Query 036352
Match_columns 493
No_of_seqs 262 out of 1605
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 20:22:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036352.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036352hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 4.4E-65 1.5E-69 545.8 43.2 375 86-474 2-386 (605)
2 3d2f_A Heat shock protein homo 100.0 2.6E-64 8.8E-69 543.7 39.4 373 87-478 3-391 (675)
3 2kho_A Heat shock protein 70; 100.0 3.9E-64 1.3E-68 538.5 38.8 374 86-473 2-385 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 6.4E-63 2.2E-67 524.2 41.5 370 84-473 2-383 (554)
5 3i33_A Heat shock-related 70 k 100.0 6.2E-61 2.1E-65 492.5 43.2 369 85-473 22-404 (404)
6 1dkg_D Molecular chaperone DNA 100.0 1.9E-60 6.3E-65 485.5 41.9 372 86-471 2-383 (383)
7 4gni_A Putative heat shock pro 100.0 1.4E-60 4.8E-65 490.5 40.1 372 84-475 11-406 (409)
8 3qfu_A 78 kDa glucose-regulate 100.0 9.7E-60 3.3E-64 482.0 43.3 367 85-471 17-394 (394)
9 2v7y_A Chaperone protein DNAK; 100.0 1.1E-58 3.7E-63 487.9 42.7 351 86-473 2-354 (509)
10 1jce_A ROD shape-determining p 100.0 8.8E-42 3E-46 342.6 21.5 311 86-472 3-328 (344)
11 3h1q_A Ethanolamine utilizatio 99.9 2E-26 6.7E-31 223.1 21.5 204 199-467 68-272 (272)
12 2fxu_A Alpha-actin-1, actin, a 99.9 5.1E-27 1.8E-31 237.7 15.1 297 87-469 6-349 (375)
13 2fsj_A Hypothetical protein TA 99.9 1.1E-27 3.8E-32 239.5 9.5 226 198-469 95-344 (346)
14 4a2a_A Cell division protein F 99.9 3.4E-26 1.2E-30 233.7 19.9 203 236-472 167-396 (419)
15 1k8k_A ARP3, actin-like protei 99.9 1.5E-26 5.1E-31 237.8 16.9 309 86-469 5-387 (418)
16 2ych_A Competence protein PILM 99.9 3.8E-27 1.3E-31 239.0 10.8 318 86-468 13-373 (377)
17 2zgy_A Plasmid segregation pro 99.9 2.4E-22 8.3E-27 198.9 12.9 224 197-467 73-319 (320)
18 1k8k_B ARP2, actin-like protei 99.8 1.4E-21 4.6E-26 198.9 4.8 302 87-469 7-364 (394)
19 4ehu_A Activator of 2-hydroxyi 99.7 1.1E-17 3.6E-22 162.0 11.2 190 249-475 69-260 (276)
20 3js6_A Uncharacterized PARM pr 99.7 7E-18 2.4E-22 168.5 10.0 207 224-476 114-343 (355)
21 3qb0_A Actin-related protein 4 99.7 7E-17 2.4E-21 166.6 13.1 178 87-323 24-209 (498)
22 3dwl_A Actin-related protein 3 99.7 1.5E-17 5.2E-22 169.8 6.7 246 197-469 98-396 (427)
23 4apw_A ALP12; actin-like prote 99.7 4.6E-18 1.6E-22 168.4 2.7 205 224-472 106-327 (329)
24 4fo0_A Actin-related protein 8 99.6 1.3E-13 4.5E-18 147.6 21.5 135 209-356 178-321 (593)
25 2d0o_A DIOL dehydratase-reacti 99.4 1.7E-13 5.8E-18 138.4 3.5 202 236-469 367-604 (610)
26 1nbw_A Glycerol dehydratase re 99.3 2.9E-12 9.9E-17 130.0 10.8 200 237-468 370-605 (607)
27 1hux_A Activator of (R)-2-hydr 98.8 1.1E-07 3.8E-12 90.9 16.1 72 392-470 186-257 (270)
28 2ews_A Pantothenate kinase; PA 98.2 6.9E-05 2.4E-09 71.6 18.0 47 418-467 236-286 (287)
29 4am6_A Actin-like protein ARP8 98.1 1.3E-05 4.5E-10 83.8 11.2 143 201-357 196-346 (655)
30 2ivn_A O-sialoglycoprotein end 97.0 0.16 5.5E-06 49.4 22.9 78 387-472 217-301 (330)
31 3eno_A Putative O-sialoglycopr 97.0 0.11 3.9E-06 50.5 21.4 82 387-473 222-307 (334)
32 3l0q_A Xylulose kinase; xlylul 96.9 0.0014 4.7E-08 69.0 7.6 88 384-475 408-495 (554)
33 3hz6_A Xylulokinase; xylulose, 96.7 0.0033 1.1E-07 65.5 8.3 81 386-475 375-456 (511)
34 3ll3_A Gluconate kinase; xylul 96.7 0.0025 8.5E-08 66.2 7.4 83 386-475 364-446 (504)
35 3i8b_A Xylulose kinase; strain 96.7 0.0019 6.6E-08 67.2 6.5 56 418-477 424-479 (515)
36 2zf5_O Glycerol kinase; hypert 96.6 0.0028 9.7E-08 65.7 7.4 77 393-474 369-445 (497)
37 4bc3_A Xylulose kinase; transf 96.6 0.0031 1.1E-07 66.0 7.5 79 391-473 407-485 (538)
38 3vgl_A Glucokinase; ROK family 96.5 0.46 1.6E-05 45.8 22.0 40 249-290 96-139 (321)
39 2itm_A Xylulose kinase, xylulo 96.5 0.0029 9.9E-08 65.4 6.5 84 386-475 357-440 (484)
40 3ezw_A Glycerol kinase; glycer 96.4 0.0048 1.7E-07 64.4 7.6 54 418-475 402-455 (526)
41 3g25_A Glycerol kinase; IDP007 96.4 0.003 1E-07 65.5 6.0 54 418-475 404-457 (501)
42 3h3n_X Glycerol kinase; ATP-bi 96.3 0.0038 1.3E-07 64.9 5.8 54 418-475 403-456 (506)
43 2i7n_A Pantothenate kinase 1; 96.3 0.024 8.1E-07 55.6 10.9 47 419-468 306-359 (360)
44 4e1j_A Glycerol kinase; struct 96.3 0.0028 9.5E-08 66.1 4.6 54 418-475 425-478 (520)
45 3ifr_A Carbohydrate kinase, FG 96.3 0.0064 2.2E-07 63.2 7.3 54 418-475 400-453 (508)
46 1t6c_A Exopolyphosphatase; alp 96.3 0.0063 2.2E-07 59.0 6.8 75 239-318 100-178 (315)
47 2p3r_A Glycerol kinase; glycer 96.2 0.0035 1.2E-07 65.2 5.2 54 418-475 401-454 (510)
48 3jvp_A Ribulokinase; PSI-II, N 96.2 0.004 1.4E-07 65.8 5.6 80 386-472 410-490 (572)
49 2e2o_A Hexokinase; acetate and 96.2 0.86 2.9E-05 43.2 23.2 49 418-470 239-288 (299)
50 3vov_A Glucokinase, hexokinase 96.2 0.21 7E-06 47.9 17.2 72 393-469 217-295 (302)
51 3r8e_A Hypothetical sugar kina 96.1 1.1 3.6E-05 43.2 22.2 48 418-468 260-318 (321)
52 2dpn_A Glycerol kinase; thermu 96.1 0.0087 3E-07 62.0 7.2 82 386-474 368-450 (495)
53 3zyy_X Iron-sulfur cluster bin 96.0 0.077 2.6E-06 55.8 13.9 57 382-439 499-555 (631)
54 2d4w_A Glycerol kinase; alpha 96.0 0.013 4.4E-07 60.8 7.9 53 418-474 403-455 (504)
55 2qm1_A Glucokinase; alpha-beta 95.9 0.41 1.4E-05 46.1 18.1 72 394-470 243-322 (326)
56 2w40_A Glycerol kinase, putati 95.9 0.0069 2.4E-07 62.9 5.4 53 418-474 406-459 (503)
57 3bex_A Type III pantothenate k 95.8 0.31 1.1E-05 45.2 15.9 21 87-107 4-24 (249)
58 3mdq_A Exopolyphosphatase; str 95.7 0.055 1.9E-06 52.3 10.9 74 239-317 92-170 (315)
59 3djc_A Type III pantothenate k 95.7 0.11 3.6E-06 48.9 12.3 20 87-106 3-22 (266)
60 2ch5_A NAGK protein; transfera 95.5 2 6.8E-05 41.5 27.4 60 222-285 70-133 (347)
61 3en9_A Glycoprotease, O-sialog 95.4 0.89 3.1E-05 47.3 19.5 188 222-448 72-281 (540)
62 4db3_A Glcnac kinase, N-acetyl 95.3 2.3 7.7E-05 41.0 22.5 51 418-468 269-325 (327)
63 2uyt_A Rhamnulokinase; rhamnos 94.7 0.032 1.1E-06 57.5 5.9 47 418-469 393-439 (489)
64 3cer_A Possible exopolyphospha 94.5 0.16 5.5E-06 49.6 10.0 77 239-317 105-191 (343)
65 2ap1_A Putative regulator prot 94.1 0.95 3.2E-05 43.6 14.6 40 249-290 120-163 (327)
66 1z6r_A MLC protein; transcript 93.9 2.6 8.8E-05 41.9 17.8 40 249-290 186-229 (406)
67 1u6z_A Exopolyphosphatase; alp 93.6 0.053 1.8E-06 56.2 4.7 73 239-317 99-176 (513)
68 2h3g_X Biosynthetic protein; p 92.5 0.55 1.9E-05 44.0 9.6 20 88-107 2-21 (268)
69 3h6e_A Carbohydrate kinase, FG 92.2 0.083 2.8E-06 54.3 3.7 72 391-470 362-436 (482)
70 3cet_A Conserved archaeal prot 92.1 0.78 2.7E-05 44.1 10.0 39 252-291 106-145 (334)
71 4g9i_A Hydrogenase maturation 88.9 1.3 4.6E-05 47.9 9.6 80 388-475 679-765 (772)
72 3hi0_A Putative exopolyphospha 88.6 2.3 7.9E-05 43.7 10.8 72 239-316 103-178 (508)
73 3o8m_A Hexokinase; rnaseh-like 88.3 1.2 4E-05 45.5 8.2 55 236-291 185-242 (485)
74 3vth_A Hydrogenase maturation 87.4 1.5 5.2E-05 47.3 8.8 73 399-476 679-754 (761)
75 3cqy_A Anhydro-N-acetylmuramic 86.5 0.95 3.2E-05 44.2 6.0 71 396-470 271-343 (370)
76 3ttc_A HYPF, transcriptional r 86.4 1.7 5.7E-05 46.0 8.3 78 387-469 572-651 (657)
77 1sz2_A Glucokinase, glucose ki 85.5 5.2 0.00018 38.4 11.0 44 247-291 99-156 (332)
78 2yhx_A Hexokinase B; transfera 84.7 2.6 9E-05 42.6 8.6 53 237-290 164-219 (457)
79 3epq_A Putative fructokinase; 82.1 4.7 0.00016 38.2 8.8 34 249-283 97-134 (302)
80 1bdg_A Hexokinase; phosphotran 81.4 8.4 0.00029 38.8 10.8 55 235-291 171-228 (451)
81 3ven_A O-carbamoyltransferase 80.6 5.4 0.00019 41.4 9.1 82 387-475 280-363 (576)
82 4htl_A Beta-glucoside kinase; 80.4 12 0.00042 35.1 11.1 53 418-470 237-292 (297)
83 1cza_N Hexokinase type I; stru 78.6 4.4 0.00015 44.9 8.2 50 235-285 630-683 (917)
84 4e1j_A Glycerol kinase; struct 78.2 1.7 5.7E-05 45.0 4.5 26 80-105 20-45 (520)
85 2hoe_A N-acetylglucosamine kin 77.3 26 0.0009 34.1 12.8 73 392-469 293-371 (380)
86 1iv0_A Hypothetical protein; r 77.0 1.8 6.2E-05 33.7 3.3 20 87-106 2-21 (98)
87 3hm8_A Hexokinase-3; glucose, 76.4 6.5 0.00022 39.4 8.0 50 237-287 161-214 (445)
88 1z05_A Transcriptional regulat 75.8 10 0.00036 37.7 9.5 40 249-290 208-251 (429)
89 3qbx_A Anhydro-N-acetylmuramic 74.1 5.4 0.00018 38.9 6.5 68 401-471 269-338 (371)
90 2yhw_A Bifunctional UDP-N-acet 73.6 18 0.00063 34.6 10.4 40 249-290 131-174 (343)
91 1nu0_A Hypothetical protein YQ 72.9 2.7 9.3E-05 34.9 3.5 22 86-107 3-24 (138)
92 3ll3_A Gluconate kinase; xylul 71.8 2.6 9E-05 43.3 3.9 22 85-106 3-24 (504)
93 4bc3_A Xylulose kinase; transf 71.1 2.9 0.0001 43.3 4.1 24 83-106 7-30 (538)
94 1zbs_A Hypothetical protein PG 70.8 31 0.001 32.1 11.0 69 394-471 212-282 (291)
95 1cza_N Hexokinase type I; stru 70.1 20 0.00068 39.6 10.7 54 236-291 183-240 (917)
96 3ifr_A Carbohydrate kinase, FG 69.6 3.3 0.00011 42.6 4.1 22 85-106 6-27 (508)
97 2uyt_A Rhamnulokinase; rhamnos 67.5 2.8 9.7E-05 42.8 3.1 20 85-104 3-22 (489)
98 3l0q_A Xylulose kinase; xlylul 67.4 3.9 0.00013 42.5 4.1 22 85-106 4-25 (554)
99 3ezw_A Glycerol kinase; glycer 66.8 3.7 0.00013 42.4 3.9 21 85-105 3-23 (526)
100 3i8b_A Xylulose kinase; strain 65.9 4.7 0.00016 41.5 4.4 20 85-104 4-23 (515)
101 2p3r_A Glycerol kinase; glycer 64.9 4.5 0.00015 41.5 4.0 21 85-105 2-22 (510)
102 3h6e_A Carbohydrate kinase, FG 64.7 3.8 0.00013 41.8 3.3 21 85-105 5-25 (482)
103 3hz6_A Xylulokinase; xylulose, 63.5 4.8 0.00016 41.4 3.9 21 86-106 5-25 (511)
104 3jvp_A Ribulokinase; PSI-II, N 63.5 4.6 0.00016 42.2 3.8 20 86-105 5-24 (572)
105 3h3n_X Glycerol kinase; ATP-bi 63.4 5.2 0.00018 41.0 4.1 22 85-106 4-25 (506)
106 2dpn_A Glycerol kinase; thermu 62.0 5 0.00017 41.0 3.7 21 86-106 2-22 (495)
107 2w40_A Glycerol kinase, putati 61.8 5.2 0.00018 41.0 3.8 21 86-106 4-24 (503)
108 1vhx_A Putative holliday junct 61.5 5.3 0.00018 33.7 3.1 20 87-106 4-23 (150)
109 1hjr_A Holliday junction resol 61.3 9 0.00031 32.5 4.5 18 87-104 2-19 (158)
110 3mdq_A Exopolyphosphatase; str 60.7 16 0.00055 34.8 6.8 91 16-108 60-153 (315)
111 2zf5_O Glycerol kinase; hypert 59.7 6.1 0.00021 40.4 3.9 20 86-105 3-22 (497)
112 3g25_A Glycerol kinase; IDP007 59.0 6.4 0.00022 40.3 3.9 20 86-105 6-25 (501)
113 1t6c_A Exopolyphosphatase; alp 58.2 14 0.00047 35.3 5.8 90 16-108 68-160 (315)
114 2gup_A ROK family protein; sug 58.1 27 0.00092 32.4 7.9 72 393-469 207-287 (292)
115 3cer_A Possible exopolyphospha 56.6 21 0.00072 34.4 6.9 89 16-105 73-165 (343)
116 4htl_A Beta-glucoside kinase; 55.6 24 0.00081 33.1 7.0 34 249-283 97-134 (297)
117 2d4w_A Glycerol kinase; alpha 54.7 8.3 0.00028 39.5 3.9 21 86-106 2-22 (504)
118 2itm_A Xylulose kinase, xylulo 53.8 8.3 0.00028 39.2 3.7 18 88-105 2-19 (484)
119 4ep4_A Crossover junction endo 53.2 13 0.00046 31.7 4.3 18 87-104 2-19 (166)
120 2aa4_A Mannac kinase, putative 48.8 17 0.00058 33.7 4.8 71 393-468 213-287 (289)
121 1nbw_A Glycerol dehydratase re 47.4 8.7 0.0003 39.5 2.5 28 225-252 132-159 (607)
122 1u6z_A Exopolyphosphatase; alp 46.3 46 0.0016 33.9 7.9 90 16-108 67-159 (513)
123 3f9m_A Glucokinase; hexokinase 46.0 37 0.0013 34.2 6.9 135 81-284 72-235 (470)
124 1zc6_A Probable N-acetylglucos 45.8 17 0.00057 34.2 4.2 64 394-469 228-293 (305)
125 2f9w_A Pantothenate kinase; CO 45.5 14 0.00048 34.4 3.5 23 84-106 21-44 (271)
126 3ist_A Glutamate racemase; str 43.1 50 0.0017 30.5 6.9 45 417-467 177-221 (269)
127 1zbs_A Hypothetical protein PG 42.4 6.1 0.00021 37.1 0.5 60 222-285 59-121 (291)
128 1zxo_A Conserved hypothetical 41.8 11 0.00039 35.2 2.3 66 396-468 212-277 (291)
129 1saz_A Probable butyrate kinas 41.7 39 0.0013 32.9 6.3 73 394-469 274-348 (381)
130 2e1z_A Propionate kinase; TDCD 40.9 28 0.00096 34.4 4.9 42 397-442 313-355 (415)
131 1zc6_A Probable N-acetylglucos 40.2 13 0.00044 35.0 2.4 55 224-285 77-134 (305)
132 4am6_A Actin-like protein ARP8 39.6 14 0.00049 38.7 2.7 23 420-442 502-524 (655)
133 2hoe_A N-acetylglucosamine kin 37.4 68 0.0023 31.1 7.3 40 249-290 188-229 (380)
134 3uhf_A Glutamate racemase; str 37.4 36 0.0012 31.7 4.9 43 418-466 196-238 (274)
135 1saz_A Probable butyrate kinas 37.2 27 0.00093 34.1 4.3 24 86-111 2-25 (381)
136 3htv_A D-allose kinase, alloki 35.9 67 0.0023 30.1 6.7 70 395-469 221-299 (310)
137 1g99_A Acetate kinase; alpha/b 34.6 53 0.0018 32.3 5.8 46 393-442 301-347 (408)
138 1hnj_A Beta-ketoacyl-acyl carr 34.4 50 0.0017 30.9 5.6 51 393-446 212-262 (317)
139 3aap_A Ectonucleoside triphosp 34.2 37 0.0013 32.8 4.6 18 86-103 3-20 (353)
140 3o8m_A Hexokinase; rnaseh-like 33.4 1.2E+02 0.0042 30.5 8.4 55 273-327 79-140 (485)
141 3epq_A Putative fructokinase; 32.9 1.1E+02 0.0038 28.5 7.7 69 396-469 207-289 (302)
142 1woq_A Inorganic polyphosphate 30.8 43 0.0015 30.6 4.3 40 249-290 114-158 (267)
143 1zxo_A Conserved hypothetical 30.7 3.5 0.00012 38.8 -3.4 57 224-284 59-118 (291)
144 3htv_A D-allose kinase, alloki 29.6 30 0.001 32.7 3.0 21 86-106 7-27 (310)
145 2yhw_A Bifunctional UDP-N-acet 29.5 1.1E+02 0.0038 28.9 7.2 22 85-106 29-50 (343)
146 3hi0_A Putative exopolyphospha 29.3 48 0.0016 33.8 4.7 89 16-108 71-162 (508)
147 1msz_A DNA-binding protein smu 29.1 38 0.0013 25.4 2.8 29 225-253 33-61 (86)
148 1ub7_A 3-oxoacyl-[acyl-carrier 28.5 65 0.0022 30.2 5.3 50 394-446 215-264 (322)
149 2ebd_A 3-oxoacyl-[acyl-carrier 28.3 69 0.0024 29.7 5.4 48 396-446 207-254 (309)
