Query 036343
Match_columns 795
No_of_seqs 322 out of 1670
Neff 6.1
Searched_HMMs 46136
Date Fri Mar 29 11:43:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036343.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036343hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03059 beta-galactosidase; P 100.0 2E-210 5E-215 1814.9 73.0 758 19-795 20-839 (840)
2 KOG0496 Beta-galactosidase [Ca 100.0 1E-148 2E-153 1252.0 44.0 597 26-711 17-648 (649)
3 PF01301 Glyco_hydro_35: Glyco 100.0 4.3E-89 9.3E-94 742.4 22.8 286 35-330 1-318 (319)
4 COG1874 LacA Beta-galactosidas 100.0 4.4E-39 9.4E-44 373.0 12.0 279 29-316 1-332 (673)
5 PF02449 Glyco_hydro_42: Beta- 99.9 4.7E-22 1E-26 221.8 15.3 254 50-333 2-373 (374)
6 PF02140 Gal_Lectin: Galactose 99.7 8.3E-19 1.8E-23 153.9 4.4 75 717-795 1-80 (80)
7 KOG4729 Galactoside-binding le 99.7 4E-18 8.6E-23 175.5 7.4 86 707-795 38-129 (265)
8 PF02836 Glyco_hydro_2_C: Glyc 99.0 2.5E-09 5.5E-14 116.0 15.2 149 29-219 1-155 (298)
9 PRK10150 beta-D-glucuronidase; 98.9 1.6E-07 3.4E-12 111.8 25.1 157 27-219 276-446 (604)
10 PF00150 Cellulase: Cellulase 98.9 2.6E-08 5.6E-13 105.6 14.6 159 39-220 4-170 (281)
11 PF13364 BetaGal_dom4_5: Beta- 98.9 6.3E-09 1.4E-13 97.2 7.8 72 589-689 34-109 (111)
12 PRK10340 ebgA cryptic beta-D-g 98.6 1.1E-06 2.3E-11 110.1 17.2 248 27-331 318-602 (1021)
13 PRK09525 lacZ beta-D-galactosi 98.5 2E-06 4.4E-11 107.6 16.4 124 27-188 334-464 (1027)
14 COG3250 LacZ Beta-galactosidas 98.4 4.8E-06 1E-10 101.1 15.6 137 27-211 284-426 (808)
15 PF13364 BetaGal_dom4_5: Beta- 98.3 2.6E-06 5.6E-11 79.7 8.2 78 432-516 30-110 (111)
16 PF02837 Glyco_hydro_2_N: Glyc 98.0 1.7E-05 3.8E-10 78.4 8.4 98 433-536 64-163 (167)
17 smart00633 Glyco_10 Glycosyl h 98.0 2.1E-05 4.5E-10 83.8 9.1 115 81-221 3-124 (254)
18 TIGR03356 BGL beta-galactosida 97.8 7.1E-05 1.5E-09 85.7 8.8 97 58-167 54-151 (427)
19 PLN02801 beta-amylase 97.8 0.00011 2.4E-09 83.7 10.0 80 56-141 35-126 (517)
20 PLN02705 beta-amylase 97.8 0.00011 2.4E-09 84.7 10.1 78 58-141 268-357 (681)
21 PLN02161 beta-amylase 97.7 0.00014 3E-09 82.8 10.4 76 60-141 119-206 (531)
22 PLN00197 beta-amylase; Provisi 97.7 0.00014 3E-09 83.5 10.3 79 57-141 126-216 (573)
23 PF03198 Glyco_hydro_72: Gluca 97.7 0.00037 8E-09 75.7 13.1 152 27-218 9-179 (314)
24 PLN02905 beta-amylase 97.7 0.00014 3E-09 84.2 10.3 76 60-141 288-375 (702)
25 PLN02803 beta-amylase 97.7 0.0002 4.3E-09 82.0 10.4 77 59-141 108-196 (548)
26 PF13204 DUF4038: Protein of u 97.6 0.00054 1.2E-08 74.6 12.7 213 34-277 3-274 (289)
27 PF01373 Glyco_hydro_14: Glyco 97.5 0.00011 2.3E-09 82.3 5.9 110 60-183 18-152 (402)
28 PF00331 Glyco_hydro_10: Glyco 97.1 0.00063 1.4E-08 75.1 5.2 157 45-222 11-178 (320)
29 COG3693 XynA Beta-1,4-xylanase 97.0 0.0047 1E-07 67.2 10.7 132 67-222 55-193 (345)
30 PF00232 Glyco_hydro_1: Glycos 96.9 0.0014 3E-08 75.9 6.6 96 58-166 58-155 (455)
31 PF07745 Glyco_hydro_53: Glyco 96.8 0.0042 9.1E-08 68.8 9.3 104 61-188 27-136 (332)
32 COG2730 BglC Endoglucanase [Ca 96.6 0.0066 1.4E-07 69.3 9.3 114 56-188 66-192 (407)
33 PRK15014 6-phospho-beta-glucos 96.6 0.0066 1.4E-07 70.6 8.8 96 58-166 69-167 (477)
34 PRK09852 cryptic 6-phospho-bet 96.4 0.0032 6.9E-08 73.1 5.0 96 58-166 71-169 (474)
35 PRK10150 beta-D-glucuronidase; 96.4 0.018 3.8E-07 69.1 11.1 99 434-538 62-178 (604)
36 PLN02998 beta-glucosidase 96.3 0.0038 8.2E-08 72.9 5.0 100 58-166 82-183 (497)
37 PF02837 Glyco_hydro_2_N: Glyc 96.3 0.011 2.4E-07 58.4 7.2 66 589-685 67-136 (167)
38 PF14488 DUF4434: Domain of un 96.2 0.051 1.1E-06 54.6 11.6 128 53-212 15-151 (166)
39 PLN02814 beta-glucosidase 96.2 0.005 1.1E-07 72.0 5.0 100 58-166 77-178 (504)
40 TIGR01233 lacG 6-phospho-beta- 96.2 0.024 5.2E-07 65.9 10.3 103 58-173 53-156 (467)
41 PRK13511 6-phospho-beta-galact 96.2 0.016 3.4E-07 67.5 8.7 96 58-166 54-150 (469)
42 PRK09593 arb 6-phospho-beta-gl 96.1 0.0087 1.9E-07 69.7 6.0 100 58-166 73-175 (478)
43 PRK10340 ebgA cryptic beta-D-g 95.8 0.031 6.6E-07 70.9 9.7 93 437-538 109-205 (1021)
44 PLN02849 beta-glucosidase 95.7 0.012 2.6E-07 68.9 5.3 100 58-166 79-180 (503)
45 PRK09589 celA 6-phospho-beta-g 95.7 0.014 3E-07 68.0 5.6 100 58-166 67-169 (476)
46 COG3867 Arabinogalactan endo-1 95.5 0.12 2.7E-06 55.7 11.1 113 58-189 63-183 (403)
47 PRK09525 lacZ beta-D-galactosi 95.2 0.065 1.4E-06 68.0 9.6 95 436-538 119-217 (1027)
48 PRK09936 hypothetical protein; 95.2 0.051 1.1E-06 58.7 7.4 58 53-116 33-91 (296)
49 PF14871 GHL6: Hypothetical gl 94.9 0.13 2.9E-06 49.8 8.7 99 62-165 4-123 (132)
50 COG2723 BglB Beta-glucosidase/ 94.2 0.057 1.2E-06 62.0 5.2 96 58-166 59-157 (460)
51 TIGR01515 branching_enzym alph 92.4 1.7 3.6E-05 52.6 13.9 52 65-117 164-226 (613)
52 PF02638 DUF187: Glycosyl hydr 91.6 0.93 2E-05 50.1 9.8 117 56-185 17-162 (311)
53 smart00642 Aamy Alpha-amylase 91.0 0.58 1.2E-05 47.0 6.8 65 60-124 21-97 (166)
54 TIGR00542 hxl6Piso_put hexulos 89.2 5.4 0.00012 42.8 13.0 127 57-216 15-149 (279)
55 PRK13210 putative L-xylulose 5 87.7 5.2 0.00011 42.7 11.5 131 58-216 16-149 (284)
56 smart00812 Alpha_L_fucos Alpha 87.6 58 0.0013 37.2 20.4 235 53-338 79-337 (384)
57 COG3934 Endo-beta-mannanase [C 87.3 0.42 9E-06 54.8 2.9 156 36-210 4-168 (587)
58 PRK05402 glycogen branching en 85.3 10 0.00022 46.8 13.7 53 65-117 273-335 (726)
59 PRK09441 cytoplasmic alpha-amy 85.0 1.5 3.2E-05 51.3 6.0 60 58-117 19-101 (479)
60 PRK14706 glycogen branching en 84.9 11 0.00024 45.9 13.4 53 65-117 175-237 (639)
61 PRK12568 glycogen branching en 84.7 14 0.00029 45.6 14.1 55 63-119 275-341 (730)
62 PF00128 Alpha-amylase: Alpha 84.7 1.1 2.3E-05 47.8 4.4 57 61-117 7-72 (316)
63 PF01229 Glyco_hydro_39: Glyco 84.1 3.9 8.5E-05 47.9 9.0 142 48-209 29-187 (486)
64 PF01261 AP_endonuc_2: Xylose 83.0 3.6 7.9E-05 41.2 7.2 124 64-216 1-128 (213)
65 TIGR01531 glyc_debranch glycog 82.4 3.3 7.3E-05 53.6 7.9 113 34-153 103-235 (1464)
66 PRK01060 endonuclease IV; Prov 82.2 28 0.0006 37.2 14.0 93 60-182 14-109 (281)
67 cd00019 AP2Ec AP endonuclease 81.5 17 0.00037 39.0 12.0 55 58-116 10-65 (279)
68 COG1649 Uncharacterized protei 80.2 5.7 0.00012 45.6 8.1 123 56-188 62-210 (418)
69 TIGR02402 trehalose_TreZ malto 80.0 3.1 6.6E-05 49.6 6.2 53 62-117 115-180 (542)
70 KOG2230 Predicted beta-mannosi 79.7 11 0.00023 44.6 9.9 149 34-223 328-494 (867)
71 PF05913 DUF871: Bacterial pro 79.6 2.6 5.7E-05 47.5 5.2 71 46-122 2-72 (357)
72 PRK13209 L-xylulose 5-phosphat 79.2 17 0.00037 38.9 11.1 126 58-216 21-154 (283)
73 TIGR02631 xylA_Arthro xylose i 78.6 37 0.00081 38.7 14.0 91 56-166 30-125 (382)
74 TIGR03234 OH-pyruv-isom hydrox 78.1 33 0.00072 36.1 12.8 44 58-115 14-57 (254)
75 PF14587 Glyco_hydr_30_2: O-Gl 77.0 19 0.0004 41.1 10.8 123 86-223 93-227 (384)
76 PRK09856 fructoselysine 3-epim 76.4 29 0.00062 36.9 11.8 130 58-216 13-145 (275)
77 PRK12313 glycogen branching en 75.2 5.4 0.00012 48.4 6.5 54 64-117 177-240 (633)
78 PF13200 DUF4015: Putative gly 74.9 10 0.00022 42.2 7.9 111 57-169 12-137 (316)
79 PLN02447 1,4-alpha-glucan-bran 74.7 6.2 0.00013 48.7 6.8 59 59-117 252-320 (758)
80 PRK10785 maltodextrin glucosid 74.1 5.7 0.00012 47.9 6.2 57 61-117 182-246 (598)
81 PRK09997 hydroxypyruvate isome 73.1 46 0.001 35.3 12.3 42 60-115 17-58 (258)
82 PLN02960 alpha-amylase 72.9 7.1 0.00015 48.7 6.7 56 62-117 421-486 (897)
83 PF02065 Melibiase: Melibiase; 72.9 18 0.00039 41.5 9.5 89 51-139 51-148 (394)
84 PLN00196 alpha-amylase; Provis 72.9 20 0.00043 41.5 10.0 57 61-117 47-112 (428)
85 PRK09505 malS alpha-amylase; R 72.4 7 0.00015 47.8 6.5 58 60-117 232-312 (683)
86 COG0296 GlgB 1,4-alpha-glucan 72.2 6.8 0.00015 47.2 6.2 52 61-116 168-233 (628)
87 PF14683 CBM-like: Polysacchar 72.1 4.2 9E-05 41.0 3.8 61 615-690 93-154 (167)
88 TIGR02403 trehalose_treC alpha 71.5 6.4 0.00014 46.9 5.9 56 60-117 29-95 (543)
89 PRK10933 trehalose-6-phosphate 70.8 8.4 0.00018 46.0 6.6 55 60-117 35-101 (551)
90 TIGR02104 pulA_typeI pullulana 70.8 7.8 0.00017 46.8 6.4 55 62-117 168-249 (605)
91 PF03659 Glyco_hydro_71: Glyco 69.4 18 0.00039 41.3 8.6 53 56-117 15-67 (386)
92 TIGR02456 treS_nterm trehalose 68.8 10 0.00022 45.2 6.7 56 59-117 29-96 (539)
93 smart00518 AP2Ec AP endonuclea 67.2 47 0.001 35.3 10.9 92 60-182 12-104 (273)
94 PF06832 BiPBP_C: Penicillin-B 67.1 9 0.00019 34.1 4.5 50 460-517 34-84 (89)
95 KOG0626 Beta-glucosidase, lact 66.9 13 0.00028 43.7 6.8 113 59-182 92-208 (524)
96 cd06593 GH31_xylosidase_YicI Y 66.6 8.1 0.00018 42.4 5.0 69 56-124 22-93 (308)
97 PRK09989 hypothetical protein; 66.0 51 0.0011 34.9 10.8 43 59-115 16-58 (258)
98 PRK14705 glycogen branching en 65.7 11 0.00024 48.8 6.6 55 63-117 771-835 (1224)
99 PF02679 ComA: (2R)-phospho-3- 65.2 13 0.00029 39.7 6.0 52 57-118 83-134 (244)
100 TIGR00677 fadh2_euk methylenet 65.2 25 0.00055 38.3 8.4 109 44-167 130-251 (281)
101 PF01791 DeoC: DeoC/LacD famil 64.5 3.3 7.1E-05 43.7 1.4 53 61-116 79-131 (236)
102 KOG4729 Galactoside-binding le 63.8 23 0.0005 38.1 7.3 154 617-795 54-230 (265)
103 PRK14510 putative bifunctional 63.7 11 0.00023 49.3 5.9 56 62-117 191-267 (1221)
104 PF01261 AP_endonuc_2: Xylose 62.6 63 0.0014 32.1 10.2 103 59-190 28-137 (213)
105 PF13199 Glyco_hydro_66: Glyco 62.0 15 0.00032 43.9 6.3 78 59-136 119-211 (559)
106 PF14307 Glyco_tran_WbsX: Glyc 62.0 63 0.0014 36.2 11.0 134 56-220 56-195 (345)
107 TIGR02103 pullul_strch alpha-1 61.4 15 0.00032 46.4 6.3 21 97-117 404-424 (898)
108 TIGR02401 trehalose_TreY malto 61.0 17 0.00037 45.3 6.7 63 57-119 15-87 (825)
109 PLN02361 alpha-amylase 60.2 19 0.00042 41.3 6.6 57 61-117 32-96 (401)
110 PF02055 Glyco_hydro_30: O-Gly 59.9 45 0.00098 39.4 9.7 139 68-222 110-280 (496)
111 cd04908 ACT_Bt0572_1 N-termina 59.7 26 0.00057 29.1 5.8 56 56-115 11-66 (66)
112 cd06592 GH31_glucosidase_KIAA1 58.1 20 0.00044 39.4 6.1 69 53-124 25-97 (303)
113 PRK14511 maltooligosyl trehalo 57.5 22 0.00047 44.7 6.8 64 56-122 18-94 (879)
114 PRK13398 3-deoxy-7-phosphohept 57.4 38 0.00081 36.8 7.9 74 36-117 21-98 (266)
115 PRK12677 xylose isomerase; Pro 56.9 1.1E+02 0.0023 35.1 11.8 90 58-166 31-124 (384)
116 PF08308 PEGA: PEGA domain; I 56.4 12 0.00027 31.6 3.2 47 461-519 3-49 (71)
117 PRK14507 putative bifunctional 56.4 21 0.00046 47.8 6.7 61 56-119 756-829 (1693)
118 PF11875 DUF3395: Domain of un 54.1 24 0.00052 35.0 5.3 66 727-794 55-132 (151)
119 TIGR02100 glgX_debranch glycog 53.4 22 0.00047 43.8 5.9 55 63-117 189-265 (688)
120 PLN02877 alpha-amylase/limit d 53.3 25 0.00055 44.6 6.5 21 97-117 466-486 (970)
121 PRK14582 pgaB outer membrane N 52.2 50 0.0011 40.5 8.5 110 59-187 335-468 (671)
122 cd06591 GH31_xylosidase_XylS X 51.2 20 0.00043 39.8 4.7 66 56-122 22-91 (319)
123 PRK03705 glycogen debranching 50.8 26 0.00057 42.8 6.0 55 63-117 184-262 (658)
124 COG3623 SgaU Putative L-xylulo 50.1 1.7E+02 0.0037 31.4 10.8 124 57-214 17-149 (287)
125 cd06545 GH18_3CO4_chitinase Th 49.9 51 0.0011 35.0 7.5 96 88-213 36-132 (253)
126 PF08531 Bac_rhamnosid_N: Alph 49.6 25 0.00054 35.4 4.7 22 608-629 7-28 (172)
127 TIGR02102 pullulan_Gpos pullul 49.1 29 0.00062 44.9 6.1 56 62-117 484-575 (1111)
128 TIGR02455 TreS_stutzeri trehal 48.7 37 0.0008 41.3 6.5 75 56-134 76-175 (688)
129 TIGR03849 arch_ComA phosphosul 47.4 36 0.00079 36.3 5.7 51 58-118 71-121 (237)
130 KOG0259 Tyrosine aminotransfer 46.0 30 0.00064 39.4 4.9 102 7-116 135-238 (447)
131 cd02742 GH20_hexosaminidase Be 45.8 32 0.0007 37.8 5.3 59 56-117 14-92 (303)
132 cd06565 GH20_GcnA-like Glycosy 45.6 60 0.0013 35.7 7.3 58 56-117 15-80 (301)
133 PF11324 DUF3126: Protein of u 45.2 49 0.0011 28.2 4.9 23 466-488 25-47 (63)
134 TIGR00676 fadh2 5,10-methylene 45.0 90 0.002 33.8 8.5 109 43-166 125-246 (272)
135 cd06603 GH31_GANC_GANAB_alpha 44.2 30 0.00066 38.6 4.8 74 50-124 13-91 (339)
136 cd06598 GH31_transferase_CtsZ 43.5 32 0.00069 38.1 4.8 68 56-123 22-96 (317)
137 cd06602 GH31_MGAM_SI_GAA This 43.4 32 0.00069 38.5 4.8 74 50-124 13-93 (339)
138 COG0366 AmyA Glycosidases [Car 43.3 32 0.0007 39.6 5.1 56 62-117 33-97 (505)
139 cd06416 GH25_Lys1-like Lys-1 i 43.0 47 0.001 33.9 5.7 87 48-137 56-157 (196)
140 COG1306 Uncharacterized conser 42.2 42 0.00091 37.0 5.2 59 56-117 75-144 (400)
141 TIGR00433 bioB biotin syntheta 40.8 44 0.00095 36.1 5.3 53 61-116 123-177 (296)
142 cd06418 GH25_BacA-like BacA is 40.0 1.7E+02 0.0036 30.8 9.2 90 56-168 50-140 (212)
143 PTZ00372 endonuclease 4-like p 39.6 1.3E+02 0.0029 34.7 9.1 84 34-118 149-240 (413)
144 cd06599 GH31_glycosidase_Aec37 38.4 50 0.0011 36.5 5.4 66 58-123 29-99 (317)
145 cd06600 GH31_MGAM-like This fa 38.1 41 0.0009 37.2 4.6 73 50-123 13-90 (317)
146 PLN02784 alpha-amylase 37.8 64 0.0014 40.5 6.5 57 61-117 524-588 (894)
147 COG1523 PulA Type II secretory 37.8 50 0.0011 40.6 5.6 55 63-117 205-285 (697)
148 cd06589 GH31 The enzymes of gl 37.5 42 0.0009 36.1 4.4 65 56-121 22-90 (265)
149 KOG2024 Beta-Glucuronidase GUS 35.5 46 0.001 36.1 4.2 49 433-482 84-132 (297)
150 cd06604 GH31_glucosidase_II_Ma 35.5 53 0.0011 36.7 5.0 74 50-124 13-91 (339)
151 PF12876 Cellulase-like: Sugar 35.2 67 0.0015 28.5 4.7 44 175-218 8-60 (88)
152 COG3589 Uncharacterized conser 35.0 77 0.0017 35.5 5.9 72 46-124 4-76 (360)
153 TIGR00587 nfo apurinic endonuc 34.8 2.8E+02 0.006 29.9 10.3 83 61-166 14-98 (274)
154 PF02228 Gag_p19: Major core p 34.5 18 0.00039 31.9 0.8 37 56-109 20-56 (92)
155 cd06595 GH31_xylosidase_XylS-l 33.8 63 0.0014 35.3 5.1 65 56-120 23-97 (292)
156 cd06563 GH20_chitobiase-like T 33.5 1.5E+02 0.0032 33.5 8.1 59 56-117 16-106 (357)
157 PLN03059 beta-galactosidase; P 33.4 1.6E+02 0.0035 37.0 9.0 41 589-630 469-517 (840)
158 PRK09856 fructoselysine 3-epim 32.8 53 0.0012 34.9 4.3 61 59-120 91-153 (275)
159 cd06564 GH20_DspB_LnbB-like Gl 32.6 1.2E+02 0.0026 33.7 7.2 59 56-117 15-102 (326)
160 cd06601 GH31_lyase_GLase GLase 32.6 1.2E+02 0.0027 33.9 7.2 72 50-122 13-89 (332)
161 KOG0496 Beta-galactosidase [Ca 32.0 14 0.00029 44.5 -0.4 55 721-776 335-389 (649)
162 PRK12858 tagatose 1,6-diphosph 32.0 50 0.0011 37.2 4.0 65 50-117 99-163 (340)
163 PF07691 PA14: PA14 domain; I 31.6 1.7E+02 0.0036 27.6 7.2 70 438-515 47-122 (145)
164 PRK08673 3-deoxy-7-phosphohept 31.4 1.1E+02 0.0024 34.5 6.5 75 36-117 87-164 (335)
165 PF01055 Glyco_hydro_31: Glyco 31.2 76 0.0017 36.5 5.5 70 56-126 41-112 (441)
166 cd01299 Met_dep_hydrolase_A Me 30.9 82 0.0018 34.5 5.5 59 56-117 118-180 (342)
167 cd06570 GH20_chitobiase-like_1 30.0 1.7E+02 0.0037 32.4 7.8 60 55-117 15-88 (311)
168 PRK13209 L-xylulose 5-phosphat 30.0 2.7E+02 0.0058 29.7 9.2 103 56-188 55-161 (283)
169 COG1891 Uncharacterized protei 29.6 19 0.00042 36.6 0.3 65 44-116 117-186 (235)
170 PRK09432 metF 5,10-methylenete 29.0 94 0.002 34.2 5.5 89 63-167 168-266 (296)
171 PLN02389 biotin synthase 28.9 76 0.0016 36.3 4.9 51 60-113 177-229 (379)
172 PF08924 DUF1906: Domain of un 28.7 1.6E+02 0.0035 28.5 6.5 92 56-168 36-128 (136)
173 PTZ00372 endonuclease 4-like p 28.5 3.6E+02 0.0079 31.3 10.2 53 61-121 144-202 (413)
174 PF00728 Glyco_hydro_20: Glyco 28.4 76 0.0016 35.1 4.7 59 56-117 16-93 (351)
175 PF01120 Alpha_L_fucos: Alpha- 28.3 8.8E+02 0.019 27.2 14.9 230 62-336 95-342 (346)
176 cd06597 GH31_transferase_CtsY 28.3 87 0.0019 35.1 5.2 74 50-123 13-111 (340)
177 PRK08645 bifunctional homocyst 28.2 1.6E+02 0.0035 35.7 7.8 110 41-166 461-578 (612)
178 PRK01060 endonuclease IV; Prov 27.9 2.2E+02 0.0048 30.3 8.1 55 63-118 52-111 (281)
179 cd06562 GH20_HexA_HexB-like Be 27.9 2.3E+02 0.005 31.8 8.5 59 56-117 16-90 (348)
180 COG1082 IolE Sugar phosphate i 27.7 6.7E+02 0.015 26.2 11.7 51 56-115 13-63 (274)
181 PF08531 Bac_rhamnosid_N: Alph 27.6 1.1E+02 0.0024 30.7 5.4 55 460-515 6-67 (172)
182 PRK07094 biotin synthase; Prov 27.0 63 0.0014 35.5 3.8 50 61-113 129-181 (323)
183 cd04882 ACT_Bt0572_2 C-termina 26.9 1.2E+02 0.0026 24.3 4.5 55 57-113 10-64 (65)
184 KOG3698 Hyaluronoglucosaminida 26.8 86 0.0019 37.4 4.8 74 38-119 11-96 (891)
185 PRK13210 putative L-xylulose 5 26.5 84 0.0018 33.5 4.5 60 58-118 94-154 (284)
186 cd00544 CobU Adenosylcobinamid 26.5 4.2E+02 0.0091 26.6 9.3 50 154-211 101-150 (169)
187 PRK09997 hydroxypyruvate isome 26.3 82 0.0018 33.3 4.4 60 58-117 85-144 (258)
188 TIGR01698 PUNP purine nucleoti 25.8 89 0.0019 33.4 4.4 39 37-75 47-86 (237)
189 KOG0470 1,4-alpha-glucan branc 25.8 75 0.0016 39.0 4.2 56 61-117 258-331 (757)
190 PF14701 hDGE_amylase: glucano 25.6 2.9E+02 0.0063 32.1 8.7 111 49-166 11-143 (423)
191 PRK09875 putative hydrolase; P 25.6 1.2E+02 0.0025 33.5 5.4 87 29-135 8-94 (292)
192 cd06415 GH25_Cpl1-like Cpl-1 l 25.3 2.3E+02 0.005 28.9 7.3 44 97-140 108-158 (196)
193 COG2884 FtsE Predicted ATPase 25.1 52 0.0011 34.4 2.4 16 615-630 55-70 (223)
194 PRK12331 oxaloacetate decarbox 24.1 1.6E+02 0.0034 34.6 6.4 55 50-116 88-142 (448)
195 PRK10076 pyruvate formate lyas 24.1 2.8E+02 0.006 29.1 7.6 124 58-216 54-209 (213)
196 KOG1065 Maltase glucoamylase a 24.0 1.2E+02 0.0025 37.9 5.4 61 61-126 314-380 (805)
197 COG3684 LacD Tagatose-1,6-bisp 23.6 66 0.0014 34.8 2.9 52 63-117 116-167 (306)
198 cd07937 DRE_TIM_PC_TC_5S Pyruv 23.4 1.7E+02 0.0038 31.7 6.2 48 56-115 89-136 (275)
199 TIGR03700 mena_SCO4494 putativ 23.3 69 0.0015 36.0 3.2 51 60-113 149-204 (351)
200 PRK06852 aldolase; Validated 22.9 2.2E+02 0.0047 31.7 6.8 76 64-163 121-202 (304)
201 cd06525 GH25_Lyc-like Lyc mura 22.8 46 0.001 33.6 1.6 43 97-139 103-149 (184)
202 COG5309 Exo-beta-1,3-glucanase 22.6 6.5E+02 0.014 27.7 10.0 117 57-223 62-179 (305)
203 TIGR03551 F420_cofH 7,8-dideme 22.5 75 0.0016 35.5 3.3 49 61-113 141-195 (343)
204 cd07944 DRE_TIM_HOA_like 4-hyd 22.5 1.4E+02 0.0031 32.2 5.3 45 61-117 85-129 (266)
205 cd00311 TIM Triosephosphate is 22.2 1.8E+02 0.0039 31.2 5.9 74 39-118 52-125 (242)
206 PF10566 Glyco_hydro_97: Glyco 21.6 2.3E+02 0.0051 31.0 6.7 61 56-117 30-93 (273)
207 KOG0622 Ornithine decarboxylas 21.4 1.4E+02 0.0029 34.6 4.9 68 55-132 190-258 (448)
208 TIGR03234 OH-pyruv-isom hydrox 21.4 1.1E+02 0.0024 32.1 4.2 59 58-117 84-143 (254)
209 PRK08599 coproporphyrinogen II 21.2 86 0.0019 35.4 3.4 49 61-112 100-151 (377)
210 PF04914 DltD_C: DltD C-termin 20.6 78 0.0017 30.7 2.5 53 97-168 36-88 (130)
211 PRK09250 fructose-bisphosphate 20.3 1.1E+02 0.0024 34.5 4.0 49 63-117 151-199 (348)
212 PRK09267 flavodoxin FldA; Vali 20.3 5.3E+02 0.011 25.3 8.6 74 38-114 44-117 (169)
213 COG1735 Php Predicted metal-de 20.2 3.4E+02 0.0074 30.2 7.5 57 62-135 52-108 (316)
214 PLN02540 methylenetetrahydrofo 20.2 2.5E+02 0.0054 33.9 7.1 91 62-167 160-259 (565)
215 TIGR00419 tim triosephosphate 20.1 2E+02 0.0044 30.0 5.7 81 63-159 73-161 (205)
No 1
>PLN03059 beta-galactosidase; Provisional
Probab=100.00 E-value=2.2e-210 Score=1814.87 Aligned_cols=758 Identities=49% Similarity=0.934 Sum_probs=693.6
Q ss_pred HhhccccceeEEeeCceEEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchH
Q 036343 19 TLFNLSLAYRVSHDGRAITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLD 98 (795)
Q Consensus 19 ~~~~~~~~~~v~~~~~~~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~d 98 (795)
++|+.....+|++|+++|+|||+|++|+||+|||||++|++|+|+|+||||+|||||+||||||+|||+||+|||+|++|
T Consensus 20 ~~~~~~~~~~v~~d~~~f~idG~p~~i~sG~iHY~R~~p~~W~d~L~k~Ka~GlNtV~tYV~Wn~HEp~~G~~dF~G~~D 99 (840)
T PLN03059 20 SSWVSHGSASVSYDHRAFIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEDRYD 99 (840)
T ss_pred hhhhccceeEEEEeCCEEEECCEEEEEEEeCcccCcCCHHHHHHHHHHHHHcCCCeEEEEecccccCCCCCeeeccchHH
Confidence 66677778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcE
Q 036343 99 LIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPI 178 (795)
Q Consensus 99 l~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpI 178 (795)
|++||++|+|+||+|||||||||||||++||||.||+++|+|+ +||+||+|+++|++|+++|+++++++++++++||||
T Consensus 100 L~~Fl~la~e~GLyvilRpGPYIcAEw~~GGlP~WL~~~~~i~-~Rs~d~~fl~~v~~~~~~l~~~l~~~~l~~~~GGPI 178 (840)
T PLN03059 100 LVKFIKVVQAAGLYVHLRIGPYICAEWNFGGFPVWLKYVPGIE-FRTDNGPFKAAMQKFTEKIVDMMKSEKLFEPQGGPI 178 (840)
T ss_pred HHHHHHHHHHcCCEEEecCCcceeeeecCCCCchhhhcCCCcc-cccCCHHHHHHHHHHHHHHHHHHhhcceeecCCCcE
Confidence 9999999999999999999999999999999999999999999 999999999999999999999999889999999999
Q ss_pred EEeecccccccccccCCcccHHHHHHHHHHhhcCCCccceeeeCCCCCCCCC-----------CCCCCCCCCceeccccc
Q 036343 179 ILAQIENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWIMCQESDAPSPM-----------FTPNNPNSPKIWTENWT 247 (795)
Q Consensus 179 I~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~~-----------f~~~~~~~P~~~~E~~~ 247 (795)
||+|||||||++...|+.+|++||+||+++++++|++||||||++.++++.+ |.+.++.+|+||||||+
T Consensus 179 ImvQIENEYGs~~~~~~~~d~~Yl~~l~~~~~~~Gi~VPl~t~dg~~~~~~v~~t~Ng~~~~~f~~~~~~~P~m~tE~w~ 258 (840)
T PLN03059 179 ILSQIENEYGPVEWEIGAPGKAYTKWAADMAVKLGTGVPWVMCKQEDAPDPVIDTCNGFYCENFKPNKDYKPKMWTEAWT 258 (840)
T ss_pred EEEEecccccceecccCcchHHHHHHHHHHHHHcCCCcceEECCCCCCCccceecCCCchhhhcccCCCCCCcEEeccCc
Confidence 9999999999986667778999999999999999999999999997665443 55666678999999999
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHcCCeeeeeeeeeccCCCCCCCCCCCccccccCCCCCCcCCCCCChhHHHHHHH
Q 036343 248 GWFKSWGGKDPKRTAEDLAFAVARFFQFGGTFQNYYMYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLREL 327 (795)
Q Consensus 248 Gwf~~WG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~tpKy~~lr~l 327 (795)
|||++||++++.|+++|++.++++||++|+|++||||||||||||||+|+++++|||||||||+|+|++++|||.+||++
T Consensus 259 GWf~~wG~~~~~r~~~d~a~~~~~~l~~g~S~~N~YMfhGGTNFG~~~Ga~~~~TSYDYdAPL~E~G~~t~pKy~~lr~l 338 (840)
T PLN03059 259 GWYTEFGGAVPNRPAEDLAFSVARFIQNGGSFINYYMYHGGTNFGRTAGGPFIATSYDYDAPLDEYGLPREPKWGHLRDL 338 (840)
T ss_pred hhHhhcCCCCCcCCHHHHHHHHHHHHHcCCeeEEeeeccCcCCcccccCCCccccccccCCccccccCcchhHHHHHHHH
Confidence 99999999999999999999999999999998899999999999999999999999999999999999855899999999
Q ss_pred HHHHHhhhccccCCCcccccCCCCCC----------------------------CCcccCCCccccccCCCCccccccce
Q 036343 328 HKLLKSMEKTLTYGNVTNTDYGNSVS----------------------------GSSYNLPAWSVSILPDCKTEEFNTAK 379 (795)
Q Consensus 328 ~~~l~~~~~~l~~~~~~~~~l~~~~~----------------------------~~~~~lp~~sv~il~~~~~~~~~t~~ 379 (795)
|.+++.+++.|+..+|...+||++++ +++|.||||||+|||||+.++|+|++
T Consensus 339 ~~~~~~~~~~l~~~~p~~~~lg~~~ea~~y~~~~~caaFl~n~~~~~~~~v~f~g~~y~lp~~Svsilpd~~~~lfnta~ 418 (840)
T PLN03059 339 HKAIKLCEPALVSVDPTVTSLGSNQEAHVFKSKSACAAFLANYDTKYSVKVTFGNGQYDLPPWSVSILPDCKTAVFNTAR 418 (840)
T ss_pred HHHHHhcCccccCCCCceeccCCceeEEEccCccchhhheeccCCCCceeEEECCcccccCccceeecccccceeeeccc
Confidence 99999888888877776555443111 67899999999999999999999999
Q ss_pred ecccccceecccCCCCCCCCccccccccccccc-ccccCCccccccchhhccC-CCCCccEEEEEEeeCCCCCCccccCC
Q 036343 380 VNTQTNVKVKRPNQAGNDQAPLQWKWRPEMIND-FVVRGKGHFALNTLIDQKS-TNDVSDYLWYMTNADLKDDDPILSGS 457 (795)
Q Consensus 380 v~~~~~~~~~~~~~~~~~~~~l~~~w~~~~~e~-~~~~~~~~~~~~~~~Eql~-t~~~~GYl~Y~T~i~~~~~~~~~~~~ 457 (795)
++.|.+.+++.+. ...+ .|+.+. |+ .+...+.+++++.++||++ |+|.+||+||+|+|....++...+++
T Consensus 419 v~~q~~~~~~~~~-----~~~~--~w~~~~-e~~~~~~~~~~~~~e~l~e~~n~t~d~~dYlwY~t~i~~~~~~~~~~~~ 490 (840)
T PLN03059 419 LGAQSSQMKMNPV-----GSTF--SWQSYN-EETASAYTDDTTTMDGLWEQINVTRDATDYLWYMTEVHIDPDEGFLKTG 490 (840)
T ss_pred cccccceeecccc-----cccc--cceeec-ccccccccCCCcchhhHHHhhcccCCCCceEEEEEEEeecCCccccccC
Confidence 9888766543322 2334 799998 87 4443445788889999999 99999999999999876655322355
Q ss_pred CCceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCccEEEEEEeecCcccccCCCcccCCCCCCCeEEE
Q 036343 458 SNMTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGKNQISLLSATVGLQNYGSKFDMVPNGIPGPVLLV 537 (795)
Q Consensus 458 ~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~n~L~ILVEn~GRvNyG~~l~~~~KGI~g~V~l~ 537 (795)
.+++|+|.+++|++||||||+++|++++......++++.+++++.|.|+|+||||||||+|||++|+++.|||+|+|+|
T Consensus 491 ~~~~L~v~~~~d~~~vFVNg~~~Gt~~~~~~~~~~~~~~~v~l~~g~n~L~iLse~vG~~NyG~~le~~~kGI~g~V~i- 569 (840)
T PLN03059 491 QYPVLTIFSAGHALHVFINGQLAGTVYGELSNPKLTFSQNVKLTVGINKISLLSVAVGLPNVGLHFETWNAGVLGPVTL- 569 (840)
T ss_pred CCceEEEcccCcEEEEEECCEEEEEEEeecCCcceEEecccccCCCceEEEEEEEeCCCCccCcccccccccccccEEE-
Confidence 6789999999999999999999999998776677888888889999999999999999999999999999999999999
Q ss_pred eecCCcceeecCCcCccEEEecCCCccccccccccccCccCCCcCCCc-CCCccceEEEEEEEcCCCCCceEEEeCCcee
Q 036343 538 GRAGDETIIKDLSSHKWTYKVGLYGLDDKKFYNAKAANSERGWSSKNV-PLNRRMTWYKTTFEAPLENDPVVLNLQGMGK 616 (795)
Q Consensus 538 ~~~g~~~~~~dL~~~~W~~~~~l~ge~~~~i~~~~~~~~~~~w~~~~~-~~~~~p~~yk~~F~~p~~~dp~~Ld~~g~gK 616 (795)
+|+++++.||++|.|.|+++|+||. ++|+..++.. ++.|.+... +..+||+|||++|++|+++|||||||+||||
T Consensus 570 --~g~~~g~~dls~~~W~y~lgL~GE~-~~i~~~~~~~-~~~W~~~~~~~~~~p~twYK~~Fd~p~g~Dpv~LDm~gmGK 645 (840)
T PLN03059 570 --KGLNEGTRDLSGWKWSYKIGLKGEA-LSLHTITGSS-SVEWVEGSLLAQKQPLTWYKTTFDAPGGNDPLALDMSSMGK 645 (840)
T ss_pred --ecccCCceecccCccccccCcccee-ccccccCCCC-CccccccccccCCCCceEEEEEEeCCCCCCCEEEecccCCC
Confidence 7877778899999999999999998 8888765444 688976543 4456799999999999999999999999999
Q ss_pred EEEEEcCeeecccccccccccCCCCCCCcCCCCCCCCCcccCCCCCCceeEEecCcccccCCcceEEEEEeccCCCCcee
Q 036343 617 GFAWVNGYNLGRYWPTYLAEEDGCSTESCDYRGPYGSDKCAYNCGNPSQIWYHVPRSWIKDGVNTLVLFEEFGGNPSQIN 696 (795)
Q Consensus 617 G~vwVNG~nLGRYW~~~~~~~~Gc~~~~~~~G~~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~IvvfEe~g~~p~~i~ 696 (795)
|+|||||+||||||+.. ++.+|| +.|+|+|.|+ ++||++|||+|||+|||||++|||+|+|+||||||+|++|..|+
T Consensus 646 G~aWVNG~nIGRYW~~~-a~~~gC-~~c~y~g~~~-~~kc~~~cggP~q~lYHVPr~~Lk~g~N~lViFEe~gg~p~~I~ 722 (840)
T PLN03059 646 GQIWINGQSIGRHWPAY-TAHGSC-NGCNYAGTFD-DKKCRTNCGEPSQRWYHVPRSWLKPSGNLLIVFEEWGGNPAGIS 722 (840)
T ss_pred eeEEECCcccccccccc-cccCCC-cccccccccc-chhhhccCCCceeEEEeCcHHHhccCCceEEEEEecCCCCCceE
Confidence 99999999999999763 566899 8899999997 99999999999999999999999999999999999999999999
Q ss_pred eeeeeccccccccCCCCe-------------------eEEeeC-CeeEeEEeeeecCCCCCCCCCcccccccCCCCchHH
Q 036343 697 FQTVVVGTACGQAHENKT-------------------MELTCH-GRRISEIKYASFGDPQGACGAFKKGSCEAEIDVLPL 756 (795)
Q Consensus 697 l~~~~~~~vC~~~~E~~~-------------------~~L~C~-g~~I~~I~~A~YGr~~~~C~~~~~~~C~~~~~s~~~ 756 (795)
|.++.++++|.+++|++. ++|+|+ |++|+.|.+|+||||.++|+++++++|+++ +|+++
T Consensus 723 ~~~~~~~~~c~~~~e~~p~~~~w~~~~~~~~~~~~~~~~L~C~~G~~Is~I~fAsYGrp~gtC~~~~~g~C~a~-~S~~v 801 (840)
T PLN03059 723 LVKRTTDSVCADIFEGQPALKNWQIIASGKVNSLQPKAHLWCPPGQKISKIKFASFGVPQGTCGSFREGSCHAH-KSYDA 801 (840)
T ss_pred EEEeecCcccccccccCCccccccccccccccccCCcEEEECCCCceEEEEEEecCCCCCCCCCCCCCCCEeCC-cHHHH
Confidence 999999999999999983 999999 999988999999999999999999999999 99999
Q ss_pred HHhhCCCCCccEEEecCCCcCCCCCCCCCeeEEEEEEEC
Q 036343 757 IEKQCVGKKSCSIEASEANLGATSCAAGTVKRLVVEALC 795 (795)
Q Consensus 757 v~~~C~Gk~~C~v~as~~~fg~DPC~~gt~KyL~v~y~C 795 (795)
|+++|+||++|+|.+++.+||+|||+ ||+|||+|+|.|
T Consensus 802 V~kaC~Gk~~CsV~asn~~FggDPC~-gt~KyL~V~~~C 839 (840)
T PLN03059 802 FERNCIGKQSCSVTVAPEVFGGDPCP-DSMKKLSVEAVC 839 (840)
T ss_pred HHHHCCCCCceEEEeccceecCCCCC-CceeEEEEEEEe
Confidence 99999999999999999999669999 999999999999
No 2
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-148 Score=1251.97 Aligned_cols=597 Identities=53% Similarity=0.985 Sum_probs=544.8
Q ss_pred ceeEEeeCceEEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHH
Q 036343 26 AYRVSHDGRAITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKT 105 (795)
Q Consensus 26 ~~~v~~~~~~~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~ 105 (795)
.+.|++|+++|++||+|++++||++||||++|++|+|+|+|||++|+|+|+||||||+|||+||+|||+|+.||++||++
T Consensus 17 ~~~v~yd~~~~~idG~r~~~isGsIHY~R~~pe~W~~~i~k~k~~Gln~IqtYVfWn~Hep~~g~y~FsG~~DlvkFikl 96 (649)
T KOG0496|consen 17 SFNVTYDKRSLLIDGQRFILISGSIHYPRSTPEMWPDLIKKAKAGGLNVIQTYVFWNLHEPSPGKYDFSGRYDLVKFIKL 96 (649)
T ss_pred eeEEeccccceeecCCeeEEEEeccccccCChhhhHHHHHHHHhcCCceeeeeeecccccCCCCcccccchhHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccc
Q 036343 106 IQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIEN 185 (795)
Q Consensus 106 a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiEN 185 (795)
|+++||+|+||+||||||||++||+|.||...|++. +||+|++|+++|++|+++|+++++ +|+++|||||||+||||
T Consensus 97 ~~~~GLyv~LRiGPyIcaEw~~GG~P~wL~~~pg~~-~Rt~nepfk~~~~~~~~~iv~~mk--~L~~~qGGPIIl~QIEN 173 (649)
T KOG0496|consen 97 IHKAGLYVILRIGPYICAEWNFGGLPWWLRNVPGIV-FRTDNEPFKAEMERWTTKIVPMMK--KLFASQGGPIILVQIEN 173 (649)
T ss_pred HHHCCeEEEecCCCeEEecccCCCcchhhhhCCceE-EecCChHHHHHHHHHHHHHHHHHH--HHHhhcCCCEEEEEeec
Confidence 999999999999999999999999999999999999 999999999999999999999999 99999999999999999
Q ss_pred ccccccccCCcccHHHHHHHHHHhhcCCCccceeeeCCCCCCCCC------------CC-CCCCCCCceecccccccccc
Q 036343 186 EYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWIMCQESDAPSPM------------FT-PNNPNSPKIWTENWTGWFKS 252 (795)
Q Consensus 186 Eyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~~------------f~-~~~~~~P~~~~E~~~Gwf~~ 252 (795)
|||.+...|++..+.|++|-..|+...+.++||+||.+.|+|+.+ |. +++|++|+||||||+|||++
T Consensus 174 EYG~~~~~~~~~~k~y~~w~a~m~~~l~~gvpw~mCk~~dapd~~in~cng~~c~~~f~~pn~~~kP~~wtE~wtgwf~~ 253 (649)
T KOG0496|consen 174 EYGNYLRALGAEGKSYLKWAAVLATSLGTGVPWVMCKQDDAPDPGINTCNGFYCGDTFKRPNSPNKPLVWTENWTGWFTH 253 (649)
T ss_pred hhhHHHHHHHHHHHHhhccceEEEEecCCCCceeEecCCCCCCccccccCCccchhhhccCCCCCCCceecccccchhhh
Confidence 999887678888999999999999999999999999999887764 44 78999999999999999999
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHcCCeeeeeeeeeccCCCCCCCCCCCccccccCCCCCCcCCCCCChhHHHHHHHHHHHH
Q 036343 253 WGGKDPKRTAEDLAFAVARFFQFGGTFQNYYMYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLRELHKLLK 332 (795)
Q Consensus 253 WG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~tpKy~~lr~l~~~l~ 332 (795)
||++++.|+++|++..+++|+++|+|++||||||||||||++|| ++.+|||||||||| |..++|||.|+|.+|..++
T Consensus 254 wGg~~~~R~~e~ia~~va~fls~ggs~vNyYM~hGGTNFGrt~G-~~~atsy~~dap~d--gl~~~pk~ghlk~~hts~d 330 (649)
T KOG0496|consen 254 WGGPHPCRPVEDIALSVARFLSKGGSSVNYYMYHGGTNFGRTNG-PFIATSYDYDAPLD--GLLRQPKYGHLKPLHTSYD 330 (649)
T ss_pred hCCCCCCCCHHHHHHHHHHHHhcCccceEEEEeecccCCCcccC-cccccccccccccc--hhhcCCCccccccchhhhh
Confidence 99999999999999999999999999999999999999999998 99999999999999 9999999999999999999
Q ss_pred hhhccccCCCcccccCCCCCC--------------------CCcccCCCccccccCCCCccccccceecccccceecccC
Q 036343 333 SMEKTLTYGNVTNTDYGNSVS--------------------GSSYNLPAWSVSILPDCKTEEFNTAKVNTQTNVKVKRPN 392 (795)
Q Consensus 333 ~~~~~l~~~~~~~~~l~~~~~--------------------~~~~~lp~~sv~il~~~~~~~~~t~~v~~~~~~~~~~~~ 392 (795)
.+++.+..+++...++|+..+ +++|.+|+|+++|+|+|++++|+|+++..+
T Consensus 331 ~~ep~lv~gd~~~~kyg~~~~~C~~Fl~n~~~~~~~~v~f~~~~y~~~~~slsilpdck~~~~nta~~~~~--------- 401 (649)
T KOG0496|consen 331 YCEPALVAGDITTAKYGNLREACAAFLSNNNGAPAAPVPFNKPKYRLPPWSLSILPDCKTVVYNTAKVMAQ--------- 401 (649)
T ss_pred hcCccccccCcccccccchhhHHHHHHhcCCCCCCCccccCCCccccCceeEEechhhcchhhhccccccc---------
Confidence 999999888877778877663 577899999999999999999999987422
Q ss_pred CCCCCCCcccccccccccccccccCCccccccchhhccCCCCCccEEEEEEeeCCCCCCccccCCCCceeeeC-CcceEE
Q 036343 393 QAGNDQAPLQWKWRPEMINDFVVRGKGHFALNTLIDQKSTNDVSDYLWYMTNADLKDDDPILSGSSNMTLRIN-SSGQVL 471 (795)
Q Consensus 393 ~~~~~~~~l~~~w~~~~~e~~~~~~~~~~~~~~~~Eql~t~~~~GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~-~~~D~a 471 (795)
|.... |+++ +|..+ |.+||++|+|.++.+.++ ...|+|. +++|++
T Consensus 402 ------------~~~~~-e~~~------------~~~~~--~~~~~ll~~~~~t~d~sd-------~t~~~i~ls~g~~~ 447 (649)
T KOG0496|consen 402 ------------WISFT-EPIP------------SEAVG--QSFGGLLEQTNLTKDKSD-------TTSLKIPLSLGHAL 447 (649)
T ss_pred ------------ccccc-CCCc------------ccccc--CcceEEEEEEeeccccCC-------CceEeecccccceE
Confidence 43444 5543 35543 688999999999865544 2467888 999999
Q ss_pred EEEECCEEEEEEEcccCCCceeEeeeeeccCCccEEEEEEeecCcccccCCCcccCCCCCCCeEEEeecCCcceeecCCc
Q 036343 472 HAYVNGNYVDSQWTKYGASNDLFERPVKLTRGKNQISLLSATVGLQNYGSKFDMVPNGIPGPVLLVGRAGDETIIKDLSS 551 (795)
Q Consensus 472 ~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~n~L~ILVEn~GRvNyG~~l~~~~KGI~g~V~l~~~~g~~~~~~dL~~ 551 (795)
||||||+++|+++++.....+.+..++.|..|.|+|+|||||+||+||| +++++.|||+|+|+| +|. +|+++
T Consensus 448 hVfvNg~~~G~~~g~~~~~~~~~~~~~~l~~g~n~l~iL~~~~G~~n~G-~~e~~~~Gi~g~v~l---~g~----~~l~~ 519 (649)
T KOG0496|consen 448 HVFVNGEFAGSLHGNNEKIKLNLSQPVGLKAGENKLALLSENVGLPNYG-HFENDFKGILGPVYL---NGL----IDLTW 519 (649)
T ss_pred EEEECCEEeeeEeccccceeEEeecccccccCcceEEEEEEecCCCCcC-cccccccccccceEE---eee----eccce
Confidence 9999999999999876666677888888999999999999999999999 889999999999999 654 68888
Q ss_pred CccEEEecCCCccccccccccccCccCCCcCCCc-CCCccceEEEEEEEcCCCCCceEEEeCCceeEEEEEcCeeecccc
Q 036343 552 HKWTYKVGLYGLDDKKFYNAKAANSERGWSSKNV-PLNRRMTWYKTTFEAPLENDPVVLNLQGMGKGFAWVNGYNLGRYW 630 (795)
Q Consensus 552 ~~W~~~~~l~ge~~~~i~~~~~~~~~~~w~~~~~-~~~~~p~~yk~~F~~p~~~dp~~Ld~~g~gKG~vwVNG~nLGRYW 630 (795)
++|.|+++|.+|. +.++..+..+ .+.|..... +..+|.+||+ +|++|++.+||||||.|||||+|||||+||||||
T Consensus 520 ~~w~~~~gl~ge~-~~~~~~~~~~-~v~w~~~~~~~~k~P~~w~k-~f~~p~g~~~t~Ldm~g~GKG~vwVNG~niGRYW 596 (649)
T KOG0496|consen 520 TKWPYKVGLKGEK-LGLHTEEGSS-KVKWKKLSNTATKQPLTWYK-TFDIPSGSEPTALDMNGWGKGQVWVNGQNIGRYW 596 (649)
T ss_pred eecceecccccch-hhcccccccc-ccceeeccCcccCCCeEEEE-EecCCCCCCCeEEecCCCcceEEEECCccccccc
Confidence 8999999999998 8888777655 788987654 3346889998 9999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCcCCCCCCCCCcccCCCCCCceeEEecCcccccCCcceEEEEEeccCCCCceeeeeeeccccccccC
Q 036343 631 PTYLAEEDGCSTESCDYRGPYGSDKCAYNCGNPSQIWYHVPRSWIKDGVNTLVLFEEFGGNPSQINFQTVVVGTACGQAH 710 (795)
Q Consensus 631 ~~~~~~~~Gc~~~~~~~G~~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~IvvfEe~g~~p~~i~l~~~~~~~vC~~~~ 710 (795)
|++ | ||+++ |||++|||++.|.||||||+|++|..|+|+++.+..+|..+.
T Consensus 597 ~~~-----G-----------------------~Q~~y-hvPr~~Lk~~~N~lvvfEee~~~p~~i~~~~~~~~~~~~~v~ 647 (649)
T KOG0496|consen 597 PSF-----G-----------------------PQRTY-HVPRSWLKPSGNLLVVFEEEGGDPNGISFVTRPVLSTCAYVR 647 (649)
T ss_pred CCC-----C-----------------------CceEE-ECcHHHhCcCCceEEEEEeccCCCccceEEEeEeeeEeeecc
Confidence 877 4 86555 599999999999999999999999999999998888888765
Q ss_pred C
Q 036343 711 E 711 (795)
Q Consensus 711 E 711 (795)
|
T Consensus 648 ~ 648 (649)
T KOG0496|consen 648 E 648 (649)
T ss_pred c
Confidence 4
No 3
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=100.00 E-value=4.3e-89 Score=742.41 Aligned_cols=286 Identities=46% Similarity=0.871 Sum_probs=225.2
Q ss_pred eEEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEE
Q 036343 35 AITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVI 114 (795)
Q Consensus 35 ~~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vi 114 (795)
+|+|||||++|+|||+||||+|+++|+|+|+||||+|+|||+|||+||+|||+||+|||+|.+||++||++|+|+||+||
T Consensus 1 ~~~~~g~~~~~~~Ge~hy~r~p~~~W~~~l~k~ka~G~n~v~~yv~W~~he~~~g~~df~g~~dl~~f~~~a~~~gl~vi 80 (319)
T PF01301_consen 1 SFLIDGKPFFILSGEFHYFRIPPEYWRDRLQKMKAAGLNTVSTYVPWNLHEPEEGQFDFTGNRDLDRFLDLAQENGLYVI 80 (319)
T ss_dssp CEEETTEEE-EEEEEE-GGGS-GGGHHHHHHHHHHTT-SEEEEE--HHHHSSBTTB---SGGG-HHHHHHHHHHTT-EEE
T ss_pred CeEECCEEEEEEEeeeccccCChhHHHHHHHHHHhCCcceEEEeccccccCCCCCcccccchhhHHHHHHHHHHcCcEEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccC
Q 036343 115 LRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDY 194 (795)
Q Consensus 115 lrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~ 194 (795)
|||||||||||++||+|.||+++++++ +|++||.|+++|++|+++|+++++ ++|+++||||||+|||||||..
