568999999999999997555 345679
Q ss_pred CCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccc
Q 036342 83 SKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSR 162 (596)
Q Consensus 83 ~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~ 162 (596)
++|++|+|++|+|++..+..|.++++|++|+|++|++.+... +.....+..+++|++|++++|+++.. +. .
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~~~l~~L~~L~Ls~N~l~~l-~~-~------ 215 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG-LMAALCPHKFPAIQNLALRNTGMETP-TG-V------ 215 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH-HHTTSCTTSSCCCCSCBCCSSCCCCH-HH-H------
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh-hhHHHhhhcCCCCCEEECCCCCCCch-HH-H------
Confidence 999999999999999999999999999999999999865100 00011246788888888888888632 11 0
Q ss_pred cccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCC---CCCCeEEccCCcccccCccchhcCCCCcEE
Q 036342 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKL---RKLQRLNLEDNILEGSIPDDICRLAELYRL 239 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 239 (596)
....+..+++|++|+|++|.+++..|..+..+ ++|++|+|++|.|+ .+|..+. ++|+.|
T Consensus 216 ---------------~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L 277 (310)
T 4glp_A 216 ---------------CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVL 277 (310)
T ss_dssp ---------------HHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCE
T ss_pred ---------------HHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEE
Confidence 00113344555555555555555444444433 45555555555555 4444443 456666
Q ss_pred EccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 240 ELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 240 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
+|++|++++. |. +..+++|+.|+|++|.++
T Consensus 278 ~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 278 DLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp ECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred ECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 6666666543 22 455566666666666654
No 139
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.91 E-value=8e-25 Score=227.63 Aligned_cols=151 Identities=29% Similarity=0.463 Sum_probs=131.9
Q ss_pred hcccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhc-CCCccceeeeeecc
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSI-RHRNLIKVISSCSN 492 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~ 492 (596)
..++|...+.||+|+||.||+|. +.+.+|+++++++ +|||||++++++..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 35689999999999999999652 3477899999999 99999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCee
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NIL 557 (596)
++..|+||||+++|+|.+++.... ..+++.++..++.|++.|+.||| +.+|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEE
Confidence 999999999999999999998753 34899999999999999999999 889999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 558 l~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++.++.+||+|||+++...............+|+.|+||
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 262 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence 999999999999999876543322333445788999998
No 140
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.91 E-value=5.1e-24 Score=214.69 Aligned_cols=195 Identities=24% Similarity=0.424 Sum_probs=106.9
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
+++|++|++++|.++. ++ .+..+++|++|+|++|.++++.+ |.++++|++|++++|.++.++ .+..+++
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~~-------~~~~l~~ 108 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNVS-------AIAGLQS 108 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCCG-------GGTTCTT
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCch-------hhcCCCC
Confidence 4556666666665552 33 35555666666666666655433 556666666666666655431 2455556
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
|+.|++++|.+++.. .+..+ ++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++
T Consensus 109 L~~L~l~~n~l~~~~---~l~~l-~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 180 (308)
T 1h6u_A 109 IKTLDLTSTQITDVT---PLAGL-SNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180 (308)
T ss_dssp CCEEECTTSCCCCCG---GGTTC-TTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCEEECCCCCCCCch---hhcCC-CCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEEC
Confidence 666666666555431 13333 345555555555544322 5555666666666666654333 555666666666
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL 275 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~ 275 (596)
++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+.|+|++|.++..|.
T Consensus 181 ~~n~l~~~-~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 181 DDNKISDI-SP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CSSCCCCC-GG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECCCE
T ss_pred CCCccCcC-hh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecCCe
Confidence 66666532 22 5556666666666666654432 5556666666666666655544
No 141
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.91 E-value=8.3e-25 Score=222.72 Aligned_cols=150 Identities=24% Similarity=0.435 Sum_probs=124.3
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC-------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE------- 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~------- 494 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||+++++|.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 4679999999999999999852 45789999999999999999999985432
Q ss_pred --------------------------------------------------eeEEEEecCCCCCHHHHHhhCC--CCCCHH
Q 036342 495 --------------------------------------------------FKALVLEYMPHGSLEKYLYSSN--CILDIF 522 (596)
Q Consensus 495 --------------------------------------------------~~~lV~e~~~~g~L~~~l~~~~--~~l~~~ 522 (596)
..++|||||++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 3799999999999999998754 235677
Q ss_pred HHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc----------ccccccccccc
Q 036342 523 QRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS----------MTQTQTLGTIG 592 (596)
Q Consensus 523 ~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~----------~~~~~~~gt~~ 592 (596)
.++.++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++........ ......+||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78999999999999999 899999999999999999999999999999876543211 12234579999
Q ss_pred ccCC
Q 036342 593 YMAP 596 (596)
Q Consensus 593 y~aP 596 (596)
|+||
T Consensus 242 y~aP 245 (332)
T 3qd2_B 242 YMSP 245 (332)
T ss_dssp GSCH
T ss_pred ccCh
Confidence 9998
No 142
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.91 E-value=3.5e-25 Score=225.19 Aligned_cols=149 Identities=23% Similarity=0.392 Sum_probs=126.5
Q ss_pred cccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.. +..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG-SSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECB-SSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC-CccE
Confidence 3578999999999999999852 245689999999999999999999864 5689
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999999999876567888999999999999999999 88999999999999999999999999999998754
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
...........||+.|+||
T Consensus 168 ~~~~~~~~~~~~~~~y~aP 186 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMAL 186 (325)
T ss_dssp CTTCCC-----CCTTTSCH
T ss_pred ccccccccCCCCcccccCh
Confidence 4333333456788899998
No 143
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.91 E-value=9.2e-25 Score=235.74 Aligned_cols=148 Identities=26% Similarity=0.416 Sum_probs=130.9
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
..++|...+.||+|+||.||++. ..+.+|+.++++++|||||++++++.+++..|+
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 35679999999999999999752 236789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 499 VLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
||||++||+|.+++.... ..+++..+..++.||+.|+.||| ..+|+||||||+|||++.++.+||+|||+++....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999997654 34899999999999999999999 88999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. .....+||+.|+||
T Consensus 339 ~~---~~~~~~GT~~Y~AP 354 (576)
T 2acx_A 339 GQ---TIKGRVGTVGYMAP 354 (576)
T ss_dssp TC---CEECCCSCGGGCCH
T ss_pred Cc---cccccCCCccccCH
Confidence 22 23346899999998
No 144
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.91 E-value=9.7e-25 Score=220.42 Aligned_cols=148 Identities=24% Similarity=0.371 Sum_probs=129.5
Q ss_pred hcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
..++|+..+.||+|+||.||+|. +.+.+|++++++++|||||++++++..++..|+||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 35789999999999999999852 34678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||++ |++.+++......+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 174 (311)
T 3niz_A 99 EFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR 174 (311)
T ss_dssp ECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC
T ss_pred cCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc
Confidence 9997 5899988877667899999999999999999999 89999999999999999999999999999987643221
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 175 --~~~~~~~t~~y~aP 188 (311)
T 3niz_A 175 --SYTHEVVTLWYRAP 188 (311)
T ss_dssp -----CCCCCCTTCCH
T ss_pred --cccCCcccCCcCCH
Confidence 23345789999998
No 145
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.91 E-value=1e-24 Score=226.44 Aligned_cols=147 Identities=22% Similarity=0.390 Sum_probs=130.1
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|+..+.||+|+||.||+|. ..+.+|+.++++++|||||++++++.+++..|+||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 4679999999999999999852 3577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC--CCcEEEeccccccccCCCCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD--NMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~--~~~~kl~dfGla~~~~~~~~ 580 (596)
+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++. .+.+||+|||+++......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999999999876667899999999999999999999 889999999999999974 5789999999998764322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 206 --~~~~~~gt~~y~aP 219 (387)
T 1kob_A 206 --IVKVTTATAEFAAP 219 (387)
T ss_dssp --CEEEECSSGGGCCH
T ss_pred --ceeeeccCCCccCc
Confidence 22345799999998
No 146
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.91 E-value=9.1e-26 Score=235.21 Aligned_cols=264 Identities=17% Similarity=0.209 Sum_probs=183.1
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCcc----ccCCCCCCEEecCCCcCcCCCCCc-----cccc
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPST----FGNLRNLEQLGLDENYLTSSTPEL-----SFLS 130 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~----~~~l~~L~~L~l~~N~l~~~~~~~-----~~~~ 130 (596)
.|+...++...+. .++..+..+++|++|+|++|.|+...+.. |..+++|++|+|++|.+..+...+ .+..
T Consensus 10 ~L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~ 88 (386)
T 2ca6_A 10 SLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQ 88 (386)
T ss_dssp CCEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHH
T ss_pred ccccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHH
Confidence 3444444444444 55666777788888888888887654433 556777777777776554332110 0111
Q ss_pred cCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCcccc---
Q 036342 131 SLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLG--- 207 (596)
Q Consensus 131 ~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--- 207 (596)
.+..+++|++|+|++|.+++.. .. .+|..+..+++|++|+|++|.+.+..+..+.
T Consensus 89 ~l~~~~~L~~L~Ls~n~l~~~~----~~------------------~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l 146 (386)
T 2ca6_A 89 ALLKCPKLHTVRLSDNAFGPTA----QE------------------PLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARAL 146 (386)
T ss_dssp HHTTCTTCCEEECCSCCCCTTT----HH------------------HHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHH
T ss_pred HHhhCCcccEEECCCCcCCHHH----HH------------------HHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHH
Confidence 2245555555555555554310 00 3455667777888888888887644433333
Q ss_pred -CC---------CCCCeEEccCCccc-ccCc---cchhcCCCCcEEEccCCcCcc-----cchhhhccCCCCcEEEeCCC
Q 036342 208 -KL---------RKLQRLNLEDNILE-GSIP---DDICRLAELYRLELGSNKLYG-----SIPACFGNLASLRILSLGSN 268 (596)
Q Consensus 208 -~l---------~~L~~L~L~~N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~Ls~N 268 (596)
.+ ++|++|++++|.++ +.++ ..+..+++|++|+|++|.++. ..|..+..+++|+.|+|++|
T Consensus 147 ~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n 226 (386)
T 2ca6_A 147 QELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDN 226 (386)
T ss_dssp HHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSS
T ss_pred HHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCC
Confidence 33 89999999999997 4445 466788999999999999872 34547888999999999999
Q ss_pred ccc-----CCCcccccccccceEEcccCCCCCc----hhhhhc--cccccceEecCCCcCcc----cCChhhhccCCCCC
Q 036342 269 KLT-----SIPLTFWNLKDILQLNFSSNFLTGP----LLLEIG--NLKVLIGIDFSMNNFSG----VIPREIGEKLSYLE 333 (596)
Q Consensus 269 ~l~-----~ip~~~~~l~~L~~L~ls~N~l~~~----~~~~~~--~l~~L~~L~ls~N~~~~----~~~~~~~~~l~~L~ 333 (596)
.++ .+|..+..+++|+.|+|++|.+++. ++..+. .++.|+.|++++|.+++ .+|..+...+++|+
T Consensus 227 ~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~ 306 (386)
T 2ca6_A 227 TFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 306 (386)
T ss_dssp CCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCC
T ss_pred CCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCce
Confidence 994 4788888899999999999999876 455553 38899999999999987 47775556789999
Q ss_pred eEECCCCcccccC
Q 036342 334 DLNLSFNKLKGEI 346 (596)
Q Consensus 334 ~L~l~~N~l~~~~ 346 (596)
.|++++|++++..
T Consensus 307 ~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 307 FLELNGNRFSEED 319 (386)
T ss_dssp EEECTTSBSCTTS
T ss_pred EEEccCCcCCcch
Confidence 9999999887543
No 147
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.91 E-value=6.1e-25 Score=216.98 Aligned_cols=149 Identities=30% Similarity=0.508 Sum_probs=131.4
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMP 504 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 504 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.+++..|+||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 4689999999999999999852 457899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcccc
Q 036342 505 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584 (596)
Q Consensus 505 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~ 584 (596)
+|+|.+++......+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++..... .....
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSS 164 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHST
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc-ccccc
Confidence 99999999877667899999999999999999999 899999999999999999999999999999865422 11123
Q ss_pred ccccccccccCC
Q 036342 585 TQTLGTIGYMAP 596 (596)
Q Consensus 585 ~~~~gt~~y~aP 596 (596)
....+|+.|+||
T Consensus 165 ~~~~~~~~y~aP 176 (269)
T 4hcu_A 165 TGTKFPVKWASP 176 (269)
T ss_dssp TSTTCCGGGCCH
T ss_pred cCcccccccCCH
Confidence 345678889998
No 148
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=5.3e-26 Score=250.65 Aligned_cols=202 Identities=12% Similarity=0.091 Sum_probs=120.2
Q ss_pred ccccEEEccccccccccC-hhccCCCCCCEEEccCCcccCC-CCccccCCCCCCeEEcc---------CCcccccCccch
Q 036342 162 RSLEEFYMYNCNISGGIP-EEISNLTNLVEIDLGGNKLNGS-IPITLGKLRKLQRLNLE---------DNILEGSIPDDI 230 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~~~~~ 230 (596)
++|++|++++|.+++... ..+..+++|++|++++| +... .+.....+++|++|+++ .+.+++.....+
T Consensus 289 ~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l 367 (594)
T 2p1m_B 289 SRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSV 367 (594)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHH
T ss_pred CCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHH
Confidence 567777777777654322 23456677777777766 3321 22222346777777773 344443222223
Q ss_pred h-cCCCCcEEEccCCcCcccchhhhc-cCCCCcEEEeC--C----CcccCCCc------ccccccccceEEcccCCCCCc
Q 036342 231 C-RLAELYRLELGSNKLYGSIPACFG-NLASLRILSLG--S----NKLTSIPL------TFWNLKDILQLNFSSNFLTGP 296 (596)
Q Consensus 231 ~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~ip~------~~~~l~~L~~L~ls~N~l~~~ 296 (596)
. .+++|+.|+++.|.+++.....+. .+++|+.|+|+ + |.++..|. .+..+++|+.|++++ .++..
T Consensus 368 ~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~ 446 (594)
T 2p1m_B 368 SMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDK 446 (594)
T ss_dssp HHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHH
T ss_pred HHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHH
Confidence 2 367777777777777655555554 46777777777 4 55654332 244567777777766 66655
Q ss_pred hhhhhcc-ccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccccCCC-C-CCCCCCCccccccccc
Q 036342 297 LLLEIGN-LKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKGEIPR-G-GSFGNFSAESFEGNEL 365 (596)
Q Consensus 297 ~~~~~~~-l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~-~-~~~~~l~~l~~~~N~~ 365 (596)
.+..+.. +++|+.|++++|.+++.........+++|++|++++|++++..+. . ..+++++.+++++|+.
T Consensus 447 ~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 447 VFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 5555554 677777888877776544433335577788888888777543222 1 2356777777777664
No 149
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=4.5e-24 Score=206.94 Aligned_cols=196 Identities=21% Similarity=0.194 Sum_probs=133.6
Q ss_pred CCCEEECcCCCCCccCCchhhhcccccccEEEccccc-cccccChhccCCCCCCEEEccC-CcccCCCCccccCCCCCCe
Q 036342 137 SLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCN-ISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITLGKLRKLQR 214 (596)
Q Consensus 137 ~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~ 214 (596)
+|+.|++++|+++++.+. .+..+ ++|++|++++|. ++.+.+.+|.++++|++|++++ |.+++..+..|.++++|++
T Consensus 32 ~l~~L~l~~n~l~~i~~~-~~~~l-~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSH-AFSNL-PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp TCCEEEEESCCCSEECTT-TTTTC-TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred cccEEEEeCCcceEECHH-HccCC-CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 445555555555443322 34444 455666666664 5555556677777777777777 7777666677777777777
Q ss_pred EEccCCcccccCccchhcCCCCc---EEEccCC-cCcccchhhhccCCCCc-EEEeCCCcccCCCcccccccccceEEcc
Q 036342 215 LNLEDNILEGSIPDDICRLAELY---RLELGSN-KLYGSIPACFGNLASLR-ILSLGSNKLTSIPLTFWNLKDILQLNFS 289 (596)
Q Consensus 215 L~L~~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~ip~~~~~l~~L~~L~ls 289 (596)
|++++|.+++ +|. +..+++|+ +|++++| ++++..+..|.++++|+ .|++++|.++.+|...+..++|+.|+++
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECT
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcC
Confidence 7777777774 554 66667776 7888887 77766666777788888 8888888887777665555777788888
Q ss_pred cCC-CCCchhhhhccc-cccceEecCCCcCcccCChhhhccCCCCCeEECCCC
Q 036342 290 SNF-LTGPLLLEIGNL-KVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFN 340 (596)
Q Consensus 290 ~N~-l~~~~~~~~~~l-~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N 340 (596)
+|+ +++..+..|..+ ++|+.||+++|+++ .+|.. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh---HhccCceeeccCc
Confidence 884 776666777777 77778888887777 34542 4667777777665
No 150
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.91 E-value=8.1e-25 Score=222.93 Aligned_cols=145 Identities=26% Similarity=0.449 Sum_probs=128.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|+.+++.++|||||++++++..++..|+|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 4689999999999999999752 2577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+ +|+|.+++.... .+++.++..++.|++.|+.||| ..+|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS-
T ss_pred EECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC-
Confidence 9999 789999987654 5889999999999999999999 889999999999999999999999999999875432
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
......+||+.|+||
T Consensus 162 --~~~~~~~gt~~y~aP 176 (336)
T 3h4j_B 162 --NFLKTSCGSPNYAAP 176 (336)
T ss_dssp --BTTCCCTTSTTTSCG
T ss_pred --cccccccCCcCcCCH
Confidence 123456899999998
No 151
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.91 E-value=5.6e-25 Score=227.33 Aligned_cols=147 Identities=30% Similarity=0.386 Sum_probs=122.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHH-HhhcCCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEM-MKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
.++|+..+.||+|+||.||++. +.+..|..+ ++.++|||||++++++..++..|+
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 4689999999999999999752 123455555 577899999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999998754 5788999999999999999999 899999999999999999999999999999864322
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
. ......+||+.|+||
T Consensus 193 ~--~~~~~~~gt~~y~aP 208 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAP 208 (373)
T ss_dssp C--CCCCSBSCCCCCCCH
T ss_pred C--CccccccCCccccCH
Confidence 2 123457899999998
No 152
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.91 E-value=1.3e-24 Score=224.22 Aligned_cols=146 Identities=23% Similarity=0.485 Sum_probs=128.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.+++..|+||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4689999999999999999852 35778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC---CcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~---~~~kl~dfGla~~~~~ 577 (596)
||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.+ +.+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999999987654 5889999999999999999999 8899999999999999865 4599999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. .....+||+.|+||
T Consensus 184 ~~---~~~~~~gt~~y~aP 199 (362)
T 2bdw_A 184 SE---AWHGFAGTPGYLSP 199 (362)
T ss_dssp CC---SCCCSCSCTTTCCH
T ss_pred Cc---ccccCCCCccccCH
Confidence 22 23346899999998
No 153
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.91 E-value=3.5e-25 Score=228.94 Aligned_cols=150 Identities=22% Similarity=0.360 Sum_probs=128.0
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|...+.||+|+||.||+|. ..+.+|+.++++++|||||++++++..++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 4678999999999999999753 2467899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC---cEEEe
Q 036342 497 ALVLEYMPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---VAHLS 567 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~---~~kl~ 567 (596)
|+||||+++|+|.+++.... ..+++.+++.++.|+++|+.||| ..+|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999998643 35889999999999999999999 89999999999999999554 59999
Q ss_pred ccccccccCCCCCccccccccccccccCC
Q 036342 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 568 dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|||+++...............||+.|+||
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPP 255 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred CCccccccccccccccCCCcCCcccEECH
Confidence 99999865322222223345789999998
No 154
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=7.8e-24 Score=217.42 Aligned_cols=242 Identities=18% Similarity=0.147 Sum_probs=178.4
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccC-ccccCCCCCCE-EEc
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIP-RFIFNASKLSK-LSL 90 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~-L~L 90 (596)
++++.++++++ .+|..+ .+++++|+|++|+|+ .++...|..+++|++|+|++|++.+.+| .+|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 67899999997 567665 468999999999998 6777667779999999999999865554 56788888765 677
Q ss_pred cCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcC-CCCCccCCchhhhcccccccEEEc
Q 036342 91 GMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSN-NPLDGILPKTSISNLSRSLEEFYM 169 (596)
Q Consensus 91 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~-N~l~~~~~~~~~~~l~~~L~~L~l 169 (596)
++|+|+.+.|++|.++++|++|++++|.++..++. .+....++..|++++ |.+..+ +...+..+...++.|++
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~-----~~~~~~~l~~l~l~~~~~i~~l-~~~~f~~~~~~l~~L~L 161 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV-----HKIHSLQKVLLDIQDNINIHTI-ERNSFVGLSFESVILWL 161 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC-----TTCCBSSCEEEEEESCTTCCEE-CTTSSTTSBSSCEEEEC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCch-----hhcccchhhhhhhccccccccc-cccchhhcchhhhhhcc
Confidence 78999999999999999999999999999887654 355666778888865 455544 43356666567888888
Q ss_pred cccccccccChhccCCCCCCEEEccC-CcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcc
Q 036342 170 YNCNISGGIPEEISNLTNLVEIDLGG-NKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG 248 (596)
Q Consensus 170 ~~n~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 248 (596)
++|+|+.+.+.+|. ..+|++|++++ |.++.+.+.+|.++++|++|||++|+|+...+..+ .+|+.|.+.++.-..
T Consensus 162 ~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~---~~L~~L~~l~~~~l~ 237 (350)
T 4ay9_X 162 NKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL---ENLKKLRARSTYNLK 237 (350)
T ss_dssp CSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC---TTCCEEECTTCTTCC
T ss_pred ccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh---ccchHhhhccCCCcC
Confidence 88888876665554 46788888874 66776666778888888888888888884333333 445555544443222
Q ss_pred cchhhhccCCCCcEEEeCCCc
Q 036342 249 SIPACFGNLASLRILSLGSNK 269 (596)
Q Consensus 249 ~~p~~~~~l~~L~~L~Ls~N~ 269 (596)
.+| .+..+++|+.++++++.
T Consensus 238 ~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 238 KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CCC-CTTTCCSCCEEECSCHH
T ss_pred cCC-CchhCcChhhCcCCCCc
Confidence 455 36777788888876543
No 155
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.91 E-value=8.3e-25 Score=224.79 Aligned_cols=148 Identities=24% Similarity=0.413 Sum_probs=127.6
Q ss_pred cccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
.+.|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 3579999999999999999852 34678999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc---EEEecccc
Q 036342 498 LVLEYMPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV---AHLSDFSI 571 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~---~kl~dfGl 571 (596)
+|||||++|+|.+++... ...+++..+..++.|++.|+.||| ..+|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998887643 235789999999999999999999 899999999999999986554 99999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++...... ......+||+.|+||
T Consensus 180 a~~~~~~~--~~~~~~~gt~~y~aP 202 (351)
T 3c0i_A 180 AIQLGESG--LVAGGRVGTPHFMAP 202 (351)
T ss_dssp CEECCTTS--CBCCCCCSCGGGCCH
T ss_pred eeEecCCC--eeecCCcCCcCccCH
Confidence 98764322 123446899999998
No 156
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.91 E-value=1.4e-24 Score=217.28 Aligned_cols=146 Identities=25% Similarity=0.392 Sum_probs=128.1
Q ss_pred ccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 445 DEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 579999999999999999852 456789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++ ++.+.+......+++..+..++.|++.|+.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9975 777777766667899999999999999999999 8899999999999999999999999999998764322
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 156 ~~~~~~~~t~~y~aP 170 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPP 170 (292)
T ss_dssp SCCCSCCSCGGGCCH
T ss_pred ccccCCccccCCcCh
Confidence 123446789999998
No 157
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.91 E-value=1.3e-24 Score=214.52 Aligned_cols=150 Identities=27% Similarity=0.419 Sum_probs=131.9
Q ss_pred hcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
..++|+..+.||+|+||.||++. +.+.+|++++++++||||+++++++..++..++||||+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 35689999999999999999752 45789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccc
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~ 583 (596)
++|+|.+++......+++..++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhc
Confidence 999999999876666899999999999999999999 8899999999999999999999999999998764332 222
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
.....+|+.|+||
T Consensus 162 ~~~~~~~~~y~aP 174 (268)
T 3sxs_A 162 SVGTKFPVKWSAP 174 (268)
T ss_dssp CCSCCCCGGGCCH
T ss_pred ccCCCcCcccCCH
Confidence 3345677889998
No 158
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=7.6e-25 Score=223.65 Aligned_cols=234 Identities=16% Similarity=0.273 Sum_probs=120.3
Q ss_pred CCccEEEccCCccccccCccccCCCCCCEEEccCCccccc-CCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 59 PNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGF-IPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 59 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
++++.|++++|.+.+..+. +..+++|++|+|++|.+++. .+..+..+++|++|++++|.++.. .+..++.+++
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~-----~~~~l~~~~~ 143 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDP-----IVNTLAKNSN 143 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHH-----HHHHHTTCTT
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHH-----HHHHHhcCCC
Confidence 3444444444444433222 33444444444444444433 344444444455555544444321 1123444455
Q ss_pred CCEEECcCC-CCCccCCchhhhcccccccEEEcccc-ccccc-cChhccCCC-CCCEEEccCC--ccc-CCCCccccCCC
Q 036342 138 LTLIDLSNN-PLDGILPKTSISNLSRSLEEFYMYNC-NISGG-IPEEISNLT-NLVEIDLGGN--KLN-GSIPITLGKLR 210 (596)
Q Consensus 138 L~~L~ls~N-~l~~~~~~~~~~~l~~~L~~L~l~~n-~l~~~-~~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~ 210 (596)
|++|++++| .+++......+..+ ++|++|++++| .+++. ++..+..++ +|++|++++| .++ +.+|..+..++
T Consensus 144 L~~L~L~~~~~l~~~~l~~~~~~~-~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~ 222 (336)
T 2ast_B 144 LVRLNLSGCSGFSEFALQTLLSSC-SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP 222 (336)
T ss_dssp CSEEECTTCBSCCHHHHHHHHHHC-TTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT
T ss_pred CCEEECCCCCCCCHHHHHHHHhcC-CCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCC
Confidence 555555555 34321001123333 44555555555 55543 345555566 6666666666 333 23445555666
Q ss_pred CCCeEEccCCc-ccccCccchhcCCCCcEEEccCCc-CcccchhhhccCCCCcEEEeCCCcccCCCc-ccccc-cccceE
Q 036342 211 KLQRLNLEDNI-LEGSIPDDICRLAELYRLELGSNK-LYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNL-KDILQL 286 (596)
Q Consensus 211 ~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l-~~L~~L 286 (596)
+|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| ++. .+..+ ..+..|
T Consensus 223 ~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~----i~~~~~~~l~~~l~~L 298 (336)
T 2ast_B 223 NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI----VPDGTLQLLKEALPHL 298 (336)
T ss_dssp TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS----SCTTCHHHHHHHSTTS
T ss_pred CCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc----cCHHHHHHHHhhCcce
Confidence 67777777666 555555566666777777777764 22222224666777777777777 333 22333 236666
Q ss_pred EcccCCCCCchhhhhcc
Q 036342 287 NFSSNFLTGPLLLEIGN 303 (596)
Q Consensus 287 ~ls~N~l~~~~~~~~~~ 303 (596)
++++|.+++..|..++.
T Consensus 299 ~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 299 QINCSHFTTIARPTIGN 315 (336)
T ss_dssp EESCCCSCCTTCSSCSS
T ss_pred EEecccCccccCCcccc
Confidence 67777777776665543
No 159
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.91 E-value=2e-24 Score=232.42 Aligned_cols=148 Identities=28% Similarity=0.400 Sum_probs=130.5
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||++. +.+..|+.++++++|||||++++++..++..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 4689999999999999999752 3467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 500 LEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|||++||+|.+++.... ..+++..+..++.||+.|+.||| ..+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987643 36899999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
.... .....+||+.||||
T Consensus 341 ~~~~--~~~~~~GT~~Y~AP 358 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAP 358 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCH
T ss_pred CCCc--ccccccCCccccCh
Confidence 3221 23346899999998
No 160
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.91 E-value=1.9e-24 Score=219.80 Aligned_cols=146 Identities=26% Similarity=0.428 Sum_probs=129.0
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|...+.||+|+||.||++. +.+.+|+.++++++|||||++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 3578999999999999999852 3478999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC----cEEEeccccc
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIA 572 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~----~~kl~dfGla 572 (596)
|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 99999999999999997653 6889999999999999999999 89999999999999999877 8999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... .....+||+.|+||
T Consensus 166 ~~~~~~~---~~~~~~gt~~y~aP 186 (326)
T 2y0a_A 166 HKIDFGN---EFKNIFGTPEFVAP 186 (326)
T ss_dssp EECCTTS---CCCCCCSCTTTCCH
T ss_pred eECCCCC---ccccccCCcCcCCc
Confidence 8764322 22346799999998
No 161
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.91 E-value=8.7e-25 Score=222.37 Aligned_cols=147 Identities=25% Similarity=0.384 Sum_probs=122.3
Q ss_pred cccccccccccCCCceeehhhH----------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
.++|+..+.||+|+||.||++. ..+.+|+.++++++|||||++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 4689999999999999999631 235679999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 999999999999999997654 5788999999999999999999 889999999999999999999999999999864
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......+||+.|+||
T Consensus 172 ~~~~--~~~~~~~gt~~y~aP 190 (327)
T 3a62_A 172 IHDG--TVTHTFCGTIEYMAP 190 (327)
T ss_dssp ---------CTTSSCCTTSCH
T ss_pred ccCC--ccccccCCCcCccCH
Confidence 3221 123446799999998
No 162
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.91 E-value=9.6e-25 Score=220.58 Aligned_cols=151 Identities=23% Similarity=0.421 Sum_probs=131.2
Q ss_pred hcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 45789999999999999999751 356789999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCC
Q 036342 496 KALVLEYMPHGSLEKYLYSSN-----------------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLK 552 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk 552 (596)
.|+||||+++|+|.+++.... ..+++.+++.++.|+++|+.||| ..+|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 999999999999999998643 23788999999999999999999 8899999999
Q ss_pred CCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 553 PSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 553 ~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+||+++.++.+||+|||+++...............+|+.|+||
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 221 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence 99999999999999999999876543332233445678899998
No 163
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.91 E-value=6.3e-25 Score=224.88 Aligned_cols=154 Identities=27% Similarity=0.438 Sum_probs=131.1
Q ss_pred HHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeecc
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSN 492 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~ 492 (596)
+....++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 33456789999999999999999752 347789999999999999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeC
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSSN-----------------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHC 549 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~~-----------------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hr 549 (596)
++..|+||||+++|+|.+++.... ..+++.+++.++.|+++|+.||| ..+|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecC
Confidence 999999999999999999998642 45889999999999999999999 8899999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 550 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 550 dlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 245 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence 99999999999999999999999865432222223345789999998
No 164
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=1.5e-24 Score=221.49 Aligned_cols=249 Identities=18% Similarity=0.242 Sum_probs=142.0
Q ss_pred CCEEEccCCcccccCCccccCC--CCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCcc-CCchhhhccc
Q 036342 85 LSKLSLGMNSFSGFIPSTFGNL--RNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGI-LPKTSISNLS 161 (596)
Q Consensus 85 L~~L~L~~N~i~~~~~~~~~~l--~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~-~~~~~~~~l~ 161 (596)
++.|++++|.+. +..+..+ ++++.|++++|.+++..+. +..+++|++|++++|.+++. ++. .+..+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~------~~~~~~L~~L~L~~~~l~~~~~~~-~~~~~- 117 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE------HFSPFRVQHMDLSNSVIEVSTLHG-ILSQC- 117 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS------CCCCBCCCEEECTTCEECHHHHHH-HHTTB-
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh------hccCCCCCEEEccCCCcCHHHHHH-HHhhC-
Confidence 444444444443 2333333 4455555555554443322 33445555555555554432 221 33344
Q ss_pred ccccEEEccccccccccChhccCCCCCCEEEccCC-cccCC-CCccccCCCCCCeEEccCC-ccccc-CccchhcCC-CC
Q 036342 162 RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGN-KLNGS-IPITLGKLRKLQRLNLEDN-ILEGS-IPDDICRLA-EL 236 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~~~~~~~l~-~L 236 (596)
++|++|++++|.+++..+..+..+++|++|++++| .+++. .+..+..+++|++|++++| .+++. ++..+..++ +|
T Consensus 118 ~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L 197 (336)
T 2ast_B 118 SKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI 197 (336)
T ss_dssp CCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC
T ss_pred CCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC
Confidence 45666666666666555666666677777777776 45542 4455666677777777777 66643 455566666 77
Q ss_pred cEEEccCC--cCc-ccchhhhccCCCCcEEEeCCCc-ccC-CCcccccccccceEEcccCC-CCCchhhhhccccccceE
Q 036342 237 YRLELGSN--KLY-GSIPACFGNLASLRILSLGSNK-LTS-IPLTFWNLKDILQLNFSSNF-LTGPLLLEIGNLKVLIGI 310 (596)
Q Consensus 237 ~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~-ip~~~~~l~~L~~L~ls~N~-l~~~~~~~~~~l~~L~~L 310 (596)
++|++++| .++ +.+|..+..+++|+.|+|++|. ++. .+..+..+++|++|++++|. ++......+..+++|+.|
T Consensus 198 ~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 277 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 277 (336)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEE
Confidence 77777777 344 3455666667777777777777 443 45566667777777777774 333333356667777777
Q ss_pred ecCCCcCcccCChhhhccC-CCCCeEECCCCcccccCCCC
Q 036342 311 DFSMNNFSGVIPREIGEKL-SYLEDLNLSFNKLKGEIPRG 349 (596)
Q Consensus 311 ~ls~N~~~~~~~~~~~~~l-~~L~~L~l~~N~l~~~~p~~ 349 (596)
++++| ++ ...+..+ ..++.|++++|++++..|..
T Consensus 278 ~l~~~-i~----~~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 278 QVFGI-VP----DGTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp ECTTS-SC----TTCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred eccCc-cC----HHHHHHHHhhCcceEEecccCccccCCc
Confidence 77777 33 2222222 23666667777777766553
No 165
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.91 E-value=1.3e-24 Score=231.61 Aligned_cols=148 Identities=24% Similarity=0.413 Sum_probs=116.3
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccC-----Ce
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE-----EF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 495 (596)
.++|+..+.||+|+||+||+|. +.+.+|+.++++++|||||++++++... +.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 4689999999999999999852 4577899999999999999999999443 56
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||+ +|+|.+++.... .+++..+..++.|+++||+||| ..+|+||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 89999998 579999987653 6899999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCc-------------------------cccccccccccccCC
Q 036342 576 TGEDQS-------------------------MTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~-------------------------~~~~~~~gt~~y~aP 596 (596)
...... ......+||++|+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aP 252 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAP 252 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccCh
Confidence 422110 123456889999998
No 166
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.91 E-value=2.2e-24 Score=229.41 Aligned_cols=146 Identities=27% Similarity=0.464 Sum_probs=130.2
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|+.+++.++||||+++++++..++..|+|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4579999999999999999752 2467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 99999999999997653 6899999999999999999999 9999999999999999999999999999998764321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 171 ---~~~~~~gt~~y~aP 184 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAP 184 (476)
T ss_dssp ---CBCCCCSCSTTCCH
T ss_pred ---cccccCCCcCeECh
Confidence 23456899999998
No 167
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.91 E-value=2.2e-24 Score=218.49 Aligned_cols=147 Identities=25% Similarity=0.418 Sum_probs=114.6
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 4689999999999999999852 357789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 502 YMPHGSLEKYLYSSN-----CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|++ |+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999987542 35889999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......||+.|+||
T Consensus 160 ~~~~--~~~~~~~t~~y~aP 177 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAP 177 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCH
T ss_pred CCcc--cCCCCcccccccCc
Confidence 3221 22345789999998
No 168
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.2e-24 Score=223.07 Aligned_cols=154 Identities=24% Similarity=0.413 Sum_probs=132.6
Q ss_pred HHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc-CCCccceeeeeec
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI-RHRNLIKVISSCS 491 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~ 491 (596)
++...++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999742 3477899999999 9999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhCCC----------------------CCCHHHHHHHHHHHHHHHHHHhccCCCceEeC
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSSNC----------------------ILDIFQRLNIMIDVASALEYLHFGYSALVIHC 549 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~~~----------------------~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hr 549 (596)
.++..|+||||+++|+|.+++..... .+++..++.++.|++.|+.||| ..+|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence 99999999999999999999986542 2788999999999999999999 8999999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 550 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 550 dlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 243 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence 99999999999999999999999876433322233445688899998
No 169
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.91 E-value=1.6e-24 Score=217.48 Aligned_cols=147 Identities=26% Similarity=0.464 Sum_probs=125.1
Q ss_pred hcccccccccccCCCceeehhhH-----------------------------------------------HhHHHHHHHH
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------------------------------KSFDVECEMM 475 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------------------------------~~~~~e~~~l 475 (596)
..++|...+.||+|+||.||+|. +.+.+|++++
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 35689999999999999999852 2367899999
Q ss_pred hhcCCCccceeeeeecc--CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCC
Q 036342 476 KSIRHRNLIKVISSCSN--EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKP 553 (596)
Q Consensus 476 ~~l~H~niv~l~~~~~~--~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~ 553 (596)
++++||||+++++++.. ++..|+||||+++|+|.+++.. ..+++.++..++.|+++|+.||| ..+|+||||||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp 165 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKP 165 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence 99999999999999986 5679999999999999887543 35899999999999999999999 88999999999
Q ss_pred CCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 554 SNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 554 ~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+||+++.++.+||+|||+++....... ......||+.|+||
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aP 206 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAP 206 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCG
T ss_pred HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccCh
Confidence 999999999999999999987643221 23346799999998
No 170
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.90 E-value=1.8e-24 Score=224.01 Aligned_cols=144 Identities=24% Similarity=0.433 Sum_probs=121.4
Q ss_pred ccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCCC
Q 036342 447 FSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPH 505 (596)
Q Consensus 447 ~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 505 (596)
|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+||||+++
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 3446789999999999852 4578999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee--CCCCcEEEeccccccccCCCCCccc
Q 036342 506 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL--DDNMVAHLSDFSIAKLLTGEDQSMT 583 (596)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl--~~~~~~kl~dfGla~~~~~~~~~~~ 583 (596)
|+|.+++......+++..+..++.|+++|+.||| ..+|+||||||+|||+ +.++.+||+|||+++.+.... .
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~ 244 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---K 244 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---B
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---c
Confidence 9999999876667899999999999999999999 8899999999999999 677899999999998764322 2
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
....+||++|+||
T Consensus 245 ~~~~~gt~~y~aP 257 (373)
T 2x4f_A 245 LKVNFGTPEFLAP 257 (373)
T ss_dssp CCCCCSSCTTCCH
T ss_pred cccccCCCcEeCh
Confidence 2345799999998
No 171
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.90 E-value=6.7e-25 Score=233.04 Aligned_cols=148 Identities=28% Similarity=0.343 Sum_probs=123.1
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
..++|+..+.||+|+||.||+|. ..+.+|+.++++++||||+++++++...+..|+
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 35689999999999999999742 235678999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCC-CceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYS-ALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~-~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
||||+++|+|.+++.... .+++..+..++.|++.||+||| . .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 226 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999997654 6889999999999999999999 7 8899999999999999999999999999986432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .......+||++|+||
T Consensus 302 ~--~~~~~~~~gt~~y~aP 318 (446)
T 4ejn_A 302 D--GATMKTFCGTPEYLAP 318 (446)
T ss_dssp -------CCSSSCGGGCCH
T ss_pred C--CcccccccCCccccCH
Confidence 2 2223457899999998
No 172
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.90 E-value=2e-24 Score=220.03 Aligned_cols=149 Identities=26% Similarity=0.347 Sum_probs=130.0
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
.++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++..++..|+||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 3579999999999999999863 3578999999999 9999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc-----EEEeccccccccCCC
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV-----AHLSDFSIAKLLTGE 578 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~-----~kl~dfGla~~~~~~ 578 (596)
+|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++. +||+|||+++.+...