150 2yhx_A Hexokinase B; transfera 27.8 2.4E+02 0.0083 28.1 9.5 54 273-326 60-120 (457)
151 3nuw_A 2-OXO-3-deoxygalactonat 27.7 70 0.0024 30.0 5.1 46 420-470 248-293 (295)
152 1mzj_A Beta-ketoacylsynthase I 26.3 89 0.0031 29.5 5.9 50 395-447 227-276 (339)
153 3mcp_A Glucokinase; structural 25.8 53 0.0018 31.9 4.1 22 83-104 6-27 (366)
154 2q2r_A Glucokinase 1, putative 25.4 41 0.0014 32.5 3.3 21 85-105 28-48 (373)
155 1zow_A 3-oxoacyl-[acyl-carrier 24.8 99 0.0034 28.7 5.8 50 394-446 207-256 (313)
156 3qvl_A Putative hydantoin race 24.5 1.8E+02 0.0063 26.1 7.3 55 399-466 160-214 (245)
157 2oho_A Glutamate racemase; iso 24.3 1.4E+02 0.0046 27.4 6.5 58 402-468 171-228 (273)
158 2jfq_A Glutamate racemase; cel 24.1 1.4E+02 0.0047 27.7 6.5 58 403-468 183-240 (286)
159 2x3e_A 3-oxoacyl-[acyl-carrier 24.0 96 0.0033 29.2 5.6 49 395-446 220-268 (331)
160 3zyy_X Iron-sulfur cluster bin 23.1 1.4E+02 0.0048 31.2 6.9 36 395-430 266-301 (631)
161 2q2r_A Glucokinase 1, putative 22.9 81 0.0028 30.4 4.9 18 249-266 127-144 (373)
162 2gup_A ROK family protein; sug 22.8 45 0.0015 30.8 2.9 42 247-290 92-135 (292)
163 2gzm_A Glutamate racemase; enz 22.3 1.3E+02 0.0045 27.4 6.0 45 418-468 176-220 (267)
164 2vvt_A Glutamate racemase; iso 22.3 1.1E+02 0.0038 28.4 5.5 59 402-468 183-241 (290)
165 2dwu_A Glutamate racemase; iso 21.7 85 0.0029 28.9 4.5 44 418-467 180-223 (276)
166 3kbq_A Protein TA0487; structu 21.2 1.4E+02 0.0046 25.5 5.3 42 400-448 51-94 (172)
167 2iir_A Acetate kinase; transfe 20.1 1.2E+02 0.004 29.9 5.1 47 393-443 301-348 (403)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=4.4e-65 Score=545.79 Aligned_cols=375 Identities=41% Similarity=0.642 Sum_probs=355.8
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG 165 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 165 (493)
+.+||||||||||+||++.+|.|+++.|..|++ ++||+|+|.++|+++||..|..+...+|.++++++|+++|
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~-------~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG 74 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDR-------TTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIG 74 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCS-------SEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTT
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCc-------ccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhC
Confidence 469999999999999999999999999999999 9999999998889999999999999999999999999999
Q ss_pred CCCCCchhhcc---cCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 036352 166 TVYDSSKVQTS---LYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAI 242 (493)
Q Consensus 166 ~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l 242 (493)
+.++++.++.+ +||++...++|.+.+.++++.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++
T Consensus 75 ~~~~d~~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~ 154 (605)
T 4b9q_A 75 RRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (605)
T ss_dssp CBTTSHHHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred CCCCCHHHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 99999988876 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeeeccchHHHHHHhcccCC--CCeEEEEEeC-CeeEEEEEEEeC----CeEEEEEecCCCCCchHHHHH
Q 036352 243 KYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSFG-GTFEFSILEISN----GVIKVKAKRKSLSHGGLDFDL 315 (493)
Q Consensus 243 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~vlVvDiG-gTtdvsv~~~~~----~~~~vl~~~~~~~~GG~~id~ 315 (493)
++|++.||++++++++||+|||++|+.... +.+++|||+| ||+|++++++.+ +.++++++.++..+||++||+
T Consensus 155 ~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~ 234 (605)
T 4b9q_A 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHH
T ss_pred HHHHHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHH
Confidence 999999999999999999999999988764 6799999999 999999999988 899999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHH
Q 036352 316 LLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVS 395 (493)
Q Consensus 316 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~ 395 (493)
.|++|+..+|+++++.++..+++.+.+|+.+||++|+.|+......+.++.+..+. .++.++.++|+|++|+++++
T Consensus 235 ~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~----~g~~~~~~~itr~~~e~l~~ 310 (605)
T 4b9q_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADA----TGPKHMNIKVTRAKLESLVE 310 (605)
T ss_dssp HHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECS----SSEEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCC----CCCeeEEEEEeHHHHHHHHH
Confidence 99999999999999999989999999999999999999999999999888765431 23467889999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccC
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVN 474 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~ 474 (493)
++++++...++++|+.+++...+|+.|+||||+|++|+|++.|++.||.++.. +.||+++||.|||++|+.++|..
T Consensus 311 ~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~---~~nPdeaVA~GAai~a~~l~~~~ 386 (605)
T 4b9q_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQGGVLTGDV 386 (605)
T ss_dssp HHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCS---SSCTTTHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCC---CcChhHHHHHhHHHHHHHhcCCC
Confidence 99999999999999999999899999999999999999999999999999988 99999999999999999999874
No 2
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.6e-64 Score=543.67 Aligned_cols=373 Identities=27% Similarity=0.401 Sum_probs=349.5
Q ss_pred ceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhCC
Q 036352 87 NVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVGT 166 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~ 166 (493)
.+||||||||||+||++.+|.++++.|..|++ .+||+|+|.++ +++||..|..+...+|.++++++|+++|+
T Consensus 3 ~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r-------~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~ 74 (675)
T 3d2f_A 3 TPFGLDLGNNNSVLAVARNRGIDIVVNEVSNR-------STPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGL 74 (675)
T ss_dssp CCEEEECCSSEEEEEEEETTEEEEECCTTSCS-------SEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTC
T ss_pred cEEEEEcCCCcEEEEEEECCeeEEEECCCCCc-------ccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCC
Confidence 49999999999999999999999999999999 99999999865 78999999999999999999999999999
Q ss_pred CCCCchhhcc---cCCeEEeCCCCceEEEeC--C--eEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHH
Q 036352 167 VYDSSKVQTS---LYPKIVRGFKGEAWVETE--F--GIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQR 239 (493)
Q Consensus 167 ~~~~~~~~~~---~p~~~~~~~~g~~~~~~~--~--~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r 239 (493)
.++++.++.+ +||++....+|.+.+.++ + +.++|+++++++|++|++.++.+++.++..+|||||++|++.||
T Consensus 75 ~~~d~~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR 154 (675)
T 3d2f_A 75 DYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQR 154 (675)
T ss_dssp BTTCTTHHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHH
T ss_pred CCCcHHHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHH
Confidence 9999888755 899999988999888764 3 67999999999999999999999998889999999999999999
Q ss_pred HHHHHHHHHcCCCeeeeccchHHHHHHhcccC--------CCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCch
Q 036352 240 EAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK--------RDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGG 310 (493)
Q Consensus 240 ~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--------~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG 310 (493)
+++++|++.||++++++++||+|||++|+... .+.+++|||+| ||+|++++++.++.++++++.++..+||
T Consensus 155 ~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG 234 (675)
T 3d2f_A 155 YNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGG 234 (675)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSH
T ss_pred HHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccH
Confidence 99999999999999999999999999998743 26789999999 9999999999999999999999899999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHH
Q 036352 311 LDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEF 390 (493)
Q Consensus 311 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~ 390 (493)
++||+.|++|+..+|++++++++..+++.+.+|+.+||++|+.||...+..+.++.+.++ .++.+.|+|++|
T Consensus 235 ~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g--------~~~~~~itr~~f 306 (675)
T 3d2f_A 235 RDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMND--------VDVSSQLSREEL 306 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSS--------CCEEEEEEHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccC--------ceEEEEEeHHHH
Confidence 999999999999999999999988899999999999999999999988888888877766 678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 391 ESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 391 e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
+++++++++++...++++|+.++++..+|+.|+|+||+|++|+|++.|++.||.++.. +.||+++||+|||++|+.+
T Consensus 307 e~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~---~~nPdeaVA~GAa~~a~~l 383 (675)
T 3d2f_A 307 EELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLST---TLNQDEAIAKGAAFICAIH 383 (675)
T ss_dssp HHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEEC---CSCTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccc---cCCcchHHHHHHHHHHHHh
Confidence 9999999999999999999999998889999999999999999999999999988877 8999999999999999999
Q ss_pred cccCCCCC
Q 036352 471 RYVNRREP 478 (493)
Q Consensus 471 ~~~~~~~~ 478 (493)
++.++.++
T Consensus 384 s~~~~v~~ 391 (675)
T 3d2f_A 384 SPTLRVRP 391 (675)
T ss_dssp CSSCCCCC
T ss_pred CCCCcccc
Confidence 99876554
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.9e-64 Score=538.45 Aligned_cols=374 Identities=41% Similarity=0.655 Sum_probs=350.1
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG 165 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 165 (493)
+.+||||||||||+||++.+|.++++.|+.|++ ++||+|+|.++|+++||..|..+...+|.++++++|+++|
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~-------~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG 74 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDR-------TTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIG 74 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCS-------SEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCc-------ccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhC
Confidence 358999999999999999999999999999999 9999999988889999999999999999999999999999
Q ss_pred CCCCCchhhcc---cCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 036352 166 TVYDSSKVQTS---LYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAI 242 (493)
Q Consensus 166 ~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l 242 (493)
+.++++.++.+ +||+++.+.+|.+.+.++++.++|+++++++|++|++.++.+++.++..+|||||++|++.||+++
T Consensus 75 ~~~~d~~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~ 154 (605)
T 2kho_A 75 RRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (605)
T ss_dssp CBSSSTTHHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHH
T ss_pred CCCCcHHHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHH
Confidence 99988877765 899999889999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHHcCCCeeeeccchHHHHHHhcccCC--CCeEEEEEeC-CeeEEEEEEEe----CCeEEEEEecCCCCCchHHHHH
Q 036352 243 KYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSFG-GTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDL 315 (493)
Q Consensus 243 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~vlVvDiG-gTtdvsv~~~~----~~~~~vl~~~~~~~~GG~~id~ 315 (493)
++|++.||++++++++||+|||++|+.+.. +.+++|||+| ||+|++++++. ++.++++++.++..+||++||+
T Consensus 155 ~~A~~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~ 234 (605)
T 2kho_A 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (605)
T ss_dssp HHHHHTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHH
T ss_pred HHHHHHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHH
Confidence 999999999999999999999999988763 6789999999 99999999998 7899999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHH
Q 036352 316 LLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVS 395 (493)
Q Consensus 316 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~ 395 (493)
.|++|+.++|+++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.++.+ ++.++.++|+|++|+++++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~----G~~~~~~~itr~~fe~l~~ 310 (605)
T 2kho_A 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADAT----GPKHMNIKVTRAKLESLVE 310 (605)
T ss_dssp HHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETT----EEEEEEEEEEHHHHHTTCC
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCC----CceEEEEEEeHHHHHHHHH
Confidence 999999999999999999999999999999999999999999988888887664311 2356788999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhccc
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYV 473 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~ 473 (493)
|+++++...++++|+.+++...+|+.|+||||+|++|+|++.|++.||.++.. ..||+++||.|||++|+.++|.