T Consensus 81 lrpGpyi~aE~~~gG~P~Wl~~~~~~~-~R~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GGpII~vQvENEyg~~---- 153 (319)
T PF01301_consen 81 LRPGPYICAEWDNGGLPAWLLRKPDIR-LRTNDPPFLEAVERWYRALAKIIK--PLQYTNGGPIIMVQVENEYGSY---- 153 (319)
T ss_dssp EEEES---TTBGGGG--GGGGGSTTS--SSSS-HHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEEESSSGGCT----
T ss_pred ecccceecccccchhhhhhhhcccccc-ccccchhHHHHHHHHHHHHHHHHH--hhhhcCCCceehhhhhhhhCCC----
Confidence 999999999999999999999999998 999999999999999999999999 8999999999999999999952
Q ss_pred CcccHHHHHHHHHHhhcCCCc-cceeeeCCC--------CCCC-CC-----CC-------------CCCCCCCceecccc
Q 036343 195 GDAGKSYINWCAKMATSLDIG-VPWIMCQES--------DAPS-PM-----FT-------------PNNPNSPKIWTENW 246 (795)
Q Consensus 195 ~~~~~~y~~~l~~~~~~~g~~-vp~~~~~~~--------~~~~-~~-----f~-------------~~~~~~P~~~~E~~ 246 (795)
.++++||+.|++++++.+++ +++++++.. +.++ .+ |. ..+|++|+|++|||
T Consensus 154 -~~~~~Y~~~l~~~~~~~g~~~~~~~t~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~P~~~~E~~ 232 (319)
T PF01301_consen 154 -GTDRAYMEALKDAYRDWGIDPVLLYTTDGPWGSWLPDGGLPGADIYATDNFPPGDNPDEYFGDQRSFQPNQPLMCTEFW 232 (319)
T ss_dssp -SS-HHHHHHHHHHHHHTT-SSSBEEEEESSSHCCHCCC-TTTGSCEEEEEETTTSSHHHHHHHHHHHHTTS--EEEEEE
T ss_pred -cccHhHHHHHHHHHHHhhCccceeeccCCCcccccccCCCCcceEEeccccCCCchHHHHHhhhhhcCCCCCeEEEEec
Confidence 38999999999999999998 667777642 1223 12 22 12478899999999
Q ss_pred cccccccCCCCCCCCHHHHHHHHHHHHHcCCeeeeeeeeeccCCCCCCCCCCCc----cccccCCCCCCcCCCCCChhHH
Q 036343 247 TGWFKSWGGKDPKRTAEDLAFAVARFFQFGGTFQNYYMYHGGTNFGRTSGGPYL----TTSYDYDAPIDEYGHLNQPKWG 322 (795)
Q Consensus 247 ~Gwf~~WG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~----~TSYDYdApl~E~G~~~tpKy~ 322 (795)
+|||++||++++.+++++++.+++++++.|.+ +||||||||||||+++|++.. +|||||||||+|+|++ ||||.
T Consensus 233 ~Gwf~~WG~~~~~~~~~~~~~~l~~~l~~g~~-~nyYM~hGGTNfG~~~ga~~~~~p~~TSYDY~ApI~E~G~~-~~Ky~ 310 (319)
T PF01301_consen 233 GGWFDHWGGPHYTRPAEDVAADLARMLSKGNS-LNYYMFHGGTNFGFWAGANYYGQPDITSYDYDAPIDEYGQL-TPKYY 310 (319)
T ss_dssp SS---BTTS--HHHHHHHHHHHHHHHHHHCSE-EEEEECE--B--TT-B-EETTTEEB-SB--TT-SB-TTS-B--HHHH
T ss_pred cccccccCCCCccCCHHHHHHHHHHHHHhhcc-cceeeccccCCccccccCCCCCCCCcccCCcCCccCcCCCc-CHHHH
Confidence 99999999999999999999999999999966 799999999999999986553 5999999999999998 79999
Q ss_pred HHHHHHHH
Q 036343 323 HLRELHKL 330 (795)
Q Consensus 323 ~lr~l~~~ 330 (795)
+||+||.+
T Consensus 311 ~lr~l~~~ 318 (319)
T PF01301_consen 311 ELRRLHQK 318 (319)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99999964
No 4
>COG1874 LacA Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-39 Score=373.05 Aligned_cols=279 Identities=25% Similarity=0.385 Sum_probs=215.7
Q ss_pred EEeeCceEEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEe-cccccccCCcCceeeccCchHHHHHHHHHH
Q 036343 29 VSHDGRAITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIET-YVFWNAHEPLRRQYDFTGNLDLIRFIKTIQ 107 (795)
Q Consensus 29 v~~~~~~~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~-yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~ 107 (795)
|+++..++++||+|++++||++||+|+|++.|.|||+|||++|+|+|++ |+.||.|||++|+|||+ .+|.. ||++|+
T Consensus 1 ~~~~~~~~~~dg~~~~l~gG~y~p~~~p~~~w~ddl~~mk~~G~N~V~ig~faW~~~eP~eG~fdf~-~~D~~-~l~~a~ 78 (673)
T COG1874 1 VSYDGYSFIRDGRRILLYGGDYYPERWPRETWMDDLRKMKALGLNTVRIGYFAWNLHEPEEGKFDFT-WLDEI-FLERAY 78 (673)
T ss_pred CcccccceeeCCceeEEeccccChHHCCHHHHHHHHHHHHHhCCCeeEeeeEEeeccCccccccCcc-cchHH-HHHHHH
Confidence 4578899999999999999999999999999999999999999999999 99999999999999999 78888 899999
Q ss_pred HcCcEEEEecCc-eeeeeeCCCCcccccccCCCcc-c-------ccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcE
Q 036343 108 DQGLYVILRIGP-YVCAEWNYGGFPVWLHNMPGIE-E-------LRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPI 178 (795)
Q Consensus 108 ~~gL~vilrpGP-yicaEw~~GG~P~WL~~~p~~~-~-------~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpI 178 (795)
+.||+||||||| ..|.+|..+++|+||..++.-. + +..+++-|++++++++..|.+++ +++|++|
T Consensus 79 ~~Gl~vil~t~P~g~~P~Wl~~~~PeiL~~~~~~~~~~~g~r~~~~~~~~~Yr~~~~~i~~~irer~------~~~~~~v 152 (673)
T COG1874 79 KAGLYVILRTGPTGAPPAWLAKKYPEILAVDENGRVRSDGARENICPVSPVYREYLDRILQQIRERL------YGNGPAV 152 (673)
T ss_pred hcCceEEEecCCCCCCchHHhcCChhheEecCCCcccCCCcccccccccHHHHHHHHHHHHHHHHHH------hccCCce
Confidence 999999999999 9999999999999998766532 0 22446778888888555554442 5789999
Q ss_pred EEeecccccccccccCCcccHHHHHHHHHHhhcC-CCccceeeeC---------CCCCCC-----C---C---CCCCCCC
Q 036343 179 ILAQIENEYGNVMSDYGDAGKSYINWCAKMATSL-DIGVPWIMCQ---------ESDAPS-----P---M---FTPNNPN 237 (795)
Q Consensus 179 I~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~-g~~vp~~~~~---------~~~~~~-----~---~---f~~~~~~ 237 (795)
|+||++||||++.+.+..|.+.+..||++.+-.. .+..+|=+.- +...|. + + +......
T Consensus 153 ~~w~~dneY~~~~~~~~~~~~~f~~wLk~~yg~l~~ln~~w~t~~ws~t~~~~~~i~~p~~~~e~~~~~~~ld~~~f~~e 232 (673)
T COG1874 153 ITWQNDNEYGGHPCYCDYCQAAFRLWLKKGYGSLDNLNEAWGTSFWSHTYKDFDEIMSPNPFGELPLPGLYLDYRRFESE 232 (673)
T ss_pred eEEEccCccCCccccccccHHHHHHHHHhCcchHHhhhhhhhhhhcccccccHHhhcCCCCccccCCccchhhHhhhhhh
Confidence 9999999999965555568899999999988421 1122321100 000000 0 0 1111122
Q ss_pred C----Cceecccccccc-cccCCCCCCCC-HHHHHHHHHHHHHcCCeeeeeeeeeccCCCC------CCCCCC---C---
Q 036343 238 S----PKIWTENWTGWF-KSWGGKDPKRT-AEDLAFAVARFFQFGGTFQNYYMYHGGTNFG------RTSGGP---Y--- 299 (795)
Q Consensus 238 ~----P~~~~E~~~Gwf-~~WG~~~~~~~-~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG------~~~G~~---~--- 299 (795)
+ +....|.|-+|| +.|..+.-... .+.-++.+++.|..+.+ -||||||+|++|+ +.+|+. +
T Consensus 233 ~~~~~~~~~~~~~~~~~P~~pvt~nl~~~~~~~~~~~~~~~ld~~sw-dny~~~~~~~~~~~~~h~l~r~~~~~~~~~~m 311 (673)
T COG1874 233 QILEFVREEGEAIKAYFPNRPVTPNLLAAFKKFDAYKWEKVLDFASW-DNYPAWHRGRDFTKFIHDLFRNGKQGQPFWLM 311 (673)
T ss_pred hhHHHHHHHHHHHHHhCCCCCCChhHhhhhhhcchHHHHHhcChhhh-hhhhhhccccchhhhhHHHHHhhccCCceeec
Confidence 2 666788899999 88877655444 44445667777777766 6999999999999 777653 2
Q ss_pred ----ccccccCCCCCCcCCCC
Q 036343 300 ----LTTSYDYDAPIDEYGHL 316 (795)
Q Consensus 300 ----~~TSYDYdApl~E~G~~ 316 (795)
..|+|++++.+.+.|..
T Consensus 312 e~~P~~vn~~~~n~~~~~G~~ 332 (673)
T COG1874 312 EQLPSVVNWALYNKLKRPGAL 332 (673)
T ss_pred cCCcchhhhhhccCCCCCccc
Confidence 57999999999999994
No 5
>PF02449 Glyco_hydro_42: Beta-galactosidase; InterPro: IPR013529 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This group of beta-galactosidase enzymes (3.2.1.23 from EC) belong to the glycosyl hydrolase 42 family GH42 from CAZY. The enzyme catalyses the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues.; GO: 0004565 beta-galactosidase activity, 0005975 carbohydrate metabolic process, 0009341 beta-galactosidase complex; PDB: 1KWK_A 1KWG_A 3U7V_A.
Probab=99.87 E-value=4.7e-22 Score=221.80 Aligned_cols=254 Identities=18% Similarity=0.264 Sum_probs=162.0
Q ss_pred eeCCCCCCCChHHHHHHHHHcCCCEEEe-cccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCC
Q 036343 50 IHYPRSTPGMWPDLIKKAKEGGLDAIET-YVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYG 128 (795)
Q Consensus 50 ~hy~r~~~~~W~~~l~k~ka~G~N~V~~-yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~G 128 (795)
+++..++++.|+++|++||++|+|+|++ .+.|+.+||+||+|||+ .||++|++|+++||+|||++. .+
T Consensus 2 y~pe~~~~e~~~~d~~~m~~~G~n~vri~~~~W~~lEP~eG~ydF~---~lD~~l~~a~~~Gi~viL~~~--------~~ 70 (374)
T PF02449_consen 2 YYPEQWPEEEWEEDLRLMKEAGFNTVRIGEFSWSWLEPEEGQYDFS---WLDRVLDLAAKHGIKVILGTP--------TA 70 (374)
T ss_dssp --GGGS-CCHHHHHHHHHHHHT-SEEEE-CCEHHHH-SBTTB---H---HHHHHHHHHHCTT-EEEEEEC--------TT
T ss_pred CCcccCCHHHHHHHHHHHHHcCCCEEEEEEechhhccCCCCeeecH---HHHHHHHHHHhccCeEEEEec--------cc
Confidence 5677889999999999999999999996 67899999999999999 899999999999999999975 67
Q ss_pred Cccccccc-CCCccc---------------ccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccc
Q 036343 129 GFPVWLHN-MPGIEE---------------LRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMS 192 (795)
Q Consensus 129 G~P~WL~~-~p~~~~---------------~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~ 192 (795)
..|.||.+ +|++.. ...++|.|++++++++++|+++++++| .||++||+||+|...
T Consensus 71 ~~P~Wl~~~~Pe~~~~~~~g~~~~~g~~~~~~~~~p~yr~~~~~~~~~l~~~y~~~p-------~vi~~~i~NE~~~~~- 142 (374)
T PF02449_consen 71 APPAWLYDKYPEILPVDADGRRRGFGSRQHYCPNSPAYREYARRFIRALAERYGDHP-------AVIGWQIDNEPGYHR- 142 (374)
T ss_dssp TS-HHHHCCSGCCC-B-TTTSBEECCCSTT-HCCHHHHHHHHHHHHHHHHHHHTTTT-------TEEEEEECCSTTCTS-
T ss_pred ccccchhhhcccccccCCCCCcCccCCccccchhHHHHHHHHHHHHHHHHhhccccc-------eEEEEEeccccCcCc-
Confidence 89999975 787652 124568999999999999999998654 799999999999752
Q ss_pred cCC-cccHHHHHHHHHHhhcC-------C-------------CccceeeeC-----------------------------
Q 036343 193 DYG-DAGKSYINWCAKMATSL-------D-------------IGVPWIMCQ----------------------------- 222 (795)
Q Consensus 193 ~~~-~~~~~y~~~l~~~~~~~-------g-------------~~vp~~~~~----------------------------- 222 (795)
.|+ .+.++|.+||++++... | +..|..+..
T Consensus 143 ~~~~~~~~~f~~wLk~kY~ti~~LN~aWgt~~ws~~~~~f~~v~~P~~~~~~~~~~~~~D~~rF~~~~~~~~~~~~~~~i 222 (374)
T PF02449_consen 143 CYSPACQAAFRQWLKEKYGTIEALNRAWGTAFWSQRYSSFDEVPPPRPTSSPENPAQWLDWYRFQSDRVAEFFRWQADII 222 (374)
T ss_dssp --SHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGG---SSGGG---S-S-SS---HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHhCCHHHHHHHHcCCcccCccCcHHhcCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 244 36788999999998741 1 111222110
Q ss_pred --------------CC--CCCC--------CC-------C--------------------CCCCCCCCceeccccccccc
Q 036343 223 --------------ES--DAPS--------PM-------F--------------------TPNNPNSPKIWTENWTGWFK 251 (795)
Q Consensus 223 --------------~~--~~~~--------~~-------f--------------------~~~~~~~P~~~~E~~~Gwf~ 251 (795)
+. ...+ .+ . +....++|.+++|..+| -.
T Consensus 223 r~~~p~~~vt~n~~~~~~~~~d~~~~a~~~D~~~~d~Y~~~~~~~~~~~~~~~a~~~dl~R~~~~~kpf~v~E~~~g-~~ 301 (374)
T PF02449_consen 223 REYDPDHPVTTNFMGSWFNGIDYFKWAKYLDVVSWDSYPDGSFDFYDDDPYSLAFNHDLMRSLAKGKPFWVMEQQPG-PV 301 (374)
T ss_dssp HHHSTT-EEE-EE-TT---SS-HHHHGGGSSSEEEEE-HHHHHTTTT--TTHHHHHHHHHHHHTTT--EEEEEE--S---
T ss_pred HHhCCCceEEeCccccccCcCCHHHHHhhCCcceeccccCcccCCCCCCHHHHHHHHHHHHhhcCCCceEeecCCCC-CC
Confidence 00 0000 00 0 01137889999999998 66
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHcCCeeeeeeeeeccCCCCCCCCCCCccccccCCCCCCcCCCCCChhHHHHHHHHHHH
Q 036343 252 SWGGKDPKRTAEDLAFAVARFFQFGGTFQNYYMYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLRELHKLL 331 (795)
Q Consensus 252 ~WG~~~~~~~~~~~~~~~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~tpKy~~lr~l~~~l 331 (795)
.|+.......+..+....-.-++.|+..+.|+=+ ....+|.-.. ..+.|+-+|...+++|.+++++...|
T Consensus 302 ~~~~~~~~~~pg~~~~~~~~~~A~Ga~~i~~~~w-r~~~~g~E~~---------~~g~~~~dg~~~~~~~~e~~~~~~~l 371 (374)
T PF02449_consen 302 NWRPYNRPPRPGELRLWSWQAIAHGADGILFWQW-RQSRFGAEQF---------HGGLVDHDGREPTRRYREVAQLGREL 371 (374)
T ss_dssp SSSSS-----TTHHHHHHHHHHHTT-S-EEEC-S-B--SSSTTTT---------S--SB-TTS--B-HHHHHHHHHHHHH
T ss_pred CCccCCCCCCCCHHHHHHHHHHHHhCCeeEeeec-cCCCCCchhh---------hcccCCccCCCCCcHHHHHHHHHHHH
Confidence 6766555555566665555678899988776655 3334442221 13678889933589999999998876
Q ss_pred Hh
Q 036343 332 KS 333 (795)
Q Consensus 332 ~~ 333 (795)
+.
T Consensus 372 ~~ 373 (374)
T PF02449_consen 372 KK 373 (374)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 6
>PF02140 Gal_Lectin: Galactose binding lectin domain; InterPro: IPR000922 The D-galactoside binding lectin purified from sea urchin (Anthocidaris crassispina) eggs exists as a disulphide-linked homodimer of two subunits; the dimeric form is essential for hemagglutination activity []. The sea urchin egg lectin (SUEL) forms a new class of lectins. Although SUEL was first isolated as a D-galactoside binding lectin, it was latter shown that it bind to L-rhamnose preferentially [, ]. L-rhamnose and D-galactose share the same hydroxyl group orientation at C2 and C4 of the pyranose ring structure. A cysteine-rich domain homologous to the SUEL protein has been identified in the following proteins [, , ]: Plant beta-galactosidases (3.2.1.23 from EC) (lactases). Mammalian latrophilin, the calcium independent receptor of alpha-latrotoxin (CIRL). The galactose-binding lectin domain is not required for alpha-latratoxin binding []. Human lectomedin-1. Rhamnose-binding lectin (SAL) from catfish (Silurus asotus, Namazu) eggs. This protein is composed of three tandem repeat domains homologous to the SUEL lectin domain. All cysteine positions of each domain are completely conserved []. The hypothetical B0457.1, F32A7.3A and F32A7.3B proteins from Caenorhabditis elegans. The human KIAA0821 protein. ; GO: 0005529 sugar binding; PDB: 2JXA_A 2JX9_A 2ZX2_A 2ZX3_B 2ZX0_B 2ZX1_B 2ZX4_B.
Probab=99.74 E-value=8.3e-19 Score=153.91 Aligned_cols=75 Identities=36% Similarity=0.746 Sum_probs=59.4
Q ss_pred EeeC-CeeEeEEeeeecCCCC-CCCCCc---ccccccCCCCchHHHHhhCCCCCccEEEecCCCcCCCCCCCCCeeEEEE
Q 036343 717 LTCH-GRRISEIKYASFGDPQ-GACGAF---KKGSCEAEIDVLPLIEKQCVGKKSCSIEASEANLGATSCAAGTVKRLVV 791 (795)
Q Consensus 717 L~C~-g~~I~~I~~A~YGr~~-~~C~~~---~~~~C~~~~~s~~~v~~~C~Gk~~C~v~as~~~fg~DPC~~gt~KyL~v 791 (795)
|+|+ |++| .|.+|+|||+. .+|+.. ...+|+++ +++++|+++|+||++|.|.+++.+|| |||+ |++|||+|
T Consensus 1 L~C~~g~~I-~I~~A~YGR~~~~~C~~~~~~~~~~C~~~-~~~~~v~~~C~g~~~C~v~~~~~~f~-dpC~-~~~KyL~V 76 (80)
T PF02140_consen 1 LSCPPGKVI-SIDSAFYGRTSSSICPSSSSGSNTNCSAP-DALSIVKERCNGKQSCSVPADNSVFG-DPCP-GTSKYLEV 76 (80)
T ss_dssp EE-STTEEE-EEEEEEEEBSSSSTT--GGGCS-TTB--T-THHHHHHHHHTTBSEEEEESSHHHH---SST-TS--EEEE
T ss_pred CCCcCCCEE-EEEEeecCCCCCCCCcCCCcCCCCccccc-cccchhHHhCCCCCccEEEeccCccC-CCCC-CCCeEEEE
Confidence 7999 8666 69999999976 589733 34579999 99999999999999999999999998 9999 99999999
Q ss_pred EEEC
Q 036343 792 EALC 795 (795)
Q Consensus 792 ~y~C 795 (795)
+|+|
T Consensus 77 ~Y~C 80 (80)
T PF02140_consen 77 TYTC 80 (80)
T ss_dssp EEEE
T ss_pred EEEC
Confidence 9998
No 7
>KOG4729 consensus Galactoside-binding lectin [General function prediction only]
Probab=99.73 E-value=4e-18 Score=175.49 Aligned_cols=86 Identities=23% Similarity=0.526 Sum_probs=77.5
Q ss_pred cccCCCCeeEEeeC-CeeEeEEeeeecCCCC-CCCCC----cccccccCCCCchHHHHhhCCCCCccEEEecCCCcCCCC
Q 036343 707 GQAHENKTMELTCH-GRRISEIKYASFGDPQ-GACGA----FKKGSCEAEIDVLPLIEKQCVGKKSCSIEASEANLGATS 780 (795)
Q Consensus 707 ~~~~E~~~~~L~C~-g~~I~~I~~A~YGr~~-~~C~~----~~~~~C~~~~~s~~~v~~~C~Gk~~C~v~as~~~fg~DP 780 (795)
..+|||+.++|+|| |.+|+ |+.|+|||.. ..|.+ ..+.+|..+ .|++++.++|+++++|.|.+..++|+.||
T Consensus 38 ~~aCdG~~i~L~CP~~dvIs-v~sanYGR~~~~iC~pd~~~~~Si~C~~p-~s~~i~~~rCnnr~~C~vvv~s~~F~~DP 115 (265)
T KOG4729|consen 38 EYACDGERITLSCPRGDVIS-VQSANYGRFSDKICDPDPGREESINCYLP-KSFSILSSRCNNRRQCTVVVDSDVFGDDP 115 (265)
T ss_pred EEeecCceEEEEcCCCCEEE-EEecccCcccccccCCccccccchhccCh-HHHHHHHHhcCCCceEEEEecCCccCCCC
Confidence 45679999999999 87775 9999999964 68953 235789999 99999999999999999999999999999
Q ss_pred CCCCCeeEEEEEEEC
Q 036343 781 CAAGTVKRLVVEALC 795 (795)
Q Consensus 781 C~~gt~KyL~v~y~C 795 (795)
|| ||+|||+|.|.|
T Consensus 116 CP-gT~KYLev~Y~C 129 (265)
T KOG4729|consen 116 CP-GTSKYLEVQYGC 129 (265)
T ss_pred CC-CchhheEEEecc
Confidence 99 999999999998
No 8
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=99.05 E-value=2.5e-09 Score=116.01 Aligned_cols=149 Identities=19% Similarity=0.216 Sum_probs=106.9
Q ss_pred EEeeCceEEECCeEEEEEEEEeeCCC------CCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHH
Q 036343 29 VSHDGRAITIDGERKILLSGSIHYPR------STPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRF 102 (795)
Q Consensus 29 v~~~~~~~~idG~p~~~~sG~~hy~r------~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~f 102 (795)
|.+.++.|+|||||+.+-+...|... .+++.|+.+|++||++|+|+|++ .|-|. =.+|
T Consensus 1 vev~~~~~~lNGk~~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~~G~N~iR~-----~h~p~-----------~~~~ 64 (298)
T PF02836_consen 1 VEVKDGGFYLNGKPIFLRGVNRHQDYPGLGRAMPDEAMERDLELMKEMGFNAIRT-----HHYPP-----------SPRF 64 (298)
T ss_dssp EEEETTEEEETTEEE-EEEEEE-S-BTTTBT---HHHHHHHHHHHHHTT-SEEEE-----TTS-------------SHHH
T ss_pred CEEECCEEEECCEEEEEEEEeeCcCcccccccCCHHHHHHHHHHHHhcCcceEEc-----ccccC-----------cHHH
Confidence 67889999999999999999999643 36788999999999999999999 34332 2678
Q ss_pred HHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEee
Q 036343 103 IKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQ 182 (795)
Q Consensus 103 l~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Q 182 (795)
+++|.++||.|+--+. ..+.=.|-... ... ....||.+.+.+.+-+++++++.++|| .||||=
T Consensus 65 ~~~cD~~GilV~~e~~--------~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~v~~~~NHP-------SIi~W~ 127 (298)
T PF02836_consen 65 YDLCDELGILVWQEIP--------LEGHGSWQDFG-NCN-YDADDPEFRENAEQELREMVRRDRNHP-------SIIMWS 127 (298)
T ss_dssp HHHHHHHT-EEEEE-S---------BSCTSSSSTS-CTS-CTTTSGGHHHHHHHHHHHHHHHHTT-T-------TEEEEE
T ss_pred HHHHhhcCCEEEEecc--------ccccCccccCC-ccc-cCCCCHHHHHHHHHHHHHHHHcCcCcC-------chheee
Confidence 9999999999987652 11221222111 111 467899999999999999999999887 699999
Q ss_pred cccccccccccCCcccHHHHHHHHHHhhcCCCcccee
Q 036343 183 IENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWI 219 (795)
Q Consensus 183 iENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~ 219 (795)
+-||-. ...+++.|.+++++..-+=|+.
T Consensus 128 ~gNE~~---------~~~~~~~l~~~~k~~DptRpv~ 155 (298)
T PF02836_consen 128 LGNESD---------YREFLKELYDLVKKLDPTRPVT 155 (298)
T ss_dssp EEESSH---------HHHHHHHHHHHHHHH-TTSEEE
T ss_pred cCccCc---------cccchhHHHHHHHhcCCCCcee
Confidence 999983 3567888999998866554543
No 9
>PRK10150 beta-D-glucuronidase; Provisional
Probab=98.92 E-value=1.6e-07 Score=111.79 Aligned_cols=157 Identities=15% Similarity=0.106 Sum_probs=112.8
Q ss_pred eeEEeeCceEEECCeEEEEEEEEeeCCC------CCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHH
Q 036343 27 YRVSHDGRAITIDGERKILLSGSIHYPR------STPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLI 100 (795)
Q Consensus 27 ~~v~~~~~~~~idG~p~~~~sG~~hy~r------~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 100 (795)
++|++++..|+|||+|+++-+...|... ++++.|+.+|+.||++|+|+|++- |-|. =.
T Consensus 276 R~i~~~~~~f~lNG~pv~lrG~~~h~~~~~~G~a~~~~~~~~d~~l~K~~G~N~vR~s-----h~p~-----------~~ 339 (604)
T PRK10150 276 RSVAVKGGQFLINGKPFYFKGFGKHEDADIRGKGLDEVLNVHDHNLMKWIGANSFRTS-----HYPY-----------SE 339 (604)
T ss_pred EEEEEeCCEEEECCEEEEEEeeeccCCCCccCCcCCHHHHHHHHHHHHHCCCCEEEec-----cCCC-----------CH
Confidence 4688899999999999999998888432 466779999999999999999992 4332 24
Q ss_pred HHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc-------c-CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccc
Q 036343 101 RFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH-------N-MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFA 172 (795)
Q Consensus 101 ~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~-------~-~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~ 172 (795)
+|+++|-++||+|+--.. .-|+..|.. + .+.-. .-..+|.+.++..+-+++++++.++||
T Consensus 340 ~~~~~cD~~GllV~~E~p--------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~mv~r~~NHP--- 407 (604)
T PRK10150 340 EMLDLADRHGIVVIDETP--------AVGLNLSFGAGLEAGNKPKETYS-EEAVNGETQQAHLQAIRELIARDKNHP--- 407 (604)
T ss_pred HHHHHHHhcCcEEEEecc--------ccccccccccccccccccccccc-ccccchhHHHHHHHHHHHHHHhccCCc---
Confidence 789999999999987642 112222221 1 11111 123457788888888888888888776
Q ss_pred cCCCcEEEeecccccccccccCCcccHHHHHHHHHHhhcCCCcccee
Q 036343 173 SQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWI 219 (795)
Q Consensus 173 ~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~ 219 (795)
.||||-|-||.... ......|++.|.+.+++..-+=|+.
T Consensus 408 ----SIi~Ws~gNE~~~~----~~~~~~~~~~l~~~~k~~DptR~vt 446 (604)
T PRK10150 408 ----SVVMWSIANEPASR----EQGAREYFAPLAELTRKLDPTRPVT 446 (604)
T ss_pred ----eEEEEeeccCCCcc----chhHHHHHHHHHHHHHhhCCCCceE
Confidence 69999999997532 1134578888888888876554543
No 10
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 5 GH5 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); beta-mannanase (3.2.1.78 from EC); exo-1,3-glucanase (3.2.1.58 from EC); endo-1,6-glucanase (3.2.1.75 from EC); xylanase (3.2.1.8 from EC); endoglycoceramidase (3.2.1.123 from EC). The microbial degradation of cellulose and xylans requires several types of enzymes. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family A [] or as the glycosyl hydrolases family 5 []. One of the conserved regions in this family contains a conserved glutamic acid residue which is potentially involved [] in the catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3NDY_A 3NDZ_B 1LF1_A 1TVP_B 1TVN_A 3AYR_A 3AYS_A 1QI0_A 1W3K_A 1OCQ_A ....
Probab=98.88 E-value=2.6e-08 Score=105.64 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=109.8
Q ss_pred CCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccC-CcCce-eeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 39 DGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHE-PLRRQ-YDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 39 dG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hE-p~~G~-~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
+|+++.+.+-+.|.... ..-++.+++||++|+|+||+.|.|...+ |.++. ++=+....|+++|+.|+++||+|||.
T Consensus 4 ~G~~v~~~G~n~~w~~~--~~~~~~~~~~~~~G~n~VRi~v~~~~~~~~~~~~~~~~~~~~~ld~~v~~a~~~gi~vild 81 (281)
T PF00150_consen 4 NGKPVNWRGFNTHWYNP--SITEADFDQLKALGFNTVRIPVGWEAYQEPNPGYNYDETYLARLDRIVDAAQAYGIYVILD 81 (281)
T ss_dssp TSEBEEEEEEEETTSGG--GSHHHHHHHHHHTTESEEEEEEESTSTSTTSTTTSBTHHHHHHHHHHHHHHHHTT-EEEEE
T ss_pred CCCeEEeeeeecccCCC--CCHHHHHHHHHHCCCCEEEeCCCHHHhcCCCCCccccHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 69999999999993221 2778999999999999999999995554 67764 77677789999999999999999987
Q ss_pred cCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccccccccccc--C
Q 036343 117 IGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSD--Y 194 (795)
Q Consensus 117 pGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~--~ 194 (795)
+- ..|.|....... ...+...+....+++.|+.+++.+ .+|++++|=||....... .
T Consensus 82 ~h----------~~~~w~~~~~~~----~~~~~~~~~~~~~~~~la~~y~~~-------~~v~~~el~NEP~~~~~~~~w 140 (281)
T PF00150_consen 82 LH----------NAPGWANGGDGY----GNNDTAQAWFKSFWRALAKRYKDN-------PPVVGWELWNEPNGGNDDANW 140 (281)
T ss_dssp EE----------ESTTCSSSTSTT----TTHHHHHHHHHHHHHHHHHHHTTT-------TTTEEEESSSSGCSTTSTTTT
T ss_pred ec----------cCcccccccccc----ccchhhHHHHHhhhhhhccccCCC-------CcEEEEEecCCccccCCcccc
Confidence 52 227774322111 222334455556777777777633 479999999999864210 0
Q ss_pred C----cccHHHHHHHHHHhhcCCCccceee
Q 036343 195 G----DAGKSYINWCAKMATSLDIGVPWIM 220 (795)
Q Consensus 195 ~----~~~~~y~~~l~~~~~~~g~~vp~~~ 220 (795)
. ..=.++.+.+.+.+|+.+.+.+++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~Ir~~~~~~~i~~ 170 (281)
T PF00150_consen 141 NAQNPADWQDWYQRAIDAIRAADPNHLIIV 170 (281)
T ss_dssp SHHHTHHHHHHHHHHHHHHHHTTSSSEEEE
T ss_pred ccccchhhhhHHHHHHHHHHhcCCcceeec
Confidence 0 0114566666777777776655544
No 11
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A.
Probab=98.85 E-value=6.3e-09 Score=97.23 Aligned_cols=72 Identities=35% Similarity=0.754 Sum_probs=50.8
Q ss_pred ccceEEEEEEEcCCCCCceE-EEe--CCceeEEEEEcCeeecccccccccccCCCCCCCcCCCCCCCCCcccCCCCCCce
Q 036343 589 RRMTWYKTTFEAPLENDPVV-LNL--QGMGKGFAWVNGYNLGRYWPTYLAEEDGCSTESCDYRGPYGSDKCAYNCGNPSQ 665 (795)
Q Consensus 589 ~~p~~yk~~F~~p~~~dp~~-Ld~--~g~gKG~vwVNG~nLGRYW~~~~~~~~Gc~~~~~~~G~~~~~~~~~~~~~~PQq 665 (795)
.+..|||++|........+. |+. ....+.+|||||++|||||+.+ | ||+
T Consensus 34 ~g~~~Yrg~F~~~~~~~~~~~l~~~~g~~~~~~vwVNG~~~G~~~~~~-----g-----------------------~q~ 85 (111)
T PF13364_consen 34 AGYLWYRGTFTGTGQDTSLTPLNIQGGNAFRASVWVNGWFLGSYWPGI-----G-----------------------PQT 85 (111)
T ss_dssp SCEEEEEEEEETTTEEEEEE-EEECSSTTEEEEEEETTEEEEEEETTT-----E-----------------------CCE
T ss_pred CCCEEEEEEEeCCCcceeEEEEeccCCCceEEEEEECCEEeeeecCCC-----C-----------------------ccE
Confidence 46799999996421111233 343 3578999999999999999655 3 999
Q ss_pred eEEecCcccccCCcceEEEE-Eecc
Q 036343 666 IWYHVPRSWIKDGVNTLVLF-EEFG 689 (795)
Q Consensus 666 tlY~VP~~~Lk~g~N~Ivvf-Ee~g 689 (795)
+++ ||..+|+.++|.|+|+ +..|
T Consensus 86 tf~-~p~~il~~~n~v~~vl~~~~g 109 (111)
T PF13364_consen 86 TFS-VPAGILKYGNNVLVVLWDNMG 109 (111)
T ss_dssp EEE-E-BTTBTTCEEEEEEEEE-ST
T ss_pred EEE-eCceeecCCCEEEEEEEeCCC
Confidence 999 9999999885665555 4443
No 12
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=98.56 E-value=1.1e-06 Score=110.11 Aligned_cols=248 Identities=17% Similarity=0.134 Sum_probs=149.3
Q ss_pred eeEEeeCceEEECCeEEEEEEEEeeCCC------CCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHH
Q 036343 27 YRVSHDGRAITIDGERKILLSGSIHYPR------STPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLI 100 (795)
Q Consensus 27 ~~v~~~~~~~~idG~p~~~~sG~~hy~r------~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 100 (795)
++|++++..|+|||+|+++-+...|-.. ++++.|+.+|+.||++|+|+|++- |-|. =.
T Consensus 318 R~iei~~~~f~lNGkpi~lrGvnrh~~~p~~G~a~~~e~~~~dl~lmK~~g~NavR~s-----HyP~-----------~~ 381 (1021)
T PRK10340 318 RDIKVRDGLFWINNRYVKLHGVNRHDNDHRKGRAVGMDRVEKDIQLMKQHNINSVRTA-----HYPN-----------DP 381 (1021)
T ss_pred EEEEEECCEEEECCEEEEEEEeecCCCCcccCccCCHHHHHHHHHHHHHCCCCEEEec-----CCCC-----------CH
Confidence 4578889999999999999999888332 367889999999999999999983 4332 24
Q ss_pred HHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEE
Q 036343 101 RFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIIL 180 (795)
Q Consensus 101 ~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~ 180 (795)
+|+++|-++||+|+--. |..|. |++ .. .+.. .-+++|.|.++..+=+++++++.++|| .|||
T Consensus 382 ~fydlcDe~GllV~dE~-~~e~~-----g~~--~~--~~~~-~~~~~p~~~~~~~~~~~~mV~RdrNHP-------SIi~ 443 (1021)
T PRK10340 382 RFYELCDIYGLFVMAET-DVESH-----GFA--NV--GDIS-RITDDPQWEKVYVDRIVRHIHAQKNHP-------SIII 443 (1021)
T ss_pred HHHHHHHHCCCEEEECC-ccccc-----Ccc--cc--cccc-cccCCHHHHHHHHHHHHHHHHhCCCCC-------EEEE
Confidence 78999999999998765 22222 221 00 1111 225677787766555777888877666 6999
Q ss_pred eecccccccccccCCcccHHHHHHHHHHhhcCCCccceeeeCCCCCC--CCC-------------CCCCCCCCCceeccc
Q 036343 181 AQIENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPWIMCQESDAP--SPM-------------FTPNNPNSPKIWTEN 245 (795)
Q Consensus 181 ~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~--~~~-------------f~~~~~~~P~~~~E~ 245 (795)
|=+-||-+. |. .++.+.+.+++..-+=|+ +..+.... ..+ +....+++|.+.+||
T Consensus 444 WslGNE~~~-----g~----~~~~~~~~~k~~DptR~v-~~~~~~~~~~~Dv~~~~Y~~~~~~~~~~~~~~~kP~i~~Ey 513 (1021)
T PRK10340 444 WSLGNESGY-----GC----NIRAMYHAAKALDDTRLV-HYEEDRDAEVVDVISTMYTRVELMNEFGEYPHPKPRILCEY 513 (1021)
T ss_pred EECccCccc-----cH----HHHHHHHHHHHhCCCceE-EeCCCcCccccceeccccCCHHHHHHHHhCCCCCcEEEEch
Confidence 999999763 31 235666777765544333 33321111 011 112235789999998
Q ss_pred ccccccccCCCCCCCCHHHHHHHHHH-----------HHHcCC-----eeeeeeeeeccCCCCCCCCCCCccccccCCCC
Q 036343 246 WTGWFKSWGGKDPKRTAEDLAFAVAR-----------FFQFGG-----TFQNYYMYHGGTNFGRTSGGPYLTTSYDYDAP 309 (795)
Q Consensus 246 ~~Gwf~~WG~~~~~~~~~~~~~~~~~-----------~l~~g~-----s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdAp 309 (795)
--. .|.. ....++.-..+.+ +...|. .. .-|+.+||- ||-+. . ..++--+.-
T Consensus 514 ~ha----mgn~--~g~~~~yw~~~~~~p~l~GgfiW~~~D~~~~~~~~~G-~~~~~ygGd-~g~~p---~-~~~f~~~Gl 581 (1021)
T PRK10340 514 AHA----MGNG--PGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDNG-NVWYKYGGD-YGDYP---N-NYNFCIDGL 581 (1021)
T ss_pred Hhc----cCCC--CCCHHHHHHHHHhCCceeEEeeeecCcccccccCCCC-CEEEEECCC-CCCCC---C-CcCccccee
Confidence 421 1211 0112333322221 011100 00 124455553 55321 1 122333467
Q ss_pred CCcCCCCCChhHHHHHHHHHHH
Q 036343 310 IDEYGHLNQPKWGHLRELHKLL 331 (795)
Q Consensus 310 l~E~G~~~tpKy~~lr~l~~~l 331 (795)
++-+|.+ .|.|...|.+.+-+
T Consensus 582 v~~dr~p-~p~~~e~k~~~~pv 602 (1021)
T PRK10340 582 IYPDQTP-GPGLKEYKQVIAPV 602 (1021)
T ss_pred ECCCCCC-ChhHHHHHHhcceE
Confidence 8888986 89999999887654
No 13
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=98.47 E-value=2e-06 Score=107.62 Aligned_cols=124 Identities=19% Similarity=0.254 Sum_probs=94.5
Q ss_pred eeEEeeCceEEECCeEEEEEEEEeeCC------CCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHH
Q 036343 27 YRVSHDGRAITIDGERKILLSGSIHYP------RSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLI 100 (795)
Q Consensus 27 ~~v~~~~~~~~idG~p~~~~sG~~hy~------r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 100 (795)
++|++++..|+|||+|+++-+...|-. +++++.++.+|+.||++|+|+|++- |-|. =.
T Consensus 334 R~iei~~~~f~LNGkpi~lrGvn~h~~~p~~G~a~t~e~~~~di~lmK~~g~NaVR~s-----HyP~-----------~p 397 (1027)
T PRK09525 334 RKVEIENGLLKLNGKPLLIRGVNRHEHHPEHGQVMDEETMVQDILLMKQHNFNAVRCS-----HYPN-----------HP 397 (1027)
T ss_pred EEEEEECCEEEECCEEEEEEEeEccccCcccCccCCHHHHHHHHHHHHHCCCCEEEec-----CCCC-----------CH
Confidence 457788899999999999999998832 2578889999999999999999992 4332 25
Q ss_pred HHHHHHHHcCcEEEEecCceeeeeeCCCCc-ccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEE
Q 036343 101 RFIKTIQDQGLYVILRIGPYVCAEWNYGGF-PVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPII 179 (795)
Q Consensus 101 ~fl~~a~~~gL~vilrpGPyicaEw~~GG~-P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII 179 (795)
+|+++|-++||+|+--.. . | ..|+ |. + . -.+||.|.+++.+=+++++.+.++|| -||
T Consensus 398 ~fydlcDe~GilV~dE~~-~---e--~hg~~~~------~-~--~~~dp~~~~~~~~~~~~mV~RdrNHP-------SIi 455 (1027)
T PRK09525 398 LWYELCDRYGLYVVDEAN-I---E--THGMVPM------N-R--LSDDPRWLPAMSERVTRMVQRDRNHP-------SII 455 (1027)
T ss_pred HHHHHHHHcCCEEEEecC-c---c--ccCCccc------c-C--CCCCHHHHHHHHHHHHHHHHhCCCCC-------EEE
Confidence 789999999999987742 1 1 1111 11 0 0 14578888877777788888888776 699
Q ss_pred Eeecccccc
Q 036343 180 LAQIENEYG 188 (795)
Q Consensus 180 ~~QiENEyg 188 (795)
||=+-||-|
T Consensus 456 ~WSlgNE~~ 464 (1027)
T PRK09525 456 IWSLGNESG 464 (1027)
T ss_pred EEeCccCCC
Confidence 999999976
No 14
>COG3250 LacZ Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]
Probab=98.37 E-value=4.8e-06 Score=101.07 Aligned_cols=137 Identities=20% Similarity=0.261 Sum_probs=106.8
Q ss_pred eeEEeeCceEEECCeEEEEEEEEeeCCCC-----C-CCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHH
Q 036343 27 YRVSHDGRAITIDGERKILLSGSIHYPRS-----T-PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLI 100 (795)
Q Consensus 27 ~~v~~~~~~~~idG~p~~~~sG~~hy~r~-----~-~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~ 100 (795)
++|+++++.|.|||||+++-+..-|.+-. . .+.-+++|++||++|+|+|+|- |-|+ =.
T Consensus 284 R~iei~~~~~~iNGkpvf~kGvnrHe~~~~~G~~~~~~~~~~dl~lmk~~n~N~vRts-----HyP~-----------~~ 347 (808)
T COG3250 284 RTVEIKDGLLLINGKPVFIRGVNRHEDDPILGRVTDEDAMERDLKLMKEANMNSVRTS-----HYPN-----------SE 347 (808)
T ss_pred EEEEEECCeEEECCeEEEEeeeecccCCCccccccCHHHHHHHHHHHHHcCCCEEEec-----CCCC-----------CH
Confidence 56899999999999999999999996542 3 3337899999999999999996 6554 36
Q ss_pred HHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEE
Q 036343 101 RFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIIL 180 (795)
Q Consensus 101 ~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~ 180 (795)
+|++||.++||+||--+- .||- |. .+|+.|++.+..=+++++++.++|| .|||
T Consensus 348 ~~ydLcDelGllV~~Ea~----~~~~--~~--------------~~~~~~~k~~~~~i~~mver~knHP-------SIii 400 (808)
T COG3250 348 EFYDLCDELGLLVIDEAM----IETH--GM--------------PDDPEWRKEVSEEVRRMVERDRNHP-------SIII 400 (808)
T ss_pred HHHHHHHHhCcEEEEecc----hhhc--CC--------------CCCcchhHHHHHHHHHHHHhccCCC-------cEEE
Confidence 789999999999998851 2221 12 2678899999888999999999776 6999
Q ss_pred eecccccccccccCCcccHHHHHHHHHHhhc
Q 036343 181 AQIENEYGNVMSDYGDAGKSYINWCAKMATS 211 (795)
Q Consensus 181 ~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~ 211 (795)
|=+-||-|. |.....-..|.++.-..
T Consensus 401 Ws~gNE~~~-----g~~~~~~~~~~k~~d~~ 426 (808)
T COG3250 401 WSLGNESGH-----GSNHWALYRWFKASDPT 426 (808)
T ss_pred EeccccccC-----ccccHHHHHHHhhcCCc
Confidence 999999874 33445555666665444
No 15
>PF13364 BetaGal_dom4_5: Beta-galactosidase jelly roll domain; PDB: 1TG7_A 1XC6_A 3OGS_A 3OGV_A 3OGR_A 3OG2_A.
Probab=98.28 E-value=2.6e-06 Score=79.68 Aligned_cols=78 Identities=27% Similarity=0.472 Sum_probs=52.9
Q ss_pred CCCCccEEEEEEeeCCCCCCccccCCCCce-eeeC-CcceEEEEEECCEEEEEEEcccCCCceeEeeeee-ccCCccEEE
Q 036343 432 TNDVSDYLWYMTNADLKDDDPILSGSSNMT-LRIN-SSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVK-LTRGKNQIS 508 (795)
Q Consensus 432 t~~~~GYl~Y~T~i~~~~~~~~~~~~~~~~-L~i~-~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~-l~~g~n~L~ 508 (795)
.++..|++|||+++...+.+. ... |.+. +.+++++|||||+++|+.....+ ++.+++.|.. |+.++++|.
T Consensus 30 ~g~~~g~~~Yrg~F~~~~~~~------~~~~l~~~~g~~~~~~vwVNG~~~G~~~~~~g-~q~tf~~p~~il~~~n~v~~ 102 (111)
T PF13364_consen 30 YGFHAGYLWYRGTFTGTGQDT------SLTPLNIQGGNAFRASVWVNGWFLGSYWPGIG-PQTTFSVPAGILKYGNNVLV 102 (111)
T ss_dssp GTSSSCEEEEEEEEETTTEEE------EEE-EEECSSTTEEEEEEETTEEEEEEETTTE-CCEEEEE-BTTBTTCEEEEE
T ss_pred cccCCCCEEEEEEEeCCCcce------eEEEEeccCCCceEEEEEECCEEeeeecCCCC-ccEEEEeCceeecCCCEEEE
Confidence 346789999999996543221 123 4444 68999999999999999873222 2244555442 555677889
Q ss_pred EEEeecCc
Q 036343 509 LLSATVGL 516 (795)
Q Consensus 509 ILVEn~GR 516 (795)
+|+.+||.
T Consensus 103 vl~~~~g~ 110 (111)
T PF13364_consen 103 VLWDNMGH 110 (111)
T ss_dssp EEEE-STT
T ss_pred EEEeCCCC
Confidence 99999995
No 16
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This domain has a jelly-roll fold [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3FN9_C 2VZU_A 2X09_A 2VZO_A 2X05_A 2VZV_B ....
Probab=98.01 E-value=1.7e-05 Score=78.39 Aligned_cols=98 Identities=27% Similarity=0.279 Sum_probs=69.5
Q ss_pred CCCccEEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCc-cEEEEEE
Q 036343 433 NDVSDYLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGK-NQISLLS 511 (795)
Q Consensus 433 ~~~~GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~-n~L~ILV 511 (795)
....|+.|||++|.++... .+....|.+.++.+.+.|||||+++|...+... .+.++++-.++.|. |+|.|.|
T Consensus 64 ~~~~~~~wYr~~f~lp~~~----~~~~~~L~f~gv~~~a~v~vNG~~vg~~~~~~~--~~~~dIt~~l~~g~~N~l~V~v 137 (167)
T PF02837_consen 64 WDYSGYAWYRRTFTLPADW----KGKRVFLRFEGVDYAAEVYVNGKLVGSHEGGYT--PFEFDITDYLKPGEENTLAVRV 137 (167)
T ss_dssp STCCSEEEEEEEEEESGGG----TTSEEEEEESEEESEEEEEETTEEEEEEESTTS---EEEECGGGSSSEEEEEEEEEE
T ss_pred cccCceEEEEEEEEeCchh----cCceEEEEeccceEeeEEEeCCeEEeeeCCCcC--CeEEeChhhccCCCCEEEEEEE
Confidence 3578999999999886532 234578999999999999999999999875332 35555555577887 9999999
Q ss_pred eecCcccccCCC-cccCCCCCCCeEE
Q 036343 512 ATVGLQNYGSKF-DMVPNGIPGPVLL 536 (795)
Q Consensus 512 En~GRvNyG~~l-~~~~KGI~g~V~l 536 (795)
.+...-.+-+.+ .....||.++|.|
T Consensus 138 ~~~~~~~~~~~~~~~~~~GI~r~V~L 163 (167)
T PF02837_consen 138 DNWPDGSTIPGFDYFNYAGIWRPVWL 163 (167)
T ss_dssp ESSSGGGCGBSSSEEE--EEESEEEE
T ss_pred eecCCCceeecCcCCccCccccEEEE
Confidence 965543331111 1346899999988
No 17
>smart00633 Glyco_10 Glycosyl hydrolase family 10.
Probab=97.99 E-value=2.1e-05 Score=83.80 Aligned_cols=115 Identities=23% Similarity=0.402 Sum_probs=85.0
Q ss_pred ccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHH
Q 036343 81 WNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTL 160 (795)
Q Consensus 81 Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~ 160 (795)
|...||++|+|||+ .++++++.|+++||.| |..+-+ |.. ..|.|+...+ .+..++++.+|+++
T Consensus 3 W~~~ep~~G~~n~~---~~D~~~~~a~~~gi~v--~gH~l~---W~~-~~P~W~~~~~--------~~~~~~~~~~~i~~ 65 (254)
T smart00633 3 WDSTEPSRGQFNFS---GADAIVNFAKENGIKV--RGHTLV---WHS-QTPDWVFNLS--------KETLLARLENHIKT 65 (254)
T ss_pred cccccCCCCccChH---HHHHHHHHHHHCCCEE--EEEEEe---ecc-cCCHhhhcCC--------HHHHHHHHHHHHHH
Confidence 89999999999999 8999999999999998 333222 544 6899986422 24567888999999
Q ss_pred HHHHHHhccccccCCCcEEEeecccccccccc------cC-CcccHHHHHHHHHHhhcCCCccceeee
Q 036343 161 IVDMAKKEKLFASQGGPIILAQIENEYGNVMS------DY-GDAGKSYINWCAKMATSLDIGVPWIMC 221 (795)
Q Consensus 161 l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~------~~-~~~~~~y~~~l~~~~~~~g~~vp~~~~ 221 (795)
++.+++ |.|..|+|=||--.... .+ ...+.+|+...-+.+++...++.++.+
T Consensus 66 v~~ry~---------g~i~~wdV~NE~~~~~~~~~~~~~w~~~~G~~~i~~af~~ar~~~P~a~l~~N 124 (254)
T smart00633 66 VVGRYK---------GKIYAWDVVNEALHDNGSGLRRSVWYQILGEDYIEKAFRYAREADPDAKLFYN 124 (254)
T ss_pred HHHHhC---------CcceEEEEeeecccCCCcccccchHHHhcChHHHHHHHHHHHHhCCCCEEEEe
Confidence 988876 46899999999543210 11 112357888888888887777777665
No 18
>TIGR03356 BGL beta-galactosidase.
Probab=97.76 E-value=7.1e-05 Score=85.72 Aligned_cols=97 Identities=14% Similarity=0.164 Sum_probs=80.1
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++|++||++|+|++++-|.|...+|. +|++|.+|....+++|+.+.++||.+|+--=. -.+|.||.+
T Consensus 54 ~~y~eDi~l~~~~G~~~~R~si~Wsri~p~g~~~~n~~~~~~y~~~i~~l~~~gi~pivtL~H--------fd~P~~l~~ 125 (427)
T TIGR03356 54 HRYEEDVALMKELGVDAYRFSIAWPRIFPEGTGPVNPKGLDFYDRLVDELLEAGIEPFVTLYH--------WDLPQALED 125 (427)
T ss_pred HhHHHHHHHHHHcCCCeEEcccchhhcccCCCCCcCHHHHHHHHHHHHHHHHcCCeeEEeecc--------CCccHHHHh
Confidence 468899999999999999999999999999 79999999999999999999999998765321 248999976
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHh
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKK 167 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~ 167 (795)
..+-. ++...++..+|.+.+++++++
T Consensus 126 ~gGw~-----~~~~~~~f~~ya~~~~~~~~d 151 (427)
T TIGR03356 126 RGGWL-----NRDTAEWFAEYAAVVAERLGD 151 (427)
T ss_pred cCCCC-----ChHHHHHHHHHHHHHHHHhCC
Confidence 54432 466777777777888777773
No 19
>PLN02801 beta-amylase
Probab=97.75 E-value=0.00011 Score=83.71 Aligned_cols=80 Identities=28% Similarity=0.541 Sum_probs=62.9
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC----
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG---- 128 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G---- 128 (795)
.++.-+..|+++|++|+..|.+.|-|.+.|. .|++|||+| ..++.++++++||++ ||.+ --|+- +-|
T Consensus 35 ~~~~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~l~~mvr~~GLKlq~vmSF--HqCGG-NVGD~~~ 108 (517)
T PLN02801 35 DEEGLEKQLKRLKEAGVDGVMVDVWWGIVESKGPKQYDWSA---YRSLFELVQSFGLKIQAIMSF--HQCGG-NVGDAVN 108 (517)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEEe--cccCC-CCCCccc
Confidence 3445678999999999999999999999998 599999996 677799999999995 5665 22333 111
Q ss_pred -Cccccccc----CCCcc
Q 036343 129 -GFPVWLHN----MPGIE 141 (795)
Q Consensus 129 -G~P~WL~~----~p~~~ 141 (795)
-||.|+.. +|++.