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99999999876667899999999999999999999 889999999999999998887 999999999876433
Q ss_pred CCcc-----ccccccccccccCC
Q 036342 579 DQSM-----TQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~-----~~~~~~gt~~y~aP 596 (596)
.... .....+||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aP 186 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSI 186 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred CCCccccccccCCcCCCccccCh
Confidence 2211 12356899999998
No 173
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.90 E-value=7e-25 Score=221.49 Aligned_cols=145 Identities=22% Similarity=0.256 Sum_probs=122.8
Q ss_pred ccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++|+..+.||+|+||+||+|. .....|+..+.++ +|||||+++++|.+++..|+||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 579999999999999999852 1234455555544 9999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||+ +|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 77999999887767999999999999999999999 8899999999999999999999999999998764321
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......||++|+||
T Consensus 212 --~~~~~~gt~~y~aP 225 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAP 225 (311)
T ss_dssp -----CCCCCGGGCCG
T ss_pred --CCcccCCCccccCH
Confidence 23345799999998
No 174
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.90 E-value=1.7e-24 Score=215.50 Aligned_cols=151 Identities=24% Similarity=0.419 Sum_probs=128.7
Q ss_pred HhcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
...++|+..+.||+|+||.||++. +.+.+|++++++++||||+++++++..++..|+||||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 345689999999999999999752 4678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++|+|.+++......+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cc
Confidence 9999999999875557899999999999999999999 8999999999999999999999999999998654221 11
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
......+|+.|+||
T Consensus 177 ~~~~~~~~~~y~aP 190 (283)
T 3gen_A 177 SSVGSKFPVRWSPP 190 (283)
T ss_dssp STTSTTSCGGGCCH
T ss_pred cccCCccCcccCCH
Confidence 22334577889998
No 175
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.90 E-value=1.7e-24 Score=223.24 Aligned_cols=146 Identities=25% Similarity=0.343 Sum_probs=120.9
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
.++|...+.||+|+||+||++. +.+.+|+.++++++|||||++++++..++..|+||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 4689999999999999999752 45789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc--EEEeccccccccCCCCCc
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV--AHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~--~kl~dfGla~~~~~~~~~ 581 (596)
++|+|.+++.... .+++..+..++.|+++|+.||| ..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 99 ~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~--- 171 (361)
T 3uc3_A 99 SGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH--- 171 (361)
T ss_dssp CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc---
Confidence 9999999997654 5889999999999999999999 899999999999999987665 999999999854221
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......+||++|+||
T Consensus 172 ~~~~~~~gt~~y~aP 186 (361)
T 3uc3_A 172 SQPKSTVGTPAYIAP 186 (361)
T ss_dssp ---------CTTSCH
T ss_pred CCCCCCcCCCCcCCh
Confidence 123345799999998
No 176
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.90 E-value=1.2e-24 Score=217.24 Aligned_cols=146 Identities=23% Similarity=0.398 Sum_probs=125.6
Q ss_pred ccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++..++..|+||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 578999999999999999852 3567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++ +|.+++......+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 975 999999876667899999999999999999999 88999999999999999999999999999987543211
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 156 KYTHEIVTLWYRAP 169 (288)
T ss_dssp ------CCCTTCCH
T ss_pred ccccccccccccCc
Confidence 22345789999998
No 177
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.90 E-value=8.9e-25 Score=221.76 Aligned_cols=159 Identities=19% Similarity=0.373 Sum_probs=134.1
Q ss_pred cCHHHHHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceee
Q 036342 435 FSYLELCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVI 487 (596)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~ 487 (596)
+..+++....++|...+.||+|+||.||+|. ..+.+|+.++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 3444555667899999999999999999741 2477899999999999999999
Q ss_pred eeeccCCeeEEEEecCCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee
Q 036342 488 SSCSNEEFKALVLEYMPHGSLEKYLYSSN---------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558 (596)
Q Consensus 488 ~~~~~~~~~~lV~e~~~~g~L~~~l~~~~---------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl 558 (596)
+++..++..++||||+++|+|.+++.... ..+++..++.++.|++.|+.||| ..+|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence 99999999999999999999999987532 34688999999999999999999 8899999999999999
Q ss_pred CCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 559 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 559 ~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.++.+||+|||+++...............||+.|+||
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccCh
Confidence 99999999999999865432222223345678899998
No 178
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.90 E-value=1.4e-24 Score=215.80 Aligned_cols=149 Identities=23% Similarity=0.389 Sum_probs=118.4
Q ss_pred hcccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++. ++..|
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 45689999999999999999742 35778999999999999999999985 45689
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence 999999999999999877667899999999999999999999 88999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ........+|+.|+||
T Consensus 169 ~~-~~~~~~~~~~~~y~aP 186 (281)
T 1mp8_A 169 ST-YYKASKGKLPIKWMAP 186 (281)
T ss_dssp -----------CCGGGCCH
T ss_pred cc-ccccccCCCcccccCh
Confidence 22 1122334678899998
No 179
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.90 E-value=8.6e-25 Score=223.00 Aligned_cols=154 Identities=23% Similarity=0.401 Sum_probs=131.6
Q ss_pred HHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc-CCCccceeeeeec
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI-RHRNLIKVISSCS 491 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~ 491 (596)
++...++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 120 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT 120 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 34456789999999999999999752 3477899999999 8999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSS-------------NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~-------------~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl 558 (596)
.++..|+||||+++|+|.+++... ...+++..++.++.|++.|+.||| ..+|+||||||+||++
T Consensus 121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~ 197 (333)
T 2i1m_A 121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL 197 (333)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence 999999999999999999998753 234789999999999999999999 8899999999999999
Q ss_pred CCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 559 DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 559 ~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.++.+||+|||+++...............||+.|+||
T Consensus 198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 235 (333)
T 2i1m_A 198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235 (333)
T ss_dssp EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred CCCCeEEECccccccccccccceeecCCCCCCccccCH
Confidence 99999999999999866433222223345678899998
No 180
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=4.7e-23 Score=201.34 Aligned_cols=177 Identities=25% Similarity=0.271 Sum_probs=97.4
Q ss_pred CCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEec
Q 036342 35 TLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGL 114 (596)
Q Consensus 35 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 114 (596)
+.++++++++.++ .+|... .++|+.|+|++|.+++..+..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGI---PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCC---CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCcc-ccCCCC---CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 4567777777776 344321 246777777777777666667777777777777777777777766777777777777
Q ss_pred CCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEcc
Q 036342 115 DENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLG 194 (596)
Q Consensus 115 ~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 194 (596)
++|.++.+++. .|..+++|++|+|++|+|++..+. .+..+ ++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 91 ~~n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 163 (251)
T 3m19_A 91 ANNQLASLPLG-----VFDHLTQLDKLYLGGNQLKSLPSG-VFDRL-TKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLS 163 (251)
T ss_dssp TTSCCCCCCTT-----TTTTCTTCCEEECCSSCCCCCCTT-TTTTC-TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCcccccChh-----HhcccCCCCEEEcCCCcCCCcChh-HhccC-CcccEEECcCCcCCccCHHHcCcCcCCCEEECC
Confidence 77777665443 355566666666666655543221 22333 334444444444443333333334444444444
Q ss_pred CCcccCCCCccccCCCCCCeEEccCCcc
Q 036342 195 GNKLNGSIPITLGKLRKLQRLNLEDNIL 222 (596)
Q Consensus 195 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l 222 (596)
+|++++..+..|..+++|++|++++|.+
T Consensus 164 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 191 (251)
T 3m19_A 164 TNQLQSVPHGAFDRLGKLQTITLFGNQF 191 (251)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCcCCccCHHHHhCCCCCCEEEeeCCce
Confidence 4444333333333333333333333333
No 181
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.90 E-value=9.5e-24 Score=216.80 Aligned_cols=229 Identities=17% Similarity=0.181 Sum_probs=188.0
Q ss_pred CCCcccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccE-EEccCCccccccCccc
Q 036342 1 EIPLEIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEK-LYLWGNNFSGTIPRFI 79 (596)
Q Consensus 1 ~ip~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~-L~L~~N~l~~~~~~~~ 79 (596)
+||.++ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.++...|..+++|++ ++++.|+++...|..|
T Consensus 23 ~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f 100 (350)
T 4ay9_X 23 EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAF 100 (350)
T ss_dssp SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSB
T ss_pred ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhh
Confidence 578877 4789999999999998777899999999999999999987888877778888775 6677899998889999
Q ss_pred cCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC-CcCcCCCCCccccccCCCCC-CCCEEECcCCCCCccCCchhh
Q 036342 80 FNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE-NYLTSSTPELSFLSSLSNCK-SLTLIDLSNNPLDGILPKTSI 157 (596)
Q Consensus 80 ~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~~~~~~~~~l~-~L~~L~ls~N~l~~~~~~~~~ 157 (596)
.++++|++|++++|+|+...+..+....++..|++.+ |.+..++.. .|..+. .++.|++++|+|+.+.+. .+
T Consensus 101 ~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~-----~f~~~~~~l~~L~L~~N~i~~i~~~-~f 174 (350)
T 4ay9_X 101 QNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERN-----SFVGLSFESVILWLNKNGIQEIHNS-AF 174 (350)
T ss_dssp CCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTT-----SSTTSBSSCEEEECCSSCCCEECTT-SS
T ss_pred hhccccccccccccccccCCchhhcccchhhhhhhcccccccccccc-----chhhcchhhhhhccccccccCCChh-hc
Confidence 9999999999999999998888888888899999865 678776654 466664 688999999999876443 44
Q ss_pred hcccccccEEEccc-cccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCC-cccccCccchhcCCC
Q 036342 158 SNLSRSLEEFYMYN-CNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN-ILEGSIPDDICRLAE 235 (596)
Q Consensus 158 ~~l~~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~ 235 (596)
.. .+|++|++++ |.++.+.+.+|.++++|++||+++|+|+..++..|. +|+.|.+.++ .++ .+| .+..+++
T Consensus 175 ~~--~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~-~lP-~l~~l~~ 247 (350)
T 4ay9_X 175 NG--TQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLK-KLP-TLEKLVA 247 (350)
T ss_dssp TT--EEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCC-CCC-CTTTCCS
T ss_pred cc--cchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcC-cCC-CchhCcC
Confidence 33 4799999975 778777678899999999999999999977666555 4555554444 344 666 4888999
Q ss_pred CcEEEccCC
Q 036342 236 LYRLELGSN 244 (596)
Q Consensus 236 L~~L~Ls~N 244 (596)
|+.++++++
T Consensus 248 L~~l~l~~~ 256 (350)
T 4ay9_X 248 LMEASLTYP 256 (350)
T ss_dssp CCEEECSCH
T ss_pred hhhCcCCCC
Confidence 999999765
No 182
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.90 E-value=3.5e-24 Score=217.13 Aligned_cols=147 Identities=26% Similarity=0.420 Sum_probs=127.5
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC--eeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE--FKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|++++++++||||+++++++...+ ..|+|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 3579999999999999999852 34678999999999999999999987654 78999
Q ss_pred EecCCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee----CCCCcEEEecccccc
Q 036342 500 LEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL----DDNMVAHLSDFSIAK 573 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl----~~~~~~kl~dfGla~ 573 (596)
|||+++|+|.+++.... ..+++.++..++.|++.|+.||| +.+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999999998754 23899999999999999999999 8899999999999999 788899999999998
Q ss_pred ccCCCCCccccccccccccccCC
Q 036342 574 LLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
...... ......||+.|+||
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aP 184 (319)
T 4euu_A 165 ELEDDE---QFVSLYGTEEYLHP 184 (319)
T ss_dssp ECCTTC---CBCCCCSCGGGCCH
T ss_pred ecCCCC---ceeecccCCCccCH
Confidence 764332 22345799999998
No 183
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.90 E-value=1.7e-24 Score=216.30 Aligned_cols=150 Identities=25% Similarity=0.405 Sum_probs=118.7
Q ss_pred hcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++. .+..++||||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 100 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQW 100 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred CccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEEEEEe
Confidence 45689999999999999999852 45789999999999999999999764 4568999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
+++++|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999999999877667899999999999999999999 8899999999999999999999999999998654322222
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 178 ~~~~~~gt~~y~aP 191 (289)
T 3og7_A 178 QFEQLSGSILWMAP 191 (289)
T ss_dssp ------CCCTTCCH
T ss_pred cccccCCCccccCc
Confidence 23446799999998
No 184
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.90 E-value=1.9e-24 Score=219.85 Aligned_cols=149 Identities=25% Similarity=0.423 Sum_probs=122.5
Q ss_pred cccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++ .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 3579999999999999999852 45788999999999999999999998765 78
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+|+||+++|+|.+++......+++..++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 999999999999999887767899999999999999999999 88999999999999999999999999999987644
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
...........+|+.|+||
T Consensus 170 ~~~~~~~~~~~~t~~y~aP 188 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp ----------CCCGGGSCH
T ss_pred ccccccccCCCccccccCH
Confidence 3322233345678899998
No 185
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.90 E-value=3e-24 Score=230.70 Aligned_cols=151 Identities=26% Similarity=0.465 Sum_probs=131.6
Q ss_pred HhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
...++|...+.||+|+||.||+|. +.+.+|+.++++++|||||+++++|..++..|+|||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 345678999999999999999852 468899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 502 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||++|+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 999999999998743 45889999999999999999999 8999999999999999999999999999998764322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
........+|+.|+||
T Consensus 373 ~~~~~~~~~~~~y~aP 388 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAP 388 (495)
T ss_dssp EECCTTCCCCGGGCCH
T ss_pred eeecCCCcCCcceeCH
Confidence 2222344577899998
No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.90 E-value=2.7e-24 Score=217.15 Aligned_cols=151 Identities=23% Similarity=0.413 Sum_probs=131.4
Q ss_pred hcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEE 494 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 494 (596)
..++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++..++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 45689999999999999999752 3577899999999 9999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhCCC-----------------CCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCee
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNC-----------------ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~-----------------~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NIL 557 (596)
..++||||+++|+|.+++..... .+++..++.++.|+++|+.||| ..+|+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEE
Confidence 99999999999999999986542 3889999999999999999999 889999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 558 l~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++.++.+||+|||+++...............||+.|+||
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 216 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeCh
Confidence 999999999999999876543322223345678899998
No 187
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=4.1e-23 Score=208.01 Aligned_cols=208 Identities=22% Similarity=0.376 Sum_probs=162.3
Q ss_pred EECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCc
Q 036342 15 LQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNS 94 (596)
Q Consensus 15 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 94 (596)
+.+..+.+++..+ +..+++|++|++++|.++ .++.+. .+++|++|+|++|.+++..+ +..+++|++|+|++|+
T Consensus 24 ~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~-~l~~~~--~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~ 96 (308)
T 1h6u_A 24 IAAGKSNVTDTVT--QADLDGITTLSAFGTGVT-TIEGVQ--YLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNP 96 (308)
T ss_dssp HHTTCSSTTSEEC--HHHHHTCCEEECTTSCCC-CCTTGG--GCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCC
T ss_pred HHhCCCCcCceec--HHHcCCcCEEEeeCCCcc-Cchhhh--ccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCc
Confidence 3455555554332 345678888888888887 455443 48888888888888885443 8888888888888888
Q ss_pred ccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcccccc
Q 036342 95 FSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNI 174 (596)
Q Consensus 95 i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l 174 (596)
+++. +.|..+++|++|++++|.++.++ .+..+++|+.|++++|.+++..+ +..+ ++|++|++++|.+
T Consensus 97 l~~~--~~~~~l~~L~~L~l~~n~l~~~~-------~l~~l~~L~~L~l~~n~l~~~~~---l~~l-~~L~~L~l~~n~l 163 (308)
T 1h6u_A 97 LKNV--SAIAGLQSIKTLDLTSTQITDVT-------PLAGLSNLQVLYLDLNQITNISP---LAGL-TNLQYLSIGNAQV 163 (308)
T ss_dssp CSCC--GGGTTCTTCCEEECTTSCCCCCG-------GGTTCTTCCEEECCSSCCCCCGG---GGGC-TTCCEEECCSSCC
T ss_pred CCCc--hhhcCCCCCCEEECCCCCCCCch-------hhcCCCCCCEEECCCCccCcCcc---ccCC-CCccEEEccCCcC
Confidence 8864 36888888899999888887742 37788889999999998886532 5566 6799999999998
Q ss_pred ccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcc
Q 036342 175 SGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYG 248 (596)
Q Consensus 175 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 248 (596)
++..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++.. .+..+++|+.|++++|++++
T Consensus 164 ~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 164 SDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 87544 8889999999999999987654 788999999999999998544 37889999999999999874
No 188
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.90 E-value=1.4e-24 Score=217.46 Aligned_cols=150 Identities=26% Similarity=0.464 Sum_probs=124.6
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccC--Cee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE--EFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 496 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 4689999999999999998752 4578999999999999999999998653 458
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
++||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 9999999999999999887666899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......+|+.|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aP 186 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAP 186 (295)
T ss_dssp ----------CTTCGGGGCCH
T ss_pred CCcceeeeccCCCCccceeCc
Confidence 33221 122334578889998
No 189
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.90 E-value=5.4e-24 Score=211.11 Aligned_cols=146 Identities=30% Similarity=0.427 Sum_probs=129.7
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|...+.||+|+||.||+|. +.+.+|++++++++||||+++++++..++..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 4679999999999999999852 4678999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccCCCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~~~~ 579 (596)
+++++|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++ +.++.+||+|||+++......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999999987754 5789999999999999999999 8999999999999999 788999999999998764322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 164 ---~~~~~~~t~~y~aP 177 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSP 177 (277)
T ss_dssp ---CBCCCCSCTTTCCH
T ss_pred ---chhccCCCCCccCh
Confidence 23345799999998
No 190
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.90 E-value=2e-24 Score=215.58 Aligned_cols=144 Identities=24% Similarity=0.417 Sum_probs=128.1
Q ss_pred cccccccccccCCCceeehhhH----------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 4689999999999999999851 457789999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc--------EEEe
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV--------AHLS 567 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~--------~kl~ 567 (596)
.++||||+++|+|.+++......+++..+..++.|++.|+.||| +.+|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999999999887656899999999999999999999 899999999999999988876 9999
Q ss_pred ccccccccCCCCCccccccccccccccCC
Q 036342 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 568 dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|||+++.... .....||+.|+||
T Consensus 164 Dfg~~~~~~~------~~~~~~~~~y~aP 186 (289)
T 4fvq_A 164 DPGISITVLP------KDILQERIPWVPP 186 (289)
T ss_dssp CCCSCTTTSC------HHHHHHTTTTSCH
T ss_pred cCcccccccC------ccccCCcCcccCH
Confidence 9999875421 2234688899998
No 191
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.90 E-value=3.6e-24 Score=214.74 Aligned_cols=150 Identities=25% Similarity=0.422 Sum_probs=126.7
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeec-cCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCS-NEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~-~~~~~~ 497 (596)
...|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++. .++..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 4568889999999999999742 35778999999999999999999864 556789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 999999999999999876667899999999999999999999 88999999999999999999999999999987643
Q ss_pred CCC--ccccccccccccccCC
Q 036342 578 EDQ--SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~--~~~~~~~~gt~~y~aP 596 (596)
... ........||+.|+||
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aP 201 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMAL 201 (298)
T ss_dssp GGGCBC-----CCBCGGGSCH
T ss_pred cchhccccccCCCCCccccCh
Confidence 221 1123345678899998
No 192
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.90 E-value=6.7e-24 Score=235.72 Aligned_cols=148 Identities=23% Similarity=0.272 Sum_probs=129.6
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~ 497 (596)
..++|+..+.||+|+||.||+|. +.+..|..+++.+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 45689999999999999999752 2356788888887 7999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++.... .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+|+....
T Consensus 419 lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999998754 5899999999999999999999 89999999999999999999999999999986432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ......+||+.||||
T Consensus 495 ~~--~~~~~~~GT~~Y~AP 511 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAP 511 (674)
T ss_dssp TT--CCBCCCCSCSSSCCH
T ss_pred CC--cccccccCCCcccCH
Confidence 22 234557899999998
No 193
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.90 E-value=4.5e-24 Score=216.88 Aligned_cols=141 Identities=25% Similarity=0.375 Sum_probs=111.3
Q ss_pred cccccCCCceeehhhH------------------HhHHHHHHHHhhcC-CCccceeeeeeccCCeeEEEEecCCCCCHHH
Q 036342 450 NNLIGRGGFALFIRAF------------------KSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEK 510 (596)
Q Consensus 450 ~~~ig~G~~g~v~~~~------------------~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~g~L~~ 510 (596)
.+.||+|+||.||+|. ..+.+|+.++++++ |||||++++++.+++..|+||||+++|+|.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence 4789999999999852 45778999999997 9999999999999999999999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC---cEEEeccccccccCCCCCccccccc
Q 036342 511 YLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---VAHLSDFSIAKLLTGEDQSMTQTQT 587 (596)
Q Consensus 511 ~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~---~~kl~dfGla~~~~~~~~~~~~~~~ 587 (596)
++.... .+++.++..++.|++.|+.||| ..+|+||||||+||+++.++ .+||+|||+++...... ......
T Consensus 96 ~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~ 169 (325)
T 3kn6_A 96 RIKKKK-HFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTP 169 (325)
T ss_dssp HHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred HHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Cccccc
Confidence 998764 6899999999999999999999 89999999999999997665 89999999998654322 223456
Q ss_pred cccccccCC
Q 036342 588 LGTIGYMAP 596 (596)
Q Consensus 588 ~gt~~y~aP 596 (596)
+||+.|+||
T Consensus 170 ~~t~~y~aP 178 (325)
T 3kn6_A 170 CFTLHYAAP 178 (325)
T ss_dssp ---------
T ss_pred CCCcCccCH
Confidence 789999998
No 194
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.90 E-value=3.7e-24 Score=226.19 Aligned_cols=148 Identities=24% Similarity=0.404 Sum_probs=124.9
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccC-----Ce
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE-----EF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~ 495 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 4689999999999999999852 4577999999999999999999999766 56
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||++ |+|.++++.. ..+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999996 5999999765 35899999999999999999999 889999999999999999999999999999976
Q ss_pred CCCCCc--------------------cccccccccccccCC
Q 036342 576 TGEDQS--------------------MTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~--------------------~~~~~~~gt~~y~aP 596 (596)
...... ......+||++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 220 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220 (432)
T ss_dssp -------------------------------CCCCCTTCCH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCH
Confidence 432211 113557899999998
No 195
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.90 E-value=7.2e-24 Score=210.30 Aligned_cols=149 Identities=27% Similarity=0.453 Sum_probs=120.8
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 34689999999999999999852 357789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++......+++..+..++.|+++|+.||| ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999877667899999999999999999999 889999999999999999999999999999875422
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
.. ......||+.|+||
T Consensus 166 ~~--~~~~~~~~~~y~aP 181 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISP 181 (278)
T ss_dssp ------------------
T ss_pred CC--cceeccCCCCcCCc
Confidence 21 12345789999998
No 196
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.90 E-value=8.8e-24 Score=215.66 Aligned_cols=151 Identities=28% Similarity=0.481 Sum_probs=130.3
Q ss_pred hcccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhc-CCCccceeeeeecc
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSI-RHRNLIKVISSCSN 492 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~ 492 (596)
..++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 35789999999999999999751 3467899999999 99999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCee
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVL 557 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NIL 557 (596)
++..|+||||+++|+|.+++.... ..+++..++.++.|++.|+.||| ..+|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence 999999999999999999998653 23789999999999999999999 889999999999999
Q ss_pred eCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 558 LDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 558 l~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++.++.+||+|||+++...............+|+.|+||
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 228 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence 999999999999999876543322223345678899998
No 197
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=6.8e-23 Score=200.18 Aligned_cols=158 Identities=26% Similarity=0.285 Sum_probs=89.1
Q ss_pred ccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEc
Q 036342 162 RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLEL 241 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (596)
++++.|+|++|++++..+..|.++++|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 34555555555555555555556666666666666666555555556666666666666665444445555556666666
Q ss_pred cCCcCcccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcc
Q 036342 242 GSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSG 319 (596)
Q Consensus 242 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~ 319 (596)
++|++++..+..|..+++|+.|+|++|+++.+|. .+..+++|++|++++|++++..+..+..+++|+.|++++|.+++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeC
Confidence 6666555555555555566666666665555544 34455555555555555555444455555555555555555543
No 198
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.90 E-value=4.1e-24 Score=218.51 Aligned_cols=148 Identities=26% Similarity=0.422 Sum_probs=127.3
Q ss_pred hcccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecCC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMP 504 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 504 (596)
..++|+..+.||+|+||.||++. ....+|++++.++ +|||||++++++.+++..|+|||||+
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~ 99 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMK 99 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCC
Confidence 35689999999999999999863 2356799999888 79999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC----CcEEEeccccccccCCCCC
Q 036342 505 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN----MVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 505 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~----~~~kl~dfGla~~~~~~~~ 580 (596)
+|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++.++ +.+||+|||+++.......
T Consensus 100 gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 100 GGELLDKILRQK-FFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp SCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 999999997654 5899999999999999999999 8899999999999998543 3599999999987643321
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 176 --~~~~~~gt~~y~aP 189 (342)
T 2qr7_A 176 --LLMTPCYTANFVAP 189 (342)
T ss_dssp --CBCCSSCCSSCCCH
T ss_pred --ceeccCCCccccCH
Confidence 23456899999998
No 199
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.90 E-value=6.3e-24 Score=213.36 Aligned_cols=149 Identities=22% Similarity=0.442 Sum_probs=128.7
Q ss_pred ccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccC--Cee
Q 036342 445 DEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE--EFK 496 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~ 496 (596)
+.|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..+ ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 468899999999999998752 3577899999999999999999999876 568
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
++||||+++|+|.+++......+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 9999999999999999776667899999999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......||..|+||
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aP 198 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAP 198 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCH
T ss_pred CCCcceeccCCCCCCccccCC
Confidence 43221 123345688889998
No 200
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.90 E-value=3.3e-24 Score=220.04 Aligned_cols=147 Identities=26% Similarity=0.410 Sum_probs=116.5
Q ss_pred hcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 35679999999999999999852 34678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEeccccccccCCCCC
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~dfGla~~~~~~~~ 580 (596)
++|+|.+++.... .+++.++..++.|++.|+.||| ..+|+||||||+||+++. ++.+||+|||+++.....
T Consensus 131 ~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~-- 204 (349)
T 2w4o_A 131 TGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ-- 204 (349)
T ss_dssp CSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcc--
Confidence 9999999997654 5889999999999999999999 889999999999999975 889999999999865322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......+||+.|+||
T Consensus 205 -~~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 205 -VLMKTVCGTPGYCAP 219 (349)
T ss_dssp ---------CGGGSCH
T ss_pred -cccccccCCCCccCH
Confidence 122346799999998
No 201
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.90 E-value=6.8e-24 Score=210.66 Aligned_cols=146 Identities=28% Similarity=0.457 Sum_probs=126.5
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 45789999999999999999852 346789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999997654 5789999999999999999999 899999999999999999999999999998754322
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 163 ----~~~~~~~~~~y~aP 176 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPP 176 (279)
T ss_dssp ---------CCCCTTCCH
T ss_pred ----cccccCCCCCccCH
Confidence 12345789999998
No 202
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.90 E-value=4.7e-24 Score=218.75 Aligned_cols=143 Identities=29% Similarity=0.388 Sum_probs=127.2
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.+.|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|+|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 3568899999999999999752 3577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||++ |++.+++......+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 99997 6898888766667899999999999999999999 88999999999999999999999999999986532
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
....+||+.|+||
T Consensus 207 ----~~~~~gt~~y~aP 219 (348)
T 1u5q_A 207 ----ANSFVGTPYWMAP 219 (348)
T ss_dssp ----BCCCCSCGGGCCH
T ss_pred ----CCcccCCcceeCH
Confidence 2235799999998
No 203
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.90 E-value=4.6e-24 Score=217.72 Aligned_cols=147 Identities=28% Similarity=0.412 Sum_probs=129.3
Q ss_pred hcccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhcCCCccceeeeeeccC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE 493 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~ 493 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..+
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 35689999999999999999862 1345799999999999999999999999
Q ss_pred CeeEEEEecCCCC-CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccc
Q 036342 494 EFKALVLEYMPHG-SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572 (596)
Q Consensus 494 ~~~~lV~e~~~~g-~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla 572 (596)
+..++||||+.+| +|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999777 9999987654 5899999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... .....+||+.|+||
T Consensus 178 ~~~~~~~---~~~~~~gt~~y~aP 198 (335)
T 3dls_A 178 AYLERGK---LFYTFCGTIEYCAP 198 (335)
T ss_dssp EECCTTC---CBCEECSCGGGCCH
T ss_pred eECCCCC---ceeccCCCccccCh
Confidence 8764332 22346799999998
No 204
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.90 E-value=8.8e-24 Score=212.14 Aligned_cols=151 Identities=28% Similarity=0.435 Sum_probs=124.7
Q ss_pred cccccccccccCCCceeehhhH----------------HhHHHHHHHHhh--cCCCccceeeeeecc----CCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKS--IRHRNLIKVISSCSN----EEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~--l~H~niv~l~~~~~~----~~~~~lV~e 501 (596)
.++|+..+.||+|+||.||+|. +.+..|.+++.. ++||||+++++++.. .+..|+|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e 86 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITH 86 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehh
Confidence 4689999999999999999862 345567777766 899999999998654 346899999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+++|+|.++++.. .+++..+..++.|++.|++|||.. ..++|+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~ 164 (301)
T 3q4u_A 87 YHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHS 164 (301)
T ss_dssp CCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred hccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeecc
Confidence 99999999999654 588999999999999999999942 26789999999999999999999999999998764
Q ss_pred CCCCcc--ccccccccccccCC
Q 036342 577 GEDQSM--TQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~--~~~~~~gt~~y~aP 596 (596)
...... ......||+.|+||
T Consensus 165 ~~~~~~~~~~~~~~gt~~y~aP 186 (301)
T 3q4u_A 165 QSTNQLDVGNNPRVGTKRYMAP 186 (301)
T ss_dssp TTTTEEECCCCCCCCCGGGCCH
T ss_pred cccccccccccccccccceeCh
Confidence 332211 12334799999998
No 205
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.90 E-value=1.7e-24 Score=219.81 Aligned_cols=153 Identities=25% Similarity=0.428 Sum_probs=117.5
Q ss_pred HHhcccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCC
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE 494 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 494 (596)
....++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3456789999999999999999752 35778999999999999999999998766
Q ss_pred ee------EEEEecCCCCCHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc
Q 036342 495 FK------ALVLEYMPHGSLEKYLYSSN-----CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV 563 (596)
Q Consensus 495 ~~------~lV~e~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~ 563 (596)
.. ++||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCC
Confidence 54 99999999999999986532 25889999999999999999999 889999999999999999999
Q ss_pred EEEeccccccccCCCCCccccccccccccccCC
Q 036342 564 AHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 564 ~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+||+|||+++...............+|+.|+||
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 208 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCH
T ss_pred EEEeeccccccccccccccccccccCcccccCc
Confidence 999999999876433322223345678889998
No 206
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.90 E-value=1.5e-24 Score=218.97 Aligned_cols=149 Identities=22% Similarity=0.436 Sum_probs=120.1
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCC----e
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE----F 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~----~ 495 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++|||||++++++...+ .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 4689999999999999999752 35778999999999999999999987654 3
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||+++|+|.+++.... .+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 499999999999999998654 5889999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCc-cccccccccccccCC
Q 036342 576 TGEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~-~~~~~~~gt~~y~aP 596 (596)
...... .......||+.|+||
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aP 188 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSP 188 (311)
T ss_dssp ---------------CCTTCCH
T ss_pred cccccccccccccCcCcccCCH
Confidence 433221 122345799999998
No 207
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=3.7e-24 Score=221.53 Aligned_cols=149 Identities=25% Similarity=0.412 Sum_probs=117.7
Q ss_pred ccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeecc-CCeeEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSN-EEFKAL 498 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~-~~~~~l 498 (596)
..|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.. ++..|+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 356778899999999999742 457889999999999999999998754 567899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++......+++.++..++.|+++|+.||| +.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999999877667889999999999999999999 889999999999999999999999999999865432
Q ss_pred CC--ccccccccccccccCC
Q 036342 579 DQ--SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~--~~~~~~~~gt~~y~aP 596 (596)
.. ........+|+.|+||
T Consensus 246 ~~~~~~~~~~~~~~~~y~aP 265 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMAL 265 (373)
T ss_dssp ------------CCGGGSCH
T ss_pred ccccccccCCCCCcccccCh
Confidence 21 1112345678899998
No 208
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.90 E-value=6.4e-24 Score=211.63 Aligned_cols=146 Identities=30% Similarity=0.439 Sum_probs=123.8
Q ss_pred ccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
++|...+.||+|+||.||++. +.+.+|++++++++||||+++++++...+..|+||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 578999999999999999742 4578999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccC
Q 036342 503 MPHGSLEKYLYSS---NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 503 ~~~g~L~~~l~~~---~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~ 576 (596)
+++|+|.+++... ...+++..+..++.|+++|+.||| ..+|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 246899999999999999999999 8899999999999999 456889999999998654
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
... ......||+.|+||
T Consensus 179 ~~~---~~~~~~~t~~y~aP 195 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAP 195 (285)
T ss_dssp -----------CTTGGGCCH
T ss_pred Ccc---cCcCcccccCcCCh
Confidence 321 23346799999998
No 209
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.89 E-value=8.8e-24 Score=224.49 Aligned_cols=147 Identities=31% Similarity=0.445 Sum_probs=126.7
Q ss_pred HhcccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeeccCC-eeEEEEecC
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSNEE-FKALVLEYM 503 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~-~~~lV~e~~ 503 (596)
...++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++...+ ..|+|||||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 345789999999999999999852 56889999999999999999999987654 799999999
Q ss_pred CCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 504 PHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 504 ~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
++|+|.+++..... .+++..+..++.|+++|++||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---- 342 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST---- 342 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc----
Confidence 99999999987653 3689999999999999999999 889999999999999999999999999999864321
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
.....+|+.|+||
T Consensus 343 -~~~~~~~~~y~aP 355 (450)
T 1k9a_A 343 -QDTGKLPVKWTAP 355 (450)
T ss_dssp -----CCCTTTSCH
T ss_pred -ccCCCCCcceeCH
Confidence 1223678899998
No 210
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.89 E-value=4.2e-24 Score=216.04 Aligned_cols=160 Identities=24% Similarity=0.412 Sum_probs=135.3
Q ss_pred ccCHHHHHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc-CCCccce
Q 036342 434 TFSYLELCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI-RHRNLIK 485 (596)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l-~H~niv~ 485 (596)
.+....+....++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||++
T Consensus 16 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~ 95 (316)
T 2xir_A 16 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN 95 (316)
T ss_dssp CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred cccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeee
Confidence 34555666677899999999999999999752 3467899999999 7999999
Q ss_pred eeeeeccCC-eeEEEEecCCCCCHHHHHhhCCCC---------------CCHHHHHHHHHHHHHHHHHHhccCCCceEeC
Q 036342 486 VISSCSNEE-FKALVLEYMPHGSLEKYLYSSNCI---------------LDIFQRLNIMIDVASALEYLHFGYSALVIHC 549 (596)
Q Consensus 486 l~~~~~~~~-~~~lV~e~~~~g~L~~~l~~~~~~---------------l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hr 549 (596)
+++++...+ ..++||||+++|+|.+++...... +++..+..++.|++.|+.||| ..+|+||
T Consensus 96 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~ 172 (316)
T 2xir_A 96 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHR 172 (316)
T ss_dssp EEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCS
T ss_pred EEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccc
Confidence 999987654 589999999999999999875422 788999999999999999999 8899999
Q ss_pred CCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 550 DLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 550 dlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||||+||+++.++.+||+|||+++...............||+.|+||
T Consensus 173 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (316)
T 2xir_A 173 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219 (316)
T ss_dssp CCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred cCccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc
Confidence 99999999999999999999999876443332333445788999998
No 211
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.89 E-value=2.6e-24 Score=214.67 Aligned_cols=154 Identities=26% Similarity=0.456 Sum_probs=133.5
Q ss_pred HHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
+++...++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 86 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence 334456789999999999999999852 467899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 499 VLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 999999999999998743 45889999999999999999999 88999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ........+|+.|+||
T Consensus 164 ~~-~~~~~~~~~~~~y~aP 181 (288)
T 3kfa_A 164 DT-YTAHAGAKFPIKWTAP 181 (288)
T ss_dssp SS-SEEETTEEECGGGCCH
T ss_pred Cc-cccccCCccccCcCCh
Confidence 32 2223345678889998
No 212
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.89 E-value=9.1e-24 Score=220.29 Aligned_cols=150 Identities=17% Similarity=0.215 Sum_probs=129.3
Q ss_pred cccccccccccCC--CceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRG--GFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G--~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
.++|+..+.||+| +||.||+|. +.+.+|+.++++++|||||++++++..++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4689999999999 999999852 356789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 499 VLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
|||||++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998752 46899999999999999999999 88999999999999999999999999998875432
Q ss_pred CCC-----ccccccccccccccCC
Q 036342 578 EDQ-----SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~-----~~~~~~~~gt~~y~aP 596 (596)
... .......+||+.|+||
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aP 204 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSP 204 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCH
T ss_pred ccccccccccccccccccccccCH
Confidence 111 1112234789999998
No 213
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.89 E-value=7.9e-24 Score=220.65 Aligned_cols=148 Identities=21% Similarity=0.419 Sum_probs=116.8
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcC-CCccceeeeeeccCC--ee
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIR-HRNLIKVISSCSNEE--FK 496 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~-H~niv~l~~~~~~~~--~~ 496 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.+++++. |||||++++++..++ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 45689999999999999999852 34668999999997 999999999997544 68
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+|||||+ |+|.+++... .+++..+..++.|+++|++||| +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999997 6999999764 5789999999999999999999 8999999999999999999999999999998653
Q ss_pred CCC-------------------CccccccccccccccCC
Q 036342 577 GED-------------------QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~-------------------~~~~~~~~~gt~~y~aP 596 (596)
... ........+||++|+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCH
Confidence 211 01122346899999998
No 214
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.89 E-value=5.2e-24 Score=220.02 Aligned_cols=150 Identities=20% Similarity=0.266 Sum_probs=122.7
Q ss_pred hcccccccccccCCCceeehhhH----------------------HhH---------------HHHHHHHhhcCCCccce
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF----------------------KSF---------------DVECEMMKSIRHRNLIK 485 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~---------------~~e~~~l~~l~H~niv~ 485 (596)
..++|...+.||+|+||.||+|. ..+ ..|+..++.++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999861 112 23445566778999999
Q ss_pred eeeeeccC----CeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC--
Q 036342 486 VISSCSNE----EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-- 559 (596)
Q Consensus 486 l~~~~~~~----~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~-- 559 (596)
+++++... ...|+||||+ +|+|.+++......+++..+..++.|++.||.||| ..+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99998764 4589999999 99999999887667999999999999999999999 88999999999999998
Q ss_pred CCCcEEEeccccccccCCCCCc-----cccccccccccccCC
Q 036342 560 DNMVAHLSDFSIAKLLTGEDQS-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 560 ~~~~~kl~dfGla~~~~~~~~~-----~~~~~~~gt~~y~aP 596 (596)
.++.+||+|||+++.+...... ......+||+.||||
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 230 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI 230 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence 8899999999999876432111 112335699999998
No 215
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.89 E-value=2.6e-24 Score=228.94 Aligned_cols=153 Identities=22% Similarity=0.402 Sum_probs=129.6
Q ss_pred HHHHhcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
+++...++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++. ++..|+|
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344556789999999999999999862 46889999999999999999999987 5578999
Q ss_pred EecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 500 LEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||++|+|.++++... ..+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 99999999999997543 35788899999999999999999 889999999999999999999999999999876422
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
.........+|+.|+||
T Consensus 338 -~~~~~~~~~~~~~y~aP 354 (454)
T 1qcf_A 338 -EYTAREGAKFPIKWTAP 354 (454)
T ss_dssp -HHHTTCSSSSCGGGSCH
T ss_pred -ceeccCCCcccccccCH
Confidence 11112334567889998
No 216
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=7.6e-24 Score=215.99 Aligned_cols=150 Identities=25% Similarity=0.471 Sum_probs=123.1
Q ss_pred cccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
..+|...+.||+|+||.||+|. ..+.+|+.++++++||||+++++++...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3467788999999999999852 34678999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++.+++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999877667899999999999999999999 88999999999999999999999999999987643
Q ss_pred CCC-ccccccccccccccCC
Q 036342 578 EDQ-SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~-~~~~~~~~gt~~y~aP 596 (596)
... ........+|+.|+||
T Consensus 200 ~~~~~~~~~~~~~~~~y~aP 219 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAP 219 (333)
T ss_dssp -----------CCCGGGSCH
T ss_pred ccccccccCCCCccccccCc
Confidence 221 1112234568889998
No 217
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.89 E-value=1.1e-23 Score=226.75 Aligned_cols=146 Identities=23% Similarity=0.416 Sum_probs=124.9
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.+.|...+.||+|+||.||+|. ..+.+|+.++++++|||||+++++|..++..|+||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 3579999999999999999752 34778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~dfGla~~~~~ 577 (596)
|||++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++. ++.+||+|||+++....
T Consensus 116 e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999999887654 5889999999999999999999 889999999999999976 45699999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. .....+||++|+||
T Consensus 192 ~~---~~~~~~gt~~y~aP 207 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAP 207 (494)
T ss_dssp TB---CBCCCCSCTTTCCH
T ss_pred Cc---cccccCCCcCeeCH
Confidence 21 23446799999998
No 218
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.89 E-value=1.7e-23 Score=209.50 Aligned_cols=147 Identities=23% Similarity=0.398 Sum_probs=129.3
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 4689999999999999999742 3467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++++|.+++.... .+++.++..++.|+++|+.||| ..+++||||||+||+++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999999987654 5889999999999999999999 8899999999999999999999999999998754222
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 170 --~~~~~~~~~~~y~aP 184 (294)
T 2rku_A 170 --ERKKVLCGTPNYIAP 184 (294)
T ss_dssp --CCBCCCCSCCSSCCH
T ss_pred --cccccccCCCCcCCc
Confidence 123346799999998
No 219
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.89 E-value=1.5e-23 Score=213.98 Aligned_cols=147 Identities=23% Similarity=0.406 Sum_probs=129.7
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||++. +.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4689999999999999999742 3567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++++|.+++.... .+++.++..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999999987653 5889999999999999999999 8899999999999999999999999999998764222
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
. ......||+.|+||
T Consensus 196 ~--~~~~~~gt~~y~aP 210 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAP 210 (335)
T ss_dssp C--CBCCCCSCCSSCCH
T ss_pred c--cccccCCCccccCH
Confidence 1 23346799999998
No 220
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.89 E-value=3.4e-24 Score=217.70 Aligned_cols=146 Identities=24% Similarity=0.420 Sum_probs=122.9
Q ss_pred ccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
++|...+.||+|+||.||+|. ..+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 578999999999999999863 1234699999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSM 582 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~ 582 (596)
++ |+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999999887767899999999999999999999 8999999999999999999999999999998654221 1
Q ss_pred ccccccccccccCC
Q 036342 583 TQTQTLGTIGYMAP 596 (596)
Q Consensus 583 ~~~~~~gt~~y~aP 596 (596)
......||++|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 156 TYDNEVVTLWYRPP 169 (324)
T ss_dssp -------CGGGCCH
T ss_pred ccccccCcccccCh
Confidence 23345789999998
No 221
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.89 E-value=9.3e-24 Score=213.09 Aligned_cols=146 Identities=26% Similarity=0.397 Sum_probs=122.9
Q ss_pred ccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 445 DEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 579999999999999999852 346789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++++|.+++... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999998887654 35889999999999999999999 88999999999999999999999999999987643221
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......||++|+||
T Consensus 158 -~~~~~~~~~~y~aP 171 (311)
T 4agu_A 158 -YYDDEVATRWYRSP 171 (311)
T ss_dssp ---------GGGCCH
T ss_pred -ccCCCcCCccccCh
Confidence 22345789999998
No 222
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=9.2e-24 Score=211.65 Aligned_cols=148 Identities=22% Similarity=0.375 Sum_probs=126.2
Q ss_pred cccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee-EEE
Q 036342 446 EFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK-ALV 499 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~-~lV 499 (596)
.|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 45667899999999999752 4577899999999999999999999876654 999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+.+|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999886667899999999999999999999 8899999999999999999999999999998653321
Q ss_pred C--ccccccccccccccCC
Q 036342 580 Q--SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~--~~~~~~~~gt~~y~aP 596 (596)
. ........+|+.|+||
T Consensus 179 ~~~~~~~~~~~~~~~y~aP 197 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTAL 197 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCH
T ss_pred ccccccCcCCCCCccccCh
Confidence 1 1122345688899987
No 223
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.89 E-value=2.5e-23 Score=207.39 Aligned_cols=143 Identities=27% Similarity=0.524 Sum_probs=125.9
Q ss_pred cccccccccccCCCceeehhhH----------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 4689999999999999999741 45788999999999999999999997765
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeCCCCc-----EEEec
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLDDNMV-----AHLSD 568 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~~~~~-----~kl~d 568 (596)
++||||+++|+|.+++......+++..+..++.|++.|++||| ..+ |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 7999999999999999877777899999999999999999999 888 999999999999988776 99999
Q ss_pred cccccccCCCCCccccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||+++.... ......||+.|+||
T Consensus 173 fg~~~~~~~-----~~~~~~g~~~y~aP 195 (287)
T 4f0f_A 173 FGLSQQSVH-----SVSGLLGNFQWMAP 195 (287)
T ss_dssp CTTCBCCSS-----CEECCCCCCTTSCG
T ss_pred CCccccccc-----cccccCCCccccCc
Confidence 999985432 23346799999998
No 224
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.89 E-value=8.6e-24 Score=209.41 Aligned_cols=149 Identities=23% Similarity=0.376 Sum_probs=129.9
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 4689999999999999999852 457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++|+|.+++... ..+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+++........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999998754 35889999999999999999999 889999999999999999999999999999865432222
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 162 ~~~~~~~~~~~y~aP 176 (276)
T 2yex_A 162 RLLNKMCGTLPYVAP 176 (276)
T ss_dssp CCBCCCCSCGGGCCG
T ss_pred hcccCCccccCccCh
Confidence 223446789999998
No 225
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.89 E-value=1.5e-23 Score=212.76 Aligned_cols=146 Identities=25% Similarity=0.423 Sum_probs=129.1
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 4679999999999999999852 3478999999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC----cEEEeccccc
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIA 572 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~----~~kl~dfGla 572 (596)
|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999999997653 5789999999999999999999 88999999999999999887 7999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... ......||+.|+||
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aP 187 (321)
T 2a2a_A 167 HEIEDGV---EFKNIFGTPEFVAP 187 (321)
T ss_dssp EECCTTC---CCCCCCSCGGGCCH
T ss_pred eecCccc---cccccCCCCCccCc
Confidence 8764322 22345799999998
No 226
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.89 E-value=9.2e-24 Score=216.35 Aligned_cols=147 Identities=23% Similarity=0.431 Sum_probs=122.7
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCC--CccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRH--RNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H--~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++| |||+++++++..++..|+|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4579999999999999999751 457789999999987 9999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|| +.+|+|.+++.... .+++.++..++.|++.|+.||| ..+|+||||||+|||++ ++.+||+|||+++......
T Consensus 88 ~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 45889999998764 6889999999999999999999 88999999999999997 5789999999998765433
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
........+||++|+||
T Consensus 162 ~~~~~~~~~gt~~y~aP 178 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPP 178 (343)
T ss_dssp --------CCCCSSCCH
T ss_pred ccccCCCCcCCcCcCCH
Confidence 22233456899999998
No 227
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.89 E-value=8e-24 Score=208.54 Aligned_cols=149 Identities=30% Similarity=0.501 Sum_probs=130.6
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMP 504 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~ 504 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..|+||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 4688999999999999999852 467899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcccc
Q 036342 505 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584 (596)
Q Consensus 505 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~ 584 (596)
+|+|.+++......+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+++..... .....
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-QYTSS 162 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-HHHST
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccc-ccccc
Confidence 99999999887667899999999999999999999 889999999999999999999999999999865321 11122
Q ss_pred ccccccccccCC
Q 036342 585 TQTLGTIGYMAP 596 (596)
Q Consensus 585 ~~~~gt~~y~aP 596 (596)
....+|+.|+||
T Consensus 163 ~~~~~~~~y~aP 174 (267)
T 3t9t_A 163 TGTKFPVKWASP 174 (267)
T ss_dssp TSTTCCGGGCCH
T ss_pred ccccccccccCh
Confidence 334678889998
No 228
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=7.9e-24 Score=217.12 Aligned_cols=149 Identities=28% Similarity=0.471 Sum_probs=126.4
Q ss_pred HhcccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
...++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 345789999999999999999852 246689999999999999999999999999
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.++||||+++ +|.+++......+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999976 899999877667888899999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
..... .....+||+.|+||
T Consensus 163 ~~~~~--~~~~~~~t~~y~aP 181 (346)
T 1ua2_A 163 GSPNR--AYTHQVVTRWYRAP 181 (346)
T ss_dssp TSCCC--CCCCSCCCCTTCCH
T ss_pred cCCcc--cCCcccccccccCc
Confidence 43221 23346799999998
No 229
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.89 E-value=7.4e-24 Score=217.13 Aligned_cols=153 Identities=27% Similarity=0.398 Sum_probs=124.9
Q ss_pred HHhcccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccCC
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE 494 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 494 (596)
....++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 4456789999999999999999751 35678999999999999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhC---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 036342 495 FKALVLEYMPHGSLEKYLYSS---------------------------------------NCILDIFQRLNIMIDVASAL 535 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~---------------------------------------~~~l~~~~~~~i~~~i~~~l 535 (596)
..++||||+++|+|.+++... ...+++..+..++.|++.|+
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998521 11235667888999999999
Q ss_pred HHHhccCCCceEeCCCCCCCeeeCCCC--cEEEeccccccccCCCCC--ccccccccccccccCC
Q 036342 536 EYLHFGYSALVIHCDLKPSNVLLDDNM--VAHLSDFSIAKLLTGEDQ--SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 536 ~~lh~~~~~~i~Hrdlk~~NILl~~~~--~~kl~dfGla~~~~~~~~--~~~~~~~~gt~~y~aP 596 (596)
+||| ..+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+||
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 9999 88999999999999998766 899999999986533211 1123456799999998
No 230
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.89 E-value=1.4e-23 Score=225.45 Aligned_cols=146 Identities=23% Similarity=0.418 Sum_probs=127.3
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|...+.||+|+||.||+|. ..+.+|+.++++++|||||++++++...+..|+||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 3579999999999999999852 35778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC---CCCcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD---DNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~---~~~~~kl~dfGla~~~~~ 577 (596)
|||++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999999987654 5889999999999999999999 88999999999999995 456899999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. .....+||++|+||
T Consensus 177 ~~---~~~~~~gt~~y~aP 192 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAP 192 (486)
T ss_dssp C-------CCTTGGGGCCG
T ss_pred CC---ccCCCcCCCCCCCH
Confidence 21 23446799999998
No 231
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=9.6e-24 Score=217.69 Aligned_cols=157 Identities=26% Similarity=0.353 Sum_probs=135.6
Q ss_pred cccccCHHHHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcC-----CCccce
Q 036342 431 TWRTFSYLELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIR-----HRNLIK 485 (596)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~-----H~niv~ 485 (596)
+...+++.+.....++|...+.||+|+||.||+|. +.+..|+.++++++ |||||+
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 44556666666778899999999999999999852 34667999999987 999999
Q ss_pred eeeeeccCCeeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC----
Q 036342 486 VISSCSNEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---- 560 (596)
Q Consensus 486 l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---- 560 (596)
+++++...+..|+||||+ +++|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+|||++.