T Consensus 311 ~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~---~~npd~aVA~GAa~~a~~l~~~ 385 (605)
T 2kho_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQGGVLTGD 385 (605)
T ss_dssp STTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBC---SSCTTTHHHHHHHHHHTTTTTS
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCc---CCCcchHHHHHHHHHHHHhcCC
Confidence 99999999999999999998889999999999999999999999999988888 8999999999999999999886
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.4e-63 Score=524.23 Aligned_cols=370 Identities=37% Similarity=0.593 Sum_probs=345.0
Q ss_pred CCCceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhh
Q 036352 84 SQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHL 163 (493)
Q Consensus 84 ~~~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~ 163 (493)
.++.+||||||||||+||++.+|.++++.|+.|++ ++||+|+|.++ +++||.+|..+...+|.++++++|++
T Consensus 2 ~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~-------~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~Krl 73 (554)
T 1yuw_A 2 SKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNR-------TTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRL 73 (554)
T ss_dssp CSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCS-------EEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGT
T ss_pred CCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCe-------ecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHh
Confidence 34569999999999999999999999999999999 99999999865 78999999999999999999999999
Q ss_pred hCCCCCCchhhcc---cCCeEEeCCCCceEEEeC----CeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCH
Q 036352 164 VGTVYDSSKVQTS---LYPKIVRGFKGEAWVETE----FGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNE 236 (493)
Q Consensus 164 lg~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~----~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~ 236 (493)
+|+.++++.++.+ +||+++. .+|.+.+.++ .+.++|+++++++|++|++.++.+++.++..+|||||++|++
T Consensus 74 lG~~~~d~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~ 152 (554)
T 1yuw_A 74 IGRRFDDAVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFND 152 (554)
T ss_dssp TTCCSSCSHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCH
T ss_pred cCCCCCcHHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCH
Confidence 9999999888765 8999884 4788777664 368999999999999999999999999899999999999999
Q ss_pred HHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCC---CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHH
Q 036352 237 AQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR---DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLD 312 (493)
Q Consensus 237 ~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~---~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~ 312 (493)
.||+++++|++.||++++.+++||+|||++|+.+.. +..++|||+| ||+|++++++.++.++++++.++..+||++
T Consensus 153 ~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d 232 (554)
T 1yuw_A 153 SQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGED 232 (554)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHH
T ss_pred HHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHH
Confidence 999999999999999999999999999999988753 6789999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHH
Q 036352 313 FDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFES 392 (493)
Q Consensus 313 id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~ 392 (493)
||+.|++++..+|+++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.++ .++...++|++|++
T Consensus 233 ~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g--------~~~~~~ltr~~~e~ 304 (554)
T 1yuw_A 233 FDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG--------IDFYTSITRARFEE 304 (554)
T ss_dssp HHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS--------CCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC--------ceEEEEEEHHHHHH
Confidence 9999999999999999999998899999999999999999999999888998877766 67889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhC-CCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFG-KSPLKSPRGVTPDEAVVIGAAIHGEKFR 471 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg-~~~~~~~~~~~p~~aVA~GAa~~a~~~~ 471 (493)
+++++++++.+.++++|+.+++...+|+.|+|+||+|++|+|++.|++.|+ .++.. +.||+++||.|||++|+.++
T Consensus 305 l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~---~~np~~aVA~Gaa~~a~~l~ 381 (554)
T 1yuw_A 305 LNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNK---SINPDEAVAYGAAVQAAILS 381 (554)
T ss_dssp HTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBC---CSCTTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCcccc---CCCchhHHHHHHHHHHHHhc
Confidence 999999999999999999999988899999999999999999999999995 77777 89999999999999999998
Q ss_pred cc
Q 036352 472 YV 473 (493)
Q Consensus 472 ~~ 473 (493)
|.
T Consensus 382 ~~ 383 (554)
T 1yuw_A 382 GD 383 (554)
T ss_dssp SC
T ss_pred CC
Confidence 85
No 5
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=6.2e-61 Score=492.46 Aligned_cols=369 Identities=37% Similarity=0.582 Sum_probs=343.5
Q ss_pred CCceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhh
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLV 164 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~l 164 (493)
++.+||||||||||+||++.+|.++++.|+.|++ ++||+|+|.++ +++||.+|..+...+|.++++++|+++
T Consensus 22 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~-------~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~Kr~l 93 (404)
T 3i33_A 22 SMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNR-------TTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIFDAKRLI 93 (404)
T ss_dssp -CCCEEEEECSSEEEEEEEETTEEEECCCTTSCS-------SEECCEEECSS-CEEETHHHHHTTTTCSTTEECCGGGTT
T ss_pred cCCEEEEEcCCccEEEEEEECCeeEEEECCCCCc-------ccceEEEECCC-CEEecHHHHHhhHhChhhhHHHHHHHh
Confidence 3569999999999999999999999999999999 99999999876 899999999999999999999999999
Q ss_pred CCCCCCchhhcc---cCCeEEeCCCCceEEEeC--C--eEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHH
Q 036352 165 GTVYDSSKVQTS---LYPKIVRGFKGEAWVETE--F--GIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEA 237 (493)
Q Consensus 165 g~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~--~--~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~ 237 (493)
|+.++++.++.+ +||.+.. .+|.+.+.+. + ..++++++++++|++|++.++.+++.++..+|||||++|++.
T Consensus 94 g~~~~~~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~ 172 (404)
T 3i33_A 94 GRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDS 172 (404)
T ss_dssp TCCTTSHHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHH
T ss_pred CCCCCcHHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHH
Confidence 999999887765 8999876 6777776653 4 789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCC-----CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchH
Q 036352 238 QREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-----DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGL 311 (493)
Q Consensus 238 ~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-----~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~ 311 (493)
+|+++++|++.||++++.+++||+|||++|+.... +..++|||+| ||+|++++++.++.+++++..++..+||+
T Consensus 173 ~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~ 252 (404)
T 3i33_A 173 QRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGE 252 (404)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHH
Confidence 99999999999999999999999999999987653 6789999999 99999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHH
Q 036352 312 DFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFE 391 (493)
Q Consensus 312 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e 391 (493)
+||+.|++++.++++++++.++..+++...+|+.+||++|+.|+......+.++.+.++ .++.+.++|++|+
T Consensus 253 ~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g--------~~~~~~i~r~~~~ 324 (404)
T 3i33_A 253 DFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG--------VDFYTSITRARFE 324 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT--------EEEEEEEEHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC--------ceeEEEEcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998877776 7789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh-CCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 392 SLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF-GKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 392 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-g~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
+++++.++++.+.|+++|+.++....+|+.|+|+||+|++|+|++.|++.| +.++.. +.||+++||.|||++|+.+
T Consensus 325 ~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~---~~~p~~ava~Gaa~~a~~l 401 (404)
T 3i33_A 325 ELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNK---SINPDEAVAYGAAVQAAIL 401 (404)
T ss_dssp HHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBC---SSCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCC---CcCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999988889999999999999999999999999 788877 8999999999999999999
Q ss_pred ccc
Q 036352 471 RYV 473 (493)
Q Consensus 471 ~~~ 473 (493)
+|+
T Consensus 402 ~~~ 404 (404)
T 3i33_A 402 IGD 404 (404)
T ss_dssp C--
T ss_pred cCC
Confidence 874
No 6
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=1.9e-60 Score=485.52 Aligned_cols=372 Identities=41% Similarity=0.669 Sum_probs=341.1
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG 165 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 165 (493)
+.+||||||||||+||++.+|.++++.|+.|.+ ++||+|+|+++++++||.+|..+...+|.++++++|+++|
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~-------~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 74 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDR-------TTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIG 74 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCS-------EEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTT
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCc-------ccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhC
Confidence 358999999999999999999999999999998 9999999988888999999999999999999999999999
Q ss_pred CCCCCchhhcc---cCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHH
Q 036352 166 TVYDSSKVQTS---LYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAI 242 (493)
Q Consensus 166 ~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l 242 (493)
+.++++.++.. +||.+..+.+|.+.+.++++.++++++++++|+++++.++.+++.++..+|+|||++|++.+|+++
T Consensus 75 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~ 154 (383)
T 1dkg_D 75 RRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQAT 154 (383)
T ss_dssp CBSCSHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHH
T ss_pred CCCCcHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 99988777654 799998888999999999999999999999999999999999988889999999999999999999
Q ss_pred HHHHHHcCCCeeeeccchHHHHHHhcccC--CCCeEEEEEeC-CeeEEEEEEEe----CCeEEEEEecCCCCCchHHHHH
Q 036352 243 KYAGDIAGLDIQGVVEDPVAAALAYGLDK--RDGLFAVYSFG-GTFEFSILEIS----NGVIKVKAKRKSLSHGGLDFDL 315 (493)
Q Consensus 243 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--~~~~vlVvDiG-gTtdvsv~~~~----~~~~~vl~~~~~~~~GG~~id~ 315 (493)
++|++.||++.+.+++||+|||++|+... ++.+++|||+| ||||+++++.. ++.++++++.++..+||++||+
T Consensus 155 ~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 155 KDAGRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HHHHHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HHHHHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999999998765 26789999999 99999999998 6788898888888999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHH
Q 036352 316 LLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVS 395 (493)
Q Consensus 316 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~ 395 (493)
.|++++.+++.++++.++..+++.+.+|+..||++|+.|+......+.++.+.+..+ ++.++.+.|+|++|+++++
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~----G~~~~~~~it~~~~~~~~~ 310 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADAT----GPKHMNIKVTRAKLESLVE 310 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETT----EEEEEEEEEEHHHHHHHSH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCC----CCeeEEEEEeHHHHHHHHH
Confidence 999999999999889888888999999999999999999998888888876554211 1255678999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFR 471 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~ 471 (493)
|.++++.+.++++|+.+++...+++.|+|+||+|++|+|++.|++.|+.++.. +.||+++||.|||++|+.++
T Consensus 311 ~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~---~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 311 DLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRK---DVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBC---SSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCC---CcChHHHHHHHHHHHHHhhC
Confidence 99999999999999999988889999999999999999999999999988887 89999999999999998764
No 7
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.4e-60 Score=490.51 Aligned_cols=372 Identities=22% Similarity=0.364 Sum_probs=336.2
Q ss_pred CCCceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhh
Q 036352 84 SQGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHL 163 (493)
Q Consensus 84 ~~~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~ 163 (493)
.++.+||||||||+|+||++.++.++++.|+.|.+ ++||+|+|.+ ++++||.+|..+..++|.+++.++|++
T Consensus 11 m~~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~-------~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~l 82 (409)
T 4gni_A 11 GERVVIGITFGNSNSSIAHTVDDKAEVIANEDGDR-------QIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDI 82 (409)
T ss_dssp --CCEEEEEECSSEEEEEEEETTEEEEECCTTSCS-------SEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGG
T ss_pred CCCcEEEEEcCCCeEEEEEEeCCceEEEECCCCCc-------cCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHH
Confidence 34679999999999999999888999999999999 9999999985 489999999999999999999999999
Q ss_pred hCCCCCCchhhcc-cCCeEEeCCCCceEEEeCC--------eEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCC
Q 036352 164 VGTVYDSSKVQTS-LYPKIVRGFKGEAWVETEF--------GIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACF 234 (493)
Q Consensus 164 lg~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~--------~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~ 234 (493)
+|+.++++..+.. .++.+. ..+|.+.+.++. +.++++++++++|++|++.++.+++.++..+|+|||++|
T Consensus 83 lg~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~ 161 (409)
T 4gni_A 83 LGQDFKSVDPTHNHASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNF 161 (409)
T ss_dssp TTCCGGGCCCGGGTTSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTC
T ss_pred hCCCccchhhhhhcccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCC
Confidence 9999887766554 344432 357888887653 589999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccC---C-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCc
Q 036352 235 NEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK---R-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHG 309 (493)
Q Consensus 235 ~~~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~---~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~G 309 (493)
++.+|+++++|++.||++++.+++||+|||++|+... + +..++|||+| ||+|++++++.++.++++++.++..+|
T Consensus 162 ~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lG 241 (409)
T 4gni_A 162 TEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYH 241 (409)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSS
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcC
Confidence 9999999999999999999999999999999999874 2 7799999999 999999999999999999998889999
Q ss_pred hHHHHHHHHHHHHHHHhhhcc--CCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcH
Q 036352 310 GLDFDLLLVRHLWREFTRCHA--FDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITR 387 (493)
Q Consensus 310 G~~id~~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr 387 (493)
|++||+.|++++..+|.++++ .++..+++.+.+|+.+||++|+.|+......+.++.+.++ .++.+.|+|
T Consensus 242 G~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~--------~~~~~~itr 313 (409)
T 4gni_A 242 GIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG--------LDFASTINR 313 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT--------EEEEEEEEH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC--------cceEEEeeH
Confidence 999999999999999998888 7777889999999999999999999999999999887776 778999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC--------CCCCCCCChhHHH
Q 036352 388 SEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP--------LKSPRGVTPDEAV 459 (493)
Q Consensus 388 ~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~--------~~~~~~~~p~~aV 459 (493)
++|++++++.++++.+.|+++|+.++....+|+.|+|+||+|++|+|++.|++.|+.++ .. ..||+++|
T Consensus 314 ~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~---~~~p~~av 390 (409)
T 4gni_A 314 LRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPS---ALNPSELQ 390 (409)
T ss_dssp HHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTT---CCCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCC---CcCHHHHH
Confidence 99999999999999999999999999888899999999999999999999999998763 45 79999999
Q ss_pred HhhHHHHHhhhcccCC
Q 036352 460 VIGAAIHGEKFRYVNR 475 (493)
Q Consensus 460 A~GAa~~a~~~~~~~~ 475 (493)
|.|||++|+.....++
T Consensus 391 a~GAa~~~~~~~~~~~ 406 (409)
T 4gni_A 391 ARGAALQASLIQEHHH 406 (409)
T ss_dssp HHHHHHHHHHHHC---
T ss_pred HHHHHHHhhhhhhhhc
Confidence 9999999998876654
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=9.7e-60 Score=482.00 Aligned_cols=367 Identities=40% Similarity=0.646 Sum_probs=343.4
Q ss_pred CCceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhh
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLV 164 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~l 164 (493)
+..+||||||||+|+||++.+|.++++.|+.|++ ++||+|+|.++ +++||..|..+...+|.++++++|+++
T Consensus 17 ~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~-------~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~l 88 (394)
T 3qfu_A 17 YGTVIGIDLGTTYSCVAVMKNGKTEILANEQGNR-------ITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLI 88 (394)
T ss_dssp CCSCEEEEECSSEEEEEEECSSCEEECCCTTSCS-------SEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTT
T ss_pred CCCEEEEEeCcCcEEEEEEECCeeEEEECCCCCE-------eeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHh
Confidence 3569999999999999999999999999999999 99999999876 899999999999999999999999999
Q ss_pred CCCCCCchhhcc---cCCeEEeCCCCceEEEeC--C--eEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHH
Q 036352 165 GTVYDSSKVQTS---LYPKIVRGFKGEAWVETE--F--GIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEA 237 (493)
Q Consensus 165 g~~~~~~~~~~~---~p~~~~~~~~g~~~~~~~--~--~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~ 237 (493)
|++++++.++.. +||.+. +.+|.+.+.+. + +.++++++++++|++|++.++.+++.++..+|||||++|++.