T Consensus 109 IpLP~WV~~~g~~~pDi~ 126 (517)
T PLN02801 109 IPIPQWVRDVGDSDPDIF 126 (517)
T ss_pred ccCCHHHHHhhccCCCce
Confidence 28999974 67764
No 20
>PLN02705 beta-amylase
Probab=97.75 E-value=0.00011 Score=84.71 Aligned_cols=78 Identities=15% Similarity=0.280 Sum_probs=62.2
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC-----C
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG-----G 129 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G-----G 129 (795)
+.-+..|+++|++|+..|.+-|-|.+.|. .|++|||+| ..+++++++++||++ ||.+ --|+- +-| -
T Consensus 268 ~al~a~L~aLK~aGVdGVmvDVWWGiVE~~~P~~YdWsg---Y~~L~~mvr~~GLKlqvVmSF--HqCGG-NVGD~~~IP 341 (681)
T PLN02705 268 EGVRQELSHMKSLNVDGVVVDCWWGIVEGWNPQKYVWSG---YRELFNIIREFKLKLQVVMAF--HEYGG-NASGNVMIS 341 (681)
T ss_pred HHHHHHHHHHHHcCCCEEEEeeeeeEeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEe--eccCC-CCCCccccc
Confidence 44578899999999999999999999998 699999996 677799999999995 5665 23443 112 2
Q ss_pred ccccccc----CCCcc
Q 036343 130 FPVWLHN----MPGIE 141 (795)
Q Consensus 130 ~P~WL~~----~p~~~ 141 (795)
||.|+.. +|+|.
T Consensus 342 LP~WV~e~g~~nPDif 357 (681)
T PLN02705 342 LPQWVLEIGKDNQDIF 357 (681)
T ss_pred CCHHHHHhcccCCCce
Confidence 8999974 57765
No 21
>PLN02161 beta-amylase
Probab=97.73 E-value=0.00014 Score=82.81 Aligned_cols=76 Identities=20% Similarity=0.387 Sum_probs=60.6
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC-----Ccc
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG-----GFP 131 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G-----G~P 131 (795)
-+..|+++|++|+..|.+-|-|.+.|. .|++|||+| ..++.++++++||++ ||.+ --|+- +-| -||
T Consensus 119 l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsg---Y~~l~~mvr~~GLKlq~vmSF--HqCGG-NvGd~~~IpLP 192 (531)
T PLN02161 119 LTVSLKALKLAGVHGIAVEVWWGIVERFSPLEFKWSL---YEELFRLISEAGLKLHVALCF--HSNMH-LFGGKGGISLP 192 (531)
T ss_pred HHHHHHHHHHcCCCEEEEEeeeeeeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEe--cccCC-CCCCccCccCC
Confidence 457899999999999999999999998 799999995 677799999999995 5554 22322 112 289
Q ss_pred ccccc----CCCcc
Q 036343 132 VWLHN----MPGIE 141 (795)
Q Consensus 132 ~WL~~----~p~~~ 141 (795)
.|+.. +|++.
T Consensus 193 ~WV~~~g~~~pDi~ 206 (531)
T PLN02161 193 LWIREIGDVNKDIY 206 (531)
T ss_pred HHHHhhhccCCCce
Confidence 99974 67765
No 22
>PLN00197 beta-amylase; Provisional
Probab=97.73 E-value=0.00014 Score=83.47 Aligned_cols=79 Identities=22% Similarity=0.480 Sum_probs=62.9
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC-----
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG----- 128 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G----- 128 (795)
++.-+..|+++|++|+..|.+-|-|.+.|. .|++|||+| ..+++++++++||++ ||.+ --|+- +-|
T Consensus 126 ~~~l~~~L~~LK~~GVdGVmvDvWWGiVE~~~p~~YdWsg---Y~~L~~mvr~~GLKlq~VmSF--HqCGG-NVGD~~~I 199 (573)
T PLN00197 126 RKAMKASLQALKSAGVEGIMMDVWWGLVERESPGVYNWGG---YNELLEMAKRHGLKVQAVMSF--HQCGG-NVGDSCTI 199 (573)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeeeeeccCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEe--cccCC-CCCCcccc
Confidence 345678999999999999999999999998 799999996 667799999999995 5665 22333 112
Q ss_pred Cccccccc----CCCcc
Q 036343 129 GFPVWLHN----MPGIE 141 (795)
Q Consensus 129 G~P~WL~~----~p~~~ 141 (795)
-||.|+.. +|++.
T Consensus 200 pLP~WV~~~g~~dpDif 216 (573)
T PLN00197 200 PLPKWVVEEVDKDPDLA 216 (573)
T ss_pred cCCHHHHHhhccCCCce
Confidence 28999974 67765
No 23
>PF03198 Glyco_hydro_72: Glucanosyltransferase; InterPro: IPR004886 This family is a group of yeast glycolipid proteins anchored to the membrane. It includes Candida albicans (Yeast) pH-regulated protein, which is required for apical growth and plays a role in morphogenesis and Saccharomyces cerevisiae glycolipid anchored surface protein.; PDB: 2W61_A 2W62_A 2W63_A.
Probab=97.73 E-value=0.00037 Score=75.68 Aligned_cols=152 Identities=18% Similarity=0.189 Sum_probs=84.5
Q ss_pred eeEEeeCceEE--ECCeEEEEEEEEeeCCCC-----------CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeec
Q 036343 27 YRVSHDGRAIT--IDGERKILLSGSIHYPRS-----------TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDF 93 (795)
Q Consensus 27 ~~v~~~~~~~~--idG~p~~~~sG~~hy~r~-----------~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df 93 (795)
..|++.++.|. .+|++|+|.+-.+-+--. .++.|+.++..||++|+|||++|-.
T Consensus 9 ~pI~ikG~kff~~~~g~~F~ikGVaYQp~~~~~~~~~~DPLad~~~C~rDi~~l~~LgiNtIRVY~v------------- 75 (314)
T PF03198_consen 9 PPIEIKGNKFFYSKNGTRFFIKGVAYQPGGSSEPSNYIDPLADPEACKRDIPLLKELGINTIRVYSV------------- 75 (314)
T ss_dssp --EEEETTEEEETTT--B--EEEEE----------SS--GGG-HHHHHHHHHHHHHHT-SEEEES---------------
T ss_pred CCEEEECCEeEECCCCCEEEEeeEEcccCCCCCCccCcCcccCHHHHHHhHHHHHHcCCCEEEEEEe-------------
Confidence 46899999999 789999988766554222 3567999999999999999999832
Q ss_pred cCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCCh--hHH-HHHHHHHHHHHHHHHhccc
Q 036343 94 TGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNK--VFM-NEMQNFTTLIVDMAKKEKL 170 (795)
Q Consensus 94 ~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~--~y~-~~~~~~~~~l~~~~~~~~~ 170 (795)
+-..|-++++++.+++||||||.-+ .| ... +-.++| .|- ...++++. +++.++.++
T Consensus 76 dp~~nHd~CM~~~~~aGIYvi~Dl~-----------~p-------~~s-I~r~~P~~sw~~~l~~~~~~-vid~fa~Y~- 134 (314)
T PF03198_consen 76 DPSKNHDECMSAFADAGIYVILDLN-----------TP-------NGS-INRSDPAPSWNTDLLDRYFA-VIDAFAKYD- 134 (314)
T ss_dssp -TTS--HHHHHHHHHTT-EEEEES------------BT-------TBS---TTS------HHHHHHHHH-HHHHHTT-T-
T ss_pred CCCCCHHHHHHHHHhCCCEEEEecC-----------CC-------Ccc-ccCCCCcCCCCHHHHHHHHH-HHHHhccCC-
Confidence 2334889999999999999999964 22 222 334445 553 34445444 446677554
Q ss_pred cccCCCcEEEeecccccccccccC--CcccHHHHHHHHHHhhcCCC-ccce
Q 036343 171 FASQGGPIILAQIENEYGNVMSDY--GDAGKSYINWCAKMATSLDI-GVPW 218 (795)
Q Consensus 171 ~~~~gGpII~~QiENEyg~~~~~~--~~~~~~y~~~l~~~~~~~g~-~vp~ 218 (795)
+++++=+-||--.....- .+.-|+..+-+|+-+++.+. .+|+
T Consensus 135 ------N~LgFf~GNEVin~~~~t~aap~vKAavRD~K~Yi~~~~~R~IPV 179 (314)
T PF03198_consen 135 ------NTLGFFAGNEVINDASNTNAAPYVKAAVRDMKAYIKSKGYRSIPV 179 (314)
T ss_dssp ------TEEEEEEEESSS-STT-GGGHHHHHHHHHHHHHHHHHSSS----E
T ss_pred ------ceEEEEecceeecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCce
Confidence 799999999986431100 01234555555555566555 4554
No 24
>PLN02905 beta-amylase
Probab=97.72 E-value=0.00014 Score=84.16 Aligned_cols=76 Identities=20% Similarity=0.495 Sum_probs=61.0
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC-----Ccc
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG-----GFP 131 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G-----G~P 131 (795)
-+..|+++|++|+..|.+-|-|.+.|. .|++|||+| ..+++++++++||++ ||.+ --|+- +-| -||
T Consensus 288 l~a~L~aLK~aGVdGVmvDVWWGiVE~~gP~~YdWsg---Y~~L~~mvr~~GLKlqvVMSF--HqCGG-NVGD~~~IPLP 361 (702)
T PLN02905 288 LLKQLRILKSINVDGVKVDCWWGIVEAHAPQEYNWNG---YKRLFQMVRELKLKLQVVMSF--HECGG-NVGDDVCIPLP 361 (702)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeeeeecCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEe--cccCC-CCCCcccccCC
Confidence 467899999999999999999999998 799999996 677799999999995 5665 23433 112 289
Q ss_pred ccccc----CCCcc
Q 036343 132 VWLHN----MPGIE 141 (795)
Q Consensus 132 ~WL~~----~p~~~ 141 (795)
.|+.. +|+|.
T Consensus 362 ~WV~e~g~~nPDif 375 (702)
T PLN02905 362 HWVAEIGRSNPDIF 375 (702)
T ss_pred HHHHHhhhcCCCce
Confidence 99974 67765
No 25
>PLN02803 beta-amylase
Probab=97.66 E-value=0.0002 Score=82.02 Aligned_cols=77 Identities=18% Similarity=0.500 Sum_probs=61.1
Q ss_pred ChHHHHHHHHHcCCCEEEecccccccCC-cCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCC-----Cc
Q 036343 59 MWPDLIKKAKEGGLDAIETYVFWNAHEP-LRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYG-----GF 130 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~yv~Wn~hEp-~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~G-----G~ 130 (795)
.-+..|+++|++|+..|.+-|-|.+.|. .|++|||+| ..+++++++++||++ ||.+ --|+- +-| -|
T Consensus 108 ~l~~~L~~LK~~GVdGVmvDVWWGiVE~~~p~~YdWsg---Y~~l~~mvr~~GLKlq~vmSF--HqCGG-NVGD~~~IpL 181 (548)
T PLN02803 108 AMNASLMALRSAGVEGVMVDAWWGLVEKDGPMKYNWEG---YAELVQMVQKHGLKLQVVMSF--HQCGG-NVGDSCSIPL 181 (548)
T ss_pred HHHHHHHHHHHcCCCEEEEEeeeeeeccCCCCcCCcHH---HHHHHHHHHHcCCeEEEEEEe--cccCC-CCCCcccccC
Confidence 3467899999999999999999999998 599999996 677799999999995 5654 22333 112 28
Q ss_pred cccccc----CCCcc
Q 036343 131 PVWLHN----MPGIE 141 (795)
Q Consensus 131 P~WL~~----~p~~~ 141 (795)
|.|+.. +|+|.
T Consensus 182 P~WV~e~~~~~pDi~ 196 (548)
T PLN02803 182 PPWVLEEMSKNPDLV 196 (548)
T ss_pred CHHHHHhhhcCCCce
Confidence 999974 67765
No 26
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=97.62 E-value=0.00054 Score=74.57 Aligned_cols=213 Identities=23% Similarity=0.296 Sum_probs=110.2
Q ss_pred ceEE-ECCeEEEEEEEEeeC---CCCCCCChHHHHHHHHHcCCCEEEeccc--cccc--------CC----cCceeeccC
Q 036343 34 RAIT-IDGERKILLSGSIHY---PRSTPGMWPDLIKKAKEGGLDAIETYVF--WNAH--------EP----LRRQYDFTG 95 (795)
Q Consensus 34 ~~~~-idG~p~~~~sG~~hy---~r~~~~~W~~~l~k~ka~G~N~V~~yv~--Wn~h--------Ep----~~G~~df~g 95 (795)
+.|. -||+||+.++ .-.+ .|...++|+.-|+..|+-|||+|++=|+ |..+ .| .++++||+.
T Consensus 3 r~f~~~dG~Pff~lg-dT~W~~~~~~~~~e~~~yL~~r~~qgFN~iq~~~l~~~~~~~~~n~~~~~~~~~~~~~~~d~~~ 81 (289)
T PF13204_consen 3 RHFVYADGTPFFWLG-DTAWSLFHRLTREEWEQYLDTRKEQGFNVIQMNVLPQWDGYNTPNRYGFAPFPDEDPGQFDFTR 81 (289)
T ss_dssp SSEEETTS-B--EEE-EE-TTHHHH--HHHHHHHHHHHHHTT--EEEEES-SSSS-B----TTS-BS-SSTT------TT
T ss_pred ceEecCCCCEEeehh-HHHHHHhhCCCHHHHHHHHHHHHHCCCCEEEEEeCCCcccccccccCCCcCCCCCCccccCCCC
Confidence 4555 7999999998 5554 3567899999999999999999999876 4432 12 123367654
Q ss_pred c-----hHHHHHHHHHHHcCcEEEEec---CceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHh
Q 036343 96 N-----LDLIRFIKTIQDQGLYVILRI---GPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKK 167 (795)
Q Consensus 96 ~-----~dl~~fl~~a~~~gL~vilrp---GPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~ 167 (795)
. ..+++.|+.|.+.||.+-|-| +||.-+-|-+| +.+. =.+.+++|.+-|+++++.
T Consensus 82 ~N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~~~~~~~Wg~~---------~~~m--------~~e~~~~Y~~yv~~Ry~~ 144 (289)
T PF13204_consen 82 PNPAYFDHLDRRIEKANELGIEAALVPFWGCPYVPGTWGFG---------PNIM--------PPENAERYGRYVVARYGA 144 (289)
T ss_dssp ----HHHHHHHHHHHHHHTT-EEEEESS-HHHHH----------------TTSS---------HHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHCCCeEEEEEEECCcccccccccc---------ccCC--------CHHHHHHHHHHHHHHHhc
Confidence 3 689999999999999975543 33433334332 1211 146788999999999996
Q ss_pred ccccccCCCcEEEeecccccccccccCCcccHHHHHHHHHHhhcCCCccce-eeeCCC--------CCC-----------
Q 036343 168 EKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATSLDIGVPW-IMCQES--------DAP----------- 227 (795)
Q Consensus 168 ~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~-~~~~~~--------~~~----------- 227 (795)
+| +|| +=|=||+ . ......++.+.+.+.+++..-.-+. ++..+. +.+
T Consensus 145 ~~-------Nvi-W~l~gd~-~----~~~~~~~~w~~~~~~i~~~dp~~L~T~H~~~~~~~~~~~~~~~Wldf~~~Qsgh 211 (289)
T PF13204_consen 145 YP-------NVI-WILGGDY-F----DTEKTRADWDAMARGIKENDPYQLITIHPCGRTSSPDWFHDEPWLDFNMYQSGH 211 (289)
T ss_dssp -S-------SEE-EEEESSS-------TTSSHHHHHHHHHHHHHH--SS-EEEEE-BTEBTHHHHTT-TT--SEEEB--S
T ss_pred CC-------CCE-EEecCcc-C----CCCcCHHHHHHHHHHHHhhCCCCcEEEeCCCCCCcchhhcCCCcceEEEeecCC
Confidence 64 465 5588999 2 1235677888888888775432221 111110 000
Q ss_pred ---CC-C-------CC-CCCCCCCceecc-cccccccccCCCCCCCCHHHHHHHHHHHHHcCC
Q 036343 228 ---SP-M-------FT-PNNPNSPKIWTE-NWTGWFKSWGGKDPKRTAEDLAFAVARFFQFGG 277 (795)
Q Consensus 228 ---~~-~-------f~-~~~~~~P~~~~E-~~~Gwf~~WG~~~~~~~~~~~~~~~~~~l~~g~ 277 (795)
.. . +. ...|.+|.+..| -|.|--..+.......+++++...+=+-+-+|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~p~KPvin~Ep~YEg~~~~~~~~~~~~~~~dvrr~aw~svlaGa 274 (289)
T PF13204_consen 212 NRYDQDNWYYLPEEFDYRRKPVKPVINGEPCYEGIPYSRWGYNGRFSAEDVRRRAWWSVLAGA 274 (289)
T ss_dssp --TT--THHHH--HHHHTSSS---EEESS---BT-BTTSS-TS-B--HHHHHHHHHHHHHCT-
T ss_pred CcccchHHHHHhhhhhhhhCCCCCEEcCcccccCCCCCcCcccCCCCHHHHHHHHHHHHhcCC
Confidence 00 0 11 346889999999 344544333333345677887765544444555
No 27
>PF01373 Glyco_hydro_14: Glycosyl hydrolase family 14; InterPro: IPR001554 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 14 GH14 from CAZY comprises enzymes with only one known activity; beta-amylase (3.2.1.2 from EC). A Glu residue has been proposed as a catalytic residue, but it is not known if it is the nucleophile or the proton donor. Beta-amylase [, ] is an enzyme that hydrolyses 1,4-alpha-glucosidic linkages in starch-type polysaccharide substrates so as to remove successive maltose units from the non-reducing ends of the chains. Beta-amylase is present in certain bacteria as well as in plants. Three highly conserved sequence regions are found in all known beta-amylases. The first of these regions is located in the N-terminal section of the enzymes and contains an aspartate which is known [] to be involved in the catalytic mechanism. The second, located in a more central location, is centred around a glutamate which is also involved [] in the catalytic mechanism. The 3D structure of a complex of soybean beta-amylase with an inhibitor (alpha-cyclodextrin) has been determined to 3.0A resolution by X-ray diffraction []. The enzyme folds into large and small domains: the large domain has a (beta alpha)8 super-secondary structural core, while the smaller is formed from two long loops extending from the beta-3 and beta-4 strands of the (beta alpha)8 fold []. The interface of the two domains, together with shorter loops from the (beta alpha)8 core, form a deep cleft, in which the inhibitor binds []. Two maltose molecules also bind in the cleft, one sharing a binding site with alpha-cyclodextrin, and the other sitting more deeply in the cleft [].; GO: 0016161 beta-amylase activity, 0000272 polysaccharide catabolic process; PDB: 1FA2_A 2DQX_A 1WDP_A 1UKP_C 1BYC_A 1BYA_A 1Q6C_A 1V3I_A 1BTC_A 1BYB_A ....
Probab=97.54 E-value=0.00011 Score=82.34 Aligned_cols=110 Identities=20% Similarity=0.377 Sum_probs=73.4
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeee----eCCCCccc
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAE----WNYGGFPV 132 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaE----w~~GG~P~ 132 (795)
-+..|+++|++|+..|.+.|-|.+.|.+ |++|||+| .+++.+++++.||++ ||.+ --|+- .-+=-||.
T Consensus 18 ~~~~L~~LK~~GV~GVmvdvWWGiVE~~~p~~ydWs~---Y~~l~~~vr~~GLk~~~vmsf--H~cGgNvgD~~~IpLP~ 92 (402)
T PF01373_consen 18 LEAQLRALKSAGVDGVMVDVWWGIVEGEGPQQYDWSG---YRELFEMVRDAGLKLQVVMSF--HQCGGNVGDDCNIPLPS 92 (402)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEHHHHTGSSTTB---HH---HHHHHHHHHHTT-EEEEEEE---S-BSSSTTSSSEB-S-H
T ss_pred HHHHHHHHHHcCCcEEEEEeEeeeeccCCCCccCcHH---HHHHHHHHHHcCCeEEEEEee--ecCCCCCCCccCCcCCH
Confidence 4678999999999999999999999997 99999995 778899999999996 4543 22321 11113899
Q ss_pred cccc---CCCcccccCC---------------ChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeec
Q 036343 133 WLHN---MPGIEELRTT---------------NKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQI 183 (795)
Q Consensus 133 WL~~---~p~~~~~R~~---------------d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Qi 183 (795)
|+.. ..+|. .++ ... ++.-+.|++.....++ ++. +.|..|||
T Consensus 93 Wv~~~~~~~di~--ytd~~G~rn~E~lSp~~~grt-~~~Y~dfm~sF~~~f~--~~~----~~I~~I~v 152 (402)
T PF01373_consen 93 WVWEIGKKDDIF--YTDRSGNRNKEYLSPVLDGRT-LQCYSDFMRSFRDNFS--DYL----STITEIQV 152 (402)
T ss_dssp HHHHHHHHSGGE--EE-TTS-EEEEEE-CTBTTBC-HHHHHHHHHHHHHHCH--HHH----TGEEEEEE
T ss_pred HHHhccccCCcE--EECCCCCcCcceeecccCCch-HHHHHHHHHHHHHHHH--HHH----hhheEEEe
Confidence 9973 22553 211 122 5666677777777777 432 68888887
No 28
>PF00331 Glyco_hydro_10: Glycosyl hydrolase family 10; InterPro: IPR001000 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 10 GH10 from CAZY comprises enzymes with a number of known activities; xylanase (3.2.1.8 from EC); endo-1,3-beta-xylanase (3.2.1.32 from EC); cellobiohydrolase (3.2.1.91 from EC). These enzymes were formerly known as cellulase family F. The microbial degradation of cellulose and xylans requires several types of enzymes such as endoglucanases (3.2.1.4 from EC), cellobiohydrolases (3.2.1.91 from EC) (exoglucanases), or xylanases (3.2.1.8 from EC) [, ]. Fungi and bacteria produces a spectrum of cellulolytic enzymes (cellulases) and xylanases which, on the basis of sequence similarities, can be classified into families. One of these families is known as the cellulase family F [] or as the glycosyl hydrolases family 10 []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1UQZ_A 1UQY_A 1UR2_A 1UR1_A 2CNC_A 1OD8_A 1E0W_A 1E0V_A 1V0M_A 1E0X_B ....
Probab=97.06 E-value=0.00063 Score=75.11 Aligned_cols=157 Identities=15% Similarity=0.221 Sum_probs=106.3
Q ss_pred EEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEec--ccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceee
Q 036343 45 LLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETY--VFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 45 ~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~y--v~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyic 122 (795)
.++.+++..++..+. ..+.+-..-||.|..- .-|...||++|+|||+ ..+++++.|+++||.|--.+ -
T Consensus 11 ~~G~av~~~~~~~~~---~~~~~~~~~Fn~~t~eN~~Kw~~~e~~~g~~~~~---~~D~~~~~a~~~g~~vrGH~--L-- 80 (320)
T PF00331_consen 11 PFGAAVNAQQLEDDP---RYRELFAKHFNSVTPENEMKWGSIEPEPGRFNFE---SADAILDWARENGIKVRGHT--L-- 80 (320)
T ss_dssp EEEEEEBGGGHTHHH---HHHHHHHHH-SEEEESSTTSHHHHESBTTBEE-H---HHHHHHHHHHHTT-EEEEEE--E--
T ss_pred CEEEEechhHcCCcH---HHHHHHHHhCCeeeeccccchhhhcCCCCccCcc---chhHHHHHHHhcCcceeeee--E--
Confidence 678888877654331 4555556679988875 6699999999999999 89999999999999975332 1
Q ss_pred eeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccc---------c
Q 036343 123 AEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMS---------D 193 (795)
Q Consensus 123 aEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~---------~ 193 (795)
=|.. ..|.|+...+... ....+...+.+++++++++.+++.. |.|.+|-|=||-=.... .
T Consensus 81 -vW~~-~~P~w~~~~~~~~--~~~~~~~~~~l~~~I~~v~~~y~~~-------g~i~~WDVvNE~i~~~~~~~~~r~~~~ 149 (320)
T PF00331_consen 81 -VWHS-QTPDWVFNLANGS--PDEKEELRARLENHIKTVVTRYKDK-------GRIYAWDVVNEAIDDDGNPGGLRDSPW 149 (320)
T ss_dssp -EESS-SS-HHHHTSTTSS--BHHHHHHHHHHHHHHHHHHHHTTTT-------TTESEEEEEES-B-TTSSSSSBCTSHH
T ss_pred -EEcc-cccceeeeccCCC--cccHHHHHHHHHHHHHHHHhHhccc-------cceEEEEEeeecccCCCccccccCChh
Confidence 1434 7899998641110 0001347889999999999888721 78999999999643211 1
Q ss_pred CCcccHHHHHHHHHHhhcCCCccceeeeC
Q 036343 194 YGDAGKSYINWCAKMATSLDIGVPWIMCQ 222 (795)
Q Consensus 194 ~~~~~~~y~~~l~~~~~~~g~~vp~~~~~ 222 (795)
|...+.+|+...-+.+++...++.||.++
T Consensus 150 ~~~lG~~yi~~aF~~A~~~~P~a~L~~ND 178 (320)
T PF00331_consen 150 YDALGPDYIADAFRAAREADPNAKLFYND 178 (320)
T ss_dssp HHHHTTCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred hhcccHhHHHHHHHHHHHhCCCcEEEecc
Confidence 11224568888888888877777777665
No 29
>COG3693 XynA Beta-1,4-xylanase [Carbohydrate transport and metabolism]
Probab=96.98 E-value=0.0047 Score=67.20 Aligned_cols=132 Identities=19% Similarity=0.310 Sum_probs=98.4
Q ss_pred HHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCC
Q 036343 67 AKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTT 146 (795)
Q Consensus 67 ~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~ 146 (795)
.|+.+.=|-+.-.=|+..||++|.|+|+ --|++.+.|+++||.+ |-=+.| |-+ -.|.|+..+. -+
T Consensus 55 ~re~n~iTpenemKwe~i~p~~G~f~Fe---~AD~ia~FAr~h~m~l--hGHtLv---W~~-q~P~W~~~~e------~~ 119 (345)
T COG3693 55 ARECNQITPENEMKWEAIEPERGRFNFE---AADAIANFARKHNMPL--HGHTLV---WHS-QVPDWLFGDE------LS 119 (345)
T ss_pred HhhhcccccccccccccccCCCCccCcc---chHHHHHHHHHcCCee--ccceee---ecc-cCCchhhccc------cC
Confidence 5555555555667799999999999999 6889999999999954 333333 444 6899997533 23
Q ss_pred ChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccccccc----cccc---CCcccHHHHHHHHHHhhcCCCcccee
Q 036343 147 NKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGN----VMSD---YGDAGKSYINWCAKMATSLDIGVPWI 219 (795)
Q Consensus 147 d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~----~~~~---~~~~~~~y~~~l~~~~~~~g~~vp~~ 219 (795)
-++.++.+++++..++.+++ |-|+.|-|=||-=. +.++ .+-.+.+|+++.-+.+++.+-+.-++
T Consensus 120 ~~~~~~~~e~hI~tV~~rYk---------g~~~sWDVVNE~vdd~g~~R~s~w~~~~~gpd~I~~aF~~AreadP~AkL~ 190 (345)
T COG3693 120 KEALAKMVEEHIKTVVGRYK---------GSVASWDVVNEAVDDQGSLRRSAWYDGGTGPDYIKLAFHIAREADPDAKLV 190 (345)
T ss_pred hHHHHHHHHHHHHHHHHhcc---------CceeEEEecccccCCCchhhhhhhhccCCccHHHHHHHHHHHhhCCCceEE
Confidence 47789999999999999998 35999999999643 2111 11356789999999999977666666
Q ss_pred eeC
Q 036343 220 MCQ 222 (795)
Q Consensus 220 ~~~ 222 (795)
-++
T Consensus 191 ~ND 193 (345)
T COG3693 191 IND 193 (345)
T ss_pred eec
Confidence 654
No 30
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 1 GH1 from CAZY comprises enzymes with a number of known activities; beta-glucosidase (3.2.1.21 from EC); beta-galactosidase (3.2.1.23 from EC); 6-phospho-beta-galactosidase (3.2.1.85 from EC); 6-phospho-beta-glucosidase (3.2.1.86 from EC); lactase-phlorizin hydrolase (3.2.1.62 from EC), (3.2.1.108 from EC); beta-mannosidase (3.2.1.25 from EC); myrosinase (3.2.1.147 from EC). ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1QVB_A 3AHY_D 2E9L_A 2ZOX_A 2JFE_X 2E9M_A 3FIZ_A 3FIY_A 3CMJ_A 3FJ0_A ....
Probab=96.93 E-value=0.0014 Score=75.87 Aligned_cols=96 Identities=17% Similarity=0.257 Sum_probs=72.5
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..|+++|+.||++|+|+.+.-|.|.-.+|. +|++|-+|....+++|+.+.++||..|+-- ---.+|.||.
T Consensus 58 ~~y~eDi~l~~~lg~~~yRfsi~W~Ri~P~g~~g~~n~~~~~~Y~~~i~~l~~~gi~P~vtL--------~H~~~P~~l~ 129 (455)
T PF00232_consen 58 HRYKEDIALMKELGVNAYRFSISWSRIFPDGFEGKVNEEGLDFYRDLIDELLENGIEPIVTL--------YHFDLPLWLE 129 (455)
T ss_dssp HHHHHHHHHHHHHT-SEEEEE--HHHHSTTSSSSSS-HHHHHHHHHHHHHHHHTT-EEEEEE--------ESS--BHHHH
T ss_pred hhhhHHHHHHHhhccceeeeecchhheeecccccccCHhHhhhhHHHHHHHHhhccceeeee--------eeccccccee
Confidence 348999999999999999999999999999 699999999999999999999999966542 1235899998
Q ss_pred cCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
+.-+-. ++...+.-.+|.+.+++++.
T Consensus 130 ~~ggw~-----~~~~~~~F~~Ya~~~~~~~g 155 (455)
T PF00232_consen 130 DYGGWL-----NRETVDWFARYAEFVFERFG 155 (455)
T ss_dssp HHTGGG-----STHHHHHHHHHHHHHHHHHT
T ss_pred eccccc-----CHHHHHHHHHHHHHHHHHhC
Confidence 743332 46666777777777777777
No 31
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=96.84 E-value=0.0042 Score=68.82 Aligned_cols=104 Identities=24% Similarity=0.439 Sum_probs=68.6
Q ss_pred HHHHHHHHHcCCCEEEecccccccCCcC-ceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCC
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEPLR-RQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPG 139 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp~~-G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~ 139 (795)
+|.|+.||+.|+|.||+=| | +.|.. |..|.+ +..+..+.|+++||+|+|.+- |- -.|- +|+
T Consensus 27 ~d~~~ilk~~G~N~vRlRv-w--v~P~~~g~~~~~---~~~~~akrak~~Gm~vlldfH-YS---------D~Wa--DPg 88 (332)
T PF07745_consen 27 KDLFQILKDHGVNAVRLRV-W--VNPYDGGYNDLE---DVIALAKRAKAAGMKVLLDFH-YS---------DFWA--DPG 88 (332)
T ss_dssp --HHHHHHHTT--EEEEEE----SS-TTTTTTSHH---HHHHHHHHHHHTT-EEEEEE--SS---------SS----BTT
T ss_pred CCHHHHHHhcCCCeEEEEe-c--cCCcccccCCHH---HHHHHHHHHHHCCCeEEEeec-cc---------CCCC--CCC
Confidence 6899999999999999998 4 45555 777777 777788888899999999863 11 1232 333
Q ss_pred ccc----ccC-CChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccc
Q 036343 140 IEE----LRT-TNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYG 188 (795)
Q Consensus 140 ~~~----~R~-~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg 188 (795)
-+. -+. +-..-.++|..|.+.++..|++. |=.+=||||-||..
T Consensus 89 ~Q~~P~aW~~~~~~~l~~~v~~yT~~vl~~l~~~------G~~pd~VQVGNEin 136 (332)
T PF07745_consen 89 KQNKPAAWANLSFDQLAKAVYDYTKDVLQALKAA------GVTPDMVQVGNEIN 136 (332)
T ss_dssp B-B--TTCTSSSHHHHHHHHHHHHHHHHHHHHHT------T--ESEEEESSSGG
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCccEEEeCcccc
Confidence 220 122 33556789999999999999954 55678999999964
No 32
>COG2730 BglC Endoglucanase [Carbohydrate transport and metabolism]
Probab=96.65 E-value=0.0066 Score=69.27 Aligned_cols=114 Identities=15% Similarity=0.125 Sum_probs=73.2
Q ss_pred CCCCh-----HHHHHHHHHcCCCEEEecccccccCCc----CceeeccCchHHHHHHHHHHHcCcEEEEecC----ceee
Q 036343 56 TPGMW-----PDLIKKAKEGGLDAIETYVFWNAHEPL----RRQYDFTGNLDLIRFIKTIQDQGLYVILRIG----PYVC 122 (795)
Q Consensus 56 ~~~~W-----~~~l~k~ka~G~N~V~~yv~Wn~hEp~----~G~~df~g~~dl~~fl~~a~~~gL~vilrpG----Pyic 122 (795)
....| ++.+..||.+|||+||+++.|..+++. |...+-+-...|++.|+.|++.||+|+|-.- .-.|
T Consensus 66 ~~~~w~~~~~~~~~~~ik~~G~n~VRiPi~~~~~~~~~~~~p~~~~~~~~~~ld~~I~~a~~~gi~V~iD~H~~~~~~~~ 145 (407)
T COG2730 66 LESHWGNFITEEDFDQIKSAGFNAVRIPIGYWALQATDGDNPYLIGLTQLKILDEAINWAKKLGIYVLIDLHGYPGGNNG 145 (407)
T ss_pred chhccchhhhhhHHHHHHHcCCcEEEcccchhhhhccCCCCCCeecchHHHHHHHHHHHHHhcCeeEEEEecccCCCCCC
Confidence 45668 899999999999999999994444554 3333223223899999999999999999842 1111
Q ss_pred eeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccc
Q 036343 123 AEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYG 188 (795)
Q Consensus 123 aEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg 188 (795)
-| ..|... .. ....+.+++..+.++.|+.++++ .-.||++|+=||.-
T Consensus 146 ~~------~s~~~~--~~----~~~~~~~~~~~~~w~~ia~~f~~-------~~~VIg~~~~NEP~ 192 (407)
T COG2730 146 HE------HSGYTS--DY----KEENENVEATIDIWKFIANRFKN-------YDTVIGFELINEPN 192 (407)
T ss_pred cC------cccccc--cc----cccchhHHHHHHHHHHHHHhccC-------CCceeeeeeecCCc
Confidence 10 122211 00 01233445555555666666662 45899999999986
No 33
>PRK15014 6-phospho-beta-glucosidase BglA; Provisional
Probab=96.58 E-value=0.0066 Score=70.65 Aligned_cols=96 Identities=16% Similarity=0.188 Sum_probs=76.1
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..|+++++.||++|+|+-++-|.|.-.+|. +|++|-+|....+++|+.+.++||..++-- . -=.+|.||.
T Consensus 69 hry~EDI~Lm~elG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~l~~~GI~P~vTL-------~-H~dlP~~L~ 140 (477)
T PRK15014 69 GHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEAQPNEEGLKFYDDMFDELLKYNIEPVITL-------S-HFEMPLHLV 140 (477)
T ss_pred cccHHHHHHHHHcCCCEEEecccceeeccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEe-------e-CCCCCHHHH
Confidence 468999999999999999999999999997 677899999999999999999999976553 1 125899997
Q ss_pred cC-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NM-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.. -+-. ++...++-.+|.+.++++++
T Consensus 141 ~~yGGW~-----n~~~~~~F~~Ya~~~f~~fg 167 (477)
T PRK15014 141 QQYGSWT-----NRKVVDFFVRFAEVVFERYK 167 (477)
T ss_pred HhcCCCC-----ChHHHHHHHHHHHHHHHHhc
Confidence 53 3332 45566666666666766666
No 34
>PRK09852 cryptic 6-phospho-beta-glucosidase; Provisional
Probab=96.42 E-value=0.0032 Score=73.14 Aligned_cols=96 Identities=11% Similarity=0.133 Sum_probs=73.2
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..|+++++.||++|+|+.++-|.|.-.+|. ++++|=+|....+++|+.+.++||.+++--= -=.+|.||.
T Consensus 71 hry~eDi~l~~~lG~~~yR~si~WsRi~P~g~~~~~n~~~~~~Y~~~i~~l~~~gi~p~VtL~--------H~~~P~~l~ 142 (474)
T PRK09852 71 HRYKEDIALMAEMGFKVFRTSIAWSRLFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLC--------HFDVPMHLV 142 (474)
T ss_pred hhhHHHHHHHHHcCCCeEEeeceeeeeeeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEee--------CCCCCHHHH
Confidence 446999999999999999999999999997 5678888888999999999999999765431 225899997
Q ss_pred cC-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NM-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.. -+=. ++...++..+|.+.++++++
T Consensus 143 ~~~GGW~-----~~~~~~~F~~ya~~~~~~fg 169 (474)
T PRK09852 143 TEYGSWR-----NRKMVEFFSRYARTCFEAFD 169 (474)
T ss_pred HhcCCCC-----CHHHHHHHHHHHHHHHHHhc
Confidence 53 3332 44555555555555555555
No 35
>PRK10150 beta-D-glucuronidase; Provisional
Probab=96.38 E-value=0.018 Score=69.07 Aligned_cols=99 Identities=20% Similarity=0.209 Sum_probs=67.6
Q ss_pred CCccEEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCc-cEEEEEEe
Q 036343 434 DVSDYLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGK-NQISLLSA 512 (795)
Q Consensus 434 ~~~GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~-n~L~ILVE 512 (795)
...|..||+++|.++... .+....|.+.++...+.|||||++||...+... .+.++++-.|+.|. |+|.|.|.
T Consensus 62 ~~~G~~WYrr~f~lp~~~----~gk~v~L~Fegv~~~a~V~lNG~~vg~~~~~~~--~f~~DIT~~l~~G~~n~L~V~v~ 135 (604)
T PRK10150 62 NYVGDVWYQREVFIPKGW----AGQRIVLRFGSVTHYAKVWVNGQEVMEHKGGYT--PFEADITPYVYAGKSVRITVCVN 135 (604)
T ss_pred CCcccEEEEEEEECCccc----CCCEEEEEECcccceEEEEECCEEeeeEcCCcc--ceEEeCchhccCCCceEEEEEEe
Confidence 356899999999886432 234578999999999999999999999875332 34555544466675 49999998
Q ss_pred ecCcc---cccCCC-------------c-ccCCCCCCCeEEEe
Q 036343 513 TVGLQ---NYGSKF-------------D-MVPNGIPGPVLLVG 538 (795)
Q Consensus 513 n~GRv---NyG~~l-------------~-~~~KGI~g~V~l~~ 538 (795)
|.-+. ..|... . -...||..+|.|..
T Consensus 136 n~~~~~~~p~g~~~~~~~~~~k~~~~~d~~~~~GI~r~V~L~~ 178 (604)
T PRK10150 136 NELNWQTLPPGNVIEDGNGKKKQKYNFDFFNYAGIHRPVMLYT 178 (604)
T ss_pred cCCCcccCCCCccccCCccccccccccccccccCCCceEEEEE
Confidence 74221 011110 0 12579999999943
No 36
>PLN02998 beta-glucosidase
Probab=96.33 E-value=0.0038 Score=72.90 Aligned_cols=100 Identities=15% Similarity=0.172 Sum_probs=74.2
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++++.||+||+|+-++-|.|.-.+|. .|.+|-+|..-.+++|+.+.++||..++--= =| .+|.||..
T Consensus 82 hry~EDi~lmk~lG~~~YRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~L~~~GIeP~VTL~-----H~---dlP~~L~~ 153 (497)
T PLN02998 82 HKYKEDVKLMADMGLEAYRFSISWSRLLPSGRGPINPKGLQYYNNLIDELITHGIQPHVTLH-----HF---DLPQALED 153 (497)
T ss_pred HhhHHHHHHHHHcCCCeEEeeccHHhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCceEEEec-----CC---CCCHHHHH
Confidence 458999999999999999999999999997 6789999999999999999999998554321 12 47999975
Q ss_pred C-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 137 M-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 137 ~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
. -+=. -|..=..|.++++.-++++..+++
T Consensus 154 ~yGGW~-n~~~v~~F~~YA~~~~~~fgdrVk 183 (497)
T PLN02998 154 EYGGWL-SQEIVRDFTAYADTCFKEFGDRVS 183 (497)
T ss_pred hhCCcC-CchHHHHHHHHHHHHHHHhcCcCC
Confidence 3 4432 222224455555555555555554
No 37
>PF02837 Glyco_hydro_2_N: Glycosyl hydrolases family 2, sugar binding domain; InterPro: IPR006104 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. This domain has a jelly-roll fold [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DEC_A 3OB8_A 3OBA_A 3CMG_A 3FN9_C 2VZU_A 2X09_A 2VZO_A 2X05_A 2VZV_B ....
Probab=96.26 E-value=0.011 Score=58.39 Aligned_cols=66 Identities=29% Similarity=0.502 Sum_probs=49.6
Q ss_pred ccceEEEEEEEcCCCC--CceEEEeCCc-eeEEEEEcCeeecccccccccccCCCCCCCcCCCCCCCCCcccCCCCCCce
Q 036343 589 RRMTWYKTTFEAPLEN--DPVVLNLQGM-GKGFAWVNGYNLGRYWPTYLAEEDGCSTESCDYRGPYGSDKCAYNCGNPSQ 665 (795)
Q Consensus 589 ~~p~~yk~~F~~p~~~--dp~~Ld~~g~-gKG~vwVNG~nLGRYW~~~~~~~~Gc~~~~~~~G~~~~~~~~~~~~~~PQq 665 (795)
.+..|||.+|++|+.. ..++|.+.|. ....|||||+.+|+-.. + |. |
T Consensus 67 ~~~~wYr~~f~lp~~~~~~~~~L~f~gv~~~a~v~vNG~~vg~~~~-------~----------~~-----------~-- 116 (167)
T PF02837_consen 67 SGYAWYRRTFTLPADWKGKRVFLRFEGVDYAAEVYVNGKLVGSHEG-------G----------YT-----------P-- 116 (167)
T ss_dssp CSEEEEEEEEEESGGGTTSEEEEEESEEESEEEEEETTEEEEEEES-------T----------TS--------------
T ss_pred CceEEEEEEEEeCchhcCceEEEEeccceEeeEEEeCCeEEeeeCC-------C----------cC-----------C--
Confidence 4679999999999743 4589999987 48999999999998541 1 11 2
Q ss_pred eEEecCcccccCCc-ceEEEE
Q 036343 666 IWYHVPRSWIKDGV-NTLVLF 685 (795)
Q Consensus 666 tlY~VP~~~Lk~g~-N~Ivvf 685 (795)
.-+-|+. .|++|. |+|.|.
T Consensus 117 ~~~dIt~-~l~~g~~N~l~V~ 136 (167)
T PF02837_consen 117 FEFDITD-YLKPGEENTLAVR 136 (167)
T ss_dssp EEEECGG-GSSSEEEEEEEEE
T ss_pred eEEeChh-hccCCCCEEEEEE
Confidence 2355765 799988 988874
No 38
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=96.21 E-value=0.051 Score=54.63 Aligned_cols=128 Identities=12% Similarity=0.107 Sum_probs=80.4
Q ss_pred CCCCCCChHHHHHHHHHcCCCEEEecccccccC-----Cc---CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 53 PRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHE-----PL---RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 53 ~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hE-----p~---~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
-.++++.|+.+|+.||++|+|+|=+- |...+ |. ++.|.-.....|+.+|++|++.||+|.+..+
T Consensus 15 ~~~~~~~W~~~~~~m~~~GidtlIlq--~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~Gl~------ 86 (166)
T PF14488_consen 15 QNWTPAQWREEFRAMKAIGIDTLILQ--WTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVGLY------ 86 (166)
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEE--EeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEeCC------
Confidence 46899999999999999999998432 32222 11 2233334456899999999999999998853
Q ss_pred eCCCCcccccccCCCcccccCCChhH-HHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcccHHHHH
Q 036343 125 WNYGGFPVWLHNMPGIEELRTTNKVF-MNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYIN 203 (795)
Q Consensus 125 w~~GG~P~WL~~~p~~~~~R~~d~~y-~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~ 203 (795)
--|.|... .|+.. .+.-++..++|..+...|+ ..-++=|=.|..... ....++.+
T Consensus 87 ----~~~~~w~~---------~~~~~~~~~~~~v~~el~~~yg~h~-------sf~GWYip~E~~~~~----~~~~~~~~ 142 (166)
T PF14488_consen 87 ----FDPDYWDQ---------GDLDWEAERNKQVADELWQRYGHHP-------SFYGWYIPYEIDDYN----WNAPERFA 142 (166)
T ss_pred ----CCchhhhc---------cCHHHHHHHHHHHHHHHHHHHcCCC-------CCceEEEecccCCcc----cchHHHHH
Confidence 12344431 12222 2223345555555555443 566777778876532 23456667
Q ss_pred HHHHHhhcC
Q 036343 204 WCAKMATSL 212 (795)
Q Consensus 204 ~l~~~~~~~ 212 (795)
.|.+.+++.
T Consensus 143 ~l~~~lk~~ 151 (166)
T PF14488_consen 143 LLGKYLKQI 151 (166)
T ss_pred HHHHHHHHh
Confidence 777666653
No 39
>PLN02814 beta-glucosidase
Probab=96.20 E-value=0.005 Score=72.05 Aligned_cols=100 Identities=18% Similarity=0.184 Sum_probs=72.8
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++++.||++|+|+-++-|.|.-.+|. +|.+|-+|..-.+++|+.+.++||..++--= =| -+|.||.+
T Consensus 77 hry~EDI~L~k~lG~~ayRfSIsWsRI~P~G~g~~N~~Gl~fY~~lId~l~~~GI~P~VTL~-----H~---dlP~~L~~ 148 (504)
T PLN02814 77 HKYKEDVKLMAEMGLESFRFSISWSRLIPNGRGLINPKGLLFYKNLIKELRSHGIEPHVTLY-----HY---DLPQSLED 148 (504)
T ss_pred HhhHHHHHHHHHcCCCEEEEeccHhhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCceEEEec-----CC---CCCHHHHH
Confidence 458999999999999999999999999996 6889999999999999999999998654421 13 37999976
Q ss_pred C-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 137 M-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 137 ~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
. -+=. -|..-..|.++++.-++++..+++
T Consensus 149 ~yGGW~-n~~~i~~F~~YA~~~f~~fgdrVk 178 (504)
T PLN02814 149 EYGGWI-NRKIIEDFTAFADVCFREFGEDVK 178 (504)
T ss_pred hcCCcC-ChhHHHHHHHHHHHHHHHhCCcCC
Confidence 3 3432 122223344444444444444443
No 40
>TIGR01233 lacG 6-phospho-beta-galactosidase. This enzyme is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation.
Probab=96.17 E-value=0.024 Score=65.93 Aligned_cols=103 Identities=12% Similarity=0.195 Sum_probs=76.0
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++++.||++|+|+-++-|.|.-.+|. +|++|=+|..-.+++|+.+.++||..++--= + | .+|.||.+
T Consensus 53 hry~eDi~L~~~lG~~~yRfSIsWsRI~P~g~~~~N~~gl~~Y~~lid~l~~~GI~P~VTL~---H--~---dlP~~L~~ 124 (467)
T TIGR01233 53 HKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEVNEKGVEFYHKLFAECHKRHVEPFVTLH---H--F---DTPEALHS 124 (467)
T ss_pred hhHHHHHHHHHHcCCCEEEEecchhhccCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEecc---C--C---CCcHHHHH
Confidence 457899999999999999999999999996 6788889999999999999999998665431 1 2 48999976
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhcccccc
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFAS 173 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~ 173 (795)
.-+=. ++...++-.+|.+.+++++++-++..+
T Consensus 125 ~GGW~-----n~~~v~~F~~YA~~~f~~fgdVk~WiT 156 (467)
T TIGR01233 125 NGDFL-----NRENIEHFIDYAAFCFEEFPEVNYWTT 156 (467)
T ss_pred cCCCC-----CHHHHHHHHHHHHHHHHHhCCCCEEEE
Confidence 53332 344445555555555555543233333
No 41
>PRK13511 6-phospho-beta-galactosidase; Provisional
Probab=96.15 E-value=0.016 Score=67.46 Aligned_cols=96 Identities=15% Similarity=0.168 Sum_probs=71.7
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++++.||++|+|+-++-|.|.-.+|. .|.+|-+|....+++|+.+.++||.-++--= -=.+|.||.+
T Consensus 54 ~ry~eDi~L~~~lG~~~yRfSIsWsRI~P~G~g~vN~~gl~~Y~~lid~l~~~GI~P~VTL~--------H~dlP~~L~~ 125 (469)
T PRK13511 54 HRYPEDLKLAEEFGVNGIRISIAWSRIFPDGYGEVNPKGVEYYHRLFAECHKRHVEPFVTLH--------HFDTPEALHS 125 (469)
T ss_pred hhhHHHHHHHHHhCCCEEEeeccHhhcCcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEec--------CCCCcHHHHH
Confidence 457899999999999999999999999997 5789999999999999999999998554421 1148999976
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.-+=. ++...++-.+|.+.+++++.
T Consensus 126 ~GGW~-----n~~~v~~F~~YA~~~~~~fg 150 (469)
T PRK13511 126 NGDWL-----NRENIDHFVRYAEFCFEEFP 150 (469)
T ss_pred cCCCC-----CHHHHHHHHHHHHHHHHHhC
Confidence 43322 34444444444444444443
No 42
>PRK09593 arb 6-phospho-beta-glucosidase; Reviewed
Probab=96.06 E-value=0.0087 Score=69.69 Aligned_cols=100 Identities=15% Similarity=0.154 Sum_probs=74.5
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..|+++++.||++|+|+-++-|.|.-.+|. +|++|=+|..-.+++|+.+.++||..++--= =| .+|.||.
T Consensus 73 hry~eDi~Lm~~lG~~aYRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lId~L~~~GI~P~VTL~-----H~---dlP~~L~ 144 (478)
T PRK09593 73 HHYKEDIALFAEMGFKTYRMSIAWTRIFPKGDELEPNEAGLQFYEDIFKECHKYGIEPLVTIT-----HF---DCPMHLI 144 (478)
T ss_pred HhhHHHHHHHHHcCCCEEEEecchhhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEec-----cc---CCCHHHH
Confidence 458999999999999999999999999997 6778989999999999999999998554320 12 4899997
Q ss_pred cC-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NM-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.. -+-. -|..=..|.++++.-++++..+++
T Consensus 145 ~~~GGW~-n~~~v~~F~~YA~~~~~~fgdrVk 175 (478)
T PRK09593 145 EEYGGWR-NRKMVGFYERLCRTLFTRYKGLVK 175 (478)
T ss_pred hhcCCCC-ChHHHHHHHHHHHHHHHHhcCcCC
Confidence 53 4443 222224455555555555555554
No 43
>PRK10340 ebgA cryptic beta-D-galactosidase subunit alpha; Reviewed
Probab=95.80 E-value=0.031 Score=70.89 Aligned_cols=93 Identities=19% Similarity=0.196 Sum_probs=66.6
Q ss_pred cEEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCccEEEEEEeecCc
Q 036343 437 DYLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGKNQISLLSATVGL 516 (795)
Q Consensus 437 GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~n~L~ILVEn~GR 516 (795)
|--|||++|.++..- .+....|.+.++...++|||||++||...+... .+.++++--|+.|.|+|.|.|.+..-
T Consensus 109 ~~g~Yrr~F~lp~~~----~gkrv~L~FeGV~s~a~VwvNG~~VG~~~g~~~--pfefDIT~~l~~G~N~LaV~V~~~~d 182 (1021)
T PRK10340 109 PTGAYQRTFTLSDGW----QGKQTIIKFDGVETYFEVYVNGQYVGFSKGSRL--TAEFDISAMVKTGDNLLCVRVMQWAD 182 (1021)
T ss_pred CeEEEEEEEEeCccc----ccCcEEEEECccceEEEEEECCEEeccccCCCc--cEEEEcchhhCCCccEEEEEEEecCC
Confidence 567999999886532 234578999999999999999999998765433 24455544467788999999975432
Q ss_pred ccccCCCcc----cCCCCCCCeEEEe
Q 036343 517 QNYGSKFDM----VPNGIPGPVLLVG 538 (795)
Q Consensus 517 vNyG~~l~~----~~KGI~g~V~l~~ 538 (795)
|..+++ ..-||..+|.|..
T Consensus 183 ---~s~le~qd~w~~sGI~R~V~L~~ 205 (1021)
T PRK10340 183 ---STYLEDQDMWWLAGIFRDVYLVG 205 (1021)
T ss_pred ---CCccccCCccccccccceEEEEE
Confidence 222322 2479999999954
No 44
>PLN02849 beta-glucosidase
Probab=95.71 E-value=0.012 Score=68.89 Aligned_cols=100 Identities=20% Similarity=0.209 Sum_probs=72.9
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
..|+++++.||++|+|+-++-|.|.-.+|. .|.+|=+|....+++|+.+.++||.-++--= =| -+|.||.+
T Consensus 79 hrY~eDI~Lm~~lG~~aYRfSIsWsRI~P~G~g~vN~~gl~fY~~lid~l~~~GI~P~VTL~-----H~---dlP~~L~~ 150 (503)
T PLN02849 79 HKYKEDVKLMVETGLDAFRFSISWSRLIPNGRGSVNPKGLQFYKNFIQELVKHGIEPHVTLF-----HY---DHPQYLED 150 (503)
T ss_pred HhHHHHHHHHHHcCCCeEEEeccHHhcCcCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeec-----CC---CCcHHHHH
Confidence 358899999999999999999999999997 4788999999999999999999998554321 12 47999976
Q ss_pred C-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 137 M-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 137 ~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
. -+=. =|..-..|.++++.-++++..+++
T Consensus 151 ~yGGW~-nr~~v~~F~~YA~~~f~~fgDrVk 180 (503)
T PLN02849 151 DYGGWI-NRRIIKDFTAYADVCFREFGNHVK 180 (503)
T ss_pred hcCCcC-CchHHHHHHHHHHHHHHHhcCcCC
Confidence 3 4432 122223455555555555544444
No 45
>PRK09589 celA 6-phospho-beta-glucosidase; Reviewed
Probab=95.69 E-value=0.014 Score=68.02 Aligned_cols=100 Identities=17% Similarity=0.164 Sum_probs=73.6
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..|+++++.||+||+|+-++-|.|.-.+|. +|++|=+|....+++|+.+.++||..++--= =| -+|.||.