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~ 176 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFE 176 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCC
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccc
Confidence 999999999999999999 999999998754 35889999999999999999999 899999999999999975
Q ss_pred ---------------------CCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 561 ---------------------NMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 561 ---------------------~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++.+||+|||+++..... .....||+.|+||
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aP 228 (360)
T 3llt_A 177 KSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAP 228 (360)
T ss_dssp EEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCH
T ss_pred ccccchhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCc
Confidence 789999999999865322 2345799999998
No 232
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=5.1e-24 Score=219.25 Aligned_cols=148 Identities=25% Similarity=0.350 Sum_probs=128.7
Q ss_pred cccccccccccCCCceeehhhH----------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEE 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~ 494 (596)
.++|+..+.||+|+||.||++. +.+.+|+++++++ +||||+++++++..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 4689999999999999999642 2355799999999 6999999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
..|+||||+++|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 9999999999999999998754 5889999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
..... .......+||+.|+||
T Consensus 209 ~~~~~-~~~~~~~~gt~~y~aP 229 (355)
T 1vzo_A 209 FVADE-TERAYDFCGTIEYMAP 229 (355)
T ss_dssp CCGGG-GGGGCGGGSCCTTCCH
T ss_pred cccCC-CCcccCcccCcCccCh
Confidence 53221 2223346799999998
No 233
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.89 E-value=2.5e-23 Score=208.46 Aligned_cols=149 Identities=17% Similarity=0.227 Sum_probs=130.5
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.+++++ +|++++++++++..+...++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 4579999999999999999863 3578999999999 8999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc-----EEEeccccccccCCC
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV-----AHLSDFSIAKLLTGE 578 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~-----~kl~dfGla~~~~~~ 578 (596)
+|+|.+++......+++..+..++.|++.|+.||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999999877667899999999999999999999 999999999999999987766 999999999876543
Q ss_pred CCc-----cccccccccccccCC
Q 036342 579 DQS-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~-----~~~~~~~gt~~y~aP 596 (596)
... .......||+.|+||
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aP 187 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSI 187 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred cccccccccCccCCCCCcccCCc
Confidence 221 123446799999998
No 234
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.89 E-value=2.4e-23 Score=207.15 Aligned_cols=146 Identities=23% Similarity=0.481 Sum_probs=128.0
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 4689999999999999999852 35678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc---EEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV---AHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~---~kl~dfGla~~~~~ 577 (596)
||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999999887654 5889999999999999999999 889999999999999986654 99999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ......||+.|+||
T Consensus 161 ~~---~~~~~~~~~~y~aP 176 (284)
T 3kk8_A 161 SE---AWHGFAGTPGYLSP 176 (284)
T ss_dssp SC---BCCCSCSCGGGCCH
T ss_pred Cc---cccCCCCCcCCcCc
Confidence 22 22346799999998
No 235
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.89 E-value=1.4e-23 Score=218.58 Aligned_cols=146 Identities=23% Similarity=0.428 Sum_probs=123.3
Q ss_pred ccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcC--CCccceeeeeeccCCeeEEEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIR--HRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~--H~niv~l~~~~~~~~~~~lV~ 500 (596)
++|+..+.||+|+||.||++. +.+.+|+.++++++ |||||++++++..++..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 469999999999999999852 45789999999997 599999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
| +.+|+|.+++.... .+++..+..++.|++.||.||| ..+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 56889999998764 6788899999999999999999 89999999999999995 58999999999987643322
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.......+||+.|+||
T Consensus 210 ~~~~~~~~gt~~y~aP 225 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPP 225 (390)
T ss_dssp ----CCSCCCGGGCCH
T ss_pred cccCCCCCcCCCccCh
Confidence 2223456899999998
No 236
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.89 E-value=1.4e-23 Score=207.91 Aligned_cols=145 Identities=25% Similarity=0.478 Sum_probs=110.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 3589999999999999999852 3577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+ ++++.+++.... .+++..+..++.|++.|+.||| ..+++||||||+||++++++.+||+|||+++......
T Consensus 92 ~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 778988887654 5889999999999999999999 8899999999999999999999999999998654321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.....+||+.|+||
T Consensus 167 ---~~~~~~~t~~y~aP 180 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTCCH
T ss_pred ---cccCCCCCcCcCCc
Confidence 22345799999998
No 237
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.89 E-value=8.9e-24 Score=220.78 Aligned_cols=147 Identities=26% Similarity=0.420 Sum_probs=127.2
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC--eeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE--FKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|++++++++|||||++++++...+ ..|+|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 3579999999999999999852 34678999999999999999999987654 68999
Q ss_pred EecCCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee----CCCCcEEEecccccc
Q 036342 500 LEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL----DDNMVAHLSDFSIAK 573 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl----~~~~~~kl~dfGla~ 573 (596)
|||+++|+|.+++.... ..+++..++.++.|++.|+.||| ..+|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999997643 23899999999999999999999 8899999999999999 778889999999998
Q ss_pred ccCCCCCccccccccccccccCC
Q 036342 574 LLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
...... ......||+.|+||
T Consensus 165 ~~~~~~---~~~~~~gt~~y~aP 184 (396)
T 4eut_A 165 ELEDDE---QFVSLYGTEEYLHP 184 (396)
T ss_dssp ECCCGG---GSSCSSSCCTTCCH
T ss_pred EccCCC---ccccccCCccccCH
Confidence 764321 22346799999998
No 238
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=2.5e-23 Score=212.35 Aligned_cols=150 Identities=26% Similarity=0.403 Sum_probs=123.8
Q ss_pred HhcccccccccccCCCceeehhhH----------------HhHHHHHHHHhhc--CCCccceeeeeeccC----CeeEEE
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKSI--RHRNLIKVISSCSNE----EFKALV 499 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~l--~H~niv~l~~~~~~~----~~~~lV 499 (596)
...++|+..+.||+|+||.||+|. ..+..|.+++... +||||+++++++... ...|+|
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 113 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLI 113 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEE
T ss_pred ccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEE
Confidence 345689999999999999999852 2345566666554 999999999999876 678999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCC--------ceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA--------LVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~--------~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
|||+++|+|.++++.. .+++..++.++.|++.|++||| .. +|+||||||+||+++.++.+||+|||+
T Consensus 114 ~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 114 TDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp ECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 9999999999999765 4889999999999999999999 66 999999999999999999999999999
Q ss_pred ccccCCCCCc--cccccccccccccCC
Q 036342 572 AKLLTGEDQS--MTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~--~~~~~~~gt~~y~aP 596 (596)
++........ ......+||+.|+||
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aP 215 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPP 215 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCH
T ss_pred ceeeccccccccCCCCCCccCcceeCh
Confidence 9876432221 112345799999998
No 239
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.89 E-value=1e-23 Score=220.31 Aligned_cols=147 Identities=24% Similarity=0.394 Sum_probs=117.6
Q ss_pred ccccccc-ccccCCCceeehhhH----------------HhHHHHHHHH-hhcCCCccceeeeeecc----CCeeEEEEe
Q 036342 444 TDEFSEN-NLIGRGGFALFIRAF----------------KSFDVECEMM-KSIRHRNLIKVISSCSN----EEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~-~~ig~G~~g~v~~~~----------------~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~e 501 (596)
.++|... +.||+|+||.||++. ..+.+|+.++ +..+|||||++++++.. ++..|+|||
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E 139 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence 3466665 689999999999863 3567888887 45589999999998865 567899999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEeccccccccCC
Q 036342 502 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~dfGla~~~~~ 577 (596)
||++|+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+|||++. ++.+||+|||+++....
T Consensus 140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999999998754 35899999999999999999999 889999999999999997 78999999999987542
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. .....+||+.|+||
T Consensus 217 ~~---~~~~~~gt~~y~aP 232 (400)
T 1nxk_A 217 HN---SLTTPCYTPYYVAP 232 (400)
T ss_dssp -------------CTTCCG
T ss_pred CC---ccccCCCCCCccCH
Confidence 21 23456899999998
No 240
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.89 E-value=9.3e-24 Score=222.16 Aligned_cols=146 Identities=29% Similarity=0.404 Sum_probs=119.6
Q ss_pred hcccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhcCCCccceeeeeeccC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE 493 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~ 493 (596)
..++|...+.||+|+||.||+|. ..+.+|+.++++++|||||++++++..+
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 45689999999999999999852 1367899999999999999999998654
Q ss_pred CeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC---CcEEEeccc
Q 036342 494 EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFS 570 (596)
Q Consensus 494 ~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~---~~~kl~dfG 570 (596)
..|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+|||++.+ +.+||+|||
T Consensus 213 -~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 213 -DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp -EEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred -ceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 5799999999999999987654 6889999999999999999999 8899999999999999654 469999999
Q ss_pred cccccCCCCCccccccccccccccCC
Q 036342 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+++..... ......+||+.|+||
T Consensus 288 ~a~~~~~~---~~~~~~~gt~~y~aP 310 (419)
T 3i6u_A 288 HSKILGET---SLMRTLCGTPTYLAP 310 (419)
T ss_dssp TTTSCC--------------CTTCCT
T ss_pred cceecCCC---ccccccCCCCCccCc
Confidence 99876432 123456899999998
No 241
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.89 E-value=2.6e-23 Score=207.04 Aligned_cols=145 Identities=28% Similarity=0.441 Sum_probs=128.8
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 4689999999999999999852 3467899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++|+|.+++.... .+++..+..++.|+++|+.||| ..+++||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999998754 5789999999999999999999 899999999999999999999999999998765322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 168 ---~~~~~~~~~~y~aP 181 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPP 181 (284)
T ss_dssp ---CBCCCCSCGGGCCH
T ss_pred ---ccccccCCCCcCCH
Confidence 12345789999998
No 242
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.89 E-value=1.7e-23 Score=212.91 Aligned_cols=150 Identities=24% Similarity=0.404 Sum_probs=129.1
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeec--cCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCS--NEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 496 (596)
.++|+..+.||+|+||.||++. +.+.+|++++++++||||+++++++. .++..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 4689999999999999998752 34789999999999999999999886 45568
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+||||+++|+|.+++......+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 9999999999999999875556899999999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......||+.|+||
T Consensus 179 ~~~~~~~~~~~~~~~~~y~aP 199 (327)
T 3lxl_A 179 LDKDYYVVREPGQSPIFWYAP 199 (327)
T ss_dssp TTCSEEECSSCCCSCGGGSCH
T ss_pred cCCccceeeccCCccccccCH
Confidence 33221 122345688889998
No 243
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.89 E-value=1.6e-23 Score=206.70 Aligned_cols=143 Identities=20% Similarity=0.381 Sum_probs=126.2
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccC--CeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNE--EFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 500 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++... +..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 4689999999999999999852 4578999999999999999999999876 6789999
Q ss_pred ecCCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
||+++|+|.+++..... .+++.++..++.|++.|+.||| ..+ ++||||||+||+++.++.++++|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 99999999999987653 5899999999999999999999 777 9999999999999999999999999876432
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.....||+.|+||
T Consensus 165 ------~~~~~~t~~y~aP 177 (271)
T 3kmu_A 165 ------SPGRMYAPAWVAP 177 (271)
T ss_dssp ------CTTCBSCGGGSCH
T ss_pred ------ccCccCCccccCh
Confidence 1234689999998
No 244
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.89 E-value=2.8e-23 Score=224.04 Aligned_cols=146 Identities=25% Similarity=0.466 Sum_probs=126.7
Q ss_pred cccccccccccCCCceeehhhH----------------------------------HhHHHHHHHHhhcCCCccceeeee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------------------KSFDVECEMMKSIRHRNLIKVISS 489 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------------------~~~~~e~~~l~~l~H~niv~l~~~ 489 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 5689999999999999999742 236689999999999999999999
Q ss_pred eccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC---cEEE
Q 036342 490 CSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---VAHL 566 (596)
Q Consensus 490 ~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~---~~kl 566 (596)
+..++..|+|||||++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999999987654 5899999999999999999999 88999999999999998775 6999
Q ss_pred eccccccccCCCCCccccccccccccccCC
Q 036342 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 567 ~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+|||+++...... .....+||+.|+||
T Consensus 191 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 217 (504)
T 3q5i_A 191 VDFGLSSFFSKDY---KLRDRLGTAYYIAP 217 (504)
T ss_dssp CCCTTCEECCTTS---CBCCCCSCTTTCCH
T ss_pred EECCCCEEcCCCC---ccccccCCcCCCCH
Confidence 9999998764321 23446799999998
No 245
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.89 E-value=4.3e-25 Score=243.40 Aligned_cols=332 Identities=16% Similarity=0.133 Sum_probs=230.9
Q ss_pred CCCCCCEEECCCC-CCccc-cchhhhCCCCCCEEEccCCcCccccCc-c--CccCCCCccEEEccCCc--ccc-ccCccc
Q 036342 8 NLQNLEELQLGQN-KLIGT-VPAAIFNVSTLKFLGLQNNSLSGSLSS-I--ANVRLPNLEKLYLWGNN--FSG-TIPRFI 79 (596)
Q Consensus 8 ~l~~L~~L~Ls~n-~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~--~~~~l~~L~~L~L~~N~--l~~-~~~~~~ 79 (596)
.+++|++|+|++| .+++. .+..+..+++|++|+|++|.+++.... + ....+++|+.|+|++|. +.. .++..+
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~ 207 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLV 207 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHH
Confidence 5789999999998 55443 334445789999999999987643221 1 11246789999999886 221 112223
Q ss_pred cCCCCCCEEEccCC-cccccCCccccCCCCCCEEecCCCcC--------------------------cCCCCCccccccC
Q 036342 80 FNASKLSKLSLGMN-SFSGFIPSTFGNLRNLEQLGLDENYL--------------------------TSSTPELSFLSSL 132 (596)
Q Consensus 80 ~~l~~L~~L~L~~N-~i~~~~~~~~~~l~~L~~L~l~~N~l--------------------------~~~~~~~~~~~~~ 132 (596)
..+++|++|+|++| .+.+ ++..+..+++|++|+++.+.. ...... .++..+
T Consensus 208 ~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~ 285 (594)
T 2p1m_B 208 TRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPA-YLPAVY 285 (594)
T ss_dssp HHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGG-GGGGGH
T ss_pred HhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchh-hHHHHH
Confidence 45688999999988 4444 677777888888888665521 111100 122223
Q ss_pred CCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccc-cChhccCCCCCCEEEccC---------CcccCCC
Q 036342 133 SNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGG-IPEEISNLTNLVEIDLGG---------NKLNGSI 202 (596)
Q Consensus 133 ~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~---------N~l~~~~ 202 (596)
..+++|+.|++++|.+++......+..+ ++|++|++++| ++.. .+.....+++|++|++++ +.+++..
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~-~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQC-PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTC-TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcC-CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 3678999999999997654222223455 78999999999 5432 333334589999999943 5555433
Q ss_pred Ccccc-CCCCCCeEEccCCcccccCccchh-cCCCCcEEEcc--C----CcCcc-----cchhhhccCCCCcEEEeCCCc
Q 036342 203 PITLG-KLRKLQRLNLEDNILEGSIPDDIC-RLAELYRLELG--S----NKLYG-----SIPACFGNLASLRILSLGSNK 269 (596)
Q Consensus 203 p~~~~-~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~ 269 (596)
...+. ++++|+.|+++.|.+++.....+. .+++|+.|+++ + |.+++ .++..+..+++|+.|+|++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 33333 589999999999999876666665 58999999999 4 56652 2333477889999999987 5
Q ss_pred ccC-CCccccc-ccccceEEcccCCCCCchhhhh-ccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCcccc
Q 036342 270 LTS-IPLTFWN-LKDILQLNFSSNFLTGPLLLEI-GNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344 (596)
Q Consensus 270 l~~-ip~~~~~-l~~L~~L~ls~N~l~~~~~~~~-~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 344 (596)
++. .+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+++.........+++|+.|++++|+++.
T Consensus 443 l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~ 520 (594)
T 2p1m_B 443 LTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSF 520 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBH
T ss_pred ccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCH
Confidence 554 2333444 8899999999999987766665 6789999999999999654444355568999999999998853
No 246
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.89 E-value=1.5e-23 Score=210.38 Aligned_cols=150 Identities=25% Similarity=0.421 Sum_probs=123.2
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeecc-----------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSN----------- 492 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~----------- 492 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 4679999999999999999852 457789999999999999999998754
Q ss_pred --CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccc
Q 036342 493 --EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFS 570 (596)
Q Consensus 493 --~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfG 570 (596)
.+..|+||||+++|+|.+++......+++..++.++.|+++|++||| ..+|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 35689999999999999999877666788999999999999999999 8899999999999999999999999999
Q ss_pred cccccCCCCC------------ccccccccccccccCC
Q 036342 571 IAKLLTGEDQ------------SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~------------~~~~~~~~gt~~y~aP 596 (596)
+++....... ........||+.|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 199 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199 (303)
T ss_dssp CCSCTTC-------------------------CTTSCH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCc
Confidence 9986542210 1112345789999998
No 247
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.89 E-value=2.7e-23 Score=213.55 Aligned_cols=149 Identities=23% Similarity=0.390 Sum_probs=127.4
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeecc--------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSN-------- 492 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~-------- 492 (596)
.++|+..+.||+|+||.||+|. ..+.+|+.++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 4689999999999999999862 256789999999999999999999876
Q ss_pred CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccc
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIA 572 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla 572 (596)
.+..|+||||+++ ++.+.+......+++.++..++.|++.|+.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3468999999975 888888776667899999999999999999999 889999999999999999999999999999
Q ss_pred cccCCCCC--ccccccccccccccCC
Q 036342 573 KLLTGEDQ--SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~--~~~~~~~~gt~~y~aP 596 (596)
+.+..... ........||++|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPP 197 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred ccccccccccccccCCcccccCccCc
Confidence 87642211 1123446789999998
No 248
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.89 E-value=1.1e-23 Score=229.09 Aligned_cols=123 Identities=20% Similarity=0.165 Sum_probs=107.6
Q ss_pred HHhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCC
Q 036342 465 FKSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYS 543 (596)
Q Consensus 465 ~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~ 543 (596)
.+.+.+|+++|+++ .|+||+++++++++++..||||||++||+|.+.+...+ .++.. +|+.||+.||+|+| +
T Consensus 285 ~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~ 357 (569)
T 4azs_A 285 KYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---K 357 (569)
T ss_dssp HHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---H
T ss_pred HHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---H
Confidence 46789999999999 79999999999999999999999999999999998764 45553 48999999999999 9
Q ss_pred CceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 544 ALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 544 ~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++||||||||+|||++++|.+||+|||+|+...... ......+||++||||
T Consensus 358 ~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~t~vGTp~YmAP 408 (569)
T 4azs_A 358 QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPTNLVQSFFVFVN 408 (569)
T ss_dssp TTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSHHHHHHHHHHHH
T ss_pred CCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--ccccCceechhhccH
Confidence 999999999999999999999999999999764332 223457899999997
No 249
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.89 E-value=2.5e-23 Score=209.71 Aligned_cols=146 Identities=29% Similarity=0.471 Sum_probs=118.7
Q ss_pred cccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCCCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPHG 506 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~g 506 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++.+. .|+||||+++|
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~--~~lv~e~~~~~ 84 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGG 84 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTT--TEEEEECCTTC
T ss_pred HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC--cEEEEEcCCCC
Confidence 3578999999999999999852 4678999999999999999999998743 79999999999
Q ss_pred CHHHHHhhCCC--CCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc-EEEeccccccccCCCCCccc
Q 036342 507 SLEKYLYSSNC--ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV-AHLSDFSIAKLLTGEDQSMT 583 (596)
Q Consensus 507 ~L~~~l~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~-~kl~dfGla~~~~~~~~~~~ 583 (596)
+|.+++..... .+++..++.++.|+++|+.|||..+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~----- 159 (307)
T 2eva_A 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH----- 159 (307)
T ss_dssp BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----
Confidence 99999986542 4678899999999999999999433389999999999999988876 799999999865321
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
.....||+.|+||
T Consensus 160 ~~~~~gt~~y~aP 172 (307)
T 2eva_A 160 MTNNKGSAAWMAP 172 (307)
T ss_dssp -----CCTTSSCH
T ss_pred cccCCCCCceECh
Confidence 2234689999998
No 250
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.89 E-value=1.3e-23 Score=225.55 Aligned_cols=146 Identities=25% Similarity=0.451 Sum_probs=129.3
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++...+..|+|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 4579999999999999999742 3578999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~ 576 (596)
|||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++ +.++.+||+|||+++...
T Consensus 105 ~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999999987654 5889999999999999999999 8899999999999999 467899999999998764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
... .....+||++|+||
T Consensus 181 ~~~---~~~~~~gt~~y~aP 197 (484)
T 3nyv_A 181 ASK---KMKDKIGTAYYIAP 197 (484)
T ss_dssp CCC---SHHHHTTGGGTCCH
T ss_pred ccc---ccccCCCCccccCc
Confidence 332 23446799999998
No 251
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.89 E-value=3.9e-23 Score=208.31 Aligned_cols=147 Identities=26% Similarity=0.422 Sum_probs=123.8
Q ss_pred hcccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcC---CCccceeeeeeccC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIR---HRNLIKVISSCSNE 493 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~---H~niv~l~~~~~~~ 493 (596)
..++|+..+.||+|+||.||+|. ..+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 46789999999999999999852 24668888887775 99999999999765
Q ss_pred C-----eeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEe
Q 036342 494 E-----FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLS 567 (596)
Q Consensus 494 ~-----~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~ 567 (596)
. ..++||||++ |+|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 4 5799999996 59999998765 34899999999999999999999 8899999999999999999999999
Q ss_pred ccccccccCCCCCccccccccccccccCC
Q 036342 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 568 dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|||+++...... .....+||+.|+||
T Consensus 163 Dfg~a~~~~~~~---~~~~~~gt~~y~aP 188 (308)
T 3g33_A 163 DFGLARIYSYQM---ALTPVVVTLWYRAP 188 (308)
T ss_dssp SCSCTTTSTTCC---CSGGGGCCCSSCCH
T ss_pred eCccccccCCCc---ccCCccccccccCc
Confidence 999998764322 23456899999998
No 252
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.89 E-value=5.2e-24 Score=226.37 Aligned_cols=152 Identities=26% Similarity=0.438 Sum_probs=124.5
Q ss_pred HHHhcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++...++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.. +..|+||
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 34456789999999999999999852 468899999999999999999999876 6689999
Q ss_pred ecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 501 EYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
||+++|+|.+++.... ..+++.++..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 9999999999997532 35889999999999999999999 8999999999999999999999999999998764321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
........+|+.|+||
T Consensus 335 -~~~~~~~~~~~~y~aP 350 (452)
T 1fmk_A 335 -YTARQGAKFPIKWTAP 350 (452)
T ss_dssp ---------CCGGGSCH
T ss_pred -eecccCCcccccccCH
Confidence 1222334578899998
No 253
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=1.9e-23 Score=215.86 Aligned_cols=142 Identities=26% Similarity=0.384 Sum_probs=119.1
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE------ 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 494 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 4689999999999999999852 35678999999999999999999997653
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
..|+||||+ +++|.+++... .+++..+..++.|+++|+.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 469999999 88999999774 5789999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ....+||++|+||
T Consensus 178 ~~~~-----~~~~~~t~~y~aP 194 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAP 194 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCT
T ss_pred cccc-----cCcCcCCCCcCCH
Confidence 5321 2346799999998
No 254
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.89 E-value=2.1e-23 Score=212.10 Aligned_cols=147 Identities=29% Similarity=0.516 Sum_probs=126.2
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~l 498 (596)
.++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++..++..|+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 3689999999999999999852 3477899999999 99999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc
Q 036342 499 VLEYMPHGSLEKYLYSSN---------------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV 563 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~---------------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~ 563 (596)
||||+++|+|.+++.... ..+++.+++.++.|++.|+.||| ..+|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCe
Confidence 999999999999997653 36889999999999999999999 899999999999999999999
Q ss_pred EEEeccccccccCCCCCccccccccccccccCC
Q 036342 564 AHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 564 ~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+||+|||+++.... ........+|+.|+||
T Consensus 181 ~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aP 210 (327)
T 1fvr_A 181 AKIADFGLSRGQEV---YVKKTMGRLPVRWMAI 210 (327)
T ss_dssp EEECCTTCEESSCE---ECCC----CCTTTCCH
T ss_pred EEEcccCcCccccc---cccccCCCCCccccCh
Confidence 99999999875321 1122334678899998
No 255
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.89 E-value=1.7e-24 Score=221.24 Aligned_cols=142 Identities=18% Similarity=0.193 Sum_probs=116.9
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcC---------C-------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIR---------H------- 480 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~---------H------- 480 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++ |
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 4689999999999999999851 45788999999886 4
Q ss_pred ----------Cccceeeeeecc-------------CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Q 036342 481 ----------RNLIKVISSCSN-------------EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEY 537 (596)
Q Consensus 481 ----------~niv~l~~~~~~-------------~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~ 537 (596)
||||++++++.. ++..|+|||||++|++.+.+.. ..+++..+..++.|++.||.|
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~ 176 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAV 176 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHH
Confidence 555555555543 6789999999999987776644 357899999999999999999
Q ss_pred HhccCCCceEeCCCCCCCeeeCCCC--------------------cEEEeccccccccCCCCCccccccccccccccCC
Q 036342 538 LHFGYSALVIHCDLKPSNVLLDDNM--------------------VAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 538 lh~~~~~~i~Hrdlk~~NILl~~~~--------------------~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||+ ..+|+||||||+|||++.++ .+||+|||+|+.... ...+||+.||||
T Consensus 177 lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aP 246 (336)
T 2vuw_A 177 AEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDE 246 (336)
T ss_dssp HHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCS
T ss_pred HHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccCh
Confidence 992 35799999999999999887 999999999987642 134799999998
No 256
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.89 E-value=1.5e-23 Score=213.19 Aligned_cols=150 Identities=21% Similarity=0.365 Sum_probs=124.9
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|...+.||+|+||.||+|. ..+.+|+.++++++||||+++++++..++..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 4689999999999999999853 3467899999999999999999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEe
Q 036342 497 ALVLEYMPHGSLEKYLYSSN------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLS 567 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~ 567 (596)
|+||||+++|+|.+++.... ..+++.+++.++.|++.|+.||| ..+|+||||||+||+++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999998753 34889999999999999999999 889999999999999984 4569999
Q ss_pred ccccccccCCCCCccccccccccccccCC
Q 036342 568 DFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 568 dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|||+++...............||+.|+||
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPP 214 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred ccccccccccccccccCCCcCCCcceeCH
Confidence 99999865433222223345688999998
No 257
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.89 E-value=1.8e-23 Score=207.89 Aligned_cols=149 Identities=25% Similarity=0.440 Sum_probs=126.0
Q ss_pred hcccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.++ ..|
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCE
Confidence 45689999999999999999752 3577899999999999999999998754 468
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999999999876667899999999999999999999 89999999999999999999999999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ........+|+.|+||
T Consensus 166 ~~-~~~~~~~~~~~~y~aP 183 (281)
T 3cc6_A 166 ED-YYKASVTRLPIKWMSP 183 (281)
T ss_dssp --------CCCCCGGGCCH
T ss_pred cc-ccccccCCCCcceeCc
Confidence 22 1122345678899998
No 258
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.89 E-value=3.6e-23 Score=211.21 Aligned_cols=149 Identities=32% Similarity=0.490 Sum_probs=119.9
Q ss_pred hcccccccccccCCCceeehhhH----------------HhHHHHHHH--HhhcCCCccceeeeeec-----cCCeeEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF----------------KSFDVECEM--MKSIRHRNLIKVISSCS-----NEEFKALV 499 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~--l~~l~H~niv~l~~~~~-----~~~~~~lV 499 (596)
..++|+..+.||+|+||.||+|. ..+..|.++ ++.++||||+++++++. .....|+|
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv 90 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLV 90 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEE
Confidence 35689999999999999999862 234444444 45689999999998542 23467899
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCC---------ceEeCCCCCCCeeeCCCCcEEEeccc
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA---------LVIHCDLKPSNVLLDDNMVAHLSDFS 570 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~---------~i~Hrdlk~~NILl~~~~~~kl~dfG 570 (596)
|||+++|+|.+++.... .++..+..++.|+++|+.||| .. +|+||||||+|||++.++.+||+|||
T Consensus 91 ~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG 165 (336)
T 3g2f_A 91 MEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFG 165 (336)
T ss_dssp ECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCT
T ss_pred EecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeecc
Confidence 99999999999997764 488999999999999999999 77 99999999999999999999999999
Q ss_pred cccccCCCCC------ccccccccccccccCC
Q 036342 571 IAKLLTGEDQ------SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~------~~~~~~~~gt~~y~aP 596 (596)
+++.+..... .......+||+.|+||
T Consensus 166 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (336)
T 3g2f_A 166 LSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197 (336)
T ss_dssp TCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred ceeecccccccCccccccccccCCCccceeCc
Confidence 9987643211 1112345799999998
No 259
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.89 E-value=2.6e-23 Score=207.08 Aligned_cols=144 Identities=21% Similarity=0.390 Sum_probs=125.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|+..+.||+|+||.||+|. ..+.+|+..+.++ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 4689999999999999999852 3567899999999 999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC----------------
Q 036342 500 LEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---------------- 560 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---------------- 560 (596)
|||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997642 45889999999999999999999 889999999999999984
Q ss_pred ---CCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 561 ---NMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 561 ---~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
...+|++|||.++..... ....||+.|+||
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aP 199 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLAN 199 (289)
T ss_dssp ---CCCEEECCCTTCEETTCS------CCCCCCGGGCCH
T ss_pred cCCceEEEEcccccccccCCc------cccCCCccccCh
Confidence 447999999999876432 224589999998
No 260
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.89 E-value=2.7e-23 Score=210.00 Aligned_cols=154 Identities=23% Similarity=0.404 Sum_probs=120.0
Q ss_pred HHHhcccccccccccCCCceeehhhH--------------------------HhHHHHHHHHhhcCCCccceeeeeeccC
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF--------------------------KSFDVECEMMKSIRHRNLIKVISSCSNE 493 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~ 493 (596)
+....++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 33456789999999999999999641 3477899999999999999999999775
Q ss_pred C-----eeEEEEecCCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc
Q 036342 494 E-----FKALVLEYMPHGSLEKYLYS-----SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV 563 (596)
Q Consensus 494 ~-----~~~lV~e~~~~g~L~~~l~~-----~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~ 563 (596)
+ ..++||||+++|+|.+++.. ....+++..++.++.|+++|+.||| ..+|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCc
Confidence 4 35999999999999999853 2246899999999999999999999 899999999999999999999
Q ss_pred EEEeccccccccCCCCCccccccccccccccCC
Q 036342 564 AHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 564 ~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+||+|||+++...............+++.|+||
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 218 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCH
T ss_pred EEEeecCcceecccccccCcccccCCCccccCc
Confidence 999999999876433222223345678889987
No 261
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.88 E-value=1.4e-23 Score=223.51 Aligned_cols=143 Identities=27% Similarity=0.373 Sum_probs=117.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccC------C
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE------E 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 494 (596)
.++|+..+.||+|+||+||+|. +.+.+|+.++++++|||||++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 5689999999999999999852 4567899999999999999999999654 3
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
..|+||||+++ ++.+.+.. .+++..+..++.|+++||+||| ..+|+||||||+|||++.++.+||+|||+|+.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 57999999976 57776643 3789999999999999999999 88999999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......+||++|+||
T Consensus 214 ~~~~---~~~~~~~gt~~y~aP 232 (464)
T 3ttj_A 214 AGTS---FMMTPYVVTRYYRAP 232 (464)
T ss_dssp ---C---CCC----CCCTTCCH
T ss_pred cCCC---cccCCCcccccccCH
Confidence 6432 123456899999998
No 262
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.88 E-value=2.1e-23 Score=216.98 Aligned_cols=149 Identities=26% Similarity=0.432 Sum_probs=122.4
Q ss_pred HHhcccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeecc-----------
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSN----------- 492 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~----------- 492 (596)
+...++|...+.||+|+||+||+|. +...+|++++++++|||||++++++..
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 82 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQP 82 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC----------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccc
Confidence 4456789999999999999999863 234589999999999999999999843
Q ss_pred ---------------------------CCeeEEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccC
Q 036342 493 ---------------------------EEFKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGY 542 (596)
Q Consensus 493 ---------------------------~~~~~lV~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~ 542 (596)
+...++||||++ |+|.+.+.. ....+++..+..++.|+++|+.|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH--- 158 (383)
T 3eb0_A 83 PDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH--- 158 (383)
T ss_dssp ---------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---
T ss_pred ccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---
Confidence 334889999998 588777653 3356899999999999999999999
Q ss_pred CCceEeCCCCCCCeeeC-CCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 543 SALVIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~-~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.+|+||||||+||+++ .++.+||+|||+|+.+.... ......||+.|+||
T Consensus 159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aP 210 (383)
T 3eb0_A 159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAP 210 (383)
T ss_dssp TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCH
T ss_pred HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCH
Confidence 99999999999999997 68999999999998764322 23346789999998
No 263
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.88 E-value=1.3e-23 Score=208.66 Aligned_cols=152 Identities=23% Similarity=0.448 Sum_probs=128.8
Q ss_pred HHHhcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++...++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++.. +..++||
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 86 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIIT 86 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEE
Confidence 34455789999999999999999852 457899999999999999999999874 4589999
Q ss_pred ecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 501 EYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+++||||||+||++++++.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 163 (279)
T 1qpc_A 87 EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE 163 (279)
T ss_dssp ECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC
T ss_pred ecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc
Confidence 9999999999987542 25789999999999999999999 8999999999999999999999999999998764322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
........+|+.|+||
T Consensus 164 -~~~~~~~~~~~~y~aP 179 (279)
T 1qpc_A 164 -YTAREGAKFPIKWTAP 179 (279)
T ss_dssp -EECCTTCCCCTTTSCH
T ss_pred -cccccCCCCccCccCh
Confidence 1122334578889998
No 264
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.88 E-value=4.3e-23 Score=206.09 Aligned_cols=143 Identities=27% Similarity=0.465 Sum_probs=123.5
Q ss_pred cccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeecc----CCeeEE
Q 036342 446 EFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSN----EEFKAL 498 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~----~~~~~l 498 (596)
.|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.. +...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 47778899999999999852 357789999999999999999998864 356899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeC-CCCcEEEecccccccc
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLD-DNMVAHLSDFSIAKLL 575 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~-~~~~~kl~dfGla~~~ 575 (596)
||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+ |+||||||+||+++ +++.+||+|||+++..
T Consensus 107 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999999998753 5789999999999999999999 777 99999999999997 7899999999999764
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
... ......||+.|+||
T Consensus 183 ~~~----~~~~~~~t~~y~aP 199 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAP 199 (290)
T ss_dssp CTT----SBEESCSSCCCCCG
T ss_pred ccc----ccccccCCcCcCCH
Confidence 322 22345799999998
No 265
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=3.1e-23 Score=206.76 Aligned_cols=149 Identities=23% Similarity=0.408 Sum_probs=126.3
Q ss_pred cccccccc-cccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 444 TDEFSENN-LIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~-~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
.++|...+ .||+|+||.||+|. +.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34666666 99999999999752 3477899999999999999999999 4456899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999999999876667899999999999999999999 889999999999999999999999999999876433
Q ss_pred CCc-cccccccccccccCC
Q 036342 579 DQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aP 596 (596)
... .......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~y~aP 182 (287)
T 1u59_A 164 DSYYTARSAGKWPLKWYAP 182 (287)
T ss_dssp SCEECCCCSSCCCGGGCCH
T ss_pred cceeeccccccccccccCH
Confidence 221 112334578899998
No 266
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.88 E-value=3.5e-23 Score=209.18 Aligned_cols=149 Identities=27% Similarity=0.358 Sum_probs=126.3
Q ss_pred hcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+..|+||||+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 45679999999999999999862 45789999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccc
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMT 583 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~ 583 (596)
++|+|.+++......+++..+..++.|++.|+.||| ..+++|+||||+||+++.++.+||+|||+++...... ..
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~ 181 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AK 181 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SC
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--cc
Confidence 999999999865567899999999999999999999 8899999999999999999999999999998764321 12
Q ss_pred cccccccccccCC
Q 036342 584 QTQTLGTIGYMAP 596 (596)
Q Consensus 584 ~~~~~gt~~y~aP 596 (596)
.....||+.|+||
T Consensus 182 ~~~~~~~~~y~aP 194 (314)
T 3com_A 182 RNTVIGTPFWMAP 194 (314)
T ss_dssp BCCCCSCGGGCCH
T ss_pred cCccCCCCCccCh
Confidence 3345789999998
No 267
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.88 E-value=2e-23 Score=207.55 Aligned_cols=147 Identities=27% Similarity=0.510 Sum_probs=127.6
Q ss_pred cccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeecc--------------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSN-------------- 492 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~-------------- 492 (596)
.++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 4579999999999999999863 457899999999999999999998854
Q ss_pred --CCeeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecc
Q 036342 493 --EEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569 (596)
Q Consensus 493 --~~~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~df 569 (596)
....|+||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcc
Confidence 345899999999999999997642 46889999999999999999999 889999999999999999999999999
Q ss_pred ccccccCCCCCccccccccccccccCC
Q 036342 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 570 Gla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+++...... ......||+.|+||
T Consensus 167 g~~~~~~~~~---~~~~~~~~~~y~aP 190 (284)
T 2a19_B 167 GLVTSLKNDG---KRTRSKGTLRYMSP 190 (284)
T ss_dssp TTCEESSCCS---CCCCCCSCCTTSCH
T ss_pred hhheeccccc---cccccCCcccccCh
Confidence 9998764322 12345799999998
No 268
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.88 E-value=2.1e-23 Score=206.12 Aligned_cols=144 Identities=29% Similarity=0.518 Sum_probs=117.8
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 4689999999999999999852 45778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc---eEeCCCCCCCeeeCC--------CCcEEEecc
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSAL---VIHCDLKPSNVLLDD--------NMVAHLSDF 569 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~---i~Hrdlk~~NILl~~--------~~~~kl~df 569 (596)
||+++|+|.+++... .+++..+..++.|+++|+.||| ..+ |+||||||+||+++. ++.+||+||
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999998643 5889999999999999999999 666 999999999999986 678999999
Q ss_pred ccccccCCCCCccccccccccccccCC
Q 036342 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 570 Gla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+++...... .....||+.|+||
T Consensus 161 g~~~~~~~~~----~~~~~~~~~y~aP 183 (271)
T 3dtc_A 161 GLAREWHRTT----KMSAAGAYAWMAP 183 (271)
T ss_dssp CC-----------------CCGGGSCH
T ss_pred Cccccccccc----ccCCCCccceeCH
Confidence 9998654321 2235789999998
No 269
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.88 E-value=6.1e-24 Score=213.45 Aligned_cols=150 Identities=27% Similarity=0.432 Sum_probs=116.0
Q ss_pred ccccccccccCCCceeehhhH----------------HhHHHHHHHHhh--cCCCccceeeeeeccCC----eeEEEEec
Q 036342 445 DEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKS--IRHRNLIKVISSCSNEE----FKALVLEY 502 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~lV~e~ 502 (596)
++|...+.||+|+||.||+|. ..+..|.+++.. ++||||+++++++...+ ..++||||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 82 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEec
Confidence 579999999999999999863 346678888887 79999999999998766 78999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+++|+|.+++... .+++..+..++.|++.|+.|||.. +..+|+||||||+||+++.++.+||+|||+++....
T Consensus 83 ~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~ 160 (303)
T 3gxj_A 83 HEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp CTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEET
T ss_pred cCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccC
Confidence 9999999999765 467788899999999999999932 267899999999999999999999999999986643
Q ss_pred CCCcc--ccccccccccccCC
Q 036342 578 EDQSM--TQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~--~~~~~~gt~~y~aP 596 (596)
..... ......||+.|+||
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aP 181 (303)
T 3gxj_A 161 ATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTEESCC-----CCGGGCCH
T ss_pred CCcccccccCCCCcCccccCH
Confidence 32211 12334799999998
No 270
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.88 E-value=4.2e-23 Score=208.81 Aligned_cols=148 Identities=27% Similarity=0.401 Sum_probs=121.2
Q ss_pred cccccc-ccccCCCceeehhhH---------------------HhHHHHHHHHhh-cCCCccceeeeeeccCCeeEEEEe
Q 036342 445 DEFSEN-NLIGRGGFALFIRAF---------------------KSFDVECEMMKS-IRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 445 ~~~~~~-~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~-l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
+.|... +.||+|+||.||+|. +.+.+|++++++ .+||||+++++++..++..|+|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567774 789999999999852 457889999998 479999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc---EEEeccccccccCCC
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV---AHLSDFSIAKLLTGE 578 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~---~kl~dfGla~~~~~~ 578 (596)
|+++|+|.+++.... .+++..+..++.|++.|++||| ..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 92 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999999998754 5789999999999999999999 889999999999999988765 999999998865322
Q ss_pred CC-----ccccccccccccccCC
Q 036342 579 DQ-----SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~-----~~~~~~~~gt~~y~aP 596 (596)
.. .......+||+.|+||
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aP 190 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAP 190 (316)
T ss_dssp --------------CCSGGGCCH
T ss_pred CccccccccccccccCCcCccCh
Confidence 11 1112235699999998
No 271
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.88 E-value=2.8e-23 Score=214.32 Aligned_cols=154 Identities=23% Similarity=0.314 Sum_probs=125.7
Q ss_pred CHHHHHHhcccccccccccCCCceeehhhH-------------------------------HhHHHHHHHHhhcCCCccc
Q 036342 436 SYLELCRATDEFSENNLIGRGGFALFIRAF-------------------------------KSFDVECEMMKSIRHRNLI 484 (596)
Q Consensus 436 ~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~-------------------------------~~~~~e~~~l~~l~H~niv 484 (596)
...++....++|...+.||+|+||.||+|. +.+.+|+.++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 356777888999999999999999999851 4578999999999999999
Q ss_pred eeeeeecc-----CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC
Q 036342 485 KVISSCSN-----EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD 559 (596)
Q Consensus 485 ~l~~~~~~-----~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~ 559 (596)
++++++.. ....|+||||++ |+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+||+++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 99999843 346899999997 6999998877667899999999999999999999 88999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 560 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 560 ~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.++.+||+|||+++...... ......||+.|+||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aP 202 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADA---NKTHYVTHRWYRAP 202 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCH
T ss_pred CCCCEEEEecCccccccccc---ccceecccceecCc
Confidence 99999999999998543221 23345789999998
No 272
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.88 E-value=5.1e-23 Score=212.56 Aligned_cols=151 Identities=31% Similarity=0.505 Sum_probs=131.7
Q ss_pred HHHHhcccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhc-CCCccceeee
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSI-RHRNLIKVIS 488 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l-~H~niv~l~~ 488 (596)
......++|...+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 334456789999999999999999852 2466899999999 8999999999
Q ss_pred eeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEec
Q 036342 489 SCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 489 ~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
++...+..|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+|||+||+||+++.++.+|++|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEe
Confidence 9999999999999999999999997653 5889999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||++..+.... .....+||+.|+||
T Consensus 244 fG~~~~~~~~~---~~~~~~gt~~y~aP 268 (365)
T 2y7j_A 244 FGFSCHLEPGE---KLRELCGTPGYLAP 268 (365)
T ss_dssp CTTCEECCTTC---CBCCCCSCGGGCCH
T ss_pred cCcccccCCCc---ccccCCCCCCccCh
Confidence 99998764322 23346899999998
No 273
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.88 E-value=4.4e-23 Score=205.15 Aligned_cols=145 Identities=28% Similarity=0.469 Sum_probs=125.4
Q ss_pred ccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 445 DEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
++|...+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 578999999999999999852 34789999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC----cEEEecccccc
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM----VAHLSDFSIAK 573 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~----~~kl~dfGla~ 573 (596)
+||||+++++|.+++.... .+++..+..++.|++.|+.||| ..+++||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999999997653 5889999999999999999999 88999999999999998877 89999999998
Q ss_pred ccCCCCCccccccccccccccCC
Q 036342 574 LLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
...... ......||+.|+||
T Consensus 161 ~~~~~~---~~~~~~~~~~y~aP 180 (283)
T 3bhy_A 161 KIEAGN---EFKNIFGTPEFVAP 180 (283)
T ss_dssp ECC-----------CCCGGGCCH
T ss_pred eccCCC---cccccCCCcCccCc
Confidence 764321 12345789999998
No 274
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.88 E-value=1.7e-23 Score=215.90 Aligned_cols=145 Identities=22% Similarity=0.354 Sum_probs=126.7
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 4679999999999999999852 457899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
|+++|+|.+++.... .+++..+..++.+++.|+.||| .. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999998754 5789999999999999999999 65 8999999999999999999999999998765321
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 186 --~~~~~~gt~~y~aP 199 (360)
T 3eqc_A 186 --MANSFVGTRSYMSP 199 (360)
T ss_dssp --C----CCCCTTCCH
T ss_pred --cccCCCCCCCeECH
Confidence 12345799999998
No 275
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.88 E-value=2.5e-23 Score=228.92 Aligned_cols=147 Identities=22% Similarity=0.391 Sum_probs=120.3
Q ss_pred cccccc-cccCCCceeehhh------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 446 EFSENN-LIGRGGFALFIRA------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 446 ~~~~~~-~ig~G~~g~v~~~------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++...+ .||+|+||.||+| .+.+.+|++++++++|||||+++++|.. +..|+||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 344344 7999999999975 1457899999999999999999999976 4589999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
|||++|+|.+++......+++.++..++.|++.|++||| ..+|+||||||+|||++.++.+||+|||+++.+.....