T Consensus 89 g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~ 167 (394)
T 3qfu_A 89 GLKYNDRSVQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDA 167 (394)
T ss_dssp TCCTTCHHHHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHH
T ss_pred CCCCCcHHHHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHH
Confidence 999999888766 899887 56777777654 3 689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCC--CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHH
Q 036352 238 QREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR--DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFD 314 (493)
Q Consensus 238 ~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~--~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id 314 (493)
+|+++++|++.||++++.+++||+|||++|+.... +..++|||+| ||||++++++.++.+++++..++..+||.+||
T Consensus 168 ~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d 247 (394)
T 3qfu_A 168 QRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFD 247 (394)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHH
Confidence 99999999999999999999999999999977654 7799999999 99999999999999999999998999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHH
Q 036352 315 LLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLV 394 (493)
Q Consensus 315 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~ 394 (493)
+.|++++.+++.++++.++..+++...+|+.+||++|+.|+......+.++.+.++ .++.+.++|++|++++
T Consensus 248 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~--------~~~~~~i~r~~~~~~~ 319 (394)
T 3qfu_A 248 YKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG--------IDLSETLTRAKFEELN 319 (394)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT--------EEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC--------ceeEEEEEHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877776 7788999999999999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh-CCCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352 395 SELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF-GKSPLKSPRGVTPDEAVVIGAAIHGEKFR 471 (493)
Q Consensus 395 ~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-g~~~~~~~~~~~p~~aVA~GAa~~a~~~~ 471 (493)
++.++++.+.|.++|+.++....+++.|+|+||+|++|+|++.|++.| +.++.. +.||+++||.|||++|+.++
T Consensus 320 ~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~---~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 320 LDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASK---GINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBC---CSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCC---CcCHHHHHHHHHHHHHHhhC
Confidence 999999999999999999988889999999999999999999999999 788887 89999999999999999864
No 9
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.1e-58 Score=487.91 Aligned_cols=351 Identities=43% Similarity=0.638 Sum_probs=323.9
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG 165 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 165 (493)
+.+||||||||||+||++.+|.|+++.|+.|++ ++||+|+| .+++++||++|..+...+| +++.++|+++|
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~-------~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg 72 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNR-------TTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMG 72 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCS-------SEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTT
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCc-------ccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcC
Confidence 359999999999999999999999999999999 99999999 5668999999999998999 99999999999
Q ss_pred CCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHH
Q 036352 166 TVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYA 245 (493)
Q Consensus 166 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l~~a 245 (493)
++ |+ +.++++.++++++.+++|++|++.++.+++.++..+|||||++|++.||+++++|
T Consensus 73 ~p-----------~~----------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a 131 (509)
T 2v7y_A 73 TD-----------YK----------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDA 131 (509)
T ss_dssp SC-----------CC----------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred CC-----------cE----------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 73 22 2345668899999999999999999999998889999999999999999999999
Q ss_pred HHHcCCCeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHH
Q 036352 246 GDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWR 323 (493)
Q Consensus 246 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~ 323 (493)
++.||++++.+++||+|||++|+.+.+ +.+++|||+| ||+|++++++.++.++++++.++..+||++||+.|++++.+
T Consensus 132 ~~~AGl~~~~li~Ep~AAAlay~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~ 211 (509)
T 2v7y_A 132 GRIAGLEVERIINEPTAAALAYGLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVN 211 (509)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHH
T ss_pred HHHcCCCeEEEecCHHHHHHHHhhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHH
Confidence 999999999999999999999998765 7799999999 99999999999999999999998999999999999999999
Q ss_pred HHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHH
Q 036352 324 EFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGA 403 (493)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~ 403 (493)
+|+++++.++..+++.+.+|+.+||++|+.|+...+..+.++.+.++.+ |+.++.+.|+|++|+++++|+++++.+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~----G~~~~~~~itr~~fe~l~~~~~~~i~~ 287 (509)
T 2v7y_A 212 QFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANEN----GPLHLEMTLTRAKFEELSAHLVERTMG 287 (509)
T ss_dssp HHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETT----EEEEEEEEEEHHHHHHHTHHHHHTTHH
T ss_pred HHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCC----CCeeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 9999999888888999999999999999999999888888887654311 235678899999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhccc
Q 036352 404 ICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYV 473 (493)
Q Consensus 404 ~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~ 473 (493)
.++++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.++.. +.||+++||.|||++|+.++|.
T Consensus 288 ~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~---~~~p~~aVa~Gaa~~a~~l~~~ 354 (509)
T 2v7y_A 288 PVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHK---GVNPDEVVAIGAAIQGGVIAGE 354 (509)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBC---CSCTTTHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCc---CCCchhhhHhhHHHHHHHhcCC
Confidence 999999999988889999999999999999999999999988887 8999999999999999999886
No 10
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=8.8e-42 Score=342.56 Aligned_cols=311 Identities=22% Similarity=0.267 Sum_probs=239.8
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccC-Cc-ceecHhHhhhhhcCcCchhhcchhh
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPN-GE-SWVGRQANMMTSLYPSRALFDTKHL 163 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~-~~-~~~G~~A~~~~~~~~~~~~~~~k~~ 163 (493)
+.+|||||||++|++++..+ ..++ .+||+|+|+++ ++ +.+|++|..+..++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~--~~~~--------------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~---- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGK--GIVV--------------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI---- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTT--EEEE--------------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE----
T ss_pred CceEEEEcCcCcEEEEECCC--CEEE--------------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE----
Confidence 35999999999999987533 2344 57999999876 55 479999998877777665321
Q ss_pred hCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHH
Q 036352 164 VGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIK 243 (493)
Q Consensus 164 lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l~ 243 (493)
.|++ +| .+...+....++.++++.+..........+|||+|++|++.+|++++
T Consensus 63 -------------~p~~-----~g---------~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 63 -------------RPMR-----DG---------VIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp -------------CCEE-----TT---------EESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHH
T ss_pred -------------ecCC-----CC---------eeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHH
Confidence 1111 22 22333444555555555443311112378999999999999999999
Q ss_pred HHHHHcCCCeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHH
Q 036352 244 YAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHL 321 (493)
Q Consensus 244 ~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l 321 (493)
+|++.||++.+.+++||+|||++|+...+ +.+++|||+| ||||+++++.+... ..++..+||++||+.|.+++
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggttdvsv~~~~~~~-----~~~~~~lGG~~id~~l~~~l 190 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGTTEVAVISLGSIV-----TWESIRIAGDEMDEAIVQYV 190 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSCEEEEEEETTEEE-----EEEEESCSHHHHHHHHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCeEEEEEEEcCCEE-----eeCCCCccChhHHHHHHHHH
Confidence 99999999999999999999999987655 6789999999 99999999865322 34557999999999999999
Q ss_pred HHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCc------eEEEEec--ccchhhhccccccceEEEEcHHHHHHH
Q 036352 322 WREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQ------VEVKLHN--LLNIQVKKSLVQKDLEVTITRSEFESL 393 (493)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~------~~~~i~~--~~~~~~~~~~~~~~~~~~itr~~~e~~ 393 (493)
.+++ +.++. +..||++|+.++.... ..+.++. +.++ .+..++|+|++|+++
T Consensus 191 ~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g--------~~~~~~i~~~~~~~~ 249 (344)
T 1jce_A 191 RETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTG--------LPRKLTLKGGEVREA 249 (344)
T ss_dssp HHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTT--------EEEEEEEEHHHHHHH
T ss_pred HHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCC--------CceeEEEeHHHHHHH
Confidence 8774 43332 3789999999987642 3444442 2233 456889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCC--CCCC-CEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 394 VSELIEETGAICQKCLEVANIT--RKDL-DGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~--~~~i-~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
++|.++++.+.|+++|+.++.+ ...+ +.|+|+||+|++|+|++.|++.|+.++.. +.||+++||.||+++|..+
T Consensus 250 ~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~---~~~p~~ava~Gaa~~a~~~ 326 (344)
T 1jce_A 250 LRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIR---SEEPLTAVAKGAGMVLDKV 326 (344)
T ss_dssp THHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEE---CSSTTTHHHHHHHHGGGCH
T ss_pred HHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccc---cCChHHHHHHHHHHHHhCh
Confidence 9999999999999999987532 1223 68999999999999999999999988877 8899999999999999875
Q ss_pred cc
Q 036352 471 RY 472 (493)
Q Consensus 471 ~~ 472 (493)
+.
T Consensus 327 ~~ 328 (344)
T 1jce_A 327 NI 328 (344)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 11
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.95 E-value=2e-26 Score=223.14 Aligned_cols=204 Identities=25% Similarity=0.300 Sum_probs=173.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCCHHHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCCCCeEEE
Q 036352 199 SPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFNEAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAV 278 (493)
Q Consensus 199 ~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~~~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlV 278 (493)
...+.....|+++++.++...+.....+++++|+.|+..+|+.++++++.+|++...++.||+|++++++.. ..+|
T Consensus 68 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~----~~~v 143 (272)
T 3h1q_A 68 VDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN----DGIV 143 (272)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----SEEE
T ss_pred EcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----CEEE
Confidence 445567788899998888887877889999999999999999999999999999999999999999998864 4699
Q ss_pred EEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC
Q 036352 279 YSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSE 357 (493)
Q Consensus 279 vDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~ 357 (493)
+|+| |||+++++. ++... .....++||.+||+.+.+++... .+.+|++|+.++
T Consensus 144 iDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~~~-------------------~~~ae~~k~~~~-- 197 (272)
T 3h1q_A 144 VDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYKIP-------------------FEEAETIKKDFS-- 197 (272)
T ss_dssp EEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHTCC-------------------HHHHHHHHHSST--
T ss_pred EEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhCCC-------------------HHHHHHHHHhcC--
Confidence 9999 999999886 33322 34668999999999999876411 267899998754
Q ss_pred CceEEEEecccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHH
Q 036352 358 PQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREY 437 (493)
Q Consensus 358 ~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~ 437 (493)
+++++++++.+.++++.+.+.+.++..+ +++.|+|+||++++|++++.
T Consensus 198 ----------------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~ 245 (272)
T 3h1q_A 198 ----------------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEE 245 (272)
T ss_dssp ----------------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHH
T ss_pred ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHH
Confidence 4678999999999999999999998753 47799999999999999999
Q ss_pred HHHHhCCCCCCCCCCCChhHHHHhhHHHHH
Q 036352 438 MELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 438 l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
+++.|+.++.. +.||++++|.|||++|
T Consensus 246 l~~~l~~~v~~---~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 246 FSRFLGKEVQV---PIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHSSCCBC---CSSGGGHHHHHHHTTC
T ss_pred HHHHhCCCccc---cCChHHHHHHHHHhcC
Confidence 99999999988 8999999999999875
No 12
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.94 E-value=5.1e-27 Score=237.65 Aligned_cols=297 Identities=16% Similarity=0.126 Sum_probs=201.9
Q ss_pred ceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccC---------CcceecHhHhhhhhcCcCchh
Q 036352 87 NVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPN---------GESWVGRQANMMTSLYPSRAL 157 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~---------~~~~~G~~A~~~~~~~~~~~~ 157 (493)
..|+||+||+++++++..++.|.++ +||++....+ ....+|++|.... . .
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~---------------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~ 64 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAV---------------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--I 64 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEE---------------EECCEEEECTTTC-------CCEEHHHHHHHT----T--S
T ss_pred ceEEEECCCCeEEEEECCCCCCcee---------------eccccccccccccccCCCCCCeEechhHhhcC----c--c
Confidence 5899999999999999866666532 4555554322 3568898886541 1 0
Q ss_pred hcchhhhCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCC--CCcEEEEeCCCCC
Q 036352 158 FDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKES--ATKAVISVPACFN 235 (493)
Q Consensus 158 ~~~k~~lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~--~~~vvitVP~~~~ 235 (493)
..+++ |++ +| .+...+.+..+++++.. +.++.. ...+++|+|++++
T Consensus 65 ~~~~~---------------Pi~-----~G---------~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~ 112 (375)
T 2fxu_A 65 LTLKY---------------PIE-----HG---------IITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNP 112 (375)
T ss_dssp EEEEC---------------SEE-----TT---------EECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCC
T ss_pred cceec---------------ccc-----CC---------cccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCc
Confidence 11111 111 23 34445566666666653 223332 3569999999999
Q ss_pred HHHHHHHHHH-HHHcCCCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHH
Q 036352 236 EAQREAIKYA-GDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDF 313 (493)
Q Consensus 236 ~~~r~~l~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~i 313 (493)
..+|+++.++ ++.+|++.+.++.||+||+++++. .+.+|||+| |||+++.+ .++. .+....+..++||+++
T Consensus 113 ~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~----~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~l 185 (375)
T 2fxu_A 113 KANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR----TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDL 185 (375)
T ss_dssp HHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC----SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHH
T ss_pred HHHHHHHHHHHHHhcCcceEEEccchheeeeecCC----CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHH
Confidence 9999988875 688899999999999999999985 378999999 99998765 4553 2222234579999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC----------------CceEEEEecccchhhhcccc
Q 036352 314 DLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSE----------------PQVEVKLHNLLNIQVKKSLV 377 (493)
Q Consensus 314 d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~----------------~~~~~~i~~~~~~~~~~~~~ 377 (493)
|+.|.++|..+- +. ... .. -...+|++|+.++.. ....+.+| +
T Consensus 186 t~~l~~~l~~~~---~~--~~~--~~---~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lp---d-------- 244 (375)
T 2fxu_A 186 TDYLMKILTERG---YS--FVT--TA---EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELP---D-------- 244 (375)
T ss_dssp HHHHHHHHHHHT---CC--CCS--HH---HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT---T--------
T ss_pred HHHHHHHHHhcC---CC--CCc--HH---HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECC---C--------
Confidence 999999998761 22 211 00 124556666665422 22333333 1
Q ss_pred ccceEEEEcHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCEEEEecCCCCcHHHHHHHHHHhC----
Q 036352 378 QKDLEVTITRSEF---ESLVSEL-----IEETGAICQKCLEVANIT--RKDLDGILVVGGLGCVPSVREYMELFFG---- 443 (493)
Q Consensus 378 ~~~~~~~itr~~~---e~~~~~~-----i~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~v~~~l~~~fg---- 443 (493)
...+.+++++| |.+++|. ...+.++|.+.|.+++.+ ...++.|+|+||+|++|++.++|++.++
T Consensus 245 --g~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p 322 (375)
T 2fxu_A 245 --GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAP 322 (375)
T ss_dssp --SCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSC
T ss_pred --CCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCC
Confidence 12578888877 3444553 356788888888876422 2334789999999999999999999885
Q ss_pred ----CCCCCCCCCCChhHHHHhhHHHHHhh
Q 036352 444 ----KSPLKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 444 ----~~~~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
.++.. +.||..++++|++++|..