T Consensus 67 hry~eDi~Lm~~lG~~~yRfSIsWsRI~P~G~~~~~N~~gl~~Y~~lid~L~~~GI~P~VTL~-----H~---dlP~~L~ 138 (476)
T PRK09589 67 HRYKEDIALFAEMGFKCFRTSIAWTRIFPQGDELEPNEEGLQFYDDLFDECLKQGIEPVVTLS-----HF---EMPYHLV 138 (476)
T ss_pred HhhHHHHHHHHHcCCCEEEeccchhhcCcCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEec-----CC---CCCHHHH
Confidence 458999999999999999999999999997 6678989999999999999999998554421 12 4899997
Q ss_pred cC-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NM-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.. -+-. -|..-..|.++++.-++++..+++
T Consensus 139 ~~yGGW~-n~~~i~~F~~YA~~~f~~fgdrVk 169 (476)
T PRK09589 139 TEYGGWR-NRKLIDFFVRFAEVVFTRYKDKVK 169 (476)
T ss_pred HhcCCcC-ChHHHHHHHHHHHHHHHHhcCCCC
Confidence 53 4433 222224455555555555555554
No 46
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism]
Probab=95.47 E-value=0.12 Score=55.71 Aligned_cols=113 Identities=21% Similarity=0.279 Sum_probs=77.7
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHH---HcCcEEEEecCceeeeeeCCCCccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQ---DQGLYVILRIGPYVCAEWNYGGFPVWL 134 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~---~~gL~vilrpGPyicaEw~~GG~P~WL 134 (795)
..-+|.|+-+|+.|+|.|++-| ||.---..|.=-=.|+.|+.+.|++|+ +.||+|+|.+= .-.|-
T Consensus 63 g~~qD~~~iLK~~GvNyvRlRv-wndP~dsngn~yggGnnD~~k~ieiakRAk~~GmKVl~dFH-----------YSDfw 130 (403)
T COG3867 63 GVRQDALQILKNHGVNYVRLRV-WNDPYDSNGNGYGGGNNDLKKAIEIAKRAKNLGMKVLLDFH-----------YSDFW 130 (403)
T ss_pred ChHHHHHHHHHHcCcCeEEEEE-ecCCccCCCCccCCCcchHHHHHHHHHHHHhcCcEEEeecc-----------chhhc
Confidence 3457999999999999999876 666544455544567899999998875 47999999862 11222
Q ss_pred ccCCCcc--c---ccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccccccc
Q 036343 135 HNMPGIE--E---LRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGN 189 (795)
Q Consensus 135 ~~~p~~~--~---~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~ 189 (795)
. +|+-+ | .--+-..-.+++-.|.+..+..++++ |=-+=||||-||--.
T Consensus 131 a-DPakQ~kPkaW~~l~fe~lk~avy~yTk~~l~~m~~e------Gi~pdmVQVGNEtn~ 183 (403)
T COG3867 131 A-DPAKQKKPKAWENLNFEQLKKAVYSYTKYVLTTMKKE------GILPDMVQVGNETNG 183 (403)
T ss_pred c-ChhhcCCcHHhhhcCHHHHHHHHHHHHHHHHHHHHHc------CCCccceEeccccCC
Confidence 1 23211 0 11223445677888999999988854 445679999999753
No 47
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=95.21 E-value=0.065 Score=68.00 Aligned_cols=95 Identities=18% Similarity=0.199 Sum_probs=64.9
Q ss_pred ccEEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCccEEEEEEeecC
Q 036343 436 SDYLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGKNQISLLSATVG 515 (795)
Q Consensus 436 ~GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~n~L~ILVEn~G 515 (795)
.+-.|||+++.++.+- . +.....|.+.++.-.+.|||||+++|...+... .+.++++-.|+.|.|+|.|.|..--
T Consensus 119 n~~gwYrr~F~vp~~w--~-~~~rv~L~FeGV~~~a~VwvNG~~VG~~~g~~~--pfefDIT~~l~~G~N~L~V~V~~~s 193 (1027)
T PRK09525 119 NPTGCYSLTFTVDESW--L-QSGQTRIIFDGVNSAFHLWCNGRWVGYSQDSRL--PAEFDLSPFLRAGENRLAVMVLRWS 193 (1027)
T ss_pred CCeEEEEEEEEeChhh--c-CCCeEEEEECeeccEEEEEECCEEEEeecCCCc--eEEEEChhhhcCCccEEEEEEEecC
Confidence 3678999999886531 1 111468999999999999999999998764332 2445554446778899999885321
Q ss_pred cccccCCCcc----cCCCCCCCeEEEe
Q 036343 516 LQNYGSKFDM----VPNGIPGPVLLVG 538 (795)
Q Consensus 516 RvNyG~~l~~----~~KGI~g~V~l~~ 538 (795)
-|.++++ ...||..+|.|..
T Consensus 194 ---dgs~~e~qd~w~~sGI~R~V~L~~ 217 (1027)
T PRK09525 194 ---DGSYLEDQDMWRMSGIFRDVSLLH 217 (1027)
T ss_pred ---CCCccccCCceeeccccceEEEEE
Confidence 1222322 2369999999854
No 48
>PRK09936 hypothetical protein; Provisional
Probab=95.20 E-value=0.051 Score=58.72 Aligned_cols=58 Identities=24% Similarity=0.414 Sum_probs=47.2
Q ss_pred CCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc-hHHHHHHHHHHHcCcEEEEe
Q 036343 53 PRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN-LDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 53 ~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~-~dl~~fl~~a~~~gL~vilr 116 (795)
.+++++.|+.+++.+++.|++|+= |=|...--+ ||.+. .+|.+.++.|++.||.|+|.
T Consensus 33 ~~~~~~qWq~~~~~~~~~G~~tLi--vQWt~yG~~----~fg~~~g~La~~l~~A~~~Gl~v~vG 91 (296)
T PRK09936 33 SQVTDTQWQGLWSQLRLQGFDTLV--VQWTRYGDA----DFGGQRGWLAKRLAAAQQAGLKLVVG 91 (296)
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEE--EEeeeccCC----CcccchHHHHHHHHHHHHcCCEEEEc
Confidence 367999999999999999999874 456544111 88764 59999999999999999876
No 49
>PF14871 GHL6: Hypothetical glycosyl hydrolase 6
Probab=94.90 E-value=0.13 Score=49.76 Aligned_cols=99 Identities=12% Similarity=0.084 Sum_probs=65.7
Q ss_pred HHHHHHHHcCCCEEEeccc----c-----cccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccc
Q 036343 62 DLIKKAKEGGLDAIETYVF----W-----NAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPV 132 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~yv~----W-----n~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~ 132 (795)
+-++.+|++|.|+|.++.- | .+|.+.|+- ..+ -|.+++++|++.||.|+.|...- --|+..--.|.
T Consensus 4 ~~~~~lk~~~v~si~i~a~~h~g~ayYPt~~~~~hp~L-~~D---llge~v~a~h~~Girv~ay~~~~-~d~~~~~~HPe 78 (132)
T PF14871_consen 4 QFVDTLKEAHVNSITIFAKCHGGYAYYPTKVGPRHPGL-KRD---LLGEQVEACHERGIRVPAYFDFS-WDEDAAERHPE 78 (132)
T ss_pred HHHHHHHHhCCCEEEEEcccccEEEEccCCCCcCCCCC-CcC---HHHHHHHHHHHCCCEEEEEEeee-cChHHHHhCCc
Confidence 4567899999999999542 3 344555554 122 67999999999999999997644 22333345699
Q ss_pred ccccCCCccc------------ccCCChhHHHHHHHHHHHHHHHH
Q 036343 133 WLHNMPGIEE------------LRTTNKVFMNEMQNFTTLIVDMA 165 (795)
Q Consensus 133 WL~~~p~~~~------------~R~~d~~y~~~~~~~~~~l~~~~ 165 (795)
|+..+++-.+ .-..+.+|++.+.+-+++++.++
T Consensus 79 W~~~~~~G~~~~~~~~~~~~~~~~c~ns~Y~e~~~~~i~Ei~~~y 123 (132)
T PF14871_consen 79 WFVRDADGRPMRGERFGYPGWYTCCLNSPYREFLLEQIREILDRY 123 (132)
T ss_pred eeeECCCCCCcCCCCcCCCCceecCCCccHHHHHHHHHHHHHHcC
Confidence 9986544210 11335678887777777666544
No 50
>COG2723 BglB Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism]
Probab=94.25 E-value=0.057 Score=62.01 Aligned_cols=96 Identities=20% Similarity=0.340 Sum_probs=72.3
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCce--eeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQ--YDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~--~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
..++++++.||+||+|+.|+-|.|.-.-|..+. .|=.|..-.+++++.|.++||.-++--- =| -+|.||.
T Consensus 59 hrYkeDi~L~~emG~~~~R~SI~WsRIfP~g~~~e~N~~gl~fY~~l~del~~~gIep~vTL~-----Hf---d~P~~L~ 130 (460)
T COG2723 59 HRYKEDIALAKEMGLNAFRTSIEWSRIFPNGDGGEVNEKGLRFYDRLFDELKARGIEPFVTLY-----HF---DLPLWLQ 130 (460)
T ss_pred hhhHHHHHHHHHcCCCEEEeeeeEEEeecCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEec-----cc---CCcHHHh
Confidence 347899999999999999999999999997655 8888999999999999999999665431 12 3799998
Q ss_pred cC-CCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 136 NM-PGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 136 ~~-p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
+. -+=. +..-.++-.+|.+.+++++.
T Consensus 131 ~~ygGW~-----nR~~i~~F~~ya~~vf~~f~ 157 (460)
T COG2723 131 KPYGGWE-----NRETVDAFARYAATVFERFG 157 (460)
T ss_pred hccCCcc-----CHHHHHHHHHHHHHHHHHhc
Confidence 74 3432 33344455555555655555
No 51
>TIGR01515 branching_enzym alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase. A sequence from Arabidopsis thaliana, GP|9294564, scores just above trusted, but appears either to contain corrupt sequence or, more likely, to be a pseudogene as some of the conserved catalytic residues common to the alpha amylase family are not conserved here.
Probab=92.41 E-value=1.7 Score=52.57 Aligned_cols=52 Identities=27% Similarity=0.302 Sum_probs=39.1
Q ss_pred HHHHHcCCCEEEe-cccccccCCcCcee----------eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 65 KKAKEGGLDAIET-YVFWNAHEPLRRQY----------DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 65 ~k~ka~G~N~V~~-yv~Wn~hEp~~G~~----------df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.-+|++|+|+|.+ +|+.+-....= -| .|....||.+|++.|+++||.|||..
T Consensus 164 dyl~~LGvt~i~L~Pi~e~~~~~~w-GY~~~~y~~~~~~~Gt~~dlk~lV~~~H~~Gi~VilD~ 226 (613)
T TIGR01515 164 PYVKELGFTHIELLPVAEHPFDGSW-GYQVTGYYAPTSRFGTPDDFMYFVDACHQAGIGVILDW 226 (613)
T ss_pred HHHHHcCCCEEEECCcccCCCCCCC-CCCcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 6779999999999 77754211100 12 35566799999999999999999985
No 52
>PF02638 DUF187: Glycosyl hydrolase like GH101; InterPro: IPR003790 This entry describes proteins of unknown function.
Probab=91.61 E-value=0.93 Score=50.09 Aligned_cols=117 Identities=17% Similarity=0.201 Sum_probs=70.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccccc-------ccCCc-------Cce-eeccCchHHHHHHHHHHHcCcEEEEecCce
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWN-------AHEPL-------RRQ-YDFTGNLDLIRFIKTIQDQGLYVILRIGPY 120 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn-------~hEp~-------~G~-~df~g~~dl~~fl~~a~~~gL~vilrpGPy 120 (795)
.++.-++.|++++++|||+|=.-|-+. -.+|. +|+ -.|+ -|+.+|+.|++.||.|..+. .+
T Consensus 17 ~~~~~~~~l~~l~~~~~N~V~~qVr~~gda~Y~S~~~p~s~~~~g~~~~~pg~D---pL~~~I~eaHkrGlevHAW~-~~ 92 (311)
T PF02638_consen 17 SKEQIDEMLDDLKSAGFNAVFVQVRPRGDALYPSDIEPWSGYLTGKQGKDPGFD---PLEFMIEEAHKRGLEVHAWF-RV 92 (311)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEEeCcEEEecccccccccccCCCCCCCCCcc---HHHHHHHHHHHcCCEEEEEE-Ee
Confidence 556678899999999999997666542 22221 111 0144 79999999999999999776 11
Q ss_pred eeeeeCC----CCcccccc-cCCCcccccC----CChhH----HHHHHHHHHHHHHHHH-hccccccCCCcEEEeeccc
Q 036343 121 VCAEWNY----GGFPVWLH-NMPGIEELRT----TNKVF----MNEMQNFTTLIVDMAK-KEKLFASQGGPIILAQIEN 185 (795)
Q Consensus 121 icaEw~~----GG~P~WL~-~~p~~~~~R~----~d~~y----~~~~~~~~~~l~~~~~-~~~~~~~~gGpII~~QiEN 185 (795)
-..--+. -..|.|+. +.++.. ... .+..| ..+|+.|+..++..|. ++ +|=+||++-
T Consensus 93 ~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~lnP~~PeVr~~i~~~v~Eiv~~Y--------dvDGIhlDd 162 (311)
T PF02638_consen 93 GFNAPDVSHILKKHPEWFAVNHPGWV-RTYEDANGGYYWLNPGHPEVRDYIIDIVKEIVKNY--------DVDGIHLDD 162 (311)
T ss_pred ecCCCchhhhhhcCchhheecCCCce-eecccCCCCceEECCCCHHHHHHHHHHHHHHHhcC--------CCCeEEecc
Confidence 1100011 12488876 456543 222 12222 3567777666666554 33 466889873
No 53
>smart00642 Aamy Alpha-amylase domain.
Probab=91.03 E-value=0.58 Score=46.98 Aligned_cols=65 Identities=17% Similarity=0.193 Sum_probs=45.1
Q ss_pred hHHHHHHHHHcCCCEEEecccccccC-------CcCcee-----eccCchHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHE-------PLRRQY-----DFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hE-------p~~G~~-----df~g~~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
+.+.|.-+|++|+|+|.+-=++...+ -.+..| .|....++.++++.|+++||.||+..=|-=++.
T Consensus 21 i~~~l~yl~~lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~~~ 97 (166)
T smart00642 21 IIEKLDYLKDLGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHTSD 97 (166)
T ss_pred HHHHHHHHHHCCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCCCC
Confidence 44566779999999998854332221 122222 456678999999999999999999874444333
No 54
>TIGR00542 hxl6Piso_put hexulose-6-phosphate isomerase, putative. This family is conserved at better than 40 % identity among the four known examples from three species: Escherichia coli (SgbU and SgaU), Haemophilus influenzae, and Mycoplasma pneumoniae. The rarity of the family, high level of conservation, and proposed catabolic role suggests lateral transfer may be a part of the evolutionary history of this protein.
Probab=89.22 E-value=5.4 Score=42.81 Aligned_cols=127 Identities=16% Similarity=0.280 Sum_probs=76.4
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEE-EecCceeeeeeCCCCcccccc
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVI-LRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vi-lrpGPyicaEw~~GG~P~WL~ 135 (795)
...|++.|+.++++|++.|++.+. .. ...+...+++ ..++.++.++++++||.|. +.+++ .+.+|
T Consensus 15 ~~~~~e~l~~~~~~G~~~VEl~~~-~~-~~~~~~~~~~-~~~~~~~~~~l~~~gl~i~~~~~~~-------~~~~~---- 80 (279)
T TIGR00542 15 GECWLERLQLAKTCGFDFVEMSVD-ET-DDRLSRLDWS-REQRLALVNAIIETGVRIPSMCLSA-------HRRFP---- 80 (279)
T ss_pred CCCHHHHHHHHHHcCCCEEEEecC-Cc-cchhhccCCC-HHHHHHHHHHHHHcCCCceeeecCC-------CccCc----
Confidence 467999999999999999999532 22 2223444554 3578999999999999874 44321 01111
Q ss_pred cCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCccc-------HHHHHHHHHH
Q 036343 136 NMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAG-------KSYINWCAKM 208 (795)
Q Consensus 136 ~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~-------~~y~~~l~~~ 208 (795)
+-+.|+.-+++..+.+++.++..+ .+ |.++|.+- ..++. ++..+ .+.++.|.+.
T Consensus 81 -------l~~~~~~~r~~~~~~~~~~i~~a~--~l----G~~~v~~~-~~~~~-----~~~~~~~~~~~~~~~l~~l~~~ 141 (279)
T TIGR00542 81 -------LGSKDKAVRQQGLEIMEKAIQLAR--DL----GIRTIQLA-GYDVY-----YEEHDEETRRRFREGLKEAVEL 141 (279)
T ss_pred -------CCCcCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEec-Ccccc-----cCcCCHHHHHHHHHHHHHHHHH
Confidence 223356666666677777777776 33 56776542 11110 11111 2455666667
Q ss_pred hhcCCCcc
Q 036343 209 ATSLDIGV 216 (795)
Q Consensus 209 ~~~~g~~v 216 (795)
+++.|+.+
T Consensus 142 A~~~Gv~l 149 (279)
T TIGR00542 142 AARAQVTL 149 (279)
T ss_pred HHHcCCEE
Confidence 77777653
No 55
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=87.68 E-value=5.2 Score=42.75 Aligned_cols=131 Identities=16% Similarity=0.226 Sum_probs=75.4
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEE-EecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVI-LRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vi-lrpGPyicaEw~~GG~P~WL~~ 136 (795)
-.|++.++.++++|+..|++.+. ..|+ .....+|+ ..++..+.++++++||.|. +.++ +.-.+
T Consensus 16 ~~~~e~~~~~~~~G~~~iEl~~~-~~~~-~~~~~~~~-~~~~~~l~~~l~~~Gl~i~~~~~~----------~~~~~--- 79 (284)
T PRK13210 16 LSWEERLVFAKELGFDFVEMSVD-ESDE-RLARLDWS-KEERLSLVKAIYETGVRIPSMCLS----------GHRRF--- 79 (284)
T ss_pred CCHHHHHHHHHHcCCCeEEEecC-Cccc-ccccccCC-HHHHHHHHHHHHHcCCCceEEecc----------cccCc---
Confidence 46999999999999999999643 2222 11122333 3479999999999999875 3222 11001
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccccccccc--ccCCcccHHHHHHHHHHhhcCCC
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVM--SDYGDAGKSYINWCAKMATSLDI 214 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~--~~~~~~~~~y~~~l~~~~~~~g~ 214 (795)
. +.+.|+..+++..+.++++++..+ -+ |.++|-+---..+.... ..+ ..-.+.++.|.+++++.|+
T Consensus 80 ----~-~~~~d~~~r~~~~~~~~~~i~~a~--~l----G~~~v~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv 147 (284)
T PRK13210 80 ----P-FGSRDPATRERALEIMKKAIRLAQ--DL----GIRTIQLAGYDVYYEEKSEETR-QRFIEGLAWAVEQAAAAQV 147 (284)
T ss_pred ----C-CCCCCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEECCcccccccccHHHH-HHHHHHHHHHHHHHHHhCC
Confidence 0 345566666666667777777666 32 45666442100000000 000 0123567778888888887
Q ss_pred cc
Q 036343 215 GV 216 (795)
Q Consensus 215 ~v 216 (795)
.+
T Consensus 148 ~l 149 (284)
T PRK13210 148 ML 149 (284)
T ss_pred EE
Confidence 54
No 56
>smart00812 Alpha_L_fucos Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site PUBMED:. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis.
Probab=87.56 E-value=58 Score=37.23 Aligned_cols=235 Identities=13% Similarity=0.160 Sum_probs=122.3
Q ss_pred CCCCCCChHHHHHHHHHcCCCEEEe-------cccccccCCcCceeecc-CchHHHHHHHHHHHcCcEEEEecCceeee-
Q 036343 53 PRSTPGMWPDLIKKAKEGGLDAIET-------YVFWNAHEPLRRQYDFT-GNLDLIRFIKTIQDQGLYVILRIGPYVCA- 123 (795)
Q Consensus 53 ~r~~~~~W~~~l~k~ka~G~N~V~~-------yv~Wn~hEp~~G~~df~-g~~dl~~fl~~a~~~gL~vilrpGPyica- 123 (795)
.+..++.| .+.+|++|+..|-. +-.|.-....-..-+-. +..-|.+|.+.|+++||++-+ |.-.
T Consensus 79 ~~fD~~~W---a~~~k~AGakY~vlTaKHHDGF~lw~S~~t~~n~~~~~pkrDiv~el~~A~rk~Glk~G~----Y~S~~ 151 (384)
T smart00812 79 EKFDPEEW---ADLFKKAGAKYVVLTAKHHDGFCLWDSKYSNWNAVDTGPKRDLVGELADAVRKRGLKFGL----YHSLF 151 (384)
T ss_pred hhCCHHHH---HHHHHHcCCCeEEeeeeecCCccccCCCCCCCcccCCCCCcchHHHHHHHHHHcCCeEEE----EcCHH
Confidence 33455555 46788899985532 12254443221111211 223567788999999997766 4433
Q ss_pred eeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcccHHHHH
Q 036343 124 EWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYIN 203 (795)
Q Consensus 124 Ew~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~ 203 (795)
+|.. |.|....+... .+.+.+.|.++++.|+.+|.+.+.++ ||-|++- +-..+.. ...--++
T Consensus 152 DW~~---p~y~~~~~~~~-~~~~~~~~~~y~~~~~~Ql~ELit~Y-------gpd~lWf-D~~~~~~------~~~~~~~ 213 (384)
T smart00812 152 DWFN---PLYAGPTSSDE-DPDNWPRFQEFVDDWLPQLRELVTRY-------KPDLLWF-DGGWEAP------DDYWRSK 213 (384)
T ss_pred HhCC---Ccccccccccc-ccccchhHHHHHHHHHHHHHHHHhcC-------CCceEEE-eCCCCCc------cchhcHH
Confidence 5643 54432211111 34556788999988888888888743 3444442 2222111 1111134
Q ss_pred HHHHHhhcCCCcc--ceeeeCCC----CCCCCCCC---CCCC----CCCc-eecccccccccccCC-CCCCCCHHHHHHH
Q 036343 204 WCAKMATSLDIGV--PWIMCQES----DAPSPMFT---PNNP----NSPK-IWTENWTGWFKSWGG-KDPKRTAEDLAFA 268 (795)
Q Consensus 204 ~l~~~~~~~g~~v--p~~~~~~~----~~~~~~f~---~~~~----~~P~-~~~E~~~Gwf~~WG~-~~~~~~~~~~~~~ 268 (795)
.|.+++++...+. .++ ++.. ..+...+. ...| ..|- .|+-.-.+|+=+-++ ....++++++...
T Consensus 214 ~l~~~~~~~qP~~~~vvv-n~R~~~~~~~~g~~~~~~e~~~p~~~~~~pwE~~~ti~~sWgy~~~~~~~~~ks~~~li~~ 292 (384)
T smart00812 214 EFLAWLYNLSPVKDTVVV-NDRWGGTGCKHGGFYTDEERGAPGKLLPHPWETCTTIGKSWGYRRNESDSDYKSPKELIRD 292 (384)
T ss_pred HHHHHHHHhCCCCceEEE-EccccccCCCCCCcccCcccCCCCCCCCCCcccccccCCCCCcCCCCCcccCCCHHHHHHH
Confidence 5666666554332 122 2211 01111000 0111 1111 111111234433333 2336789999999
Q ss_pred HHHHHHcCCeeeeeeeeeccCCCCCCCCCCCccccccCCCCCCcCCCCCChhHHHHHHHHHHHHhhhccc
Q 036343 269 VARFFQFGGTFQNYYMYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLRELHKLLKSMEKTL 338 (795)
Q Consensus 269 ~~~~l~~g~s~~n~YM~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~tpKy~~lr~l~~~l~~~~~~l 338 (795)
+.+..++|++++ + | -+-+.+|.+....-..|+++...++...+.+
T Consensus 293 l~~~Vsk~GnlL---L----------N------------VgP~~dG~ip~~~~~~L~~iG~Wl~~ngeaI 337 (384)
T smart00812 293 LVDIVSKGGNLL---L----------N------------VGPKADGTIPEEEEERLLEIGKWLKVNGEAI 337 (384)
T ss_pred HhhhcCCCceEE---E----------c------------cCCCCCCCCCHHHHHHHHHHHHHHHhCCcee
Confidence 988888887642 2 2 2334678887777788999999888765543
No 57
>COG3934 Endo-beta-mannanase [Carbohydrate transport and metabolism]
Probab=87.27 E-value=0.42 Score=54.79 Aligned_cols=156 Identities=13% Similarity=0.137 Sum_probs=106.7
Q ss_pred EEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEeccccccc-CC---cCceeec-cCchHHHHHHHHHHHcC
Q 036343 36 ITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAH-EP---LRRQYDF-TGNLDLIRFIKTIQDQG 110 (795)
Q Consensus 36 ~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~h-Ep---~~G~~df-~g~~dl~~fl~~a~~~g 110 (795)
|.++++++..++..--+.++..++-+++|+.|+-+|++++++. -+- |+ ++|.-+- ++..-++.|++.|..++
T Consensus 4 F~Lg~n~wprIanikmw~~~~~~ei~~dle~a~~vg~k~lR~f---iLDgEdc~d~~G~~na~s~~~y~~~fla~a~~l~ 80 (587)
T COG3934 4 FALGLNRWPRIANIKMWPAIGNREIKADLEPAGFVGVKDLRLF---ILDGEDCRDKEGYRNAGSNVWYAAWFLAPAGYLD 80 (587)
T ss_pred EEeccccchhhhhhhHHHHhhhhhhhcccccccCccceeEEEE---EecCcchhhhhceecccccHHHHHHHhhhcccCc
Confidence 7777888777776666677777777889999999999999987 344 55 3343322 24568999999999999
Q ss_pred cEEEEecCceeeeeeCCCCcc---cccc-cCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccc
Q 036343 111 LYVILRIGPYVCAEWNYGGFP---VWLH-NMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENE 186 (795)
Q Consensus 111 L~vilrpGPyicaEw~~GG~P---~WL~-~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENE 186 (795)
|+|+++. |.+==.+||.= .|.. +.|+-. --|+.++..-++|...|++-++.+ ..|.+|-+-||
T Consensus 81 lkvlitl---ivg~~hmgg~Nw~Ipwag~~~pdn~---iyD~k~~~~~kkyvedlVk~yk~~-------ptI~gw~l~Ne 147 (587)
T COG3934 81 LKVLITL---IVGLKHMGGTNWRIPWAGEQSPDNV---IYDPKFRGPGKKYVEDLVKPYKLD-------PTIAGWALRNE 147 (587)
T ss_pred ceEEEEE---eecccccCcceeEeecCCCCCcccc---ccchhhcccHHHHHHHHhhhhccC-------hHHHHHHhcCC
Confidence 9998874 33322456642 2332 134321 236777777788888887766544 46888889999
Q ss_pred cccccccCCcccHHHHHHHHHHhh
Q 036343 187 YGNVMSDYGDAGKSYINWCAKMAT 210 (795)
Q Consensus 187 yg~~~~~~~~~~~~y~~~l~~~~~ 210 (795)
..... ...+..+++|+++|+-
T Consensus 148 --~lv~~-p~s~N~f~~w~~emy~ 168 (587)
T COG3934 148 --PLVEA-PISVNNFWDWSGEMYA 168 (587)
T ss_pred --ccccc-cCChhHHHHHHHHHHH
Confidence 33211 2356789999999964
No 58
>PRK05402 glycogen branching enzyme; Provisional
Probab=85.34 E-value=10 Score=46.80 Aligned_cols=53 Identities=23% Similarity=0.239 Sum_probs=37.4
Q ss_pred HHHHHcCCCEEEe-ccccc----ccCCcCcee-----eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 65 KKAKEGGLDAIET-YVFWN----AHEPLRRQY-----DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 65 ~k~ka~G~N~V~~-yv~Wn----~hEp~~G~~-----df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.-+|++|+|+|.. +|+=. -|--.+.-| .|....||.+|++.|+++||.|||..
T Consensus 273 ~ylk~LGv~~i~L~Pi~e~~~~~~~GY~~~~y~ai~~~~Gt~~dfk~lV~~~H~~Gi~VilD~ 335 (726)
T PRK05402 273 PYVKEMGFTHVELLPIAEHPFDGSWGYQPTGYYAPTSRFGTPDDFRYFVDACHQAGIGVILDW 335 (726)
T ss_pred HHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 6679999999998 45411 111111111 25567899999999999999999984
No 59
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=85.01 E-value=1.5 Score=51.34 Aligned_cols=60 Identities=13% Similarity=0.260 Sum_probs=43.4
Q ss_pred CChH---HHHHHHHHcCCCEEEec-ccccc-----cCCcCcee--------------eccCchHHHHHHHHHHHcCcEEE
Q 036343 58 GMWP---DLIKKAKEGGLDAIETY-VFWNA-----HEPLRRQY--------------DFTGNLDLIRFIKTIQDQGLYVI 114 (795)
Q Consensus 58 ~~W~---~~l~k~ka~G~N~V~~y-v~Wn~-----hEp~~G~~--------------df~g~~dl~~fl~~a~~~gL~vi 114 (795)
+.|. +.|.-+|++|+|+|-+- ++-+. |--.+--| .|....||.++++.|+++||+||
T Consensus 19 ~~~~~I~~kldyl~~LGvtaIwl~P~~~~~~~~~~hgY~~~D~~~~~~~~~~~~id~~fGt~~dl~~Li~~~H~~Gi~vi 98 (479)
T PRK09441 19 KLWNRLAERAPELAEAGITAVWLPPAYKGTSGGYDVGYGVYDLFDLGEFDQKGTVRTKYGTKEELLNAIDALHENGIKVY 98 (479)
T ss_pred cHHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCCCCCeecccccccccccCCcCcCcCCHHHHHHHHHHHHHCCCEEE
Confidence 4575 66788899999999884 55432 22222111 34456899999999999999999
Q ss_pred Eec
Q 036343 115 LRI 117 (795)
Q Consensus 115 lrp 117 (795)
|..
T Consensus 99 ~D~ 101 (479)
T PRK09441 99 ADV 101 (479)
T ss_pred EEE
Confidence 986
No 60
>PRK14706 glycogen branching enzyme; Provisional
Probab=84.89 E-value=11 Score=45.91 Aligned_cols=53 Identities=17% Similarity=0.222 Sum_probs=35.9
Q ss_pred HHHHHcCCCEEEe-ccc-------ccccCC--cCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 65 KKAKEGGLDAIET-YVF-------WNAHEP--LRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 65 ~k~ka~G~N~V~~-yv~-------Wn~hEp--~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.-+|++|+|+|+. +|. |...-- ..=.=.|....|+.+|++.|+++||.|||..
T Consensus 175 ~ylk~lG~t~velmPv~e~~~~~~wGY~~~~~~~~~~~~g~~~~~~~lv~~~H~~gi~VilD~ 237 (639)
T PRK14706 175 EYVTYMGYTHVELLGVMEHPFDGSWGYQVTGYYAPTSRLGTPEDFKYLVNHLHGLGIGVILDW 237 (639)
T ss_pred HHHHHcCCCEEEccchhcCCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 5689999999997 342 221100 0000123456899999999999999999875
No 61
>PRK12568 glycogen branching enzyme; Provisional
Probab=84.75 E-value=14 Score=45.64 Aligned_cols=55 Identities=22% Similarity=0.314 Sum_probs=39.6
Q ss_pred HHHHHHHcCCCEEEe-ccc-------ccccCCcCcee----eccCchHHHHHHHHHHHcCcEEEEecCc
Q 036343 63 LIKKAKEGGLDAIET-YVF-------WNAHEPLRRQY----DFTGNLDLIRFIKTIQDQGLYVILRIGP 119 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~-yv~-------Wn~hEp~~G~~----df~g~~dl~~fl~~a~~~gL~vilrpGP 119 (795)
.|.-+|++|+|+|+. +|+ |...- -|-| .|....++.+|++.|+++||.|||..=|
T Consensus 275 ll~ylk~LGvt~I~LmPi~e~~~~~~wGY~~--~~~~a~~~~~G~~~dfk~lV~~~H~~Gi~VIlD~V~ 341 (730)
T PRK12568 275 LIPYVQQLGFTHIELLPITEHPFGGSWGYQP--LGLYAPTARHGSPDGFAQFVDACHRAGIGVILDWVS 341 (730)
T ss_pred HHHHHHHcCCCEEEECccccCCCCCCCCCCC--CcCCccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 357789999999987 453 32210 0111 3556689999999999999999998643
No 62
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=84.74 E-value=1.1 Score=47.78 Aligned_cols=57 Identities=21% Similarity=0.307 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEecccccccCC----cCcee-----eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEP----LRRQY-----DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp----~~G~~-----df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+.|.-+|++|+|+|.+-=.+...+. .+--| .|....++.++++.|+++||+|||-.
T Consensus 7 ~~kLdyl~~lGv~~I~l~Pi~~~~~~~~gY~~~d~~~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~ 72 (316)
T PF00128_consen 7 IDKLDYLKDLGVNAIWLSPIFESPNGYHGYDPSDYYAVDPRFGTMEDFKELVDAAHKRGIKVILDV 72 (316)
T ss_dssp HHTHHHHHHHTESEEEESS-EESSSSTTTTSESEEEEESTTTBHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHhhHHHHHcCCCceecccccccccccccccceeeeccccccchhhhhhhhhhccccccceEEEee
Confidence 36788999999999998644442211 11111 14456899999999999999999886
No 63
>PF01229 Glyco_hydro_39: Glycosyl hydrolases family 39; InterPro: IPR000514 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 39 GH39 from CAZY comprises enzymes with several known activities; alpha-L-iduronidase (3.2.1.76 from EC); beta-xylosidase (3.2.1.37 from EC). The most highly conserved regions in these enzymes are located in their N-terminal sections. These contain a glutamic acid residue which, on the basis of similarities with other families of glycosyl hydrolases [], probably acts as the proton donor in their catalytic mechanism.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BS9_D 2BFG_E 1W91_B 1UHV_D 1PX8_A.
Probab=84.11 E-value=3.9 Score=47.92 Aligned_cols=142 Identities=18% Similarity=0.188 Sum_probs=72.0
Q ss_pred EEeeCCCCCCCChHHHHHHHH-HcCCCEEEec-cc---cccc-C-CcCc--eeeccCchHHHHHHHHHHHcCcEEEEecC
Q 036343 48 GSIHYPRSTPGMWPDLIKKAK-EGGLDAIETY-VF---WNAH-E-PLRR--QYDFTGNLDLIRFIKTIQDQGLYVILRIG 118 (795)
Q Consensus 48 G~~hy~r~~~~~W~~~l~k~k-a~G~N~V~~y-v~---Wn~h-E-p~~G--~~df~g~~dl~~fl~~a~~~gL~vilrpG 118 (795)
|+-|.....++.|+..|+.++ +.||..|++- +| .... | ..+| .|||+ .||.++|...+.||+-.+..|
T Consensus 29 ~~g~a~~~l~~~~q~~l~~~~~~~gf~yvR~h~l~~ddm~~~~~~~~~~~~~Ynf~---~lD~i~D~l~~~g~~P~vel~ 105 (486)
T PF01229_consen 29 GSGRANLLLRADWQEQLRELQEELGFRYVRFHGLFSDDMMVYSESDEDGIPPYNFT---YLDQILDFLLENGLKPFVELG 105 (486)
T ss_dssp EES-GGGGGBHHHHHHHHHHHCCS--SEEEES-TTSTTTT-EEEEETTEEEEE--H---HHHHHHHHHHHCT-EEEEEE-
T ss_pred CCCchHHHhhHHHHHHHHHHHhccCceEEEEEeeccCchhhccccccCCCCcCChH---HHHHHHHHHHHcCCEEEEEEE
Confidence 444444456788999998887 7799999874 33 1111 1 1233 39999 999999999999999877765
Q ss_pred ceeeeeeCCCCcccccccCCCccccc--------CCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccc
Q 036343 119 PYVCAEWNYGGFPVWLHNMPGIEELR--------TTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNV 190 (795)
Q Consensus 119 PyicaEw~~GG~P~WL~~~p~~~~~R--------~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~ 190 (795)
- .|.++...+... +. .+...|.+.++++++++..++..... . . =-+.|=||....
T Consensus 106 f----------~p~~~~~~~~~~-~~~~~~~~pp~~~~~W~~lv~~~~~h~~~RYG~~ev--~-~---W~fEiWNEPd~~ 168 (486)
T PF01229_consen 106 F----------MPMALASGYQTV-FWYKGNISPPKDYEKWRDLVRAFARHYIDRYGIEEV--S-T---WYFEIWNEPDLK 168 (486)
T ss_dssp S----------B-GGGBSS--EE-TTTTEE-S-BS-HHHHHHHHHHHHHHHHHHHHHHHH--T-T---SEEEESS-TTST
T ss_pred e----------chhhhcCCCCcc-ccccCCcCCcccHHHHHHHHHHHHHHHHhhcCCccc--c-c---eeEEeCcCCCcc
Confidence 1 466665432221 22 12234555555555555554432111 0 0 145788997642
Q ss_pred cccCCcccHHHHHHHHHHh
Q 036343 191 MSDYGDAGKSYINWCAKMA 209 (795)
Q Consensus 191 ~~~~~~~~~~y~~~l~~~~ 209 (795)
.........+|.+.-+..+
T Consensus 169 ~f~~~~~~~ey~~ly~~~~ 187 (486)
T PF01229_consen 169 DFWWDGTPEEYFELYDATA 187 (486)
T ss_dssp TTSGGG-HHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHH
Confidence 1111112345665444443
No 64
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=82.96 E-value=3.6 Score=41.16 Aligned_cols=124 Identities=17% Similarity=0.191 Sum_probs=73.6
Q ss_pred HHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccc
Q 036343 64 IKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEEL 143 (795)
Q Consensus 64 l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~ 143 (795)
|+.++++|+..|+....+....... ..+++++.++++++||.+..--.+.. + ..+... .
T Consensus 1 l~~~~~~G~~~vE~~~~~~~~~~~~-------~~~~~~~~~~~~~~gl~i~~~~~~~~---~----------~~~~~~-~ 59 (213)
T PF01261_consen 1 LEAAAEAGFDGVELRFDDGQPWDEK-------DDEAEELRRLLEDYGLKIASLHPPTN---F----------WSPDEE-N 59 (213)
T ss_dssp HHHHHHTTHSEEEEEHHHHSHHTHH-------HHHHHHHHHHHHHTTCEEEEEEEEES---S----------SCTGTT-S
T ss_pred ChHHHHcCCCEEEEecCCCcccccc-------hHHHHHHHHHHHHcCCeEEEEecccc---c----------cccccc-c
Confidence 6789999999999987644333322 34799999999999999653321100 0 011111 2
Q ss_pred cCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecc--cccccc--cccCCcccHHHHHHHHHHhhcCCCcc
Q 036343 144 RTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIE--NEYGNV--MSDYGDAGKSYINWCAKMATSLDIGV 216 (795)
Q Consensus 144 R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiE--NEyg~~--~~~~~~~~~~y~~~l~~~~~~~g~~v 216 (795)
++..++ ++...+.+.+.++..+ .+ |.+.|.+..= +..... ...+ ..-.+.++.|.+.+++.|+.+
T Consensus 60 ~~~~~~-r~~~~~~~~~~i~~a~--~l----g~~~i~~~~g~~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv~i 128 (213)
T PF01261_consen 60 GSANDE-REEALEYLKKAIDLAK--RL----GAKYIVVHSGRYPSGPEDDTEENW-ERLAENLRELAEIAEEYGVRI 128 (213)
T ss_dssp TTSSSH-HHHHHHHHHHHHHHHH--HH----TBSEEEEECTTESSSTTSSHHHHH-HHHHHHHHHHHHHHHHHTSEE
T ss_pred cCcchh-hHHHHHHHHHHHHHHH--Hh----CCCceeecCcccccccCCCHHHHH-HHHHHHHHHHHhhhhhhcceE
Confidence 444444 7777778888888877 33 5677777743 111110 0000 122356777777777777653
No 65
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=82.40 E-value=3.3 Score=53.60 Aligned_cols=113 Identities=17% Similarity=0.291 Sum_probs=69.3
Q ss_pred ceEEECCeEEEEEEE---EeeCCCC--CCCChHHHHHHHHHcCCCEEEe-ccc-ccc-cC--CcCceee----c----cC
Q 036343 34 RAITIDGERKILLSG---SIHYPRS--TPGMWPDLIKKAKEGGLDAIET-YVF-WNA-HE--PLRRQYD----F----TG 95 (795)
Q Consensus 34 ~~~~idG~p~~~~sG---~~hy~r~--~~~~W~~~l~k~ka~G~N~V~~-yv~-Wn~-hE--p~~G~~d----f----~g 95 (795)
-.+.|+|++++.+.+ +-...++ +-+.|++.|+.+|++|.|+|-. +|+ =.. .. ....++. | .+
T Consensus 103 P~L~i~~~~~lPl~~i~iqTvlsK~mG~~~~w~~~L~~ik~lGyN~IhftPI~~~G~SnS~Ysi~Dyl~idP~~~~~~~~ 182 (1464)
T TIGR01531 103 PMLYINADKFLPLDSIALQTVLAKLLGPLSEWEPRLRVAKEKGYNMIHFTPLQELGGSNSCYSLYDQLQLNQHFKSQKDG 182 (1464)
T ss_pred CeeEECCCcccCcCceeeeeehhhhcCCHHHHHHHHHHHHHcCCCEEEeCCCccCCCCCCCccccchhhcChhhcccCCc
Confidence 346666633333322 3345553 4477999999999999999976 444 110 00 0112221 3 36
Q ss_pred chHHHHHHHHHHHc-CcEEEEecCceeeeeeCCCC-cccccccCCCcccccCCChhHHHH
Q 036343 96 NLDLIRFIKTIQDQ-GLYVILRIGPYVCAEWNYGG-FPVWLHNMPGIEELRTTNKVFMNE 153 (795)
Q Consensus 96 ~~dl~~fl~~a~~~-gL~vilrpGPyicaEw~~GG-~P~WL~~~p~~~~~R~~d~~y~~~ 153 (795)
..|+.++++.|++. ||++|+..= |+-=+ -=.||..+|+.. .-..+.+||++
T Consensus 183 ~~d~~~lV~~~h~~~Gm~~ilDvV------~NHTa~ds~Wl~eHPEa~-Yn~~~sP~L~~ 235 (1464)
T TIGR01531 183 KNDVQALVEKLHRDWNVLSITDIV------FNHTANNSPWLLEHPEAA-YNCITSPHLRP 235 (1464)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEee------ecccccCCHHHHhChHhh-cCCCCCchhhh
Confidence 67999999999986 999998841 11111 135888888765 55656666543
No 66
>PRK01060 endonuclease IV; Provisional
Probab=82.16 E-value=28 Score=37.23 Aligned_cols=93 Identities=17% Similarity=0.323 Sum_probs=61.5
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE---EEecCceeeeeeCCCCccccccc
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV---ILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v---ilrpGPyicaEw~~GG~P~WL~~ 136 (795)
+++.+++++++|++.|++.+. +-+.-..+.++-+ +++++-++++++||.+ .+ -+||. +
T Consensus 14 ~~~~l~~~~~~G~d~vEl~~~-~p~~~~~~~~~~~---~~~~lk~~~~~~gl~~~~~~~-h~~~~------------~-- 74 (281)
T PRK01060 14 LEGAVAEAAEIGANAFMIFTG-NPQQWKRKPLEEL---NIEAFKAACEKYGISPEDILV-HAPYL------------I-- 74 (281)
T ss_pred HHHHHHHHHHcCCCEEEEECC-CCCCCcCCCCCHH---HHHHHHHHHHHcCCCCCceEE-ecceE------------e--
Confidence 889999999999999999653 1122222233333 7888999999999973 32 23331 1
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEee
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQ 182 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Q 182 (795)
. +-+.|+..+++..+.+++.++..+ .+ |.++|-+.
T Consensus 75 ----n-l~~~d~~~r~~s~~~~~~~i~~A~--~l----ga~~vv~h 109 (281)
T PRK01060 75 ----N-LGNPNKEILEKSRDFLIQEIERCA--AL----GAKLLVFH 109 (281)
T ss_pred ----c-CCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCEEEEc
Confidence 1 345677788887788888877766 33 45555554
No 67
>cd00019 AP2Ec AP endonuclease family 2; These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites; the alignment also contains hexulose-6-phosphate isomerases, enzymes that catalyze the epimerization of D-arabino-6-hexulose 3-phosphate to D-fructose 6-phosphate, via cleaving the phosphoesterbond with the sugar.
Probab=81.46 E-value=17 Score=38.97 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=39.7
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHc-CcEEEEe
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQ-GLYVILR 116 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~-gL~vilr 116 (795)
..|++.|+.+|++|++.|++-+....... .......+++++.++++++ ++.+.+-
T Consensus 10 ~~l~~~l~~a~~~G~d~vEl~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~i~~~ 65 (279)
T cd00019 10 FGLENALKRAKEIGFDTVAMFLGNPRSWL----SRPLKKERAEKFKAIAEEGPSICLSVH 65 (279)
T ss_pred ccHHHHHHHHHHcCCCEEEEEcCCCCccC----CCCCCHHHHHHHHHHHHHcCCCcEEEE
Confidence 67999999999999999999875321111 1111346899999999999 7666543
No 68
>COG1649 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=80.16 E-value=5.7 Score=45.60 Aligned_cols=123 Identities=20% Similarity=0.220 Sum_probs=80.1
Q ss_pred CCCChHHHHHHHHHcCCCEEEecc-------------cccccCCcCceee-ccCchHHHHHHHHHHHcCcEEEEecCcee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYV-------------FWNAHEPLRRQYD-FTGNLDLIRFIKTIQDQGLYVILRIGPYV 121 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv-------------~Wn~hEp~~G~~d-f~g~~dl~~fl~~a~~~gL~vilrpGPyi 121 (795)
.+.+-.+.|.+++++|+|||-.=| +|..-- ||++- =.|..-|...|++|++.||.|+.+.=||.
T Consensus 62 ~~~el~~~ld~l~~ln~NTv~~qV~~~G~~lypS~~~p~s~~~--~~~~~~~~g~DpLa~~I~~AHkr~l~v~aWf~~~~ 139 (418)
T COG1649 62 QRQELKDILDDLQKLNFNTVYPQVWNDGDALYPSAVLPWSDGL--PGVLGVDPGYDPLAFVIAEAHKRGLEVHAWFNPYR 139 (418)
T ss_pred cHHHHHHHHHHHHHcCCceeEEEEecCccccccccccccccCc--CcccCCCCCCChHHHHHHHHHhcCCeeeechhhcc
Confidence 566667999999999999985433 243332 45432 22444788889999999999999998887
Q ss_pred eeeeCCCC---ccccccc-CCCcccccCCC-------hhHHHHHHHHHHHHHH-HHHhccccccCCCcEEEeecccccc
Q 036343 122 CAEWNYGG---FPVWLHN-MPGIEELRTTN-------KVFMNEMQNFTTLIVD-MAKKEKLFASQGGPIILAQIENEYG 188 (795)
Q Consensus 122 caEw~~GG---~P~WL~~-~p~~~~~R~~d-------~~y~~~~~~~~~~l~~-~~~~~~~~~~~gGpII~~QiENEyg 188 (795)
-|--..-. -|.|+.. .|+..-.|... .++.-+|+.|+..+.. +++++ .|=++|++--++
T Consensus 140 ~a~~~s~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ldPg~Pevq~~i~~lv~evV~~Y--------dvDGIQfDd~fy 210 (418)
T COG1649 140 MAPPTSPLTKRHPHWLTTKRPGWVYVRHQGWGKRVWLDPGIPEVQDFITSLVVEVVRNY--------DVDGIQFDDYFY 210 (418)
T ss_pred cCCCCChhHhhCCCCcccCCCCeEEEecCCceeeeEeCCCChHHHHHHHHHHHHHHhCC--------CCCceecceeec
Confidence 66422222 3777775 35544134442 2345677777766554 55533 467889876665
No 69
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=80.04 E-value=3.1 Score=49.57 Aligned_cols=53 Identities=28% Similarity=0.439 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEe-ccc-------cccc-----CCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 62 DLIKKAKEGGLDAIET-YVF-------WNAH-----EPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~-------Wn~h-----Ep~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
++|.-+|++|+|+|.+ +|+ |... .+.+ .|.+..+|.+|++.|+++||.|||..
T Consensus 115 ~~l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~~~~~~~---~~G~~~e~k~lV~~aH~~Gi~VilD~ 180 (542)
T TIGR02402 115 EKLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHN---AYGGPDDLKALVDAAHGLGLGVILDV 180 (542)
T ss_pred HhhHHHHHcCCCEEEeCccccCCCCCCCCCCccCcccccc---ccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 4688999999999988 353 3211 1111 35566899999999999999999985
No 70
>KOG2230 consensus Predicted beta-mannosidase [Carbohydrate transport and metabolism]
Probab=79.72 E-value=11 Score=44.57 Aligned_cols=149 Identities=19% Similarity=0.244 Sum_probs=92.2
Q ss_pred ceEEECCeEEEEEEEEeeCC-----CCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHH
Q 036343 34 RAITIDGERKILLSGSIHYP-----RSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQD 108 (795)
Q Consensus 34 ~~~~idG~p~~~~sG~~hy~-----r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~ 108 (795)
-.|.|+|.|.++-++.--+. |..-+.-+-.|+.++++|+|++++. . .|...-+.|-++|.+
T Consensus 328 fyfkin~~pvflkg~nwip~s~f~dr~t~~~~~~LL~Sv~e~~MN~lRVW---G-----------GGvYEsd~FY~lad~ 393 (867)
T KOG2230|consen 328 FYFKINDEPVFLKGTNWIPVSMFRDRENIAKTEFLLDSVAEVGMNMLRVW---G-----------GGVYESDYFYQLADS 393 (867)
T ss_pred eEEEEcCcEEEeecCCccChHHHHhhHHHHHHHHHHHHHHHhCcceEEEe---c-----------CccccchhHHHHhhh
Confidence 46889999999887764432 2233444567999999999999983 2 133456789999999
Q ss_pred cCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeec--ccc
Q 036343 109 QGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQI--ENE 186 (795)
Q Consensus 109 ~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Qi--ENE 186 (795)
.||.|--.. =+.|| +=..|..|++.|+.=.+.=+.+|+.|| .||.+-= |||
T Consensus 394 lGilVWQD~-MFACA-------------------lYPt~~eFl~sv~eEV~yn~~Rls~Hp-------SviIfsgNNENE 446 (867)
T KOG2230|consen 394 LGILVWQDM-MFACA-------------------LYPTNDEFLSSVREEVRYNAMRLSHHP-------SVIIFSGNNENE 446 (867)
T ss_pred ccceehhhh-HHHhh-------------------cccCcHHHHHHHHHHHHHHHHhhccCC-------eEEEEeCCCccH
Confidence 999663221 01222 234577899988888887788888665 4665544 455
Q ss_pred cccccccCCc-------ccHHHH----HHHHHHhhcCCCccceeeeCC
Q 036343 187 YGNVMSDYGD-------AGKSYI----NWCAKMATSLDIGVPWIMCQE 223 (795)
Q Consensus 187 yg~~~~~~~~-------~~~~y~----~~l~~~~~~~g~~vp~~~~~~ 223 (795)
-.-....|+. .-++|. +-++++.....-..|++++..
T Consensus 447 aAl~~nWy~~sf~~~~~~~kdyvlly~~~i~el~l~~~~srPfi~SSP 494 (867)
T KOG2230|consen 447 AALVQNWYGTSFERDRFESKDYVLLYANVIHELKLVSHSSRPFIVSSP 494 (867)
T ss_pred HHHHhhhhcccccccchhhhhhhHHHHHHHHHHHhhcCCCCCceecCC
Confidence 2211112221 223333 335555555455678777643
No 71
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=79.61 E-value=2.6 Score=47.52 Aligned_cols=71 Identities=28% Similarity=0.287 Sum_probs=46.9
Q ss_pred EEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceee
Q 036343 46 LSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 46 ~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyic 122 (795)
++=++.+...+.+.....|++|+++|+..| |=++|.|+...=+.- ..+..++++|+++||.|++...|=+.
T Consensus 2 lGiSvY~~~~~~~~~~~yi~~a~~~Gf~~i----FTSL~ipe~~~~~~~--~~~~~l~~~a~~~~~~v~~Disp~~l 72 (357)
T PF05913_consen 2 LGISVYPGQSSFEENKAYIEKAAKYGFKRI----FTSLHIPEDDPEDYL--ERLKELLKLAKELGMEVIADISPKVL 72 (357)
T ss_dssp EEEEE-CCCS-HHHHHHHHHHHHCTTEEEE----EEEE---------HH--HHHHHHHHHHHHCT-EEEEEE-CCHH
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHCCCCEE----ECCCCcCCCCHHHHH--HHHHHHHHHHHHCCCEEEEECCHHHH
Confidence 455677777778889999999999999765 557899985432222 37999999999999999999877553
No 72
>PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=79.20 E-value=17 Score=38.92 Aligned_cols=126 Identities=17% Similarity=0.282 Sum_probs=73.8
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEE-EecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVI-LRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vi-lrpGPyicaEw~~GG~P~WL~~ 136 (795)
-.|++.++.++++|+..|+..+. ..++ ....++++ ..+++++.++++++||.|. +.++.. ..++
T Consensus 21 ~~~~e~~~~~~~~G~~~iEl~~~-~~~~-~~~~~~~~-~~~~~~l~~~l~~~gl~i~~~~~~~~-------~~~~----- 85 (283)
T PRK13209 21 ECWLEKLAIAKTAGFDFVEMSVD-ESDE-RLARLDWS-REQRLALVNALVETGFRVNSMCLSAH-------RRFP----- 85 (283)
T ss_pred CCHHHHHHHHHHcCCCeEEEecC-cccc-chhccCCC-HHHHHHHHHHHHHcCCceeEEecccc-------cccC-----
Confidence 36999999999999999999642 1111 01122333 2468899999999999875 332210 0000
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcc-------cHHHHHHHHHHh
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDA-------GKSYINWCAKMA 209 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~-------~~~y~~~l~~~~ 209 (795)
+-+.++.-++...+.+++.++..+ .+ |.++|-+. |.. ..++.. -.+.++.|.+++
T Consensus 86 ------~~~~~~~~r~~~~~~~~~~i~~a~--~l----G~~~i~~~-----~~~-~~~~~~~~~~~~~~~~~l~~l~~~A 147 (283)
T PRK13209 86 ------LGSEDDAVRAQALEIMRKAIQLAQ--DL----GIRVIQLA-----GYD-VYYEQANNETRRRFIDGLKESVELA 147 (283)
T ss_pred ------CCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCEEEEC-----Ccc-ccccccHHHHHHHHHHHHHHHHHHH
Confidence 223455566666677777777776 33 56766542 110 001111 134567777777
Q ss_pred hcCCCcc
Q 036343 210 TSLDIGV 216 (795)
Q Consensus 210 ~~~g~~v 216 (795)
++.|+.+
T Consensus 148 ~~~GV~i 154 (283)
T PRK13209 148 SRASVTL 154 (283)
T ss_pred HHhCCEE
Confidence 7777653
No 73
>TIGR02631 xylA_Arthro xylose isomerase, Arthrobacter type. This model describes a D-xylose isomerase that is also active as a D-glucose isomerase. It is tetrameric and dependent on a divalent cation Mg2+, Co2+ or Mn2+ as characterized in Arthrobacter. Members of this family differ substantially from the D-xylose isomerases of family TIGR02630.