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999877667899999999999999999999 88999999999999999999999999999987643221
Q ss_pred c-cccccccccccccCC
Q 036342 581 S-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~-~~~~~~~gt~~y~aP 596 (596)
. .......+|+.|+||
T Consensus 492 ~~~~~~~~~~~~~y~AP 508 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAP 508 (613)
T ss_dssp ----------CCTTSCH
T ss_pred eeeeccCCCCccceeCH
Confidence 1 112234567899998
No 276
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.88 E-value=1.6e-23 Score=213.21 Aligned_cols=149 Identities=23% Similarity=0.396 Sum_probs=121.0
Q ss_pred HHhcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
....++|...+.||+|+||.||+|. +.+.+|+.++++++|||||++++++..++..|
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 3456789999999999999999862 23568999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee-----CCCCcEEEeccccc
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL-----DDNMVAHLSDFSIA 572 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl-----~~~~~~kl~dfGla 572 (596)
+||||++ |+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++ +.++.+||+|||++
T Consensus 110 lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 9999997 59999998764 5889999999999999999999 8899999999999999 45566999999999
Q ss_pred cccCCCCCccccccccccccccCC
Q 036342 573 KLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 573 ~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+...... .......||+.|+||
T Consensus 185 ~~~~~~~--~~~~~~~~t~~y~aP 206 (329)
T 3gbz_A 185 RAFGIPI--RQFTHEIITLWYRPP 206 (329)
T ss_dssp HHHC-------------CCTTCCH
T ss_pred cccCCcc--cccCCCcCCccccCH
Confidence 8764321 123345789999998
No 277
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.88 E-value=2.7e-23 Score=211.72 Aligned_cols=147 Identities=25% Similarity=0.463 Sum_probs=123.2
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 4689999999999999999852 34678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||++++++.++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 104 EFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp ECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred ecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 999998888876544 35889999999999999999999 88999999999999999999999999999986543221
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......||++|+||
T Consensus 180 --~~~~~~~t~~y~aP 193 (331)
T 4aaa_A 180 --VYDDEVATRWYRAP 193 (331)
T ss_dssp ------CCCCCTTCCH
T ss_pred --ccCCCcCCccccCc
Confidence 23345789999998
No 278
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.88 E-value=1.5e-23 Score=210.66 Aligned_cols=149 Identities=23% Similarity=0.351 Sum_probs=126.5
Q ss_pred hcccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 34689999999999999999852 457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++|+|.+++......+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||++...... .
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 171 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--L 171 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH--H
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccc--c
Confidence 99999999998876667899999999999999999999 889999999999999999999999999987643211 1
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 172 ~~~~~~~~~~~y~aP 186 (302)
T 2j7t_A 172 QKRDSFIGTPYWMAP 186 (302)
T ss_dssp HC-----CCGGGCCH
T ss_pred cccccccCChhhcCC
Confidence 112335789999998
No 279
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.88 E-value=1.8e-23 Score=209.95 Aligned_cols=153 Identities=25% Similarity=0.401 Sum_probs=117.5
Q ss_pred HHhcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
....++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 3446789999999999999999852 345689999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh-------CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 499 VLEYMPHGSLEKYLYS-------SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~-------~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
||||+++|+|.+++.. ....+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999874 2345889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCC---ccccccccccccccCC
Q 036342 572 AKLLTGEDQ---SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~---~~~~~~~~gt~~y~aP 596 (596)
++....... ........||+.|+||
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aP 195 (303)
T 2vwi_A 168 SAFLATGGDITRNKVRKTFVGTPCWMAP 195 (303)
T ss_dssp HHHCC---------------CCCTTCCH
T ss_pred hheeccCCCccchhhhcccCCCccccCH
Confidence 886543211 1112345799999998
No 280
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.88 E-value=6.8e-23 Score=206.01 Aligned_cols=146 Identities=28% Similarity=0.423 Sum_probs=129.2
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
.+.|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 3568999999999999999852 457899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCc
Q 036342 502 YMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~ 581 (596)
|+++++|.+++... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 101 ~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEPG--PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp CCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred eCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 99999999998753 5889999999999999999999 8899999999999999999999999999998764321
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 174 ~~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 174 IKRNTFVGTPFWMAP 188 (303)
T ss_dssp CCBCCCCSCGGGCCH
T ss_pred cccCccCCCcCccCH
Confidence 123446799999998
No 281
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.88 E-value=6.3e-23 Score=203.21 Aligned_cols=146 Identities=27% Similarity=0.464 Sum_probs=121.5
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 4689999999999999999752 2567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++++|.+++.... .+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp EECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred EeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999997654 5789999999999999999999 8899999999999999999999999999998754321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 166 ---~~~~~~~~~~y~aP 179 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAP 179 (276)
T ss_dssp --------------CCT
T ss_pred ---ceecccCCccccCH
Confidence 12345789999998
No 282
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.88 E-value=5e-23 Score=207.67 Aligned_cols=148 Identities=25% Similarity=0.318 Sum_probs=122.4
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
.++|...+.||+|+||.||++. +.+.+|+.++++++||||+++++++..++..|+|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 4689999999999999999852 4577899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||+++++|.+++.... .+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999999998754 5889999999999999999999 8899999999999999999999999999988654322
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
........||+.|+||
T Consensus 189 -~~~~~~~~~~~~y~aP 204 (309)
T 2h34_A 189 -LTQLGNTVGTLYYMAP 204 (309)
T ss_dssp ---------CCGGGCCG
T ss_pred -cccccccCCCcCccCH
Confidence 1122345789999998
No 283
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.88 E-value=3.6e-23 Score=229.19 Aligned_cols=151 Identities=23% Similarity=0.366 Sum_probs=126.4
Q ss_pred HHhcccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF 495 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~ 495 (596)
....++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.+ +.
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~ 464 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NP 464 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cc
Confidence 3345678889999999999999752 457789999999999999999999854 56
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+|+||||||+|||++.++.+||+|||+++..
T Consensus 465 ~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 465 VWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred eEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 89999999999999999877667899999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ........+|+.||||
T Consensus 542 ~~~~-~~~~~~~~~t~~y~aP 561 (656)
T 2j0j_A 542 EDST-YYKASKGKLPIKWMAP 561 (656)
T ss_dssp CC-----------CCGGGCCH
T ss_pred CCCc-ceeccCCCCCcceeCH
Confidence 4332 1222345678899998
No 284
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.88 E-value=1.2e-22 Score=205.76 Aligned_cols=145 Identities=26% Similarity=0.464 Sum_probs=123.6
Q ss_pred ccccccccCCCceeehhh--------------------------HHhHHHHHHHHhhcCCCccceeeeeeccC--CeeEE
Q 036342 447 FSENNLIGRGGFALFIRA--------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNE--EFKAL 498 (596)
Q Consensus 447 ~~~~~~ig~G~~g~v~~~--------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~--~~~~l 498 (596)
|+..+.||+|+||.||++ .+.+.+|+.++++++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488999999999999542 13578999999999999999999999864 57899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
||||+++|+|.+++.... +++..++.++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999997754 789999999999999999999 889999999999999999999999999999876543
Q ss_pred CCc-cccccccccccccCC
Q 036342 579 DQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~-~~~~~~~gt~~y~aP 596 (596)
... .......||+.|+||
T Consensus 188 ~~~~~~~~~~~~~~~y~aP 206 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAP 206 (318)
T ss_dssp CSEEEC---CCCCGGGCCH
T ss_pred ccccccccCCCCCceeeCh
Confidence 221 123345688889998
No 285
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.88 E-value=4.3e-23 Score=206.18 Aligned_cols=149 Identities=24% Similarity=0.407 Sum_probs=125.2
Q ss_pred hcccccccc-cccCCCceeehhh-------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 443 ATDEFSENN-LIGRGGFALFIRA-------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 443 ~~~~~~~~~-~ig~G~~g~v~~~-------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
..++|...+ .||+|+||.||+| .+.+.+|+.++++++||||+++++++ ..+..
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~ 92 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESW 92 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCc
Confidence 345788777 9999999999986 13577899999999999999999999 55678
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 93 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 93 MLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 99999999999999998754 5889999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......+|+.|+||
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aP 189 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAP 189 (291)
T ss_dssp TTCSEEEC----CCCGGGCCH
T ss_pred cCCCcccccccCCCCceeeCh
Confidence 33221 112234567889998
No 286
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.88 E-value=6e-23 Score=207.10 Aligned_cols=149 Identities=28% Similarity=0.442 Sum_probs=118.0
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
..++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 34689999999999999999752 346789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 499 VLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
||||+++|+|.+++.. ....+++..++.++.|+++|+.||| ..+++||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999865 2346889999999999999999999 889999999999999999999999999998865
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... .......||+.|+||
T Consensus 187 ~~~~--~~~~~~~~~~~y~aP 205 (310)
T 2wqm_A 187 SSKT--TAAHSLVGTPYYMSP 205 (310)
T ss_dssp --------------CCSSCCH
T ss_pred cCCC--ccccccCCCeeEeCh
Confidence 4321 122345789999998
No 287
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.88 E-value=9.1e-24 Score=229.06 Aligned_cols=152 Identities=26% Similarity=0.436 Sum_probs=129.2
Q ss_pred HHHhcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 440 LCRATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 440 ~~~~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++...++|...+.||+|+||.||+|. +.+.+|+++|++++|||||++++++.+ +..|+||
T Consensus 262 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~ 340 (535)
T 2h8h_A 262 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 340 (535)
T ss_dssp SBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred eecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEee
Confidence 34456789999999999999999852 468899999999999999999999876 6689999
Q ss_pred ecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCC
Q 036342 501 EYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~ 579 (596)
|||++|+|.++++... ..+++.+++.++.|+++||.||| ..+|+||||||+|||+++++.+||+|||+++.....
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 416 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN- 416 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCC-
Confidence 9999999999997532 35889999999999999999999 899999999999999999999999999999875421
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
.........++..|+||
T Consensus 417 ~~~~~~~~~~~~~y~aP 433 (535)
T 2h8h_A 417 EYTARQGAKFPIKWTAP 433 (535)
T ss_dssp HHHTTCSTTSCGGGSCH
T ss_pred ceecccCCcCcccccCH
Confidence 11112234577889998
No 288
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.88 E-value=8e-23 Score=207.79 Aligned_cols=150 Identities=26% Similarity=0.463 Sum_probs=127.9
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeeccCC--ee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE--FK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~--~~ 496 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4578999999999999998752 35789999999999999999999987654 68
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
++||||+++|+|.+++......+++.+++.++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 9999999999999999887667899999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......++..|+||
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aP 217 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAP 217 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCH
T ss_pred ccccccccccCCCCceeEECc
Confidence 33221 112234577889998
No 289
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.88 E-value=2.8e-23 Score=212.97 Aligned_cols=148 Identities=22% Similarity=0.286 Sum_probs=119.2
Q ss_pred cccccccccccCCCceeehhhH-----------------------------------HhHHHHHHHHhhcCCCccceeee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------------------KSFDVECEMMKSIRHRNLIKVIS 488 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------------------~~~~~e~~~l~~l~H~niv~l~~ 488 (596)
.++|...+.||+|+||.||+|. +.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3589999999999999999852 12456777888899999999999
Q ss_pred eecc----CCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC--
Q 036342 489 SCSN----EEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM-- 562 (596)
Q Consensus 489 ~~~~----~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~-- 562 (596)
++.. ++..|+||||+ +|+|.+++.... .+++.+++.++.|++.|+.||| +.+|+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTT
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCC
Confidence 9977 67899999999 999999997764 6899999999999999999999 88999999999999998877
Q ss_pred cEEEeccccccccCCCCC-----ccccccccccccccCC
Q 036342 563 VAHLSDFSIAKLLTGEDQ-----SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 563 ~~kl~dfGla~~~~~~~~-----~~~~~~~~gt~~y~aP 596 (596)
.+||+|||+++.+..... ........||+.|+||
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 229 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL 229 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence 999999999987642211 1112446799999998
No 290
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.88 E-value=5.4e-23 Score=205.29 Aligned_cols=149 Identities=26% Similarity=0.373 Sum_probs=121.8
Q ss_pred cccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~ 496 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++ .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 4579999999999999999752 34668999999999999999999998765 8
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
++||||+++|+|.+++......+++..+..++.|+++|+.||| ..+++||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999999999876556899999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCc-cccccccccccccCC
Q 036342 577 GEDQS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~-~~~~~~~gt~~y~aP 596 (596)
..... .......+|+.|+||
T Consensus 173 ~~~~~~~~~~~~~~~~~y~aP 193 (291)
T 1u46_A 173 QNDDHYVMQEHRKVPFAWCAP 193 (291)
T ss_dssp C-CCEEEC-----CCGGGCCH
T ss_pred ccccchhhhccCCCCceeeCc
Confidence 33221 112335678889998
No 291
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.88 E-value=5e-23 Score=211.22 Aligned_cols=146 Identities=25% Similarity=0.433 Sum_probs=129.8
Q ss_pred cccccccccccCCCceeehhhH------------------------------------HhHHHHHHHHhhcCCCccceee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------------------KSFDVECEMMKSIRHRNLIKVI 487 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------------------~~~~~e~~~l~~l~H~niv~l~ 487 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4689999999999999999751 5678999999999999999999
Q ss_pred eeeccCCeeEEEEecCCCCCHHHH------HhhC-CCCCCHHHHHHHHHHHHHHHHHHhccCC-CceEeCCCCCCCeeeC
Q 036342 488 SSCSNEEFKALVLEYMPHGSLEKY------LYSS-NCILDIFQRLNIMIDVASALEYLHFGYS-ALVIHCDLKPSNVLLD 559 (596)
Q Consensus 488 ~~~~~~~~~~lV~e~~~~g~L~~~------l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~-~~i~Hrdlk~~NILl~ 559 (596)
+++..++..|+||||+++|+|.++ +... ...+++..+..++.|++.|+.||| . .+|+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEEc
Confidence 999999999999999999999998 5542 356899999999999999999999 7 8999999999999999
Q ss_pred CCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 560 DNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 560 ~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.++.+||+|||+++..... ......||+.|+||
T Consensus 187 ~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aP 219 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPP 219 (348)
T ss_dssp TTSCEEECCCTTCEECBTT----EECSSCSCGGGCCG
T ss_pred CCCcEEEeccccccccccc----cccCCCCCcCccCc
Confidence 9999999999999875432 23446799999998
No 292
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=204.77 Aligned_cols=149 Identities=23% Similarity=0.417 Sum_probs=123.7
Q ss_pred cccccccccccCCCceeehhhH-------------------------HhHHHHHHHHhhcCCCccceeeeeec--cCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------------KSFDVECEMMKSIRHRNLIKVISSCS--NEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------------~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~ 496 (596)
.++|...+.||+|+||.||++. +.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 4689999999999999999741 34678999999999999999999984 45578
Q ss_pred EEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 497 ALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
|+||||+++| +.+++... ...+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999876 77777653 346889999999999999999999 889999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.............||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aP 180 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPP 180 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCH
T ss_pred CccccccccccCCCCCCCcCh
Confidence 432222223445799999998
No 293
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.88 E-value=2.1e-23 Score=212.02 Aligned_cols=157 Identities=25% Similarity=0.346 Sum_probs=127.4
Q ss_pred cCHHHHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhc-CCCccceeeeeecc-
Q 036342 435 FSYLELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSI-RHRNLIKVISSCSN- 492 (596)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l-~H~niv~l~~~~~~- 492 (596)
+++.++....++|+..+.||+|+||.||+|. +.+.+|+.+++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 3444455567899999999999999999852 4578999999999 89999999999976
Q ss_pred -----CCeeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEE
Q 036342 493 -----EEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHL 566 (596)
Q Consensus 493 -----~~~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl 566 (596)
.+..|+||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEE
Confidence 457899999999999999998653 46889999999999999999999 889999999999999999999999
Q ss_pred eccccccccCCCCCccccccccccccccCC
Q 036342 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 567 ~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+|||+++...... .......||+.|+||
T Consensus 171 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aP 198 (326)
T 2x7f_A 171 VDFGVSAQLDRTV--GRRNTFIGTPYWMAP 198 (326)
T ss_dssp CCCTTTC---------------CCGGGCCH
T ss_pred eeCcCceecCcCc--cccccccCCccccCh
Confidence 9999988654221 122345799999998
No 294
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.88 E-value=1.2e-22 Score=206.74 Aligned_cols=143 Identities=22% Similarity=0.403 Sum_probs=125.0
Q ss_pred cccccccccccCCCceeehhhH------------------HhHHHHHHHHhhcC-CCccceeeeeecc--CCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------KSFDVECEMMKSIR-HRNLIKVISSCSN--EEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------~~~~~e~~~l~~l~-H~niv~l~~~~~~--~~~~~lV~e~ 502 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++ ||||+++++++.. ....++||||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 4679999999999999999862 56889999999997 9999999999987 5678999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC-cEEEeccccccccCCCCCc
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM-VAHLSDFSIAKLLTGEDQS 581 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~-~~kl~dfGla~~~~~~~~~ 581 (596)
+++++|.+++.. +++.++..++.|++.|+.||| ..+|+||||||+||+++.++ .+||+|||+++......
T Consensus 115 ~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~-- 185 (330)
T 3nsz_A 115 VNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-- 185 (330)
T ss_dssp CCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC--
T ss_pred cCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC--
Confidence 999999998853 678899999999999999999 89999999999999999776 89999999998764322
Q ss_pred cccccccccccccCC
Q 036342 582 MTQTQTLGTIGYMAP 596 (596)
Q Consensus 582 ~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 186 -~~~~~~~~~~y~aP 199 (330)
T 3nsz_A 186 -EYNVRVASRYFKGP 199 (330)
T ss_dssp -CCCSCCSCGGGCCH
T ss_pred -ccccccccccccCh
Confidence 22345789999998
No 295
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.87 E-value=1.5e-22 Score=202.94 Aligned_cols=147 Identities=28% Similarity=0.469 Sum_probs=129.0
Q ss_pred hcccccccccccCCCceeehhhH------------------------------HhHHHHHHHHhhcC-CCccceeeeeec
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------------KSFDVECEMMKSIR-HRNLIKVISSCS 491 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------------~~~~~e~~~l~~l~-H~niv~l~~~~~ 491 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 35689999999999999999742 23568999999996 999999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
.++..++||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 170 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGF 170 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccc
Confidence 9999999999999999999998653 5889999999999999999999 88999999999999999999999999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++...... ......||+.|+||
T Consensus 171 ~~~~~~~~---~~~~~~~~~~y~aP 192 (298)
T 1phk_A 171 SCQLDPGE---KLREVCGTPSYLAP 192 (298)
T ss_dssp CEECCTTC---CBCCCCSCGGGCCH
T ss_pred hhhcCCCc---ccccccCCccccCH
Confidence 98764322 22345789999998
No 296
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.87 E-value=8e-23 Score=205.62 Aligned_cols=145 Identities=26% Similarity=0.438 Sum_probs=127.1
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEec
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.++|...+.||+|+||.||++. +.+.+|+.++++++||||+++++++...+..|+||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 4578999999999999999752 3477899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccCCCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~~~~ 579 (596)
+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||++ +.++.+||+|||+++.....
T Consensus 88 ~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~- 162 (304)
T 2jam_A 88 VSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG- 162 (304)
T ss_dssp CCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-
T ss_pred CCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-
Confidence 99999999987654 5789999999999999999999 8899999999999999 77899999999998754321
Q ss_pred CccccccccccccccCC
Q 036342 580 QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 163 ---~~~~~~~~~~y~aP 176 (304)
T 2jam_A 163 ---IMSTACGTPGYVAP 176 (304)
T ss_dssp ---TTHHHHSCCCBCCT
T ss_pred ---ccccccCCCCccCh
Confidence 22345799999998
No 297
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.87 E-value=1.2e-22 Score=203.11 Aligned_cols=147 Identities=28% Similarity=0.450 Sum_probs=125.2
Q ss_pred ccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecC
Q 036342 445 DEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~ 503 (596)
++|.....||+|+||.||+|. +.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 455666799999999999852 45778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC-CCcEEEeccccccccCCCCC
Q 036342 504 PHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 504 ~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~-~~~~kl~dfGla~~~~~~~~ 580 (596)
++|+|.+++.... ..+++..+..++.|++.|+.||| ..+++||||||+||+++. ++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999998753 24568888999999999999999 889999999999999987 8999999999998764321
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
.......||+.|+||
T Consensus 178 -~~~~~~~~~~~y~aP 192 (295)
T 2clq_A 178 -PCTETFTGTLQYMAP 192 (295)
T ss_dssp ----CCCCCCGGGCCH
T ss_pred -CcccccCCCccccCh
Confidence 122345789999998
No 298
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.87 E-value=1.2e-23 Score=213.03 Aligned_cols=155 Identities=22% Similarity=0.345 Sum_probs=128.4
Q ss_pred HHHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeE
Q 036342 438 LELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~ 497 (596)
.++....++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..+
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 3444556789999999999999999863 34668999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCC
Q 036342 498 LVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~ 577 (596)
+||||+++|+|.+++......+++..+..++.|++.|+.||| ..+++||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999999999877667889999999999999999999 88999999999999998 67999999999876432
Q ss_pred CC---CccccccccccccccCC
Q 036342 578 ED---QSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~---~~~~~~~~~gt~~y~aP 596 (596)
.. .........||+.|+||
T Consensus 182 ~~~~~~~~~~~~~~g~~~y~aP 203 (319)
T 2y4i_B 182 LQAGRREDKLRIQNGWLCHLAP 203 (319)
T ss_dssp ------CCSCBCCSGGGGTSCH
T ss_pred ccccccccccccCCCcccccCh
Confidence 11 11122335689999998
No 299
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.87 E-value=2.2e-22 Score=205.82 Aligned_cols=154 Identities=27% Similarity=0.415 Sum_probs=129.6
Q ss_pred HHhcccccccccccCCCceeehhhH----------------HhHHHHHHHHhh--cCCCccceeeeeeccCC----eeEE
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKS--IRHRNLIKVISSCSNEE----FKAL 498 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~--l~H~niv~l~~~~~~~~----~~~l 498 (596)
....++|...+.||+|+||.||+|. +.+.+|+++++. ++||||+++++++...+ ..|+
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~l 117 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 117 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEE
T ss_pred ccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEE
Confidence 3445789999999999999999852 356788888887 79999999999998765 7899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc-----CCCceEeCCCCCCCeeeCCCCcEEEecccccc
Q 036342 499 VLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG-----YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-----~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~ 573 (596)
||||+++|+|.+++... .+++.+++.++.|++.|+.|||.. ...+|+||||||+||+++.++.+||+|||+++
T Consensus 118 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 118 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp EECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 99999999999999765 478999999999999999999932 15689999999999999999999999999998
Q ss_pred ccCCCCCcc--ccccccccccccCC
Q 036342 574 LLTGEDQSM--TQTQTLGTIGYMAP 596 (596)
Q Consensus 574 ~~~~~~~~~--~~~~~~gt~~y~aP 596 (596)
......... ......||+.|+||
T Consensus 196 ~~~~~~~~~~~~~~~~~gt~~y~aP 220 (342)
T 1b6c_B 196 RHDSATDTIDIAPNHRVGTKRYMAP 220 (342)
T ss_dssp EEETTTTEEEECCCSCCCCGGGCCH
T ss_pred eccccccccccccccCCcCcccCCH
Confidence 764332211 12345799999998
No 300
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.87 E-value=6.7e-23 Score=207.96 Aligned_cols=145 Identities=30% Similarity=0.424 Sum_probs=124.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------------HhHHHHHHHHhhcCCCccceeeeeeccCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~ 494 (596)
.++|...+.||+|+||.||+|. ..+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 4679999999999999999852 13678999999999999999999997765
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC---cEEEecccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---VAHLSDFSI 571 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~---~~kl~dfGl 571 (596)
.|+||||+++|+|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++ .+||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 799999999999999987653 6889999999999999999999 88999999999999998765 499999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++..... .......||+.|+||
T Consensus 164 ~~~~~~~---~~~~~~~gt~~y~aP 185 (322)
T 2ycf_A 164 SKILGET---SLMRTLCGTPTYLAP 185 (322)
T ss_dssp CEECCCC---HHHHHHHSCCTTCCH
T ss_pred ceecccc---cccccccCCcCccCc
Confidence 9876422 122345799999998
No 301
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.87 E-value=9.5e-23 Score=210.56 Aligned_cols=147 Identities=26% Similarity=0.381 Sum_probs=125.8
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccC-----Cee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE-----EFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 496 (596)
.++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 4589999999999999999852 4577899999999999999999998654 368
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+||||++ |+|.+++... .+++.++..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 99999997 5999998765 4889999999999999999999 8999999999999999999999999999998754
Q ss_pred CCCC-ccccccccccccccCC
Q 036342 577 GEDQ-SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~-~~~~~~~~gt~~y~aP 596 (596)
.... .......+||++|+||
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aP 200 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAP 200 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCH
T ss_pred CCCCccccccccccccCCCCC
Confidence 2211 1112345899999998
No 302
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.87 E-value=3.5e-23 Score=205.41 Aligned_cols=148 Identities=26% Similarity=0.422 Sum_probs=124.6
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeec--cCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCS--NEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~l 498 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++. .++..|+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 4689999999999999999852 35778999999999999999999874 4568999
Q ss_pred EEecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHhccCCCc-----eEeCCCCCCCeeeCCCCcEEEeccc
Q 036342 499 VLEYMPHGSLEKYLYSSN---CILDIFQRLNIMIDVASALEYLHFGYSAL-----VIHCDLKPSNVLLDDNMVAHLSDFS 570 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~~~~-----i~Hrdlk~~NILl~~~~~~kl~dfG 570 (596)
||||+++|+|.+++.... ..+++..++.++.|++.|+.||| ..+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999987532 34899999999999999999999 666 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccccccCC
Q 036342 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+++...... .......||+.|+||
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aP 185 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSP 185 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCH
T ss_pred hheeecccc--ccccccCCCccccCh
Confidence 998754321 122345789999998
No 303
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.87 E-value=9.1e-23 Score=204.54 Aligned_cols=146 Identities=26% Similarity=0.427 Sum_probs=127.6
Q ss_pred ccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEe
Q 036342 445 DEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLE 501 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e 501 (596)
++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 579999999999999999852 346789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 502 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
|++ |+|.+++.... ..+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 158 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 158 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc
Confidence 997 69999998754 45789999999999999999999 88999999999999999999999999999987643221
Q ss_pred ccccccccccccccCC
Q 036342 581 SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~~~~~~~gt~~y~aP 596 (596)
......||+.|+||
T Consensus 159 --~~~~~~~~~~y~aP 172 (299)
T 2r3i_A 159 --TYTHEVVTLWYRAP 172 (299)
T ss_dssp --CTTSCBCCCTTCCH
T ss_pred --ccCcccccccccCc
Confidence 22345789999998
No 304
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.87 E-value=7.1e-23 Score=207.22 Aligned_cols=150 Identities=23% Similarity=0.325 Sum_probs=124.4
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeec----cCCeeEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCS----NEEFKAL 498 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~----~~~~~~l 498 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++. .....|+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 4689999999999999999752 45778999999999999999999986 3447899
Q ss_pred EEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 499 VLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
||||+++|+|.+++.. ....+++.+++.++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999876 3456899999999999999999999 889999999999999999999999999998764
Q ss_pred CCCCCc-------cccccccccccccCC
Q 036342 576 TGEDQS-------MTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~-------~~~~~~~gt~~y~aP 596 (596)
...... .......||+.|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 212 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAP 212 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred ccccccccccccccccccccCCcccCCH
Confidence 321110 011234679999998
No 305
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.87 E-value=5e-23 Score=214.81 Aligned_cols=146 Identities=27% Similarity=0.425 Sum_probs=120.0
Q ss_pred cccccccccccCCCceeehhhH----------------HhHHHHHHHHhhcCCCccceeeeeeccCC------eeEEEEe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------KSFDVECEMMKSIRHRNLIKVISSCSNEE------FKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~------~~~lV~e 501 (596)
..+|...+.||+|+||+||+|. +...+|++++++++|||||++++++...+ ..|+|||
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 4579999999999999999863 12347999999999999999999985432 3789999
Q ss_pred cCCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC-CCCcEEEeccccccccCC
Q 036342 502 YMPHGSLEKYLY---SSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 502 ~~~~g~L~~~l~---~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~-~~~~~kl~dfGla~~~~~ 577 (596)
|++++ +.+.+. .....+++..+..++.|+++|++||| ..+|+||||||+|||++ .++.+||+|||+|+....
T Consensus 119 ~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 119 YVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp CCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred ccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 99875 433332 22346889999999999999999999 89999999999999999 799999999999987643
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ......||++|+||
T Consensus 195 ~~---~~~~~~~t~~y~aP 210 (394)
T 4e7w_A 195 GE---PNVSYICSRYYRAP 210 (394)
T ss_dssp TC---CCCSSCSCGGGCCH
T ss_pred CC---CCcccccCcCccCH
Confidence 22 22346789999998
No 306
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.87 E-value=7.3e-23 Score=225.84 Aligned_cols=141 Identities=26% Similarity=0.427 Sum_probs=117.0
Q ss_pred ccccCCCceeehhh-------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEEecCCC
Q 036342 451 NLIGRGGFALFIRA-------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVLEYMPH 505 (596)
Q Consensus 451 ~~ig~G~~g~v~~~-------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~e~~~~ 505 (596)
+.||+|+||.||+| .+.+.+|++++++++|||||++++++..+ ..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~-~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CEEEEEEccCC
Confidence 57999999999975 14578999999999999999999999654 57899999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC-cccc
Q 036342 506 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ-SMTQ 584 (596)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~-~~~~ 584 (596)
|+|.+++.... .+++..+..++.||+.|++||| ..+|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 99999997654 6889999999999999999999 88999999999999999999999999999987643322 1122
Q ss_pred ccccccccccCC
Q 036342 585 TQTLGTIGYMAP 596 (596)
Q Consensus 585 ~~~~gt~~y~aP 596 (596)
....+|+.|+||
T Consensus 530 ~~~~~t~~y~AP 541 (635)
T 4fl3_A 530 THGKWPVKWYAP 541 (635)
T ss_dssp -----CGGGSCH
T ss_pred cCCCCceeeeCh
Confidence 334678899998
No 307
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.87 E-value=8.6e-23 Score=203.74 Aligned_cols=147 Identities=25% Similarity=0.309 Sum_probs=115.5
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
..++|+..+.||+|+||.||++. +.+..+...++.++||||+++++++..++..|+|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 35689999999999999999852 1233445568889999999999999999999999
Q ss_pred EecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 500 LEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
|||++ |+|.+++.. ....+++..+..++.|++.|+.||| .. +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99997 588877754 3456899999999999999999999 76 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......||+.|+||
T Consensus 161 ~~~~---~~~~~~~t~~y~aP 178 (290)
T 3fme_A 161 VDDV---AKDIDAGCKPYMAP 178 (290)
T ss_dssp ------------CCCCCCSCH
T ss_pred cccc---cccccCCCccccCh
Confidence 4321 22335799999998
No 308
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.87 E-value=3e-23 Score=215.42 Aligned_cols=144 Identities=17% Similarity=0.272 Sum_probs=117.2
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHH---HHHhhcCCCccceee-------e
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVEC---EMMKSIRHRNLIKVI-------S 488 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~---~~l~~l~H~niv~l~-------~ 488 (596)
..++|...+.||+|+||.||+|. +.+.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 35789999999999999999852 4567899 556666899999998 5
Q ss_pred eeccCC-----------------eeEEEEecCCCCCHHHHHhhCCC------CCCHHHHHHHHHHHHHHHHHHhccCCCc
Q 036342 489 SCSNEE-----------------FKALVLEYMPHGSLEKYLYSSNC------ILDIFQRLNIMIDVASALEYLHFGYSAL 545 (596)
Q Consensus 489 ~~~~~~-----------------~~~lV~e~~~~g~L~~~l~~~~~------~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 545 (596)
++..++ ..|+||||+ +|+|.+++..... .+++..++.++.|++.||+||| +.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCC
Confidence 544432 278999999 6899999986431 2235788889999999999999 889
Q ss_pred eEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 546 VIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 546 i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+||||||+|||++.++.+||+|||+++.... .....+| +.|+||
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 271 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPP 271 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCH
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccCh
Confidence 99999999999999999999999999986421 2334577 999998
No 309
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.87 E-value=1e-22 Score=207.04 Aligned_cols=153 Identities=20% Similarity=0.334 Sum_probs=126.7
Q ss_pred HHHHHhccccccc-ccccCCCceeehhhH-----------------------HhHHHHHHHHhhcC-CCccceeeeeecc
Q 036342 438 LELCRATDEFSEN-NLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIR-HRNLIKVISSCSN 492 (596)
Q Consensus 438 ~~~~~~~~~~~~~-~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~-H~niv~l~~~~~~ 492 (596)
...+.-.+.|... +.||+|+||.||+|. ..+.+|+.++++++ ||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3444455677776 899999999999852 45788999999995 6999999999999
Q ss_pred CCeeEEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEec
Q 036342 493 EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSD 568 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~d 568 (596)
.+..|+||||+++|+|.+++... ...+++.++..++.|++.|++||| ..+|+||||||+||+++. ++.+||+|
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999999998654 246899999999999999999999 889999999999999987 78999999
Q ss_pred cccccccCCCCCccccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||+++...... ......||+.|+||
T Consensus 178 fg~a~~~~~~~---~~~~~~gt~~y~aP 202 (327)
T 3lm5_A 178 FGMSRKIGHAC---ELREIMGTPEYLAP 202 (327)
T ss_dssp GGGCEEC------------CCCGGGCCH
T ss_pred CccccccCCcc---ccccccCCcCccCC
Confidence 99998764321 22345799999998
No 310
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=7.1e-22 Score=213.72 Aligned_cols=188 Identities=26% Similarity=0.332 Sum_probs=118.7
Q ss_pred CCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEec
Q 036342 35 TLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGL 114 (596)
Q Consensus 35 ~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 114 (596)
+|+.|+|++|.|++ +|... .++|++|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l---~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL---PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC---CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH---cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 67777777777764 44321 256777777777776 455 335677777777777766 344 444 6777777
Q ss_pred CCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEcc
Q 036342 115 DENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLG 194 (596)
Q Consensus 115 ~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 194 (596)
++|.+++++. .+++|+.|++++|.|+++ |. ..++|++|+|++|+|++ +|. |. ++|+.|+|+
T Consensus 128 s~N~l~~lp~---------~l~~L~~L~Ls~N~l~~l-p~-----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls 188 (571)
T 3cvr_A 128 DNNQLTMLPE---------LPALLEYINADNNQLTML-PE-----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVS 188 (571)
T ss_dssp CSSCCSCCCC---------CCTTCCEEECCSSCCSCC-CC-----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECC
T ss_pred CCCcCCCCCC---------cCccccEEeCCCCccCcC-CC-----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECc
Confidence 7777766321 356677777777777652 32 12567777777777766 444 44 677777777
Q ss_pred CCcccCCCCccccCCCCC-------CeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCC
Q 036342 195 GNKLNGSIPITLGKLRKL-------QRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLA 258 (596)
Q Consensus 195 ~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 258 (596)
+|.|+ .+|. |.. +| +.|+|++|.|+ .+|..+..+++|+.|+|++|++++.+|..+..++
T Consensus 189 ~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 189 TNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp SSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred CCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 77777 3443 433 55 77777777777 5666666677777777777777777777666543
No 311
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.87 E-value=9.2e-23 Score=214.61 Aligned_cols=146 Identities=26% Similarity=0.434 Sum_probs=119.4
Q ss_pred cccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeecc----C--CeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSN----E--EFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~----~--~~~~lV~ 500 (596)
..+|+..+.||+|+||+||+|. +...+|++++++++|||||+++++|.. . ...++||
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~ 132 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVL 132 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeeh
Confidence 3478999999999999999863 224579999999999999999998843 2 2467999
Q ss_pred ecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC-CcEEEeccccccccC
Q 036342 501 EYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN-MVAHLSDFSIAKLLT 576 (596)
Q Consensus 501 e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~-~~~kl~dfGla~~~~ 576 (596)
||+++ ++.+.+.. ....+++..+..++.|+++||.||| ..+|+||||||+|||++.+ +.+||+|||+++.+.
T Consensus 133 e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 133 DYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp ECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred hcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 99976 66665542 3456899999999999999999999 8999999999999999955 678999999998764
Q ss_pred CCCCccccccccccccccCC
Q 036342 577 GEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~~~~~~~gt~~y~aP 596 (596)
... .....+||++|+||
T Consensus 209 ~~~---~~~~~~~t~~y~aP 225 (420)
T 1j1b_A 209 RGE---PNVSYICSRYYRAP 225 (420)
T ss_dssp TTC---CCCSCCSCTTSCCH
T ss_pred cCC---CceeeeeCCCcCCH
Confidence 322 22346789999998
No 312
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.87 E-value=5.8e-23 Score=203.80 Aligned_cols=145 Identities=32% Similarity=0.452 Sum_probs=119.6
Q ss_pred cccccccccccCCCceeehhhH-----------------HhHHHHHHHHhhcCCCccceeeeeeccC-CeeEEEEecCCC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------KSFDVECEMMKSIRHRNLIKVISSCSNE-EFKALVLEYMPH 505 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------~~~~~e~~~l~~l~H~niv~l~~~~~~~-~~~~lV~e~~~~ 505 (596)
.++|+..+.||+|+||.||++. +.+.+|+.++++++||||+++++++... +..|+||||+++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 99 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAK 99 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTT
T ss_pred hhhceEEeEEecCCCceEEEEEEcCCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCC
Confidence 5689999999999999999852 4678999999999999999999997654 478999999999
Q ss_pred CCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCcccc
Q 036342 506 GSLEKYLYSSNC-ILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQ 584 (596)
Q Consensus 506 g~L~~~l~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~ 584 (596)
|+|.+++..... .+++..+..++.|++.|+.||| ..+++||||||+||+++.++.+||+|||+++..... .
T Consensus 100 ~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-----~ 171 (278)
T 1byg_A 100 GSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-----Q 171 (278)
T ss_dssp EEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeecccccccccc-----c
Confidence 999999976532 3788899999999999999999 889999999999999999999999999998865322 1
Q ss_pred ccccccccccCC
Q 036342 585 TQTLGTIGYMAP 596 (596)
Q Consensus 585 ~~~~gt~~y~aP 596 (596)
....+++.|+||
T Consensus 172 ~~~~~~~~y~aP 183 (278)
T 1byg_A 172 DTGKLPVKWTAP 183 (278)
T ss_dssp ----CCTTTSCH
T ss_pred cCCCccccccCH
Confidence 234678899998
No 313
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.87 E-value=1.4e-22 Score=209.84 Aligned_cols=143 Identities=26% Similarity=0.370 Sum_probs=114.8
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCC------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE------ 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~------ 494 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 4689999999999999999852 34678999999999999999999997654
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
..|+||||++ |+|.+.+.. .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 6899999997 478888853 4789999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......+||+.|+||
T Consensus 177 ~~~~---~~~~~~~gt~~y~aP 195 (371)
T 2xrw_A 177 AGTS---FMMTPYVVTRYYRAP 195 (371)
T ss_dssp ----------------CTTCCH
T ss_pred cccc---cccCCceecCCccCH
Confidence 5322 123346799999998
No 314
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.87 E-value=6.2e-23 Score=211.90 Aligned_cols=142 Identities=26% Similarity=0.394 Sum_probs=107.1
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccC------C
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE------E 494 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~------~ 494 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 4689999999999999999862 3566899999999999999999998654 4
Q ss_pred eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
..|+|+||+ +++|.+++... .+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 579999999 78999988763 5889999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ....+||++|+||
T Consensus 182 ~~~~-----~~~~~~t~~y~aP 198 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAP 198 (367)
T ss_dssp --------------CCCTTCCH
T ss_pred cccc-----CCCcCcCcCccCh
Confidence 5321 2346799999998
No 315
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.87 E-value=2.3e-22 Score=201.20 Aligned_cols=150 Identities=23% Similarity=0.356 Sum_probs=125.6
Q ss_pred hcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeee-ccCCeeEEEEec
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSC-SNEEFKALVLEY 502 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~ 502 (596)
..++|+..+.||+|+||.||+|. +.+.+|+.++++++|++++..++++ ..++..++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 35789999999999999999863 3578999999999999888777766 556778999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccCCCC
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~~~~ 579 (596)
+ +|+|.+++......+++..+..++.|++.|+.||| +.+|+||||||+||++ ++++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9 99999999876667899999999999999999999 8899999999999999 788999999999998765432
Q ss_pred Cc-----cccccccccccccCC
Q 036342 580 QS-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~-----~~~~~~~gt~~y~aP 596 (596)
.. .......||+.|+||
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCH
T ss_pred cCccCCCCcccccCCCccccch
Confidence 21 122346799999998
No 316
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.87 E-value=1.1e-22 Score=208.07 Aligned_cols=148 Identities=26% Similarity=0.365 Sum_probs=124.6
Q ss_pred HhcccccccccccCCCceeehhhH----------------------HhHHHHHHH-HhhcCCCccceeeeeeccCCeeEE
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEM-MKSIRHRNLIKVISSCSNEEFKAL 498 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~-l~~l~H~niv~l~~~~~~~~~~~l 498 (596)
...++|+..+.||+|+||.||+|. ..+..|..+ ++.++||||+++++++..++..|+
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 345689999999999999999852 234445554 788999999999999999999999
Q ss_pred EEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 499 VLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 499 V~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
||||+++ +|.+++.. ....+++..+..++.|++.|+.||| .. +|+||||||+||+++.++.+||+|||+++.