T Consensus 323 ~~~~v~v~~---~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 323 STMKIKIIA---PPERKYSVWIGGSILASL 349 (375)
T ss_dssp TTCCCCEEC---CTTTTSHHHHHHHHHHHC
T ss_pred CCeeEEEEc---CCCCCccEEcchHHhhCc
Confidence 23334 679999999999999983
No 13
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.94 E-value=1.1e-27 Score=239.48 Aligned_cols=226 Identities=18% Similarity=0.103 Sum_probs=163.9
Q ss_pred eCHHHHHHHHHHHHHHHHHHHhCCCCCcEE--EEeCCCCCHHHHHHHHHHHHHc--------C------CCeeeeccchH
Q 036352 198 FSPAKIQAFILAKMRAIGEVYLKESATKAV--ISVPACFNEAQREAIKYAGDIA--------G------LDIQGVVEDPV 261 (493)
Q Consensus 198 ~~~~~v~~~~L~~l~~~~~~~~~~~~~~vv--itVP~~~~~~~r~~l~~a~~~a--------G------l~~~~li~Ep~ 261 (493)
+.++....+++..|.+.++.....+ .++| +++|+++++.+|+++++++..+ | +..+.+++||.
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3444445555555554432222222 5799 9999999999999999997765 4 35688999999
Q ss_pred HHHHHhcccC----CCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccC--CCC
Q 036352 262 AAALAYGLDK----RDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAF--DAS 334 (493)
Q Consensus 262 Aaa~~~~~~~----~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~--~~~ 334 (493)
|||++|.... +..+++|||+| ||||++++++.++. .+....++.++||+++|+.|.+++.++ ++. .+.
T Consensus 174 AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~----~g~~~~i~ 248 (346)
T 2fsj_A 174 GAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKE----TGFVVPFD 248 (346)
T ss_dssp HHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHH----HCCCCCHH
T ss_pred HHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHH----hCCCcCCC
Confidence 9999883221 14789999999 99999999987776 444445778999999999999888776 554 221
Q ss_pred CCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHHcC
Q 036352 335 HYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEF-ESLVSELIEETGAICQKCLEVAN 413 (493)
Q Consensus 335 ~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~-e~~~~~~i~~i~~~i~~~l~~~~ 413 (493)
.+.+| . ...+.+ .+ . .++++++ +++++++++++.+.+++.|+..
T Consensus 249 ---------~~~~e-------~--~~~~~~----~g--------~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~- 293 (346)
T 2fsj_A 249 ---------LAQEA-------L--SHPVMF----RQ--------K----QVGGPEVSGPILEDLANRIIENIRLNLRGE- 293 (346)
T ss_dssp ---------HHHHH-------T--TSCEEE----TT--------E----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG-
T ss_pred ---------HHHHh-------c--CCeEeE----CC--------c----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 11222 1 111222 22 2 3558999 9999999999999999999875
Q ss_pred CCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhh
Q 036352 414 ITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 414 ~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
...++.|+|+||++++ +++.+++.|+..... ....||++|+|.|+..++..
T Consensus 294 --~~~i~~IvL~GGga~l--l~~~l~~~~~~~~i~-~~~~~P~~ava~G~~~~~~~ 344 (346)
T 2fsj_A 294 --VDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVK-IKPEDLQFANALGYRDAAER 344 (346)
T ss_dssp --GGGEEEEEEESTTHHH--HGGGGGGGSTTCBCC-CCTTTTTTHHHHHHHHHHHT
T ss_pred --hhcccEEEEECCcHHH--HHHHHHHHCcCcEEe-ccCCCcHHHHHHHHHHHHhh
Confidence 3467999999999999 999999999743330 12579999999999988764
No 14
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.94 E-value=3.4e-26 Score=233.69 Aligned_cols=203 Identities=15% Similarity=0.080 Sum_probs=158.5
Q ss_pred HHHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHH
Q 036352 236 EAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDF 313 (493)
Q Consensus 236 ~~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~i 313 (493)
....+.+.+|++.||+++..++.||.|+|++++.... +..++|+|+| ||||+++++ ++.+. +.+..++||++|
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~--~g~~~---~~~~i~~GG~~i 241 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYK--NGVPI---KISYVPVGMKHV 241 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEE--TTEEE---EEEEESCCHHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEE--CCEEE---EEEecccHHHHH
Confidence 3567889999999999999999999999999876543 5679999999 999999987 44432 244579999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC-----CceEEEEecccchhhhccccccceEEEEcHH
Q 036352 314 DLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSE-----PQVEVKLHNLLNIQVKKSLVQKDLEVTITRS 388 (493)
Q Consensus 314 d~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~-----~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~ 388 (493)
|+.|++.+... .+.||++|+.++.. ....+.++... ......++|+
T Consensus 242 t~dIa~~l~~~-------------------~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~----------~~~~~~is~~ 292 (419)
T 4a2a_A 242 IKDVSAVLDTS-------------------FEESERLIITHGNAVYNDLKEEEIQYRGLD----------GNTIKTTTAK 292 (419)
T ss_dssp HHHHHHHHTCC-------------------HHHHHHHHHHHCCSCCTTCCCCEEEEECTT----------SCSEEEEEHH
T ss_pred HHHHHHHHCCC-------------------HHHHHHHHHHhccCcccCCCCceEEEeecC----------CccceEEcHH
Confidence 99999764322 37899999998752 34456666542 2347899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC------CCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCC-----C------
Q 036352 389 EFESLVSELIEETGAICQKCLEVANI------TRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSP-----R------ 451 (493)
Q Consensus 389 ~~e~~~~~~i~~i~~~i~~~l~~~~~------~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~-----~------ 451 (493)
+++++++|.++++.+.+++.|+.++. ....++.|+|+||+|++|+|++.+++.||.++..-. +
T Consensus 293 ~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~ 372 (419)
T 4a2a_A 293 KLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINA 372 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCc
Confidence 99999999999999999999999987 345689999999999999999999999987654310 0
Q ss_pred ---CCChhHHHHhhHHHHHhhhcc
Q 036352 452 ---GVTPDEAVVIGAAIHGEKFRY 472 (493)
Q Consensus 452 ---~~~p~~aVA~GAa~~a~~~~~ 472 (493)
..+|..+.|.|+++++....+
T Consensus 373 ~~~~~~P~~~t~~Gl~~~~~~~~~ 396 (419)
T 4a2a_A 373 DEVANDPSFAAAFGNVFAVSENPY 396 (419)
T ss_dssp HHHHTCGGGHHHHHTTCC------
T ss_pred ccccCCchHHHHHHHHHHHhhccc
Confidence 148999999999999977543
No 15
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.94 E-value=1.5e-26 Score=237.78 Aligned_cols=309 Identities=16% Similarity=0.207 Sum_probs=208.4
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCC-----------------cceecHhHhhh
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNG-----------------ESWVGRQANMM 148 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~-----------------~~~~G~~A~~~ 148 (493)
...|+||+||+++++++..++.|.+ .+||+++...+. ...+|++|...
T Consensus 5 ~~~ivID~Gs~~~k~G~~~~~~p~~---------------~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~ 69 (418)
T 1k8k_A 5 LPACVVDCGTGYTKLGYAGNTEPQF---------------IIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK 69 (418)
T ss_dssp SCCEEEEECSSEEEEEETTCSSCSE---------------EEESCEEECC-----------CCCTTGGGCEEEGGGGTSC
T ss_pred CCeEEEECCCCeEEEeeCCCCCCCC---------------cCCceEEEECcccccccccccccccccccCeEEChHHHhc
Confidence 3589999999999999876655643 257776654321 25677766543
Q ss_pred hhcCcCchhhcchhhhCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCC--CCCcE
Q 036352 149 TSLYPSRALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE--SATKA 226 (493)
Q Consensus 149 ~~~~~~~~~~~~k~~lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~--~~~~v 226 (493)
+. ..+++.+ + +| .+...+.+..+++++.. +.++. ....+
T Consensus 70 ----~~---~~~~~pi---------------~-----~G---------~i~d~d~~e~i~~~~~~---~~L~~~~~~~~v 110 (418)
T 1k8k_A 70 ----PT---YATKWPI---------------R-----HG---------IVEDWDLMERFMEQVIF---KYLRAEPEDHYF 110 (418)
T ss_dssp ----TT---SEEECCE---------------E-----TT---------EESCHHHHHHHHHHHHH---TTTCCCGGGCCE
T ss_pred ----CC---CEEeccc---------------c-----CC---------EECCHHHHHHHHHHHHH---hccCCCCCCCcE
Confidence 10 1111111 1 22 33445555566666553 22332 24589
Q ss_pred EEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeccchHHHHHH-hc---ccCCCCeEEEEEeC-CeeEEEEEEEeCCeEEEE
Q 036352 227 VISVPACFNEAQREAIKYAG-DIAGLDIQGVVEDPVAAALA-YG---LDKRDGLFAVYSFG-GTFEFSILEISNGVIKVK 300 (493)
Q Consensus 227 vitVP~~~~~~~r~~l~~a~-~~aGl~~~~li~Ep~Aaa~~-~~---~~~~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl 300 (493)
++|+|++|+..+|+++.+++ +.+|++.+.++.||+||+++ |. ....+.+.+|||+| ||||++++. ++.. +.
T Consensus 111 vit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~--~G~~-~~ 187 (418)
T 1k8k_A 111 LLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVA--EGYV-IG 187 (418)
T ss_dssp EEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEE--TTEE-CG
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeE--CCEE-cc
Confidence 99999999999999999988 88999999999999999987 42 11123377999999 999999885 4431 22
Q ss_pred EecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCC-----------------ceEEE
Q 036352 301 AKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEP-----------------QVEVK 363 (493)
Q Consensus 301 ~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~-----------------~~~~~ 363 (493)
...+..++||+++|+.|.++|..+. +...... -.+.+|++|+.++... ...+.
T Consensus 188 ~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~ 257 (418)
T 1k8k_A 188 SCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYT 257 (418)
T ss_dssp GGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEE
T ss_pred cceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEE
Confidence 2235579999999999999987652 2111111 1256788888876432 12455
Q ss_pred EecccchhhhccccccceEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHHcCCC--CCCCCEEEEecCCCCcH
Q 036352 364 LHNLLNIQVKKSLVQKDLEVTITRSEF---ESLVSEL------IEETGAICQKCLEVANIT--RKDLDGILVVGGLGCVP 432 (493)
Q Consensus 364 i~~~~~~~~~~~~~~~~~~~~itr~~~---e~~~~~~------i~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p 432 (493)
+|....+ ....+.+++++| |.+++|. +..+.+.|.+.|..++.+ ...++.|+|+||+|++|
T Consensus 258 lpd~~~~--------~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~p 329 (418)
T 1k8k_A 258 GINAISK--------KEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFR 329 (418)
T ss_dssp EECTTTC--------CEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCST
T ss_pred CCCCCCC--------cccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccc
Confidence 5543322 445788999988 5555553 256888999999987543 34458899999999999
Q ss_pred HHHHHHHHHhCCC-------------------C--CCCCCCCChhHHHHhhHHHHHhh
Q 036352 433 SVREYMELFFGKS-------------------P--LKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 433 ~v~~~l~~~fg~~-------------------~--~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
+++++|++.++.. . ..+..+.+|..++.+|++++|..
T Consensus 330 g~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 330 DFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred cHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 9999998766321 0 11112557889999999999985
No 16
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=3.8e-27 Score=239.04 Aligned_cols=318 Identities=16% Similarity=0.169 Sum_probs=201.1
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCchhhcchhhhC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRALFDTKHLVG 165 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg 165 (493)
..++|||+||+++++++..++.+++. ..|.. .+|+... .+| ...+++.+...+|++++
T Consensus 13 ~~~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~-------~~ps~~~--~~g-----------~i~d~~~~~~~ik~~~~ 70 (377)
T 2ych_A 13 VEALGLEIGASALKLVEVSGNPPALK--ALASR-------PTPPGLL--MEG-----------MVAEPAALAQEIKELLL 70 (377)
T ss_dssp CCCEEEEECSSEEEEEEEETTTTEEE--EEEEE-------ECCTTSE--ETT-----------EESCHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCeEEEEEEeCCceEEE--EEEeE-------ECCCCcc--cCC-----------CcCCHHHHHHHHHHHHH
Confidence 46999999999999999877666552 33433 4565432 121 22345566666777765
Q ss_pred CC-CCCchhhcccCCeEEeCCCCceEE-EeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCCC--------
Q 036352 166 TV-YDSSKVQTSLYPKIVRGFKGEAWV-ETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACFN-------- 235 (493)
Q Consensus 166 ~~-~~~~~~~~~~p~~~~~~~~g~~~~-~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~~-------- 235 (493)
+. .....+ .+.-+...+.. .+....++++++-.. +...++.+++.+..++++.+|..=.
T Consensus 71 ~~~~~~~~v-------~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~ 139 (377)
T 2ych_A 71 EARTRKRYV-------VTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGE 139 (377)
T ss_dssp HHTCCCCEE-------EEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTS
T ss_pred HcCCCcceE-------EEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCcc
Confidence 41 000000 00001111111 011135677776432 2346777888888999998873111
Q ss_pred ----------HHHHHHHHHHHHHcCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEEEEeCCeEEEEE
Q 036352 236 ----------EAQREAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSILEISNGVIKVKA 301 (493)
Q Consensus 236 ----------~~~r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~ 301 (493)
....+.++++++.||++...++.||.|++.+|.... ++..++|+|+| ||||+++++. +.. .
T Consensus 140 ~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~--g~~--~- 214 (377)
T 2ych_A 140 QVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG--DKP--L- 214 (377)
T ss_dssp EEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET--TEE--E-
T ss_pred eeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC--CEE--E-
Confidence 122488999999999999999999999999885432 26679999999 9999999974 332 1
Q ss_pred ecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccce
Q 036352 302 KRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDL 381 (493)
Q Consensus 302 ~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~ 381 (493)
..++.++||++||+.|.+. ++.+ +..||++|+.++.............+- ...
T Consensus 215 ~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~~--------~~~ 267 (377)
T 2ych_A 215 AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLDF--------DAE 267 (377)
T ss_dssp EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC--------------------------
T ss_pred EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhccccccccccccccccc--------ccc
Confidence 3455799999999999873 3322 378999999988543221110000000 113
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCC-----C---
Q 036352 382 EVTITRSEFESLVSELIEETGAICQKCLEVA--NITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSP-----R--- 451 (493)
Q Consensus 382 ~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~--~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~-----~--- 451 (493)
...++++++++++++.++++...|++.|+.+ +.....++.|+|+||++++|++++.+++.|+.++.... .
T Consensus 268 ~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~ 347 (377)
T 2ych_A 268 RERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDP 347 (377)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCT
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCc
Confidence 4678999999999999999999999999864 45556799999999999999999999999986543310 0
Q ss_pred ---------CCChhHHHHhhHHHHHh
Q 036352 452 ---------GVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 452 ---------~~~p~~aVA~GAa~~a~ 468 (493)
..+|..++|.|+|+++.