Probab=78.60 E-value=37 Score=38.73 Aligned_cols=91 Identities=18% Similarity=0.188 Sum_probs=54.1
Q ss_pred CCCChHHHHHHHHHcCCCEEEec----ccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE-ecCceeeeeeCCCCc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETY----VFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL-RIGPYVCAEWNYGGF 130 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~y----v~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil-rpGPyicaEw~~GG~ 130 (795)
++....+++++++++|+..|+.. ++|..-+.+. ..+++++-++++++||.|.. -++-+. -
T Consensus 30 ~~~~~~e~i~~la~~GfdgVE~~~~dl~P~~~~~~e~-------~~~~~~lk~~L~~~GL~v~~v~~nl~~--------~ 94 (382)
T TIGR02631 30 TALDPVEAVHKLAELGAYGVTFHDDDLIPFGAPPQER-------DQIVRRFKKALDETGLKVPMVTTNLFS--------H 94 (382)
T ss_pred CCcCHHHHHHHHHHhCCCEEEecccccCCCCCChhHH-------HHHHHHHHHHHHHhCCeEEEeeccccC--------C
Confidence 34566799999999999999964 2221111100 23578899999999999753 332110 1
Q ss_pred ccccccCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 131 PVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 131 P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
|.|.. -+ +=+.|+..+++.-+.+++.++.-+
T Consensus 95 ~~~~~--g~---las~d~~vR~~ai~~~kraId~A~ 125 (382)
T TIGR02631 95 PVFKD--GG---FTSNDRSVRRYALRKVLRNMDLGA 125 (382)
T ss_pred ccccC--CC---CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 22211 11 345577777665565666666655
No 74
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=78.13 E-value=33 Score=36.11 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
-.+++.+++++++|++.|+...++ ..+++.+.++++++||.|..
T Consensus 14 ~~l~e~~~~~~e~G~~~vEl~~~~--------------~~~~~~l~~~l~~~gl~v~~ 57 (254)
T TIGR03234 14 LPFLERFAAAAQAGFTGVEYLFPY--------------DWDAEALKARLAAAGLEQVL 57 (254)
T ss_pred CCHHHHHHHHHHcCCCEEEecCCc--------------cCCHHHHHHHHHHcCCeEEE
Confidence 358999999999999999985432 12588889999999999864
No 75
>PF14587 Glyco_hydr_30_2: O-Glycosyl hydrolase family 30; PDB: 3CLW_B.
Probab=76.99 E-value=19 Score=41.06 Aligned_cols=123 Identities=13% Similarity=0.171 Sum_probs=68.9
Q ss_pred CcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcc---cccCC-ChhHHHHHHHHHHHH
Q 036343 86 PLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIE---ELRTT-NKVFMNEMQNFTTLI 161 (795)
Q Consensus 86 p~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~---~~R~~-d~~y~~~~~~~~~~l 161 (795)
+..|.|||+.+..=..|++.|++.|...++-+ .-..|.|+.+.-... ....+ .+...++-..|+..+
T Consensus 93 ~~dg~yDW~~D~gQrwfL~~Ak~rGV~~f~aF---------SNSPP~~MT~NG~~~g~~~~~~NLk~d~y~~FA~YLa~V 163 (384)
T PF14587_consen 93 PADGSYDWDADAGQRWFLKAAKERGVNIFEAF---------SNSPPWWMTKNGSASGGDDGSDNLKPDNYDAFADYLADV 163 (384)
T ss_dssp -TTS-B-TTSSHHHHHHHHHHHHTT---EEEE----------SSS-GGGSSSSSSB-S-SSS-SS-TT-HHHHHHHHHHH
T ss_pred CCCCCcCCCCCHHHHHHHHHHHHcCCCeEEEe---------ecCCCHHHhcCCCCCCCCccccccChhHHHHHHHHHHHH
Confidence 56799999987777789999999999988765 236899997632110 01011 255677777888888
Q ss_pred HHHHHhccccccCCCcEEEeecccccccc-------cccCC-cccHHHHHHHHHHhhcCCCccceeeeCC
Q 036343 162 VDMAKKEKLFASQGGPIILAQIENEYGNV-------MSDYG-DAGKSYINWCAKMATSLDIGVPWIMCQE 223 (795)
Q Consensus 162 ~~~~~~~~~~~~~gGpII~~QiENEyg~~-------~~~~~-~~~~~y~~~l~~~~~~~g~~vp~~~~~~ 223 (795)
+++++.+.+ +|=-+=-=||.... ++.+. +...+.++.|...+++.|+..-+..|+.
T Consensus 164 v~~~~~~GI------~f~~IsP~NEP~~~W~~~~QEG~~~~~~e~a~vI~~L~~~L~~~GL~t~I~~~Ea 227 (384)
T PF14587_consen 164 VKHYKKWGI------NFDYISPFNEPQWNWAGGSQEGCHFTNEEQADVIRALDKALKKRGLSTKISACEA 227 (384)
T ss_dssp HHHHHCTT--------EEEEE--S-TTS-GG--SS-B----HHHHHHHHHHHHHHHHHHT-S-EEEEEEE
T ss_pred HHHHHhcCC------ccceeCCcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHhcCCCceEEecch
Confidence 888864332 34444444887532 11111 1346889999999999999877665543
No 76
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=76.36 E-value=29 Score=36.95 Aligned_cols=130 Identities=16% Similarity=0.138 Sum_probs=69.8
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE-ecCceeeeeeCCCCccccccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL-RIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil-rpGPyicaEw~~GG~P~WL~~ 136 (795)
..|++.|+.++++|++.|++.... .|+-.+ +++ ..+++++-++++++||.|.. .++ .+++|..+.
T Consensus 13 ~~l~~~l~~~~~~G~~~vEl~~~~-~~~~~~---~~~-~~~~~~l~~~~~~~gl~v~s~~~~--------~~~~~~~~~- 78 (275)
T PRK09856 13 LPIEHAFRDASELGYDGIEIWGGR-PHAFAP---DLK-AGGIKQIKALAQTYQMPIIGYTPE--------TNGYPYNMM- 78 (275)
T ss_pred CCHHHHHHHHHHcCCCEEEEccCC-cccccc---ccC-chHHHHHHHHHHHcCCeEEEecCc--------ccCcCcccc-
Confidence 358999999999999999984211 011011 122 24788999999999999753 221 123433321
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccc-cc-cccccCCcccHHHHHHHHHHhhcCCC
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENE-YG-NVMSDYGDAGKSYINWCAKMATSLDI 214 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENE-yg-~~~~~~~~~~~~y~~~l~~~~~~~g~ 214 (795)
..++.-+++..+.+++.++.-+ .+ |.+.|.+-.-.. +. .....+ ..-.+.++.|.+.+++.|+
T Consensus 79 --------~~~~~~r~~~~~~~~~~i~~a~--~l----Ga~~i~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~gv 143 (275)
T PRK09856 79 --------LGDEHMRRESLDMIKLAMDMAK--EM----NAGYTLISAAHAGYLTPPNVIW-GRLAENLSELCEYAENIGM 143 (275)
T ss_pred --------CCCHHHHHHHHHHHHHHHHHHH--Hh----CCCEEEEcCCCCCCCCCHHHHH-HHHHHHHHHHHHHHHHcCC
Confidence 2234444555555555555555 22 455554421110 00 000000 0123467777778887776
Q ss_pred cc
Q 036343 215 GV 216 (795)
Q Consensus 215 ~v 216 (795)
.+
T Consensus 144 ~l 145 (275)
T PRK09856 144 DL 145 (275)
T ss_pred EE
Confidence 43
No 77
>PRK12313 glycogen branching enzyme; Provisional
Probab=75.25 E-value=5.4 Score=48.39 Aligned_cols=54 Identities=20% Similarity=0.357 Sum_probs=38.2
Q ss_pred HHHHHHcCCCEEEe-ccc-------ccccCC--cCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 64 IKKAKEGGLDAIET-YVF-------WNAHEP--LRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 64 l~k~ka~G~N~V~~-yv~-------Wn~hEp--~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
|.-+|++|+|+|.. +|+ |...-- ..=.-.|.+..||.+||+.|+++||.|||..
T Consensus 177 l~yl~~LGv~~i~L~Pi~~~~~~~~~GY~~~~y~~i~~~~Gt~~d~k~lv~~~H~~Gi~VilD~ 240 (633)
T PRK12313 177 IPYVKEMGYTHVEFMPLMEHPLDGSWGYQLTGYFAPTSRYGTPEDFMYLVDALHQNGIGVILDW 240 (633)
T ss_pred HHHHHHcCCCEEEeCchhcCCCCCCCCCCCcCcCcCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 58899999999996 453 211000 0001135667899999999999999999985
No 78
>PF13200 DUF4015: Putative glycosyl hydrolase domain
Probab=74.95 E-value=10 Score=42.23 Aligned_cols=111 Identities=23% Similarity=0.332 Sum_probs=70.2
Q ss_pred CCChHHHHHHHHHcCCCEEEecc-------cccccCCcCceeecc-C-chHHHHHHHHHHHcCcEEEEecCceeeeeeCC
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYV-------FWNAHEPLRRQYDFT-G-NLDLIRFIKTIQDQGLYVILRIGPYVCAEWNY 127 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv-------~Wn~hEp~~G~~df~-g-~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~ 127 (795)
++.-+..|+.+++.|+|+|-+-| .+..-.|..-+..-. . ..|+.++++.++++|||+|.|.=-+---.- .
T Consensus 12 ~~~~~~~~~~i~~t~lNavVIDvKdd~G~i~y~s~~~~~~~~ga~~~~i~D~~~l~~~l~e~gIY~IARIv~FkD~~l-a 90 (316)
T PF13200_consen 12 PERLDKLLDLIKRTELNAVVIDVKDDDGNITYDSQVPLAREIGAVKPYIKDLKALVKKLKEHGIYPIARIVVFKDPVL-A 90 (316)
T ss_pred HHHHHHHHHHHHhcCCceEEEEEecCCceEEecCCCchhhhcccccccccCHHHHHHHHHHCCCEEEEEEEEecChHH-h
Confidence 34567889999999999987644 454444433332211 1 369999999999999999999721110000 0
Q ss_pred CCcccccccCC-CcccccCCC-----hhHHHHHHHHHHHHHHHHHhcc
Q 036343 128 GGFPVWLHNMP-GIEELRTTN-----KVFMNEMQNFTTLIVDMAKKEK 169 (795)
Q Consensus 128 GG~P~WL~~~p-~~~~~R~~d-----~~y~~~~~~~~~~l~~~~~~~~ 169 (795)
.--|.|-.+.. +-. .|..+ .+|.+++.+|.-.|++.+++..
T Consensus 91 ~~~pe~av~~~~G~~-w~d~~~~~WvnP~~~evw~Y~i~IA~Eaa~~G 137 (316)
T PF13200_consen 91 EAHPEWAVKTKDGSV-WRDNEGEAWVNPYSKEVWDYNIDIAKEAAKLG 137 (316)
T ss_pred hhChhhEEECCCCCc-ccCCCCCccCCCCCHHHHHHHHHHHHHHHHcC
Confidence 01466665321 211 33222 4578899999999999988543
No 79
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=74.66 E-value=6.2 Score=48.66 Aligned_cols=59 Identities=19% Similarity=0.243 Sum_probs=42.7
Q ss_pred ChHHHHHHHHHcCCCEEEec-cc-------ccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 59 MWPDLIKKAKEGGLDAIETY-VF-------WNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~y-v~-------Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.|++.|..+|++|+|+|++- |+ |..+-.. .=.-.|....+|.+||+.|+++||.|||..
T Consensus 252 ~~~~~L~ylk~LG~t~I~LmPi~e~~~~~~wGY~~~~~fa~~~~~Gtp~dlk~LVd~aH~~GI~VilDv 320 (758)
T PLN02447 252 FADDVLPRIKALGYNAVQLMAIQEHAYYGSFGYHVTNFFAVSSRSGTPEDLKYLIDKAHSLGLRVLMDV 320 (758)
T ss_pred HHHHHHHHHHHcCCCEEEECCccccCCCCCCCcCcccCcccccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 37788999999999999873 32 3322100 001135566899999999999999999985
No 80
>PRK10785 maltodextrin glucosidase; Provisional
Probab=74.07 E-value=5.7 Score=47.91 Aligned_cols=57 Identities=21% Similarity=0.349 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCCEEEe-ccccc--ccCCcCcee-----eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIET-YVFWN--AHEPLRRQY-----DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~-yv~Wn--~hEp~~G~~-----df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+.|.-+|++|+|+|-+ +|+=+ .|---..-| .|.+..||.+|++.|++.||+|||..
T Consensus 182 ~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~ 246 (598)
T PRK10785 182 SEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDG 246 (598)
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 36788899999999987 56532 121111111 25566899999999999999999875
No 81
>PRK09997 hydroxypyruvate isomerase; Provisional
Probab=73.12 E-value=46 Score=35.25 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=34.6
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
++++|++++++|++.|++.. | + ..+++++.++++++||.+..
T Consensus 17 l~~~l~~~a~~Gf~~VEl~~------~----~----~~~~~~~~~~l~~~gl~~~~ 58 (258)
T PRK09997 17 FLARFEKAAQCGFRGVEFMF------P----Y----DYDIEELKQVLASNKLEHTL 58 (258)
T ss_pred HHHHHHHHHHhCCCEEEEcC------C----C----CCCHHHHHHHHHHcCCcEEE
Confidence 78899999999999999832 1 1 13799999999999999854
No 82
>PLN02960 alpha-amylase
Probab=72.89 E-value=7.1 Score=48.66 Aligned_cols=56 Identities=23% Similarity=0.273 Sum_probs=39.7
Q ss_pred HHHHHHHHcCCCEEEe-ccc-------ccccCCc--CceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 62 DLIKKAKEGGLDAIET-YVF-------WNAHEPL--RRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~-------Wn~hEp~--~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.|.-+|++|+|+|++ +|+ |...--. .=.-.|....+|.+||+.|+++||.|||..
T Consensus 421 ~~LdYLk~LGvt~IeLmPv~e~~~~~swGY~~~~yfa~~~~yGtp~dfk~LVd~aH~~GI~VILDv 486 (897)
T PLN02960 421 KVLPHVKKAGYNAIQLIGVQEHKDYSSVGYKVTNFFAVSSRFGTPDDFKRLVDEAHGLGLLVFLDI 486 (897)
T ss_pred HHHHHHHHcCCCEEEECCcccCCCCCCCCCCcccCCCcccccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4588999999999998 353 3221000 001124456799999999999999999985
No 83
>PF02065 Melibiase: Melibiase; InterPro: IPR000111 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycosyl hydrolase family 27, family 31 and family 36 alpha-galactosidases form the glycosyl hydrolase clan GH-D (acc_GH from CAZY), a superfamily of alpha-galactosidases, alpha-N-acetylgalactosaminidases, and isomaltodextranases which are likely to share a common catalytic mechanism and structural topology. Alpha-galactosidase (3.2.1.22 from EC) (melibiase) [] catalyzes the hydrolysis of melibiose into galactose and glucose. In man, the deficiency of this enzyme is the cause of Fabry's disease (X-linked sphingolipidosis). Alpha-galactosidase is present in a variety of organisms. There is a considerable degree of similarity in the sequence of alpha-galactosidase from various eukaryotic species. Escherichia coli alpha-galactosidase (gene melA), which requires NAD and magnesium as cofactors, is not structurally related to the eukaryotic enzymes; by contrast, an Escherichia coli plasmid encoded alpha-galactosidase (gene rafA P16551 from SWISSPROT) [] contains a region of about 50 amino acids which is similar to a domain of the eukaryotic alpha-galactosidases. Alpha-N-acetylgalactosaminidase (3.2.1.49 from EC) [] catalyzes the hydrolysis of terminal non-reducing N-acetyl-D-galactosamine residues in N-acetyl-alpha-D- galactosaminides. In man, the deficiency of this enzyme is the cause of Schindler and Kanzaki diseases. The sequence of this enzyme is highly related to that of the eukaryotic alpha-galactosidases.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1KTC_A 1KTB_A 1UAS_A 3H55_A 3H53_A 3IGU_B 3H54_A 3LRM_A 3LRL_A 3LRK_A ....
Probab=72.86 E-value=18 Score=41.50 Aligned_cols=89 Identities=19% Similarity=0.195 Sum_probs=58.6
Q ss_pred eCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcC----ceeeccCc---hHHHHHHHHHHHcCcEEEEecCceeee
Q 036343 51 HYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLR----RQYDFTGN---LDLIRFIKTIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 51 hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~----G~~df~g~---~dl~~fl~~a~~~gL~vilrpGPyica 123 (795)
+|+.+..+.-.+.+++++++|++.+.+---|....... |.|--+-. .-|..+++.+++.||+.=|+..|.+.+
T Consensus 51 ~~~d~~e~~i~~~a~~~~~~G~e~fviDDGW~~~r~~d~~~~GdW~~~~~kFP~Gl~~l~~~i~~~Gmk~GlW~ePe~v~ 130 (394)
T PF02065_consen 51 YYFDITEEKILELADAAAELGYEYFVIDDGWFGGRDDDNAGLGDWEPDPKKFPNGLKPLADYIHSLGMKFGLWFEPEMVS 130 (394)
T ss_dssp HTTG--HHHHHHHHHHHHHHT-SEEEE-SSSBCTESTTTSTTSBECBBTTTSTTHHHHHHHHHHHTT-EEEEEEETTEEE
T ss_pred cCcCCCHHHHHHHHHHHHHhCCEEEEEcCccccccCCCcccCCceeEChhhhCCcHHHHHHHHHHCCCeEEEEecccccc
Confidence 45666777777889999999999888888897653222 43322111 249999999999999999998887654
Q ss_pred eeC--CCCcccccccCCC
Q 036343 124 EWN--YGGFPVWLHNMPG 139 (795)
Q Consensus 124 Ew~--~GG~P~WL~~~p~ 139 (795)
+=. +-..|.|++..++
T Consensus 131 ~~S~l~~~hPdw~l~~~~ 148 (394)
T PF02065_consen 131 PDSDLYREHPDWVLRDPG 148 (394)
T ss_dssp SSSCHCCSSBGGBTCCTT
T ss_pred chhHHHHhCccceeecCC
Confidence 311 1237999987654
No 84
>PLN00196 alpha-amylase; Provisional
Probab=72.85 E-value=20 Score=41.54 Aligned_cols=57 Identities=16% Similarity=0.250 Sum_probs=40.8
Q ss_pred HHHHHHHHHcCCCEEEecccccc---cCCcCce-ee-----ccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNA---HEPLRRQ-YD-----FTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~---hEp~~G~-~d-----f~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+.|.-+|++|+++|-+.=+..- |--.+.. |+ |....+|.++++.|+++||+||+..
T Consensus 47 ~~kldyL~~LGvtaIWL~P~~~s~s~hGY~~~D~y~ld~~~fGt~~elk~Lv~~aH~~GIkVilDv 112 (428)
T PLN00196 47 MGKVDDIAAAGITHVWLPPPSHSVSEQGYMPGRLYDLDASKYGNEAQLKSLIEAFHGKGVQVIADI 112 (428)
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCccccCCCCcccCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 37788899999999988633222 2222221 22 4445799999999999999999986
No 85
>PRK09505 malS alpha-amylase; Reviewed
Probab=72.37 E-value=7 Score=47.81 Aligned_cols=58 Identities=10% Similarity=0.232 Sum_probs=43.0
Q ss_pred hHHHHHHHHHcCCCEEEe-cccccccCCc----Cc------------------eeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 60 WPDLIKKAKEGGLDAIET-YVFWNAHEPL----RR------------------QYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~-yv~Wn~hEp~----~G------------------~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
+.+.|.-+|++|+|+|-+ +++=+.|... .| .-.|....|++++++.|+++||+|||.
T Consensus 232 i~~kLdyl~~LGv~aIwlsPi~~~~~~~~~~g~~g~~~~~~yhgY~~~D~~~id~~~Gt~~dfk~Lv~~aH~~Gi~VilD 311 (683)
T PRK09505 232 LTEKLDYLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLVDEAHQRGIRILFD 311 (683)
T ss_pred HHHhhHHHHHcCCCEEEeCccccccccccccccccCCCcCCCCCCCccccccCCCCCCCHHHHHHHHHHHHHCCCEEEEE
Confidence 457888999999999986 4654444321 11 113556689999999999999999998
Q ss_pred c
Q 036343 117 I 117 (795)
Q Consensus 117 p 117 (795)
.
T Consensus 312 ~ 312 (683)
T PRK09505 312 V 312 (683)
T ss_pred E
Confidence 6
No 86
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=72.17 E-value=6.8 Score=47.25 Aligned_cols=52 Identities=25% Similarity=0.345 Sum_probs=39.8
Q ss_pred HHHHHHHHHcCCCEEEe-ccc-------ccccCCcCcee------eccCchHHHHHHHHHHHcCcEEEEe
Q 036343 61 PDLIKKAKEGGLDAIET-YVF-------WNAHEPLRRQY------DFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~-yv~-------Wn~hEp~~G~~------df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
.+.|.-+|+||+++|+. +|. |..- |+. .|..-.||.+|||.|+++||-|||.
T Consensus 168 ~~llpYl~elG~T~IELMPv~e~p~~~sWGYq----~~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD 233 (628)
T COG0296 168 IELLPYLKELGITHIELMPVAEHPGDRSWGYQ----GTGYYAPTSRYGTPEDFKALVDAAHQAGIGVILD 233 (628)
T ss_pred HHHhHHHHHhCCCEEEEcccccCCCCCCCCCC----cceeccccccCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 46788899999999998 343 4331 222 2444579999999999999999997
No 87
>PF14683 CBM-like: Polysaccharide lyase family 4, domain III; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A.
Probab=72.06 E-value=4.2 Score=41.02 Aligned_cols=61 Identities=28% Similarity=0.334 Sum_probs=28.3
Q ss_pred eeEEEEEcCeeecccccccccccCCCCCCCcCCCC-CCCCCcccCCCCCCceeEEecCcccccCCcceEEEEEeccC
Q 036343 615 GKGFAWVNGYNLGRYWPTYLAEEDGCSTESCDYRG-PYGSDKCAYNCGNPSQIWYHVPRSWIKDGVNTLVLFEEFGG 690 (795)
Q Consensus 615 gKG~vwVNG~nLGRYW~~~~~~~~Gc~~~~~~~G~-~~~~~~~~~~~~~PQqtlY~VP~~~Lk~g~N~IvvfEe~g~ 690 (795)
++=+|.||| ..+..+.... | .+.|.+|++ |+ |..+.--|-||+.+|++|.|+|.|=-..|.
T Consensus 93 ~~~~V~vNg-~~~~~~~~~~----~-~d~~~~r~g~~~---------G~~~~~~~~ipa~~L~~G~Nti~lt~~~gs 154 (167)
T PF14683_consen 93 GRLQVSVNG-WSGPFPSAPF----G-NDNAIYRSGIHR---------GNYRLYEFDIPASLLKAGENTITLTVPSGS 154 (167)
T ss_dssp -EEEEEETT-EE----------------S--GGGT------------S---EEEEEE-TTSS-SEEEEEEEEEE-S-
T ss_pred CCEEEEEcC-ccCCcccccc----C-CCCceeeCceec---------ccEEEEEEEEcHHHEEeccEEEEEEEccCC
Confidence 555899999 6776663111 1 234444443 32 445666677999999999999876544443
No 88
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=71.54 E-value=6.4 Score=46.87 Aligned_cols=56 Identities=16% Similarity=0.289 Sum_probs=41.4
Q ss_pred hHHHHHHHHHcCCCEEEec-ccccccCCcCceee----------ccCchHHHHHHHHHHHcCcEEEEec
Q 036343 60 WPDLIKKAKEGGLDAIETY-VFWNAHEPLRRQYD----------FTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~y-v~Wn~hEp~~G~~d----------f~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.++|.-+|++|+|+|-+- ++-+-.. ...|+ |....||.++++.|+++||+|||..
T Consensus 29 i~~~l~yl~~lG~~~i~l~Pi~~~~~~--~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~ 95 (543)
T TIGR02403 29 IIEKLDYLKKLGVDYIWLNPFYVSPQK--DNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDM 95 (543)
T ss_pred HHHhHHHHHHcCCCEEEECCcccCCCC--CCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 5678899999999999873 5432110 11232 4566899999999999999999875
No 89
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=70.82 E-value=8.4 Score=46.00 Aligned_cols=55 Identities=18% Similarity=0.299 Sum_probs=41.3
Q ss_pred hHHHHHHHHHcCCCEEEe-cccccccCCc-Ccee----------eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 60 WPDLIKKAKEGGLDAIET-YVFWNAHEPL-RRQY----------DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~-yv~Wn~hEp~-~G~~----------df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.++|.-+|++|+++|-+ +|+-. |. ..-| +|....||+++++.|+++||+|||..
T Consensus 35 i~~~ldyl~~lGv~~i~l~P~~~~---~~~~~gY~~~d~~~id~~~Gt~~d~~~lv~~~h~~gi~vilD~ 101 (551)
T PRK10933 35 VTQRLDYLQKLGVDAIWLTPFYVS---PQVDNGYDVANYTAIDPTYGTLDDFDELVAQAKSRGIRIILDM 101 (551)
T ss_pred HHHhhHHHHhCCCCEEEECCCCCC---CCCCCCCCcccCCCcCcccCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 457889999999999987 45422 21 1123 24556899999999999999999875
No 90
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=70.76 E-value=7.8 Score=46.78 Aligned_cols=55 Identities=24% Similarity=0.440 Sum_probs=37.5
Q ss_pred HHHHHHHHcCCCEEEe-ccc---------------ccccC-----CcCceee----cc--CchHHHHHHHHHHHcCcEEE
Q 036343 62 DLIKKAKEGGLDAIET-YVF---------------WNAHE-----PLRRQYD----FT--GNLDLIRFIKTIQDQGLYVI 114 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~---------------Wn~hE-----p~~G~~d----f~--g~~dl~~fl~~a~~~gL~vi 114 (795)
+.|.-+|++|+|+|++ +|+ |...- |+ +.|- |. ...+|.+|++.|+++||.||
T Consensus 168 ~~LdyL~~LGvt~I~L~Pi~~~~~~~~~~~~~~~~wGY~~~~y~~~~-~~y~~~p~~~~~~~~efk~lV~~~H~~Gi~Vi 246 (605)
T TIGR02104 168 TGLDYLKELGVTHVQLLPVFDFAGVDEEDPNNAYNWGYDPLNYNVPE-GSYSTNPYDPATRIRELKQMIQALHENGIRVI 246 (605)
T ss_pred hHHHHHHHcCCCEEEeCCcccccccccccCCCCCCCCCCCccCCCcC-hhhhcCCCccchHHHHHHHHHHHHHHCCCEEE
Confidence 4589999999999998 453 22210 00 0110 10 12689999999999999999
Q ss_pred Eec
Q 036343 115 LRI 117 (795)
Q Consensus 115 lrp 117 (795)
|..
T Consensus 247 lDv 249 (605)
T TIGR02104 247 MDV 249 (605)
T ss_pred EEE
Confidence 985
No 91
>PF03659 Glyco_hydro_71: Glycosyl hydrolase family 71 ; InterPro: IPR005197 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,3-glucanases belonging to glycoside hydrolase family 71 (GH71 from CAZY).
Probab=69.41 E-value=18 Score=41.33 Aligned_cols=53 Identities=15% Similarity=0.257 Sum_probs=42.9
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
..+.|+++++.+|++||+...+=+- ....+..+ .|...++.|++.|.++.|-+
T Consensus 15 t~~dw~~di~~A~~~GIDgFaLNig------~~d~~~~~---~l~~a~~AA~~~gFKlf~Sf 67 (386)
T PF03659_consen 15 TQEDWEADIRLAQAAGIDGFALNIG------SSDSWQPD---QLADAYQAAEAVGFKLFFSF 67 (386)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecc------cCCcccHH---HHHHHHHHHHhcCCEEEEEe
Confidence 7788999999999999998887664 22223333 78889999999999999986
No 92
>TIGR02456 treS_nterm trehalose synthase. Trehalose synthase interconverts maltose and alpha, alpha-trehalose by transglucosylation. This is one of at least three mechanisms for biosynthesis of trehalose, an important and widespread compatible solute. However, it is not driven by phosphate activation of sugars and its physiological role may tend toward trehalose degradation. This view is accentuated by numerous examples of fusion to a probable maltokinase domain. The sequence region described by this model is found both as the whole of a trehalose synthase and as the N-terminal region of a larger fusion protein that includes trehalose synthase activity. Several of these fused trehalose synthases have a domain homologous to proteins with maltokinase activity from Actinoplanes missouriensis and Streptomyces coelicolor (PubMed:15378530).
Probab=68.76 E-value=10 Score=45.16 Aligned_cols=56 Identities=25% Similarity=0.392 Sum_probs=41.2
Q ss_pred ChHHHHHHHHHcCCCEEEec-ccccccCCc-Ccee----------eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 59 MWPDLIKKAKEGGLDAIETY-VFWNAHEPL-RRQY----------DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~y-v~Wn~hEp~-~G~~----------df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
-+.+.|.-+|++|+|+|-+- |+ .. +. ...| .|....|+.++++.|+++||+|||..
T Consensus 29 gi~~~Ldyl~~LGv~~i~L~Pi~-~~--~~~~~gY~~~dy~~vd~~~Gt~~df~~Lv~~ah~~Gi~vilD~ 96 (539)
T TIGR02456 29 GLTSKLDYLKWLGVDALWLLPFF-QS--PLRDDGYDVSDYRAILPEFGTIDDFKDFVDEAHARGMRVIIDL 96 (539)
T ss_pred HHHHhHHHHHHCCCCEEEECCCc-CC--CCCCCCCCcccccccChhhCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 36678999999999999874 43 10 11 1122 24566899999999999999999963
No 93
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=67.24 E-value=47 Score=35.29 Aligned_cols=92 Identities=12% Similarity=0.211 Sum_probs=60.7
Q ss_pred hHHHHHHHHHcCCCEEEecccccccCCcCcee-eccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCC
Q 036343 60 WPDLIKKAKEGGLDAIETYVFWNAHEPLRRQY-DFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMP 138 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~-df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p 138 (795)
-.+.|+.+.++|++.|+... .+|..-.- +++ ..+++++.++++++||.+.+- +||. +
T Consensus 12 ~~~~~~~~~~~G~~~vel~~----~~~~~~~~~~~~-~~~~~~l~~~~~~~gl~ls~h-~p~~------------~---- 69 (273)
T smart00518 12 LYKAFIEAVDIGARSFQLFL----GNPRSWKGVRLS-EETAEKFKEALKENNIDVSVH-APYL------------I---- 69 (273)
T ss_pred HhHHHHHHHHcCCCEEEEEC----CCCCCCCCCCCC-HHHHHHHHHHHHHcCCCEEEE-CCce------------e----
Confidence 34789999999999999943 33322110 222 237899999999999986553 2331 1
Q ss_pred CcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEee
Q 036343 139 GIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQ 182 (795)
Q Consensus 139 ~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Q 182 (795)
. +.+.|+..+++..+++++.++..+ .+ |.++|.+.
T Consensus 70 --n-l~s~d~~~r~~~~~~l~~~i~~A~--~l----Ga~~vv~h 104 (273)
T smart00518 70 --N-LASPDKEKVEKSIERLIDEIKRCE--EL----GIKALVFH 104 (273)
T ss_pred --c-CCCCCHHHHHHHHHHHHHHHHHHH--Hc----CCCEEEEc
Confidence 1 456677788877788888888766 33 55666553
No 94
>PF06832 BiPBP_C: Penicillin-Binding Protein C-terminus Family; InterPro: IPR009647 This conserved region of approximately 90 residues is found in a sub-group of bacterial Penicillin-Binding Proteins (PBPs). A variable length loop region separates this region from the transpeptidase unit (IPR001460 from INTERPRO). It is predicted to be a beta fold.
Probab=67.14 E-value=9 Score=34.08 Aligned_cols=50 Identities=10% Similarity=0.228 Sum_probs=34.5
Q ss_pred ceeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeec-cCCccEEEEEEeecCcc
Q 036343 460 MTLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKL-TRGKNQISLLSATVGLQ 517 (795)
Q Consensus 460 ~~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l-~~g~n~L~ILVEn~GRv 517 (795)
..|++.+-...++-||||+++|+.... ..+.+ .+ ..|.++|.+ +...|+.
T Consensus 34 l~l~a~~~~~~~~W~vdg~~~g~~~~~---~~~~~----~~~~~G~h~l~v-vD~~G~~ 84 (89)
T PF06832_consen 34 LVLKAAGGRGPVYWFVDGEPLGTTQPG---HQLFW----QPDRPGEHTLTV-VDAQGRS 84 (89)
T ss_pred EEEEEeCCCCcEEEEECCEEcccCCCC---CeEEe----CCCCCeeEEEEE-EcCCCCE
Confidence 456655556699999999999887532 12323 34 678888987 7777764
No 95
>KOG0626 consensus Beta-glucosidase, lactase phlorizinhydrolase, and related proteins [Carbohydrate transport and metabolism]
Probab=66.89 E-value=13 Score=43.73 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=85.0
Q ss_pred ChHHHHHHHHHcCCCEEEecccccccCCc---CceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 59 MWPDLIKKAKEGGLDAIETYVFWNAHEPL---RRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~---~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
.++++++.||++|++.-+.=|.|+-.=|. .+.-+-+|..-...+|+...++||...+-.= =| .+|.||.
T Consensus 92 ~ykeDv~Lmk~lgv~afRFSIsWSRIlP~G~~~~gVN~~Gi~fY~~LI~eL~~nGI~P~VTLf-----Hw---DlPq~Le 163 (524)
T KOG0626|consen 92 RYKEDVKLMKELGVDAFRFSISWSRILPNGRLTGGVNEAGIQFYNNLIDELLANGIEPFVTLF-----HW---DLPQALE 163 (524)
T ss_pred hhHHHHHHHHHcCCCeEEEEeehHhhCCCCCcCCCcCHHHHHHHHHHHHHHHHcCCeEEEEEe-----cC---CCCHHHH
Confidence 47899999999999999999999998885 3568889998899999999999998654420 13 4799887
Q ss_pred c-CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEee
Q 036343 136 N-MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQ 182 (795)
Q Consensus 136 ~-~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~Q 182 (795)
+ +-+-+ -+..=..|+++++-=|+++..++| .+..=|...|..++
T Consensus 164 DeYgGwL-n~~ivedF~~yA~~CF~~fGDrVK--~WiT~NEP~v~s~~ 208 (524)
T KOG0626|consen 164 DEYGGWL-NPEIVEDFRDYADLCFQEFGDRVK--HWITFNEPNVFSIG 208 (524)
T ss_pred HHhcccc-CHHHHHHHHHHHHHHHHHhcccce--eeEEecccceeeee
Confidence 6 44433 333345688888888888888888 54444666666554
No 96
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=66.59 E-value=8.1 Score=42.37 Aligned_cols=69 Identities=14% Similarity=0.220 Sum_probs=49.2
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCc-CceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPL-RRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~-~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
..+..++.++++|+.|+..=.+.+-...+... -+.|.|+-. -|..++++..++.|++|++..-|+|+..
T Consensus 22 ~~~~v~~~~~~~~~~~iP~d~~~lD~~w~~~~~~~~f~~d~~~FPd~~~~i~~l~~~G~~~~~~~~P~i~~~ 93 (308)
T cd06593 22 DEEEVNEFADGMRERNLPCDVIHLDCFWMKEFQWCDFEFDPDRFPDPEGMLSRLKEKGFKVCLWINPYIAQK 93 (308)
T ss_pred CHHHHHHHHHHHHHcCCCeeEEEEecccccCCcceeeEECcccCCCHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 55667889999999997664444443333322 135555422 3899999999999999999998888653
No 97
>PRK09989 hypothetical protein; Provisional
Probab=65.97 E-value=51 Score=34.90 Aligned_cols=43 Identities=19% Similarity=0.401 Sum_probs=34.4
Q ss_pred ChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 59 MWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
-.+++|++++++|+..|++..+|. + +.+++.++.+++||.|..
T Consensus 16 ~l~~~l~~~~~~Gfd~VEl~~~~~----------~----~~~~~~~~l~~~Gl~v~~ 58 (258)
T PRK09989 16 PFIERFAAARKAGFDAVEFLFPYD----------Y----STLQIQKQLEQNHLTLAL 58 (258)
T ss_pred CHHHHHHHHHHcCCCEEEECCccc----------C----CHHHHHHHHHHcCCcEEE
Confidence 478999999999999999854332 2 367778889999999864
No 98
>PRK14705 glycogen branching enzyme; Provisional
Probab=65.73 E-value=11 Score=48.85 Aligned_cols=55 Identities=18% Similarity=0.265 Sum_probs=38.8
Q ss_pred HHHHHHHcCCCEEEe-ccc-------cccc--CCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 63 LIKKAKEGGLDAIET-YVF-------WNAH--EPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~-yv~-------Wn~h--Ep~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.|.-+|++|+|+|+. +|+ |... -...=.=.|....|+.+|++.|+++||.|||.-
T Consensus 771 lldYlk~LGvt~IeLmPv~e~p~~~swGY~~~~y~ap~~ryGt~~dfk~lVd~~H~~GI~VILD~ 835 (1224)
T PRK14705 771 LVDYVKWLGFTHVEFMPVAEHPFGGSWGYQVTSYFAPTSRFGHPDEFRFLVDSLHQAGIGVLLDW 835 (1224)
T ss_pred HHHHHHHhCCCEEEECccccCCCCCCCCCCccccCCcCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 368899999999998 453 3211 000001135566899999999999999999984
No 99
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=65.24 E-value=13 Score=39.72 Aligned_cols=52 Identities=27% Similarity=0.544 Sum_probs=39.2
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecC
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIG 118 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpG 118 (795)
+...++-|+.+|++||++|++ ..|..+.+ ..+..++|+.|+++|++|+--.|
T Consensus 83 q~~~~~yl~~~k~lGf~~IEi---------SdGti~l~-~~~r~~~I~~~~~~Gf~v~~EvG 134 (244)
T PF02679_consen 83 QGKFDEYLEECKELGFDAIEI---------SDGTIDLP-EEERLRLIRKAKEEGFKVLSEVG 134 (244)
T ss_dssp TT-HHHHHHHHHHCT-SEEEE-----------SSS----HHHHHHHHHHHCCTTSEEEEEES
T ss_pred cChHHHHHHHHHHcCCCEEEe---------cCCceeCC-HHHHHHHHHHHHHCCCEEeeccc
Confidence 667889999999999999987 35555544 34788999999999999999887
No 100
>TIGR00677 fadh2_euk methylenetetrahydrofolate reductase, eukaryotic type. This protein is an FAD-containing flavoprotein.
Probab=65.24 E-value=25 Score=38.34 Aligned_cols=109 Identities=14% Similarity=0.213 Sum_probs=71.0
Q ss_pred EEEEEEeeCCCCCCCC-hH---HHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCc
Q 036343 44 ILLSGSIHYPRSTPGM-WP---DLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGP 119 (795)
Q Consensus 44 ~~~sG~~hy~r~~~~~-W~---~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGP 119 (795)
+-+++..|+...+... .+ ++|++-.++|.+.+-|-.+ ||.+ .+.+|++.|++.|+.+=+-||.
T Consensus 130 f~igva~~Pe~Hp~~~~~~~d~~~L~~Ki~aGA~f~iTQ~~----------Fd~~---~~~~f~~~~~~~gi~~PIi~GI 196 (281)
T TIGR00677 130 FCIGVAGYPEGHPEAESVELDLKYLKEKVDAGADFIITQLF----------YDVD---NFLKFVNDCRAIGIDCPIVPGI 196 (281)
T ss_pred eEEEEEECCCCCCCCCCHHHHHHHHHHHHHcCCCEeeccce----------ecHH---HHHHHHHHHHHcCCCCCEEeec
Confidence 4678888887754322 22 3455444699999998766 4444 7899999999997765444444
Q ss_pred eee---------eeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHh
Q 036343 120 YVC---------AEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKK 167 (795)
Q Consensus 120 yic---------aEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~ 167 (795)
.-+ +||..--+|.|+.+. +.....+++...+.--++..++++.+.+
T Consensus 197 ~pi~s~~~~~~~~~~~Gi~vP~~l~~~--l~~~~~~~~~~~~~gi~~a~~~~~~l~~ 251 (281)
T TIGR00677 197 MPINNYASFLRRAKWSKTKIPQEIMSR--LEPIKDDDEAVRDYGIELIVEMCQKLLA 251 (281)
T ss_pred cccCCHHHHHHHHhcCCCCCCHHHHHH--HHhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333 577767789999741 1101233355566777788888888873
No 101
>PF01791 DeoC: DeoC/LacD family aldolase; InterPro: IPR002915 This family includes the enzyme deoxyribose-phosphate aldolase, which is involved in nucleotide metabolism. 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde The family also includes a group of related bacterial proteins of unknown function, see examples Q57843 from SWISSPROT and P76143 from SWISSPROT.; GO: 0016829 lyase activity; PDB: 2A4A_A 1VCV_B 1P1X_A 1KTN_B 1JCL_A 1JCJ_A 1MZH_A 3GKF_D 3GLC_L 3GND_N ....
Probab=64.54 E-value=3.3 Score=43.65 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
-...+.+.++|.+.|.+.++|....+..-.+... ++.++.+.|+++||.|||.
T Consensus 79 ~~~ve~A~~~GAd~vd~vi~~~~~~~~~~~~~~~---~i~~v~~~~~~~gl~vIlE 131 (236)
T PF01791_consen 79 VAEVEEAIRLGADEVDVVINYGALGSGNEDEVIE---EIAAVVEECHKYGLKVILE 131 (236)
T ss_dssp HHHHHHHHHTT-SEEEEEEEHHHHHTTHHHHHHH---HHHHHHHHHHTSEEEEEEE
T ss_pred HHHHHHHHHcCCceeeeeccccccccccHHHHHH---HHHHHHHHHhcCCcEEEEE
Confidence 4568899999999999999998877666555666 9999999999999999999
No 102
>KOG4729 consensus Galactoside-binding lectin [General function prediction only]
Probab=63.81 E-value=23 Score=38.09 Aligned_cols=154 Identities=16% Similarity=0.160 Sum_probs=97.6
Q ss_pred EEEEEcCeeecccccccccccCCCCCCCcCCCCCCCCCcccCCCCCCceeEEecCccccc---CCcce---EEEE--Eec
Q 036343 617 GFAWVNGYNLGRYWPTYLAEEDGCSTESCDYRGPYGSDKCAYNCGNPSQIWYHVPRSWIK---DGVNT---LVLF--EEF 688 (795)
Q Consensus 617 G~vwVNG~nLGRYW~~~~~~~~Gc~~~~~~~G~~~~~~~~~~~~~~PQqtlY~VP~~~Lk---~g~N~---Ivvf--Ee~ 688 (795)
-+|-|---|.||+-..+ |-+ .+ -.+++.+=| .|..+-+ +-+|. .||. +.+
T Consensus 54 dvIsv~sanYGR~~~~i------C~p----d~-----------~~~~Si~C~-~p~s~~i~~~rCnnr~~C~vvv~s~~F 111 (265)
T KOG4729|consen 54 DVISVQSANYGRFSDKI------CDP----DP-----------GREESINCY-LPKSFSILSSRCNNRRQCTVVVDSDVF 111 (265)
T ss_pred CEEEEEecccCcccccc------cCC----cc-----------ccccchhcc-ChHHHHHHHHhcCCCceEEEEecCCcc
Confidence 34555556789997544 222 21 122444556 6765442 22232 2333 355
Q ss_pred cCCCCceeeeeeecccccccc-------CCCCeeEEeeC-CeeEeEEeeeecCCCC---CCCCCc----ccccccCCCCc
Q 036343 689 GGNPSQINFQTVVVGTACGQA-------HENKTMELTCH-GRRISEIKYASFGDPQ---GACGAF----KKGSCEAEIDV 753 (795)
Q Consensus 689 g~~p~~i~l~~~~~~~vC~~~-------~E~~~~~L~C~-g~~I~~I~~A~YGr~~---~~C~~~----~~~~C~~~~~s 753 (795)
+.||.-=+-++-...+-|... |+-+.+...|+ .. +..++.+.+++.+ .+|..- ..-.|... ..
T Consensus 112 ~~DPCPgT~KYLev~Y~Cvp~~~~~kt~~~p~~~~~~~~~~~-~~~~e~~~~a~~~~~~~~~~~~~~~~~~~~~~~~-~~ 189 (265)
T KOG4729|consen 112 GDDPCPGTSKYLEVQYGCVPYAFTEKTFCTPSPTDPPRSEIR-LECREGRRLAVYSAVMKTSPQKDPETEIRHECVS-SV 189 (265)
T ss_pred CCCCCCCchhheEEEeccCccccccceEecCCCCCCccCccc-chhhhcccccccccccccCCCCcccCCCCceeec-cc
Confidence 667765555555566667765 77778888888 54 4468888888843 355421 22234444 56
Q ss_pred hHHHHhhCCCCCccEEEecCCCcCCCCCCCCCeeEEEEEEEC
Q 036343 754 LPLIEKQCVGKKSCSIEASEANLGATSCAAGTVKRLVVEALC 795 (795)
Q Consensus 754 ~~~v~~~C~Gk~~C~v~as~~~fg~DPC~~gt~KyL~v~y~C 795 (795)
+..+.+.|.+++.|+...++.-++ -+|-++..+|+-|.+.|
T Consensus 190 ~~~~~~~~~~~~~ct~~~~~~~~~-~~~~~~~~~~~~~n~e~ 230 (265)
T KOG4729|consen 190 LPQLLRQCHAKEGCTLKSDGIKGH-CRHGHLHKVYVTVTEEI 230 (265)
T ss_pred chhhhhcccccCCceeecCCcccc-ccccceeEEEEEecccc
Confidence 888999999999999999999988 58874666888887764
No 103
>PRK14510 putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme; Provisional
Probab=63.70 E-value=11 Score=49.33 Aligned_cols=56 Identities=27% Similarity=0.406 Sum_probs=40.1
Q ss_pred HHHHHHHHcCCCEEEe-cccccccCCc---Cc-----eee----------cc--CchHHHHHHHHHHHcCcEEEEec
Q 036343 62 DLIKKAKEGGLDAIET-YVFWNAHEPL---RR-----QYD----------FT--GNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~Wn~hEp~---~G-----~~d----------f~--g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.|.-+|++|+|+|++ +|+=+..|.. .| -|+ |. ...++.++++.|+++||.|||..
T Consensus 191 ~~i~yLk~LGvt~I~L~Pi~~~~~~~~~~~~g~~~yWGY~~~~yfa~dp~yg~~~~~efk~lV~~~H~~GI~VILDv 267 (1221)
T PRK14510 191 EAISYLKKLGVSIVELNPIFASVDEHHLPQLGLSNYWGYNTVAFLAPDPRLAPGGEEEFAQAIKEAQSAGIAVILDV 267 (1221)
T ss_pred hhHHHHHHcCCCEEEeCCccccCcccccccccCcCcCCCCCCCCCCcChhhccCcHHHHHHHHHHHHHCCCEEEEEE
Confidence 4566899999999998 5653332221 11 022 33 66799999999999999999984
No 104
>PF01261 AP_endonuc_2: Xylose isomerase-like TIM barrel; InterPro: IPR012307 This TIM alpha/beta barrel structure is found in xylose isomerase (P19148 from SWISSPROT) and in endonuclease IV (P12638 from SWISSPROT, 3.1.21.2 from EC). This domain is also found in the N termini of bacterial myo-inositol catabolism proteins. These are involved in the myo-inositol catabolism pathway, and is required for growth on myo-inositol in Rhizobium leguminosarum bv. viciae []. ; PDB: 3KWS_B 3DX5_A 3CQH_B 3CQI_A 3CQK_A 3CQJ_B 2G0W_B 1DXI_A 2ZDS_D 3TVA_B ....
Probab=62.58 E-value=63 Score=32.13 Aligned_cols=103 Identities=12% Similarity=0.069 Sum_probs=63.8
Q ss_pred ChHHHHHHHHHcCCCEEEeccc--ccccCC----cCceeeccCchHHHHHHHHHHHcCcEEE-EecCceeeeeeCCCCcc
Q 036343 59 MWPDLIKKAKEGGLDAIETYVF--WNAHEP----LRRQYDFTGNLDLIRFIKTIQDQGLYVI-LRIGPYVCAEWNYGGFP 131 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~yv~--Wn~hEp----~~G~~df~g~~dl~~fl~~a~~~gL~vi-lrpGPyicaEw~~GG~P 131 (795)
..++..+.+++.|+..+....+ |..... .+.. .-.....+.+.+++|++.|...+ +.+|.
T Consensus 28 ~~~~~~~~~~~~gl~i~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~~~i~~a~~lg~~~i~~~~g~------------ 94 (213)
T PF01261_consen 28 EAEELRRLLEDYGLKIASLHPPTNFWSPDEENGSANDE-REEALEYLKKAIDLAKRLGAKYIVVHSGR------------ 94 (213)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEESSSCTGTTSTTSSSH-HHHHHHHHHHHHHHHHHHTBSEEEEECTT------------
T ss_pred HHHHHHHHHHHcCCeEEEEecccccccccccccCcchh-hHHHHHHHHHHHHHHHHhCCCceeecCcc------------
Confidence 3456777888999997665544 333211 1111 22224589999999999999854 55442
Q ss_pred cccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccc
Q 036343 132 VWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNV 190 (795)
Q Consensus 132 ~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~ 190 (795)
|-.. .......-++.+.+.+++++++.+++. |.+-+||..+..
T Consensus 95 -~~~~------~~~~~~~~~~~~~~~l~~l~~~a~~~g---------v~i~lE~~~~~~ 137 (213)
T PF01261_consen 95 -YPSG------PEDDTEENWERLAENLRELAEIAEEYG---------VRIALENHPGPF 137 (213)
T ss_dssp -ESSS------TTSSHHHHHHHHHHHHHHHHHHHHHHT---------SEEEEE-SSSSS
T ss_pred -cccc------cCCCHHHHHHHHHHHHHHHHhhhhhhc---------ceEEEecccCcc
Confidence 1000 122234567788888999999988542 456789998864
No 105
>PF13199 Glyco_hydro_66: Glycosyl hydrolase family 66; PDB: 3VMO_A 3VMN_A 3VMP_A.
Probab=62.03 E-value=15 Score=43.94 Aligned_cols=78 Identities=15% Similarity=0.244 Sum_probs=48.1
Q ss_pred ChHHHHHHHHHcCCCEEEec-ccccccCCcCcee--------eccCc----hHHHHHHHHHHHcCcEEEEecCceeeeee
Q 036343 59 MWPDLIKKAKEGGLDAIETY-VFWNAHEPLRRQY--------DFTGN----LDLIRFIKTIQDQGLYVILRIGPYVCAEW 125 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~y-v~Wn~hEp~~G~~--------df~g~----~dl~~fl~~a~~~gL~vilrpGPyicaEw 125 (795)
.=+..|+.|+.+.||.|+.| ..|.+|.|-|+.= |+.++ .-+..+|+.|++.|+.++.=--=|-+-+.
T Consensus 119 ~~~~~i~~L~~yHIN~~QFYDW~~rH~~Pl~~~~~~~~~~w~D~~~r~i~~~~Vk~yI~~ah~~Gmkam~Ynmiyaa~~~ 198 (559)
T PF13199_consen 119 DIEAEIDQLNRYHINGLQFYDWMYRHHKPLPGTNGQPDQTWTDWANRQISTSTVKDYINAAHKYGMKAMAYNMIYAANNN 198 (559)
T ss_dssp HHHHHHHHHHHTT--EEEETS--SBTTB-S-SSS-EEE-TT-TTT--EEEHHHHHHHHHHHHHTT-EEEEEEESSEEETT
T ss_pred hHHHHHHHHHhhCcCeEEEEeeccccCCcCCCCCCchhhhhhhhcCCEehHHHHHHHHHHHHHcCcceehhHhhhccccC
Confidence 45678999999999999999 7899999987543 22332 46889999999999998754322222222
Q ss_pred --CCCCccccccc
Q 036343 126 --NYGGFPVWLHN 136 (795)
Q Consensus 126 --~~GG~P~WL~~ 136 (795)
..|=.|.|-+-
T Consensus 199 ~~~~gv~~eW~ly 211 (559)
T PF13199_consen 199 YEEDGVSPEWGLY 211 (559)
T ss_dssp --S--SS-GGBEE
T ss_pred cccccCCchhhhh
Confidence 25567889863
No 106
>PF14307 Glyco_tran_WbsX: Glycosyltransferase WbsX
Probab=61.99 E-value=63 Score=36.24 Aligned_cols=134 Identities=17% Similarity=0.309 Sum_probs=85.3
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHH---HcCcEEEEecCceeeeeeCCCCc-c
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQ---DQGLYVILRIGPYVCAEWNYGGF-P 131 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~---~~gL~vilrpGPyicaEw~~GG~-P 131 (795)
.|+..+.-++.+|+.|++.--.|-.| |.|.+-|++-++..- +.+|..-|. |.+..- =
T Consensus 56 ~p~v~~~Q~~lA~~~GI~gF~~~~Yw-----------f~gk~lLe~p~~~~l~~~~~d~pFcl~--------WAN~~w~~ 116 (345)
T PF14307_consen 56 DPEVMEKQAELAKEYGIDGFCFYHYW-----------FNGKRLLEKPLENLLASKEPDFPFCLC--------WANENWTR 116 (345)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEEeee-----------cCCchHHHHHHHHHHhcCCCCCcEEEE--------ECCChhhh
Confidence 45566778999999999999999877 456667777776554 334544444 444221 1
Q ss_pred cccccCCCcccccCCChhHH--HHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcccHHHHHHHHHHh
Q 036343 132 VWLHNMPGIEELRTTNKVFM--NEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMA 209 (795)
Q Consensus 132 ~WL~~~p~~~~~R~~d~~y~--~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~ 209 (795)
.|-....++. +- ..|. +..++.++.|++.+++..++--+|=||+++=--.+. ++-+++++.+++.+
T Consensus 117 ~w~g~~~~~l-~~---q~y~~~~d~~~~~~~l~~~F~D~rYikVdGKPv~~Iy~p~~~--------pd~~~~~~~wr~~a 184 (345)
T PF14307_consen 117 RWDGRNNEIL-IE---QKYSGEDDWKEHFRYLLPYFKDPRYIKVDGKPVFLIYRPGDI--------PDIKEMIERWREEA 184 (345)
T ss_pred ccCCCCcccc-cc---ccCCchhHHHHHHHHHHHHhCCCCceeECCEEEEEEECcccc--------cCHHHHHHHHHHHH
Confidence 2333333332 11 2222 224667788888888655555578899987432222 24578999999999
Q ss_pred hcCCCccceee
Q 036343 210 TSLDIGVPWIM 220 (795)
Q Consensus 210 ~~~g~~vp~~~ 220 (795)
+++|+..+.+.