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 9999975 99888864 3457899999999999999999999 76 899999999999999999999999999987
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... .......||+.|+||
T Consensus 204 ~~~~---~~~~~~~gt~~y~aP 222 (340)
T 3an0_A 204 LVDS---VAKTIDAGCKPYMAP 222 (340)
T ss_dssp HSCH---HHHHHSSCCCCCCCH
T ss_pred cccc---cccccCCCCccccCc
Confidence 6421 122335799999998
No 317
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2e-21 Score=184.05 Aligned_cols=180 Identities=22% Similarity=0.208 Sum_probs=92.6
Q ss_pred CEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 37 KFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 37 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
+.++++++.++ .+|... .++|++|+|++|++++..+..|.++++|++|+|++|+|+++.+..|.++++|++|++++
T Consensus 10 ~~v~c~~~~l~-~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCcc-CCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 34555555554 222211 34566666666666654444555666666666666666655555555666666666666
Q ss_pred CcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCC
Q 036342 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGN 196 (596)
Q Consensus 117 N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 196 (596)
|.++.+++. .|.++++|++|++++|++++. .+..|..+++|++|++++|
T Consensus 86 n~l~~~~~~-----~~~~l~~L~~L~L~~N~l~~~--------------------------~~~~~~~l~~L~~L~l~~N 134 (208)
T 2o6s_A 86 NQLQSLPNG-----VFDKLTQLKELALNTNQLQSL--------------------------PDGVFDKLTQLKDLRLYQN 134 (208)
T ss_dssp SCCCCCCTT-----TTTTCTTCCEEECCSSCCCCC--------------------------CTTTTTTCTTCCEEECCSS
T ss_pred CcCCccCHh-----HhcCccCCCEEEcCCCcCccc--------------------------CHhHhccCCcCCEEECCCC
Confidence 655554332 244555555555555554432 2333444445555555555
Q ss_pred cccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCC
Q 036342 197 KLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLA 258 (596)
Q Consensus 197 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 258 (596)
.+++..+..|..+++|++|++++|.+.+ .+++|++|+++.|+++|.+|..++.++
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 135 QLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 5554444444555555555555554432 223455555555555555555554443
No 318
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=212.34 Aligned_cols=148 Identities=22% Similarity=0.332 Sum_probs=110.3
Q ss_pred ccccc-cccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeec--cCCeeEEEE
Q 036342 445 DEFSE-NNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCS--NEEFKALVL 500 (596)
Q Consensus 445 ~~~~~-~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~--~~~~~~lV~ 500 (596)
+.|+. .+.||+|+||.||+|. +.+.+|+.++++++|||||++++++. .+...|+||
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 44655 4689999999999863 35779999999999999999999994 467899999
Q ss_pred ecCCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee----CCCCcEEEec
Q 036342 501 EYMPHGSLEKYLYSSN--------CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL----DDNMVAHLSD 568 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~--------~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl----~~~~~~kl~d 568 (596)
||++ |+|.+++.... ..+++..+..++.|++.||.||| ..+|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 58888875321 24889999999999999999999 8899999999999999 6789999999
Q ss_pred cccccccCCCCC-ccccccccccccccCC
Q 036342 569 FSIAKLLTGEDQ-SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~-~~~~~~~~gt~~y~aP 596 (596)
||+|+....... .......+||++|+||
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAP 204 (405)
T ss_dssp TTCCC----------------CCCTTCCH
T ss_pred CCCceecCCCCcccccCCCceecCcccCc
Confidence 999987643211 1223446899999998
No 319
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=2.6e-21 Score=209.35 Aligned_cols=149 Identities=24% Similarity=0.326 Sum_probs=94.8
Q ss_pred CCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeE
Q 036342 136 KSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRL 215 (596)
Q Consensus 136 ~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 215 (596)
++|+.|++++|.|++ +|. +. .+|++|+|++|.|++ +|. .+++|+.|++++|.+++ +|. .+++|++|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~--l~---~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L 165 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE--LP---ASLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVL 165 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC--CC---TTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEE
T ss_pred CCCCEEEccCCCCCC-cch--hh---cCCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEE
Confidence 445555555555544 222 11 245555555555554 333 45666677777776665 333 45667777
Q ss_pred EccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCC-------cEEEeCCCcccCCCcccccccccceEEc
Q 036342 216 NLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASL-------RILSLGSNKLTSIPLTFWNLKDILQLNF 288 (596)
Q Consensus 216 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~ip~~~~~l~~L~~L~l 288 (596)
+|++|.|++ +|. +. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|.|+.+|..+..+++|+.|+|
T Consensus 166 ~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~L 237 (571)
T 3cvr_A 166 SVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITHIPENILSLDPTCTIIL 237 (571)
T ss_dssp ECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCCCCGGGGGSCTTEEEEC
T ss_pred ECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcceecCHHHhcCCCCCEEEe
Confidence 777777764 555 44 66777777777776 4444 443 55 8888888888888888888888888888
Q ss_pred ccCCCCCchhhhhccccc
Q 036342 289 SSNFLTGPLLLEIGNLKV 306 (596)
Q Consensus 289 s~N~l~~~~~~~~~~l~~ 306 (596)
++|++++..|..+..++.
T Consensus 238 ~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 238 EDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp CSSSCCHHHHHHHHHHHH
T ss_pred eCCcCCCcCHHHHHHhhc
Confidence 888888888887776554
No 320
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.86 E-value=3.1e-22 Score=205.67 Aligned_cols=147 Identities=24% Similarity=0.386 Sum_probs=123.8
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeeccC-----Cee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSNE-----EFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~-----~~~ 496 (596)
.++|...+.||+|+||.||+|. ..+.+|+.++++++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 4689999999999999999852 3466899999999999999999988654 578
Q ss_pred EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccC
Q 036342 497 ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
|+||||++ |+|.+++... .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 6999998774 5889999999999999999999 8899999999999999999999999999998764
Q ss_pred CCCCcc--------ccccccccccccCC
Q 036342 577 GEDQSM--------TQTQTLGTIGYMAP 596 (596)
Q Consensus 577 ~~~~~~--------~~~~~~gt~~y~aP 596 (596)
...... .....+||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAP 191 (353)
T ss_dssp ----------------CCCCCCGGGCCH
T ss_pred cccccccCccccccchhhccccccccCC
Confidence 321110 12235789999998
No 321
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.86 E-value=3.4e-22 Score=203.77 Aligned_cols=150 Identities=25% Similarity=0.330 Sum_probs=114.8
Q ss_pred hcccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcC-CCccceeeeeec--------c
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIR-HRNLIKVISSCS--------N 492 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~-H~niv~l~~~~~--------~ 492 (596)
...+|...+.||+|+||.||++. +.+.+|+.+++++. ||||+++++++. .
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 34589999999999999999852 45778999999996 999999999983 3
Q ss_pred CCeeEEEEecCCCCCHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHhccCCCc--eEeCCCCCCCeeeCCCCcEEEec
Q 036342 493 EEFKALVLEYMPHGSLEKYLYS--SNCILDIFQRLNIMIDVASALEYLHFGYSAL--VIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 493 ~~~~~lV~e~~~~g~L~~~l~~--~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~--i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
....++||||++ |+|.+++.. ....+++..++.++.|++.|+.||| ..+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 446899999995 799998865 3346899999999999999999999 877 99999999999999999999999
Q ss_pred cccccccCCCCCcc----------ccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSM----------TQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~----------~~~~~~gt~~y~aP 596 (596)
||+++......... ......||+.|+||
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219 (337)
T ss_dssp CTTCBCCSSCC---------------------------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCCh
Confidence 99998764322110 11135689999998
No 322
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.1e-21 Score=183.88 Aligned_cols=181 Identities=22% Similarity=0.274 Sum_probs=137.0
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccC
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGM 92 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 92 (596)
+.++++++.++. +|..+ .++|++|+|++|+++ .++...+..+++|++|+|++|++++..+..|.++++|++|+|++
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLK-SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccC-cCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 567888888763 44443 457888888888887 44444445578888888888888866666677888888888888
Q ss_pred CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcccc
Q 036342 93 NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNC 172 (596)
Q Consensus 93 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n 172 (596)
|+|+++.+..|.++++|++|++++|.++.+++. .|.++++|+.|++++|.+++..+. .+..+ ++|++|++++|
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l-~~L~~L~l~~N 158 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDG-----VFDKLTQLKDLRLYQNQLKSVPDG-VFDRL-TSLQYIWLHDN 158 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCEEECCSSCCSCCCTT-TTTTC-TTCCEEECCSC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHh-----HhccCCcCCEEECCCCccceeCHH-HhccC-CCccEEEecCC
Confidence 888877777788888888888888888876554 467888888888888888765443 56666 67888888888
Q ss_pred ccccccChhccCCCCCCEEEccCCcccCCCCccccCCCC
Q 036342 173 NISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRK 211 (596)
Q Consensus 173 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 211 (596)
.+.+ .+++|+.|+++.|.++|.+|..++.++.
T Consensus 159 ~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 159 PWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred Ceec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 7754 3557888888888888888888877664
No 323
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.86 E-value=8.1e-23 Score=210.09 Aligned_cols=148 Identities=16% Similarity=0.238 Sum_probs=125.4
Q ss_pred ccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccce---------------
Q 036342 445 DEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIK--------------- 485 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~--------------- 485 (596)
++|...+.||+|+||.||+|. +.+.+|+.++++++|||||+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 689999999999999999862 24789999999999999998
Q ss_pred eeeeecc-CCeeEEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC-
Q 036342 486 VISSCSN-EEFKALVLEYMPHGSLEKYLYSS-NCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM- 562 (596)
Q Consensus 486 l~~~~~~-~~~~~lV~e~~~~g~L~~~l~~~-~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~- 562 (596)
+++++.. ++..|+||||+ +|+|.+++... ...+++..+..++.|++.|+.||| ..+|+||||||+||+++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~ 197 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQ 197 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCC
Confidence 5666655 67889999999 99999999875 246899999999999999999999 88999999999999999998
Q ss_pred -cEEEeccccccccCCCCCc-----cccccccccccccCC
Q 036342 563 -VAHLSDFSIAKLLTGEDQS-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 563 -~~kl~dfGla~~~~~~~~~-----~~~~~~~gt~~y~aP 596 (596)
.+||+|||+++.+...... .......||+.|+||
T Consensus 198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 237 (352)
T 2jii_A 198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM 237 (352)
T ss_dssp EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH
T ss_pred ceEEEecCcceeeccCCCccccccccccccccCCccccCH
Confidence 9999999999876432111 112335799999998
No 324
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.86 E-value=4.8e-22 Score=211.84 Aligned_cols=149 Identities=20% Similarity=0.295 Sum_probs=126.0
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCC-ccceeeeeeccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHR-NLIKVISSCSNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lV~e~~ 503 (596)
.++|...+.||+|+||.||+|. ..+..|+++++.++|+ +++.+..++...+..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4689999999999999999863 3578999999999885 5555556666778899999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccCCCCC
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~~~~~ 580 (596)
+|+|.+++......+++..++.++.||+.||.||| ..+|+||||||+|||+ +.++.+||+|||+++.+.....
T Consensus 86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99999999876667999999999999999999999 8899999999999999 5889999999999987654322
Q ss_pred c-----cccccccccccccCC
Q 036342 581 S-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~-----~~~~~~~gt~~y~aP 596 (596)
. ......+||+.|+||
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aP 182 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASV 182 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCH
T ss_pred ccccccccccccCCCccccCH
Confidence 1 112356899999997
No 325
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.6e-22 Score=225.89 Aligned_cols=140 Identities=22% Similarity=0.394 Sum_probs=120.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe-----
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF----- 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 495 (596)
.++|...+.||+|+||.||++. ..+.+|+.++++++|||||++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 3689999999999999999852 346789999999999999999999987654
Q ss_pred eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
.|+||||+++++|.+++.. .+++.+++.++.|+++||.|+| ..+|+||||||+|||++.+ .+||+|||+++..
T Consensus 159 ~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~ 231 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRI 231 (681)
T ss_dssp EEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEET
T ss_pred eEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhc
Confidence 6999999999999988754 5889999999999999999999 8899999999999999986 8999999999875
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
... ....||++||||
T Consensus 232 ~~~------~~~~gt~~y~aP 246 (681)
T 2pzi_A 232 NSF------GYLYGTPGFQAP 246 (681)
T ss_dssp TCC------SCCCCCTTTSCT
T ss_pred ccC------CccCCCccccCH
Confidence 422 345799999998
No 326
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.86 E-value=3.9e-22 Score=210.38 Aligned_cols=144 Identities=19% Similarity=0.340 Sum_probs=124.5
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhc------CCCccceeeeeeccCCeeE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSI------RHRNLIKVISSCSNEEFKA 497 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l------~H~niv~l~~~~~~~~~~~ 497 (596)
..+|+..+.||+|+||.||+|. +.+..|+.+++.+ +|+||+++++++..++..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 4579999999999999999862 3466788888877 5779999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc--EEEeccccccc
Q 036342 498 LVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV--AHLSDFSIAKL 574 (596)
Q Consensus 498 lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~--~kl~dfGla~~ 574 (596)
+||||++ |+|.+++.... ..+++..+..++.|++.||+||| ..+|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 69999988754 35899999999999999999999 889999999999999999887 99999999976
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ....+||+.|+||
T Consensus 252 ~~~~-----~~~~~gt~~y~aP 268 (429)
T 3kvw_A 252 EHQR-----VYTYIQSRFYRAP 268 (429)
T ss_dssp TTCC-----CCSSCSCGGGCCH
T ss_pred cCCc-----ccccCCCCCccCh
Confidence 4321 2346799999998
No 327
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.86 E-value=5e-22 Score=198.78 Aligned_cols=149 Identities=23% Similarity=0.358 Sum_probs=126.8
Q ss_pred cccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcCCCccceeeeee-ccCCeeEEEEecC
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIRHRNLIKVISSC-SNEEFKALVLEYM 503 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~H~niv~l~~~~-~~~~~~~lV~e~~ 503 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++|++++..+.++ ..++..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 4689999999999999999863 3578999999999999877777666 4566789999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee---CCCCcEEEeccccccccCCCCC
Q 036342 504 PHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL---DDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 504 ~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl---~~~~~~kl~dfGla~~~~~~~~ 580 (596)
+|+|.+++......+++..+..++.|++.|+.||| +.+|+||||||+||++ ++++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 99999999866667899999999999999999999 8899999999999999 4789999999999987654322
Q ss_pred c-----cccccccccccccCC
Q 036342 581 S-----MTQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~-----~~~~~~~gt~~y~aP 596 (596)
. .......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCH
T ss_pred ccccccccccccccccccCCh
Confidence 1 112346799999998
No 328
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.86 E-value=2.8e-22 Score=207.54 Aligned_cols=141 Identities=25% Similarity=0.371 Sum_probs=119.5
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCee----
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFK---- 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~---- 496 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 4689999999999999999852 4567899999999999999999999877654
Q ss_pred --EEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 497 --ALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 497 --~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
|+||||++ |+|.+++.. .+++..+..++.|++.|++||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 688888743 4789999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ....+||++|+||
T Consensus 194 ~~~~-----~~~~~~t~~y~aP 210 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAP 210 (371)
T ss_dssp -----------CTTCCCTTSCH
T ss_pred cccC-----cCCcccCccccCH
Confidence 5322 2346789999998
No 329
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.86 E-value=1.2e-22 Score=210.48 Aligned_cols=144 Identities=9% Similarity=0.040 Sum_probs=104.7
Q ss_pred cccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc--CCCccceeee-------ee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI--RHRNLIKVIS-------SC 490 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l--~H~niv~l~~-------~~ 490 (596)
..+|...+.||+|+||.||+|. +.+..|+.+++.+ +|||||+++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 4568999999999999999852 2455675444444 6999888653 33
Q ss_pred ccC-----------------CeeEEEEecCCCCCHHHHHhhCCCCCCHHHH------HHHHHHHHHHHHHHhccCCCceE
Q 036342 491 SNE-----------------EFKALVLEYMPHGSLEKYLYSSNCILDIFQR------LNIMIDVASALEYLHFGYSALVI 547 (596)
Q Consensus 491 ~~~-----------------~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~------~~i~~~i~~~l~~lh~~~~~~i~ 547 (596)
..+ ...|+|||||+ |+|.+++......+++..+ ..++.|+++|++||| ..+|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 221 33799999998 8999999875434455555 677899999999999 89999
Q ss_pred eCCCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 548 HCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 548 Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||||||+|||++.++.+||+|||+|+..... .....+|+.|+||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aP 260 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPR 260 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcCh
Confidence 9999999999999999999999999875321 1134677999998
No 330
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.86 E-value=4.9e-22 Score=201.04 Aligned_cols=147 Identities=27% Similarity=0.400 Sum_probs=116.3
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCccceeeeeec-----------
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRNLIKVISSCS----------- 491 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~niv~l~~~~~----------- 491 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 3579999999999999999852 45778999999999999999999874
Q ss_pred ---cCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC-CCCcEEEe
Q 036342 492 ---NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAHLS 567 (596)
Q Consensus 492 ---~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~-~~~~~kl~ 567 (596)
..+..|+||||++ |+|.+++... .+++..+..++.|++.|++||| ..+|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3457899999997 6999998653 5789999999999999999999 88999999999999997 56799999
Q ss_pred ccccccccCCCCC-ccccccccccccccCC
Q 036342 568 DFSIAKLLTGEDQ-SMTQTQTLGTIGYMAP 596 (596)
Q Consensus 568 dfGla~~~~~~~~-~~~~~~~~gt~~y~aP 596 (596)
|||+++....... ........+|+.|+||
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 193 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCH
T ss_pred cCccccccCCCcccccccccccccccccCc
Confidence 9999987642211 1112345679999998
No 331
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.86 E-value=4.4e-22 Score=198.45 Aligned_cols=146 Identities=23% Similarity=0.415 Sum_probs=126.8
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|+..+.||+|+||.||+|. +.+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 4689999999999999999852 35778999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC---CcEEEeccccccccCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN---MVAHLSDFSIAKLLTG 577 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~---~~~kl~dfGla~~~~~ 577 (596)
||+++++|.+++.... .+++..+..++.|++.|+.||| ..+++||||||+||+++.+ +.+||+|||+++....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999887654 5889999999999999999999 8899999999999999754 4799999999987543
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
.. ......||+.|+||
T Consensus 177 ~~---~~~~~~~~~~y~aP 192 (287)
T 2wei_A 177 NT---KMKDRIGTAYYIAP 192 (287)
T ss_dssp CS---SCSCHHHHHTTCCH
T ss_pred CC---ccccccCcccccCh
Confidence 22 12334688999998
No 332
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.86 E-value=1.6e-22 Score=218.69 Aligned_cols=135 Identities=19% Similarity=0.223 Sum_probs=105.2
Q ss_pred cccccccCCCceeehhh---------------------------HHhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 448 SENNLIGRGGFALFIRA---------------------------FKSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 448 ~~~~~ig~G~~g~v~~~---------------------------~~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
...+.||+|+||.||++ .+.+.+|++++++++||||+++..++..++..|+||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 44678999999999953 134689999999999999996666665667789999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccccCCCCC
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQ 580 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~ 580 (596)
||+++|+|.+++.. +..++.|+++|+.||| +.+|+||||||+|||++. .+||+|||+++.......
T Consensus 419 E~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 419 SYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp ECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred ECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 99999999999865 4578999999999999 899999999999999999 999999999998643211
Q ss_pred cc-----ccccccccccccCC
Q 036342 581 SM-----TQTQTLGTIGYMAP 596 (596)
Q Consensus 581 ~~-----~~~~~~gt~~y~aP 596 (596)
.. .....+||+.||||
T Consensus 485 ~~~~~~~~~~~~~GT~~y~AP 505 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFD 505 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHH
T ss_pred cccchhhhhhhhcCCCCcCCH
Confidence 10 12356899999998
No 333
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.85 E-value=6.6e-22 Score=200.87 Aligned_cols=148 Identities=28% Similarity=0.435 Sum_probs=125.7
Q ss_pred HhcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhc---CCCccceeeeeec---
Q 036342 442 RATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSI---RHRNLIKVISSCS--- 491 (596)
Q Consensus 442 ~~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l---~H~niv~l~~~~~--- 491 (596)
...++|+..+.||+|+||.||+|. ..+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 356789999999999999999852 1466788888776 8999999999987
Q ss_pred --cCCeeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEec
Q 036342 492 --NEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 492 --~~~~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
.....++||||++ |+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 4567899999997 69999998754 35889999999999999999999 88999999999999999999999999
Q ss_pred cccccccCCCCCccccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
||+++.... ........||+.|+||
T Consensus 164 fg~~~~~~~---~~~~~~~~~~~~y~aP 188 (326)
T 1blx_A 164 FGLARIYSF---QMALTSVVVTLWYRAP 188 (326)
T ss_dssp CCSCCCCCG---GGGGCCCCCCCTTCCH
T ss_pred CcccccccC---CCCccccccccceeCH
Confidence 999986532 1123446789999998
No 334
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.85 E-value=1.7e-22 Score=204.11 Aligned_cols=155 Identities=23% Similarity=0.419 Sum_probs=124.0
Q ss_pred CHHHHHHhcccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCC--Cccceeeeeec
Q 036342 436 SYLELCRATDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRH--RNLIKVISSCS 491 (596)
Q Consensus 436 ~~~~~~~~~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H--~niv~l~~~~~ 491 (596)
.++.+....++|+..+.||+|+||.||++. +.+.+|+.++++++| |||+++++++.
T Consensus 19 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~ 98 (313)
T 3cek_A 19 YFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI 98 (313)
T ss_dssp -CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE
T ss_pred CeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee
Confidence 333344456789999999999999999852 457789999999984 99999999999
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccc
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSI 571 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGl 571 (596)
.++..|+||| +.+|+|.+++.... .+++..+..++.|+++|+.||| ..+|+||||||+||++++ +.+||+|||+
T Consensus 99 ~~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 99 TDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp CSSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred cCCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccc
Confidence 9999999999 56889999998764 6789999999999999999999 889999999999999965 8999999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++...............||+.|+||
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aP 197 (313)
T 3cek_A 173 ANQMQPDTTSVVKDSQVGTVNYMPP 197 (313)
T ss_dssp SCC--------------CCGGGCCH
T ss_pred cccccCccccccccCCCCCCCcCCH
Confidence 9876433222223345799999998
No 335
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.85 E-value=9e-22 Score=214.62 Aligned_cols=147 Identities=31% Similarity=0.523 Sum_probs=123.9
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHHHHhhcCCCccceeeeeecc------CCe
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECEMMKSIRHRNLIKVISSCSN------EEF 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~------~~~ 495 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|||||++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 3689999999999999999852 357789999999999999999999865 567
Q ss_pred eEEEEecCCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCc---EEEeccc
Q 036342 496 KALVLEYMPHGSLEKYLYSSN--CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMV---AHLSDFS 570 (596)
Q Consensus 496 ~~lV~e~~~~g~L~~~l~~~~--~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~---~kl~dfG 570 (596)
.|+||||+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++.++. +||+|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 899999999999999998743 25788899999999999999999 889999999999999987654 9999999
Q ss_pred cccccCCCCCccccccccccccccCC
Q 036342 571 IAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 571 la~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+++...... ......||++|+||
T Consensus 170 ~a~~~~~~~---~~~~~~gt~~Y~AP 192 (676)
T 3qa8_A 170 YAKELDQGE---LCTEFVGTLQYLAP 192 (676)
T ss_dssp CCCBTTSCC---CCCCCCSCCTTCSS
T ss_pred ccccccccc---ccccccCCcccCCh
Confidence 998764322 22346799999998
No 336
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.85 E-value=5.2e-22 Score=207.34 Aligned_cols=144 Identities=24% Similarity=0.360 Sum_probs=122.0
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcC--------CCccceeeeeec----
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIR--------HRNLIKVISSCS---- 491 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~--------H~niv~l~~~~~---- 491 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 3679999999999999999862 45678999999986 888999999987
Q ss_pred cCCeeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCC-------
Q 036342 492 NEEFKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNM------- 562 (596)
Q Consensus 492 ~~~~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~------- 562 (596)
.....|+||||+ +|++.+++.... ..+++..+..++.|++.||.||| .+ +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 556799999999 667777665543 56899999999999999999999 77 999999999999999775
Q ss_pred ------------------------------------------cEEEeccccccccCCCCCccccccccccccccCC
Q 036342 563 ------------------------------------------VAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 563 ------------------------------------------~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.+||+|||+++..... ....+||+.|+||
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aP 262 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCC
Confidence 7999999999875322 2345799999998
No 337
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.85 E-value=1.2e-21 Score=201.98 Aligned_cols=154 Identities=21% Similarity=0.293 Sum_probs=114.6
Q ss_pred HHHHHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCCccceeeeeeccCC---
Q 036342 438 LELCRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHRNLIKVISSCSNEE--- 494 (596)
Q Consensus 438 ~~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~--- 494 (596)
.+.....++|...+.||+|+||.||+|. ..+..|++.+++++|||||++++++...+
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 4455677899999999999999999852 24667888889999999999999986433
Q ss_pred ----eeEEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC-CCcEEE
Q 036342 495 ----FKALVLEYMPHGSLEKYLYS---SNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD-NMVAHL 566 (596)
Q Consensus 495 ----~~~lV~e~~~~g~L~~~l~~---~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~-~~~~kl 566 (596)
..++||||+++ ++.+.+.. ....+++..+..++.|++.|+.|+| .+..+|+||||||+||+++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 37899999976 55544432 3346788999999999999999999 34678999999999999996 899999
Q ss_pred eccccccccCCCCCccccccccccccccCC
Q 036342 567 SDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 567 ~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+|||+++...... ......||+.|+||
T Consensus 174 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 200 (360)
T 3e3p_A 174 CDFGSAKKLSPSE---PNVAYICSRYYRAP 200 (360)
T ss_dssp CCCTTCBCCCTTS---CCCSTTSCGGGCCH
T ss_pred eeCCCceecCCCC---CcccccCCcceeCH
Confidence 9999998764322 22345789999998
No 338
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.85 E-value=3.4e-22 Score=210.75 Aligned_cols=150 Identities=25% Similarity=0.464 Sum_probs=119.4
Q ss_pred hcccccccccccCCCceeeh-hh----------------HHhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecCC
Q 036342 443 ATDEFSENNLIGRGGFALFI-RA----------------FKSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMP 504 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~-~~----------------~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~ 504 (596)
...+|...+.||+|+||.|| ++ ...+.+|+++++++ +|||||++++++.+++..|+|||||+
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 34578999999999999854 32 13467899999999 89999999999999999999999996
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC-----CCcEEEeccccccccCCCC
Q 036342 505 HGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD-----NMVAHLSDFSIAKLLTGED 579 (596)
Q Consensus 505 ~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~-----~~~~kl~dfGla~~~~~~~ 579 (596)
|+|.+++........+..+..++.|+++|+.||| +.+|+||||||+||+++. ...+||+|||+|+......
T Consensus 102 -g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 102 -ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp -EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred -CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 6999999877655555567789999999999999 889999999999999943 3468899999998764322
Q ss_pred Cc-cccccccccccccCC
Q 036342 580 QS-MTQTQTLGTIGYMAP 596 (596)
Q Consensus 580 ~~-~~~~~~~gt~~y~aP 596 (596)
.. ......+||++|+||
T Consensus 178 ~~~~~~~~~~gt~~y~AP 195 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAP 195 (432)
T ss_dssp --------CCSCTTSCCG
T ss_pred cceeeccccCCCcCccCh
Confidence 11 123446799999998
No 339
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.85 E-value=9.3e-22 Score=200.64 Aligned_cols=144 Identities=17% Similarity=0.330 Sum_probs=125.1
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCc------cceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRN------LIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~ 496 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.+++.++|++ ++++++++..++..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 4689999999999999999752 34678999999988765 99999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---------------
Q 036342 497 ALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD--------------- 560 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~--------------- 560 (596)
|+||||+ +++|.+++.... ..+++..+..++.|++.|++||| ..+|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 9999999 889999998764 35789999999999999999999 889999999999999987
Q ss_pred ----CCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 561 ----NMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 561 ----~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++.+||+|||+++..... .....||+.|+||
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP 203 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAP 203 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCH
T ss_pred ccccCCCceEeeCcccccCccc-----cccccCCccccCh
Confidence 678999999999864322 2345799999998
No 340
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.85 E-value=3e-22 Score=202.14 Aligned_cols=150 Identities=27% Similarity=0.363 Sum_probs=120.3
Q ss_pred HHHHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhc----CCCccceee
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSI----RHRNLIKVI 487 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l----~H~niv~l~ 487 (596)
+.....++|...+.||+|+||.||+|. ..+.+|+.+++++ +||||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 334456789999999999999999862 1234689999998 899999999
Q ss_pred eeeccCCeeEEEEec-CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC-CCCcEE
Q 036342 488 SSCSNEEFKALVLEY-MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAH 565 (596)
Q Consensus 488 ~~~~~~~~~~lV~e~-~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~-~~~~~k 565 (596)
+++..++..++|||| +++++|.+++.... .+++..+..++.|++.|+.||| ..+|+||||||+||+++ .++.+|
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEE
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEE
Confidence 999999999999999 78999999998754 5889999999999999999999 88999999999999999 889999
Q ss_pred EeccccccccCCCCCccccccccccccccCC
Q 036342 566 LSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 566 l~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+|||+++..... ......||+.|+||
T Consensus 181 l~dfg~~~~~~~~----~~~~~~~~~~y~aP 207 (312)
T 2iwi_A 181 LIDFGSGALLHDE----PYTDFDGTRVYSPP 207 (312)
T ss_dssp ECCCSSCEECCSS----CBCCCCSCTTTSCH
T ss_pred EEEcchhhhcccC----cccccCCcccccCc
Confidence 9999999876432 12345789999998
No 341
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.85 E-value=5.9e-22 Score=203.71 Aligned_cols=141 Identities=25% Similarity=0.368 Sum_probs=119.2
Q ss_pred cccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCe-----
Q 036342 444 TDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEF----- 495 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~----- 495 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 3579999999999999999852 356789999999999999999999987654
Q ss_pred -eEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 496 -KALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 496 -~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
.|+||||++ |+|.+++.. .+++..+..++.|++.|+.||| ..+|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 688887743 4789999999999999999999 88999999999999999999999999999986
Q ss_pred cCCCCCccccccccccccccCC
Q 036342 575 LTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 575 ~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... .....||+.|+||
T Consensus 176 ~~~~-----~~~~~~t~~y~aP 192 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAP 192 (353)
T ss_dssp -------------CCSBCCSCH
T ss_pred CCCC-----ccccccCcCcCCH
Confidence 5321 2345789999998
No 342
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.85 E-value=6.8e-22 Score=200.38 Aligned_cols=148 Identities=22% Similarity=0.316 Sum_probs=127.7
Q ss_pred HHhcccccccccccCCCceeehhhH---------------------------HhHHHHHHHHhhcC--CCccceeeeeec
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF---------------------------KSFDVECEMMKSIR--HRNLIKVISSCS 491 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~---------------------------~~~~~e~~~l~~l~--H~niv~l~~~~~ 491 (596)
....++|+..+.||+|+||.||+|. +.+.+|+.++++++ |+||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 3445789999999999999999862 13457999999996 599999999999
Q ss_pred cCCeeEEEEecCCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC-CCCcEEEecc
Q 036342 492 NEEFKALVLEYMPH-GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD-DNMVAHLSDF 569 (596)
Q Consensus 492 ~~~~~~lV~e~~~~-g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~-~~~~~kl~df 569 (596)
.++..++||||+.+ ++|.+++.... .+++..+..++.|+++|+.||| ..+|+||||||+||+++ +++.+||+||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Df 194 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDF 194 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeC
Confidence 99999999999976 89999998754 5789999999999999999999 89999999999999999 7899999999
Q ss_pred ccccccCCCCCccccccccccccccCC
Q 036342 570 SIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 570 Gla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+++..... ......||+.|+||
T Consensus 195 g~~~~~~~~----~~~~~~gt~~y~aP 217 (320)
T 3a99_A 195 GSGALLKDT----VYTDFDGTRVYSPP 217 (320)
T ss_dssp TTCEECCSS----CBCCCCSCGGGSCH
T ss_pred ccccccccc----cccCCCCCccCCCh
Confidence 999876432 12345799999998
No 343
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.84 E-value=1.4e-21 Score=199.35 Aligned_cols=146 Identities=24% Similarity=0.355 Sum_probs=108.2
Q ss_pred cccccccc-cccCCCceeehhhH----------------HhHHHH-HHHHhhcCCCccceeeeeecc----CCeeEEEEe
Q 036342 444 TDEFSENN-LIGRGGFALFIRAF----------------KSFDVE-CEMMKSIRHRNLIKVISSCSN----EEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~~-~ig~G~~g~v~~~~----------------~~~~~e-~~~l~~l~H~niv~l~~~~~~----~~~~~lV~e 501 (596)
.++|...+ .||+|+||.||+|. ....+| ...++.++||||+++++++.. +...++|||
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 56888854 69999999999863 122333 344677899999999999875 445899999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEeccccccccCC
Q 036342 502 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~dfGla~~~~~ 577 (596)
|+++|+|.+++.... ..+++.++..++.|++.|+.||| ..+|+||||||+||+++. ++.+||+|||+++....
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999999998764 36899999999999999999999 889999999999999976 45699999999986542
Q ss_pred CCCccccccccccccccCC
Q 036342 578 EDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 578 ~~~~~~~~~~~gt~~y~aP 596 (596)
. .....+||+.|+||
T Consensus 184 ~----~~~~~~~t~~y~aP 198 (336)
T 3fhr_A 184 N----ALQTPCYTPYYVAP 198 (336)
T ss_dssp -------------------
T ss_pred c----ccccCCCCcCccCh
Confidence 2 12345789999998
No 344
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=8.5e-21 Score=189.40 Aligned_cols=190 Identities=22% Similarity=0.288 Sum_probs=99.0
Q ss_pred CccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCC
Q 036342 60 NLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLT 139 (596)
Q Consensus 60 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~ 139 (596)
++..+.+..+.++...+ +..+++|++|++++|.++.+ + .+..+++|++|++++|+++++.+ +.++++|+
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~-------l~~l~~L~ 93 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-------LANLKNLG 93 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-------GTTCTTCC
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc-------cccCCCCC
Confidence 34445555555553322 33456666666666666644 2 35566666666666666655321 45555555
Q ss_pred EEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccC
Q 036342 140 LIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLED 219 (596)
Q Consensus 140 ~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 219 (596)
.|++++|.+++. +.+..+++|++|++++|.+++. ..+..+++|++|++++
T Consensus 94 ~L~l~~n~l~~~----------------------------~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~ 143 (291)
T 1h6t_A 94 WLFLDENKVKDL----------------------------SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGN 143 (291)
T ss_dssp EEECCSSCCCCG----------------------------GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCS
T ss_pred EEECCCCcCCCC----------------------------hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccC
Confidence 555555555432 1244445555555555555432 2344555555555555
Q ss_pred CcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCC
Q 036342 220 NILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 220 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~ 295 (596)
|.+++. ..+..+++|+.|++++|++++..+ +..+++|+.|+|++|.++.+|. +..+++|+.|++++|+++.
T Consensus 144 n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~~-l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 144 NKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA-LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCGG-GTTCTTCSEEEEEEEEEEC
T ss_pred CcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCChh-hccCCCCCEEECcCCcccC
Confidence 555532 345555555555555555554333 5555555555555555555542 4445555555555555443
No 345
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.84 E-value=1.6e-21 Score=198.19 Aligned_cols=146 Identities=25% Similarity=0.364 Sum_probs=110.0
Q ss_pred cccccccccccCCCceeehhhH----------------------HhHHHHHH-HHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 444 TDEFSENNLIGRGGFALFIRAF----------------------KSFDVECE-MMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~----------------------~~~~~e~~-~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
.++|...+.||+|+||.||+|. ..+..|+. +++.++||||+++++++..++..|+||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 4689999999999999999852 23445555 778889999999999999999999999
Q ss_pred ecCCCCCHHHHHhh----CCCCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCCcEEEecccccccc
Q 036342 501 EYMPHGSLEKYLYS----SNCILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 501 e~~~~g~L~~~l~~----~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~ 575 (596)
||+++ +|.+++.. ....+++..+..++.|++.|+.||| .. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99975 88777763 2346889999999999999999999 77 9999999999999999999999999999876
Q ss_pred CCCCCccccccccccccccCC
Q 036342 576 TGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 576 ~~~~~~~~~~~~~gt~~y~aP 596 (596)
.... ......||+.|+||
T Consensus 177 ~~~~---~~~~~~gt~~y~aP 194 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAP 194 (327)
T ss_dssp ---------------------
T ss_pred cccc---ccccCCCCccccCc
Confidence 4321 22334799999998
No 346
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.1e-20 Score=194.66 Aligned_cols=175 Identities=24% Similarity=0.245 Sum_probs=126.0
Q ss_pred CEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhcc-CCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 139 TLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEIS-NLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 139 ~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
+.+++++|.++.+ |. .++..++.|+|++|+|+++.+..|. ++++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 21 ~~l~c~~~~l~~i-P~----~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~L 95 (361)
T 2xot_A 21 NILSCSKQQLPNV-PQ----SLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDL 95 (361)
T ss_dssp TEEECCSSCCSSC-CS----SCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEEeCCCCcCcc-Cc----cCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEEC
Confidence 4566666666543 32 1234577777777777777777776 7788888888888888777777888888888888
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCccc----ccccccceEEcccCCC
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTF----WNLKDILQLNFSSNFL 293 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~----~~l~~L~~L~ls~N~l 293 (596)
++|.|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+|... ..+++|+.|+|++|+|
T Consensus 96 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l 175 (361)
T 2xot_A 96 SSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKL 175 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCC
T ss_pred CCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCC
Confidence 888887666667777888888888888888777778888888888888888888877654 3466777777777777
Q ss_pred CCchhhhhccccc--cceEecCCCcCc
Q 036342 294 TGPLLLEIGNLKV--LIGIDFSMNNFS 318 (596)
Q Consensus 294 ~~~~~~~~~~l~~--L~~L~ls~N~~~ 318 (596)
++..+..+..++. ++.|++++|.+.
T Consensus 176 ~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 176 KKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CccCHHHhhhccHhhcceEEecCCCcc
Confidence 7666566666655 355666666664
No 347
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.84 E-value=2.4e-21 Score=198.94 Aligned_cols=144 Identities=19% Similarity=0.343 Sum_probs=123.8
Q ss_pred cccccccccccCCCceeehhhH---------------------HhHHHHHHHHhhcCCCc------cceeeeeeccCCee
Q 036342 444 TDEFSENNLIGRGGFALFIRAF---------------------KSFDVECEMMKSIRHRN------LIKVISSCSNEEFK 496 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~---------------------~~~~~e~~~l~~l~H~n------iv~l~~~~~~~~~~ 496 (596)
.++|+..+.||+|+||.||+|. +.+.+|+.++++++|++ ++.+++++...+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 3689999999999999999752 34678999999998776 99999999999999
Q ss_pred EEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee-----------------
Q 036342 497 ALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL----------------- 558 (596)
Q Consensus 497 ~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl----------------- 558 (596)
|+||||+ +|++.+++.... ..+++.++..++.|++.||.||| ..+|+||||||+||++
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccc
Confidence 9999999 667877776654 46899999999999999999999 8999999999999999
Q ss_pred --CCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 559 --DDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 559 --~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
+.++.+||+|||+++..... .....||+.|+||
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aP 208 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPP 208 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCH
T ss_pred cccCCCcEEEeecCcccccccc-----ccCCcCCCcccCC
Confidence 56789999999999864322 2345799999998
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=9.8e-21 Score=188.96 Aligned_cols=166 Identities=28% Similarity=0.372 Sum_probs=87.2
Q ss_pred CCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecC
Q 036342 36 LKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115 (596)
Q Consensus 36 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 115 (596)
+..+++..+.+++ +.... .+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|++|+++
T Consensus 26 ~~~~~l~~~~~~~-~~~~~--~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~ 98 (291)
T 1h6t_A 26 TIKDNLKKKSVTD-AVTQN--ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLD 98 (291)
T ss_dssp HHHHHTTCSCTTS-EECHH--HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECC
T ss_pred HHHHHhcCCCccc-ccchh--hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECC
Confidence 3344455555542 22222 256666777777666632 3 36666677777777777765544 6677777777777
Q ss_pred CCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC
Q 036342 116 ENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG 195 (596)
Q Consensus 116 ~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 195 (596)
+|.++.++ .+..+++|+.|++++|++++. + .+..+ ++|++|++++|++++. ..+..+++|+.|++++
T Consensus 99 ~n~l~~~~-------~l~~l~~L~~L~L~~n~i~~~-~--~l~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~ 165 (291)
T 1h6t_A 99 ENKVKDLS-------SLKDLKKLKSLSLEHNGISDI-N--GLVHL-PQLESLYLGNNKITDI--TVLSRLTKLDTLSLED 165 (291)
T ss_dssp SSCCCCGG-------GGTTCTTCCEEECTTSCCCCC-G--GGGGC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCS
T ss_pred CCcCCCCh-------hhccCCCCCEEECCCCcCCCC-h--hhcCC-CCCCEEEccCCcCCcc--hhhccCCCCCEEEccC
Confidence 77666532 256666777777777766543 1 23333 3344444444444433 2344444444444444
Q ss_pred CcccCCCCccccCCCCCCeEEccCCccc
Q 036342 196 NKLNGSIPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 196 N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
|.+++..| +..+++|+.|++++|.++
T Consensus 166 N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 166 NQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp SCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred Cccccchh--hcCCCccCEEECCCCcCC
Confidence 44443322 444444444444444444
No 349
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.84 E-value=1.4e-21 Score=206.44 Aligned_cols=147 Identities=25% Similarity=0.393 Sum_probs=111.7
Q ss_pred cccccccccCCCceeehhh-----------------HHhHHHHHHHHhhc-CCCccceeeeeeccCCeeEEEEecCCCCC
Q 036342 446 EFSENNLIGRGGFALFIRA-----------------FKSFDVECEMMKSI-RHRNLIKVISSCSNEEFKALVLEYMPHGS 507 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~-----------------~~~~~~e~~~l~~l-~H~niv~l~~~~~~~~~~~lV~e~~~~g~ 507 (596)
.|...+.||+|+||+||.+ .+.+.+|+.+++++ +|||||++++++..++..|+|||||+ |+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gs 94 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LN 94 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EE
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CC
Confidence 3455688999999999642 13567899999886 89999999999999999999999995 69
Q ss_pred HHHHHhhCCCC------CCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCC-------------CcEEEec
Q 036342 508 LEKYLYSSNCI------LDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDN-------------MVAHLSD 568 (596)
Q Consensus 508 L~~~l~~~~~~------l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~-------------~~~kl~d 568 (596)
|.+++...... ..+..++.++.|++.|++||| +.+|+||||||+|||++.+ +.+||+|
T Consensus 95 L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~D 171 (434)
T 2rio_A 95 LQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISD 171 (434)
T ss_dssp HHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECC
T ss_pred HHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEcc
Confidence 99999865421 123345779999999999999 8899999999999999654 4899999
Q ss_pred cccccccCCCCCcc--ccccccccccccCC
Q 036342 569 FSIAKLLTGEDQSM--TQTQTLGTIGYMAP 596 (596)
Q Consensus 569 fGla~~~~~~~~~~--~~~~~~gt~~y~aP 596 (596)
||+++.+....... .....+||++|+||
T Consensus 172 FG~a~~~~~~~~~~~~~~~~~~gt~~y~aP 201 (434)
T 2rio_A 172 FGLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201 (434)
T ss_dssp CTTCEECCC--------------CCTTSCH
T ss_pred cccceecCCCCccceeeecCCCCCCCccCH
Confidence 99999765432211 12345799999998
No 350
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.83 E-value=2.7e-21 Score=195.49 Aligned_cols=147 Identities=22% Similarity=0.285 Sum_probs=109.4
Q ss_pred hcccccccccccCCCceeehhhH-----------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEE
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-----------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALV 499 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-----------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV 499 (596)
..++|+..+.||+|+||.||+|. +.+..+..+++.++||||+++++++..++..|+|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv 102 (318)
T 2dyl_A 23 EINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIA 102 (318)
T ss_dssp CGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEE
Confidence 35689999999999999999852 1233445578888999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeCCCCcEEEeccccccccCCC
Q 036342 500 LEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGE 578 (596)
Q Consensus 500 ~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~ 578 (596)
|||+ ++.+..........+++..+..++.|+++|+.||| .. +++||||||+||+++.++.+||+|||+++.....
T Consensus 103 ~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 103 MELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp ECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred Eecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 9999 55666666554557899999999999999999999 74 8999999999999999999999999999865432
Q ss_pred CCccccccccccccccCC
Q 036342 579 DQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 579 ~~~~~~~~~~gt~~y~aP 596 (596)
. ......||+.|+||
T Consensus 179 ~---~~~~~~~~~~y~aP 193 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAP 193 (318)
T ss_dssp -----------CCTTCCH
T ss_pred c---cccccCCCccccCh
Confidence 1 22345789999998
No 351
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.83 E-value=5.1e-21 Score=198.91 Aligned_cols=149 Identities=23% Similarity=0.368 Sum_probs=124.6
Q ss_pred HHhcccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcC-CC-----ccceeeeeeccCC
Q 036342 441 CRATDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIR-HR-----NLIKVISSCSNEE 494 (596)
Q Consensus 441 ~~~~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~-H~-----niv~l~~~~~~~~ 494 (596)
....++|+..+.||+|+||.||+|. +.+..|+.+++.++ |+ +|+++++++..++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3446789999999999999999862 34567888888875 44 4999999999999
Q ss_pred eeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeC--CCCcEEEecccc
Q 036342 495 FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLD--DNMVAHLSDFSI 571 (596)
Q Consensus 495 ~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~--~~~~~kl~dfGl 571 (596)
..|+||||++ |+|.+++.... ..+++..+..++.|++.|+.|||. +..+|+||||||+|||++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 59999998764 458999999999999999999992 246899999999999994 578899999999
Q ss_pred ccccCCCCCccccccccccccccCC
Q 036342 572 AKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 572 a~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
++..... .....||+.|+||
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aP 227 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSP 227 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCH
T ss_pred ceecccc-----cccccCCccccCh
Confidence 9876422 2346799999998
No 352
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.4e-20 Score=205.68 Aligned_cols=169 Identities=30% Similarity=0.404 Sum_probs=87.2
Q ss_pred CCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCC
Q 036342 58 LPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKS 137 (596)
Q Consensus 58 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~ 137 (596)
+++|+.|++++|.+.. ++ .+..+++|+.|+|++|+|+++.+ |..+++|+.|+|++|.++.++ .+..+++
T Consensus 42 L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~ 110 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDLS-------SLKDLKK 110 (605)
T ss_dssp HTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCT-------TSTTCTT
T ss_pred CCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCCh-------hhccCCC
Confidence 4555555555555542 22 35555555555555555554443 555555555555555555432 2455555
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
|+.|+|++|.++++ + .+..+ ++|+.|+|++|.|++. ..|..+++|+.|+|++|.+.+..| +..+++|+.|+|
T Consensus 111 L~~L~Ls~N~l~~l-~--~l~~l-~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 182 (605)
T 1m9s_A 111 LKSLSLEHNGISDI-N--GLVHL-PQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 182 (605)
T ss_dssp CCEEECTTSCCCCC-G--GGGGC-TTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCEEEecCCCCCCC-c--cccCC-CccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEEC
Confidence 55555555555542 1 23333 3455555555555443 345555555555555555554443 455555555555
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
++|.|++ + +.+..+++|+.|+|++|++.