T Consensus 348 ~~~~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 348 KRFESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHhhhHHHHHHHHHHHcCC
Confidence 12466788999999875
No 17
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.87 E-value=2.4e-22 Score=198.94 Aligned_cols=224 Identities=14% Similarity=0.089 Sum_probs=147.7
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCC-CCHH--HH--HHHHHH------------HHHcCCCeeeeccc
Q 036352 197 IFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPAC-FNEA--QR--EAIKYA------------GDIAGLDIQGVVED 259 (493)
Q Consensus 197 ~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~-~~~~--~r--~~l~~a------------~~~aGl~~~~li~E 259 (493)
.+++..+++.+ ..|.. +.. .+.+ ..+++++|.. |... ++ +.+.+- .+..++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45666665543 33432 111 1222 3689999987 6431 11 222221 12334577889999
Q ss_pred hHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCH
Q 036352 260 PVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYP 337 (493)
Q Consensus 260 p~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~ 337 (493)
|.||+++++.... +..++|+|+| ||||+++++ ++...+....++.++||.+||+.|.+++.++ +.++.
T Consensus 149 ~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~~i~--- 218 (320)
T 2zgy_A 149 SIPAGYEVLQELDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RTKGS--- 218 (320)
T ss_dssp SHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SBGGG---
T ss_pred cHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----CCCCC---
Confidence 9999998875433 7789999999 999999997 4444455556778999999999999887532 22222
Q ss_pred HHHHHHHHHHHHH-HHHcCCCCceEEEEecccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Q 036352 338 LVLQRFLGAAERA-KVRLSSEPQVEVKLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITR 416 (493)
Q Consensus 338 ~~~~rL~~~~e~~-K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~ 416 (493)
...+|++ |..- .+. ... ..+...-..+++.+++++.++++.+.|.+.+++.
T Consensus 219 ------~~~ae~~lk~~~---------~~~-~~~--------~~i~~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~---- 270 (320)
T 2zgy_A 219 ------SYLADDIIIHRK---------DNN-YLK--------QRINDENKISIVTEAMNEALRKLEQRVLNTLNEF---- 270 (320)
T ss_dssp ------HHHHHHHHHTTT---------CHH-HHH--------HHSSSSCTHHHHHHHHHHHHHHHHHHHHHHHTTC----
T ss_pred ------HHHHHHHHHHhh---------hhh-ccc--------ceecCchhhHHHHHHHHHHHHHHHHHHHHHHHhh----
Confidence 1345555 4320 000 000 0000011346667777778888777777777652
Q ss_pred CCCCEEEEecCCCCcHHHHHHHHHHhCC---CCCCCCCCCChhHHHHhhHHHHH
Q 036352 417 KDLDGILVVGGLGCVPSVREYMELFFGK---SPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 417 ~~i~~VvLvGG~s~~p~v~~~l~~~fg~---~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
.+++.|+|+||+|++ +++.+++.|+. ++.. ..||++|+|.||+++|
T Consensus 271 ~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~---~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFK---TNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEEC---CSCGGGHHHHHHHHHH
T ss_pred cCCCeEEEECChHHH--HHHHHHHHhCCCCCceee---CCCcHHHHHHHHHHhc
Confidence 468999999999987 99999999987 4666 7999999999999986
No 18
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.83 E-value=1.4e-21 Score=198.93 Aligned_cols=302 Identities=17% Similarity=0.146 Sum_probs=92.6
Q ss_pred ceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccC-----------CcceecHhHhhhhhcCcCc
Q 036352 87 NVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPN-----------GESWVGRQANMMTSLYPSR 155 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~-----------~~~~~G~~A~~~~~~~~~~ 155 (493)
..|+||+||.++++++..++.|.+ .+||+++...+ ....+|++|... +.
T Consensus 7 ~~ivID~Gs~~~k~G~ag~~~P~~---------------~~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~----~~- 66 (394)
T 1k8k_B 7 KVVVCDNGTGFVKCGYAGSNFPEH---------------IFPALVGRPIIRSTTKVGNIEIKDLMVGDEASEL----RS- 66 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEECCCCeEEEeeCCCCCcce---------------eccceeEEEcccccccccCCCCCCeEEChHHHhc----CC-
Confidence 479999999999999986666653 24555554322 234677776532 10
Q ss_pred hhhcchhhhCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHH-HHHHHHhCCCCCcEEEEeCCCC
Q 036352 156 ALFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMR-AIGEVYLKESATKAVISVPACF 234 (493)
Q Consensus 156 ~~~~~k~~lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~-~~~~~~~~~~~~~vvitVP~~~ 234 (493)
...++ .|++ +| .+...+.+..+++++. ..... .......+++|+|+.+
T Consensus 67 -~~~~~---------------~Pi~-----~G---------~i~dwd~~e~i~~~~~~~~~L~-~~~~~~~vllt~p~~~ 115 (394)
T 1k8k_B 67 -MLEVN---------------YPME-----NG---------IVRNWDDMKHLWDYTFGPEKLN-IDTRNCKILLTEPPMN 115 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -Cceee---------------cccc-----CC---------EEecHHHHHHHHHHHhcccccC-cCCCCCcEEEEECCCC
Confidence 00111 1111 22 2333444555555554 21111 0112356999999999
Q ss_pred CHHHHHHHHHH-HHHcCCCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHH
Q 036352 235 NEAQREAIKYA-GDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLD 312 (493)
Q Consensus 235 ~~~~r~~l~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~ 312 (493)
+..+|+.+.++ ++.+|++.+.++.||.||+++++.. +.+|||+| |||+++.+. ++.. +.......++||++
T Consensus 116 ~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~----~~lVVDiG~g~T~v~pv~--~G~~-~~~~~~~~~~GG~~ 188 (394)
T 1k8k_B 116 PTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLL----TGVVVDSGDGVTHICPVY--EGFS-LPHLTRRLDIAGRD 188 (394)
T ss_dssp ------------------------------------------CCEEEECSSCEEEECEE--TTEE-CSTTCEEESCCHHH
T ss_pred CHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCc----eEEEEEcCCCceEeeeeE--CCEE-cccceEEeeccHHH
Confidence 99999988885 5888999999999999999998853 67999999 999997664 4432 11112346899999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCC----------------ceEEEEecccchhhhccc
Q 036352 313 FDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEP----------------QVEVKLHNLLNIQVKKSL 376 (493)
Q Consensus 313 id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~----------------~~~~~i~~~~~~~~~~~~ 376 (493)
+|+.|.++|..+ .+......+ .+.+|++|+.++... ...+.+|
T Consensus 189 lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp----------- 247 (394)
T 1k8k_B 189 ITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP----------- 247 (394)
T ss_dssp HHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT-----------
T ss_pred HHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC-----------
Confidence 999999998765 122221112 245677777665321 1122222
Q ss_pred cccceEEEEcHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCEEEEecCCCCcHHHHHHHHHHhCC--
Q 036352 377 VQKDLEVTITRSEF---ESLVSEL-----IEETGAICQKCLEVANIT--RKDLDGILVVGGLGCVPSVREYMELFFGK-- 444 (493)
Q Consensus 377 ~~~~~~~~itr~~~---e~~~~~~-----i~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~v~~~l~~~fg~-- 444 (493)
....+.++.++| |.+++|. ...+.+.|.+.|.+++.+ ....+.|+|+||+|.+|++.++|++.++.
T Consensus 248 --dg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~ 325 (394)
T 1k8k_B 248 --DGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLY 325 (394)
T ss_dssp --TSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHH
T ss_pred --CCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHH
Confidence 122567787766 2333442 346778888888887543 22347899999999999999999988742
Q ss_pred -----------C---CCCCCCCCChhHHHHhhHHHHHhh
Q 036352 445 -----------S---PLKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 445 -----------~---~~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
+ ...+..+.+|..++.+|++++|..
T Consensus 326 ~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 326 LERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHTCSSCCCTTCCCCC----------------------
T ss_pred hhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 1 111112567889999999999984
No 19
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.73 E-value=1.1e-17 Score=161.99 Aligned_cols=190 Identities=11% Similarity=0.083 Sum_probs=122.4
Q ss_pred cCCCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhh
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTR 327 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~ 327 (493)
++......++|++|.++++....+ ....|+|+| |++++.++. .++.++.....+....|+.++++.+++++...+..
T Consensus 69 a~~~~~~~Vne~~aha~a~~~~~~-~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~ 146 (276)
T 4ehu_A 69 NYSDADKQISELSCHARGVNFIIP-ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSE 146 (276)
T ss_dssp GCCSCSEECCHHHHHHHHHHHHST-TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGG
T ss_pred HhhCCCcccchHHHHHHHHHHhCC-CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhh
Confidence 566677899999999998766553 345789999 999998774 56777777777878889999999999887555432
Q ss_pred hccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccccccce-EEEEcHHHHHHHHHHHHHHHHHHHH
Q 036352 328 CHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSLVQKDL-EVTITRSEFESLVSELIEETGAICQ 406 (493)
Q Consensus 328 ~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~itr~~~e~~~~~~i~~i~~~i~ 406 (493)
...+ .+......+ +...... ... .++ ...-.....++++..+.+.+.+.+.
T Consensus 147 ~~~~---------------------~~~a~~~~~--i~~~~~~----f~~-s~~~~~~~~~~~~~di~a~~~~~v~~~l~ 198 (276)
T 4ehu_A 147 LGSI---------------------SMNSQNEVS--ISSTCTV----FAE-SEVISHLSENAKIEDIVAGIHTSVAKRVS 198 (276)
T ss_dssp HHHH---------------------HTTCSSCCC--CCCCSHH----HHH-HHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHH---------------------HhcCCCCCC--cCCccch----hhh-hHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 1100 000000000 0000000 000 000 0000001123455555555554444
Q ss_pred HHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 407 KCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 407 ~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
....+. ..++.|+|+||.+++|.|++.+++.||.++.. +.||++++|+|||++|........
T Consensus 199 ~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~---p~~p~~~~A~GAAl~A~~~~~~~~ 260 (276)
T 4ehu_A 199 SLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIV---PDIPQLTGALGAALYAFDEAKESQ 260 (276)
T ss_dssp HHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEEC---CSSGGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeee---CCCcchHHHHHHHHHHHHHHhhcc
Confidence 444432 35679999999999999999999999999998 999999999999999987665443
No 20
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.72 E-value=7e-18 Score=168.51 Aligned_cols=207 Identities=19% Similarity=0.240 Sum_probs=138.1
Q ss_pred CcEEEEeCCCCCHHHH-HHHHHHHHHcCC------------CeeeeccchHHHHHHhcccC-------CCCeEEEEEeC-
Q 036352 224 TKAVISVPACFNEAQR-EAIKYAGDIAGL------------DIQGVVEDPVAAALAYGLDK-------RDGLFAVYSFG- 282 (493)
Q Consensus 224 ~~vvitVP~~~~~~~r-~~l~~a~~~aGl------------~~~~li~Ep~Aaa~~~~~~~-------~~~~vlVvDiG- 282 (493)
..+++++|..+...++ +.+++++...+- ..+.+++||.||++++..+. .+..++|+|+|
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3789999999888887 588888775542 56789999999999987643 27789999999
Q ss_pred CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEE
Q 036352 283 GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEV 362 (493)
Q Consensus 283 gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~ 362 (493)
||||++++ .++... ....+....||..+++.+.+++.+++ .+..+. . ...++.+. +
T Consensus 194 gTtd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~---~g~~l~--~-------~~i~~g~~---------~ 249 (355)
T 3js6_A 194 GTTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKS---EGASIT--P-------RMIEKGLE---------Y 249 (355)
T ss_dssp SCEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC----------
T ss_pred CcEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhc---CCCcCC--H-------HHHhcCCc---------c
Confidence 99999988 344421 11233468999999999999988763 122222 1 11111110 0
Q ss_pred EEecccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHH--HHHHHHH
Q 036352 363 KLHNLLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPS--VREYMEL 440 (493)
Q Consensus 363 ~i~~~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~--v~~~l~~ 440 (493)
.. ...+ ..-.+.+ .+.+++.+++.++++.+.|++.+.+ +..++.|+|+||++.++. |.+.+++
T Consensus 250 ~~-~~~~---------~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~ 314 (355)
T 3js6_A 250 KQ-CKLN---------QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSD 314 (355)
T ss_dssp ----------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSS
T ss_pred cc-cccc---------ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHH
Confidence 00 0000 0001122 2356667777777777777777653 356799999999999998 8888888
Q ss_pred HhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCCC
Q 036352 441 FFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRR 476 (493)
Q Consensus 441 ~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~~ 476 (493)
.|+.. .||..|+|.|+.+++..+.+....
T Consensus 315 ~~~~~-------~~p~~anA~G~~~~~~~~~~~~~~ 343 (355)
T 3js6_A 315 VFEKA-------DDSQFSNVRGYEKLGELLKNKVEQ 343 (355)
T ss_dssp CEECC-------SSGGGHHHHHHHHHHHHHHHHHHC
T ss_pred HCCCC-------CCcHHHHHHHHHHHHHHHHhhhhh
Confidence 87332 789999999999999988765433
No 21
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.70 E-value=7e-17 Score=166.62 Aligned_cols=178 Identities=14% Similarity=0.079 Sum_probs=125.4
Q ss_pred ceEEEEcCCccEEEEEEeCCceEEEEccCCCccccCCCcccceEEEEccC---CcceecHhHhhhhhcCcCchhhcchhh
Q 036352 87 NVLGIDLGTTYSRVAVMQGEDPVVIEEVEGGRYTKKSFRSMPSVVFFKPN---GESWVGRQANMMTSLYPSRALFDTKHL 163 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~~~~vi~~~~g~~~~~~~~~~iPS~i~~~~~---~~~~~G~~A~~~~~~~~~~~~~~~k~~ 163 (493)
..|+||+||.++++++..++.|.++ +||+|+...+ ....+|.++... .+.. ..++
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~~v---------------~PSvVg~~~~~~~~~~~vG~e~~~~---~r~~--l~l~-- 81 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQSI---------------LPSVYGKYTADEGNKKIFSEQSIGI---PRKD--YELK-- 81 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCSEE---------------EESEEEEESSCSSCCEECCTTGGGS---CCTT--EEEE--
T ss_pred CeEEEECCCcEEEEEECCCCCeeee---------------cCceeEEeccCCCccEEEecHHHhc---CcCc--eEEe--
Confidence 4799999999999998766655543 7999988643 245788764221 0110 0111
Q ss_pred hCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCC--CCC-cEEEEeCCCCCHHHHH
Q 036352 164 VGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKE--SAT-KAVISVPACFNEAQRE 240 (493)
Q Consensus 164 lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~--~~~-~vvitVP~~~~~~~r~ 240 (493)
.|++ +| .+...+.+..+++|+... .++. ... .+++|.|.......|+
T Consensus 82 -------------~Pi~-----~G---------vI~dwd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 82 -------------PIIE-----NG---------LVIDWDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp -------------ESEE-----TT---------EESCHHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred -------------ccCc-----CC---------EEccHHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHH
Confidence 1111 33 556677777777777643 2332 234 6999999999999999
Q ss_pred HHHHH-HHHcCCCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHH
Q 036352 241 AIKYA-GDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLV 318 (493)
Q Consensus 241 ~l~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~ 318 (493)
.|.++ ++..|++.+.++.+|.+++++.+.. +-+|||+| |+|+++.+. +|.. +........+||+++|+.|.
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~~----tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG~~lt~~L~ 204 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGRP----NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAGKFINHLIK 204 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTCS----SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCCC----eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccHHHHHHHHH
Confidence 99886 5889999999999999999998864 46999999 999998774 4431 11111225899999999999
Q ss_pred HHHHH
Q 036352 319 RHLWR 323 (493)
Q Consensus 319 ~~l~~ 323 (493)
++|..