T Consensus 185 ~~~G~~giyii 195 (345)
T PF14307_consen 185 KEAGLPGIYII 195 (345)
T ss_pred HHcCCCceEEE
Confidence 99999876543
No 107
>TIGR02103 pullul_strch alpha-1,6-glucosidases, pullulanase-type. Members of this protein family include secreted (or membrane-anchored) pullulanases of Gram-negative bacteria and pullulanase-type starch debranching enzymes of plants. Both enzymes hydrolyze alpha-1,6 glycosidic linkages. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family is closely homologous to, but architecturally different from, the Gram-positive pullulanases of Gram-positive bacteria (TIGR02102).
Probab=61.44 E-value=15 Score=46.41 Aligned_cols=21 Identities=14% Similarity=0.520 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHcCcEEEEec
Q 036343 97 LDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 97 ~dl~~fl~~a~~~gL~vilrp 117 (795)
.++.++++.|+++||.|||.-
T Consensus 404 ~Efk~mV~alH~~Gi~VIlDV 424 (898)
T TIGR02103 404 KEFREMVQALNKTGLNVVMDV 424 (898)
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 479999999999999999985
No 108
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase. This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis.
Probab=61.05 E-value=17 Score=45.31 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=44.7
Q ss_pred CCChHHHHHHHHHcCCCEEEec-cccc----ccCCcCc-----eeeccCchHHHHHHHHHHHcCcEEEEecCc
Q 036343 57 PGMWPDLIKKAKEGGLDAIETY-VFWN----AHEPLRR-----QYDFTGNLDLIRFIKTIQDQGLYVILRIGP 119 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~y-v~Wn----~hEp~~G-----~~df~g~~dl~~fl~~a~~~gL~vilrpGP 119 (795)
-+.|.+.|.-++++|+++|-+- |+=+ .|--..- .-.|.+..++.+|++.|+++||.|||..=|
T Consensus 15 f~~~~~~L~YL~~LGv~~V~lsPi~~a~~gs~hGYdv~D~~~idp~lGt~edf~~Lv~aah~~Gm~vIlDiVp 87 (825)
T TIGR02401 15 FDDAAALLPYLKSLGVSHLYLSPILTAVPGSTHGYDVVDHSEINPELGGEEGLRRLSEAARARGLGLIVDIVP 87 (825)
T ss_pred HHHHHHhhHHHHHcCCCEEEeCcCccCCCCCCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 3457899999999999999763 4311 1111100 113567899999999999999999998643
No 109
>PLN02361 alpha-amylase
Probab=60.20 E-value=19 Score=41.32 Aligned_cols=57 Identities=9% Similarity=0.121 Sum_probs=40.9
Q ss_pred HHHHHHHHHcCCCEEEecccccc---cCCcCce-e----eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNA---HEPLRRQ-Y----DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~---hEp~~G~-~----df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+.|.-++++|+++|-+.=+..- |--.+.. | .|....+|.++|+.|+++||+||+..
T Consensus 32 ~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~ 96 (401)
T PLN02361 32 EGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADI 96 (401)
T ss_pred HHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 36778889999999988644322 2112222 1 24556899999999999999999875
No 110
>PF02055 Glyco_hydro_30: O-Glycosyl hydrolase family 30; InterPro: IPR001139 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 30 GH30 from CAZY comprises enzymes with only one known activity; glucosylceramidase (3.2.1.45 from EC). Family 30 encompasses the mammalian glucosylceramidases. Human acid beta-glucosidase (D-glucosyl-N-acylsphingosine glucohydrolase), cleaves the glucosidic bonds of glucosylceramide and synthetic beta-glucosides []. Any one of over 50 different mutations in the gene of glucocerebrosidase have been found to affect activity of this hydrolase, producing variants of Gaucher disease, the most prevalent lysosomal storage disease [, ].; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0007040 lysosome organization, 0005764 lysosome; PDB: 2VT0_B 1NOF_A 2Y24_A 2WCG_B 2J25_A 3GXM_D 1Y7V_B 2NT0_C 3GXF_C 3GXD_A ....
Probab=59.87 E-value=45 Score=39.45 Aligned_cols=139 Identities=16% Similarity=0.282 Sum_probs=79.1
Q ss_pred HHcCCCEEEeccc---ccccCC----cCceee---ccCch-HH---HHHHHHHHHc--CcEEEEecCceeeeeeCCCCcc
Q 036343 68 KEGGLDAIETYVF---WNAHEP----LRRQYD---FTGNL-DL---IRFIKTIQDQ--GLYVILRIGPYVCAEWNYGGFP 131 (795)
Q Consensus 68 ka~G~N~V~~yv~---Wn~hEp----~~G~~d---f~g~~-dl---~~fl~~a~~~--gL~vilrpGPyicaEw~~GG~P 131 (795)
+-+|+|.+|+.|- .+.++- .|+-|+ |+=.+ |. --+|+.|++. +|+++.-| | ..|
T Consensus 110 ~G~g~s~~R~pIgssDfs~~~Yty~d~~~D~~l~~Fs~~~~d~~~~ip~ik~a~~~~~~lki~aSp-------W---SpP 179 (496)
T PF02055_consen 110 DGIGYSLLRVPIGSSDFSTRPYTYDDVPGDFNLSNFSIAREDKKYKIPLIKEALAINPNLKIFASP-------W---SPP 179 (496)
T ss_dssp TTT---EEEEEES--SSSSS---ST-STTHTTTTT---HHHHHTTHHHHHHHHHHHHTT-EEEEEE-------S------
T ss_pred CCceEEEEEeeccCcCCcCCcccccCCCCCCccccCCccccchhhHHHHHHHHHHhCCCcEEEEec-------C---CCC
Confidence 3489999999986 222211 233222 22111 32 3577877663 67877776 5 489
Q ss_pred cccccCCCcc---ccc-CCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccc-------c-ccCCc-cc
Q 036343 132 VWLHNMPGIE---ELR-TTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNV-------M-SDYGD-AG 198 (795)
Q Consensus 132 ~WL~~~p~~~---~~R-~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~-------~-~~~~~-~~ 198 (795)
+|++....+. .++ ..++.|.++...||.+-++.++++ |=||=++-+-||.... . ..+.+ ..
T Consensus 180 ~WMKtn~~~~g~g~l~g~~~~~y~~~yA~Y~vkfi~aY~~~------GI~i~aiT~QNEP~~~~~~~~~~~s~~~t~~~~ 253 (496)
T PF02055_consen 180 AWMKTNGSMNGGGSLKGSLGDEYYQAYADYFVKFIQAYKKE------GIPIWAITPQNEPDNGSDPNYPWPSMGWTPEEQ 253 (496)
T ss_dssp GGGBTTSSSCSS-BBSCGTTSHHHHHHHHHHHHHHHHHHCT------T--ESEEESSSSCCGGGSTT-SSC--B--HHHH
T ss_pred HHHccCCcCcCCCccCCCCCchhHHHHHHHHHHHHHHHHHC------CCCeEEEeccCCCCCCCCCCCCCCcCCCCHHHH
Confidence 9998643321 134 335689999999999999988844 4489999999998641 1 11222 34
Q ss_pred HHHHH-HHHHHhhcCCC--ccceeeeC
Q 036343 199 KSYIN-WCAKMATSLDI--GVPWIMCQ 222 (795)
Q Consensus 199 ~~y~~-~l~~~~~~~g~--~vp~~~~~ 222 (795)
++|+. +|.-.+++.++ ++-++..+
T Consensus 254 ~~Fi~~~LgP~l~~~~~g~d~kI~~~D 280 (496)
T PF02055_consen 254 ADFIKNYLGPALRKAGLGKDVKILIYD 280 (496)
T ss_dssp HHHHHHTHHHHHHTSTT-TTSEEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCCceEEEEEe
Confidence 67775 48889999877 77666554
No 111
>cd04908 ACT_Bt0572_1 N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains. Included in this CD is the N-terminal ACT domain of a novel protein composed almost entirely of two tandem ACT domains as seen in the uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related ACT domains. These tandem ACT domain proteins belong to the superfamily of ACT regulatory domains.
Probab=59.71 E-value=26 Score=29.06 Aligned_cols=56 Identities=14% Similarity=0.134 Sum_probs=43.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
.|..-.+.++.+.+.|+|...+|++= ++. ++.+.+.. .|.++..+..+++|..|.|
T Consensus 11 ~pG~La~v~~~l~~~~inI~~i~~~~--~~~-~~~~rl~~-~~~~~~~~~L~~~G~~v~~ 66 (66)
T cd04908 11 KPGRLAAVTEILSEAGINIRALSIAD--TSE-FGILRLIV-SDPDKAKEALKEAGFAVKL 66 (66)
T ss_pred CCChHHHHHHHHHHCCCCEEEEEEEe--cCC-CCEEEEEE-CCHHHHHHHHHHCCCEEEC
Confidence 35566788999999999999999732 333 58777755 4678999999999988754
No 112
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=58.05 E-value=20 Score=39.38 Aligned_cols=69 Identities=19% Similarity=0.328 Sum_probs=53.0
Q ss_pred CCCCCCChHHHHHHHHHcCCC--EEEecccccccCCcCceeeccC--chHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 53 PRSTPGMWPDLIKKAKEGGLD--AIETYVFWNAHEPLRRQYDFTG--NLDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 53 ~r~~~~~W~~~l~k~ka~G~N--~V~~yv~Wn~hEp~~G~~df~g--~~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
...+.+.-++.++++++.|+. +|-+-+.|. ..-|.|.|+- .-|..++++..++.|+++++..=|+|+.+
T Consensus 25 ~~~s~~~v~~~~~~~~~~~iP~d~i~iD~~w~---~~~g~f~~d~~~FPdp~~mi~~l~~~G~k~~l~i~P~i~~~ 97 (303)
T cd06592 25 ADINQETVLNYAQEIIDNGFPNGQIEIDDNWE---TCYGDFDFDPTKFPDPKGMIDQLHDLGFRVTLWVHPFINTD 97 (303)
T ss_pred cCcCHHHHHHHHHHHHHcCCCCCeEEeCCCcc---ccCCccccChhhCCCHHHHHHHHHHCCCeEEEEECCeeCCC
Confidence 345667778999999999965 666655663 3456666643 34899999999999999999999999754
No 113
>PRK14511 maltooligosyl trehalose synthase; Provisional
Probab=57.52 E-value=22 Score=44.73 Aligned_cols=64 Identities=19% Similarity=0.220 Sum_probs=46.4
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCc---ee----------eccCchHHHHHHHHHHHcCcEEEEecCceee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRR---QY----------DFTGNLDLIRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G---~~----------df~g~~dl~~fl~~a~~~gL~vilrpGPyic 122 (795)
+-+.+.+.|.-++++|+|+|-+-=++ +..+| -| .|.+..++.+|++.|+++||.|||..=|-=+
T Consensus 18 tf~~~~~~l~YL~~LGis~IyLsPi~---~a~~gs~hGYdv~D~~~idp~lGt~e~f~~Lv~aah~~Gi~VIlDiV~NH~ 94 (879)
T PRK14511 18 TFDDAAELVPYFADLGVSHLYLSPIL---AARPGSTHGYDVVDHTRINPELGGEEGLRRLAAALRAHGMGLILDIVPNHM 94 (879)
T ss_pred CHHHHHHHhHHHHHcCCCEEEECcCc---cCCCCCCCCCCcCCCCCcCCCCCCHHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 34558899999999999999774222 11122 11 2457789999999999999999998754433
No 114
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=57.35 E-value=38 Score=36.80 Aligned_cols=74 Identities=23% Similarity=0.363 Sum_probs=56.6
Q ss_pred EEECCeEEEEEEE--EeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeecc--CchHHHHHHHHHHHcCc
Q 036343 36 ITIDGERKILLSG--SIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFT--GNLDLIRFIKTIQDQGL 111 (795)
Q Consensus 36 ~~idG~p~~~~sG--~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~--g~~dl~~fl~~a~~~gL 111 (795)
+.+.|.+++++.| ++| +++.-.+.-+++|++|+..++.|.+=+-.. -+.|. |...+..+-+.+++.||
T Consensus 21 ~~~g~~~~~~iaGPCsie----~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs----~~s~~G~g~~gl~~l~~~~~~~Gl 92 (266)
T PRK13398 21 VVIGGEEKIIIAGPCAVE----SEEQMVKVAEKLKELGVHMLRGGAFKPRTS----PYSFQGLGEEGLKILKEVGDKYNL 92 (266)
T ss_pred EEEcCCCEEEEEeCCcCC----CHHHHHHHHHHHHHcCCCEEEEeeecCCCC----CCccCCcHHHHHHHHHHHHHHcCC
Confidence 6676678999988 343 455667788899999999999997653332 34666 56789999999999999
Q ss_pred EEEEec
Q 036343 112 YVILRI 117 (795)
Q Consensus 112 ~vilrp 117 (795)
.++-.|
T Consensus 93 ~~~te~ 98 (266)
T PRK13398 93 PVVTEV 98 (266)
T ss_pred CEEEee
Confidence 888775
No 115
>PRK12677 xylose isomerase; Provisional
Probab=56.95 E-value=1.1e+02 Score=35.14 Aligned_cols=90 Identities=14% Similarity=0.118 Sum_probs=55.3
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeecc---CchHHHHHHHHHHHcCcEEE-EecCceeeeeeCCCCcccc
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFT---GNLDLIRFIKTIQDQGLYVI-LRIGPYVCAEWNYGGFPVW 133 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~---g~~dl~~fl~~a~~~gL~vi-lrpGPyicaEw~~GG~P~W 133 (795)
-.+++.+++++++|+..|+.. .+..--|+.+ -...++++.+++++.||.|. +-|.-|....+..|+
T Consensus 31 ~~~~E~v~~~a~~Gf~gVElh------~~~l~p~~~~~~~~~~~~~~lk~~l~~~GL~v~~v~~n~f~~p~~~~g~---- 100 (384)
T PRK12677 31 LDPVEAVHKLAELGAYGVTFH------DDDLVPFGATDAERDRIIKRFKKALDETGLVVPMVTTNLFTHPVFKDGA---- 100 (384)
T ss_pred CCHHHHHHHHHHhCCCEEEec------ccccCCCCCChhhhHHHHHHHHHHHHHcCCeeEEEecCCCCCccccCCc----
Confidence 347899999999999999883 1111112222 11358999999999999976 444311111111111
Q ss_pred cccCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 134 LHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 134 L~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
+-+.|+..++...+.+.+.++.-+
T Consensus 101 ---------lts~d~~~R~~Ai~~~~r~IdlA~ 124 (384)
T PRK12677 101 ---------FTSNDRDVRRYALRKVLRNIDLAA 124 (384)
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345677777776666666666665
No 116
>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins. It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.
Probab=56.36 E-value=12 Score=31.55 Aligned_cols=47 Identities=26% Similarity=0.487 Sum_probs=28.8
Q ss_pred eeeeCCcceEEEEEECCEEEEEEEcccCCCceeEeeeeeccCCccEEEEEEeecCcccc
Q 036343 461 TLRINSSGQVLHAYVNGNYVDSQWTKYGASNDLFERPVKLTRGKNQISLLSATVGLQNY 519 (795)
Q Consensus 461 ~L~i~~~~D~a~VfVng~~vGt~~~~~~~~~~~~~~~v~l~~g~n~L~ILVEn~GRvNy 519 (795)
.|.|.+.-..|.|||||+++|... ..+. .++.|.++|. ++.-|...+
T Consensus 3 ~l~V~s~p~gA~V~vdg~~~G~tp-------~~~~---~l~~G~~~v~--v~~~Gy~~~ 49 (71)
T PF08308_consen 3 TLRVTSNPSGAEVYVDGKYIGTTP-------LTLK---DLPPGEHTVT--VEKPGYEPY 49 (71)
T ss_pred EEEEEEECCCCEEEECCEEeccCc-------ceee---ecCCccEEEE--EEECCCeeE
Confidence 456666556789999999999433 1121 1556765554 455564443
No 117
>PRK14507 putative bifunctional 4-alpha-glucanotransferase/malto-oligosyltrehalose synthase; Provisional
Probab=56.35 E-value=21 Score=47.81 Aligned_cols=61 Identities=18% Similarity=0.230 Sum_probs=46.1
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCc---ee----------eccCchHHHHHHHHHHHcCcEEEEecCc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRR---QY----------DFTGNLDLIRFIKTIQDQGLYVILRIGP 119 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G---~~----------df~g~~dl~~fl~~a~~~gL~vilrpGP 119 (795)
+-+.|.+.|.-+|++|+|+|-+-=++. ..+| -| .|.+..|+++|++.|+++||.|||..=|
T Consensus 756 tf~~~~~~l~Yl~~LGv~~i~lsPi~~---a~~gs~hGYdv~D~~~idp~lG~~edf~~Lv~~ah~~Gi~vilDiV~ 829 (1693)
T PRK14507 756 TFADAEAILPYLAALGISHVYASPILK---ARPGSTHGYDIVDHSQINPEIGGEEGFERFCAALKAHGLGQLLDIVP 829 (1693)
T ss_pred CHHHHHHHhHHHHHcCCCEEEECCCcC---CCCCCCCCCCCCCCCccCcccCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 445689999999999999997742222 2222 12 2567789999999999999999998743
No 118
>PF11875 DUF3395: Domain of unknown function (DUF3395); InterPro: IPR024586 Chaperone DnaJ was originally characterised from Escherichia coli as a 41 kDa heat shock protein. DnaJ has a modular structure consisting of a J-domain, a proximal G/F-domain, and a distal zinc finger domain, followed by less conserved C-terminal sequences. Since then, a large number of DnaJ-related proteins containing a J-domain have been characterised from a variety of different organisms. In the genome of Arabidopsis thaliana a total of 89 J-domain proteins have been identified []. This entry represents a C-terminal domain found in some eukaryotic DnaJ-like proteins, including member 11 from the subfamily C1 and protein DnaJ 13 from Arabidopsis. This domain is typically between 147 to 176 amino acids in length.
Probab=54.07 E-value=24 Score=35.01 Aligned_cols=66 Identities=21% Similarity=0.091 Sum_probs=34.6
Q ss_pred EeeeecCCCCC--CCCCcccc--cccCCCCchH-HHHhhCCCCCccEEEec----CCCcCC-CCCCCCC--eeEEEEEEE
Q 036343 727 IKYASFGDPQG--ACGAFKKG--SCEAEIDVLP-LIEKQCVGKKSCSIEAS----EANLGA-TSCAAGT--VKRLVVEAL 794 (795)
Q Consensus 727 I~~A~YGr~~~--~C~~~~~~--~C~~~~~s~~-~v~~~C~Gk~~C~v~as----~~~fg~-DPC~~gt--~KyL~v~y~ 794 (795)
|..|-||.... .+...... .+..+ ...+ .|.=.|.=+.++..-.. ..+.|. |||+ .. .|.|.|.|.
T Consensus 55 I~~A~YG~~~~~~~~~~~~~~~~~~~~~-~~iDVTipLq~lV~dS~L~l~~~~sKs~L~GF~DP~p-~~ge~K~L~V~Y~ 132 (151)
T PF11875_consen 55 ILKAWYGNLPAKSDESNNDEPEDPDLDP-PVIDVTIPLQALVKDSQLILPEGVSKSGLPGFYDPCP-FLGEPKQLRVRYR 132 (151)
T ss_pred EEEEEcCCcccccccccccccccccccC-cEEEEhhhhhhEeecCEEEEcCCCchhhCCCCCCCcc-ccCCccEEEEEEE
Confidence 66899999432 23211100 11111 1111 23444555556544333 223444 9998 55 999999996
No 119
>TIGR02100 glgX_debranch glycogen debranching enzyme GlgX. This family consists of the GlgX protein from the E. coli glycogen operon and probable equivalogs from other prokaryotic species. GlgX is not required for glycogen biosynthesis, but instead acts as a debranching enzyme for glycogen catabolism. This model distinguishes GlgX from pullanases and other related proteins that also operate on alpha-1,6-glycosidic linkages. In the wide band between the trusted and noise cutoffs are functionally similar enzymes, mostly from plants, that act similarly but usually are termed isoamylase.
Probab=53.42 E-value=22 Score=43.79 Aligned_cols=55 Identities=22% Similarity=0.371 Sum_probs=37.6
Q ss_pred HHHHHHHcCCCEEEe-cccccccC---CcCc-----eee----------c---cCchHHHHHHHHHHHcCcEEEEec
Q 036343 63 LIKKAKEGGLDAIET-YVFWNAHE---PLRR-----QYD----------F---TGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~-yv~Wn~hE---p~~G-----~~d----------f---~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.|.-+|++|+|+|.+ +|+=...+ ...| -|| | ....+|.++|+.|+++||.|||..
T Consensus 189 ~LdyLk~LGvtaI~L~Pi~~~~~~~~~~~~~~~~ywGYd~~~y~a~d~~y~~~g~~~efk~LV~~~H~~GI~VIlDv 265 (688)
T TIGR02100 189 MIDYLKKLGVTAVELLPVHAFIDDRHLLEKGLRNYWGYNTLGFFAPEPRYLASGQVAEFKTMVRALHDAGIEVILDV 265 (688)
T ss_pred hhHHHHHcCCCEEEECCcccCCccccccccCCCCccCcCcccccccChhhcCCCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 377899999999998 45411111 1111 121 2 124689999999999999999985
No 120
>PLN02877 alpha-amylase/limit dextrinase
Probab=53.28 E-value=25 Score=44.59 Aligned_cols=21 Identities=19% Similarity=0.604 Sum_probs=19.1
Q ss_pred hHHHHHHHHHHHcCcEEEEec
Q 036343 97 LDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 97 ~dl~~fl~~a~~~gL~vilrp 117 (795)
.++.++++.++++||.|||.-
T Consensus 466 ~efk~mV~~lH~~GI~VImDV 486 (970)
T PLN02877 466 IEFRKMVQALNRIGLRVVLDV 486 (970)
T ss_pred HHHHHHHHHHHHCCCEEEEEE
Confidence 469999999999999999985
No 121
>PRK14582 pgaB outer membrane N-deacetylase; Provisional
Probab=52.16 E-value=50 Score=40.51 Aligned_cols=110 Identities=11% Similarity=0.033 Sum_probs=66.2
Q ss_pred ChHHHHHHHHHcCCCEEEe---------------cccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeee
Q 036343 59 MWPDLIKKAKEGGLDAIET---------------YVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~---------------yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyica 123 (795)
.-...|+.+|++|+|||=. |++| -|= ||+-|.= .-+ ...++.+.|+.|-.|-.||-..
T Consensus 335 ~L~~lLdrlk~~G~ntV~lqafadp~gd~~~~s~yfP~-~~l--p~r~d~f--~~~--aw~l~~r~~v~v~AWmp~~~~~ 407 (671)
T PRK14582 335 NIDVLIQRVKDMQISTVYLQAFADPDGDGLVKELYFPN-RLL--PMRADLF--NRV--AWQLRTRAGVNVYAWMPVLSFD 407 (671)
T ss_pred HHHHHHHHHHHcCCCEEEEEeccCCCCCccccccccCc-ccc--ccccCCc--CHH--HHHHHHhhCCEEEEeccceeec
Confidence 3567899999999999854 4456 332 3333311 012 2345889999999999998631
Q ss_pred ---------eeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccccc
Q 036343 124 ---------EWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEY 187 (795)
Q Consensus 124 ---------Ew~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEy 187 (795)
+++..+-|.... |+-. .| =.+|..++++|++.|.+-|+.+ .+|=++|..-+-
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~--~~~~-~r--l~P~~pe~r~~i~~i~~dla~~-------~~~dGilf~Dd~ 468 (671)
T PRK14582 408 LDPTLPRVKRLDTGEGKAQIH--PEQY-RR--LSPFDDRVRAQVGMLYEDLAGH-------AAFDGILFHDDA 468 (671)
T ss_pred cCCCcchhhhccccCCccccC--CCCC-cC--CCCCCHHHHHHHHHHHHHHHHh-------CCCceEEecccc
Confidence 111111121111 1100 12 2457788999999999998854 256667765554
No 122
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=51.17 E-value=20 Score=39.76 Aligned_cols=66 Identities=14% Similarity=0.192 Sum_probs=48.3
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCc--eeeccCc--hHHHHHHHHHHHcCcEEEEecCceee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRR--QYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G--~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyic 122 (795)
..+.-++.++++++.||..=.+.+-|.... ..+ .|+|+-. -|..++|+..++.|++|++..=|+|.
T Consensus 22 ~~~ev~~~~~~~~~~~iP~d~i~lD~~~~~-~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~P~v~ 91 (319)
T cd06591 22 TQEELLDVAKEYRKRGIPLDVIVQDWFYWP-KQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIWPTFG 91 (319)
T ss_pred CHHHHHHHHHHHHHhCCCccEEEEechhhc-CCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEecCCcC
Confidence 344557889999999888666666555443 234 7766643 38999999999999999998766663
No 123
>PRK03705 glycogen debranching enzyme; Provisional
Probab=50.81 E-value=26 Score=42.82 Aligned_cols=55 Identities=27% Similarity=0.369 Sum_probs=37.5
Q ss_pred HHHHHHHcCCCEEEe-cccccccCCcC---c-----eee----------ccC-----chHHHHHHHHHHHcCcEEEEec
Q 036343 63 LIKKAKEGGLDAIET-YVFWNAHEPLR---R-----QYD----------FTG-----NLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~-yv~Wn~hEp~~---G-----~~d----------f~g-----~~dl~~fl~~a~~~gL~vilrp 117 (795)
.|.-+|++|+|+|.+ +|+=...|+.. | -|| |.. ..++.++++.|+++||.|||..
T Consensus 184 ~LdYLk~LGvt~I~L~Pv~~~~~~~~~~~~g~~~ywGYd~~~yfa~d~~ygt~~~~~~~efk~LV~~~H~~GI~VIlDv 262 (658)
T PRK03705 184 MIAYLKQLGITALELLPVAQFASEPRLQRMGLSNYWGYNPLAMFALDPAYASGPETALDEFRDAVKALHKAGIEVILDV 262 (658)
T ss_pred chHHHHHcCCCEEEecCcccCCCcccccccccccccCcccccccccccccCCCCcchHHHHHHHHHHHHHCCCEEEEEE
Confidence 488899999999998 45422222210 1 011 222 2589999999999999999985
No 124
>COG3623 SgaU Putative L-xylulose-5-phosphate 3-epimerase [Carbohydrate transport and metabolism]
Probab=50.09 E-value=1.7e+02 Score=31.40 Aligned_cols=124 Identities=20% Similarity=0.408 Sum_probs=77.1
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCCcC--ceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccc
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLR--RQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWL 134 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~--G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL 134 (795)
.-.|+++|.-+|++||+.|+.-| -|..+ -+.||+. ...-.+.+++++.|+.+ |-+| |
T Consensus 17 ~~sW~erl~~AK~~GFDFvEmSv----DEsDeRLaRLDWs~-~er~~l~~ai~etgv~i-----pSmC-----------l 75 (287)
T COG3623 17 GFSWLERLALAKELGFDFVEMSV----DESDERLARLDWSK-EERLALVNAIQETGVRI-----PSMC-----------L 75 (287)
T ss_pred CCCHHHHHHHHHHcCCCeEEEec----cchHHHHHhcCCCH-HHHHHHHHHHHHhCCCc-----cchh-----------h
Confidence 34599999999999999999865 34432 4567762 24556788889999832 2333 1
Q ss_pred ccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCc----ccHHHH---HHHHH
Q 036343 135 HNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGD----AGKSYI---NWCAK 207 (795)
Q Consensus 135 ~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~----~~~~y~---~~l~~ 207 (795)
..+..- |+-|.|+.-++..-..+.+-+..-. ++ .|=-+|+- -|.-| |.+ ..+.|. +|..+
T Consensus 76 SaHRRf-PfGS~D~~~r~~aleiM~KaI~LA~--dL------GIRtIQLA-GYDVY---YE~~d~eT~~rFi~g~~~a~~ 142 (287)
T COG3623 76 SAHRRF-PFGSKDEATRQQALEIMEKAIQLAQ--DL------GIRTIQLA-GYDVY---YEEADEETRQRFIEGLKWAVE 142 (287)
T ss_pred hhhccC-CCCCCCHHHHHHHHHHHHHHHHHHH--Hh------CceeEeec-cceee---eccCCHHHHHHHHHHHHHHHH
Confidence 122221 2779999999888888887766555 44 35667872 23322 332 234444 45555
Q ss_pred HhhcCCC
Q 036343 208 MATSLDI 214 (795)
Q Consensus 208 ~~~~~g~ 214 (795)
++.++++
T Consensus 143 lA~~aqV 149 (287)
T COG3623 143 LAARAQV 149 (287)
T ss_pred HHHhhcc
Confidence 5665554
No 125
>cd06545 GH18_3CO4_chitinase The Bacteroides thetaiotaomicron protein represented by pdb structure 3CO4 is an uncharacterized bacterial member of the family 18 glycosyl hydrolases with homologs found in Flavobacterium, Stigmatella, and Pseudomonas.
Probab=49.87 E-value=51 Score=34.99 Aligned_cols=96 Identities=7% Similarity=0.029 Sum_probs=55.8
Q ss_pred Cceeecc-CchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 88 RRQYDFT-GNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 88 ~G~~df~-g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.|...+. ...++..+++.|++.|++|++..| .|.... +. .+ + .++. .-+++.+.+++.++
T Consensus 36 ~G~l~~~~~~~~~~~~~~~~~~~~~kvl~sig-----g~~~~~---~~----~~--~--~~~~---~r~~fi~~lv~~~~ 96 (253)
T cd06545 36 NGTLNANPVRSELNSVVNAAHAHNVKILISLA-----GGSPPE---FT----AA--L--NDPA---KRKALVDKIINYVV 96 (253)
T ss_pred CCeEEecCcHHHHHHHHHHHHhCCCEEEEEEc-----CCCCCc---ch----hh--h--cCHH---HHHHHHHHHHHHHH
Confidence 4666664 345789999999999999999986 122111 11 01 1 2333 23467888888888
Q ss_pred hccccccCCCcEEEeecccccccccccCCcccHHHHHHHHHHhhcCC
Q 036343 167 KEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATSLD 213 (795)
Q Consensus 167 ~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~g 213 (795)
++++ =++.|+=|+.... ...=..+++.|++.+++.|
T Consensus 97 ~~~~--------DGIdiDwE~~~~~---~~~~~~fv~~Lr~~l~~~~ 132 (253)
T cd06545 97 SYNL--------DGIDVDLEGPDVT---FGDYLVFIRALYAALKKEG 132 (253)
T ss_pred HhCC--------CceeEEeeccCcc---HhHHHHHHHHHHHHHhhcC
Confidence 6654 2445666765310 1112345666666665544
No 126
>PF08531 Bac_rhamnosid_N: Alpha-L-rhamnosidase N-terminal domain; InterPro: IPR013737 This domain is found in bacterial rhamnosidase A and B enzymes and is probably involved in substrate recognition. ; PDB: 2OKX_B.
Probab=49.62 E-value=25 Score=35.40 Aligned_cols=22 Identities=27% Similarity=0.406 Sum_probs=19.2
Q ss_pred EEEeCCceeEEEEEcCeeeccc
Q 036343 608 VLNLQGMGKGFAWVNGYNLGRY 629 (795)
Q Consensus 608 ~Ld~~g~gKG~vwVNG~nLGRY 629 (795)
.|.+++.|+=.+||||+.+|+-
T Consensus 7 ~l~isa~g~Y~l~vNG~~V~~~ 28 (172)
T PF08531_consen 7 RLYISALGRYELYVNGERVGDG 28 (172)
T ss_dssp EEEEEEESEEEEEETTEEEEEE
T ss_pred EEEEEeCeeEEEEECCEEeeCC
Confidence 5778888899999999999974
No 127
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=49.11 E-value=29 Score=44.90 Aligned_cols=56 Identities=20% Similarity=0.351 Sum_probs=38.3
Q ss_pred HHHHHHHHcCCCEEEe-ccc-c-cccCCc-----------Cceeecc-------------------C---chHHHHHHHH
Q 036343 62 DLIKKAKEGGLDAIET-YVF-W-NAHEPL-----------RRQYDFT-------------------G---NLDLIRFIKT 105 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~-W-n~hEp~-----------~G~~df~-------------------g---~~dl~~fl~~ 105 (795)
+.|.-+|++|+|+|++ +|+ . ...|.. ...|+|. + ..+|.++|+.
T Consensus 484 ekLdYLkeLGVT~I~LmPv~d~~~~~e~~~~~~~~~~~~~~~~ynWGYdp~~yfape~~Ygtdp~dp~~ri~EfK~LV~a 563 (1111)
T TIGR02102 484 EKLDYLQDLGVTHIQLLPVLSYFFVNEFKNKERMLDYASSNTNYNWGYDPQNYFALSGMYSEDPKDPELRIAEFKNLINE 563 (1111)
T ss_pred HhHHHHHHcCCCEEEEcCccccccccccccccccccccccccccccCCCcCcCcccccccccCCcCccccHHHHHHHHHH
Confidence 5689999999999998 353 1 112211 1122211 1 3689999999
Q ss_pred HHHcCcEEEEec
Q 036343 106 IQDQGLYVILRI 117 (795)
Q Consensus 106 a~~~gL~vilrp 117 (795)
|+++||.|||..
T Consensus 564 lH~~GI~VILDV 575 (1111)
T TIGR02102 564 IHKRGMGVILDV 575 (1111)
T ss_pred HHHCCCEEEEec
Confidence 999999999985
No 128
>TIGR02455 TreS_stutzeri trehalose synthase, Pseudomonas stutzeri type. Trehalose synthase catalyzes a one-step conversion of maltose to trehalose. This is an alternative to the OtsAB and TreYZ pathways. This family includes a characterized example from Pseudomonas stutzeri plus very closely related sequences from other Pseudomonads. Cutoff scores are set to find a more distantly related sequence from Desulfovibrio vulgaris, likely to be functionally equivalent, between trusted and noise limits.
Probab=48.67 E-value=37 Score=41.26 Aligned_cols=75 Identities=17% Similarity=0.304 Sum_probs=54.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEec-cc-----cc--ccCCcCceee---------ccCchHHHHHHHHHHHcCcEEEEec-
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETY-VF-----WN--AHEPLRRQYD---------FTGNLDLIRFIKTIQDQGLYVILRI- 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~y-v~-----Wn--~hEp~~G~~d---------f~g~~dl~~fl~~a~~~gL~vilrp- 117 (795)
.+..|+ -++++|+++|-+- ++ |. .---..|-|| |.-..|++++++.|+++||+||+..
T Consensus 76 ~~~~wd----yL~~LGV~~iwl~P~~~SGgi~g~~~tP~~D~gyDi~d~~Idp~~GT~eDf~~L~~~Ah~~G~~vi~DlV 151 (688)
T TIGR02455 76 DDALWK----ALSEIGVQGIHNGPIKLSGGIRGREFTPSIDGNFDRISFDIDPLLGSEEELIQLSRMAAAHNAITIDDII 151 (688)
T ss_pred ChHHHH----HHHHhCCCEEEeCcceecccccccCCCCCCCCCCCcccCccCcccCCHHHHHHHHHHHHHCCCEEEEEeC
Confidence 555665 7889999999763 32 32 2222345666 3445799999999999999999765
Q ss_pred -------CceeeeeeCCCCccccc
Q 036343 118 -------GPYVCAEWNYGGFPVWL 134 (795)
Q Consensus 118 -------GPyicaEw~~GG~P~WL 134 (795)
-||.-||++.+-+|.|.
T Consensus 152 pnHTs~ghdF~lAr~~~~~Y~g~Y 175 (688)
T TIGR02455 152 PAHTGKGADFRLAELAHGDYPGLY 175 (688)
T ss_pred CCCCCCCcchHHHhhcCCCCCCce
Confidence 45778888887788877
No 129
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=47.42 E-value=36 Score=36.33 Aligned_cols=51 Identities=20% Similarity=0.439 Sum_probs=42.2
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecC
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIG 118 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpG 118 (795)
...++.++.+|++||++|++ ..|..+++ ..+..++|+.++++||+|+--.|
T Consensus 71 ~~~~~Yl~~~k~lGf~~IEi---------S~G~~~i~-~~~~~rlI~~~~~~g~~v~~EvG 121 (237)
T TIGR03849 71 GKFDEYLNECDELGFEAVEI---------SDGSMEIS-LEERCNLIERAKDNGFMVLSEVG 121 (237)
T ss_pred hhHHHHHHHHHHcCCCEEEE---------cCCccCCC-HHHHHHHHHHHHhCCCeEecccc
Confidence 56677888999999999987 45666665 34788999999999999997776
No 130
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=45.99 E-value=30 Score=39.36 Aligned_cols=102 Identities=18% Similarity=0.219 Sum_probs=72.9
Q ss_pred hHHHHHHHHHHHHhhccccceeEEeeCceEEECCeEEEEEEEEeeCCC-CCCCChHHHHHHHHHc-CCCEEEeccccccc
Q 036343 7 CSRAILLCLILQTLFNLSLAYRVSHDGRAITIDGERKILLSGSIHYPR-STPGMWPDLIKKAKEG-GLDAIETYVFWNAH 84 (795)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~idG~p~~~~sG~~hy~r-~~~~~W~~~l~k~ka~-G~N~V~~yv~Wn~h 84 (795)
|+-++=+++.+++ .+...|=.-+-.|-++-.+-.+..=|+.|+- .|.+.|+-+|.-+.++ -=||+.+-| =|=+
T Consensus 135 C~qAIe~~i~~LA----~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivv-iNP~ 209 (447)
T KOG0259|consen 135 CSQAIELAISSLA----NPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVV-INPN 209 (447)
T ss_pred chHHHHHHHHHhc----CCCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEE-eCCC
Confidence 4445555554442 3333454555555555544444555666655 5788899999999987 778988865 4788
Q ss_pred CCcCceeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 85 EPLRRQYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 85 Ep~~G~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
.|--++|.-. .|.+++++|+++||-||-.
T Consensus 210 NPcGnVys~~---HL~kiae~A~klgi~vIaD 238 (447)
T KOG0259|consen 210 NPCGNVYSED---HLKKIAETAKKLGIMVIAD 238 (447)
T ss_pred CCCcccccHH---HHHHHHHHHHHhCCeEEeh
Confidence 8889999998 9999999999999998865
No 131
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=45.85 E-value=32 Score=37.75 Aligned_cols=59 Identities=15% Similarity=0.196 Sum_probs=47.6
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc----ccccCC----------------cCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF----WNAHEP----------------LRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~----Wn~hEp----------------~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
+.+..++.++.|...++|++..++- |.+--+ ..|.|.-+ |+.++++.|++.|+.||.
T Consensus 14 ~~~~lk~~id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~~~~~~~~~~yT~~---di~elv~yA~~rgI~viP 90 (303)
T cd02742 14 SVESIKRTIDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQINPRSPGGFYTYA---QLKDIIEYAAARGIEVIP 90 (303)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhcccccCCCCCCeECHH---HHHHHHHHHHHcCCEEEE
Confidence 6778899999999999999999987 755321 22345555 999999999999999997
Q ss_pred ec
Q 036343 116 RI 117 (795)
Q Consensus 116 rp 117 (795)
-+
T Consensus 91 Ei 92 (303)
T cd02742 91 EI 92 (303)
T ss_pred ec
Confidence 65
No 132
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=45.56 E-value=60 Score=35.74 Aligned_cols=58 Identities=17% Similarity=0.202 Sum_probs=44.3
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc----ccccCCc----CceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF----WNAHEPL----RRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~----Wn~hEp~----~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.++-++.++.|...|+|++..|+- +.-+ |+ +|.|.- .|+.++++.|++.||.||--.
T Consensus 15 ~~~~lk~~id~ma~~k~N~l~lhl~D~f~~~~~-p~~~~~~~~yT~---~ei~ei~~yA~~~gI~vIPei 80 (301)
T cd06565 15 KVSYLKKLLRLLALLGANGLLLYYEDTFPYEGE-PEVGRMRGAYTK---EEIREIDDYAAELGIEVIPLI 80 (301)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecceecCCC-cccccCCCCcCH---HHHHHHHHHHHHcCCEEEecC
Confidence 3467789999999999999999863 3322 22 344444 499999999999999999765
No 133
>PF11324 DUF3126: Protein of unknown function (DUF3126); InterPro: IPR021473 This family of proteins with unknown function appear to be restricted to Alphaproteobacteria.
Probab=45.17 E-value=49 Score=28.18 Aligned_cols=23 Identities=4% Similarity=0.277 Sum_probs=19.8
Q ss_pred CcceEEEEEECCEEEEEEEcccC
Q 036343 466 SSGQVLHAYVNGNYVDSQWTKYG 488 (795)
Q Consensus 466 ~~~D~a~VfVng~~vGt~~~~~~ 488 (795)
...|.|.||++++++|++++...
T Consensus 25 k~~dsaEV~~g~EfiGvi~~Ded 47 (63)
T PF11324_consen 25 KKDDSAEVYIGDEFIGVIYRDED 47 (63)
T ss_pred CCCCceEEEeCCEEEEEEEeecC
Confidence 56899999999999999997533
No 134
>TIGR00676 fadh2 5,10-methylenetetrahydrofolate reductase, prokaryotic form. This protein is an FAD-containing flavoprotein.
Probab=45.00 E-value=90 Score=33.78 Aligned_cols=109 Identities=19% Similarity=0.215 Sum_probs=69.1
Q ss_pred EEEEEEEeeCCCCCCCCh----HHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE--EEe
Q 036343 43 KILLSGSIHYPRSTPGMW----PDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV--ILR 116 (795)
Q Consensus 43 ~~~~sG~~hy~r~~~~~W----~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v--ilr 116 (795)
.+.+++..|+.+.+.... .++|++-.++|.+.+-|-.+ ||.+ .+.+|++.+++.|+.+ ++.
T Consensus 125 ~f~ig~a~~Peghp~~~~~~~~~~~L~~K~~aGA~f~iTQ~~----------fd~~---~~~~~~~~~~~~gi~~PIi~G 191 (272)
T TIGR00676 125 DFDIGVAAYPEKHPEAPNLEEDIENLKRKVDAGADYAITQLF----------FDND---DYYRFVDRCRAAGIDVPIIPG 191 (272)
T ss_pred CeeEEEEeCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeeccc----------cCHH---HHHHHHHHHHHcCCCCCEecc
Confidence 467889998877544322 24566677899998888665 4444 7899999999997664 444
Q ss_pred cCceee-------eeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 117 IGPYVC-------AEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 117 pGPyic-------aEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
.-|-.. ++|..-.+|.|+.+. +.....+....+++.-++..++++.+.
T Consensus 192 i~p~~s~k~~~~~~~~~Gv~vP~~~~~~--l~~~~~~~~~~~~~gi~~~~~~~~~l~ 246 (272)
T TIGR00676 192 IMPITNFKQLLRFAERCGAEIPAWLVKR--LEKYDDDPEEVRAVGIEYATDQCEDLI 246 (272)
T ss_pred cCCcCCHHHHHHHHhccCCCCCHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 433322 225556678888641 110111223566677777777777776
No 135
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=44.19 E-value=30 Score=38.60 Aligned_cols=74 Identities=9% Similarity=0.077 Sum_probs=53.0
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
+|..|. ..++-++.++++++.||..=.+.+-+... ...+.|+|+-. -|..++++..++.|++|++..=|+|+.+
T Consensus 13 ~~~sr~~y~~~~ev~~~~~~~~~~~iP~d~i~lD~~~~-~~~~~f~~d~~~FPdp~~mi~~L~~~G~k~~~~~~P~v~~~ 91 (339)
T cd06603 13 YHQCRWNYKDQEDVKEVDAGFDEHDIPYDVIWLDIEHT-DGKRYFTWDKKKFPDPEKMQEKLASKGRKLVTIVDPHIKRD 91 (339)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCceEEEEChHHh-CCCCceEeCcccCCCHHHHHHHHHHCCCEEEEEecCceecC
Confidence 344454 34445788999999998865555543322 34566776532 3899999999999999999999999854
No 136
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=43.49 E-value=32 Score=38.08 Aligned_cols=68 Identities=16% Similarity=0.125 Sum_probs=48.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCC-----cCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEP-----LRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp-----~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyica 123 (795)
..+..++.++++++.||-.=.+.+-+..+.. .-|.|+|+-. -|..++++..++.|++|++..=|+|+.
T Consensus 22 ~~~~v~~~~~~~~~~~iP~d~i~lD~~w~~~~~~~~~~~~f~wd~~~FPdp~~mi~~L~~~G~k~~~~v~P~v~~ 96 (317)
T cd06598 22 NWQEVDDTIKTLREKDFPLDAAILDLYWFGKDIDKGHMGNLDWDRKAFPDPAGMIADLAKKGVKTIVITEPFVLK 96 (317)
T ss_pred CHHHHHHHHHHHHHhCCCceEEEEechhhcCcccCCceeeeEeccccCCCHHHHHHHHHHcCCcEEEEEcCcccC
Confidence 3455678999999999876555554333332 2356666432 389999999999999999998777753
No 137
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=43.42 E-value=32 Score=38.51 Aligned_cols=74 Identities=14% Similarity=0.235 Sum_probs=54.6
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHH--HHHHHHHHHcCcEEEEecCceee
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDL--IRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl--~~fl~~a~~~gL~vilrpGPyic 122 (795)
+|..|. +.+..++.++++++.||..=.+.+-+..++. .+.|.|+.. -|. +++++..++.|++|++..=|+|+
T Consensus 13 ~~~s~~~y~~~~~v~~~~~~~r~~~iP~d~i~lD~~~~~~-~~~f~~d~~~FPdp~~~~mi~~L~~~G~k~~~~i~P~v~ 91 (339)
T cd06602 13 FHLCRWGYKNVDEVKEVVENMRAAGIPLDVQWNDIDYMDR-RRDFTLDPVRFPGLKMPEFVDELHANGQHYVPILDPAIS 91 (339)
T ss_pred hHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECcccccC-ccceecccccCCCccHHHHHHHHHHCCCEEEEEEeCccc
Confidence 455554 3455778999999999986665554444432 467776643 377 99999999999999999999998
Q ss_pred ee
Q 036343 123 AE 124 (795)
Q Consensus 123 aE 124 (795)
.+
T Consensus 92 ~~ 93 (339)
T cd06602 92 AN 93 (339)
T ss_pred cC
Confidence 64
No 138
>COG0366 AmyA Glycosidases [Carbohydrate transport and metabolism]
Probab=43.29 E-value=32 Score=39.63 Aligned_cols=56 Identities=27% Similarity=0.378 Sum_probs=40.6
Q ss_pred HHHHHHHHcCCCEEEe-ccc---ccccCCcCcee-----eccCchHHHHHHHHHHHcCcEEEEec
Q 036343 62 DLIKKAKEGGLDAIET-YVF---WNAHEPLRRQY-----DFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-yv~---Wn~hEp~~G~~-----df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.|.-+|.+|+++|=+ +++ -..|.--.-.| .|....|+.++++.|++.||+||+--
T Consensus 33 ~~LdYl~~LGv~aiwl~Pi~~s~~~~~gY~~~Dy~~id~~~Gt~~d~~~li~~~H~~gi~vi~D~ 97 (505)
T COG0366 33 EKLDYLKELGVDAIWLSPIFESPQADHGYDVSDYTKVDPHFGTEEDFKELVEEAHKRGIKVILDL 97 (505)
T ss_pred HhhhHHHHhCCCEEEeCCCCCCCccCCCccccchhhcCcccCCHHHHHHHHHHHHHCCCEEEEEe
Confidence 7888999999999954 233 11222111101 68888999999999999999999874
No 139
>cd06416 GH25_Lys1-like Lys-1 is a lysozyme encoded by the Caenorhabditis elegans lys-1 gene. This gene is one of a several lysozyme genes upregulated upon infection by the Gram-negative bacterial pathogen Serratia marcescens. Lys-1 contains a glycosyl hydrolase family 25 (GH25) catalytic domain. This family also includes Lys-5 from Caenorhabditis elegans.
Probab=43.00 E-value=47 Score=33.86 Aligned_cols=87 Identities=17% Similarity=0.299 Sum_probs=54.6
Q ss_pred EEeeCCCCC-----CCChHHHHHHHHHcCCCEEEecccccccCCcCceeec--cC-chHHHHHHHHHHHcCcEEEEecCc
Q 036343 48 GSIHYPRST-----PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDF--TG-NLDLIRFIKTIQDQGLYVILRIGP 119 (795)
Q Consensus 48 G~~hy~r~~-----~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df--~g-~~dl~~fl~~a~~~gL~vilrpGP 119 (795)
|.+||+|.. .++.+.-++.++..++.. ...|--.|..++.+.- +- ...+.+|+++.+++|.++++-.++
T Consensus 56 G~Yhf~~~~~~~~~~~Qa~~f~~~~~~~~~~~---~~i~lDiE~~~~~~~~~~~~~~~~~~~f~~~~~~~G~~~~iYt~~ 132 (196)
T cd06416 56 DVYFFPCINCCGSAAGQVQTFLQYLKANGIKY---GTVWIDIEQNPCQWSSDVASNCQFLQELVSAAKALGLKVGIYSSQ 132 (196)
T ss_pred ceEEEecCCCCCCHHHHHHHHHHHHHhCCCce---eEEEEEEecCCCCCcCCHHHHHHHHHHHHHHHHHhCCeEEEEcCc
Confidence 899998753 445667777887765432 1123344443444321 11 147889999999999999999887
Q ss_pred eeeee----e---CCCCcccccccC
Q 036343 120 YVCAE----W---NYGGFPVWLHNM 137 (795)
Q Consensus 120 yicaE----w---~~GG~P~WL~~~ 137 (795)
+---. . .+...|-|+...
T Consensus 133 ~~w~~~~~~~~~~~~~~ypLWiA~Y 157 (196)
T cd06416 133 YDWSQIFGSSYTCNFSSLPLWYAHY 157 (196)
T ss_pred chhccccCCCcCCCcCCCceEecCC
Confidence 63211 1 145689999764
No 140
>COG1306 Uncharacterized conserved protein [Function unknown]
Probab=42.22 E-value=42 Score=36.96 Aligned_cols=59 Identities=25% Similarity=0.331 Sum_probs=42.8
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc---ccccCCcCc--------eeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF---WNAHEPLRR--------QYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~---Wn~hEp~~G--------~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+..-..+++.+|..|+|++-+-+- =++.=|... +=.|- |+.-||+.|+|.|||+|.|+
T Consensus 75 ~kk~~de~fk~ikdn~~Na~ViD~Kdd~G~lty~s~d~~~~~~~sv~~f~---Di~~~iKkaKe~giY~IARi 144 (400)
T COG1306 75 LKKRLDELFKLIKDNNINAFVIDVKDDYGELTYPSSDEINKYTKSVNKFK---DIEPVIKKAKENGIYAIARI 144 (400)
T ss_pred ChhHHHHHHHHHHhCCCCEEEEEecCCCccEeccccchhhhhhhcccccc---ccHHHHHHHHhcCeEEEEEE
Confidence 4555678999999999999876543 112222222 22355 99999999999999999997
No 141
>TIGR00433 bioB biotin synthetase. Catalyzes the last step of the biotin biosynthesis pathway.
Probab=40.76 E-value=44 Score=36.10 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=37.4
Q ss_pred HHHHHHHHHcCCCEEEecccc--cccCCcCceeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 61 PDLIKKAKEGGLDAIETYVFW--NAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~W--n~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
++.+++||++|++.|...+-- +.++...+..+|+ +..+.++.++++|+.|...
T Consensus 123 ~e~l~~Lk~aG~~~v~i~~E~~~~~~~~i~~~~s~~---~~~~ai~~l~~~Gi~v~~~ 177 (296)
T TIGR00433 123 PEQAKRLKDAGLDYYNHNLDTSQEFYSNIISTHTYD---DRVDTLENAKKAGLKVCSG 177 (296)
T ss_pred HHHHHHHHHcCCCEEEEcccCCHHHHhhccCCCCHH---HHHHHHHHHHHcCCEEEEe
Confidence 688999999999999887651 1122222334555 6778899999999986543
No 142
>cd06418 GH25_BacA-like BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. BacA is homologous to the YbfG and YkuG lysins of Bacillus subtilis. BacA has a C-terminal catalytic glycosyl hydrolase family 25 (GH25) domain and an N-terminal peptidoglycan-binding domain comprised of three alpha helices which is similar to a domain found in matrixins.
Probab=39.99 E-value=1.7e+02 Score=30.75 Aligned_cols=90 Identities=9% Similarity=0.068 Sum_probs=65.3
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeecc-CchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFT-GNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWL 134 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~-g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL 134 (795)
.+..++..++.++++|+-.+-+|..... ....|..+ |..|=..-+++|+++|+ -+| -|-++
T Consensus 50 ~k~lt~~e~~~i~~~Gl~~~pIyq~~~~---~~~~~~~~~G~~dA~~A~~~A~~lG~----p~g-----------s~IYf 111 (212)
T cd06418 50 SKNLTATELETITAAGLKVFPIYQGGGY---SLDYFGYEQGVKDARDAVAAARALGF----PPG-----------TIIYF 111 (212)
T ss_pred CCCCCHHHHHHHHHCCCEEEEEEECCCc---cccccCHHHHHHHHHHHHHHHHHcCC----CCC-----------CEEEE
Confidence 6788999999999999999999998866 23334444 77899999999999998 333 33344
Q ss_pred ccCCCcccccCCChhHHHHHHHHHHHHHHHHHhc
Q 036343 135 HNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKE 168 (795)
Q Consensus 135 ~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~ 168 (795)
.-+.+. .+..+...+..||+.+.+.|...