T Consensus 183 s~N~i~~-l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 183 SKNHISD-L-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp CSSCCCB-C-GGGTTCTTCSEEECCSEEEE
T ss_pred cCCCCCC-C-hHHccCCCCCEEEccCCcCc
Confidence 5555553 2 23455555555555555554
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.83 E-value=7.4e-21 Score=181.65 Aligned_cols=154 Identities=19% Similarity=0.214 Sum_probs=77.9
Q ss_pred cEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCC
Q 036342 165 EEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSN 244 (596)
Q Consensus 165 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N 244 (596)
+.+++++++++.+ |..+. ++|+.|++++|.++++.+..|..+++|++|+|++|.|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 4455555555532 32222 34555555555555444445555555555555555555444444555555555555555
Q ss_pred cCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChh
Q 036342 245 KLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPRE 324 (596)
Q Consensus 245 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~ 324 (596)
+|+...+..|.++ ++|++|+|++|++++..+..|..+++|+.|+|++|++++. +..
T Consensus 91 ~l~~l~~~~f~~l-----------------------~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~ 146 (220)
T 2v9t_B 91 KITELPKSLFEGL-----------------------FSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTI-AKG 146 (220)
T ss_dssp CCCCCCTTTTTTC-----------------------TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC-CTT
T ss_pred cCCccCHhHccCC-----------------------CCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEE-CHH
Confidence 5544444444444 4555555555555544455555555555555555555533 322
Q ss_pred hhccCCCCCeEECCCCccccc
Q 036342 325 IGEKLSYLEDLNLSFNKLKGE 345 (596)
Q Consensus 325 ~~~~l~~L~~L~l~~N~l~~~ 345 (596)
.+..+++|+.|+|++|++.+.
T Consensus 147 ~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 147 TFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp TTTTCTTCCEEECCSSCEECS
T ss_pred HHhCCCCCCEEEeCCCCcCCC
Confidence 444555666666666665543
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.8e-20 Score=204.82 Aligned_cols=191 Identities=25% Similarity=0.365 Sum_probs=147.1
Q ss_pred CCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEc
Q 036342 11 NLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSL 90 (596)
Q Consensus 11 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 90 (596)
.+..+.++.+.+.+..+ +..+.+|+.|+|++|.++ .++.+. .+++|+.|+|++|.+++..| +..+++|+.|+|
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~l~--~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~L 94 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQGIQ--YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFL 94 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTTGG--GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChHHc--cCCCCCEEEeeCCCCCCChh--hccCCCCCEEEC
Confidence 34445667777765544 456778888888888886 455544 38888888888888886544 788888888888
Q ss_pred cCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEcc
Q 036342 91 GMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMY 170 (596)
Q Consensus 91 ~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~ 170 (596)
++|.|+++ +.|..+++|++|+|++|.++.++ .+..+++|+.|+|++|.+++. ..+..+ ++|+.|+|+
T Consensus 95 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l~-------~l~~l~~L~~L~Ls~N~l~~l---~~l~~l-~~L~~L~Ls 161 (605)
T 1m9s_A 95 DENKIKDL--SSLKDLKKLKSLSLEHNGISDIN-------GLVHLPQLESLYLGNNKITDI---TVLSRL-TKLDTLSLE 161 (605)
T ss_dssp CSSCCCCC--TTSTTCTTCCEEECTTSCCCCCG-------GGGGCTTCSEEECCSSCCCCC---GGGGSC-TTCSEEECC
T ss_pred cCCCCCCC--hhhccCCCCCEEEecCCCCCCCc-------cccCCCccCEEECCCCccCCc---hhhccc-CCCCEEECc
Confidence 88888763 36888888888888888887642 367788888888888888875 256666 678888888
Q ss_pred ccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCccccc
Q 036342 171 NCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225 (596)
Q Consensus 171 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 225 (596)
+|.|++..| +..+++|+.|+|++|.+++. ..+..+++|+.|+|++|++.+.
T Consensus 162 ~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 162 DNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 888887766 88888999999999988864 3578888999999999988753
No 355
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=2.4e-20 Score=192.20 Aligned_cols=176 Identities=23% Similarity=0.197 Sum_probs=93.1
Q ss_pred CEEEccCCcCccccCccCccCCCCccEEEccCCccccccCcccc-CCCCCCEEEccCCcccccCCccccCCCCCCEEecC
Q 036342 37 KFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF-NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115 (596)
Q Consensus 37 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 115 (596)
+.+++++|.|+ .+|... ...++.|+|++|+|++..+..|. ++++|++|+|++|+|+++.+++|.++++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 45666666665 333311 23466666666666655555555 66666666666666666666666666666666666
Q ss_pred CCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC
Q 036342 116 ENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG 195 (596)
Q Consensus 116 ~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 195 (596)
+|+|+.+++. .|.++++|+.|+|++|+|++ +.|..|.++++|+.|+|++
T Consensus 97 ~N~l~~~~~~-----~~~~l~~L~~L~L~~N~i~~--------------------------~~~~~~~~l~~L~~L~L~~ 145 (361)
T 2xot_A 97 SNHLHTLDEF-----LFSDLQALEVLLLYNNHIVV--------------------------VDRNAFEDMAQLQKLYLSQ 145 (361)
T ss_dssp SSCCCEECTT-----TTTTCTTCCEEECCSSCCCE--------------------------ECTTTTTTCTTCCEEECCS
T ss_pred CCcCCcCCHH-----HhCCCcCCCEEECCCCcccE--------------------------ECHHHhCCcccCCEEECCC
Confidence 6666554332 24455555555555555443 3334444445555555555
Q ss_pred CcccCCCCccc---cCCCCCCeEEccCCcccccCccchhcCCC--CcEEEccCCcCc
Q 036342 196 NKLNGSIPITL---GKLRKLQRLNLEDNILEGSIPDDICRLAE--LYRLELGSNKLY 247 (596)
Q Consensus 196 N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~~~~~~~~~l~~--L~~L~Ls~N~l~ 247 (596)
|.+++..+..| ..+++|+.|+|++|.|++..+..+..++. ++.|+|++|.+.
T Consensus 146 N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 146 NQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 55554333333 33555555555555555333344444444 255556555554
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=1e-20 Score=180.67 Aligned_cols=153 Identities=23% Similarity=0.258 Sum_probs=95.3
Q ss_pred ccEEEccccccccccChhccCCCCCCEEEccCCcccCCCC-ccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 164 LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIP-ITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 164 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
-+.+++++|.++. +|..+. ..+++|++++|.+++..+ ..|..+++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 4567777777764 344332 345677777777776543 346667777777777777776555566667777777777
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcc
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSG 319 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~ 319 (596)
+|++++..+..|.++++|++|+|++|+++++ |..+..+++|++|+|++|++++..|..|..+++|+.|++++|.+++
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 7777666666666666666666666666664 3445555666666666666655555555555555555555555543
No 357
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.83 E-value=3.2e-21 Score=199.67 Aligned_cols=144 Identities=19% Similarity=0.322 Sum_probs=122.5
Q ss_pred cccccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcC-----------CCccceeeeeecc
Q 036342 444 TDEFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIR-----------HRNLIKVISSCSN 492 (596)
Q Consensus 444 ~~~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~-----------H~niv~l~~~~~~ 492 (596)
.++|...+.||+|+||.||+|. +.+.+|+.++++++ ||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 3579999999999999999863 34678999999886 8999999999976
Q ss_pred CC----eeEEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCC-ceEeCCCCCCCeeeC------C
Q 036342 493 EE----FKALVLEYMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSA-LVIHCDLKPSNVLLD------D 560 (596)
Q Consensus 493 ~~----~~~lV~e~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~-~i~Hrdlk~~NILl~------~ 560 (596)
.+ ..++||||+ +++|.+++.... ..+++..+..++.|++.|++||| .. +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 54 789999999 899999998743 45889999999999999999999 87 999999999999994 4
Q ss_pred CCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 561 NMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 561 ~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
.+.+||+|||+++..... .....||+.|+||
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP 204 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSP 204 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCH
T ss_pred cceEEEcccccccccCCC-----CCCCCCCccccCc
Confidence 458999999999875422 2335789999998
No 358
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.82 E-value=1.3e-20 Score=188.88 Aligned_cols=131 Identities=24% Similarity=0.419 Sum_probs=115.1
Q ss_pred ccccccc-ccccCCCceeehhhH----------------HhHHHHHHHH-hhcCCCccceeeeeecc----CCeeEEEEe
Q 036342 444 TDEFSEN-NLIGRGGFALFIRAF----------------KSFDVECEMM-KSIRHRNLIKVISSCSN----EEFKALVLE 501 (596)
Q Consensus 444 ~~~~~~~-~~ig~G~~g~v~~~~----------------~~~~~e~~~l-~~l~H~niv~l~~~~~~----~~~~~lV~e 501 (596)
.++|... +.||+|+||.||++. ..+.+|+.++ +..+||||+++++++.. +...|+|||
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 95 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 95 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence 3567776 789999999999863 4577899888 66799999999999876 667899999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC---CCcEEEeccccccccCC
Q 036342 502 YMPHGSLEKYLYSSN-CILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD---NMVAHLSDFSIAKLLTG 577 (596)
Q Consensus 502 ~~~~g~L~~~l~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~---~~~~kl~dfGla~~~~~ 577 (596)
|+++|+|.+++.... ..+++..+..++.|++.|+.||| ..+|+||||||+||+++. ++.+||+|||+++....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 172 (299)
T 3m2w_A 96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172 (299)
T ss_dssp CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence 999999999998754 36899999999999999999999 899999999999999998 78999999999987643
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1.2e-19 Score=173.34 Aligned_cols=132 Identities=24% Similarity=0.243 Sum_probs=73.9
Q ss_pred ccEEEccccccccccC-hhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 164 LEEFYMYNCNISGGIP-EEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 164 L~~L~l~~n~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
+++|+|++|+|++..+ ..|..+++|++|+|++|.+++..+.+|.++++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 34 ~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 113 (220)
T 2v70_A 34 TAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLR 113 (220)
T ss_dssp CSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECT
T ss_pred CCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECC
Confidence 4455555555544432 334555555555555555555555555555555555555555554444455555555666666
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcccCC-CcccccccccceEEcccCCCCC
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSI-PLTFWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~ls~N~l~~ 295 (596)
+|++++..|..|..+++|+.|+|++|+++++ |..+..+++|+.|++++|+++.
T Consensus 114 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 114 SNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 6655555555555566666666666666554 4455556666666666666553
No 360
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.82 E-value=1.4e-20 Score=187.28 Aligned_cols=123 Identities=17% Similarity=0.086 Sum_probs=111.2
Q ss_pred ccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCCCccceeeeeeccCCeeEEEE
Q 036342 445 DEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRHRNLIKVISSCSNEEFKALVL 500 (596)
Q Consensus 445 ~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H~niv~l~~~~~~~~~~~lV~ 500 (596)
++|+..+.||+|+||.||+|. +.+.+|+.++++++||||+++++++..++..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 579999999999999999852 45789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEecccccc
Q 036342 501 EYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573 (596)
Q Consensus 501 e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~ 573 (596)
||+++++|.++++.. ....++..++.|++.|+.||| ..+|+||||||+||++++++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999999653 355678889999999999999 8999999999999999999999999877543
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.82 E-value=1.6e-19 Score=173.54 Aligned_cols=155 Identities=25% Similarity=0.196 Sum_probs=104.8
Q ss_pred cccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
+.+.++.+++.++.+ |..+. ++|++|+|++|.+++..|..|..+++|++|+|++|.|++..+..|..+++|++|+|+
T Consensus 20 s~~~v~c~~~~l~~i-p~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 20 SGTTVDCRSKRHASV-PAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp ETTEEECTTSCCSSC-CSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred eCCEeEccCCCcCcc-CCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 455566666666533 33222 667777777777777667777777777777777777765444556677777777777
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCccc
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~ 320 (596)
+|++++..+..|..+++|+.|+|++|+|+.+|..+..+++|+.|++++|++++..+..+..+++|+.|++++|.+...
T Consensus 97 ~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred CCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 777776666667777777777777777777777777777777777777777665555566666666666666666543
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=5.4e-23 Score=223.51 Aligned_cols=138 Identities=20% Similarity=0.192 Sum_probs=91.3
Q ss_pred ccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccC
Q 036342 164 LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243 (596)
Q Consensus 164 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 243 (596)
|..+.+++|.|+...+ ..|+.|+|++|.+++ +|. |..+++|+.|+|++|.|+ .+|..+..+++|+.|+|++
T Consensus 425 L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 495 (567)
T 1dce_A 425 LRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASD 495 (567)
T ss_dssp HHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCS
T ss_pred hhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCC
Confidence 4444555555554322 136777777777775 344 777777777777777777 6677777777777777777
Q ss_pred CcCcccchhhhccCCCCcEEEeCCCcccCC--CcccccccccceEEcccCCCCCchhh---hhccccccceEec
Q 036342 244 NKLYGSIPACFGNLASLRILSLGSNKLTSI--PLTFWNLKDILQLNFSSNFLTGPLLL---EIGNLKVLIGIDF 312 (596)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~i--p~~~~~l~~L~~L~ls~N~l~~~~~~---~~~~l~~L~~L~l 312 (596)
|+|++ +| .++.+++|+.|+|++|+|+++ |..+..+++|+.|+|++|++++..+. .+..+++|+.||+
T Consensus 496 N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 496 NALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 77775 45 677777777777777777776 66777777777777777777765432 2334667777654
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=2.1e-19 Score=171.60 Aligned_cols=152 Identities=24% Similarity=0.269 Sum_probs=95.5
Q ss_pred CEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 37 KFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 37 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
+.+++++|.++ .+|... .++|+.|+|++|+|++..+..|.++++|++|+|++|+|+++.|++|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l---~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNL---PETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSC---CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCcc---CcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 46777777776 344321 24677777777777766666677777777777777777766666676666666666666
Q ss_pred CcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCC
Q 036342 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGN 196 (596)
Q Consensus 117 N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 196 (596)
|.|+.+++. .|.++++|+.|+|++|+| ++..|..|..+++|++|+|++|
T Consensus 90 N~l~~l~~~-----~f~~l~~L~~L~L~~N~l--------------------------~~~~~~~~~~l~~L~~L~L~~N 138 (220)
T 2v9t_B 90 NKITELPKS-----LFEGLFSLQLLLLNANKI--------------------------NCLRVDAFQDLHNLNLLSLYDN 138 (220)
T ss_dssp SCCCCCCTT-----TTTTCTTCCEEECCSSCC--------------------------CCCCTTTTTTCTTCCEEECCSS
T ss_pred CcCCccCHh-----HccCCCCCCEEECCCCCC--------------------------CEeCHHHcCCCCCCCEEECCCC
Confidence 666655433 244444444444444444 3344455666666777777777
Q ss_pred cccCCCCccccCCCCCCeEEccCCccc
Q 036342 197 KLNGSIPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 197 ~l~~~~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
.+++..+..|..+++|++|+|++|.+.
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 139 KLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred cCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 776666666666666666666666665
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.80 E-value=3e-20 Score=182.51 Aligned_cols=170 Identities=22% Similarity=0.299 Sum_probs=100.2
Q ss_pred CCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEE
Q 036342 33 VSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQL 112 (596)
Q Consensus 33 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 112 (596)
+.++..+++++|.+++ ++.. ..+++|++|++++|.++ .++ .+..+++|++|+|++|+|+++.+ |.++++|++|
T Consensus 18 l~~l~~l~l~~~~i~~-~~~~--~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTD-LVSQ--KELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTTS-EECH--HHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCccc-ccch--hhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3445555555555542 2222 22556666666666655 233 45556666666666666655443 5666666666
Q ss_pred ecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEE
Q 036342 113 GLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEID 192 (596)
Q Consensus 113 ~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 192 (596)
++++|+++.+++ +.. ++|+.|++++|++++. + .+..+ ++|++|++++|+|++. +.+..+++|++|+
T Consensus 91 ~L~~N~l~~l~~-------~~~-~~L~~L~L~~N~l~~~-~--~l~~l-~~L~~L~Ls~N~i~~~--~~l~~l~~L~~L~ 156 (263)
T 1xeu_A 91 SVNRNRLKNLNG-------IPS-ACLSRLFLDNNELRDT-D--SLIHL-KNLEILSIRNNKLKSI--VMLGFLSKLEVLD 156 (263)
T ss_dssp ECCSSCCSCCTT-------CCC-SSCCEEECCSSCCSBS-G--GGTTC-TTCCEEECTTSCCCBC--GGGGGCTTCCEEE
T ss_pred ECCCCccCCcCc-------ccc-CcccEEEccCCccCCC-h--hhcCc-ccccEEECCCCcCCCC--hHHccCCCCCEEE
Confidence 666666655432 122 5666666666666653 1 34444 5566666666666654 2566677777777
Q ss_pred ccCCcccCCCCccccCCCCCCeEEccCCccccc
Q 036342 193 LGGNKLNGSIPITLGKLRKLQRLNLEDNILEGS 225 (596)
Q Consensus 193 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 225 (596)
+++|.+++. ..+..+++|+.|++++|.+++.
T Consensus 157 L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 157 LHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp CTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 777777765 5566777777777777777643
No 365
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=1.2e-18 Score=167.34 Aligned_cols=153 Identities=23% Similarity=0.256 Sum_probs=82.1
Q ss_pred CCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecC
Q 036342 36 LKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115 (596)
Q Consensus 36 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 115 (596)
.+.++.+++.++ .+|... .++|++|+|++|+|++..|..|.++++|++|+|++|+|+.+.+..|.++++|++|+|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~---~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 96 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGI---PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLG 96 (229)
T ss_dssp TTEEECTTSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcC-ccCCCC---CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECC
Confidence 445666666665 333311 2456666666666665555555556666666666666655555555555555555555
Q ss_pred CCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccC
Q 036342 116 ENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGG 195 (596)
Q Consensus 116 ~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 195 (596)
+|+++.+++. .|..+++|+.|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 97 ~N~l~~l~~~-----~~~~l~~L~~L~Ls~N~l~---------------------------~lp~~~~~l~~L~~L~L~~ 144 (229)
T 3e6j_A 97 TNQLTVLPSA-----VFDRLVHLKELFMCCNKLT---------------------------ELPRGIERLTHLTHLALDQ 144 (229)
T ss_dssp SSCCCCCCTT-----TTTTCTTCCEEECCSSCCC---------------------------SCCTTGGGCTTCSEEECCS
T ss_pred CCcCCccChh-----HhCcchhhCeEeccCCccc---------------------------ccCcccccCCCCCEEECCC
Confidence 5555544332 2344444444444444443 2234445555666666666
Q ss_pred CcccCCCCccccCCCCCCeEEccCCcccc
Q 036342 196 NKLNGSIPITLGKLRKLQRLNLEDNILEG 224 (596)
Q Consensus 196 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 224 (596)
|++++..+..|..+++|+.|++++|.+..
T Consensus 145 N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 145 NQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 66665555555566666666666665553
No 366
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.79 E-value=6.8e-19 Score=165.00 Aligned_cols=149 Identities=17% Similarity=0.191 Sum_probs=82.6
Q ss_pred ccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEc
Q 036342 162 RSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLEL 241 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (596)
++|++|++++|.|+. +| .+..+++|++|++++|.+.. +..+..+++|++|++++|.+++..+..+..+++|++|++
T Consensus 44 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 345555555555552 23 45556666666666665442 234556666666666666666555556666666666666
Q ss_pred cCCcCcccchhhhccCCCCcEEEeCCCc-ccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcC
Q 036342 242 GSNKLYGSIPACFGNLASLRILSLGSNK-LTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNF 317 (596)
Q Consensus 242 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~ 317 (596)
++|++++..|..+..+++|++|+|++|. ++.+| .+..+++|+.|++++|.+++.. .+..+++|+.|++++|++
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCCT--TGGGCSSCCEEEECBC--
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcChH--HhccCCCCCEEEeeCccc
Confidence 6666665556666666666666666665 55554 4455555555555555554422 344444444444444444
No 367
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.79 E-value=2.7e-19 Score=181.94 Aligned_cols=287 Identities=16% Similarity=0.100 Sum_probs=158.0
Q ss_pred CCCCCEEECCCCCCccccchhhhC-CCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccC------
Q 036342 9 LQNLEELQLGQNKLIGTVPAAIFN-VSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFN------ 81 (596)
Q Consensus 9 l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~------ 81 (596)
+.++++|+++++ +....-..+.. +++|++|||++|+++...... ..++.++.+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~--~~~~~~~~~~~~~~~---I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKA--GTYPNGKFYIYMANF---VPAYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESS--SSSGGGCCEEECTTE---ECTTTTEEEETTEE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcc--ccccccccccccccc---cCHHHhcccccccc
Confidence 567889999864 22222233444 788999999999987111111 113345666666663 34556666
Q ss_pred --CCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCC----CccCCch
Q 036342 82 --ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPL----DGILPKT 155 (596)
Q Consensus 82 --l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l----~~~~~~~ 155 (596)
+++|++|+|.+ .++.+.+.+|.++++|+.|+++.|.++.+.+. +|.++.++..+.++.+.. ..+ ...
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~-----aF~~~~~l~~l~~~~~~~~~~~~~i-~~~ 170 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPE-----ALADSVTAIFIPLGSSDAYRFKNRW-EHF 170 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTT-----SSCTTTCEEEECTTCTHHHHTSTTT-TTS
T ss_pred cccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchh-----hhcCCCceEEecCcchhhhhccccc-ccc
Confidence 88888888888 88888888888888888888888888776654 577777777666655221 111 111
Q ss_pred hhhccccccc-EEEcccccc-ccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcC
Q 036342 156 SISNLSRSLE-EFYMYNCNI-SGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRL 233 (596)
Q Consensus 156 ~~~~l~~~L~-~L~l~~n~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 233 (596)
.|.+. .+|+ .+.+....- .......-....++..+.+.++-...........+++|+.+++++|.++...+..|.++
T Consensus 171 ~f~~~-~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~ 249 (329)
T 3sb4_A 171 AFIEG-EPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQK 249 (329)
T ss_dssp CEEES-CCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTC
T ss_pred ccccc-cccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCC
Confidence 22222 2233 222222110 00000000123344445444432211111111124556666666655554444455556
Q ss_pred CCCcEEEccCCcCcccchhhhccCCCCc-EEEeCCCcccCCC-cccccccccceEEcccCCCCCchhhhhccccccceEe
Q 036342 234 AELYRLELGSNKLYGSIPACFGNLASLR-ILSLGSNKLTSIP-LTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGID 311 (596)
Q Consensus 234 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~ip-~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ 311 (596)
.+|+.++|++| ++.+.+.+|.++++|+ .+++.+ .++.|+ .+|.++++|+.+++++|.++......|.++++|+.++
T Consensus 250 ~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 250 KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66666666555 5545555666666666 666655 555554 3455566666666666666666566666666666654
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=3.1e-19 Score=175.26 Aligned_cols=168 Identities=18% Similarity=0.214 Sum_probs=99.9
Q ss_pred cccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
++..+++++|.+++.. .+..+++|+.|++++|.++. ++ .+..+++|++|++++|.+++. +. +..+++|+.|+|+
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECC
Confidence 3455556666665443 35556666666666666653 23 455666666666666666633 32 6666666666666
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCC
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIP 322 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~ 322 (596)
+|++++. |.. .. ++|+.|+|++|++++++ .+..+++|+.|++++|++++.. .+..+++|+.|++++|++++.
T Consensus 94 ~N~l~~l-~~~-~~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 94 RNRLKNL-NGI-PS-ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp SSCCSCC-TTC-CC-SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCccCCc-Ccc-cc-CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch--
Confidence 6666542 221 22 66666666666666654 3556666666666666666542 466666666677777766644
Q ss_pred hhhhccCCCCCeEECCCCccccc
Q 036342 323 REIGEKLSYLEDLNLSFNKLKGE 345 (596)
Q Consensus 323 ~~~~~~l~~L~~L~l~~N~l~~~ 345 (596)
..+..+++|+.|++++|++.+.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 2345666677777777766644
No 369
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.77 E-value=9.6e-19 Score=163.22 Aligned_cols=177 Identities=21% Similarity=0.277 Sum_probs=85.3
Q ss_pred cEEEccccccccccChhccCCCCCCEEEccCCcccCCCCc-cccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccC
Q 036342 165 EEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPI-TLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243 (596)
Q Consensus 165 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 243 (596)
+++++++|+++. +|..+. .+|++|++++|.+++..+. .|..+++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 455555555542 233222 2455555555555544432 244555555555555555544444444455555555555
Q ss_pred CcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCCh
Q 036342 244 NKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPR 323 (596)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~ 323 (596)
|+|++..+..|.+ +++|++|+|++|++++..|..+..+++|+.|++++|.+++..+.
T Consensus 88 N~l~~~~~~~~~~-----------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l 144 (192)
T 1w8a_A 88 NKIKEISNKMFLG-----------------------LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHL 144 (192)
T ss_dssp CCCCEECSSSSTT-----------------------CTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCccCHHHhcC-----------------------CCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcc
Confidence 5554444444444 44455555555555544455555555555555555555544332
Q ss_pred hhhccCCCCCeEECCCCcccccCCCCCCCCCCCcccccccccccCCCC
Q 036342 324 EIGEKLSYLEDLNLSFNKLKGEIPRGGSFGNFSAESFEGNELLCGSPN 371 (596)
Q Consensus 324 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~l~~l~~~~N~~~c~~~~ 371 (596)
..+. ..++...+.++...+..|.. +......++..+.+.|..+.
T Consensus 145 ~~~~--~~l~~~~~~~~~~~C~~P~~--l~~~~l~~l~~~~~~C~~~~ 188 (192)
T 1w8a_A 145 AWFA--EWLRKKSLNGGAARCGAPSK--VRDVQIKDLPHSEFKCSSEN 188 (192)
T ss_dssp HHHH--HHHHHHCCSGGGCBBCSSTT--TTTSBGGGSCTTTCCCCCC-
T ss_pred hHHH--HHHHHcCCCCCCCCCCCChH--HcCCChhhCcHhhcCcCCCC
Confidence 2211 11222233344444444432 44455556677777776553
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.8e-19 Score=181.79 Aligned_cols=286 Identities=13% Similarity=0.093 Sum_probs=194.5
Q ss_pred CCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccc--cccCccccCCCCCCEEEccCCcccccCCccccC-----
Q 036342 33 VSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFS--GTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGN----- 105 (596)
Q Consensus 33 l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~----- 105 (596)
+.+++.|.++++--...+..+.. .+++|+.|||++|+|. ...+..+ +.++.+.+..|. +.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i~~~~~~~l~~-~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~---I~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGKLNAEDFRHLRD-EFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANF---VPAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEEECHHHHHHHHH-SCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTE---ECTTTTEEEETTE
T ss_pred hCceeEEEEeccccHHHHHHHHH-hhccCeEEecCcceeEEecCccccc---cccccccccccc---cCHHHhccccccc
Confidence 56789999987632212222211 1788999999999987 3333222 225566666664 45677777
Q ss_pred ---CCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccc----ccccc
Q 036342 106 ---LRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCN----ISGGI 178 (596)
Q Consensus 106 ---l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~----l~~~~ 178 (596)
+++|+.|+|.. .++.+... +|.+|++|+.+++++|.+..+.+. .|... .++..+.+..+. .....
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~-----aF~~~~~L~~l~l~~n~i~~i~~~-aF~~~-~~l~~l~~~~~~~~~~~~~i~ 168 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDA-----AFKGCDNLKICQIRKKTAPNLLPE-ALADS-VTAIFIPLGSSDAYRFKNRWE 168 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTT-----TTTTCTTCCEEEBCCSSCCEECTT-SSCTT-TCEEEECTTCTHHHHTSTTTT
T ss_pred ccccCCCcEEECCc-cccchhHH-----HhhcCcccceEEcCCCCccccchh-hhcCC-CceEEecCcchhhhhcccccc
Confidence 99999999998 88887665 689999999999999988765443 55554 345555554422 22334
Q ss_pred ChhccCCCCCC-EEEccCCcc-cCCCCccccCCCCCCeEEccCCcccccCccchh-cCCCCcEEEccCCcCcccchhhhc
Q 036342 179 PEEISNLTNLV-EIDLGGNKL-NGSIPITLGKLRKLQRLNLEDNILEGSIPDDIC-RLAELYRLELGSNKLYGSIPACFG 255 (596)
Q Consensus 179 ~~~~~~l~~L~-~L~Ls~N~l-~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~ 255 (596)
+.+|.++..|+ .++++...- .......-....++..+.+.++-.. .....+. .+++|+.++|++|+++.+.+.+|.
T Consensus 169 ~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 169 HFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp TSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTT
T ss_pred ccccccccccceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhh
Confidence 45566666666 444443221 1000011113456667777665332 1112222 378999999999999877788899
Q ss_pred cCCCCcEEEeCCCcccCCCc-ccccccccc-eEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCC
Q 036342 256 NLASLRILSLGSNKLTSIPL-TFWNLKDIL-QLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLE 333 (596)
Q Consensus 256 ~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~-~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~ 333 (596)
++++|+.|+|.+| ++.|+. +|.++.+|+ .+++.+ .++.+.+..|.++++|+.++++.|++. .++..+|..+++|+
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~-~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKIT-TLGDELFGNGVPSK 324 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCC-EECTTTTCTTCCCC
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccC-ccchhhhcCCcchh
Confidence 9999999999988 888765 577889998 999988 788788889999999999999999998 56766888888888
Q ss_pred eEEC
Q 036342 334 DLNL 337 (596)
Q Consensus 334 ~L~l 337 (596)
.++.
T Consensus 325 ~ly~ 328 (329)
T 3sb4_A 325 LIYK 328 (329)
T ss_dssp EEEC
T ss_pred hhcc
Confidence 8863
No 371
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=1.9e-18 Score=161.97 Aligned_cols=151 Identities=21% Similarity=0.286 Sum_probs=97.6
Q ss_pred CCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeE
Q 036342 136 KSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRL 215 (596)
Q Consensus 136 ~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 215 (596)
++|+.|++++|.++.. + .+..+ ++|++|++++|.++. +..+..+++|++|++++|.+++..+..+..+++|++|
T Consensus 44 ~~L~~L~l~~n~i~~l-~--~l~~l-~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L 117 (197)
T 4ezg_A 44 NSLTYITLANINVTDL-T--GIEYA-HNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLL 117 (197)
T ss_dssp HTCCEEEEESSCCSCC-T--TGGGC-TTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEE
T ss_pred CCccEEeccCCCccCh-H--HHhcC-CCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEE
Confidence 3444444444444421 1 23333 345555555554432 2356667777777777777776667777777777777
Q ss_pred EccCCcccccCccchhcCCCCcEEEccCCc-CcccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCC
Q 036342 216 NLEDNILEGSIPDDICRLAELYRLELGSNK-LYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 216 ~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~ 294 (596)
++++|.+++..|..+..+++|+.|++++|+ ++ .+| .+..+++|+.|++++|.++.++ .+..+++|+.|++++|++.
T Consensus 118 ~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 118 DISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp ECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC---
T ss_pred EecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcccC
Confidence 777777776667777777778888888777 54 344 5777788888888888887776 6777788888888888775
Q ss_pred C
Q 036342 295 G 295 (596)
Q Consensus 295 ~ 295 (596)
+
T Consensus 195 ~ 195 (197)
T 4ezg_A 195 G 195 (197)
T ss_dssp -
T ss_pred C
Confidence 3
No 372
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.2e-20 Score=205.10 Aligned_cols=181 Identities=18% Similarity=0.190 Sum_probs=84.8
Q ss_pred CCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccc-------------cccccChhccCCCCCCEEE-ccCCcc
Q 036342 133 SNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCN-------------ISGGIPEEISNLTNLVEID-LGGNKL 198 (596)
Q Consensus 133 ~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~-------------l~~~~~~~~~~l~~L~~L~-Ls~N~l 198 (596)
..+++|+.|+|++|+++. +|. .++.+ ++|+.|++++|. +.+..|..+..+++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L~~-Lp~-~i~~l-~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~ 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTV-LQS-ELESC-KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL 422 (567)
T ss_dssp STTTTSSSCCCCHHHHHH-HHH-HHHHH-HHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH
T ss_pred ccCccceeccCChhhHHh-hHH-HHHHH-HHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc
Confidence 344455555555555542 232 34444 345555554443 3445555666666666665 444432
Q ss_pred cCCCCc-----ccc--CCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCccc
Q 036342 199 NGSIPI-----TLG--KLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLT 271 (596)
Q Consensus 199 ~~~~p~-----~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 271 (596)
...... .+. ....|+.|+|++|.|++ +|. +..+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|.|+
T Consensus 423 ~~L~~l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 499 (567)
T 1dce_A 423 DDLRSKFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE 499 (567)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred chhhhhhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCC
Confidence 210000 000 00134455555555543 333 445555555555555554 34445555555555555555555
Q ss_pred CCCcccccccccceEEcccCCCCCch-hhhhccccccceEecCCCcCccc
Q 036342 272 SIPLTFWNLKDILQLNFSSNFLTGPL-LLEIGNLKVLIGIDFSMNNFSGV 320 (596)
Q Consensus 272 ~ip~~~~~l~~L~~L~ls~N~l~~~~-~~~~~~l~~L~~L~ls~N~~~~~ 320 (596)
++| .+..+++|+.|+|++|+|++.. |..+..+++|+.|++++|.+++.
T Consensus 500 ~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 500 NVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp CCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGS
T ss_pred CCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCC
Confidence 554 4444555555555555555443 44455555555555555555433
No 373
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=2.4e-19 Score=200.76 Aligned_cols=162 Identities=22% Similarity=0.227 Sum_probs=124.1
Q ss_pred EccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 168 YMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 168 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
+++.|.+. ..+..|..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|+|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 33444444 56788999999999999999998 56666668999999999999999 88999999999999999999999
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccc-cceEecCCCcCcccCChhhh
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKV-LIGIDFSMNNFSGVIPREIG 326 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~-L~~L~ls~N~~~~~~~~~~~ 326 (596)
.+|..|+.+++|++|+|++|.|+.+|..+..+++|+.|+|++|+|++.+|..+..+.. +..+++++|.+++.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~--- 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH--- 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_pred -ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc---
Confidence 6799999999999999999999999999999999999999999999999988876543 23478999999988775
Q ss_pred ccCCCCCeEECCCC
Q 036342 327 EKLSYLEDLNLSFN 340 (596)
Q Consensus 327 ~~l~~L~~L~l~~N 340 (596)
.|+.|+++.|
T Consensus 360 ----~l~~l~l~~n 369 (727)
T 4b8c_D 360 ----ERRFIEINTD 369 (727)
T ss_dssp ----C---------
T ss_pred ----ccceeEeecc
Confidence 3566777777
No 374
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=3.9e-18 Score=159.05 Aligned_cols=133 Identities=29% Similarity=0.326 Sum_probs=114.4
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccC
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGM 92 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 92 (596)
++|++++|+++ .+|..+. .+|++|+|++|++++..+...+..+++|++|+|++|+|++..|.+|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999996 5666553 38999999999998655544456699999999999999988899999999999999999
Q ss_pred CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCC
Q 036342 93 NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILP 153 (596)
Q Consensus 93 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~ 153 (596)
|+|+++.+..|.++++|++|+|++|+++++.+. .|..+++|++|+|++|.+++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPG-----SFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTT-----SSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHH-----HhhcCCCCCEEEeCCCCccCcCc
Confidence 999999999999999999999999999987554 58889999999999999987644
No 375
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.75 E-value=1e-16 Score=166.70 Aligned_cols=245 Identities=15% Similarity=0.186 Sum_probs=151.5
Q ss_pred CCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEE
Q 036342 9 LQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKL 88 (596)
Q Consensus 9 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 88 (596)
.++++.+.+. |.++.+...+|.+. +|+.+++..| ++ .++..+|.. .+|+.++|.. .++.+.+.+|.++++|+.+
T Consensus 112 ~~~l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEE
T ss_pred cCCccEEEEC-CccCEehHhhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCee
Confidence 3566677764 45666666777764 6777777666 54 566666655 4677777775 5665666777777777777
Q ss_pred EccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEE
Q 036342 89 SLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFY 168 (596)
Q Consensus 89 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~ 168 (596)
+|++|.++.+...+|. ..+|+.+.+..+ ++.+... +|.++++|+.+++..| ++.+ +...|.+ .+|+.+.
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~-----aF~~~~~L~~l~l~~~-l~~I-~~~aF~~--~~L~~i~ 254 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQ-----AFLKTSQLKTIEIPEN-VSTI-GQEAFRE--SGITTVK 254 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTT-----TTTTCTTCCCEECCTT-CCEE-CTTTTTT--CCCSEEE
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhh-----HhhCCCCCCEEecCCC-ccCc-ccccccc--CCccEEE
Confidence 7777777777777776 467777777644 5555444 5777777777777764 3333 3334444 4566666
Q ss_pred ccccccccccChhccCCCCCCEEEccCCccc-----CCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccC
Q 036342 169 MYNCNISGGIPEEISNLTNLVEIDLGGNKLN-----GSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243 (596)
Q Consensus 169 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 243 (596)
+ .+.++.+.+.+|.++++|+.+++.+|.+. .+.+.+|.++++|+.+++.+ .++..-...|.++.+|+.+++..
T Consensus 255 l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~ 332 (401)
T 4fdw_A 255 L-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPA 332 (401)
T ss_dssp E-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECT
T ss_pred e-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECc
Confidence 6 44455566666666666666666666554 34455666666666666663 35444444555556666666643
Q ss_pred CcCcccchhhhccCCCCcEEEeCCCcccCCC
Q 036342 244 NKLYGSIPACFGNLASLRILSLGSNKLTSIP 274 (596)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip 274 (596)
| ++.+.+.+|.++ +|+.+++++|.+..++
T Consensus 333 ~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~ 361 (401)
T 4fdw_A 333 N-VTQINFSAFNNT-GIKEVKVEGTTPPQVF 361 (401)
T ss_dssp T-CCEECTTSSSSS-CCCEEEECCSSCCBCC
T ss_pred c-ccEEcHHhCCCC-CCCEEEEcCCCCcccc
Confidence 3 444445555555 5666666665555543
No 376
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.75 E-value=4.3e-19 Score=186.14 Aligned_cols=144 Identities=19% Similarity=0.273 Sum_probs=108.9
Q ss_pred hcccccccccccCCCceeehhhH------------------------HhHHHHHHHHhhcCC-Ccccee-----------
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF------------------------KSFDVECEMMKSIRH-RNLIKV----------- 486 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~------------------------~~~~~e~~~l~~l~H-~niv~l----------- 486 (596)
.+..|...+.||+|+||+||+|. +.+.+|+.+++.++| +|....
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 45568888999999999999863 357799999999987 222111
Q ss_pred ----------eeeecc-----CCeeEEEEecCCCCCHHHHHh------hCCCCCCHHHHHHHHHHHHHHHHHHhccCCCc
Q 036342 487 ----------ISSCSN-----EEFKALVLEYMPHGSLEKYLY------SSNCILDIFQRLNIMIDVASALEYLHFGYSAL 545 (596)
Q Consensus 487 ----------~~~~~~-----~~~~~lV~e~~~~g~L~~~l~------~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~ 545 (596)
..++.. ....+++|+++ +|+|.+++. .....+++..++.++.|+++||+||| ..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 111111 11356777766 689999884 22345678889999999999999999 899
Q ss_pred eEeCCCCCCCeeeCCCCcEEEeccccccccCCCCCccccccccccccccCC
Q 036342 546 VIHCDLKPSNVLLDDNMVAHLSDFSIAKLLTGEDQSMTQTQTLGTIGYMAP 596 (596)
Q Consensus 546 i~Hrdlk~~NILl~~~~~~kl~dfGla~~~~~~~~~~~~~~~~gt~~y~aP 596 (596)
|+||||||+|||++.++.+||+|||+++.... .....+| +.||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 276 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----SAVSPIG-RGFAPP 276 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTE-----EECCCCC-TTTCCH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCC-----ccccCCC-CceeCc
Confidence 99999999999999999999999999886432 1344578 999998
No 377
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.75 E-value=6.2e-19 Score=197.51 Aligned_cols=215 Identities=21% Similarity=0.184 Sum_probs=94.3
Q ss_pred CCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCcc--------ccCccCccCCCCccEEEccCCccccccCccccC
Q 036342 10 QNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSG--------SLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFN 81 (596)
Q Consensus 10 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 81 (596)
+.++.|+|.+|.+.. .+..+ |+.++|++|.|.+ .+++..+..+++|+.|+|++|.+. .+|..+++
T Consensus 173 ~~~~~l~L~~n~~~~-~~~~~-----l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~ 245 (727)
T 4b8c_D 173 PLTPKIELFANGKDE-ANQAL-----LQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK 245 (727)
T ss_dssp -------------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG
T ss_pred CccceEEeeCCCCCc-chhhH-----hhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC
Confidence 346667777777654 23322 2333333333321 122333344677777777777776 56666667
Q ss_pred CCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccc
Q 036342 82 ASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLS 161 (596)
Q Consensus 82 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~ 161 (596)
+++|++|+|++|.|+ .+|..|.+|++|++|+|++|.|+.++. .|.++++|++|+|++|.|+ .+|. .+..+
T Consensus 246 l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~------~~~~l~~L~~L~L~~N~l~-~lp~-~~~~l- 315 (727)
T 4b8c_D 246 YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPA------ELGSCFQLKYFYFFDNMVT-TLPW-EFGNL- 315 (727)
T ss_dssp CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCS------SGGGGTTCSEEECCSSCCC-CCCS-STTSC-
T ss_pred CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccCh------hhcCCCCCCEEECCCCCCC-ccCh-hhhcC-
Confidence 777777777777777 556667777777777777777775432 3666777777777777775 3454 36666
Q ss_pred ccccEEEccccccccccChhccCCCC-CCEEEccCCcccCCCCccccCCCCCCeEEccCC--------cccccCccchhc
Q 036342 162 RSLEEFYMYNCNISGGIPEEISNLTN-LVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN--------ILEGSIPDDICR 232 (596)
Q Consensus 162 ~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N--------~l~~~~~~~~~~ 232 (596)
++|++|+|++|.|++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .+.+..+..+..
T Consensus 316 ~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~ 389 (727)
T 4b8c_D 316 CNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQSTEHLATD 389 (727)
T ss_dssp TTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------------
T ss_pred CCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccccccchhhc
Confidence 56777777777777777766654321 123667777777666643 345555555 333333444455
Q ss_pred CCCCcEEEccCCcCc
Q 036342 233 LAELYRLELGSNKLY 247 (596)
Q Consensus 233 l~~L~~L~Ls~N~l~ 247 (596)
+..+....++.|-+.
T Consensus 390 l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 390 LAKRTFTVLSYNTLC 404 (727)
T ss_dssp ------------CCC
T ss_pred ccccceeeeeccccc
Confidence 566666777777664
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.72 E-value=1.6e-17 Score=151.27 Aligned_cols=131 Identities=24% Similarity=0.217 Sum_probs=64.9
Q ss_pred CCCCEEEccCCccc-CCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEE
Q 036342 186 TNLVEIDLGGNKLN-GSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILS 264 (596)
Q Consensus 186 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 264 (596)
++|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 34444455555555555555555533 4445555555555555555544555555555555555
Q ss_pred eCCCcccCCC--cccccccccceEEcccCCCCCchh---hhhccccccceEecCCCcCc
Q 036342 265 LGSNKLTSIP--LTFWNLKDILQLNFSSNFLTGPLL---LEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 265 Ls~N~l~~ip--~~~~~l~~L~~L~ls~N~l~~~~~---~~~~~l~~L~~L~ls~N~~~ 318 (596)
|++|.++.+| ..+..+++|+.|++++|++++..+ ..+..+++|+.||+++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 5555555543 334444444444444444443332 23444444444444444443
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.71 E-value=3.9e-16 Score=162.24 Aligned_cols=249 Identities=14% Similarity=0.165 Sum_probs=208.0
Q ss_pred ccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCC
Q 036342 5 EIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASK 84 (596)
Q Consensus 5 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 84 (596)
+|.+. +|+.+++..+ ++.+...+|.+ .+|+.+++.. .++ .++..+|..+++|+.++|++|+++.+...+|. ..+
T Consensus 131 aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 46664 7999999876 88888889988 4799999986 675 67788888899999999999999966666666 589
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccc
Q 036342 85 LSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSL 164 (596)
Q Consensus 85 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L 164 (596)
|+.+.|.. .++.+...+|.++.+|+.+++..| ++.+... +|.+ .+|+.+++. +.++.+ +...|..+ ++|
T Consensus 205 L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~-----aF~~-~~L~~i~lp-~~i~~I-~~~aF~~c-~~L 273 (401)
T 4fdw_A 205 IEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPEN-VSTIGQE-----AFRE-SGITTVKLP-NGVTNI-ASRAFYYC-PEL 273 (401)
T ss_dssp CSEEECCT-TCCEECTTTTTTCTTCCCEECCTT-CCEECTT-----TTTT-CCCSEEEEE-TTCCEE-CTTTTTTC-TTC
T ss_pred cCEEEeCC-chheehhhHhhCCCCCCEEecCCC-ccCcccc-----cccc-CCccEEEeC-CCccEE-ChhHhhCC-CCC
Confidence 99999985 488899999999999999999986 6666554 5777 789999995 456544 44477777 789
Q ss_pred cEEEccccccc-----cccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEE
Q 036342 165 EEFYMYNCNIS-----GGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRL 239 (596)
Q Consensus 165 ~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 239 (596)
+.+++.+|.+. .+.+.+|.++++|+.+++. +.++.+...+|.++++|+.+++..| ++..-+..|.++ +|+.+
T Consensus 274 ~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 274 AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred CEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 99999998876 5778999999999999999 4588788899999999999999765 765677789999 99999
Q ss_pred EccCCcCcccchhhhccCC-CCcEEEeCCCcccCC
Q 036342 240 ELGSNKLYGSIPACFGNLA-SLRILSLGSNKLTSI 273 (596)
Q Consensus 240 ~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~i 273 (596)
++++|.+....+..|.+++ +++.|.+..+.+...