T Consensus 205 ~lL~~ 209 (498)
T 3qb0_A 205 KALEP 209 (498)
T ss_dssp HHTTT
T ss_pred HHHHh
Confidence 99864
No 22
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.69 E-value=1.5e-17 Score=169.81 Aligned_cols=246 Identities=13% Similarity=0.072 Sum_probs=158.1
Q ss_pred EeCHHHHHHHHHHHHHHHHHHHhCC--CCCcEEEEeCCCCCHHHHHHHHHHH-HHcCCCeeeeccchHHHHHHhcccCC-
Q 036352 197 IFSPAKIQAFILAKMRAIGEVYLKE--SATKAVISVPACFNEAQREAIKYAG-DIAGLDIQGVVEDPVAAALAYGLDKR- 272 (493)
Q Consensus 197 ~~~~~~v~~~~L~~l~~~~~~~~~~--~~~~vvitVP~~~~~~~r~~l~~a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~- 272 (493)
.+...+.+..+++|+... .++. ....+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+...+
T Consensus 98 vI~dwd~~e~iw~~~~~~---~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~ 174 (427)
T 3dwl_A 98 QIENWDHMERFWQQSLFK---YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV 174 (427)
T ss_dssp EECCHHHHHHHHHHHHHT---TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT
T ss_pred eeccHHHHHHHHHHHHhH---hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc
Confidence 556677777777776532 2333 2358999999999999999998875 78999999999999999998875321
Q ss_pred ---CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHH
Q 036352 273 ---DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAE 348 (493)
Q Consensus 273 ---~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e 348 (493)
..+-+|||+| |+|+++.+. ++..- .......++||+++|+.|.++|..+. ..... ++.+|
T Consensus 175 ~~~~~tglVVDiG~g~T~v~PV~--~G~~l-~~~~~rl~~gG~~lt~~L~~lL~~~~----~~~~~---------~~~~~ 238 (427)
T 3dwl_A 175 TDRSLTGTVVDSGDGVTHIIPVA--EGYVI-GSSIKTMPLAGRDVTYFVQSLLRDRN----EPDSS---------LKTAE 238 (427)
T ss_dssp CSCCCCEEEEEESSSCEEEEEEE--TTEEC-GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHH
T ss_pred cCCCceEEEEECCCCceEEEEEE--CCEEe-hhhheeccccHHHHHHHHHHHHHHcC----CCchh---------HHHHH
Confidence 3468999999 999998773 33310 00112258999999999999887652 11111 25677
Q ss_pred HHHHHcCCCCce-----------EEEEe-c-c--cchhhhccccccceEEEEcHHHH---HHHHHHH------HHHHHHH
Q 036352 349 RAKVRLSSEPQV-----------EVKLH-N-L--LNIQVKKSLVQKDLEVTITRSEF---ESLVSEL------IEETGAI 404 (493)
Q Consensus 349 ~~K~~Ls~~~~~-----------~~~i~-~-~--~~~~~~~~~~~~~~~~~itr~~~---e~~~~~~------i~~i~~~ 404 (493)
++|+.++..... ...+. . + .++ ....+.+..++| |-+++|. ...|.++
T Consensus 239 ~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g--------~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~ 310 (427)
T 3dwl_A 239 RIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITG--------HSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPEL 310 (427)
T ss_dssp HHHHHHCCCCSCHHHHHHHTTC-----CCBCC-----------------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHH
T ss_pred HHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCC--------CeeEEEEChHhhhChhhccCchhcCCccCCCccHH
Confidence 888887643210 00000 0 0 011 222456666665 2344441 3468888
Q ss_pred HHHHHHHcCCC--CCCCCEEEEecCCCCcHHHHHHHHHHhC----C--------------C-CCCCCCCCChhHHHHhhH
Q 036352 405 CQKCLEVANIT--RKDLDGILVVGGLGCVPSVREYMELFFG----K--------------S-PLKSPRGVTPDEAVVIGA 463 (493)
Q Consensus 405 i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~v~~~l~~~fg----~--------------~-~~~~~~~~~p~~aVA~GA 463 (493)
+.+.|.+++.+ ..-...|+|+||+|.+|++.++|.+.+. . . ...+..+.++..++=+|+
T Consensus 311 i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGG 390 (427)
T 3dwl_A 311 VDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGG 390 (427)
T ss_dssp HHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHH
T ss_pred HHHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCc
Confidence 88888877543 1123679999999999999999987651 0 0 011112457788999999
Q ss_pred HHHHhh
Q 036352 464 AIHGEK 469 (493)
Q Consensus 464 a~~a~~ 469 (493)
+++|..
T Consensus 391 Silasl 396 (427)
T 3dwl_A 391 SLLAQT 396 (427)
T ss_dssp HHHHHS
T ss_pred eeeccc
Confidence 999974
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.69 E-value=4.6e-18 Score=168.43 Aligned_cols=205 Identities=13% Similarity=0.105 Sum_probs=143.6
Q ss_pred CcEEEEeCCCCCH--HHHHHHHHHHHHc--------C------CCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeE
Q 036352 224 TKAVISVPACFNE--AQREAIKYAGDIA--------G------LDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFE 286 (493)
Q Consensus 224 ~~vvitVP~~~~~--~~r~~l~~a~~~a--------G------l~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtd 286 (493)
..++++.|..+.. .+|+.+++..... | +..+.+++||.+|.+.+....++..++|+|+| ||||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~~~~~~~v~vvDiGggTtd 185 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQENFKNKNVAVIDFGGLNMG 185 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCCCCTTCEEEEEEECSSCEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcchhhccCCEEEEEeCCCcEE
Confidence 4688999988764 3677777776521 1 23567889999998776433337899999999 9999
Q ss_pred EEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEec
Q 036352 287 FSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHN 366 (493)
Q Consensus 287 vsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~ 366 (493)
++++. ++.+ +....+..++||.++++.+.+++.. .+++..+.. ..+|++|+. .. .
T Consensus 186 ~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~-g~---~------ 240 (329)
T 4apw_A 186 FSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN-GY---M------ 240 (329)
T ss_dssp EEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS-CS---S------
T ss_pred EEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc-CC---c------
Confidence 99997 3332 1112345789999999999987765 036655543 234444442 11 0
Q ss_pred ccchhhhccccccceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 367 LLNIQVKKSLVQKDLEVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
..+ .+. ..+..+++++.+++.++++.+.+++. +.+++.++.|+|+||++.+ +.+.+++.|+.++
T Consensus 241 -~~g--------~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~v 304 (329)
T 4apw_A 241 -KKG--------GEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNNS 304 (329)
T ss_dssp -CEE--------CTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTCE
T ss_pred -ccC--------Ccc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCCC
Confidence 011 111 13456777777888887777777766 2345558999999999988 6699999998777
Q ss_pred CCCCCCCChhHHHHhhHHHHHhhhcc
Q 036352 447 LKSPRGVTPDEAVVIGAAIHGEKFRY 472 (493)
Q Consensus 447 ~~~~~~~~p~~aVA~GAa~~a~~~~~ 472 (493)
.. ..||..|+|.|+..++....+
T Consensus 305 ~v---~~~P~~a~a~G~~~~~~~k~~ 327 (329)
T 4apw_A 305 II---TNNSQWTTCEGLYKVAVAKYC 327 (329)
T ss_dssp EC---CSSGGGHHHHHHHHHHHHHHC
T ss_pred Ee---cCCChhhHHHHHHHHHhhhhc
Confidence 77 899999999999999876544
No 24
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.56 E-value=1.3e-13 Score=147.62 Aligned_cols=135 Identities=16% Similarity=0.156 Sum_probs=93.0
Q ss_pred HHHHHHHH-HHhCCCC-----CcEEEEeCCCCCHHHHHHHHHH-HHHcCCCeeeeccchHHHHHHhcccCCCCeEEEEEe
Q 036352 209 AKMRAIGE-VYLKESA-----TKAVISVPACFNEAQREAIKYA-GDIAGLDIQGVVEDPVAAALAYGLDKRDGLFAVYSF 281 (493)
Q Consensus 209 ~~l~~~~~-~~~~~~~-----~~vvitVP~~~~~~~r~~l~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDi 281 (493)
..|++++- ..++... ..+++|+|..++...|+.|-+. ++..|++.+.++.++++++++++.. +-+|||+
T Consensus 178 e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~----tglVVDi 253 (593)
T 4fo0_A 178 EVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS----STCIVDV 253 (593)
T ss_dssp HHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS----EEEEEEE
T ss_pred HHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC----ceEEEEe
Confidence 44555443 4455432 4599999999999999998884 7888999999999999999999854 7899999
Q ss_pred C-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCC-CCCHHHHHHHHHHHHHHHHHcCC
Q 036352 282 G-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDA-SHYPLVLQRFLGAAERAKVRLSS 356 (493)
Q Consensus 282 G-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~-~~~~~~~~rL~~~~e~~K~~Ls~ 356 (493)
| +.|+++-+. +|..-. ......++||.++++.|.+.|..+- +.... ......- +..++.+|+.++.
T Consensus 254 G~~~T~v~PV~--dG~~l~-~~~~rl~~GG~~lt~~L~~lL~~~~---~~~~~~~~~~~~d---~~~v~~iKe~~c~ 321 (593)
T 4fo0_A 254 GDQKTSVCCVE--DGVSHR-NTRLCLAYGGSDVSRCFYWLMQRAG---FPYRECQLTNKMD---CLLLQHLKETFCH 321 (593)
T ss_dssp CSSCEEEEEEE--SSCBCG-GGCEEESCCHHHHHHHHHHHHHHTT---CSCTTCCTTCHHH---HHHHHHHHHHHCB
T ss_pred CCCceeeeeeE--CCEEeh-hheEEecccHHHHHHHHHHHHHhcC---CCccccccccchh---HHHHHHHHHHhcc
Confidence 9 999886553 332111 1122257999999999998887651 21111 1111111 2457788888753
No 25
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.36 E-value=1.7e-13 Score=138.36 Aligned_cols=202 Identities=18% Similarity=0.188 Sum_probs=139.8
Q ss_pred HHHHHHHHHHHHHc-CC--CeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCch
Q 036352 236 EAQREAIKYAGDIA-GL--DIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGG 310 (493)
Q Consensus 236 ~~~r~~l~~a~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG 310 (493)
..+.+++.++++.+ |+ ++-. .||.||+++.+.+.+ +..++++|+| ||||++++.-+... +....+.||
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv-----~a~~ip~gG 439 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDI-----IATHLAGAG 439 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCE-----EEEEEECSH
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE-----EEEEeccch
Confidence 34578899999999 99 6555 999999999999887 8899999999 99999999766555 344478899
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CceEEEE--ecccchhhhccccc
Q 036352 311 LDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSE----------PQVEVKL--HNLLNIQVKKSLVQ 378 (493)
Q Consensus 311 ~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~~~~~~~~~ 378 (493)
++++..|..-|.-. . +..||++|. +... +...+.+ +.+... ....
T Consensus 440 ~~VT~DIA~~Lgt~----------d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~----~~~R 496 (610)
T 2d0o_A 440 DMVTMIIARELGLE----------D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPA----VFAR 496 (610)
T ss_dssp HHHHHHHHHHHTCC----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGG----GTTC
T ss_pred HHHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcc----eeee
Confidence 99999998665433 0 278999999 6421 2223444 322211 1111
Q ss_pred -----cceEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCEEEEecCCCCcHHHHHHHHHHhCC
Q 036352 379 -----KDLEVTITRSE--FESLVSELIEETGAI--CQKCLEVANI-----TRKDLDGILVVGGLGCVPSVREYMELFFGK 444 (493)
Q Consensus 379 -----~~~~~~itr~~--~e~~~~~~i~~i~~~--i~~~l~~~~~-----~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~ 444 (493)
.+.-..| +.+ +|+ ++-+-+++.+. +...|+..+. ...+|..|+|+||+|.++.+.++.++.|+.
T Consensus 497 v~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~~ 574 (610)
T 2d0o_A 497 VCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAH 574 (610)
T ss_dssp EEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTTT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0223355 566 666 55555554443 2333554322 234679999999999999999999999977
Q ss_pred -CCCCC----CCCCChhHHHHhhHHHHHhh
Q 036352 445 -SPLKS----PRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 445 -~~~~~----~~~~~p~~aVA~GAa~~a~~ 469 (493)
++..- ....+|..|+|.|++++-..
T Consensus 575 y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 575 YRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp SSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred CCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 43210 11458999999999987754
No 26
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.34 E-value=2.9e-12 Score=129.98 Aligned_cols=200 Identities=17% Similarity=0.193 Sum_probs=139.3
Q ss_pred HHHHHHHHHHHHc-CC--CeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchH
Q 036352 237 AQREAIKYAGDIA-GL--DIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGL 311 (493)
Q Consensus 237 ~~r~~l~~a~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~ 311 (493)
.+.+++.++++.+ |+ ++-. .||.||+++.+.+.+ +..++++|+| ||||++++.-+... +....+.||+
T Consensus 370 ~~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv-----~a~~ip~gG~ 442 (607)
T 1nbw_A 370 LQMQVIARELSARLQTEVVVGG--VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQI-----TAVHLAGAGN 442 (607)
T ss_dssp CCSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCE-----EEEEEECCHH
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEE-----EEEEeccchH
Confidence 3466788899999 99 5545 999999999999887 8899999999 99999999766665 3444788999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCC----------CceEEEE--ecccchhhhccccc-
Q 036352 312 DFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSE----------PQVEVKL--HNLLNIQVKKSLVQ- 378 (493)
Q Consensus 312 ~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~----------~~~~~~i--~~~~~~~~~~~~~~- 378 (493)
+++..|..-|... . +..||++|. +... +...+.+ +.+... ....
T Consensus 443 ~VT~DIA~~Lg~~----------d--------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~----~~~R~ 499 (607)
T 1nbw_A 443 MVSLLIKTELGLE----------D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPA----VFAKV 499 (607)
T ss_dssp HHHHHHHHHHTCS----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGG----GTTCE
T ss_pred HHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcc----eeeee
Confidence 9999998665433 0 278999999 6421 2223444 322211 1111
Q ss_pred ----cceEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCCEEEEecCCCCcHHHHHHHHHHhCC-
Q 036352 379 ----KDLEVTITRSE--FESLVSELIEETGAI--CQKCLEVANIT-----RKDLDGILVVGGLGCVPSVREYMELFFGK- 444 (493)
Q Consensus 379 ----~~~~~~itr~~--~e~~~~~~i~~i~~~--i~~~l~~~~~~-----~~~i~~VvLvGG~s~~p~v~~~l~~~fg~- 444 (493)
.+.-..| +.+ +|+ ++-+-+++.+. +...|+..+.. ..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 500 ~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~~ 577 (607)
T 1nbw_A 500 VYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHY 577 (607)
T ss_dssp EEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHTT
T ss_pred ecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCcC
Confidence 0223355 556 666 55555555443 44557776553 34569999999999999999999999976
Q ss_pred CCCCC----CCCCChhHHHHhhHHHHHh
Q 036352 445 SPLKS----PRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 445 ~~~~~----~~~~~p~~aVA~GAa~~a~ 468 (493)
++..- ....+|..|+|.|++++-.