T Consensus 112 avD~d~-----~~~~~~~~v~~Y~~a~~~~l~~~ 140 (212)
T cd06418 112 AVDFDA-----LDDEVTEVILPYFRGWNDALHEA 140 (212)
T ss_pred EeecCC-----CcchhHHHHHHHHHHHHHHHHhc
Confidence 322222 12236678888999888888744
No 143
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=39.58 E-value=1.3e+02 Score=34.73 Aligned_cols=84 Identities=15% Similarity=0.157 Sum_probs=58.0
Q ss_pred ceEEECCeEEEEEEEEeeCCCCCC---CChHHHHHHHHHcCCCE--E--EecccccccCCcCceeeccCchHHHHHHHHH
Q 036343 34 RAITIDGERKILLSGSIHYPRSTP---GMWPDLIKKAKEGGLDA--I--ETYVFWNAHEPLRRQYDFTGNLDLIRFIKTI 106 (795)
Q Consensus 34 ~~~~idG~p~~~~sG~~hy~r~~~---~~W~~~l~k~ka~G~N~--V--~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a 106 (795)
+...+.+.-|+|+.+.-+-++.++ +.-+.--+.+++.|++. | .....-|+-.|.+..++++ ..-+.+-|+.|
T Consensus 149 ~a~~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~~gi~~~~i~~HapYlINLASpd~e~rekS-v~~~~~eL~rA 227 (413)
T PTZ00372 149 NAYNIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKKYNYDPKFILPHGSYLINLANPDKEKREKS-YDAFLDDLQRC 227 (413)
T ss_pred HHHHcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHHcCCCcceEEeecCceecCCCCCHHHHHHH-HHHHHHHHHHH
Confidence 445677788999987777665432 22333445677777752 3 2222388888888888887 44677778999
Q ss_pred HHcCcE-EEEecC
Q 036343 107 QDQGLY-VILRIG 118 (795)
Q Consensus 107 ~~~gL~-vilrpG 118 (795)
++.|.. |++.||
T Consensus 228 ~~LGa~~VV~HPG 240 (413)
T PTZ00372 228 EQLGIKLYNFHPG 240 (413)
T ss_pred HHcCCCEEEECCC
Confidence 999998 678887
No 144
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=38.41 E-value=50 Score=36.52 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=47.0
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCC---cCceeeccC--chHHHHHHHHHHHcCcEEEEecCceeee
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEP---LRRQYDFTG--NLDLIRFIKTIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp---~~G~~df~g--~~dl~~fl~~a~~~gL~vilrpGPyica 123 (795)
+.-.+.++++++.||.+=.+.+-+....- ....|+|.- .-|..++++..++.|++|++..=|+|+.
T Consensus 29 ~~v~~~~~~~r~~~iP~d~i~ld~~~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~g~k~~~~i~P~i~~ 99 (317)
T cd06599 29 EALLEFIDKCREHDIPCDSFHLSSGYTSIEGGKRYVFNWNKDRFPDPAAFVAKFHERGIRLAPNIKPGLLQ 99 (317)
T ss_pred HHHHHHHHHHHHcCCCeeEEEEeccccccCCCceeeeecCcccCCCHHHHHHHHHHCCCEEEEEeCCcccC
Confidence 34567889999999986666654333222 123466642 2489999999999999999998888753
No 145
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=38.08 E-value=41 Score=37.21 Aligned_cols=73 Identities=8% Similarity=0.163 Sum_probs=51.8
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeee
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyica 123 (795)
+|..|. ..+..++.++++++.++..=.+.+-+.... ..+.|+|+-. -|..++++..++.|++|++..=|+|..
T Consensus 13 ~~~sr~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~-~~~~f~~d~~~FPdp~~~i~~l~~~g~k~~~~~~P~i~~ 90 (317)
T cd06600 13 YHISRYSYYPQDKVVEVVDIMQKEGFPYDVVFLDIHYMD-SYRLFTWDPYRFPEPKKLIDELHKRNVKLVTIVDPGIRV 90 (317)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHcCCCcceEEEChhhhC-CCCceeechhcCCCHHHHHHHHHHCCCEEEEEeeccccC
Confidence 344454 445567899999999987555554432222 3456666532 489999999999999999998888864
No 146
>PLN02784 alpha-amylase
Probab=37.82 E-value=64 Score=40.53 Aligned_cols=57 Identities=12% Similarity=0.193 Sum_probs=40.3
Q ss_pred HHHHHHHHHcCCCEEEecccccccCC---cCce-ee----ccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEP---LRRQ-YD----FTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp---~~G~-~d----f~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+++.-++++|+++|-+.=+.....+ .+.. |+ |....+|.++|+.|+++||+||+..
T Consensus 524 ~ekldyL~~LG~taIWLpP~~~s~s~~GY~p~D~y~lds~yGT~~ELk~LI~a~H~~GIkVIlDi 588 (894)
T PLN02784 524 GEKAAELSSLGFTVVWLPPPTESVSPEGYMPKDLYNLNSRYGTIDELKDLVKSFHEVGIKVLGDA 588 (894)
T ss_pred HHHHHHHHHhCCCEEEeCCCCCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHCCCEEEEEE
Confidence 36788889999999988644322211 1111 11 3445799999999999999999985
No 147
>COG1523 PulA Type II secretory pathway, pullulanase PulA and related glycosidases [Carbohydrate transport and metabolism]
Probab=37.79 E-value=50 Score=40.63 Aligned_cols=55 Identities=25% Similarity=0.366 Sum_probs=42.4
Q ss_pred HHHHHHHcCCCEEEe-cccccccCCcC---c-eeec----------------cC-----chHHHHHHHHHHHcCcEEEEe
Q 036343 63 LIKKAKEGGLDAIET-YVFWNAHEPLR---R-QYDF----------------TG-----NLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~-yv~Wn~hEp~~---G-~~df----------------~g-----~~dl~~fl~~a~~~gL~vilr 116 (795)
.|.-+|.+|+++|+. +|+.-..|+.. | .|+| ++ .+.+..+|+.++++||-|||.
T Consensus 205 ~i~yLk~LGvtaVeLLPV~~~~~~~~l~~~gl~n~WGYdP~~fFAp~~~Yss~p~p~~~i~EfK~mV~~lHkaGI~VILD 284 (697)
T COG1523 205 IIDYLKDLGVTAVELLPVFDFYDEPHLDKSGLNNNWGYDPLNFFAPEGRYASNPEPATRIKEFKDMVKALHKAGIEVILD 284 (697)
T ss_pred HHHHHHHhCCceEEEecceEEeccccccccccccccCCCcccccCCCccccCCCCcchHHHHHHHHHHHHHHcCCEEEEE
Confidence 489999999999998 68866666653 2 2222 23 357889999999999999998
Q ss_pred c
Q 036343 117 I 117 (795)
Q Consensus 117 p 117 (795)
-
T Consensus 285 V 285 (697)
T COG1523 285 V 285 (697)
T ss_pred E
Confidence 4
No 148
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=37.49 E-value=42 Score=36.07 Aligned_cols=65 Identities=15% Similarity=0.255 Sum_probs=49.3
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCcee--eccC--chHHHHHHHHHHHcCcEEEEecCcee
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQY--DFTG--NLDLIRFIKTIQDQGLYVILRIGPYV 121 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~--df~g--~~dl~~fl~~a~~~gL~vilrpGPyi 121 (795)
..+...+.++.+++.||..=.+.+-+...+. .+.| +|+- .-|..++++..++.|++|+|..=|+|
T Consensus 22 ~~~~v~~~~~~~~~~~iP~d~~~lD~~~~~~-~~~f~~~~d~~~Fpdp~~~i~~l~~~g~~~~~~~~P~v 90 (265)
T cd06589 22 DQDKVLEVIDGMRENDIPLDGFVLDDDYTDG-YGDFTFDWDAGKFPNPKSMIDELHDNGVKLVLWIDPYI 90 (265)
T ss_pred CHHHHHHHHHHHHHcCCCccEEEECcccccC-CceeeeecChhhCCCHHHHHHHHHHCCCEEEEEeChhH
Confidence 4556778899999999986666665554443 4556 4432 34899999999999999999988887
No 149
>KOG2024 consensus Beta-Glucuronidase GUSB (glycosylhydrolase superfamily 2) [Carbohydrate transport and metabolism]
Probab=35.53 E-value=46 Score=36.06 Aligned_cols=49 Identities=20% Similarity=0.289 Sum_probs=36.7
Q ss_pred CCCccEEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEE
Q 036343 433 NDVSDYLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDS 482 (795)
Q Consensus 433 ~~~~GYl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt 482 (795)
+|-+|.+||+.++.++.+... ..++...|++.++|-.|.|+|||.-+=.
T Consensus 84 rdfv~~~wyer~v~vpe~w~~-~~~~r~vlr~~s~H~~Aivwvng~~~~~ 132 (297)
T KOG2024|consen 84 RDFVGLVWYERTVTVPESWTQ-DLGKRVVLRIGSAHSYAIVWVNGVDALE 132 (297)
T ss_pred ccceeeeEEEEEEEcchhhhh-hcCCeEEEEeecccceeEEEEcceeecc
Confidence 467899999999988654311 1234568999999999999999876433
No 150
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=35.48 E-value=53 Score=36.66 Aligned_cols=74 Identities=18% Similarity=0.223 Sum_probs=51.6
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
+|..|. +.+..++.++++++.|+-.=.+.+-+.... .-+.|+|+-. -|..++++..++.|++|++..=|+|+.+
T Consensus 13 ~~~s~~~y~~~~~v~~~~~~~~~~~iP~d~i~lD~~~~~-~~~~f~~d~~~fPdp~~m~~~l~~~g~~~~~~~~P~v~~~ 91 (339)
T cd06604 13 YQQSRWSYYPEEEVREIADEFRERDIPCDAIYLDIDYMD-GYRVFTWDKERFPDPKELIKELHEQGFKVVTIIDPGVKVD 91 (339)
T ss_pred HHhcCCCCCCHHHHHHHHHHHHHhCCCcceEEECchhhC-CCCceeeccccCCCHHHHHHHHHHCCCEEEEEEeCceeCC
Confidence 455554 345567899999999987544444433332 3455666532 3789999999999999999988888643
No 151
>PF12876 Cellulase-like: Sugar-binding cellulase-like; InterPro: IPR024778 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This entry represents a family of putative cellulase enzymes.; PDB: 3GYC_B.
Probab=35.16 E-value=67 Score=28.48 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=23.2
Q ss_pred CCcEEEeecccc-cccccccC----Cc-ccHHHHHHHHHHhh---cCCCccce
Q 036343 175 GGPIILAQIENE-YGNVMSDY----GD-AGKSYINWCAKMAT---SLDIGVPW 218 (795)
Q Consensus 175 gGpII~~QiENE-yg~~~~~~----~~-~~~~y~~~l~~~~~---~~g~~vp~ 218 (795)
-..|.+|+|=|| -++....+ +. ....|.+||+++++ +.+...|+
T Consensus 8 ~~~Il~Wdl~NE~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~iR~~dP~~pv 60 (88)
T PF12876_consen 8 DPRILAWDLWNEPPNNWADGYPAEWGDPKAEAYAEWLKEAFRWIRAVDPSQPV 60 (88)
T ss_dssp GGGEEEEESSTTTT-TT-TT-TT-TT-TTSHHHHHHHHHHHHHHHTT-TTS-E
T ss_pred CCCEEEEEeecCCCCcccccccccccchhHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 357999999999 55321111 11 23566667666654 44445554
No 152
>COG3589 Uncharacterized conserved protein [Function unknown]
Probab=35.00 E-value=77 Score=35.54 Aligned_cols=72 Identities=24% Similarity=0.228 Sum_probs=56.1
Q ss_pred EEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCce-eeccCchHHHHHHHHHHHcCcEEEEecCceeeee
Q 036343 46 LSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQ-YDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAE 124 (795)
Q Consensus 46 ~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~-~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaE 124 (795)
++=++.+.|.+.+.=...|++|...|+..|- =++|.|++.. --|. -+.++++.|+++|++||+...|-|--|
T Consensus 4 ~GfSifp~~~~~~~~~~Yi~~~~~~Gf~~IF----tsl~~~~~~~~~~~~---~~~ell~~Anklg~~vivDvnPsil~~ 76 (360)
T COG3589 4 LGFSIFPNRSPKEKDIAYIDRMHKYGFKRIF----TSLLIPEEDAELYFH---RFKELLKEANKLGLRVIVDVNPSILKE 76 (360)
T ss_pred eeEEeccCCCcchhHHHHHHHHHHcCcccee----eecccCCchHHHHHH---HHHHHHHHHHhcCcEEEEEcCHHHHhh
Confidence 4556777788888778899999999998764 4667776542 2234 688889999999999999998877555
No 153
>TIGR00587 nfo apurinic endonuclease (APN1). All proteins in this family for which functions are known are 5' AP endonculeases that are used in base excision repair and the repair of abasic sites in DNA.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=34.80 E-value=2.8e+02 Score=29.86 Aligned_cols=83 Identities=12% Similarity=0.115 Sum_probs=52.0
Q ss_pred HHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE--EEecCceeeeeeCCCCcccccccCC
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYVCAEWNYGGFPVWLHNMP 138 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyicaEw~~GG~P~WL~~~p 138 (795)
.+.++.+++.|+++|++++-. |.--....-...+.++|.+.++++++.+ +.-=+||. +
T Consensus 14 ~~a~~~~~~~G~~~~qif~~~----P~~w~~~~~~~~~~~~~~~~~~~~~~~~~~i~~Hapy~------------i---- 73 (274)
T TIGR00587 14 QAAYNRAAEIGATAFMFFLKS----PRWWRRPMLEEEVIDWFKAALETNKNLSQIVLVHAPYL------------I---- 73 (274)
T ss_pred HHHHHHHHHhCCCEEEEEecC----ccccCCCCCCHHHHHHHHHHHHHcCCCCcceeccCCee------------e----
Confidence 568999999999999997641 1111111112337888888899998863 33335553 1
Q ss_pred CcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 139 GIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 139 ~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
- +-+.|+..+++..+.+.+.++.-+
T Consensus 74 --N-las~~~~~r~~sv~~~~~~i~~A~ 98 (274)
T TIGR00587 74 --N-LASPDEEKEEKSLDVLDEELKRCE 98 (274)
T ss_pred --e-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 345566677776666666666655
No 154
>PF02228 Gag_p19: Major core protein p19; InterPro: IPR003139 Retroviral matrix proteins (or major core proteins) are components of envelope-associated capsids, which line the inner surface of virus envelopes and are associated with viral membranes []. Matrix proteins are produced as part of Gag precursor polyproteins. During viral maturation, the Gag polyprotein is cleaved into major structural proteins by the viral protease, yielding the matrix (MA), capsid (CA), nucleocapsid (NC), and some smaller peptides. Gag-derived proteins govern the entire assembly and release of the virus particles, with matrix proteins playing key roles in Gag stability, capsid assembly, transport and budding. Although matrix proteins from different retroviruses appear to perform similar functions and can have similar structural folds, their primary sequences can be very different. This entry represents matrix proteins from delta-retroviruses such as Human T-lymphotropic virus 1 and Human T-cell leukemia virus 2 (HTLV-2), both members of the human oncovirus subclass of retroviruses [, ].; GO: 0005198 structural molecule activity, 0019013 viral nucleocapsid; PDB: 1JVR_A.
Probab=34.46 E-value=18 Score=31.90 Aligned_cols=37 Identities=22% Similarity=0.459 Sum_probs=26.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQ 109 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~ 109 (795)
....|-.-++.+-. .||.|..|||. +|.+||++|.|-
T Consensus 20 s~hhWLNflQaAyR--------------L~PgPS~~DF~---qLr~flk~alkT 56 (92)
T PF02228_consen 20 STHHWLNFLQAAYR--------------LQPGPSSFDFH---QLRNFLKLALKT 56 (92)
T ss_dssp THHHHHHHHHHHHH--------------SS---STTTHH---HHHHHHHHHHT-
T ss_pred CHHHHHHHHHHHHh--------------cCCCCCcccHH---HHHHHHHHHHcC
Confidence 34558777776655 48999999999 999999999874
No 155
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=33.81 E-value=63 Score=35.31 Aligned_cols=65 Identities=17% Similarity=0.247 Sum_probs=46.2
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccC--------CcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCce
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHE--------PLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPY 120 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hE--------p~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPy 120 (795)
+.+.-++.++++++.||-.=.+++-...|. ..-+.|.|+-. -|..++++..++.|++|++..=|+
T Consensus 23 s~~ev~~v~~~~r~~~iP~D~i~lD~dw~~~~~~~~~~~~~~~ft~d~~~FPdp~~mi~~Lh~~G~k~v~~v~P~ 97 (292)
T cd06595 23 SDEEYLALMDRFKKHNIPLDVLVIDMDWHVTDIPSKYGSGWTGYSWNRKLFPDPEKLLQDLHDRGLKVTLNLHPA 97 (292)
T ss_pred CHHHHHHHHHHHHHhCCCccEEEEecccccccccccccCCcceeEEChhcCCCHHHHHHHHHHCCCEEEEEeCCC
Confidence 445567899999999998665555433332 12356666532 489999999999999999886443
No 156
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=33.46 E-value=1.5e+02 Score=33.49 Aligned_cols=59 Identities=15% Similarity=0.199 Sum_probs=45.7
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc----ccccC----------------------------CcCceeeccCchHHHHHH
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF----WNAHE----------------------------PLRRQYDFTGNLDLIRFI 103 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~----Wn~hE----------------------------p~~G~~df~g~~dl~~fl 103 (795)
+.+..++.++.|...++|+...++. |.+-- +..|.|--+ |+.+++
T Consensus 16 ~~~~ik~~Id~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~---di~eiv 92 (357)
T cd06563 16 PVDEVKRFIDLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQE---EIREIV 92 (357)
T ss_pred CHHHHHHHHHHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHH---HHHHHH
Confidence 6788899999999999999998873 43221 112445444 999999
Q ss_pred HHHHHcCcEEEEec
Q 036343 104 KTIQDQGLYVILRI 117 (795)
Q Consensus 104 ~~a~~~gL~vilrp 117 (795)
+.|+++|+.||.-+
T Consensus 93 ~yA~~rgI~VIPEI 106 (357)
T cd06563 93 AYAAERGITVIPEI 106 (357)
T ss_pred HHHHHcCCEEEEec
Confidence 99999999999765
No 157
>PLN03059 beta-galactosidase; Provisional
Probab=33.42 E-value=1.6e+02 Score=37.00 Aligned_cols=41 Identities=24% Similarity=0.459 Sum_probs=31.3
Q ss_pred ccceEEEEEEEcCCCC-------CceEEEeCCce-eEEEEEcCeeecccc
Q 036343 589 RRMTWYKTTFEAPLEN-------DPVVLNLQGMG-KGFAWVNGYNLGRYW 630 (795)
Q Consensus 589 ~~p~~yk~~F~~p~~~-------dp~~Ld~~g~g-KG~vwVNG~nLGRYW 630 (795)
.+..||+++|+.+... .| .|.+.+.+ .-+|||||.-+|.-+
T Consensus 469 ~dYlwY~t~i~~~~~~~~~~~~~~~-~L~v~~~~d~~~vFVNg~~~Gt~~ 517 (840)
T PLN03059 469 TDYLWYMTEVHIDPDEGFLKTGQYP-VLTIFSAGHALHVFINGQLAGTVY 517 (840)
T ss_pred CceEEEEEEEeecCCccccccCCCc-eEEEcccCcEEEEEECCEEEEEEE
Confidence 4679999999986543 23 37777764 579999999999765
No 158
>PRK09856 fructoselysine 3-epimerase; Provisional
Probab=32.84 E-value=53 Score=34.91 Aligned_cols=61 Identities=18% Similarity=0.130 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHcCCCEEEecccccc-cCCcCceeeccCchHHHHHHHHHHHcCcEEEEec-Cce
Q 036343 59 MWPDLIKKAKEGGLDAIETYVFWNA-HEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI-GPY 120 (795)
Q Consensus 59 ~W~~~l~k~ka~G~N~V~~yv~Wn~-hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp-GPy 120 (795)
.+++.++.++++|..+|.+.-.... .+..+-.+... ...|.++.+.|+++|+.+.+-| +|+
T Consensus 91 ~~~~~i~~a~~lGa~~i~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~a~~~gv~l~iE~~~~~ 153 (275)
T PRK09856 91 MIKLAMDMAKEMNAGYTLISAAHAGYLTPPNVIWGRL-AENLSELCEYAENIGMDLILEPLTPY 153 (275)
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCCCCCCCHHHHHHHH-HHHHHHHHHHHHHcCCEEEEecCCCC
Confidence 4556788999999999966322111 11111122221 1368999999999999999887 443
No 159
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=32.57 E-value=1.2e+02 Score=33.68 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=44.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc--cccc---CC------------------------cCceeeccCchHHHHHHHHH
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF--WNAH---EP------------------------LRRQYDFTGNLDLIRFIKTI 106 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~--Wn~h---Ep------------------------~~G~~df~g~~dl~~fl~~a 106 (795)
+.+..++.|+.|...++|++..++- |.+- .| ..|.|-- .|+..+++.|
T Consensus 15 ~~~~ik~~id~ma~~K~N~lhlHltD~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~YT~---~di~eiv~yA 91 (326)
T cd06564 15 SMDFLKDIIKTMSWYKMNDLQLHLNDNLIFNLDDMSTTVNNATYASDDVKSGNNYYNLTANDGYYTK---EEFKELIAYA 91 (326)
T ss_pred CHHHHHHHHHHHHHcCCceEEEeecCCcccccCCCchhhhhhhhhccccccccccCCCCCCCCcccH---HHHHHHHHHH
Confidence 6788899999999999999998653 3221 11 1233333 4999999999
Q ss_pred HHcCcEEEEec
Q 036343 107 QDQGLYVILRI 117 (795)
Q Consensus 107 ~~~gL~vilrp 117 (795)
+++|+.||.-+
T Consensus 92 ~~rgI~vIPEI 102 (326)
T cd06564 92 KDRGVNIIPEI 102 (326)
T ss_pred HHcCCeEeccC
Confidence 99999998664
No 160
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=32.56 E-value=1.2e+02 Score=33.92 Aligned_cols=72 Identities=11% Similarity=0.168 Sum_probs=54.3
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceee
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVC 122 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyic 122 (795)
+|..|. ..++.++.++++++.+|-.=.+++-|..++ .-+.|.|+.. -|..++++..++.|+++++..=|+|.
T Consensus 13 ~~qsr~~Y~~~~ev~~v~~~~r~~~IP~D~i~lDidy~~-~~~~Ft~d~~~FPdp~~mv~~L~~~G~klv~~i~P~i~ 89 (332)
T cd06601 13 FHQGCYGYSNRSDLEEVVEGYRDNNIPLDGLHVDVDFQD-NYRTFTTNGGGFPNPKEMFDNLHNKGLKCSTNITPVIS 89 (332)
T ss_pred hhhCCCCCCCHHHHHHHHHHHHHcCCCCceEEEcCchhc-CCCceeecCCCCCCHHHHHHHHHHCCCeEEEEecCcee
Confidence 455554 456677889999999987666666655554 3466776543 47899999999999999998889987
No 161
>KOG0496 consensus Beta-galactosidase [Carbohydrate transport and metabolism]
Probab=32.04 E-value=14 Score=44.52 Aligned_cols=55 Identities=18% Similarity=0.158 Sum_probs=48.4
Q ss_pred CeeEeEEeeeecCCCCCCCCCcccccccCCCCchHHHHhhCCCCCccEEEecCCCc
Q 036343 721 GRRISEIKYASFGDPQGACGAFKKGSCEAEIDVLPLIEKQCVGKKSCSIEASEANL 776 (795)
Q Consensus 721 g~~I~~I~~A~YGr~~~~C~~~~~~~C~~~~~s~~~v~~~C~Gk~~C~v~as~~~f 776 (795)
+.++..|..|.||..+++|+.|....|-++ .+...+.+.|..+..|+++.-.+.+
T Consensus 335 ~lv~gd~~~~kyg~~~~~C~~Fl~n~~~~~-~~~v~f~~~~y~~~~~slsilpdck 389 (649)
T KOG0496|consen 335 ALVAGDITTAKYGNLREACAAFLSNNNGAP-AAPVPFNKPKYRLPPWSLSILPDCK 389 (649)
T ss_pred cccccCcccccccchhhHHHHHHhcCCCCC-CCccccCCCccccCceeEEechhhc
Confidence 777778899999999899999988899998 8888999999999999999865544
No 162
>PRK12858 tagatose 1,6-diphosphate aldolase; Reviewed
Probab=32.03 E-value=50 Score=37.17 Aligned_cols=65 Identities=14% Similarity=0.084 Sum_probs=44.8
Q ss_pred eeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 50 IHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 50 ~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
-++ |.+...=.-..+.++++|.++|.+.|+|.-.++. .-+-.-..+|.++.+.|+++||-+++-+
T Consensus 99 ~~g-r~~~~~~~~sve~a~~~GAdAVk~lv~~~~d~~~--~~~~~~~~~l~rv~~ec~~~giPlllE~ 163 (340)
T PRK12858 99 APG-RLPDLLDNWSVRRIKEAGADAVKLLLYYRPDEDD--AINDRKHAFVERVGAECRANDIPFFLEP 163 (340)
T ss_pred CCC-CCccccccccHHHHHHcCCCEEEEEEEeCCCcch--HHHHHHHHHHHHHHHHHHHcCCceEEEE
Confidence 344 5443332223678999999999999999954331 0011223489999999999999988853
No 163
>PF07691 PA14: PA14 domain; InterPro: IPR011658 The PA14 domain forms an insert in bacterial beta-glucosidases, other glycosidases, glycosyltransferases, proteases, amidases, yeast adhesins and bacterial toxins, including anthrax protective antigen (PA). The domain also occurs in a Dictyostelium pre-spore cell-inducing factor Psi and in fibrocystin, the mammalian protein whose mutation leads to polycystic kidney and hepatic disease. The crystal structure of PA shows that this domain (named PA14 after its location in the PA20 pro-peptide) has a beta-barrel structure. The PA14 domain sequence suggests a binding function, rather than a catalytic role. The PA14 domain distribution is compatible with carbohydrate binding [].; PDB: 2XVG_A 2XVK_A 2XVL_A 2XJU_A 2XJT_A 2XJQ_A 2XJS_A 2XJV_A 2XJP_A 2XJR_A ....
Probab=31.59 E-value=1.7e+02 Score=27.58 Aligned_cols=70 Identities=17% Similarity=0.265 Sum_probs=41.2
Q ss_pred EEEEEEeeCCCCCCccccCCCCceeeeCCcceEEEEEECCEEEEEEEcccC-----CCceeEeeeeeccCC-ccEEEEEE
Q 036343 438 YLWYMTNADLKDDDPILSGSSNMTLRINSSGQVLHAYVNGNYVDSQWTKYG-----ASNDLFERPVKLTRG-KNQISLLS 511 (795)
Q Consensus 438 Yl~Y~T~i~~~~~~~~~~~~~~~~L~i~~~~D~a~VfVng~~vGt~~~~~~-----~~~~~~~~~v~l~~g-~n~L~ILV 511 (795)
.+.++..|..+.++. -++.+. ..|.+.+||||+.+-...+... .........+.+.+| .+.|+|..
T Consensus 47 ~~~~~G~~~~~~~G~-------y~f~~~-~~d~~~l~idg~~vid~~~~~~~~~~~~~~~~~~~~v~l~~g~~y~i~i~y 118 (145)
T PF07691_consen 47 SVRWTGYFKPPETGT-------YTFSLT-SDDGARLWIDGKLVIDNWGNQGGGFFNSGPSSTSGTVTLEAGGKYPIRIEY 118 (145)
T ss_dssp EEEEEEEEEESSSEE-------EEEEEE-ESSEEEEEETTEEEEECSCTTTSTTTTTSBCCEEEEEEE-TT-EEEEEEEE
T ss_pred EEEEEEEEecccCce-------EEEEEE-ecccEEEEECCEEEEcCCccccccccccccceEEEEEEeeCCeeEEEEEEE
Confidence 456777777654431 234444 6789999999999876654221 001122334555554 67888876
Q ss_pred eecC
Q 036343 512 ATVG 515 (795)
Q Consensus 512 En~G 515 (795)
.+.+
T Consensus 119 ~~~~ 122 (145)
T PF07691_consen 119 FNRG 122 (145)
T ss_dssp EECS
T ss_pred EECC
Confidence 6655
No 164
>PRK08673 3-deoxy-7-phosphoheptulonate synthase; Reviewed
Probab=31.40 E-value=1.1e+02 Score=34.47 Aligned_cols=75 Identities=19% Similarity=0.380 Sum_probs=54.5
Q ss_pred EEECCeEEEEEEEEeeCCCC-CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccC--chHHHHHHHHHHHcCcE
Q 036343 36 ITIDGERKILLSGSIHYPRS-TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTG--NLDLIRFIKTIQDQGLY 112 (795)
Q Consensus 36 ~~idG~p~~~~sG~~hy~r~-~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g--~~dl~~fl~~a~~~gL~ 112 (795)
+.+.|.+++++.| +=-+ +++.-.+.-+.+|++|.+.++.|+|= |+---|.|.| ..-|.-+.+.+++.||.
T Consensus 87 ~~ig~~~~~~IAG---PCsiEs~e~~~~~A~~lk~~ga~~~r~~~fK----pRTsp~sf~G~g~~gL~~L~~~~~~~Gl~ 159 (335)
T PRK08673 87 VEIGGGKPVVIAG---PCSVESEEQILEIARAVKEAGAQILRGGAFK----PRTSPYSFQGLGEEGLKLLAEAREETGLP 159 (335)
T ss_pred EEECCCceEEEEe---cCccCCHHHHHHHHHHHHHhchhhccCcEec----CCCCCcccccccHHHHHHHHHHHHHcCCc
Confidence 6666778888888 2122 34455567778888999999999884 4444477875 56677777778999998
Q ss_pred EEEec
Q 036343 113 VILRI 117 (795)
Q Consensus 113 vilrp 117 (795)
++-.+
T Consensus 160 v~tev 164 (335)
T PRK08673 160 IVTEV 164 (335)
T ss_pred EEEee
Confidence 88765
No 165
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=31.17 E-value=76 Score=36.49 Aligned_cols=70 Identities=16% Similarity=0.293 Sum_probs=47.2
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCc--hHHHHHHHHHHHcCcEEEEecCceeeeeeC
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGN--LDLIRFIKTIQDQGLYVILRIGPYVCAEWN 126 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~--~dl~~fl~~a~~~gL~vilrpGPyicaEw~ 126 (795)
..+...+.++.+++.|+-.=.+.+-..... ..+.|.|+.. -|..++++.+++.|++|++..-|+|.-+-+
T Consensus 41 ~~~~v~~~i~~~~~~~iP~d~~~iD~~~~~-~~~~f~~d~~~FPd~~~~~~~l~~~G~~~~~~~~P~v~~~~~ 112 (441)
T PF01055_consen 41 NQDEVREVIDRYRSNGIPLDVIWIDDDYQD-GYGDFTWDPERFPDPKQMIDELHDQGIKVVLWVHPFVSNDSP 112 (441)
T ss_dssp SHHHHHHHHHHHHHTT--EEEEEE-GGGSB-TTBTT-B-TTTTTTHHHHHHHHHHTT-EEEEEEESEEETTTT
T ss_pred CHHHHHHHHHHHHHcCCCccceeccccccc-cccccccccccccchHHHHHhHhhCCcEEEEEeecccCCCCC
Confidence 345567899999999998766665533333 4445555432 389999999999999999999999876643
No 166
>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.
Probab=30.87 E-value=82 Score=34.53 Aligned_cols=59 Identities=17% Similarity=0.209 Sum_probs=43.6
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCC--cCc--eeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEP--LRR--QYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp--~~G--~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.++..++.++.+++.|.+.|-+|.-+..-.+ .++ .++-+ .+.+++++|+++|+.|.+..
T Consensus 118 ~~~~~~~~v~~~~~~G~~~iK~~~~g~~~~~~~~~~~~~~~~e---~l~~~~~~A~~~g~~v~~H~ 180 (342)
T cd01299 118 GVEEVRAAVREQLRRGADQIKIMATGGVLSPGDPPPDTQFSEE---ELRAIVDEAHKAGLYVAAHA 180 (342)
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeccCCcCCCCCCCcccCcCHH---HHHHHHHHHHHcCCEEEEEe
Confidence 3566788999999999999999985432111 122 23333 78999999999999988774
No 167
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=29.98 E-value=1.7e+02 Score=32.45 Aligned_cols=60 Identities=10% Similarity=0.113 Sum_probs=46.8
Q ss_pred CCCCChHHHHHHHHHcCCCEEEecc----cccccCC---c---Cc----eeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 55 STPGMWPDLIKKAKEGGLDAIETYV----FWNAHEP---L---RR----QYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 55 ~~~~~W~~~l~k~ka~G~N~V~~yv----~Wn~hEp---~---~G----~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.+.+..++.|+.|....+|+...++ .|-+--+ + .| .|.- .|+.++++.|++.|+.||.-+
T Consensus 15 ~~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g~~~~~yT~---~di~elv~yA~~rgI~vIPEI 88 (311)
T cd06570 15 IPVAVIKRQLDAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKASDGLYYTQ---EQIREVVAYARDRGIRVVPEI 88 (311)
T ss_pred cCHHHHHHHHHHHHHhCCeEEEEEEecCCCceeecCCCccccccCCCCCccCH---HHHHHHHHHHHHcCCEEEEee
Confidence 3688899999999999999999997 4754221 1 22 3333 499999999999999999765
No 168
>PRK13209 L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=29.95 E-value=2.7e+02 Score=29.70 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=56.5
Q ss_pred CCCChHHHHHHHHHcCCCEEEecc--cc--cccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYV--FW--NAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFP 131 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv--~W--n~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P 131 (795)
.++.-+...+.+++.|+..+.+-. +. +...+.+..-+ .....+.+.|++|++.|..+|.-+| .+
T Consensus 55 ~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~~~~~~~~~~r~-~~~~~~~~~i~~a~~lG~~~i~~~~-----------~~ 122 (283)
T PRK13209 55 SREQRLALVNALVETGFRVNSMCLSAHRRFPLGSEDDAVRA-QALEIMRKAIQLAQDLGIRVIQLAG-----------YD 122 (283)
T ss_pred CHHHHHHHHHHHHHcCCceeEEecccccccCCCCCCHHHHH-HHHHHHHHHHHHHHHcCCCEEEECC-----------cc
Confidence 455555667778899998766421 11 11111111100 0123688899999999998764321 12
Q ss_pred cccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccc
Q 036343 132 VWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYG 188 (795)
Q Consensus 132 ~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg 188 (795)
.|. ...++...+.....++.++++.+++ | |-+.+||-.+
T Consensus 123 ~~~---------~~~~~~~~~~~~~~l~~l~~~A~~~-------G--V~i~iE~~~~ 161 (283)
T PRK13209 123 VYY---------EQANNETRRRFIDGLKESVELASRA-------S--VTLAFEIMDT 161 (283)
T ss_pred ccc---------cccHHHHHHHHHHHHHHHHHHHHHh-------C--CEEEEeecCC
Confidence 221 1122444555666778887777743 3 4567888644
No 169
>COG1891 Uncharacterized protein conserved in archaea [Function unknown]
Probab=29.57 E-value=19 Score=36.57 Aligned_cols=65 Identities=25% Similarity=0.363 Sum_probs=45.2
Q ss_pred EEEEEEeeCCCC---CCCChHHHHHHHHHcCCCEEEecccccccCCcCc--eeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 44 ILLSGSIHYPRS---TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRR--QYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 44 ~~~sG~~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G--~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
..-+|--.|.|+ .|-.-+ +-+.++|.+.+-+--. -+.| -|||-...+|..|+++|+++||.+-|.
T Consensus 117 VVAaGYaDa~Rvgsv~Pl~~P---~vaa~ag~DvaMvDTa-----iKDGkslFdfm~~e~l~eFvd~Ah~hGL~~AlA 186 (235)
T COG1891 117 VVAAGYADAHRVGSVSPLLLP---EVAAEAGADVAMVDTA-----IKDGKSLFDFMDEEELEEFVDLAHEHGLEVALA 186 (235)
T ss_pred EEeccccchhhccCcCccccH---HHHHhcCCCEEEEecc-----cccchhHHhhhcHHHHHHHHHHHHHcchHHHhc
Confidence 445666677785 444444 3567788886544211 1344 599988899999999999999988665
No 170
>PRK09432 metF 5,10-methylenetetrahydrofolate reductase; Provisional
Probab=29.04 E-value=94 Score=34.23 Aligned_cols=89 Identities=18% Similarity=0.285 Sum_probs=58.9
Q ss_pred HHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcE--EEEecCcee-------eeeeCCCCcccc
Q 036343 63 LIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLY--VILRIGPYV-------CAEWNYGGFPVW 133 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~--vilrpGPyi-------caEw~~GG~P~W 133 (795)
+|++-.++|.+.+-|-.+ ||.+ .+.+|++.+++.|+. |+...-|-. -++...-.+|.|
T Consensus 168 ~Lk~K~~aGA~~~iTQ~~----------Fd~~---~~~~f~~~~~~~Gi~vPIi~GI~pi~s~~~~~~~~~~~Gv~vP~~ 234 (296)
T PRK09432 168 NLKRKVDAGANRAITQFF----------FDVE---SYLRFRDRCVSAGIDVEIVPGILPVSNFKQLKKFADMTNVRIPAW 234 (296)
T ss_pred HHHHHHHcCCCeeecccc----------cchH---HHHHHHHHHHHcCCCCCEEeeccccCCHHHHHHHHHccCCCCCHH
Confidence 455555788888887655 4555 899999999999955 555554432 156667788999
Q ss_pred cccCCCcccccCCC-hhHHHHHHHHHHHHHHHHHh
Q 036343 134 LHNMPGIEELRTTN-KVFMNEMQNFTTLIVDMAKK 167 (795)
Q Consensus 134 L~~~p~~~~~R~~d-~~y~~~~~~~~~~l~~~~~~ 167 (795)
+.+.=+- . .+| ...+++--++..++++.|.+
T Consensus 235 l~~~l~~--~-~d~~~~~~~~Gi~~a~e~i~~L~~ 266 (296)
T PRK09432 235 MAKMFDG--L-DDDAETRKLVGASIAMDMVKILSR 266 (296)
T ss_pred HHHHHHh--c-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9752110 1 133 34566777788888888773
No 171
>PLN02389 biotin synthase
Probab=28.89 E-value=76 Score=36.25 Aligned_cols=51 Identities=16% Similarity=0.224 Sum_probs=34.8
Q ss_pred hHHHHHHHHHcCCCEEEeccc--ccccCCcCceeeccCchHHHHHHHHHHHcCcEE
Q 036343 60 WPDLIKKAKEGGLDAIETYVF--WNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV 113 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~~yv~--Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v 113 (795)
=++.++++|++|++.+..-+- -..+...-..-+|+ +.-+.++.|++.||.|
T Consensus 177 ~~E~l~~LkeAGld~~~~~LeTs~~~y~~i~~~~s~e---~rl~ti~~a~~~Gi~v 229 (379)
T PLN02389 177 EKEQAAQLKEAGLTAYNHNLDTSREYYPNVITTRSYD---DRLETLEAVREAGISV 229 (379)
T ss_pred CHHHHHHHHHcCCCEEEeeecCChHHhCCcCCCCCHH---HHHHHHHHHHHcCCeE
Confidence 468999999999998766322 22222221222565 6778899999999986
No 172
>PF08924 DUF1906: Domain of unknown function (DUF1906); InterPro: IPR015020 This entry represents a family of uncharacterised hypothetical bacterial proteins. ; PDB: 1SFS_A.
Probab=28.72 E-value=1.6e+02 Score=28.55 Aligned_cols=92 Identities=11% Similarity=0.125 Sum_probs=47.1
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeecc-CchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccc
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFT-GNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWL 134 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~-g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL 134 (795)
.+.+.+..++.|+++|+..+-+|.....+. ......++ |..|=..-+..|+++|+. . |-|-++
T Consensus 36 ~k~Lt~~e~~~i~~~Gl~i~pIyq~~~~~~-~~~~~~~~~G~~dA~~A~~~A~~lG~p----~-----------gt~IYf 99 (136)
T PF08924_consen 36 QKNLTAGEVQDIRAAGLRIFPIYQGGGRET-SDFTYGYAQGVADARDAVAAARALGFP----A-----------GTPIYF 99 (136)
T ss_dssp --B--HHHHHHHHHTT-EEEEEE---------S-B--HHHHHHHHHHHHHHHHHTT------S-----------S-EEEE
T ss_pred cCCCCHHHHHHHHHCCCEEEEEEecccccc-cccccHHHHHHHHHHHHHHHHHHcCCC----C-----------CCEEEE
Confidence 467889999999999999999998872211 11122222 668888999999999983 2 344444
Q ss_pred ccCCCcccccCCChhHHHHHHHHHHHHHHHHHhc
Q 036343 135 HNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKE 168 (795)
Q Consensus 135 ~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~ 168 (795)
.-+ .-..+..+.+.+..||+.+.+.|..+
T Consensus 100 avD-----~d~~~~~~~~~i~~Y~~g~~~~l~~~ 128 (136)
T PF08924_consen 100 AVD-----YDATDAECDSAILPYFRGWNSALGAS 128 (136)
T ss_dssp E-------TS-B-HH-------HHHHHHHHHGGG
T ss_pred Eee-----cCCCchhhhhHHHHHHHHHHHHHhhC
Confidence 322 12346677788888888888888743
No 173
>PTZ00372 endonuclease 4-like protein; Provisional
Probab=28.48 E-value=3.6e+02 Score=31.28 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCEEEeccc----ccccCCcCceeeccCchHHHHHHHHHHHcCcEE--EEecCcee
Q 036343 61 PDLIKKAKEGGLDAIETYVF----WNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV--ILRIGPYV 121 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~----Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v--ilrpGPyi 121 (795)
...++.+.+.|.|++++++- |..-+..+ .++++|.++++++||.+ ++-=+||.
T Consensus 144 ~~a~~~a~~~g~~afqiF~~npr~w~~~~~~~--------~~~~~f~~~~~~~gi~~~~i~~HapYl 202 (413)
T PTZ00372 144 DNSPINAYNIAGQAFALFLKNQRTWNSPPLSD--------ETIDKFKENCKKYNYDPKFILPHGSYL 202 (413)
T ss_pred HHHHHHHHHcCCCEEEEEcCCCccCCCCCCCH--------HHHHHHHHHHHHcCCCcceEEeecCce
Confidence 34788999999999999974 65444332 38999999999998852 33346663
No 174
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=28.41 E-value=76 Score=35.09 Aligned_cols=59 Identities=15% Similarity=0.207 Sum_probs=42.7
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc----ccccCC------cCc---------eeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF----WNAHEP------LRR---------QYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~----Wn~hEp------~~G---------~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
+.+.-++.|+.|...++|++..++. |.+.-+ +.| .|--+ |+.++++.|++.||.||.-
T Consensus 16 ~~~~ik~~id~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga~~~~~~~~~yT~~---di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 16 SVDTIKRLIDQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGAYRPSDAGGYYTKE---DIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp -HHHHHHHHHHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTTESTTCTESEBEHH---HHHHHHHHHHHTT-EEEEE
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEEecCCCCccccCCCccccccCccccccccccCCHH---HHHHHHHHHHHcCCceeee
Confidence 6677889999999999999999985 444321 123 34444 9999999999999999976
Q ss_pred c
Q 036343 117 I 117 (795)
Q Consensus 117 p 117 (795)
+
T Consensus 93 i 93 (351)
T PF00728_consen 93 I 93 (351)
T ss_dssp E
T ss_pred c
Confidence 4
No 175
>PF01120 Alpha_L_fucos: Alpha-L-fucosidase; InterPro: IPR000933 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Family 29 (GH29 from CAZY) encompasses alpha-L-fucosidases (3.2.1.51 from EC) [], which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Alpha-L-fucosidase is responsible for hydrolysing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Fucosylated glycoconjugates are involved in numerous biological events, making alpha-l-fucosidases, the enzymes responsible for their processing, critically important. Deficiency in alpha-l-fucosidase activity is associated with fucosidosis, a lysosomal storage disorder characterised by rapid neurodegeneration, resulting in severe mental and motor deterioration []. The enzyme is a hexamer and displays a two-domain fold, composed of a catalytic (beta/alpha)(8)-like domain and a C-terminal beta-sandwich domain []. Drosophila melanogaster spermatozoa contains an alpha-l-fucosidase that might be involved in fertilisation by interacting with alpha-l-fucose residues on the micropyle of the eggshell []. In human sperm, membrane-associated alpha-l-fucosidase is stable for extended periods of time, which is made possible by membrane domains and compartmentalisation. These help preserve protein integrity []. ; GO: 0004560 alpha-L-fucosidase activity, 0005975 carbohydrate metabolic process; PDB: 3EYP_B 2ZX6_A 2ZWY_B 2ZX8_B 2WSP_A 2ZXA_A 2ZWZ_B 1ODU_B 1HL9_A 2ZX5_B ....
Probab=28.33 E-value=8.8e+02 Score=27.15 Aligned_cols=230 Identities=14% Similarity=0.103 Sum_probs=99.7
Q ss_pred HHHHHHHHcCCCEEEe-------cccccccCCcCceeeccCch-HHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccc
Q 036343 62 DLIKKAKEGGLDAIET-------YVFWNAHEPLRRQYDFTGNL-DLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVW 133 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~-------yv~Wn~hEp~~G~~df~g~~-dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~W 133 (795)
+-.+.+|++|+.-|-. +-.|.-.-..-..-+-.+.+ -+.+|.+.|+++||++-|=-.| ++|.....+.-
T Consensus 95 qW~~~ak~aGakY~VlTakHHDGF~LW~S~~t~~~v~~~~~krDiv~El~~A~rk~Glk~G~Y~S~---~dw~~~~~~~~ 171 (346)
T PF01120_consen 95 QWAKLAKDAGAKYVVLTAKHHDGFCLWPSKYTDYNVVNSGPKRDIVGELADACRKYGLKFGLYYSP---WDWHHPDYPPD 171 (346)
T ss_dssp HHHHHHHHTT-SEEEEEEE-TT--BSS--TT-SSBGGGGGGTS-HHHHHHHHHHHTT-EEEEEEES---SSCCCTTTTSS
T ss_pred HHHHHHHHcCCCEEEeehhhcCccccCCCCCCcccccCCCCCCCHHHHHHHHHHHcCCeEEEEecc---hHhcCcccCCC
Confidence 3467899999995532 22254433222222222223 4678999999999987663322 24543222221
Q ss_pred cccCCCcccccCCChhHHHHHH-HHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcccHHHHHHHHHHhhcC
Q 036343 134 LHNMPGIEELRTTNKVFMNEMQ-NFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATSL 212 (795)
Q Consensus 134 L~~~p~~~~~R~~d~~y~~~~~-~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~~ 212 (795)
....... .....+.+.+.++ .++..|-+.+.+++. -+|=+-..... ....--...+.+++++.
T Consensus 172 ~~~~~~~--~~~~~~~~~~~~~~~~~~ql~EL~~~Y~~------d~lWfDg~~~~--------~~~~~~~~~~~~~i~~~ 235 (346)
T PF01120_consen 172 EEGDENG--PADGPGNWQRYYNEYWLAQLRELLTRYKP------DILWFDGGWPD--------PDEDWDSAELYNWIRKL 235 (346)
T ss_dssp CHCHHCC----HCCHHHHHHHHHHHHHHHHHHHHCSTE------SEEEEESTTSC--------CCTHHHHHHHHHHHHHH
T ss_pred ccCCccc--ccccchhhHhHhhhhhHHHHHHHHhCCCc------ceEEecCCCCc--------cccccCHHHHHHHHHHh
Confidence 1110000 0112334445555 455555555554321 12211111110 01122235666666665
Q ss_pred CCccceeeeCCCCCCC--CC--CCCCCCCC--CceecccccccccccCC---CCCCCCHHHHHHHHHHHHHcCCeeeeee
Q 036343 213 DIGVPWIMCQESDAPS--PM--FTPNNPNS--PKIWTENWTGWFKSWGG---KDPKRTAEDLAFAVARFFQFGGTFQNYY 283 (795)
Q Consensus 213 g~~vp~~~~~~~~~~~--~~--f~~~~~~~--P~~~~E~~~Gwf~~WG~---~~~~~~~~~~~~~~~~~l~~g~s~~n~Y 283 (795)
.-++.+....+..... .+ +....+.. +..| |-=..--..||- ....++++++...+.+..++|++++
T Consensus 236 qp~~ii~~r~~~~~~~~~d~~~~E~~~~~~~~~~pw-E~~~ti~~~W~y~~~~~~~ks~~~li~~l~~~vs~ngnlL--- 311 (346)
T PF01120_consen 236 QPDVIINNRWGGNEQGDGDYNTPERGIPGEIQGRPW-ETCTTIGPSWGYNTPDEKYKSADELIDILVDSVSRNGNLL--- 311 (346)
T ss_dssp STTSEEECCCSSCSSCCBSCCEECTTBTTTEEESEE-EEEEESSSSSS-CGGGCGS--HHHHHHHHHHHHTBTEEEE---
T ss_pred CCeEEEecccCCCCCccccccchhccCCCCCCCCCc-cccCcCCCCCcccCCCCCcCCHHHHHHHHHHHhccCceEE---
Confidence 5444332211111110 11 11111111 1111 110011133443 2345788899988888888887642
Q ss_pred eeeccCCCCCCCCCCCccccccCCCCCCcCCCCCChhHHHHHHHHHHHHhhhc
Q 036343 284 MYHGGTNFGRTSGGPYLTTSYDYDAPIDEYGHLNQPKWGHLRELHKLLKSMEK 336 (795)
Q Consensus 284 M~hGGTNfG~~~G~~~~~TSYDYdApl~E~G~~~tpKy~~lr~l~~~l~~~~~ 336 (795)
+ | -+.+.+|.+..+.-..||++...++...+
T Consensus 312 L----------N------------igP~~dG~ip~~~~~~L~e~G~Wl~~nge 342 (346)
T PF01120_consen 312 L----------N------------IGPDPDGTIPEEQVERLREIGDWLKVNGE 342 (346)
T ss_dssp E----------E------------E---TTSS--HHHHHHHHHHHHHHHHHGG
T ss_pred E----------e------------cCCCCCCCcCHHHHHHHHHHHHHHHhccc
Confidence 2 2 23346788777788889999988876544
No 176
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=28.27 E-value=87 Score=35.11 Aligned_cols=74 Identities=15% Similarity=0.194 Sum_probs=49.6
Q ss_pred eeCCCC---CCCChHHHHHHHHHcCCCEEEecc----------cccccCCc---------CceeeccC---chHHHHHHH
Q 036343 50 IHYPRS---TPGMWPDLIKKAKEGGLDAIETYV----------FWNAHEPL---------RRQYDFTG---NLDLIRFIK 104 (795)
Q Consensus 50 ~hy~r~---~~~~W~~~l~k~ka~G~N~V~~yv----------~Wn~hEp~---------~G~~df~g---~~dl~~fl~ 104 (795)
+|..|. ..+.-++.++++++.||..=.+++ .|+-..-. -+.++|.. .-|.+++|+
T Consensus 13 ~~~sr~~Y~~~~ev~~v~~~~~~~~iP~d~i~lD~W~~~~~~~~w~d~~y~~~~~~~~~~~~~~~f~~~~~FPdp~~mi~ 92 (340)
T cd06597 13 LWMSANEWDTQAEVMRQMDAHEEHGIPVTVVVIEQWSDEATFYVFNDAQYTPKDGGAPLSYDDFSFPVEGRWPNPKGMID 92 (340)
T ss_pred hhhhccCCCCHHHHHHHHHHHHHcCCCeeEEEEecccCcceeeeeccchhcccccCCcceecccccCccccCCCHHHHHH
Confidence 455554 344567889999999998665554 24422211 12333431 127999999
Q ss_pred HHHHcCcEEEEecCceeee
Q 036343 105 TIQDQGLYVILRIGPYVCA 123 (795)
Q Consensus 105 ~a~~~gL~vilrpGPyica 123 (795)
..++.|++|+|..=|+|..
T Consensus 93 ~Lh~~G~kv~l~v~P~i~~ 111 (340)
T cd06597 93 ELHEQGVKVLLWQIPIIKL 111 (340)
T ss_pred HHHHCCCEEEEEecCcccc
Confidence 9999999999998888853
No 177
>PRK08645 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; Reviewed
Probab=28.19 E-value=1.6e+02 Score=35.72 Aligned_cols=110 Identities=14% Similarity=0.156 Sum_probs=75.6
Q ss_pred eEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCce
Q 036343 41 ERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPY 120 (795)
Q Consensus 41 ~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPy 120 (795)
++-+.+++..|+.+.+.+.=-++|++-.++|...+-|-.+++. + .+.+|++.+++.++.+|...-|.
T Consensus 461 ~~~f~ig~A~~P~~~~~~~d~~~L~~Ki~aGAdf~iTQ~~fd~----------~---~~~~~~~~~~~~~vpIi~GImPi 527 (612)
T PRK08645 461 KTNFSIGGAFNPNVRNLDKEVKRLEKKIEAGADYFITQPVYDE----------E---LIEELLEATKHLGVPIFIGIMPL 527 (612)
T ss_pred CCceeeeEEeCCCCCChHHHHHHHHHHHHcCCCEEEecccCCH----------H---HHHHHHHHHhcCCCCEEEEeeec
Confidence 4457889999877665554446677777899999999887654 3 78888988887788888777664
Q ss_pred eee--------eeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHH
Q 036343 121 VCA--------EWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAK 166 (795)
Q Consensus 121 ica--------Ew~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~ 166 (795)
... +|..-=+|.|+.+. +.... +...++++-.++..++++.+.