T Consensus 351 ~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~~y 385 (401)
T 4fdw_A 351 KVEGTTPPQVFEKVWYGFPDDITVIRVPAESVEKY 385 (401)
T ss_dssp EECCSSCCBCCCSSCCCSCTTCCEEEECGGGHHHH
T ss_pred EEcCCCCcccccccccCCCCCccEEEeCHHHHHHh
Confidence 9999999877888888885 788888888776553
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=2.3e-17 Score=150.30 Aligned_cols=130 Identities=25% Similarity=0.259 Sum_probs=71.8
Q ss_pred cccEEEccccccc-cccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEc
Q 036342 163 SLEEFYMYNCNIS-GGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLEL 241 (596)
Q Consensus 163 ~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 241 (596)
+|++|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 102 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNL 102 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEEC
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEec
Confidence 4555555555554 34444455555555555555555543 44555555555666655555445555555556666666
Q ss_pred cCCcCcccch-hhhccCCCCcEEEeCCCcccCCCc----ccccccccceEEcccCCCC
Q 036342 242 GSNKLYGSIP-ACFGNLASLRILSLGSNKLTSIPL----TFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 242 s~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~ip~----~~~~l~~L~~L~ls~N~l~ 294 (596)
++|++++..+ ..+..+++|++|++++|.++.+|. .+..+++|++|++++|.+.
T Consensus 103 s~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 103 SGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp BSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred cCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6665554321 455555666666666666665554 4555566666666666554
No 381
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.71 E-value=6.3e-18 Score=167.45 Aligned_cols=122 Identities=16% Similarity=0.198 Sum_probs=99.1
Q ss_pred HHHHhcccccccccccCCCceeehhhH--------------------------------------HhHHHHHHHHhhcCC
Q 036342 439 ELCRATDEFSENNLIGRGGFALFIRAF--------------------------------------KSFDVECEMMKSIRH 480 (596)
Q Consensus 439 ~~~~~~~~~~~~~~ig~G~~g~v~~~~--------------------------------------~~~~~e~~~l~~l~H 480 (596)
.+......|+..+.||+|+||.||+|. ..+.+|+.++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~- 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ- 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-
Confidence 444445567778999999999999752 12678999999999
Q ss_pred CccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCC
Q 036342 481 RNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDD 560 (596)
Q Consensus 481 ~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~ 560 (596)
| +++.+++.. +..|+||||+++|+|.+ +.. .....++.|++.|+.|+| ..+|+||||||+|||++
T Consensus 163 -~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~- 227 (282)
T 1zar_A 163 -G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS- 227 (282)
T ss_dssp -T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-
T ss_pred -C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-
Confidence 4 666665543 45699999999999988 422 123469999999999999 89999999999999999
Q ss_pred CCcEEEeccccccccC
Q 036342 561 NMVAHLSDFSIAKLLT 576 (596)
Q Consensus 561 ~~~~kl~dfGla~~~~ 576 (596)
++.+||+|||+|+...
T Consensus 228 ~~~vkl~DFG~a~~~~ 243 (282)
T 1zar_A 228 EEGIWIIDFPQSVEVG 243 (282)
T ss_dssp TTEEEECCCTTCEETT
T ss_pred CCcEEEEECCCCeECC
Confidence 9999999999998653
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.70 E-value=3.8e-17 Score=145.66 Aligned_cols=111 Identities=23% Similarity=0.266 Sum_probs=56.5
Q ss_pred ccccEEEccccccc-cccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEE
Q 036342 162 RSLEEFYMYNCNIS-GGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLE 240 (596)
Q Consensus 162 ~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 240 (596)
++++.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 44555555555555555555555543 4445555555555555555544444444455555555
Q ss_pred ccCCcCccc-chhhhccCCCCcEEEeCCCcccCCC
Q 036342 241 LGSNKLYGS-IPACFGNLASLRILSLGSNKLTSIP 274 (596)
Q Consensus 241 Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~ip 274 (596)
+++|++++. .+..+..+++|++|++++|.++++|
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 129 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLN 129 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGST
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchH
Confidence 555555432 1244444444444444444444443
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.69 E-value=6.1e-17 Score=144.29 Aligned_cols=128 Identities=20% Similarity=0.204 Sum_probs=102.7
Q ss_pred CCCCCEEEccCCccc-CCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEE
Q 036342 185 LTNLVEIDLGGNKLN-GSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRIL 263 (596)
Q Consensus 185 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 263 (596)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367888888888887 66777778888888888888888854 677788888888888888887678777778888888
Q ss_pred EeCCCcccCCC--cccccccccceEEcccCCCCCchh---hhhccccccceEecCC
Q 036342 264 SLGSNKLTSIP--LTFWNLKDILQLNFSSNFLTGPLL---LEIGNLKVLIGIDFSM 314 (596)
Q Consensus 264 ~Ls~N~l~~ip--~~~~~l~~L~~L~ls~N~l~~~~~---~~~~~l~~L~~L~ls~ 314 (596)
++++|.++++| ..+..+++|++|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888888865 677788888888888888887665 5677888888888763
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=4e-16 Score=145.45 Aligned_cols=128 Identities=21% Similarity=0.271 Sum_probs=95.3
Q ss_pred CEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccC
Q 036342 13 EELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGM 92 (596)
Q Consensus 13 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 92 (596)
+++++++|+|+ .+|..+ .++|++|+|++|+++ .++. .+..+++|++|+|++|+|++..+.+|.++++|++|+|++
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~-~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPK-ELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCG-GGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHH-HhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 57788888876 455544 357888888888886 4442 344577888888888888877777788888888888888
Q ss_pred CcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCc
Q 036342 93 NSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDG 150 (596)
Q Consensus 93 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 150 (596)
|+|+++.+.+|.++++|++|+|++|.++.+++. .|..+++|+.|+|++|++..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~-----~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEG-----AFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTT-----TTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChh-----hhhcCccccEEEeCCCCeec
Confidence 888887777888888888888888888776554 46777788888888877753
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=6.6e-16 Score=143.94 Aligned_cols=107 Identities=27% Similarity=0.384 Sum_probs=53.2
Q ss_pred cccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEcc
Q 036342 163 SLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELG 242 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls 242 (596)
++++|++++|.|+ .+|..|.++++|++|+|++|.|++..+.+|.++++|++|+|++|.|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4445555555544 233455555555555555555555544555555555555555555554444444445555555555
Q ss_pred CCcCcccchhhhccCCCCcEEEeCCCcc
Q 036342 243 SNKLYGSIPACFGNLASLRILSLGSNKL 270 (596)
Q Consensus 243 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 270 (596)
+|+++...+..|..+++|+.|+|++|.+
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 5555444444444444444444444444
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.3e-15 Score=139.87 Aligned_cols=110 Identities=26% Similarity=0.325 Sum_probs=59.7
Q ss_pred CCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEe
Q 036342 186 TNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSL 265 (596)
Q Consensus 186 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 265 (596)
++|++|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..|..+++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 45555555555555555555555555555555555555444444455555555555555555555555555555666655
Q ss_pred CCCcccCCCcc-cccccccceEEcccCCCCC
Q 036342 266 GSNKLTSIPLT-FWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 266 s~N~l~~ip~~-~~~l~~L~~L~ls~N~l~~ 295 (596)
++|.++.+|.. +..+++|++|++++|++++
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 55555555443 2334555555555555443
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=1.7e-15 Score=139.09 Aligned_cols=132 Identities=23% Similarity=0.240 Sum_probs=99.1
Q ss_pred CCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEc
Q 036342 138 LTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNL 217 (596)
Q Consensus 138 L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 217 (596)
.+.+++++|.++.+ |. .++++|++|++++|++++..+..|..+++|++|++++|.+++..+..|..+++|++|++
T Consensus 9 ~~~l~~~~~~l~~~-p~----~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 83 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PT----GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYL 83 (177)
T ss_dssp TTEEECCSSCCSSC-CT----TCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCEEEecCCCCccC-CC----CCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEEC
Confidence 34566666666543 21 12256777777777777766677788888888888888888777777788888888888
Q ss_pred cCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCC
Q 036342 218 EDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIP 274 (596)
Q Consensus 218 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip 274 (596)
++|.|++..+..+..+++|++|++++|++++..+..|..+++|++|+|++|.+...+
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 888888666666778888888888888888776667788888888888888887643
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.64 E-value=2.7e-16 Score=144.36 Aligned_cols=110 Identities=23% Similarity=0.192 Sum_probs=58.2
Q ss_pred ccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCc
Q 036342 182 ISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLR 261 (596)
Q Consensus 182 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 261 (596)
+.++.+|+.|++++|.++.. |......++|++|++++|.|++. ..+..+++|++|++++|.+++..+..|..+++|+
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-CCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred cCCcCCceEEEeeCCCCchh-HHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 44555666666666666532 33222223566666666666543 3455555666666666665544444445555666
Q ss_pred EEEeCCCcccCCCc--ccccccccceEEcccCCCC
Q 036342 262 ILSLGSNKLTSIPL--TFWNLKDILQLNFSSNFLT 294 (596)
Q Consensus 262 ~L~Ls~N~l~~ip~--~~~~l~~L~~L~ls~N~l~ 294 (596)
+|+|++|.++.+|. .+..+++|+.|++++|+++
T Consensus 92 ~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 92 ELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp EEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred EEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 66666665555554 3444444444444444444
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.63 E-value=5.8e-18 Score=158.77 Aligned_cols=133 Identities=23% Similarity=0.225 Sum_probs=63.4
Q ss_pred cccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCcccccccccc
Q 036342 205 TLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPLTFWNLKDIL 284 (596)
Q Consensus 205 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~ 284 (596)
.+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..+++|+.|+|++|.++++| .+..+++|+
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~ 118 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIASLS-GIEKLVNLR 118 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCC
Confidence 44444444444444444442 33 4444444444444444444 33344444444555555555554444 344445555
Q ss_pred eEEcccCCCCCchh-hhhccccccceEecCCCcCcccCCh---------hhhccCCCCCeEECCCCccc
Q 036342 285 QLNFSSNFLTGPLL-LEIGNLKVLIGIDFSMNNFSGVIPR---------EIGEKLSYLEDLNLSFNKLK 343 (596)
Q Consensus 285 ~L~ls~N~l~~~~~-~~~~~l~~L~~L~ls~N~~~~~~~~---------~~~~~l~~L~~L~l~~N~l~ 343 (596)
+|++++|++++... ..+..+++|+.|++++|.+++.+|. ..+..+++|+.|| +|+++
T Consensus 119 ~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 119 VLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred EEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 55555555544322 3445555555555555555443222 1344566666665 44443
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.61 E-value=1.6e-17 Score=155.72 Aligned_cols=150 Identities=21% Similarity=0.243 Sum_probs=122.0
Q ss_pred cccEEEccccccccccCh------hccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCC
Q 036342 163 SLEEFYMYNCNISGGIPE------EISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAEL 236 (596)
Q Consensus 163 ~L~~L~l~~n~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 236 (596)
.++.++++.+.+++..|. .|..+++|++|++++|.+++ +| .+..+++|++|++++|.++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 455555555555555554 88889999999999999986 55 8888999999999999998 678778888899
Q ss_pred cEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc--ccccccccceEEcccCCCCCchhh----------hhccc
Q 036342 237 YRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL--TFWNLKDILQLNFSSNFLTGPLLL----------EIGNL 304 (596)
Q Consensus 237 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~--~~~~l~~L~~L~ls~N~l~~~~~~----------~~~~l 304 (596)
++|++++|++++ +| .+..+++|++|+|++|.++.++. .+..+++|++|++++|++++..|. .+..+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l 173 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRL 173 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhC
Confidence 999999999985 45 58888999999999999998765 678899999999999999876554 37888
Q ss_pred cccceEecCCCcCcc
Q 036342 305 KVLIGIDFSMNNFSG 319 (596)
Q Consensus 305 ~~L~~L~ls~N~~~~ 319 (596)
++|+.|| +|.++.
T Consensus 174 ~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 174 PNLKKLD--GMPVDV 186 (198)
T ss_dssp SSCSEEC--CGGGTT
T ss_pred CCcEEEC--CcccCH
Confidence 9999887 676653
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=1.6e-15 Score=139.17 Aligned_cols=132 Identities=19% Similarity=0.184 Sum_probs=66.5
Q ss_pred CCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCC
Q 036342 132 LSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRK 211 (596)
Q Consensus 132 ~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 211 (596)
+.++++|+.|++++|.++.+ + .+..+.++|++|++++|.|++. .. |..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i-~--~~~~~~~~L~~L~Ls~N~l~~~--~~------------------------l~~l~~ 65 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVI-E--NLGATLDQFDAIDFSDNEIRKL--DG------------------------FPLLRR 65 (176)
T ss_dssp EECTTSCEEEECTTSCCCSC-C--CGGGGTTCCSEEECCSSCCCEE--CC------------------------CCCCSS
T ss_pred cCCcCCceEEEeeCCCCchh-H--HhhhcCCCCCEEECCCCCCCcc--cc------------------------cccCCC
Confidence 45566666667666666643 2 1223322455555555555443 33 444455
Q ss_pred CCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchh--hhccCCCCcEEEeCCCcccCCCcc----cccccccce
Q 036342 212 LQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPA--CFGNLASLRILSLGSNKLTSIPLT----FWNLKDILQ 285 (596)
Q Consensus 212 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~ip~~----~~~l~~L~~ 285 (596)
|++|++++|.|++..+..+..+++|++|++++|+++ .+|. .+..+++|+.|++++|.++.+|.. +..+++|+.
T Consensus 66 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~ 144 (176)
T 1a9n_A 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRV 144 (176)
T ss_dssp CCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSE
T ss_pred CCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccce
Confidence 555555555554332233345555555555555553 2332 455555566666666665555543 444555555
Q ss_pred EEcccCCC
Q 036342 286 LNFSSNFL 293 (596)
Q Consensus 286 L~ls~N~l 293 (596)
|++++|.+
T Consensus 145 Ld~~~n~~ 152 (176)
T 1a9n_A 145 LDFQKVKL 152 (176)
T ss_dssp ETTEECCH
T ss_pred eCCCcCCH
Confidence 55555544
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.61 E-value=3.3e-14 Score=148.00 Aligned_cols=309 Identities=14% Similarity=0.092 Sum_probs=173.9
Q ss_pred cCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCC
Q 036342 6 IGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKL 85 (596)
Q Consensus 6 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 85 (596)
|.++++|+.+.+. +.++.+...+|.++++|+.+++..+ ++ .+...+|....+|+.+.+..+ +......+|.+...+
T Consensus 67 F~~c~~L~~i~lp-~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~ 142 (394)
T 4fs7_A 67 FQGCRKVTEIKIP-STVREIGEFAFENCSKLEIINIPDS-VK-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFK 142 (394)
T ss_dssp TTTCTTEEEEECC-TTCCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCS
T ss_pred hhCCCCceEEEeC-CCccCcchhHhhCCCCCcEEEeCCC-ce-EccchhhcccccchhhcccCc-eeeecceeeeccccc
Confidence 5566666666664 3355555666666666666666544 43 455555555666666655543 333444455554433
Q ss_pred CEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhccccccc
Q 036342 86 SKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLE 165 (596)
Q Consensus 86 ~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~ 165 (596)
+..... .+..+...+|.++.+|+.+.+..+ +..+... +|.++.+|+.+++..| ++.+ +...+.+. ..|+
T Consensus 143 ~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~-----~F~~c~~L~~i~l~~~-~~~I-~~~~F~~~-~~L~ 211 (394)
T 4fs7_A 143 EITIPE--GVTVIGDEAFATCESLEYVSLPDS-METLHNG-----LFSGCGKLKSIKLPRN-LKII-RDYCFAEC-ILLE 211 (394)
T ss_dssp EEECCT--TCCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCBCCCCTT-CCEE-CTTTTTTC-TTCC
T ss_pred ccccCc--cccccchhhhcccCCCcEEecCCc-cceeccc-----cccCCCCceEEEcCCC-ceEe-Cchhhccc-cccc
Confidence 322222 222344556666666666666544 2223222 4666666666666554 3222 22244444 4555
Q ss_pred EEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCc
Q 036342 166 EFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNK 245 (596)
Q Consensus 166 ~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 245 (596)
.+.+.++... +...+....+|+.+.+..+ +..+...+|.++..|+.+.+..+... .....|..+..++.+....+.
T Consensus 212 ~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~ 287 (394)
T 4fs7_A 212 NMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVI 287 (394)
T ss_dssp BCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSE
T ss_pred eeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCcee
Confidence 5555544332 1222333456666666543 23344556666777777777666544 455566666677776666543
Q ss_pred CcccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChh
Q 036342 246 LYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPRE 324 (596)
Q Consensus 246 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~ 324 (596)
+ ....|..+.+|+.+.+..+ ++.|+. +|.++.+|+.+++..+ ++......|.++++|+.+++..| +. .++..
T Consensus 288 i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~ 360 (394)
T 4fs7_A 288 V---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGAN 360 (394)
T ss_dssp E---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTT
T ss_pred e---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHH
Confidence 2 2345666777777777544 555544 4566777777777543 66566667777777777777655 44 45555
Q ss_pred hhccCCCCCeEECCCC
Q 036342 325 IGEKLSYLEDLNLSFN 340 (596)
Q Consensus 325 ~~~~l~~L~~L~l~~N 340 (596)
+|..+++|+++++..+
T Consensus 361 aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 361 AFQGCINLKKVELPKR 376 (394)
T ss_dssp TBTTCTTCCEEEEEGG
T ss_pred HhhCCCCCCEEEECCC
Confidence 6777777777776543
No 393
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.54 E-value=1.1e-15 Score=149.40 Aligned_cols=119 Identities=19% Similarity=0.167 Sum_probs=92.3
Q ss_pred cccccccccCCCceeehhhH------------H-----------------------------------hHHHHHHHHhhc
Q 036342 446 EFSENNLIGRGGFALFIRAF------------K-----------------------------------SFDVECEMMKSI 478 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~~------------~-----------------------------------~~~~e~~~l~~l 478 (596)
-|+..+.||+|+||.||+|. + .+.+|+.+++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999752 1 356799999999
Q ss_pred CCCcc--ceeeeeeccCCeeEEEEecCCC-C----CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCC
Q 036342 479 RHRNL--IKVISSCSNEEFKALVLEYMPH-G----SLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDL 551 (596)
Q Consensus 479 ~H~ni--v~l~~~~~~~~~~~lV~e~~~~-g----~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdl 551 (596)
+|+++ +..+++ +..++||||+.+ | +|.+.... .++..+..++.|++.|+.|||. ..+|+|||+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDl 197 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADL 197 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSC
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCC
Confidence 88864 444443 346899999942 4 67665432 1234567799999999999993 358999999
Q ss_pred CCCCeeeCCCCcEEEeccccccccC
Q 036342 552 KPSNVLLDDNMVAHLSDFSIAKLLT 576 (596)
Q Consensus 552 k~~NILl~~~~~~kl~dfGla~~~~ 576 (596)
||+|||+++ .++|+|||+|....
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEETT
T ss_pred CHHHEEEcC--cEEEEECcccccCC
Confidence 999999998 99999999998754
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=3.8e-13 Score=139.98 Aligned_cols=317 Identities=12% Similarity=0.064 Sum_probs=224.7
Q ss_pred CccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCc
Q 036342 22 LIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPS 101 (596)
Q Consensus 22 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~ 101 (596)
++.+...+|.++.+|+.+.+..+ ++ .+...+|..+.+|+.++|..+ ++.+...+|.+..+|+.+.+..+ +..+...
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~-i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~ 134 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST-VR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVE 134 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTT
T ss_pred EeEhHHHHhhCCCCceEEEeCCC-cc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecce
Confidence 45566677888888888888644 65 677777777888888888765 66566777888888888777644 5556777
Q ss_pred cccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccChh
Q 036342 102 TFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPEE 181 (596)
Q Consensus 102 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~~ 181 (596)
+|.+...++....... ..+.. .+|.++++|+.+.+.++. .. ++...|.+. .+|+.+.+..+ ++.+...+
T Consensus 135 aF~~~~~~~~~~~~~~--~~i~~-----~aF~~c~~L~~i~l~~~~-~~-I~~~~F~~c-~~L~~i~l~~~-~~~I~~~~ 203 (394)
T 4fs7_A 135 AFKGCDFKEITIPEGV--TVIGD-----EAFATCESLEYVSLPDSM-ET-LHNGLFSGC-GKLKSIKLPRN-LKIIRDYC 203 (394)
T ss_dssp TTTTCCCSEEECCTTC--CEECT-----TTTTTCTTCCEEECCTTC-CE-ECTTTTTTC-TTCCBCCCCTT-CCEECTTT
T ss_pred eeecccccccccCccc--cccch-----hhhcccCCCcEEecCCcc-ce-eccccccCC-CCceEEEcCCC-ceEeCchh
Confidence 7877765444433332 22222 268899999999997664 22 344466666 67888888776 66677788
Q ss_pred ccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCc
Q 036342 182 ISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLR 261 (596)
Q Consensus 182 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 261 (596)
|.++..|+.+.+..+... + ...+....+|+.+.+..+. +..-...|..+..|+.+.+..+... .....|..+..++
T Consensus 204 F~~~~~L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~ 279 (394)
T 4fs7_A 204 FAECILLENMEFPNSLYY-L-GDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLK 279 (394)
T ss_dssp TTTCTTCCBCCCCTTCCE-E-CTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCC
T ss_pred hccccccceeecCCCceE-e-ehhhcccCCCceEEECCCc-eecccccccccccceeEEcCCCcce-eeccccccccccc
Confidence 888899988888776543 2 2334455788888887543 3345567788889999999887654 6677888899999
Q ss_pred EEEeCCCcccCCCcccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhhccCCCCCeEECCCCc
Q 036342 262 ILSLGSNKLTSIPLTFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNK 341 (596)
Q Consensus 262 ~L~Ls~N~l~~ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~ 341 (596)
.+....+.+. ...|..+.+|+.+.+..+ ++......|.++.+|+.+++.++ ++ .|+..+|..+.+|+.+++..|
T Consensus 280 ~~~~~~~~i~--~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~- 353 (394)
T 4fs7_A 280 KVIYGSVIVP--EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS- 353 (394)
T ss_dssp EEEECSSEEC--TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-
T ss_pred eeccCceeec--cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-
Confidence 9888776532 235678899999999765 77677788999999999999754 65 577778889999999999876
Q ss_pred ccccCCCC-CCCCCCCccccccc
Q 036342 342 LKGEIPRG-GSFGNFSAESFEGN 363 (596)
Q Consensus 342 l~~~~p~~-~~~~~l~~l~~~~N 363 (596)
++...... ..+.+|+.+.+..+
T Consensus 354 l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 354 LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp CCEECTTTBTTCTTCCEEEEEGG
T ss_pred ccEehHHHhhCCCCCCEEEECCC
Confidence 54322222 23566777766543
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=4.7e-14 Score=128.49 Aligned_cols=106 Identities=25% Similarity=0.257 Sum_probs=55.8
Q ss_pred ccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccC
Q 036342 164 LEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGS 243 (596)
Q Consensus 164 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 243 (596)
.+.+++++|+++. +|..+ .++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 3444455554443 23222 14555555555555555555555555555555555555544444445555555555555
Q ss_pred CcCcccchhhhccCCCCcEEEeCCCcccC
Q 036342 244 NKLYGSIPACFGNLASLRILSLGSNKLTS 272 (596)
Q Consensus 244 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 272 (596)
|+|++..+..|..+++|++|+|++|.++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 55555444455555555555555555544
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=7.5e-14 Score=127.12 Aligned_cols=107 Identities=29% Similarity=0.359 Sum_probs=77.1
Q ss_pred CCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecC
Q 036342 36 LKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLD 115 (596)
Q Consensus 36 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~ 115 (596)
.++|++++|.++. +|... .++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.++.|.++++|++|+|+
T Consensus 11 ~~~l~~s~n~l~~-ip~~~---~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 86 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI---PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLN 86 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEeCCCCcCc-cCccC---CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECC
Confidence 4567777777763 44321 3577777777777777767777777788888888888877777777777888888888
Q ss_pred CCcCcCCCCCccccccCCCCCCCCEEECcCCCCCcc
Q 036342 116 ENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGI 151 (596)
Q Consensus 116 ~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~ 151 (596)
+|+|+++++. .|.++++|+.|+|++|+++..
T Consensus 87 ~N~l~~~~~~-----~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 87 DNQLKSIPRG-----AFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SSCCCCCCTT-----TTTTCTTCCEEECCSSCBCTT
T ss_pred CCccCEeCHH-----HhcCCCCCCEEEeCCCCCCCC
Confidence 8877776554 467777788888888877643
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=5.7e-14 Score=128.38 Aligned_cols=90 Identities=26% Similarity=0.252 Sum_probs=52.4
Q ss_pred CCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEe
Q 036342 186 TNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSL 265 (596)
Q Consensus 186 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 265 (596)
++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 33 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L 112 (174)
T 2r9u_A 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYL 112 (174)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEe
Confidence 45566666666666555555666666666666666665433334455666666666666665544445666666666666
Q ss_pred CCCcccCCCc
Q 036342 266 GSNKLTSIPL 275 (596)
Q Consensus 266 s~N~l~~ip~ 275 (596)
++|.+...+.
T Consensus 113 ~~N~~~c~~~ 122 (174)
T 2r9u_A 113 YNNPWDCECR 122 (174)
T ss_dssp CSSCBCTTBG
T ss_pred CCCCcccccc
Confidence 6666655443
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.8e-13 Score=125.06 Aligned_cols=105 Identities=30% Similarity=0.370 Sum_probs=76.6
Q ss_pred CEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 37 KFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 37 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
+.+++++|+++ .+|... .++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..|.++++|++|+|++
T Consensus 15 ~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 56777777775 444421 25777788888877777777777788888888888888777777777788888888888
Q ss_pred CcCcCCCCCccccccCCCCCCCCEEECcCCCCCc
Q 036342 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDG 150 (596)
Q Consensus 117 N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 150 (596)
|+|+.+++. .|..+++|+.|+|++|++..
T Consensus 91 N~l~~l~~~-----~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRG-----AFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTT-----TTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHH-----HhccccCCCEEEeCCCCccc
Confidence 887776543 36777778888888887764
No 399
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.44 E-value=8.8e-12 Score=129.59 Aligned_cols=298 Identities=13% Similarity=0.144 Sum_probs=141.4
Q ss_pred ccchhhhCCC-CCCEEEccCCcCccccCccCccCCCCccEEEccCCc---cccccCccccCCCCCCEEEccCCcccccCC
Q 036342 25 TVPAAIFNVS-TLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNN---FSGTIPRFIFNASKLSKLSLGMNSFSGFIP 100 (596)
Q Consensus 25 ~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 100 (596)
+...+|.+.. .|+.+.+-.+ ++ .+...+|..+.+|+.+.+..|. ++.+...+|.+..+|+.+.+..+ ++.+..
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~ 130 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDS 130 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECT
T ss_pred cCHhhccCCCCcCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehh
Confidence 3344454442 3555555432 33 4444555555555555555442 44344445555555555554433 344445
Q ss_pred ccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccEEEccccccccccCh
Q 036342 101 STFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEEFYMYNCNISGGIPE 180 (596)
Q Consensus 101 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~L~l~~n~l~~~~~~ 180 (596)
.+|.++.+|+.+.+..+ +..+... +|.++.+|+.+.+..+ ++.+ ....|.. ..|+.+.+..+- +.+...
T Consensus 131 ~aF~~c~~L~~i~lp~~-~~~I~~~-----~F~~c~~L~~i~~~~~-~~~I-~~~aF~~--~~l~~i~ip~~~-~~i~~~ 199 (394)
T 4gt6_A 131 EAFHHCEELDTVTIPEG-VTSVADG-----MFSYCYSLHTVTLPDS-VTAI-EERAFTG--TALTQIHIPAKV-TRIGTN 199 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTT-----TTTTCTTCCEEECCTT-CCEE-CTTTTTT--CCCSEEEECTTC-CEECTT
T ss_pred hhhhhhcccccccccce-eeeeccc-----ceecccccccccccce-eeEe-ccccccc--cceeEEEECCcc-cccccc
Confidence 55555555555555432 2222222 3555555555555443 2222 1223322 245555554332 223445
Q ss_pred hccCCCCCCEEEccCCcccCCCCccc-------------cCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcCc
Q 036342 181 EISNLTNLVEIDLGGNKLNGSIPITL-------------GKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 181 ~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 247 (596)
+|.+..+++......+.........+ .....+..+.+.+ .++..-...|.++.+|+.+.+..+...
T Consensus 200 af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 200 AFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp TTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred hhhhccccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce
Confidence 55555555555544433221111111 1112223333322 222233345555566666666544332
Q ss_pred ccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhhh
Q 036342 248 GSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREIG 326 (596)
Q Consensus 248 ~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~~ 326 (596)
+...+|.++++|+.+.+. +.++.|+. .|.++.+|+.+.+..+ ++......|.++.+|+.+.+..+ ++ .|...+|
T Consensus 279 -I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF 353 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VT-KIPESAF 353 (394)
T ss_dssp -ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CC-BCCGGGG
T ss_pred -ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cC-EEhHhHh
Confidence 444556666666666664 34555544 3445666666666543 44455556666666666666433 43 4555566
Q ss_pred ccCCCCCeEECCCCcc
Q 036342 327 EKLSYLEDLNLSFNKL 342 (596)
Q Consensus 327 ~~l~~L~~L~l~~N~l 342 (596)
..+++|+.+++.+|..
T Consensus 354 ~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 354 SNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTCTTCCEEEESSCHH
T ss_pred hCCCCCCEEEECCcee
Confidence 6666666666666543
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.43 E-value=2.6e-15 Score=154.50 Aligned_cols=116 Identities=20% Similarity=0.209 Sum_probs=58.3
Q ss_pred CCCCEEEccCCcCccccCc-cCc---cCCCCccEEEccCCccccccCcccc-CCCCCCEEEccCCcccccCCcccc----
Q 036342 34 STLKFLGLQNNSLSGSLSS-IAN---VRLPNLEKLYLWGNNFSGTIPRFIF-NASKLSKLSLGMNSFSGFIPSTFG---- 104 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~~~~-~~~---~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~~~~~~---- 104 (596)
++|+.|+|++|.++..... +.. ...++|++|+|++|.++......+. .+++|++|+|++|.|+......+.
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 4555666666655421110 110 0124566666666665432222222 244566666666666544333332
Q ss_pred -CCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCc
Q 036342 105 -NLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDG 150 (596)
Q Consensus 105 -~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~ 150 (596)
..++|++|+|++|.++..... .+...+..+++|++|+|++|.|++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~-~l~~~L~~~~~L~~L~Ls~N~l~~ 197 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVA-VLMEGLAGNTSVTHLSLLHTGLGD 197 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHH-HHHHHHHTCSSCCEEECTTSSCHH
T ss_pred hcCCccceeeCCCCCCChHHHH-HHHHHHhcCCCcCEEeCCCCCCCc
Confidence 345677777777766542111 122234566677777777777653
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.42 E-value=2.7e-11 Score=125.96 Aligned_cols=315 Identities=13% Similarity=0.143 Sum_probs=220.8
Q ss_pred ccCCCC-CCCEEECCCCCCccccchhhhCCCCCCEEEccCCc---CccccCccCccCCCCccEEEccCCccccccCcccc
Q 036342 5 EIGNLQ-NLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNS---LSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIF 80 (596)
Q Consensus 5 ~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 80 (596)
+|.+.+ .|+.+.+.. .++.+...+|.++.+|+.+.++.|. ++ .+...+|....+|+.+.+..+ ++.+...+|.
T Consensus 58 aF~~~~~~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~-~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVK-KIGRQAFMFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTTTCCSCCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCC-EECTTTTTTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred hccCCCCcCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeee-EechhhchhcccceeeccCCc-cceehhhhhh
Confidence 356664 599999964 5888888999999999999998874 54 577777877889999888766 5557778899
Q ss_pred CCCCCCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcc
Q 036342 81 NASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNL 160 (596)
Q Consensus 81 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l 160 (596)
+..+|+.+.+..+ +..+...+|.++.+|+.+.+..+ ++.+... +|.+ ..|+.+.+..+-.. + ....+...
T Consensus 135 ~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~-----aF~~-~~l~~i~ip~~~~~-i-~~~af~~c 204 (394)
T 4gt6_A 135 HCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEER-----AFTG-TALTQIHIPAKVTR-I-GTNAFSEC 204 (394)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTT-----TTTT-CCCSEEEECTTCCE-E-CTTTTTTC
T ss_pred hhcccccccccce-eeeecccceecccccccccccce-eeEeccc-----cccc-cceeEEEECCcccc-c-ccchhhhc
Confidence 9999999999754 55678888999999999999765 5554433 4554 57888888765432 2 22244444
Q ss_pred cccccEEEccccccccccChh-------------ccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCc
Q 036342 161 SRSLEEFYMYNCNISGGIPEE-------------ISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIP 227 (596)
Q Consensus 161 ~~~L~~L~l~~n~l~~~~~~~-------------~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 227 (596)
.++.......+......... +.....+..+.+. +.+..+...+|.++.+|+.+.+.++..+ .-.
T Consensus 205 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~ 281 (394)
T 4gt6_A 205 -FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGT 281 (394)
T ss_dssp -TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECT
T ss_pred -cccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecC
Confidence 45666665554443221111 1122344455443 3344456778999999999999877654 666
Q ss_pred cchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccc
Q 036342 228 DDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKV 306 (596)
Q Consensus 228 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~ 306 (596)
..|.++.+|+.+.+. +.++.+...+|.++.+|+.++|..+ ++.|.. +|.++.+|+.+.+..+ ++......|.++++
T Consensus 282 ~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~ 358 (394)
T 4gt6_A 282 GAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTA 358 (394)
T ss_dssp TTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTT
T ss_pred cccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCC
Confidence 788889999999996 5566677789999999999999764 777755 5778999999999654 77777889999999
Q ss_pred cceEecCCCcCcccCChhhhccCCCCCeEECCCCcc
Q 036342 307 LIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKL 342 (596)
Q Consensus 307 L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l 342 (596)
|+.+++.+|.... ..+.....|+.+.+..|.+
T Consensus 359 L~~i~~~~~~~~~----~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 359 LNNIEYSGSRSQW----NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCEEEESSCHHHH----HTCBCCCCC----------
T ss_pred CCEEEECCceeeh----hhhhccCCCCEEEeCCCCE
Confidence 9999999886541 2345667788888776654
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.41 E-value=2.7e-14 Score=146.94 Aligned_cols=15 Identities=20% Similarity=0.162 Sum_probs=7.3
Q ss_pred ccccceEecCCCcCc
Q 036342 304 LKVLIGIDFSMNNFS 318 (596)
Q Consensus 304 l~~L~~L~ls~N~~~ 318 (596)
.+.|++|||++|.|+
T Consensus 238 ~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 238 HPSLELLHLYFNELS 252 (372)
T ss_dssp CSSCCEEECTTSSCC
T ss_pred CCCCCEEeccCCCCC
Confidence 344555555555544
No 403
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.39 E-value=4.4e-14 Score=143.71 Aligned_cols=119 Identities=13% Similarity=0.103 Sum_probs=85.7
Q ss_pred ccccccccCCCceeehhhH---------H-------------------------hHHHHHHHHhhcCCCccceeeeeecc
Q 036342 447 FSENNLIGRGGFALFIRAF---------K-------------------------SFDVECEMMKSIRHRNLIKVISSCSN 492 (596)
Q Consensus 447 ~~~~~~ig~G~~g~v~~~~---------~-------------------------~~~~e~~~l~~l~H~niv~l~~~~~~ 492 (596)
|++.+.||+|+||.||+|. | ....++.+.....|+|+++++.....
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 8899999999999999852 0 11223333334455666555443322
Q ss_pred CC------eeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCC----
Q 036342 493 EE------FKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNM---- 562 (596)
Q Consensus 493 ~~------~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~---- 562 (596)
-. ..++||||++|+++.+.... .....+..|++.++.||| ..+|||||+||.|||+++++
T Consensus 177 vp~p~~~~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 177 VPEPIAQSRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp CCCEEEEETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSSC
T ss_pred CCeeeeccCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCccc
Confidence 11 23699999999888665321 123457899999999999 88999999999999998776
Q ss_pred ------cEEEecccccccc
Q 036342 563 ------VAHLSDFSIAKLL 575 (596)
Q Consensus 563 ------~~kl~dfGla~~~ 575 (596)
.+.|+||+.+...
T Consensus 247 ~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp TTSEEEEEEECCCTTCEET
T ss_pred ccccccceEEEEeCCcccC
Confidence 3899999987754
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=2.5e-12 Score=131.28 Aligned_cols=105 Identities=23% Similarity=0.195 Sum_probs=81.3
Q ss_pred CEEEccCC-cccCCCCccccCCCCCCeEEccC-CcccccCccchhcCCCCcEEEccCCcCcccchhhhccCCCCcEEEeC
Q 036342 189 VEIDLGGN-KLNGSIPITLGKLRKLQRLNLED-NILEGSIPDDICRLAELYRLELGSNKLYGSIPACFGNLASLRILSLG 266 (596)
Q Consensus 189 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 266 (596)
..++++++ .++. +|. +..+++|++|+|++ |.|++..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34688887 7875 555 88888888888885 88887777778888888888888888888888888888888888888
Q ss_pred CCcccCCCcccccccccceEEcccCCCCC
Q 036342 267 SNKLTSIPLTFWNLKDILQLNFSSNFLTG 295 (596)
Q Consensus 267 ~N~l~~ip~~~~~l~~L~~L~ls~N~l~~ 295 (596)
+|+|+.+|...+....|+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccC
Confidence 88888877665443347777777777653
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=4.6e-12 Score=129.32 Aligned_cols=102 Identities=24% Similarity=0.255 Sum_probs=55.2
Q ss_pred EEccCC-cCccccCccCccCCCCccEEEccC-CccccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 39 LGLQNN-SLSGSLSSIANVRLPNLEKLYLWG-NNFSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 39 L~Ls~N-~l~~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
++++++ .|++ +|. +..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|+++.|++|.+|++|++|+|++
T Consensus 13 v~~~~~n~l~~-ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH--LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp EECCSSCCCTT-TTT--SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEcCCCCCCCc-cCC--CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 455554 5542 333 22355555555553 555555555555566666666666666655555566666666666666
Q ss_pred CcCcCCCCCccccccCCCCCCCCEEECcCCCCC
Q 036342 117 NYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLD 149 (596)
Q Consensus 117 N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~ 149 (596)
|+|+++++. .|..++ |+.|+|.+|.+.
T Consensus 90 N~l~~~~~~-----~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWK-----TVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCST-----TTCSCC-CCEEECCSSCCC
T ss_pred CccceeCHH-----HcccCC-ceEEEeeCCCcc
Confidence 666555443 233333 666666666654
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.19 E-value=1.7e-09 Score=111.71 Aligned_cols=300 Identities=9% Similarity=0.057 Sum_probs=159.3
Q ss_pred CCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCCCC
Q 036342 7 GNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASKLS 86 (596)
Q Consensus 7 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 86 (596)
....+|+.+.+. ..++.+...+|.++.+|+.++|..+ ++ .+...+|... +|+.+.+..+ ++.+...+|.+ .+|+
T Consensus 43 ~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 43 KDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred ccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 344566666664 3456566666777777777777543 44 4556555543 5666666543 44344444444 4677
Q ss_pred EEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCccccccCCCCCCCCEEECcCCCCCccCCchhhhcccccccE
Q 036342 87 KLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLDGILPKTSISNLSRSLEE 166 (596)
Q Consensus 87 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~~~l~~~L~~ 166 (596)
.+.+..+ ++.+...+|.+. +|+.+.+..+ ++.+... .|.++..++...+..+..........
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~-----~f~~~~~l~~~~~~~~~~~~~~~~~~---------- 178 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDG-----IGYKAENLEKIEVSSNNKNYVAENYV---------- 178 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSC-----TTTTCTTCCEEEECTTCSSEEEETTE----------
T ss_pred cccCCCc-cccccccccccc-eeeeeeccce-eeccccc-----hhcccccccccccccccceeecccce----------
Confidence 7776644 333445555543 4555544432 2222222 46666677766665544321110000
Q ss_pred EEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCcEEEccCCcC
Q 036342 167 FYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELYRLELGSNKL 246 (596)
Q Consensus 167 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 246 (596)
....+ ......+.....+..+.+..+.- ......+....+|+.+.+..+ +.......|.++..|+.+.+..+ +
T Consensus 179 -~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v 251 (379)
T 4h09_A 179 -LYNKN---KTILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-V 251 (379)
T ss_dssp -EEETT---SSEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-C
T ss_pred -ecccc---cceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-c
Confidence 00000 01112233344445544433322 234445555666666666544 23244445566666666666554 4
Q ss_pred cccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCcCcccCChhh
Q 036342 247 YGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNNFSGVIPREI 325 (596)
Q Consensus 247 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~~~~~~~~~~ 325 (596)
+.+...+|.++.+|+.+.+..+ ++.++. .|..+.+|+.+.+.++.++......|.++.+|+.+++..+ ++ .|...+
T Consensus 252 ~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~a 328 (379)
T 4h09_A 252 TSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYA 328 (379)
T ss_dssp CEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTT
T ss_pred cEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHH
Confidence 4445556666666666666433 444443 3556666777776666666666666777777777777544 44 455556
Q ss_pred hccCCCCCeEECCCC
Q 036342 326 GEKLSYLEDLNLSFN 340 (596)
Q Consensus 326 ~~~l~~L~~L~l~~N 340 (596)
|..+.+|+++.+..+
T Consensus 329 F~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 329 FKNCKALSTISYPKS 343 (379)
T ss_dssp TTTCTTCCCCCCCTT
T ss_pred hhCCCCCCEEEECCc
Confidence 667777777766443
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.15 E-value=4e-09 Score=108.85 Aligned_cols=284 Identities=12% Similarity=0.104 Sum_probs=163.5
Q ss_pred ccCCCCCCCEEECCCCCCccccchhhhCCCCCCEEEccCCcCccccCccCccCCCCccEEEccCCccccccCccccCCCC
Q 036342 5 EIGNLQNLEELQLGQNKLIGTVPAAIFNVSTLKFLGLQNNSLSGSLSSIANVRLPNLEKLYLWGNNFSGTIPRFIFNASK 84 (596)
Q Consensus 5 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 84 (596)
+|.++.+|+.++|.. .++.+...+|.+. +|+.+.+..+ ++ .+...+|.. .+|+.+++..+ ++.....+|.+ .+
T Consensus 64 aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~-~I~~~aF~~-~~L~~i~lp~~-~~~i~~~~F~~-~~ 136 (379)
T 4h09_A 64 NFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VK-KFGDYVFQG-TDLDDFEFPGA-TTEIGNYIFYN-SS 136 (379)
T ss_dssp TTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CC-EECTTTTTT-CCCSEEECCTT-CCEECTTTTTT-CC
T ss_pred HhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-ee-Eeccceecc-CCcccccCCCc-ccccccccccc-ce
Confidence 588999999999964 5887888899886 7888888755 54 577767754 58999999876 44355555655 46
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEecCCCcCcCCCCCc-------cccccCCCCCCCCEEECcCCCCCccCCchhh
Q 036342 85 LSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYLTSSTPEL-------SFLSSLSNCKSLTLIDLSNNPLDGILPKTSI 157 (596)
Q Consensus 85 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-------~~~~~~~~l~~L~~L~ls~N~l~~~~~~~~~ 157 (596)
|+.+.+.. .++.+...+|.+..+++.+.+..+......... .....+.....+..+.+....
T Consensus 137 l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 205 (379)
T 4h09_A 137 VKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTV---------- 205 (379)
T ss_dssp CCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTC----------
T ss_pred eeeeeccc-eeeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccce----------
Confidence 77777664 466677888999999999988765443211110 011123333333333332221
Q ss_pred hcccccccEEEccccccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCCcccccCccchhcCCCCc
Q 036342 158 SNLSRSLEEFYMYNCNISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNILEGSIPDDICRLAELY 237 (596)
Q Consensus 158 ~~l~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 237 (596)
......++....+|+.+.+..+ +..+...+|.++..|+.+.+..+ ++..-...|.++.+|+
T Consensus 206 -----------------~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~ 266 (379)
T 4h09_A 206 -----------------KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALK 266 (379)
T ss_dssp -----------------CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCC
T ss_pred -----------------eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhc
Confidence 1123344444455555555433 22234445555555555555544 3323344455555555
Q ss_pred EEEccCCcCcccchhhhccCCCCcEEEeCCCcccCCCc-ccccccccceEEcccCCCCCchhhhhccccccceEecCCCc
Q 036342 238 RLELGSNKLYGSIPACFGNLASLRILSLGSNKLTSIPL-TFWNLKDILQLNFSSNFLTGPLLLEIGNLKVLIGIDFSMNN 316 (596)
Q Consensus 238 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ip~-~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~~L~~L~ls~N~ 316 (596)
.+.+..+ +......+|.++++|+.+.+.++.++.|+. .|.++.+|+.+.|..+ ++......|.++++|+.+.+..+
T Consensus 267 ~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~- 343 (379)
T 4h09_A 267 TLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS- 343 (379)
T ss_dssp EEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-
T ss_pred ccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-
Confidence 5555433 333444455566666666666555555543 3555566666666433 54455556666666666666543
Q ss_pred CcccCChhhhccC
Q 036342 317 FSGVIPREIGEKL 329 (596)
Q Consensus 317 ~~~~~~~~~~~~l 329 (596)
++ .|...+|...
T Consensus 344 v~-~I~~~aF~~c 355 (379)
T 4h09_A 344 IT-LIESGAFEGS 355 (379)
T ss_dssp CC-EECTTTTTTS
T ss_pred cC-EEchhHhhCC
Confidence 43 3444455443
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=1.2e-09 Score=111.36 Aligned_cols=179 Identities=18% Similarity=0.197 Sum_probs=90.2
Q ss_pred CCCCEEECcCCCCCc-cCC------chhhhcccccccEEEccccccc---------cccChhccCCCCCCEEEccCCccc
Q 036342 136 KSLTLIDLSNNPLDG-ILP------KTSISNLSRSLEEFYMYNCNIS---------GGIPEEISNLTNLVEIDLGGNKLN 199 (596)
Q Consensus 136 ~~L~~L~ls~N~l~~-~~~------~~~~~~l~~~L~~L~l~~n~l~---------~~~~~~~~~l~~L~~L~Ls~N~l~ 199 (596)
..++.|.+..+...+ ... ......+ ++|+.|.+.++... +.+...+..+++|+.|+|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l-~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKF-AHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHH-TTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhc-chhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 356777777665442 100 0112334 46777777654321 123345566677777777766311
Q ss_pred CCCCccccCCCCCCeEEccCCcccccCccchh--cCCCCcEEEccC--CcCccc-----chhhh--ccCCCCcEEEeCCC
Q 036342 200 GSIPITLGKLRKLQRLNLEDNILEGSIPDDIC--RLAELYRLELGS--NKLYGS-----IPACF--GNLASLRILSLGSN 268 (596)
Q Consensus 200 ~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N 268 (596)
..+. + .+++|+.|++..+.+.......++ .+++|+.|+|+. |...+. +...+ ..+++|++|+|++|
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 1122 3 266777777777666533333333 467777777653 221111 00112 13566666666666
Q ss_pred cccC-CCccc---ccccccceEEcccCCCCCch----hhhhccccccceEecCCCcCc
Q 036342 269 KLTS-IPLTF---WNLKDILQLNFSSNFLTGPL----LLEIGNLKVLIGIDFSMNNFS 318 (596)
Q Consensus 269 ~l~~-ip~~~---~~l~~L~~L~ls~N~l~~~~----~~~~~~l~~L~~L~ls~N~~~ 318 (596)
.+.. .+..+ ..+++|++|+|+.|.++... +..+..++.|+.|++++|.++
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 6553 11111 13556666666666665432 222234556666666666554
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.92 E-value=7.2e-10 Score=112.98 Aligned_cols=82 Identities=20% Similarity=0.240 Sum_probs=53.3
Q ss_pred CCCCcEEEccCCcCcccchhhhc---cCCCCcEEEeCCCcccC-----CCcccccccccceEEcccCCCCCchhhhhcc-
Q 036342 233 LAELYRLELGSNKLYGSIPACFG---NLASLRILSLGSNKLTS-----IPLTFWNLKDILQLNFSSNFLTGPLLLEIGN- 303 (596)
Q Consensus 233 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~-----ip~~~~~l~~L~~L~ls~N~l~~~~~~~~~~- 303 (596)
+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+.. ++..+..+++|+.|++++|.++......+..
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~a 330 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKS 330 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHH
Confidence 56777777777777644433333 46778888888887765 3444456788888888888887554444433
Q ss_pred ccccceEecCCCc
Q 036342 304 LKVLIGIDFSMNN 316 (596)
Q Consensus 304 l~~L~~L~ls~N~ 316 (596)
+ ...+|++.|+
T Consensus 331 l--g~~~~~~~~~ 341 (362)
T 2ra8_A 331 L--PMKIDVSDSQ 341 (362)
T ss_dssp C--CSEEECCSBC
T ss_pred c--CCEEEecCCc
Confidence 2 3456777766
No 410
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.86 E-value=3.3e-09 Score=103.41 Aligned_cols=126 Identities=14% Similarity=0.073 Sum_probs=97.3
Q ss_pred hcccccccccccCCCceeehhhH-------------------HhHHHHHHHHhhcC-CCccceeeeeeccCCeeEEEEec
Q 036342 443 ATDEFSENNLIGRGGFALFIRAF-------------------KSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 443 ~~~~~~~~~~ig~G~~g~v~~~~-------------------~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~ 502 (596)
..+.|......+.|+.+.||+.. ..+.+|+.+++.+. |..++++++++...+..|+||||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~ 91 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSE 91 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEEC
T ss_pred HhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEe
Confidence 34567777777777778887631 24889999999885 67888999999888899999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc-----------------------------------------
Q 036342 503 MPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG----------------------------------------- 541 (596)
Q Consensus 503 ~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~----------------------------------------- 541 (596)
++|.++.+.... ..+...++.++++++..||..
T Consensus 92 i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (263)
T 3tm0_A 92 ADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFK 165 (263)
T ss_dssp CSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSS
T ss_pred cCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCC
Confidence 999998776311 122346788999999999951
Q ss_pred ---------------CCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 542 ---------------YSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 542 ---------------~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
....++|+|+++.||+++++..+.|.||+.+..
T Consensus 166 ~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 166 DPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred CHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766677999997753
No 411
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.61 E-value=2.6e-08 Score=96.74 Aligned_cols=100 Identities=16% Similarity=0.144 Sum_probs=75.8
Q ss_pred HhHHHHHHHHhhcCCCc--cceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccC-
Q 036342 466 KSFDVECEMMKSIRHRN--LIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY- 542 (596)
Q Consensus 466 ~~~~~e~~~l~~l~H~n--iv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~- 542 (596)
..+..|+.+++.+.+.+ +++++++...++..++||||++|.++. ... .+ ...++.++++.+..+|...
T Consensus 58 ~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~ 128 (264)
T 1nd4_A 58 NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDP 128 (264)
T ss_dssp SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCG
T ss_pred hhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCC
Confidence 35678999999987654 566888888877889999999998883 211 12 2246777888888888421
Q ss_pred ------------------------------------------------------CCceEeCCCCCCCeeeCCCCcEEEec
Q 036342 543 ------------------------------------------------------SALVIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 543 ------------------------------------------------------~~~i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
...++|+|++|.||++++++.+.|.|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD 208 (264)
T 1nd4_A 129 ATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFID 208 (264)
T ss_dssp GGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECC
T ss_pred CCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEc
Confidence 12399999999999998876778999
Q ss_pred cccccc
Q 036342 569 FSIAKL 574 (596)
Q Consensus 569 fGla~~ 574 (596)
||.+..
T Consensus 209 ~~~a~~ 214 (264)
T 1nd4_A 209 CGRLGV 214 (264)
T ss_dssp CTTCEE
T ss_pred chhccc
Confidence 998764
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.57 E-value=1.4e-08 Score=98.24 Aligned_cols=42 Identities=33% Similarity=0.561 Sum_probs=21.7
Q ss_pred cCCCCcEEEccCCcCcc--cchhhhccCCCCcEEEeCCCcccCC
Q 036342 232 RLAELYRLELGSNKLYG--SIPACFGNLASLRILSLGSNKLTSI 273 (596)
Q Consensus 232 ~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~i 273 (596)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|+++
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~ 211 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE 211 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc
Confidence 34555555555555554 2234444555555555555555543
No 413
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.56 E-value=1.2e-07 Score=96.83 Aligned_cols=106 Identities=14% Similarity=0.220 Sum_probs=83.4
Q ss_pred HhHHHHHHHHhhcC--CCccceeeeeeccC---CeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc
Q 036342 466 KSFDVECEMMKSIR--HRNLIKVISSCSNE---EFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF 540 (596)
Q Consensus 466 ~~~~~e~~~l~~l~--H~niv~l~~~~~~~---~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~ 540 (596)
..+.+|..+++.+. +..++++++++.+. +..|+||||++|..+.+.. ...++..++..++.++++++..||.
T Consensus 81 ~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 81 HAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp -CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence 46778999999987 45688999998776 4589999999998774321 1235677888899999999999995
Q ss_pred cC-------------------------------------------------------CCceEeCCCCCCCeeeCCCCc--
Q 036342 541 GY-------------------------------------------------------SALVIHCDLKPSNVLLDDNMV-- 563 (596)
Q Consensus 541 ~~-------------------------------------------------------~~~i~Hrdlk~~NILl~~~~~-- 563 (596)
.. ...++|+|+++.||+++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v 237 (359)
T 3dxp_A 158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV 237 (359)
T ss_dssp SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence 20 257999999999999997653
Q ss_pred EEEeccccccc
Q 036342 564 AHLSDFSIAKL 574 (596)
Q Consensus 564 ~kl~dfGla~~ 574 (596)
+.|.||+.+..
T Consensus 238 ~~viDwe~a~~ 248 (359)
T 3dxp_A 238 LAVLDWELSTL 248 (359)
T ss_dssp EEECCCTTCEE
T ss_pred EEEECcccccc
Confidence 68999998774
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.55 E-value=1.5e-08 Score=93.08 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=75.2
Q ss_pred chhhhCCCCCCEEEccCC-cCccc-cCc--cCccCCCCccEEEccCCccccc----cCccccCCCCCCEEEccCCccccc
Q 036342 27 PAAIFNVSTLKFLGLQNN-SLSGS-LSS--IANVRLPNLEKLYLWGNNFSGT----IPRFIFNASKLSKLSLGMNSFSGF 98 (596)
Q Consensus 27 ~~~~~~l~~L~~L~Ls~N-~l~~~-~~~--~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~i~~~ 98 (596)
...+...++|++|+|++| .+... ... ......++|++|+|++|.|... +...+...++|++|+|++|.|+..
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344556677777777777 66421 000 1112246777777777777532 233344556788888888888653
Q ss_pred ----CCccccCCCCCCEEec--CCCcCcCCCCCccccccCCCCCCCCEEECcCCCCC
Q 036342 99 ----IPSTFGNLRNLEQLGL--DENYLTSSTPELSFLSSLSNCKSLTLIDLSNNPLD 149 (596)
Q Consensus 99 ----~~~~~~~l~~L~~L~l--~~N~l~~~~~~~~~~~~~~~l~~L~~L~ls~N~l~ 149 (596)
+..++...++|++|+| ++|.++..... .+...+...++|++|+|++|.+.
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~-~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGNNVEM-EIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHH-HHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCHHHHH-HHHHHHHhCCCcCEEeccCCCCC
Confidence 3445666678888888 77877652111 12234566678899999988874
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.55 E-value=2.3e-08 Score=96.71 Aligned_cols=96 Identities=21% Similarity=0.246 Sum_probs=66.4
Q ss_pred EEccCCcCc---ccchhhhccCCCCcEEEeCCCcccCCC---cccccccccceEEcccCCCCCchhhhhcccc--ccceE
Q 036342 239 LELGSNKLY---GSIPACFGNLASLRILSLGSNKLTSIP---LTFWNLKDILQLNFSSNFLTGPLLLEIGNLK--VLIGI 310 (596)
Q Consensus 239 L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~ip---~~~~~l~~L~~L~ls~N~l~~~~~~~~~~l~--~L~~L 310 (596)
++++.|... +..+....++++|+.|+|++|+|++++ ..+..+++|+.|+|++|+|++. ..+..++ .|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 566666432 223333356889999999999998754 4556788888999999888875 2334444 78888
Q ss_pred ecCCCcCcccCCh------hhhccCCCCCeEE
Q 036342 311 DFSMNNFSGVIPR------EIGEKLSYLEDLN 336 (596)
Q Consensus 311 ~ls~N~~~~~~~~------~~~~~l~~L~~L~ 336 (596)
+|++|.+.+.+|. ..+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 8888888776652 2455677777776
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.55 E-value=3.6e-08 Score=90.55 Aligned_cols=45 Identities=11% Similarity=0.096 Sum_probs=24.2
Q ss_pred ChhccCCCCCCEEEccCC-cccCC----CCccccCCCCCCeEEccCCccc
Q 036342 179 PEEISNLTNLVEIDLGGN-KLNGS----IPITLGKLRKLQRLNLEDNILE 223 (596)
Q Consensus 179 ~~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 223 (596)
...+...++|++|+|++| .+... +...+...++|++|+|++|.|.
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 345555666777777776 66532 1223334455555555555554
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.08 E-value=9.5e-06 Score=81.26 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=87.9
Q ss_pred cccccccccCCCceeehhh--------------HHhHHHHHHHHhhcCC----CccceeeeeeccCCeeEEEEecCCCCC
Q 036342 446 EFSENNLIGRGGFALFIRA--------------FKSFDVECEMMKSIRH----RNLIKVISSCSNEEFKALVLEYMPHGS 507 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~--------------~~~~~~e~~~l~~l~H----~niv~l~~~~~~~~~~~lV~e~~~~g~ 507 (596)
.+...+.++.|....||+. ...+.+|..+++.+.+ ..+.+++++ +..|+||||++|.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~vg~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G~~ 113 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLCNEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKGER 113 (320)
T ss_dssp CCSCEEEEEECSSEEEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCCBC
T ss_pred ceEEEEeCCCCCCceEEEECCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCCcc
Confidence 4555677888888888762 2457889999988876 234555555 45689999999988
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccC---------------------------------------------
Q 036342 508 LEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGY--------------------------------------------- 542 (596)
Q Consensus 508 L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--------------------------------------------- 542 (596)
+.+.... .++..+...++.++++.+..||...
T Consensus 114 l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
T 3r70_A 114 ITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIE 190 (320)
T ss_dssp CCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred ccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHH
Confidence 8643221 2455566667777777777777321
Q ss_pred ---------------CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 ---------------SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ---------------~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|++|.||+++.+..+.|.||+.+..
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 191 TIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 23459999999999999876779999998764
No 418
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.00 E-value=1.6e-05 Score=78.93 Aligned_cols=122 Identities=20% Similarity=0.227 Sum_probs=85.2
Q ss_pred cccccCCCceeehhh--------------HHhHHHHHHHHhhcC-CC--ccceeeeeeccCC---eeEEEEecCCCCCHH
Q 036342 450 NNLIGRGGFALFIRA--------------FKSFDVECEMMKSIR-HR--NLIKVISSCSNEE---FKALVLEYMPHGSLE 509 (596)
Q Consensus 450 ~~~ig~G~~g~v~~~--------------~~~~~~e~~~l~~l~-H~--niv~l~~~~~~~~---~~~lV~e~~~~g~L~ 509 (596)
.+.++.|....||+. ...+.+|..+++.+. +. .+.+.+......+ ..|+||||++|.++.
T Consensus 25 i~~~~~G~~n~v~~v~~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~ 104 (304)
T 3sg8_A 25 IEISGEGNDCIAYEINRDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLT 104 (304)
T ss_dssp CCEEEECSSEEEEESTTSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECC
T ss_pred eEecCCCCcceEEEECCEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECC
Confidence 345667777777652 356789999998874 32 2455665554433 358999999998876
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc------------------------------------------------
Q 036342 510 KYLYSSNCILDIFQRLNIMIDVASALEYLHFG------------------------------------------------ 541 (596)
Q Consensus 510 ~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~------------------------------------------------ 541 (596)
+.... .++..++..++.++++.+..+|..
T Consensus 105 ~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 181 (304)
T 3sg8_A 105 PLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDIL 181 (304)
T ss_dssp HHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred ccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHH
Confidence 53322 245666677777787777777731
Q ss_pred -------CCCceEeCCCCCCCeeeCC--CCcEEEeccccccc
Q 036342 542 -------YSALVIHCDLKPSNVLLDD--NMVAHLSDFSIAKL 574 (596)
Q Consensus 542 -------~~~~i~Hrdlk~~NILl~~--~~~~kl~dfGla~~ 574 (596)
....++|+|+++.||++++ ...+.+.||+.+..
T Consensus 182 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 182 ENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp TCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred hccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1245899999999999988 56688999998765
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.83 E-value=9.8e-06 Score=72.64 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=35.2
Q ss_pred CCCEEEccCCcccCCCCccccCCCCCCeEEccCCc-ccccCccchhcC----CCCcEEEccCCc-CcccchhhhccCCCC
Q 036342 187 NLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDNI-LEGSIPDDICRL----AELYRLELGSNK-LYGSIPACFGNLASL 260 (596)
Q Consensus 187 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 260 (596)
+|+.||++++.++...-..+.++++|+.|+|++|. |+..--..+..+ ++|+.|+|++|. ++...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 44555555554443333334445555555555542 332111122221 235555555543 443333334444555
Q ss_pred cEEEeCCC
Q 036342 261 RILSLGSN 268 (596)
Q Consensus 261 ~~L~Ls~N 268 (596)
++|+|+++
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555443
No 420
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.79 E-value=6.4e-06 Score=73.83 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=55.8
Q ss_pred CCCCEEEccCCcCccc-cCccCccCCCCccEEEccCCc-cccccCccccCC----CCCCEEEccCC-cccccCCccccCC
Q 036342 34 STLKFLGLQNNSLSGS-LSSIANVRLPNLEKLYLWGNN-FSGTIPRFIFNA----SKLSKLSLGMN-SFSGFIPSTFGNL 106 (596)
Q Consensus 34 ~~L~~L~Ls~N~l~~~-~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N-~i~~~~~~~~~~l 106 (596)
-+|++|||+++.++.. +..+ ..+++|+.|+|++|. |+..--..+..+ ++|++|+|++| +|+...-..+..+
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L--~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~ 138 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHM--EGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHF 138 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGG--TTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGC
T ss_pred ceEeEEeCcCCCccHHHHHHh--cCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcC
Confidence 4678888888877521 2222 347788888888874 554333345554 36888888887 4776655667788
Q ss_pred CCCCEEecCCCc
Q 036342 107 RNLEQLGLDENY 118 (596)
Q Consensus 107 ~~L~~L~l~~N~ 118 (596)
++|++|+++++.
T Consensus 139 ~~L~~L~L~~c~ 150 (176)
T 3e4g_A 139 RNLKYLFLSDLP 150 (176)
T ss_dssp TTCCEEEEESCT
T ss_pred CCCCEEECCCCC
Confidence 888888888874
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.73 E-value=0.00011 Score=72.79 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=70.2
Q ss_pred HhHHHHHHHHhhcCCC---ccceeeeeec-cCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhc-
Q 036342 466 KSFDVECEMMKSIRHR---NLIKVISSCS-NEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHF- 540 (596)
Q Consensus 466 ~~~~~e~~~l~~l~H~---niv~l~~~~~-~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~- 540 (596)
..+.+|..+++.+.+. .+.+.+.++. ..+..|+||||++|..+.+.... .++..+...++.++++.+..||.
T Consensus 54 ~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~ 130 (306)
T 3tdw_A 54 DELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAF 130 (306)
T ss_dssp HHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcC
Confidence 5678999999999753 3667777664 45567899999999877653211 12233333334444444444431
Q ss_pred --------------------------------------------------------cCCCceEeCCCCCCCeeeCC---C
Q 036342 541 --------------------------------------------------------GYSALVIHCDLKPSNVLLDD---N 561 (596)
Q Consensus 541 --------------------------------------------------------~~~~~i~Hrdlk~~NILl~~---~ 561 (596)
.....++|+|+++.||+++. +
T Consensus 131 ~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~ 210 (306)
T 3tdw_A 131 PVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQ 210 (306)
T ss_dssp CHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSS
T ss_pred CcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCC
Confidence 12456799999999999987 3
Q ss_pred Cc-EEEeccccccc
Q 036342 562 MV-AHLSDFSIAKL 574 (596)
Q Consensus 562 ~~-~kl~dfGla~~ 574 (596)
+. +.|.||+.+..
T Consensus 211 ~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 211 TPLTGIIDFGDAAI 224 (306)
T ss_dssp CCEEEECCCTTCEE
T ss_pred CceEEEEehhhcCC
Confidence 55 58999998764
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.43 E-value=0.00046 Score=66.87 Aligned_cols=104 Identities=16% Similarity=0.094 Sum_probs=74.7
Q ss_pred HhHHHHHHHHhhcC-CCccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhcc---
Q 036342 466 KSFDVECEMMKSIR-HRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFG--- 541 (596)
Q Consensus 466 ~~~~~e~~~l~~l~-H~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--- 541 (596)
..+.+|..+++.+. +-.+.++++++.+.+..|+|||+++|.++.+...... .....++.++++.+..||..
T Consensus 64 ~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 64 NDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGG
T ss_pred hHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcc
Confidence 45778999888774 3347788999888889999999999988766543221 12233455566666666621
Q ss_pred ----------------------------------------------------CCCceEeCCCCCCCeeeCCCCcEEEecc
Q 036342 542 ----------------------------------------------------YSALVIHCDLKPSNVLLDDNMVAHLSDF 569 (596)
Q Consensus 542 ----------------------------------------------------~~~~i~Hrdlk~~NILl~~~~~~kl~df 569 (596)
....++|+|+.+.||++++++.+-|.||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 0113799999999999998877789999
Q ss_pred ccccc
Q 036342 570 SIAKL 574 (596)
Q Consensus 570 Gla~~ 574 (596)
+.+..
T Consensus 219 e~a~~ 223 (272)
T 4gkh_A 219 GRVGI 223 (272)
T ss_dssp TTCEE
T ss_pred ccccc
Confidence 98764
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.29 E-value=0.00014 Score=66.47 Aligned_cols=116 Identities=15% Similarity=0.164 Sum_probs=64.8
Q ss_pred hCCCCCCEEEccCC-cCccc----c-CccCccCCCCccEEEccCCccccccC----ccccCCCCCCEEEccCCcccccCC
Q 036342 31 FNVSTLKFLGLQNN-SLSGS----L-SSIANVRLPNLEKLYLWGNNFSGTIP----RFIFNASKLSKLSLGMNSFSGFIP 100 (596)
Q Consensus 31 ~~l~~L~~L~Ls~N-~l~~~----~-~~~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~~~ 100 (596)
..-++|++|+|++| .|... + ..+. .-..|+.|+|++|.|...-- .++..-+.|++|+|++|+|....-
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~--~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAAC--NSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHT--TCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHh--hCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 34566777777764 55310 0 0111 23467777777777763222 223345678888888888865322
Q ss_pred ----ccccCCCCCCEEecCCCcCcCCCCC--ccccccCCCCCCCCEEECcCCCC
Q 036342 101 ----STFGNLRNLEQLGLDENYLTSSTPE--LSFLSSLSNCKSLTLIDLSNNPL 148 (596)
Q Consensus 101 ----~~~~~l~~L~~L~l~~N~l~~~~~~--~~~~~~~~~l~~L~~L~ls~N~l 148 (596)
.++..-+.|++|+|++|....+... ..+...+..-++|+.|+++.|.+
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 2344456688888876533111111 11233456667888888887764
No 424
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.26 E-value=0.00038 Score=70.77 Aligned_cols=125 Identities=10% Similarity=0.079 Sum_probs=74.5
Q ss_pred cccccCCCceeehhh--------------HHhHHHHHHHHhhcCCCc--cceeeeeeccC-CeeEEEEecCCCCCHHHH-
Q 036342 450 NNLIGRGGFALFIRA--------------FKSFDVECEMMKSIRHRN--LIKVISSCSNE-EFKALVLEYMPHGSLEKY- 511 (596)
Q Consensus 450 ~~~ig~G~~g~v~~~--------------~~~~~~e~~~l~~l~H~n--iv~l~~~~~~~-~~~~lV~e~~~~g~L~~~- 511 (596)
.+.++.|....+|+. ...+..|+.+++.+.... +.++++++... +..|+||||++|..+.+.
T Consensus 46 i~~l~gG~~n~~y~v~~~g~~~vlK~~~~~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~l~~l~ 125 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDVGGRGYVLRVNSCADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVTLQDLP 125 (362)
T ss_dssp EEEEEECSSEEEEEEEETTEEEEEEEESCCHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEETTTSC
T ss_pred EEECCCCCcceEEEEEECCcEEEEEeCCchhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCCcccCC
Confidence 455666666666652 135788999999887543 56777776654 668999999997554311
Q ss_pred -----------------HhhCC-C---C------------CCHHHH---------------------HHHHHHHHHHHHH
Q 036342 512 -----------------LYSSN-C---I------------LDIFQR---------------------LNIMIDVASALEY 537 (596)
Q Consensus 512 -----------------l~~~~-~---~------------l~~~~~---------------------~~i~~~i~~~l~~ 537 (596)
++... . . -.|... ......+.....+
T Consensus 126 ~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 205 (362)
T 3ovc_A 126 ETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALDELMLW 205 (362)
T ss_dssp GGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHHHHHHH
Confidence 11110 0 0 001111 0011112222223
Q ss_pred Hhc-cCCCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 538 LHF-GYSALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 538 lh~-~~~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
+.. ...+.++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 206 AEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp GGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 321 1125789999999999998877888999998764
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.13 E-value=0.00044 Score=63.05 Aligned_cols=67 Identities=16% Similarity=0.199 Sum_probs=32.2
Q ss_pred hccCCCCCCEEEccCC-cccCC----CCccccCCCCCCeEEccCCcccccCc----cchhcCCCCcEEEccCCcCc
Q 036342 181 EISNLTNLVEIDLGGN-KLNGS----IPITLGKLRKLQRLNLEDNILEGSIP----DDICRLAELYRLELGSNKLY 247 (596)
Q Consensus 181 ~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l~ 247 (596)
.+.+-+.|+.|+|++| .|... +..++..-+.|+.|+|++|.|...-- ..+..-+.|+.|+|++|.|.
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3344466777777764 55421 22334444556666666665542211 12223344555555555554
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.01 E-value=0.00097 Score=56.70 Aligned_cols=37 Identities=19% Similarity=0.269 Sum_probs=17.5
Q ss_pred cceEecCCCcCcccCChhhhccCCCCCeEECCCCcccc
Q 036342 307 LIGIDFSMNNFSGVIPREIGEKLSYLEDLNLSFNKLKG 344 (596)
Q Consensus 307 L~~L~ls~N~~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 344 (596)
|+.|||++|+|+ .+|...+..+++|+.|+|++|++.+
T Consensus 33 l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 33 TTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp CSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CCEEECCCCcCC-ccChhhhhhccccCEEEecCCCeec
Confidence 334444444444 3344444445555555555555543
No 427
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.01 E-value=0.00091 Score=67.71 Aligned_cols=44 Identities=9% Similarity=0.085 Sum_probs=32.6
Q ss_pred HhHHHHHHHHhhcCC---CccceeeeeeccC---CeeEEEEecCCCCCHH
Q 036342 466 KSFDVECEMMKSIRH---RNLIKVISSCSNE---EFKALVLEYMPHGSLE 509 (596)
Q Consensus 466 ~~~~~e~~~l~~l~H---~niv~l~~~~~~~---~~~~lV~e~~~~g~L~ 509 (596)
..+.+|..+++.+.. -.+.++++++.+. +..|+||||++|..+.
T Consensus 72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence 356788888888753 3577888887665 3568999999986654
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.96 E-value=0.0012 Score=56.25 Aligned_cols=35 Identities=23% Similarity=0.279 Sum_probs=16.0
Q ss_pred CCEEEccCCcccccCCccccCCCCCCEEecCCCcC
Q 036342 85 LSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDENYL 119 (596)
Q Consensus 85 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~N~l 119 (596)
|++|+|++|+|+.+.++.|..+++|+.|+|++|.+
T Consensus 33 l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 33 TTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp CSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 44444444444444444444444444444444444
No 429
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.80 E-value=0.0034 Score=61.42 Aligned_cols=57 Identities=12% Similarity=0.030 Sum_probs=44.2
Q ss_pred cccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCCC---ccceeeeeeccCCeeEEEEecCC
Q 036342 448 SENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRHR---NLIKVISSCSNEEFKALVLEYMP 504 (596)
Q Consensus 448 ~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H~---niv~l~~~~~~~~~~~lV~e~~~ 504 (596)
...+.||.|.++.||+.. ..+.+|+..++.+++. .+++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 445678888888888731 3578999999999876 578888763 3689999999
Q ss_pred CCCH
Q 036342 505 HGSL 508 (596)
Q Consensus 505 ~g~L 508 (596)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 9864
No 430
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=96.36 E-value=0.0046 Score=61.85 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=28.6
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+++.++.+.+.||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 57899999999999998888999999998753
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=95.95 E-value=0.015 Score=57.42 Aligned_cols=104 Identities=13% Similarity=0.120 Sum_probs=66.6
Q ss_pred HhHHHHHHHHhhcC---CCccceeeeeeccCCeeEEEEecCCCCCHH--------H---HHhhCCC--------------
Q 036342 466 KSFDVECEMMKSIR---HRNLIKVISSCSNEEFKALVLEYMPHGSLE--------K---YLYSSNC-------------- 517 (596)
Q Consensus 466 ~~~~~e~~~l~~l~---H~niv~l~~~~~~~~~~~lV~e~~~~g~L~--------~---~l~~~~~-------------- 517 (596)
..+..|...|+.+. ...+++.++++..++..++||||+++..+. + .++....
T Consensus 73 ~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~ 152 (312)
T 3jr1_A 73 SMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGP 152 (312)
T ss_dssp HHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETT
T ss_pred HHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCC
Confidence 45788988888874 367889999888788899999999987541 1 1221110
Q ss_pred -------CCCHHHHH---HHHHH----------------HHH-HHHHHh-ccCCCceEeCCCCCCCeeeCCCCcEEEecc
Q 036342 518 -------ILDIFQRL---NIMID----------------VAS-ALEYLH-FGYSALVIHCDLKPSNVLLDDNMVAHLSDF 569 (596)
Q Consensus 518 -------~l~~~~~~---~i~~~----------------i~~-~l~~lh-~~~~~~i~Hrdlk~~NILl~~~~~~kl~df 569 (596)
.-+|.... ++..+ +.. ....+. ....+.++|+|+.+.|++++.++ +.|.|+
T Consensus 153 ~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~ 231 (312)
T 3jr1_A 153 IYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNP 231 (312)
T ss_dssp EEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSC
T ss_pred cCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcC
Confidence 01354322 11111 111 112332 12357899999999999999887 889998
Q ss_pred c
Q 036342 570 S 570 (596)
Q Consensus 570 G 570 (596)
.
T Consensus 232 ~ 232 (312)
T 3jr1_A 232 A 232 (312)
T ss_dssp C
T ss_pred c
Confidence 4
No 432
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=95.94 E-value=0.019 Score=58.90 Aligned_cols=31 Identities=19% Similarity=0.314 Sum_probs=26.4
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+++.+ .+++.||..+..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 5689999999999999876 488999987663
No 433
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=94.45 E-value=0.088 Score=52.27 Aligned_cols=32 Identities=28% Similarity=0.368 Sum_probs=27.9
Q ss_pred CCceEeCCCCCCCeeeCCC----CcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDN----MVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~----~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+++.+ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 5689999999999999874 6889999998764
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=94.11 E-value=0.097 Score=51.16 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=25.7
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+ .+++.+.+.||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 456899999999999 5566789999987764
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=90.99 E-value=0.15 Score=52.74 Aligned_cols=38 Identities=21% Similarity=0.317 Sum_probs=25.6
Q ss_pred HhHHHHHHHHhhcCCCcc-ceeeeeeccCCeeEEEEecCCCCC
Q 036342 466 KSFDVECEMMKSIRHRNL-IKVISSCSNEEFKALVLEYMPHGS 507 (596)
Q Consensus 466 ~~~~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~~~g~ 507 (596)
..+..|..+++.+...++ +++++.+.. .+|+||++|..
T Consensus 120 ~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~ 158 (429)
T 1nw1_A 120 SHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRP 158 (429)
T ss_dssp HHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEE
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCcc
Confidence 455578888887754334 677776643 38999998633
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=90.54 E-value=0.41 Score=49.78 Aligned_cols=35 Identities=17% Similarity=0.207 Sum_probs=25.0
Q ss_pred HHHHHHHhhcCCCcc-ceeeeeeccCCeeEEEEecCCCCC
Q 036342 469 DVECEMMKSIRHRNL-IKVISSCSNEEFKALVLEYMPHGS 507 (596)
Q Consensus 469 ~~e~~~l~~l~H~ni-v~l~~~~~~~~~~~lV~e~~~~g~ 507 (596)
.+|..+++.+...++ +++++.+.. .+||||++|..
T Consensus 152 ~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 152 EREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp HHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 588888888865444 577777732 25999998743
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=90.16 E-value=0.53 Score=47.54 Aligned_cols=106 Identities=15% Similarity=0.164 Sum_probs=63.6
Q ss_pred HHhHHHHHHHHhhcCCC-ccceeeeeeccCCeeEEEEecCCCCCHHH--------------H---HhhCC----CCCC--
Q 036342 465 FKSFDVECEMMKSIRHR-NLIKVISSCSNEEFKALVLEYMPHGSLEK--------------Y---LYSSN----CILD-- 520 (596)
Q Consensus 465 ~~~~~~e~~~l~~l~H~-niv~l~~~~~~~~~~~lV~e~~~~g~L~~--------------~---l~~~~----~~l~-- 520 (596)
.....+|..+++.+.-. -..++++++.. .+||||++|..+.. . ++... ....
T Consensus 97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l 172 (379)
T 3feg_A 97 VDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL 172 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence 35566898888877422 23667777654 29999998754421 0 11111 1112
Q ss_pred HHHHHHHHHHHHH-------------------HHHHHh-----ccCCCceEeCCCCCCCeeeCCC----CcEEEeccccc
Q 036342 521 IFQRLNIMIDVAS-------------------ALEYLH-----FGYSALVIHCDLKPSNVLLDDN----MVAHLSDFSIA 572 (596)
Q Consensus 521 ~~~~~~i~~~i~~-------------------~l~~lh-----~~~~~~i~Hrdlk~~NILl~~~----~~~kl~dfGla 572 (596)
|.+..++..++.. .+.++. ......++|+|+.+.||+++.+ +.+.+.||..|
T Consensus 173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 3344444433321 223332 1234579999999999999876 78999999877
Q ss_pred cc
Q 036342 573 KL 574 (596)
Q Consensus 573 ~~ 574 (596)
..
T Consensus 253 ~~ 254 (379)
T 3feg_A 253 SY 254 (379)
T ss_dssp EE
T ss_pred Cc
Confidence 63
No 438
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=89.92 E-value=0.45 Score=45.94 Aligned_cols=58 Identities=14% Similarity=0.064 Sum_probs=39.0
Q ss_pred cccccccccCCCceeehhhH--------------------HhHHHHHHHHhhcCC---CccceeeeeeccCCeeEEEEec
Q 036342 446 EFSENNLIGRGGFALFIRAF--------------------KSFDVECEMMKSIRH---RNLIKVISSCSNEEFKALVLEY 502 (596)
Q Consensus 446 ~~~~~~~ig~G~~g~v~~~~--------------------~~~~~e~~~l~~l~H---~niv~l~~~~~~~~~~~lV~e~ 502 (596)
.....+.+|.|..+.|||.. ..+.+|+..|+.+.- -.+++.+++. .-++||||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34556777888888888731 247889999988742 2345555542 24799999
Q ss_pred CCCCC
Q 036342 503 MPHGS 507 (596)
Q Consensus 503 ~~~g~ 507 (596)
++++.
T Consensus 92 l~~~~ 96 (288)
T 3f7w_A 92 VDERP 96 (288)
T ss_dssp CCCCC
T ss_pred ecccC
Confidence 98764
No 439
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.04 E-value=0.7 Score=46.98 Aligned_cols=33 Identities=24% Similarity=0.321 Sum_probs=27.8
Q ss_pred CCCceEeCCCCCCCeeeCCC------CcEEEeccccccc
Q 036342 542 YSALVIHCDLKPSNVLLDDN------MVAHLSDFSIAKL 574 (596)
Q Consensus 542 ~~~~i~Hrdlk~~NILl~~~------~~~kl~dfGla~~ 574 (596)
....++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 242 ~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 242 SPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 35578999999999999876 7899999987653
No 440
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=85.88 E-value=0.75 Score=47.18 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=27.8
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+++.||+++.++ +++.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 78899999999999998876 99999988764
No 441
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=83.98 E-value=0.66 Score=30.37 Aligned_cols=12 Identities=33% Similarity=0.379 Sum_probs=5.5
Q ss_pred HHhhhhhhccCC
Q 036342 407 IWLILRYRQRGK 418 (596)
Q Consensus 407 i~~~~~~rr~~k 418 (596)
+|+++|+|+.++
T Consensus 31 ~~~~~RRr~~~~ 42 (44)
T 2ks1_B 31 IGLFMRRRHIVR 42 (44)
T ss_dssp HHHHHHTTTCCS
T ss_pred HHHHhhhhHhhc
Confidence 344455444443
No 442
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=81.35 E-value=0.6 Score=30.46 Aligned_cols=10 Identities=10% Similarity=0.248 Sum_probs=5.1
Q ss_pred ceeeeehhhh
Q 036342 390 LLLGIVLPLS 399 (596)
Q Consensus 390 ~~~~i~~~~~ 399 (596)
.+.++++++.
T Consensus 13 ~Ia~~vVGvl 22 (44)
T 2jwa_A 13 SIISAVVGIL 22 (44)
T ss_dssp HHHHHHHHHH
T ss_pred chHHHHHHHH
Confidence 3555556633
No 443
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=80.69 E-value=0.88 Score=29.72 Aligned_cols=13 Identities=23% Similarity=0.232 Sum_probs=6.0
Q ss_pred HHhhhhhhccCCC
Q 036342 407 IWLILRYRQRGKK 419 (596)
Q Consensus 407 i~~~~~~rr~~k~ 419 (596)
+|+++|+|+.+++
T Consensus 30 ~~~~~RRRr~~~k 42 (44)
T 2l2t_A 30 FAVYVRRKSIKKK 42 (44)
T ss_dssp HHHHHHTTCSSCC
T ss_pred HHHHhhhhhhhhc
Confidence 3445554444443
No 444
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=76.66 E-value=0.83 Score=46.53 Aligned_cols=30 Identities=27% Similarity=0.422 Sum_probs=24.7
Q ss_pred ceEeCCCCCCCeee------CCCCcEEEeccccccc
Q 036342 545 LVIHCDLKPSNVLL------DDNMVAHLSDFSIAKL 574 (596)
Q Consensus 545 ~i~Hrdlk~~NILl------~~~~~~kl~dfGla~~ 574 (596)
.++|+|+.+.||++ +++..+++.||-.|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567899999987663
No 445
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=76.45 E-value=0.79 Score=44.86 Aligned_cols=32 Identities=38% Similarity=0.382 Sum_probs=27.0
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+++++..+.+.||+.+..
T Consensus 186 ~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 186 PAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp CEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 45799999999999999876668999987653
No 446
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=71.81 E-value=3.9 Score=39.91 Aligned_cols=30 Identities=23% Similarity=0.326 Sum_probs=25.8
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+++.||+++ + .+.+.||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 56789999999999999 4 899999987653
No 447
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=68.71 E-value=8.7 Score=34.96 Aligned_cols=87 Identities=6% Similarity=0.054 Sum_probs=61.2
Q ss_pred CCCccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeee
Q 036342 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLL 558 (596)
Q Consensus 479 ~H~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl 558 (596)
.||+++.. ..-..++.+.+.++.-+.+-=+..++ ..+...+++++..|+....+++ .-+|--+.|+||++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEE
Confidence 57888866 45556666666665544322222232 3567888999999988776555 24678899999999
Q ss_pred CCCCcEEEecccccccc
Q 036342 559 DDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 559 ~~~~~~kl~dfGla~~~ 575 (596)
+.++.+++.-.|+...+
T Consensus 113 ~~~~~p~i~~RGik~~l 129 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV 129 (215)
T ss_dssp CTTSCEEESCCEETTTB
T ss_pred cCCCCEEEEEccCccCC
Confidence 99999999999985544
No 448
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=66.75 E-value=4.6 Score=40.22 Aligned_cols=30 Identities=23% Similarity=0.422 Sum_probs=24.7
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEecccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAK 573 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~ 573 (596)
...++|+|+.+.||+++++. +.++||..+.
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 45789999999999998655 8999998665
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.08 E-value=21 Score=32.53 Aligned_cols=86 Identities=10% Similarity=0.069 Sum_probs=60.4
Q ss_pred CCCccceeeeeeccCCeeEEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHH-HHhccCCCceEeCCCCCCCee
Q 036342 479 RHRNLIKVISSCSNEEFKALVLEYMPHGSLEKYLYSSNCILDIFQRLNIMIDVASALE-YLHFGYSALVIHCDLKPSNVL 557 (596)
Q Consensus 479 ~H~niv~l~~~~~~~~~~~lV~e~~~~g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~-~lh~~~~~~i~Hrdlk~~NIL 557 (596)
.||.+ -...-.+++.+.+.++.-+++.=...++ ..+...+++++..++.... +++ .-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57777 2333356677777777654443333443 3567888888888877665 443 4577889999999
Q ss_pred eCCCCcEEEecccccccc
Q 036342 558 LDDNMVAHLSDFSIAKLL 575 (596)
Q Consensus 558 l~~~~~~kl~dfGla~~~ 575 (596)
++.++.+++.-.|+-..+
T Consensus 117 f~~~~~p~i~hRGi~~~l 134 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL 134 (219)
T ss_dssp ECTTCCEEESCCEETTTB
T ss_pred EeCCCcEEEEEcCCcccC
Confidence 999999999999985544
No 450
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=61.78 E-value=2.7 Score=41.49 Aligned_cols=32 Identities=22% Similarity=0.371 Sum_probs=28.0
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||++++++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45799999999999999888899999987664
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=56.08 E-value=11 Score=29.49 Aligned_cols=45 Identities=16% Similarity=0.197 Sum_probs=21.3
Q ss_pred cccccCccccCCCCCCEEEccCCcccccCCccccCCCCCCEEecCC
Q 036342 71 FSGTIPRFIFNASKLSKLSLGMNSFSGFIPSTFGNLRNLEQLGLDE 116 (596)
Q Consensus 71 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 116 (596)
++.+...+|.+.++|+.+.+-.+ ++.+...+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33344444555555555555432 3334444555555555555443
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=55.21 E-value=27 Score=27.26 Aligned_cols=47 Identities=17% Similarity=0.090 Sum_probs=33.9
Q ss_pred ccccccChhccCCCCCCEEEccCCcccCCCCccccCCCCCCeEEccCC
Q 036342 173 NISGGIPEEISNLTNLVEIDLGGNKLNGSIPITLGKLRKLQRLNLEDN 220 (596)
Q Consensus 173 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 220 (596)
.++.+-..+|.++++|+.+.+..+ ++.+...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 455566678888888888887765 34466777888888888887764
No 453
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=37.43 E-value=13 Score=37.79 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=26.6
Q ss_pred CCceEeCCCCCCCeeeCCCCcEEEeccccccc
Q 036342 543 SALVIHCDLKPSNVLLDDNMVAHLSDFSIAKL 574 (596)
Q Consensus 543 ~~~i~Hrdlk~~NILl~~~~~~kl~dfGla~~ 574 (596)
...++|+|+.+.||+ ++++.+.+.||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 456899999999999 7788999999987763
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=36.28 E-value=13 Score=23.44 Aligned_cols=14 Identities=7% Similarity=0.145 Sum_probs=7.3
Q ss_pred ceeeeehhhhhhHH
Q 036342 390 LLLGIVLPLSTTLL 403 (596)
Q Consensus 390 ~~~~i~~~~~~~~l 403 (596)
.+.+++++.++.+.
T Consensus 12 aIAGiVvG~v~gv~ 25 (38)
T 2k1k_A 12 EIVAVIFGLLLGAA 25 (38)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHH
Confidence 45566666554433
No 455
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=28.04 E-value=89 Score=28.45 Aligned_cols=61 Identities=15% Similarity=-0.011 Sum_probs=45.6
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHhccCCCceEeCCCCCCCeeeCCCCcEEEec
Q 036342 506 GSLEKYLYSSNCILDIFQRLNIMIDVASALEYLHFGYSALVIHCDLKPSNVLLDDNMVAHLSD 568 (596)
Q Consensus 506 g~L~~~l~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~~~i~Hrdlk~~NILl~~~~~~kl~d 568 (596)
-+|.+.+...+.++.+.++|.++.|.++++.-.-.. ..-..+=.-|..|++..+|.+...+
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc
Confidence 379999998888999999999999999998776211 1111233346889999999887764
No 456
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=24.76 E-value=19 Score=37.18 Aligned_cols=25 Identities=8% Similarity=-0.053 Sum_probs=6.2
Q ss_pred hHHHHHHHHhhcCCCccceeeeeec
Q 036342 467 SFDVECEMMKSIRHRNLIKVISSCS 491 (596)
Q Consensus 467 ~~~~e~~~l~~l~H~niv~l~~~~~ 491 (596)
.+.+|+.+++..+|||+++.+++..
T Consensus 190 ~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 190 SLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp -----------------CBCCCEEE
T ss_pred cccccccccccccccccCCCcceEE
Confidence 3556777888889999999988763
Done!