T Consensus 528 ~s~k~~~~~~~~~~Gv~vP~~l~~~--l~~~~-d~~~~~~~gv~~a~e~i~~l~ 578 (612)
T PRK08645 528 VSYRNAEFLHNEVPGITLPEEIRER--MRAVE-DKEEAREEGVAIARELIDAAR 578 (612)
T ss_pred CCHHHHHHHHhCCCCCCCCHHHHHH--HHhcC-CchHHHHHHHHHHHHHHHHHH
Confidence 433 24444468888641 11012 224677778888888888777
No 178
>PRK01060 endonuclease IV; Provisional
Probab=27.93 E-value=2.2e+02 Score=30.32 Aligned_cols=55 Identities=15% Similarity=0.190 Sum_probs=36.3
Q ss_pred HHHHHHHcCCCE----EEecccccccCCcCceeeccCchHHHHHHHHHHHcCcE-EEEecC
Q 036343 63 LIKKAKEGGLDA----IETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLY-VILRIG 118 (795)
Q Consensus 63 ~l~k~ka~G~N~----V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~-vilrpG 118 (795)
.-+++++.|+.. +......|+-.|.|...+.+ ...+.+.+++|++.|-. |++.||
T Consensus 52 lk~~~~~~gl~~~~~~~h~~~~~nl~~~d~~~r~~s-~~~~~~~i~~A~~lga~~vv~h~G 111 (281)
T PRK01060 52 FKAACEKYGISPEDILVHAPYLINLGNPNKEILEKS-RDFLIQEIERCAALGAKLLVFHPG 111 (281)
T ss_pred HHHHHHHcCCCCCceEEecceEecCCCCCHHHHHHH-HHHHHHHHHHHHHcCCCEEEEcCC
Confidence 334566788873 22222356777766555554 34789999999999997 567766
No 179
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=27.90 E-value=2.3e+02 Score=31.82 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=46.6
Q ss_pred CCCChHHHHHHHHHcCCCEEEeccc----ccccCCc------Cc------eeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVF----WNAHEPL------RR------QYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~----Wn~hEp~------~G------~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.+..++.++.|....+|+...++- |.+--+. .| .|-- .|+..+++.|++.|+.||.-+
T Consensus 16 ~~~~ik~~Id~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~ga~~~~~~YT~---~di~eiv~yA~~rgI~vIPEI 90 (348)
T cd06562 16 SVDSIKRTIDAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKGAYSPSEVYTP---EDVKEIVEYARLRGIRVIPEI 90 (348)
T ss_pred CHHHHHHHHHHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhccCcCCCceECH---HHHHHHHHHHHHcCCEEEEec
Confidence 6788899999999999999998863 6554331 23 3444 499999999999999999765
No 180
>COG1082 IolE Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]
Probab=27.73 E-value=6.7e+02 Score=26.18 Aligned_cols=51 Identities=20% Similarity=0.244 Sum_probs=38.2
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
...-+++.+++++++|+..|+..- .+.+..+ ..+++++.++++++||.+..
T Consensus 13 ~~~~l~~~l~~~~~~G~~gvEi~~--------~~~~~~~-~~~~~~l~~~l~~~gl~i~~ 63 (274)
T COG1082 13 GELPLEEILRKAAELGFDGVELSP--------GDLFPAD-YKELAELKELLADYGLEITS 63 (274)
T ss_pred CCCCHHHHHHHHHHhCCCeEecCC--------cccCCch-hhhHHHHHHHHHHcCcEEEe
Confidence 456688999999999999999876 1222221 11389999999999999765
No 181
>PF08531 Bac_rhamnosid_N: Alpha-L-rhamnosidase N-terminal domain; InterPro: IPR013737 This domain is found in bacterial rhamnosidase A and B enzymes and is probably involved in substrate recognition. ; PDB: 2OKX_B.
Probab=27.61 E-value=1.1e+02 Score=30.68 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=30.2
Q ss_pred ceeeeCCcceEEEEEECCEEEEEEEcc--cC--CCc---eeEeeeeeccCCccEEEEEEeecC
Q 036343 460 MTLRINSSGQVLHAYVNGNYVDSQWTK--YG--ASN---DLFERPVKLTRGKNQISLLSATVG 515 (795)
Q Consensus 460 ~~L~i~~~~D~a~VfVng~~vGt~~~~--~~--~~~---~~~~~~v~l~~g~n~L~ILVEn~G 515 (795)
..|.|... .+-.+||||+.||...-. .. ... .++.+.--|+.|.|+|.+++-+-.
T Consensus 6 A~l~isa~-g~Y~l~vNG~~V~~~~l~P~~t~y~~~~~Y~tyDVt~~L~~G~N~iav~lg~gw 67 (172)
T PF08531_consen 6 ARLYISAL-GRYELYVNGERVGDGPLAPGWTDYDKRVYYQTYDVTPYLRPGENVIAVWLGNGW 67 (172)
T ss_dssp -EEEEEEE-SEEEEEETTEEEEEE--------BTTEEEEEEEE-TTT--TTEEEEEEEEEE--
T ss_pred EEEEEEeC-eeEEEEECCEEeeCCccccccccCCCceEEEEEeChHHhCCCCCEEEEEEeCCc
Confidence 45666543 366899999999875410 11 111 223333347889999999997744
No 182
>PRK07094 biotin synthase; Provisional
Probab=26.97 E-value=63 Score=35.53 Aligned_cols=50 Identities=22% Similarity=0.163 Sum_probs=35.3
Q ss_pred HHHHHHHHHcCCCEEEeccc---ccccCCcCceeeccCchHHHHHHHHHHHcCcEE
Q 036343 61 PDLIKKAKEGGLDAIETYVF---WNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV 113 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~---Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v 113 (795)
++.+++||++|++.|.+.+- -..++.......++ +..+.++.++++|+.|
T Consensus 129 ~e~l~~Lk~aG~~~v~~glEs~~~~~~~~i~~~~s~~---~~~~~i~~l~~~Gi~v 181 (323)
T PRK07094 129 YEEYKAWKEAGADRYLLRHETADKELYAKLHPGMSFE---NRIACLKDLKELGYEV 181 (323)
T ss_pred HHHHHHHHHcCCCEEEeccccCCHHHHHHhCCCCCHH---HHHHHHHHHHHcCCee
Confidence 57889999999999886553 23333322345565 7888899999999864
No 183
>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains. Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=26.91 E-value=1.2e+02 Score=24.35 Aligned_cols=55 Identities=18% Similarity=0.360 Sum_probs=39.5
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV 113 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v 113 (795)
|..-.+.+.-+.+.|+|.+.++. +...+.....+-|.-+ +.++.++..+++|..|
T Consensus 10 pG~L~~i~~~l~~~~~nI~~i~~-~~~~~~~~~~v~~~ve-~~~~~~~~L~~~G~~v 64 (65)
T cd04882 10 PGGLHEILQILSEEGINIEYMYA-FVEKKGGKALLIFRTE-DIEKAIEVLQERGVEL 64 (65)
T ss_pred CcHHHHHHHHHHHCCCChhheEE-EccCCCCeEEEEEEeC-CHHHHHHHHHHCCceE
Confidence 44456788889999999998886 3333334555655533 4889999999999765
No 184
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=26.84 E-value=86 Score=37.35 Aligned_cols=74 Identities=26% Similarity=0.512 Sum_probs=51.7
Q ss_pred ECCeEEEEEEEEee--CCC-CCCCChHHHHHHHHHcCCCEEEecccccccCCc---------CceeeccCchHHHHHHHH
Q 036343 38 IDGERKILLSGSIH--YPR-STPGMWPDLIKKAKEGGLDAIETYVFWNAHEPL---------RRQYDFTGNLDLIRFIKT 105 (795)
Q Consensus 38 idG~p~~~~sG~~h--y~r-~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~---------~G~~df~g~~dl~~fl~~ 105 (795)
.+|+| .+++|.+- |-| |.+++-++.+++++.+|+| +|+. -|+ +--|+-+-..-|..+|..
T Consensus 11 A~g~r-~fiCGVvEGFYGRPWt~EQRK~LFrrl~~~gl~---tYlY----APKDDyKHR~~WRElY~vEEa~~L~~Li~a 82 (891)
T KOG3698|consen 11 AVGNR-KFICGVVEGFYGRPWTPEQRKHLFRRLNQLGLT---TYLY----APKDDYKHRSLWRELYNVEEATYLRNLIEA 82 (891)
T ss_pred ccccc-eeEEEeeccccCCCCCHHHHHHHHHHHHhcccc---eeee----cccchhHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34444 34678776 777 6999999999999999999 5543 111 123444444578889999
Q ss_pred HHHcCcEEEEecCc
Q 036343 106 IQDQGLYVILRIGP 119 (795)
Q Consensus 106 a~~~gL~vilrpGP 119 (795)
|+++++..+-.+.|
T Consensus 83 Ake~~i~F~YAiSP 96 (891)
T KOG3698|consen 83 AKENNINFVYAISP 96 (891)
T ss_pred HHhcCceEEEEcCC
Confidence 99999997755443
No 185
>PRK13210 putative L-xylulose 5-phosphate 3-epimerase; Reviewed
Probab=26.55 E-value=84 Score=33.45 Aligned_cols=60 Identities=12% Similarity=0.008 Sum_probs=38.3
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcC-ceeeccCchHHHHHHHHHHHcCcEEEEecC
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLR-RQYDFTGNLDLIRFIKTIQDQGLYVILRIG 118 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~-G~~df~g~~dl~~fl~~a~~~gL~vilrpG 118 (795)
+++++.++.++++|.+.|.+.-.-...++.. -.++. -...|.+++++|+++|+.+.+-+-
T Consensus 94 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~a~~~gv~l~lE~~ 154 (284)
T PRK13210 94 EIMKKAIRLAQDLGIRTIQLAGYDVYYEEKSEETRQR-FIEGLAWAVEQAAAAQVMLAVEIM 154 (284)
T ss_pred HHHHHHHHHHHHhCCCEEEECCcccccccccHHHHHH-HHHHHHHHHHHHHHhCCEEEEEec
Confidence 4467889999999999998631100011111 11111 114688889999999999988873
No 186
>cd00544 CobU Adenosylcobinamide kinase / adenosylcobinamide phosphate guanyltransferase (CobU). CobU is bifunctional cobalbumin biosynthesis enzymes which display adenosylcobinamide kinase and adenosylcobinamide phosphate guanyltransferase activity. This enzyme is a homotrimer with a propeller-like shape.
Probab=26.48 E-value=4.2e+02 Score=26.57 Aligned_cols=50 Identities=14% Similarity=0.270 Sum_probs=32.9
Q ss_pred HHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCCcccHHHHHHHHHHhhc
Q 036343 154 MQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYGDAGKSYINWCAKMATS 211 (795)
Q Consensus 154 ~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~~~~~~y~~~l~~~~~~ 211 (795)
+.+-+.+++..++ ..+.++|.| .||-|+-.-++.+..+.|++.|-.+-+.
T Consensus 101 ~~~~i~~l~~~l~------~~~~~~viV--snEvG~g~vp~~~~~r~f~d~lG~lnq~ 150 (169)
T cd00544 101 IADEIDALLAAVR------NKPGTLILV--SNEVGLGVVPENALGRRFRDELGRLNQR 150 (169)
T ss_pred HHHHHHHHHHHHH------cCCCcEEEE--ECCcCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3445556666666 245678877 5999974333556778999888776554
No 187
>PRK09997 hydroxypyruvate isomerase; Provisional
Probab=26.31 E-value=82 Score=33.34 Aligned_cols=60 Identities=13% Similarity=-0.004 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+..++.++.++++|..+|.+...+.--...+.+..-.-...|.++.++|+++|+.+.+-|
T Consensus 85 ~~~~~~i~~a~~lga~~i~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~ 144 (258)
T PRK09997 85 DGVAAAIRYARALGNKKINCLVGKTPAGFSSEQIHATLVENLRYAANMLMKEDILLLIEP 144 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 336778889999999999875433211111112111112467888899999999999987
No 188
>TIGR01698 PUNP purine nucleotide phosphorylase. methylthioadenosine.
Probab=25.84 E-value=89 Score=33.44 Aligned_cols=39 Identities=15% Similarity=0.254 Sum_probs=31.1
Q ss_pred EECCeEEEEEEEEeeCCCCC-CCChHHHHHHHHHcCCCEE
Q 036343 37 TIDGERKILLSGSIHYPRST-PGMWPDLIKKAKEGGLDAI 75 (795)
Q Consensus 37 ~idG~p~~~~sG~~hy~r~~-~~~W~~~l~k~ka~G~N~V 75 (795)
.+.|+++..++|..|+...+ ..+-+--++.||++|+..|
T Consensus 47 ~l~g~~V~~l~Gr~H~yeg~~~~~v~~~i~al~~lGv~~i 86 (237)
T TIGR01698 47 RIGDGPVLVLGGRTHAYEGGDARAVVHPVRTARATGAETL 86 (237)
T ss_pred EECCEEEEEEcCCCcccCCCcHHHhHHHHHHHHHcCCCEE
Confidence 46799999999999976653 3444778899999998865
No 189
>KOG0470 consensus 1,4-alpha-glucan branching enzyme/starch branching enzyme II [Carbohydrate transport and metabolism]
Probab=25.77 E-value=75 Score=39.02 Aligned_cols=56 Identities=18% Similarity=0.300 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCEEEec-ccccc-cCCcCce---eec-------c-C-----chHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETY-VFWNA-HEPLRRQ---YDF-------T-G-----NLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~y-v~Wn~-hEp~~G~---~df-------~-g-----~~dl~~fl~~a~~~gL~vilrp 117 (795)
+++|..+|.+|+|+|+.- |+ .+ |+-.-.- .+| . . ..++.++++.|+..||.|||..
T Consensus 258 eKvlphlK~LG~NaiqLmpi~-Ef~~~~~s~GY~~~nFFapssrYgt~~s~~ri~efK~lVd~aHs~GI~VlLDV 331 (757)
T KOG0470|consen 258 EKVLPHLKKLGYNAIQLMPIF-EFGHYYASWGYQVTNFFAPSSRYGTPESPCRINEFKELVDKAHSLGIEVLLDV 331 (757)
T ss_pred hhhhhHHHHhCccceEEeehh-hhhhhhhccCcceeEeecccccccCCCcccchHHHHHHHHHHhhCCcEEehhh
Confidence 456889999999999973 32 11 2222111 122 0 0 2489999999999999999986
No 190
>PF14701 hDGE_amylase: glucanotransferase domain of human glycogen debranching enzyme
Probab=25.58 E-value=2.9e+02 Score=32.13 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=64.7
Q ss_pred EeeCCCC--CCCChHHHHHHHHHcCCCEEEec-ccccccCCc----Cceeec-----cC-----chHHHHHHHHHH-HcC
Q 036343 49 SIHYPRS--TPGMWPDLIKKAKEGGLDAIETY-VFWNAHEPL----RRQYDF-----TG-----NLDLIRFIKTIQ-DQG 110 (795)
Q Consensus 49 ~~hy~r~--~~~~W~~~l~k~ka~G~N~V~~y-v~Wn~hEp~----~G~~df-----~g-----~~dl~~fl~~a~-~~g 110 (795)
+-+.+++ +-+.|+++|+.++++|.|+|..- +---..... ..+..| .. ..++.++++.++ ++|
T Consensus 11 QTvlsk~~G~~~~W~~~l~~~~~~GYNmIHftPlq~~G~S~S~YSI~Dql~~~~~~~~~~~~~~~~~v~~~v~~~~~~~~ 90 (423)
T PF14701_consen 11 QTVLSKWMGPFSDWEKHLKVISEKGYNMIHFTPLQERGESNSPYSIYDQLKFDPDFFPPGKESTFEDVKEFVKEAEKKYG 90 (423)
T ss_pred EEEhhhhcCCHhHHHHHHHHHHHcCCcEEEecccccCCCCCCCccccchhhcChhhcCCCccccHHHHHHHHHHHHHHcC
Confidence 3344453 55699999999999999999642 211111000 111111 11 149999999995 689
Q ss_pred cEEEEecCceeeeeeCCCC-cccccccCCCcccccCCChhHHHHH---HHHHHHHHHHHH
Q 036343 111 LYVILRIGPYVCAEWNYGG-FPVWLHNMPGIEELRTTNKVFMNEM---QNFTTLIVDMAK 166 (795)
Q Consensus 111 L~vilrpGPyicaEw~~GG-~P~WL~~~p~~~~~R~~d~~y~~~~---~~~~~~l~~~~~ 166 (795)
|.++... =|+--. ==.||..+|+.- .=..+.++|+.+ ++.+-++-..|.
T Consensus 91 ll~~~Dv------V~NHtA~nS~Wl~eHPEag-YN~~nsPHL~pA~eLD~aL~~fS~~l~ 143 (423)
T PF14701_consen 91 LLSMTDV------VLNHTANNSPWLREHPEAG-YNLENSPHLRPAYELDRALLEFSKDLE 143 (423)
T ss_pred ceEEEEE------eeccCcCCChHHHhCcccc-cCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 9876553 122111 246999999876 555566666533 344444444444
No 191
>PRK09875 putative hydrolase; Provisional
Probab=25.56 E-value=1.2e+02 Score=33.50 Aligned_cols=87 Identities=11% Similarity=0.090 Sum_probs=55.2
Q ss_pred EEeeCceEEECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHH
Q 036343 29 VSHDGRAITIDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQD 108 (795)
Q Consensus 29 v~~~~~~~~idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~ 108 (795)
+++-+..++++..++. +......-..+.-...|+.+|++|.+||-=--+. .-.+|...+.+++++
T Consensus 8 ~tl~HEHl~~~~~~~~---~~~~~~l~~~~~~~~el~~~~~~Gg~tiVd~T~~------------g~GRd~~~l~~is~~ 72 (292)
T PRK09875 8 YTLAHEHLHIDLSGFK---NNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNR------------YMGRNAQFMLDVMRE 72 (292)
T ss_pred cceecCCeEecChhhc---CCcccccccHHHHHHHHHHHHHhCCCeEEecCCC------------ccCcCHHHHHHHHHH
Confidence 5555666666553221 1111101122333457888999999988322211 224799999999999
Q ss_pred cCcEEEEecCceeeeeeCCCCcccccc
Q 036343 109 QGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 109 ~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
-|+.||..+|-|.-.. +|.|+.
T Consensus 73 tgv~Iv~~TG~y~~~~-----~p~~~~ 94 (292)
T PRK09875 73 TGINVVACTGYYQDAF-----FPEHVA 94 (292)
T ss_pred hCCcEEEcCcCCCCcc-----CCHHHh
Confidence 9999999999886333 688886
No 192
>cd06415 GH25_Cpl1-like Cpl-1 lysin (also known as Cpl-9 lysozyme / muramidase) is a bacterial cell wall endolysin encoded by the pneumococcal bacteriophage Cp-1, which cleaves the glycosidic N-acetylmuramoyl-(beta1,4)-N-acetylglucosamine bonds of the pneumococcal glycan chain, thus acting as an enzymatic antimicrobial agent (an enzybiotic) against streptococcal infections. Cpl-1 belongs to the CP family of lysozymes (CPL lysozymes) which includes the Cpl-7 lysin. Cpl-1 has a glycosyl hydrolase family 25 (GH25) catalytic domain with an irregular (beta/alpha)5-beta3 barrel and a C-terminal cell wall-anchoring module formed by six similar choline-binding repeats (ChBr's). The ChBr's facilitate the anchoring of Cpl-1 to the choline-containing teichoic acid of the pneumococcal cell wall. Other members of this domain family have an N-terminal CHAP (cysteine, histidine-dependent amidohydrolases/peptidases) domain similar to that of the firmicute CHAP lysins and associated with endopeptidase
Probab=25.35 E-value=2.3e+02 Score=28.95 Aligned_cols=44 Identities=18% Similarity=0.251 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHHcCcEEEEecCceeeeeeCC-----C--CcccccccCCCc
Q 036343 97 LDLIRFIKTIQDQGLYVILRIGPYVCAEWNY-----G--GFPVWLHNMPGI 140 (795)
Q Consensus 97 ~dl~~fl~~a~~~gL~vilrpGPyicaEw~~-----G--G~P~WL~~~p~~ 140 (795)
..+.+|++.+++.|.+++|=.+++.....-. . ..|-||.+++..
T Consensus 108 ~~~~~f~~~v~~~G~~~~iYt~~~~~~~~~~~~~~~~~~~~~lWiA~Y~~~ 158 (196)
T cd06415 108 SAILAFMDTIKDAGYKPMLYSYKPLLLNNVDYSQIIAKYPNSLWVAAYPTY 158 (196)
T ss_pred HHHHHHHHHHHHhCCCcEEEecHHHHHhccCHHHHHhhCCCCeEEEcCCCc
Confidence 4577888888888888777777654333211 1 134788776543
No 193
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=25.11 E-value=52 Score=34.39 Aligned_cols=16 Identities=38% Similarity=0.476 Sum_probs=14.1
Q ss_pred eeEEEEEcCeeecccc
Q 036343 615 GKGFAWVNGYNLGRYW 630 (795)
Q Consensus 615 gKG~vwVNG~nLGRYW 630 (795)
.+|.|||||++|.|.=
T Consensus 55 t~G~i~~~~~dl~~l~ 70 (223)
T COG2884 55 TRGKILVNGHDLSRLK 70 (223)
T ss_pred CCceEEECCeeccccc
Confidence 6799999999999863
No 194
>PRK12331 oxaloacetate decarboxylase; Provisional
Probab=24.11 E-value=1.6e+02 Score=34.57 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=44.6
Q ss_pred eeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEe
Q 036343 50 IHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 50 ~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilr 116 (795)
..|-+.|.+--++.++++.+.|+..|+++++-|.. .++...++.|+++|+.|.+.
T Consensus 88 ~G~~~~pddvv~~~v~~A~~~Gvd~irif~~lnd~------------~n~~~~v~~ak~~G~~v~~~ 142 (448)
T PRK12331 88 LGYRNYADDVVESFVQKSVENGIDIIRIFDALNDV------------RNLETAVKATKKAGGHAQVA 142 (448)
T ss_pred cccccCchhhHHHHHHHHHHCCCCEEEEEEecCcH------------HHHHHHHHHHHHcCCeEEEE
Confidence 33555677777889999999999999999986654 25888999999999987655
No 195
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=24.07 E-value=2.8e+02 Score=29.09 Aligned_cols=124 Identities=17% Similarity=0.220 Sum_probs=71.0
Q ss_pred CChHHHHHHHHHcCCCE-EEe--cccccccCC---cCc--eeec-----------cC--chHHHHHHHHHHHcCcEEEEe
Q 036343 58 GMWPDLIKKAKEGGLDA-IET--YVFWNAHEP---LRR--QYDF-----------TG--NLDLIRFIKTIQDQGLYVILR 116 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~-V~~--yv~Wn~hEp---~~G--~~df-----------~g--~~dl~~fl~~a~~~gL~vilr 116 (795)
+.-.+.++++|+.|+.+ |+| |++|...+. .=. -+|+ +| +..+-+.|+.+.+.|..+.+|
T Consensus 54 ~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~D~~l~DiK~~d~~~~~~~tG~~~~~il~nl~~l~~~g~~v~iR 133 (213)
T PRK10076 54 EFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPR 133 (213)
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhcCEEEEeeccCCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEEE
Confidence 44568899999999874 444 555533222 111 1232 22 234556677788889998888
Q ss_pred cCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeeccc-----------
Q 036343 117 IGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIEN----------- 185 (795)
Q Consensus 117 pGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiEN----------- 185 (795)
.- . .|++ ++++.-++++.+|++.+. +. +|-...-.+
T Consensus 134 ~~-v----------------IPg~----nd~~e~i~~ia~~l~~l~--~~----------~~~llpyh~~g~~Ky~~lg~ 180 (213)
T PRK10076 134 LP-L----------------IPGF----TLSRENMQQALDVLIPLG--IK----------QIHLLPFHQYGEPKYRLLGK 180 (213)
T ss_pred EE-E----------------ECCC----CCCHHHHHHHHHHHHHcC--Cc----------eEEEecCCccchhHHHHcCC
Confidence 51 1 3444 345666777777766541 11 221111111
Q ss_pred ccccccccCCcccHHHHHHHHHHhhcCCCcc
Q 036343 186 EYGNVMSDYGDAGKSYINWCAKMATSLDIGV 216 (795)
Q Consensus 186 Eyg~~~~~~~~~~~~y~~~l~~~~~~~g~~v 216 (795)
+|-.. .....+++.|+.+++.+++.|+.+
T Consensus 181 ~y~~~--~~~~~~~~~l~~~~~~~~~~gl~~ 209 (213)
T PRK10076 181 TWSMK--EVPAPSSADVATMREMAERAGFQV 209 (213)
T ss_pred cCccC--CCCCcCHHHHHHHHHHHHHcCCeE
Confidence 22110 112467899999999999998875
No 196
>KOG1065 consensus Maltase glucoamylase and related hydrolases, glycosyl hydrolase family 31 [Carbohydrate transport and metabolism]
Probab=23.97 E-value=1.2e+02 Score=37.93 Aligned_cols=61 Identities=21% Similarity=0.387 Sum_probs=45.0
Q ss_pred HHHHHHHHHcCCC--EEEecccccccCCcCceeecc----CchHHHHHHHHHHHcCcEEEEecCceeeeeeC
Q 036343 61 PDLIKKAKEGGLD--AIETYVFWNAHEPLRRQYDFT----GNLDLIRFIKTIQDQGLYVILRIGPYVCAEWN 126 (795)
Q Consensus 61 ~~~l~k~ka~G~N--~V~~yv~Wn~hEp~~G~~df~----g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~ 126 (795)
+|+.+.+++||+. ++-+-+.|. ++-=||+ ...++..|++-.++.|+++|+-+-|+|.....
T Consensus 314 ~dvv~~~~~agiPld~~~~DiDyM-----d~ykDFTvd~~~fp~~~~fv~~Lh~~G~kyvliidP~is~~~~ 380 (805)
T KOG1065|consen 314 RDVVENYRAAGIPLDVIVIDIDYM-----DGYKDFTVDKVWFPDLKDFVDDLHARGFKYVLIIDPFISTNSS 380 (805)
T ss_pred HHHHHHHHHcCCCcceeeeehhhh-----hcccceeeccccCcchHHHHHHHHhCCCeEEEEeCCccccCcc
Confidence 6899999999998 555556664 2322333 12368999999999999999998888865544
No 197
>COG3684 LacD Tagatose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=23.56 E-value=66 Score=34.82 Aligned_cols=52 Identities=21% Similarity=0.257 Sum_probs=43.9
Q ss_pred HHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 63 LIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.-+++|+.|-+.|-+-|.|..-||+-.+-... -+++|...|..+||-.+|-|
T Consensus 116 sa~riK~~G~~avK~Lvy~~~D~~e~neqk~a---~ierigsec~aedi~f~lE~ 167 (306)
T COG3684 116 SAKRIKEDGGDAVKFLVYYRSDEDEINEQKLA---YIERIGSECHAEDLPFFLEP 167 (306)
T ss_pred CHHHHHHhcccceEEEEEEcCCchHHhHHHHH---HHHHHHHHhhhcCCceeEee
Confidence 35689999999999999999999944443433 79999999999999998887
No 198
>cd07937 DRE_TIM_PC_TC_5S Pyruvate carboxylase and Transcarboxylase 5S, carboxyltransferase domain. This family includes the carboxyltransferase domains of pyruvate carboxylase (PC) and the transcarboxylase (TC) 5S subunit. Transcarboxylase 5S is a cobalt-dependent metalloenzyme subunit of the biotin-dependent transcarboxylase multienzyme complex. Transcarboxylase 5S transfers carbon dioxide from the 1.3S biotin to pyruvate in the second of two carboxylation reactions catalyzed by TC. The first reaction involves the transfer of carbon dioxide from methylmalonyl-CoA to the 1.3S biotin, and is catalyzed by the 12S subunit. These two steps allow a carboxylate group to be transferred from oxaloacetate to propionyl-CoA to yield pyruvate and methylmalonyl-CoA. The catalytic domain of transcarboxylase 5S has a canonical TIM-barrel fold with a large C-terminal extension that forms a funnel leading to the active site. Transcarboxylase 5S forms a homodimer and there are six dimers per complex
Probab=23.38 E-value=1.7e+02 Score=31.65 Aligned_cols=48 Identities=21% Similarity=0.226 Sum_probs=39.9
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEE
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVIL 115 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vil 115 (795)
|.+.=++++++..+.|+..|+++++.+- + ..+...++.|+++|+.|..
T Consensus 89 p~~~~~~di~~~~~~g~~~iri~~~~~~---------~---~~~~~~i~~ak~~G~~v~~ 136 (275)
T cd07937 89 PDDVVELFVEKAAKNGIDIFRIFDALND---------V---RNLEVAIKAVKKAGKHVEG 136 (275)
T ss_pred CcHHHHHHHHHHHHcCCCEEEEeecCCh---------H---HHHHHHHHHHHHCCCeEEE
Confidence 4445688999999999999999988665 2 3789999999999998775
No 199
>TIGR03700 mena_SCO4494 putative menaquinone biosynthesis protein, SCO4494 family. Members of this protein family appear to be involved in menaquinone biosynthesis by an alternate pathway via futalosine, based on close phylogenetic correlation with known markers of the futalosine pathway, gene clustering in many organisms, and paralogy with the SCO4550 protein.
Probab=23.33 E-value=69 Score=35.98 Aligned_cols=51 Identities=16% Similarity=0.240 Sum_probs=33.5
Q ss_pred hHHHHHHHHHcCCCEEE-----ecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE
Q 036343 60 WPDLIKKAKEGGLDAIE-----TYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV 113 (795)
Q Consensus 60 W~~~l~k~ka~G~N~V~-----~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v 113 (795)
-++.|+++|++|++.+- ++..--.+.-.+++..++ +.-+.++.|++.||.+
T Consensus 149 ~~e~l~~LkeAGld~~~~~g~E~~~~~v~~~i~~~~~~~~---~~l~~i~~a~~~Gi~~ 204 (351)
T TIGR03700 149 TEEVLDELKEAGLDSMPGGGAEIFAEEVRQQICPEKISAE---RWLEIHRTAHELGLKT 204 (351)
T ss_pred HHHHHHHHHHcCCCcCCCCcccccCHHHHhhcCCCCCCHH---HHHHHHHHHHHcCCCc
Confidence 45679999999997554 222222233335554444 5667899999999976
No 200
>PRK06852 aldolase; Validated
Probab=22.86 E-value=2.2e+02 Score=31.74 Aligned_cols=76 Identities=11% Similarity=0.208 Sum_probs=50.9
Q ss_pred HHHHHHcC------CCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccC
Q 036343 64 IKKAKEGG------LDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNM 137 (795)
Q Consensus 64 l~k~ka~G------~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~ 137 (795)
++.+-++| ...|.+.|+|. +.+..+-..++.+..+.|++.||-+|++. +|. -
T Consensus 121 VeeAvrlG~~~~~~AdAV~v~v~~G------s~~E~~ml~~l~~v~~ea~~~GlPll~~~------------ypr----G 178 (304)
T PRK06852 121 VEQVVEFKENSGLNILGVGYTIYLG------SEYESEMLSEAAQIIYEAHKHGLIAVLWI------------YPR----G 178 (304)
T ss_pred HHHHHhcCCccCCCceEEEEEEecC------CHHHHHHHHHHHHHHHHHHHhCCcEEEEe------------ecc----C
Confidence 44566666 77999999998 23334555699999999999999988753 111 2
Q ss_pred CCcccccCCChhHHHHHHHHHHHHHH
Q 036343 138 PGIEELRTTNKVFMNEMQNFTTLIVD 163 (795)
Q Consensus 138 p~~~~~R~~d~~y~~~~~~~~~~l~~ 163 (795)
+.+. ...+|.++.++.|.-.+|..
T Consensus 179 ~~i~--~~~~~~~ia~aaRiaaELGA 202 (304)
T PRK06852 179 KAVK--DEKDPHLIAGAAGVAACLGA 202 (304)
T ss_pred cccC--CCccHHHHHHHHHHHHHHcC
Confidence 2332 44567777777666555543
No 201
>cd06525 GH25_Lyc-like Lyc muramidase is an autolytic lysozyme (autolysin) from Clostridium acetobutylicum encoded by the lyc gene. Lyc has a glycosyl hydrolase family 25 (GH25) catalytic domain. Endo-N-acetylmuramidases are lysozymes (also referred to as peptidoglycan hydrolases) that degrade bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues.
Probab=22.82 E-value=46 Score=33.60 Aligned_cols=43 Identities=21% Similarity=0.348 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHc-CcEEEEecCceeeeee---CCCCcccccccCCC
Q 036343 97 LDLIRFIKTIQDQ-GLYVILRIGPYVCAEW---NYGGFPVWLHNMPG 139 (795)
Q Consensus 97 ~dl~~fl~~a~~~-gL~vilrpGPyicaEw---~~GG~P~WL~~~p~ 139 (795)
..+.+|++..+++ |..++|=.+++..... .....|.||.+.+.
T Consensus 103 ~~~~~f~~~v~~~~G~~~~iY~~~~~~~~~~~~~~~~~~lWiA~Y~~ 149 (184)
T cd06525 103 DYVLRFIEEFEKLSGLKVGIYTYTSFINNNLDSRLSSYPLWIANYGV 149 (184)
T ss_pred HHHHHHHHHHHHHHCCCeEEEecHHHHHHhccccccCCCeEEEeccC
Confidence 4678888888887 8888887776543221 23456778876543
No 202
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism]
Probab=22.58 E-value=6.5e+02 Score=27.74 Aligned_cols=117 Identities=15% Similarity=0.126 Sum_probs=77.8
Q ss_pred CCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCccccccc
Q 036343 57 PGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHN 136 (795)
Q Consensus 57 ~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~ 136 (795)
-+.-+.+|+.++.-+. +|++|= +...-|+.++.+|.+.|++|+|.. |+.
T Consensus 62 a~~~~sDLe~l~~~t~-~IR~Y~--------------sDCn~le~v~pAa~~~g~kv~lGi---------------w~t- 110 (305)
T COG5309 62 ADQVASDLELLASYTH-SIRTYG--------------SDCNTLENVLPAAEASGFKVFLGI---------------WPT- 110 (305)
T ss_pred HHHHHhHHHHhccCCc-eEEEee--------------ccchhhhhhHHHHHhcCceEEEEE---------------eec-
Confidence 4557789999998887 999983 123368888999999999999874 333
Q ss_pred CCCcccccCCChhHHHHHHHHHHHHHHHHHhccccccCCCcEEEeecccccccccccCC-cccHHHHHHHHHHhhcCCCc
Q 036343 137 MPGIEELRTTNKVFMNEMQNFTTLIVDMAKKEKLFASQGGPIILAQIENEYGNVMSDYG-DAGKSYINWCAKMATSLDIG 215 (795)
Q Consensus 137 ~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~~~~~~~gGpII~~QiENEyg~~~~~~~-~~~~~y~~~l~~~~~~~g~~ 215 (795)
+++. ..+++ .++..+. + +..--.|..|=|-||-=.-. ..- ..-.+|+.-.|.+++++|.+
T Consensus 111 -dd~~----------~~~~~---til~ay~--~--~~~~d~v~~v~VGnEal~r~-~~tasql~~~I~~vrsav~~agy~ 171 (305)
T COG5309 111 -DDIH----------DAVEK---TILSAYL--P--YNGWDDVTTVTVGNEALNRN-DLTASQLIEYIDDVRSAVKEAGYD 171 (305)
T ss_pred -cchh----------hhHHH---HHHHHHh--c--cCCCCceEEEEechhhhhcC-CCCHHHHHHHHHHHHHHHHhcCCC
Confidence 2232 22332 2333333 2 11123688899999964211 011 13358999999999999999
Q ss_pred cceeeeCC
Q 036343 216 VPWIMCQE 223 (795)
Q Consensus 216 vp~~~~~~ 223 (795)
+|..+.+.
T Consensus 172 gpV~T~ds 179 (305)
T COG5309 172 GPVTTVDS 179 (305)
T ss_pred Cceeeccc
Confidence 99887654
No 203
>TIGR03551 F420_cofH 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit. This enzyme, together with CofG, complete the biosynthesis of 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, the chromophore of coenzyme F420. The chromophore is also used in cyanobacteria DNA photolyases.
Probab=22.51 E-value=75 Score=35.53 Aligned_cols=49 Identities=22% Similarity=0.314 Sum_probs=32.1
Q ss_pred HHHHHHHHHcCCCEEEecccccccC------CcCceeeccCchHHHHHHHHHHHcCcEE
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHE------PLRRQYDFTGNLDLIRFIKTIQDQGLYV 113 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hE------p~~G~~df~g~~dl~~fl~~a~~~gL~v 113 (795)
++.+++||++|++.+-. .-..... -.|++..++ +..+.++.|+++||.|
T Consensus 141 ~e~l~~LkeAGl~~i~~-~~~E~~~~~v~~~i~~~~~~~~---~~~~~i~~a~~~Gi~v 195 (343)
T TIGR03551 141 EEALKRLKEAGLDSMPG-TAAEILDDEVRKVICPDKLSTA---EWIEIIKTAHKLGIPT 195 (343)
T ss_pred HHHHHHHHHhCcccccC-cchhhcCHHHHHhcCCCCCCHH---HHHHHHHHHHHcCCcc
Confidence 67899999999998740 0111111 124444444 5578899999999975
No 204
>cd07944 DRE_TIM_HOA_like 4-hydroxy-2-oxovalerate aldolase-like, N-terminal catalytic TIM barrel domain. This family of bacterial enzymes is sequence-similar to 4-hydroxy-2-oxovalerate aldolase (HOA) but its exact function is unknown. This family includes the Bacteroides vulgatus Bvu_2661 protein and belongs to the DRE-TIM metallolyase superfamily. DRE-TIM metallolyases include 2-isopropylmalate synthase (IPMS), alpha-isopropylmalate synthase (LeuA), 3-hydroxy-3-methylglutaryl-CoA lyase, homocitrate synthase, citramalate synthase, 4-hydroxy-2-oxovalerate aldolase, re-citrate synthase, transcarboxylase 5S, pyruvate carboxylase, AksA, and FrbC. These members all share a conserved triose-phosphate isomerase (TIM) barrel domain consisting of a core beta(8)-alpha(8) motif with the eight parallel beta strands forming an enclosed barrel surrounded by eight alpha helices. The domain has a catalytic center containing a divalent cation-binding site formed by a cluster of invariant residues t
Probab=22.47 E-value=1.4e+02 Score=32.20 Aligned_cols=45 Identities=24% Similarity=0.445 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 61 PDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.++++.+.+.|+..|++.+..+ +++ .+.+.++.|+++|+.|.+-+
T Consensus 85 ~~~l~~a~~~gv~~iri~~~~~---------~~~---~~~~~i~~ak~~G~~v~~~~ 129 (266)
T cd07944 85 IDLLEPASGSVVDMIRVAFHKH---------EFD---EALPLIKAIKEKGYEVFFNL 129 (266)
T ss_pred HHHHHHHhcCCcCEEEEecccc---------cHH---HHHHHHHHHHHCCCeEEEEE
No 205
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=22.17 E-value=1.8e+02 Score=31.15 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=47.4
Q ss_pred CCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecC
Q 036343 39 DGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIG 118 (795)
Q Consensus 39 dG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpG 118 (795)
++.++.+.+=.+|+.-.-.-.=+--.+++|++|++.|-+. |..++--|.- .+.++.+=++.|.++||.+|++.|
T Consensus 52 ~~~~i~vgAQnv~~~~~Ga~TGevS~~mL~d~G~~~viiG-----HSERR~~f~E-t~~~i~~Kv~~a~~~gl~pIvCiG 125 (242)
T cd00311 52 EGSKIKVGAQNVSPEDSGAFTGEISAEMLKDAGAKYVIIG-----HSERRQYFGE-TDEDVAKKVKAALEAGLTPILCVG 125 (242)
T ss_pred cCCCeEEEecccccccCCCCcCcCCHHHHHHcCCCEEEeC-----cccccCcCCC-CcHHHHHHHHHHHHCCCEEEEEeC
Confidence 4444444333355433211122234568999999988875 4444433433 367899999999999999999987
No 206
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=21.58 E-value=2.3e+02 Score=30.96 Aligned_cols=61 Identities=21% Similarity=0.317 Sum_probs=42.9
Q ss_pred CCCChHHHHHHHHHcCCCEEEecccccccCCcCceeecc---CchHHHHHHHHHHHcCcEEEEec
Q 036343 56 TPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFT---GNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 56 ~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~---g~~dl~~fl~~a~~~gL~vilrp 117 (795)
.-+.-+.-+.-+.++|+..|-+-.-|... -....+||+ ...||.++++-|++.|..|+|+-
T Consensus 30 ~t~~~k~yIDfAa~~G~eYvlvD~GW~~~-~~~~~~d~~~~~~~~dl~elv~Ya~~KgVgi~lw~ 93 (273)
T PF10566_consen 30 TTETQKRYIDFAAEMGIEYVLVDAGWYGW-EKDDDFDFTKPIPDFDLPELVDYAKEKGVGIWLWY 93 (273)
T ss_dssp SHHHHHHHHHHHHHTT-SEEEEBTTCCGS---TTT--TT-B-TT--HHHHHHHHHHTT-EEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccccccc-cccccccccccCCccCHHHHHHHHHHcCCCEEEEE
Confidence 33456778899999999999998889872 224567775 45799999999999999998883
No 207
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=21.44 E-value=1.4e+02 Score=34.58 Aligned_cols=68 Identities=24% Similarity=0.246 Sum_probs=47.2
Q ss_pred CCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEE-EEecCceeeeeeCCCCccc
Q 036343 55 STPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYV-ILRIGPYVCAEWNYGGFPV 132 (795)
Q Consensus 55 ~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~v-ilrpGPyicaEw~~GG~P~ 132 (795)
+..+.-+..|+.+|+.|+|+|-++..=.---..+-.|.=. ..|-..+++++.+.|..+ +|..| ||+|.
T Consensus 190 ~~~~~~~~lLd~ak~l~lnvvGvsfHvGSgc~d~~~y~~A-i~dAr~vfd~g~e~Gf~m~~LdiG---------GGf~g 258 (448)
T KOG0622|consen 190 CSLDNCRHLLDMAKELELNVVGVSFHVGSGCTDLQAYRDA-ISDARNVFDMGAELGFEMDILDIG---------GGFPG 258 (448)
T ss_pred CCHHHHHHHHHHHHHcCceEEEEEEEecCCCCCHHHHHHH-HHHHHHHHHHHHhcCceEEEeecC---------CCCCC
Confidence 3455667899999999999999987644322223333221 346667788889999984 78875 78875
No 208
>TIGR03234 OH-pyruv-isom hydroxypyruvate isomerase. This enzyme interconverts tartronate semi-aldehyde (TSA, aka 2-hydroxy 3-oxopropionate) and hydroxypyruvate. The E. coli enzyme has been characterized and found to be specific for TSA, contain no cofactors, and have a rather high Km for hydroxypyruvate of 12.5 mM. The gene is ofter found in association with glyoxalate carboligase (which produces TSA), but has been shown to have no effect on growth on glyoxalate when knocked out. This is consistent with the fact that the gene for tartronate semialdehyde reductase (glxR) is also associated and may have primary responsibility for the catabolism of TSA.
Probab=21.43 E-value=1.1e+02 Score=32.09 Aligned_cols=59 Identities=12% Similarity=-0.033 Sum_probs=38.4
Q ss_pred CChHHHHHHHHHcCCCEEEecccccccC-CcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 58 GMWPDLIKKAKEGGLDAIETYVFWNAHE-PLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 58 ~~W~~~l~k~ka~G~N~V~~yv~Wn~hE-p~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
+.+++.++.++++|..+|.+...+.--+ +.+-.++ .-...+.++.+.|++.|+.+.+-|
T Consensus 84 ~~~~~~i~~a~~lg~~~i~~~~g~~~~~~~~~~~~~-~~~~~l~~l~~~A~~~gi~l~lE~ 143 (254)
T TIGR03234 84 EGVALAIAYARALGCPQVNCLAGKRPAGVSPEEARA-TLVENLRYAADALDRIGLTLLIEP 143 (254)
T ss_pred HHHHHHHHHHHHhCCCEEEECcCCCCCCCCHHHHHH-HHHHHHHHHHHHHHhcCCEEEEEE
Confidence 5677788999999999998643221100 0111111 112458888999999999998886
No 209
>PRK08599 coproporphyrinogen III oxidase; Provisional
Probab=21.17 E-value=86 Score=35.41 Aligned_cols=49 Identities=16% Similarity=0.192 Sum_probs=38.5
Q ss_pred HHHHHHHHHcCCCEEEeccc---ccccCCcCceeeccCchHHHHHHHHHHHcCcE
Q 036343 61 PDLIKKAKEGGLDAIETYVF---WNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLY 112 (795)
Q Consensus 61 ~~~l~k~ka~G~N~V~~yv~---Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~ 112 (795)
++.++.||++|+|.|++.|- -..++--....+++ ++.+.++.++++|+.
T Consensus 100 ~e~l~~l~~~G~~rvsiGvqS~~~~~l~~l~r~~~~~---~~~~~i~~l~~~g~~ 151 (377)
T PRK08599 100 KEKLQVLKDSGVNRISLGVQTFNDELLKKIGRTHNEE---DVYEAIANAKKAGFD 151 (377)
T ss_pred HHHHHHHHHcCCCEEEEecccCCHHHHHHcCCCCCHH---HHHHHHHHHHHcCCC
Confidence 57899999999999999874 34444444456666 899999999999975
No 210
>PF04914 DltD_C: DltD C-terminal region; InterPro: IPR006998 The dlt operon (dltA to dltD) of Lactobacillus rhamnosus 7469 encodes four proteins responsible for the esterification of lipoteichoic acid (LTA) by D-alanine. These esters play an important role in controlling the net anionic charge of the poly (GroP) moiety of LTA. DltA and DltC encode the D-alanine-D-alanyl carrier protein ligase (Dcl) and D-alanyl carrier protein (Dcp), respectively. Whereas the functions of DltA and DltC are defined, the functions of DltB and DltD are unknown. In vitro assays showed that DltD bound Dcp for ligation with D-alanine by Dcl in the presence of ATP. In contrast, the homologue of Dcp, the Escherichia coli acyl carrier protein (ACP), involved in fatty acid biosynthesis, was not bound to DltD and thus was not ligated with D-alanine. DltD also catalyzed the hydrolysis of the mischarged D-alanyl-ACP. The hydrophobic N-terminal sequence of DltD was required for anchoring the protein in the membrane. It is hypothesized that this membrane-associated DltD facilitates the binding of Dcp and Dcl for ligation of Dcp with D-alanine and that the resulting D-alanyl-Dcp is translocated to the primary site of D-alanylation []. These sequences contain the C-terminal region of DltD.; PDB: 3BMA_C.
Probab=20.64 E-value=78 Score=30.74 Aligned_cols=53 Identities=23% Similarity=0.386 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccccCCCcccccCCChhHHHHHHHHHHHHHHHHHhc
Q 036343 97 LDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKKE 168 (795)
Q Consensus 97 ~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~~ 168 (795)
.||..||++|++.|+.|++=.-| +++.| .. +-++. .+.-++++++|-.+++++
T Consensus 36 ~Dl~l~L~~~k~~g~~~lfVi~P-vNg~w--------yd-ytG~~---------~~~r~~~y~kI~~~~~~~ 88 (130)
T PF04914_consen 36 DDLQLLLDVCKELGIDVLFVIQP-VNGKW--------YD-YTGLS---------KEMRQEYYKKIKYQLKSQ 88 (130)
T ss_dssp HHHHHHHHHHHHTT-EEEEEE-----HHH--------HH-HTT-----------HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCceEEEecC-CcHHH--------HH-HhCCC---------HHHHHHHHHHHHHHHHHC
Confidence 49999999999999998765544 33333 31 12221 244567788887777743
No 211
>PRK09250 fructose-bisphosphate aldolase; Provisional
Probab=20.34 E-value=1.1e+02 Score=34.53 Aligned_cols=49 Identities=12% Similarity=0.165 Sum_probs=39.8
Q ss_pred HHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEec
Q 036343 63 LIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRI 117 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrp 117 (795)
..+.+-++|...|.+.|+|. +.+...-..++.+..+.|++.||-||++.
T Consensus 151 sVedAlrLGAdAV~~tvy~G------s~~E~~ml~~l~~i~~ea~~~GlPlv~~~ 199 (348)
T PRK09250 151 SVEDALRLGAVAVGATIYFG------SEESRRQIEEISEAFEEAHELGLATVLWS 199 (348)
T ss_pred cHHHHHHCCCCEEEEEEecC------CHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 36678899999999999998 22334445699999999999999999864
No 212
>PRK09267 flavodoxin FldA; Validated
Probab=20.33 E-value=5.3e+02 Score=25.31 Aligned_cols=74 Identities=9% Similarity=0.099 Sum_probs=48.7
Q ss_pred ECCeEEEEEEEEeeCCCCCCCChHHHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEE
Q 036343 38 IDGERKILLSGSIHYPRSTPGMWPDLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVI 114 (795)
Q Consensus 38 idG~p~~~~sG~~hy~r~~~~~W~~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vi 114 (795)
++....++++...|....++..|.+-+++++...++-..+.+|= ......-.-.| ..-+..+-+++++.|..++
T Consensus 44 l~~~d~vi~g~pt~~~G~~~~~~~~fl~~~~~~~l~~k~vaifg-~g~~~~~~~~~--~~~~~~l~~~l~~~g~~~v 117 (169)
T PRK09267 44 FEAYDLLILGIPTWGYGELQCDWDDFLPELEEIDFSGKKVALFG-LGDQEDYAEYF--CDAMGTLYDIVEPRGATIV 117 (169)
T ss_pred HhhCCEEEEEecCcCCCCCCHHHHHHHHHHhcCCCCCCEEEEEe-cCCCCcchHHH--HHHHHHHHHHHHHCCCEEE
Confidence 44556788999999878888999988888887777766666663 22111100112 2246667777888896654
No 213
>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]
Probab=20.24 E-value=3.4e+02 Score=30.24 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeeeeeCCCCcccccc
Q 036343 62 DLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCAEWNYGGFPVWLH 135 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyicaEw~~GG~P~WL~ 135 (795)
.++...++.|.+||-.--.= .-.+|..+..+.+++-||.+|..+|+|.-+.|+ .|+.
T Consensus 52 ~e~~~~~a~Gg~TIVD~T~~------------~~GRdv~~m~~vs~atglnIV~~TGfy~~~~~p-----~~~~ 108 (316)
T COG1735 52 AELKRLMARGGQTIVDATNI------------GIGRDVLKMRRVAEATGLNIVAATGFYKAAFHP-----EYFA 108 (316)
T ss_pred HHHHHHHHcCCCeEeeCCcc------------ccCcCHHHHHHHHHHhCCcEEEeccccccccch-----hHHh
Confidence 35667777899888543211 123799999999999999999999999988864 7776
No 214
>PLN02540 methylenetetrahydrofolate reductase
Probab=20.23 E-value=2.5e+02 Score=33.90 Aligned_cols=91 Identities=15% Similarity=0.214 Sum_probs=62.8
Q ss_pred HHHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcC--cEEEEecCceee-------eeeCCCCccc
Q 036343 62 DLIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQG--LYVILRIGPYVC-------AEWNYGGFPV 132 (795)
Q Consensus 62 ~~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~g--L~vilrpGPyic-------aEw~~GG~P~ 132 (795)
++|++-.++|.+.+-|-.+ ||.+ .+.+|++.|++.| +.||...-|-.. ++|..--+|.
T Consensus 160 ~~Lk~KvdAGAdFiITQlf----------FD~d---~f~~f~~~~r~~Gi~vPIipGImPI~S~k~l~r~~~l~Gi~IP~ 226 (565)
T PLN02540 160 AYLKEKVDAGADLIITQLF----------YDTD---IFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTKIPA 226 (565)
T ss_pred HHHHHHHHcCCCEEeeccc----------cCHH---HHHHHHHHHHhcCCCCCEEeeecccCCHHHHHHHHhccCCcCCH
Confidence 3444555689999999765 5555 7889999999998 556776666543 3455555788
Q ss_pred ccccCCCcccccCCChhHHHHHHHHHHHHHHHHHh
Q 036343 133 WLHNMPGIEELRTTNKVFMNEMQNFTTLIVDMAKK 167 (795)
Q Consensus 133 WL~~~p~~~~~R~~d~~y~~~~~~~~~~l~~~~~~ 167 (795)
|+.+.=+- ...++...++.--++..++++.|.+
T Consensus 227 ~i~~rLe~--~kddde~v~~~Gieia~e~~~~L~~ 259 (565)
T PLN02540 227 EITAALEP--IKDNDEAVKAYGIHLGTEMCKKILA 259 (565)
T ss_pred HHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 88751110 2345566777788888888888873
No 215
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=20.08 E-value=2e+02 Score=30.02 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=52.8
Q ss_pred HHHHHHHcCCCEEEecccccccCCcCceeeccCchHHHHHHHHHHHcCcEEEEecCceeee-----eeCCCCc---cccc
Q 036343 63 LIKKAKEGGLDAIETYVFWNAHEPLRRQYDFTGNLDLIRFIKTIQDQGLYVILRIGPYVCA-----EWNYGGF---PVWL 134 (795)
Q Consensus 63 ~l~k~ka~G~N~V~~yv~Wn~hEp~~G~~df~g~~dl~~fl~~a~~~gL~vilrpGPyica-----Ew~~GG~---P~WL 134 (795)
-.+++|++|++.|-+. +-|. + |.-+ |+.+=++.|.++||.+||+.. .+.- .|..=-+ |.|.
T Consensus 73 S~~mLkd~G~~~viiG----HSER-R--f~Et---di~~Kv~~a~~~gl~~IvCi~-~v~~q~~~~~~~~~vIAYEPvWA 141 (205)
T TIGR00419 73 SAEMLKDIGAKGTLIN----HSER-R--MKLA---DIEKKIARLKELGLTSVVCTN-NVLTTAAAAALEPDVVAVEPPEL 141 (205)
T ss_pred CHHHHHHcCCCEEEEC----cccC-C--CCcc---HHHHHHHHHHHCCCEEEEEEH-HHHHHHHhhhhcCeEEEECCHHH
Confidence 4568999999987764 3344 4 5555 699999999999999999872 1111 1111012 6776
Q ss_pred ccCCCcccccCCChhHHHHHHHHHH
Q 036343 135 HNMPGIEELRTTNKVFMNEMQNFTT 159 (795)
Q Consensus 135 ~~~p~~~~~R~~d~~y~~~~~~~~~ 159 (795)
.- . =++..+...+++.++++
T Consensus 142 IG---t--G~~as~~~~~~v~~~ir 161 (205)
T TIGR00419 142 IG---T--GIPVSPAQPEVVHGSVR 161 (205)
T ss_pred hC---C--CCCCCHHHHHHHHHHHH
Confidence 53 1 14556777778887777
Done!