T Consensus 578 ~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 578 GVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp TCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred CeEEecCCccccCCchHHHHHHHHHhhh
Confidence 33210 1145899999999998653
No 27
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.80 E-value=1.1e-07 Score=90.91 Aligned_cols=72 Identities=14% Similarity=0.117 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 392 SLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 392 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
+++..+++.+...+.+.++..+ ..+.|+++||.+++|.+++.+.+.++.++.. +.+|+.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~----~~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~---p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVG----IVKDVVMTGGVAQNYGVRGALEEGLGVEIKT---SPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC----CCSSEEEESGGGGCHHHHHHHHHHHCSCEEC---CGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCC----CCCeEEEeCccccCHHHHHHHHHHHCCCeEe---CCCcchHhHHHHHHHHHHh
Confidence 3444455555544545554321 1368999999999999999999999999888 8889889999999999764
No 28
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.20 E-value=6.9e-05 Score=71.58 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=41.4
Q ss_pred CCCEEEEecC-CCCcHHHHHHHHHHh---CCCCCCCCCCCChhHHHHhhHHHHH
Q 036352 418 DLDGILVVGG-LGCVPSVREYMELFF---GKSPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 418 ~i~~VvLvGG-~s~~p~v~~~l~~~f---g~~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
.++.|+++|| .+..|.+++.+.+.+ +.++.. +.+|....|+|||+.+
T Consensus 236 ~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~---p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 236 KTENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYY---VENGAFSGAIGALYLE 286 (287)
T ss_dssp TCCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEE---CTTGGGHHHHHHHHTC
T ss_pred CCCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEE---CCCccHHHHHHHHHhC
Confidence 3558999999 899999999999975 677777 8999999999999975
No 29
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=98.09 E-value=1.3e-05 Score=83.84 Aligned_cols=143 Identities=16% Similarity=0.172 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCC-----CCcEEEEeCCCCCHHHHHHHHHH-HHHcCCCeeeeccchHHHHHHhcccCCCC
Q 036352 201 AKIQAFILAKMRAIGEVYLKES-----ATKAVISVPACFNEAQREAIKYA-GDIAGLDIQGVVEDPVAAALAYGLDKRDG 274 (493)
Q Consensus 201 ~~v~~~~L~~l~~~~~~~~~~~-----~~~vvitVP~~~~~~~r~~l~~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~ 274 (493)
.+.+..+++|+... ..++.. ...+++|.|..++...|+.|.++ ++..|++.+.++.+|.+++++++. ..
T Consensus 196 WD~mE~Iw~y~f~~--~~L~V~p~~~~e~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl---~t 270 (655)
T 4am6_A 196 ISDVTKLLEHALNS--ETLNVKPTKFNQYKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI---ST 270 (655)
T ss_dssp HHHHHHHHHHHHBS--SSCBCCGGGGGGCEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC---SS
T ss_pred HHHHHHHHHHHhcc--ccccccccccCCCcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC---CC
Confidence 44555555554420 134333 25799999999999999999886 567999999999999999998874 13
Q ss_pred eEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccC-CCCCCHHHHHHHHHHHHHHHH
Q 036352 275 LFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAF-DASHYPLVLQRFLGAAERAKV 352 (493)
Q Consensus 275 ~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~~e~~K~ 352 (493)
+.+|||+| |+|+++.+. +|.. +........+||.++|+.|.++|..+- +.. +...+...- +..++.+|+
T Consensus 271 tGLVVDiG~g~T~VvPV~--eG~v-l~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t~~e---~eiVrdIKE 341 (655)
T 4am6_A 271 STCVVNIGAAETRIACVD--EGTV-LEHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDSKHG---WLLAERLKK 341 (655)
T ss_dssp CEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTSHHH---HHHHHHHHH
T ss_pred ceEEEcCCCceEEEEEEe--CCEE-EhhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCCcch---HHHHHHHHH
Confidence 57999999 999998763 4431 111112268999999999999987651 210 011111111 356788898
Q ss_pred HcCCC
Q 036352 353 RLSSE 357 (493)
Q Consensus 353 ~Ls~~ 357 (493)
.++..
T Consensus 342 k~CyV 346 (655)
T 4am6_A 342 NFTTF 346 (655)
T ss_dssp HHCCC
T ss_pred heEEE
Confidence 87754
No 30
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=97.00 E-value=0.16 Score=49.38 Aligned_cols=78 Identities=13% Similarity=0.156 Sum_probs=50.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh---CCCCCCCCCCC---ChhHHH
Q 036352 387 RSEFESLVSE-LIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF---GKSPLKSPRGV---TPDEAV 459 (493)
Q Consensus 387 r~~~e~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f---g~~~~~~~~~~---~p~~aV 459 (493)
++++...++. +.+.+.+.+.++.+.. .++.|+|+||.+....+++.|.+.+ |.++.. +. -.|.++
T Consensus 217 ~~diAa~fq~~l~~~l~~~~~~~~~~~-----~~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~---p~~~~~~D~G~ 288 (330)
T 2ivn_A 217 VEDLAYSFQETAFAALVEVTERAVAHT-----EKDEVVLVGGVAANNRLREMLRIMTEDRGIKFFV---PPYDLCRDNGA 288 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHTCEEEC---CCHHHHSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEe---cCCCCCChhHH
Confidence 3444433333 3344445555555543 3569999999999999999999877 555554 33 234678
Q ss_pred HhhHHHHHhhhcc
Q 036352 460 VIGAAIHGEKFRY 472 (493)
Q Consensus 460 A~GAa~~a~~~~~ 472 (493)
++|+|.+.....|
T Consensus 289 ~iG~a~~~~~~~~ 301 (330)
T 2ivn_A 289 MIAYTGLRMYKAG 301 (330)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9998876654444
No 31
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.97 E-value=0.11 Score=50.53 Aligned_cols=82 Identities=18% Similarity=0.185 Sum_probs=53.8
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh---CCCCCCCCCCCChhHHHHhh
Q 036352 387 RSEFESLVSE-LIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF---GKSPLKSPRGVTPDEAVVIG 462 (493)
Q Consensus 387 r~~~e~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f---g~~~~~~~~~~~p~~aVA~G 462 (493)
++++...++. +.+.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+ |.++.......-.|.++++|
T Consensus 222 ~~diAasfq~~l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG 296 (334)
T 3eno_A 222 IEDISYSIQETAFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIA 296 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHH
Confidence 3444433333 44455566666666654 569999999999999999999887 55554411111356788999
Q ss_pred HHHHHhhhccc
Q 036352 463 AAIHGEKFRYV 473 (493)
Q Consensus 463 Aa~~a~~~~~~ 473 (493)
+|.+.....|.
T Consensus 297 ~a~~~~~~~g~ 307 (334)
T 3eno_A 297 QAALLMYKSGV 307 (334)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 98776655554
No 32
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=96.90 E-value=0.0014 Score=69.04 Aligned_cols=88 Identities=18% Similarity=0.143 Sum_probs=65.8
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhH
Q 036352 384 TITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGA 463 (493)
Q Consensus 384 ~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GA 463 (493)
.-+|.++..+++-+++.+.-.++..++........++.|.++||+++++.+.+.+...||.++.. .+..++.|.||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~----~~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGYNIDTMMASGGGTKNPIFVQEHANATGCAMLL----PEESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEEEEESGGGGCHHHHHHHHHHHCCEEEE----ESCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccccCHHHHHHHHHhhCCeEEe----cCCCcchHHHH
Confidence 34788875545566666655555544433222345889999999999999999999999999887 34567999999
Q ss_pred HHHHhhhcccCC
Q 036352 464 AIHGEKFRYVNR 475 (493)
Q Consensus 464 a~~a~~~~~~~~ 475 (493)
|+.|+.-.|.++
T Consensus 484 A~lA~~a~G~~~ 495 (554)
T 3l0q_A 484 AMMGTVAAGVFE 495 (554)
T ss_dssp HHHHHHHTTSSS
T ss_pred HHHHHHHcCCcC
Confidence 999999887663
No 33
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=96.68 E-value=0.0033 Score=65.47 Aligned_cols=81 Identities=17% Similarity=0.120 Sum_probs=61.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC-CCCCCCCChhHHHHhhHH
Q 036352 386 TRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP-LKSPRGVTPDEAVVIGAA 464 (493)
Q Consensus 386 tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~-~~~~~~~~p~~aVA~GAa 464 (493)
++.++ ++-+++.+.-.++..++.... .. ++.|.++||+++++.+.+.+...+|.++ .. ..+.++.|.|||
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~----~~~~e~~alGaA 445 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK----PDAHLHPLRGLA 445 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC----CCGGGHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe----cCCCCchHHHHH
Confidence 55554 445555555555555554332 34 8899999999999999999999999999 76 568899999999
Q ss_pred HHHhhhcccCC
Q 036352 465 IHGEKFRYVNR 475 (493)
Q Consensus 465 ~~a~~~~~~~~ 475 (493)
+.|+.-.|.++
T Consensus 446 ~lA~~a~G~~~ 456 (511)
T 3hz6_A 446 ALAAVELEWSH 456 (511)
T ss_dssp HHHHHHTTSCS
T ss_pred HHHHHHhCCcC
Confidence 99998877653
No 34
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=96.68 E-value=0.0025 Score=66.23 Aligned_cols=83 Identities=14% Similarity=0.074 Sum_probs=59.8
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHH
Q 036352 386 TRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 386 tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~ 465 (493)
++.++- +-+++.+.-.++..++........++.|.++||+++++.+.+.+...||.++.. .++.++.|.|||+
T Consensus 364 ~~~~l~---RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~----~~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEMA---RAVIEGIIFNLYDAASNLIKNTKKPVAINATGGFLKSDFVRQLCANIFNVPIVT----MKEQQSGTLAAMF 436 (504)
T ss_dssp CHHHHH---HHHHHHHHHHHHHHHHHHHTTSCCCSEEEEESGGGCSHHHHHHHHHHHTSCEEE----ESCSCHHHHHHHH
T ss_pred CHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCchhcCHHHHHHHHHhhCCeEEe----cCCCCchhHHHHH
Confidence 555543 444444444444443332111235889999999999999999999999999987 4566799999999
Q ss_pred HHhhhcccCC
Q 036352 466 HGEKFRYVNR 475 (493)
Q Consensus 466 ~a~~~~~~~~ 475 (493)
.|+.-.|.++
T Consensus 437 lA~~a~G~~~ 446 (504)
T 3ll3_A 437 LARQALGLNQ 446 (504)
T ss_dssp HHHHHTTSCC
T ss_pred HHHHHcCccC
Confidence 9999887664
No 35
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=96.68 E-value=0.0019 Score=67.22 Aligned_cols=56 Identities=23% Similarity=0.281 Sum_probs=49.0
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCCCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNRRE 477 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~~~ 477 (493)
.++.|.++||+++++.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.....
T Consensus 424 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~----~~~~e~~alGAA~lA~~a~G~~~~~ 479 (515)
T 3i8b_A 424 SITRILLIGGGAKSEAIRTLAPSILGMDVTR----PATDEYVAIGAARQAAWVLSGETEP 479 (515)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE----ECCCCHHHHHHHHHHHHHHHCCSSC
T ss_pred CCCEEEEECchhcCHHHHHHHHHHhCCceEe----cCCcccHHHHHHHHHHHHcCCCCCh
Confidence 4789999999999999999999999999876 4566789999999999988876444
No 36
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=96.63 E-value=0.0028 Score=65.70 Aligned_cols=77 Identities=12% Similarity=0.128 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcc
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRY 472 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~ 472 (493)
+++-+++.+.-.++..++...... .++.|.++||+++.+.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|
T Consensus 369 l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~----~~~~e~~alGaA~lA~~~~g 443 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIR----PVVKETTALGAAYLAGLAVD 443 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEE----ESCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEE----cCCCcchHHHHHHHHHHHhC
Confidence 344555555555666665543333 6789999999999999999999999999987 34456999999999998877
Q ss_pred cC
Q 036352 473 VN 474 (493)
Q Consensus 473 ~~ 474 (493)
.+
T Consensus 444 ~~ 445 (497)
T 2zf5_O 444 YW 445 (497)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 37
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=96.61 E-value=0.0031 Score=66.02 Aligned_cols=79 Identities=15% Similarity=0.068 Sum_probs=62.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 391 ESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 391 e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
..+++-+++.+.-.++..++..+.....++.|.++||+++++.+.+.+...||.++.. ..+.++.|.|||+.|+.-
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~----~~~~e~~alGaA~lA~~a 482 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYV----IDTANSACVGSAYRAFHG 482 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEE----CCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEe----cCCCCchHHHHHHHHHHH
Confidence 4445556666665666666665544456789999999999999999999999999987 456789999999999987
Q ss_pred ccc
Q 036352 471 RYV 473 (493)
Q Consensus 471 ~~~ 473 (493)
.|.
T Consensus 483 ~G~ 485 (538)
T 4bc3_A 483 LAG 485 (538)
T ss_dssp HHT
T ss_pred hCc
Confidence 765
No 38
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.52 E-value=0.46 Score=45.83 Aligned_cols=40 Identities=25% Similarity=0.143 Sum_probs=28.2
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~ 290 (493)
.|++ +.+.++..|+|++..+.. ..++++++-+| | +-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEE
Confidence 4887 489999999998754432 25678888889 7 445544
No 39
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=96.52 E-value=0.0029 Score=65.40 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=59.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHH
Q 036352 386 TRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 386 tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~ 465 (493)
++.++ ++-+++.+.-.++..++........++.|.++||+++++.+.+.+...+|.++.. +..++.+.|.|||+
T Consensus 357 ~~~~~---~rAvlEgia~~~~~~~~~l~~~g~~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~---~~~~e~~~alGAA~ 430 (484)
T 2itm_A 357 GPNEL---ARAVLEGVGYALADGMDVVHACGIKPQSVTLIGGGARSEYWRQMLADISGQQLDY---RTGGDVGPALGAAR 430 (484)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCCSCEEEESGGGCCHHHHHHHHHHHCCCEEE---ESCTTSCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEeccccCHHHHHHHHHHhCCeEEe---CCCCCcccHHHHHH
Confidence 45554 4444444444444444333212235788999999999999999999999999987 55555458999999
Q ss_pred HHhhhcccCC
Q 036352 466 HGEKFRYVNR 475 (493)
Q Consensus 466 ~a~~~~~~~~ 475 (493)
.|+.-.|.++
T Consensus 431 lA~~~~g~~~ 440 (484)
T 2itm_A 431 LAQIAANPEK 440 (484)
T ss_dssp HHHHHHCTTS
T ss_pred HHHHHcCCcC
Confidence 9998877653
No 40
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.43 E-value=0.0048 Score=64.42 Aligned_cols=54 Identities=17% Similarity=0.110 Sum_probs=48.4
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++++.+.+.+...||.++.. ....++.|.|||+.|+.-.|.++
T Consensus 402 ~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~----~~~~E~~alGAA~lA~~a~G~~~ 455 (526)
T 3ezw_A 402 RLHALRVDGGAVANNFLMQFQSDILGTRVER----PEVREVTALGAAYLAGLAVGFWQ 455 (526)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE----ESCCCHHHHHHHHHHHHHTTSSS
T ss_pred CCCEEEEECchhhCHHHHHHHHHHHCCEEEe----CCCCchHHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999987 44567899999999999888764
No 41
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=96.43 E-value=0.003 Score=65.54 Aligned_cols=54 Identities=17% Similarity=0.090 Sum_probs=47.9
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++.+.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.++
T Consensus 404 ~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~----~~~~e~~alGaA~la~~a~G~~~ 457 (501)
T 3g25_A 404 DVQSLRVDGGAVKNNFIMQFQADIVNTSVER----PEIQETTALGAAFLAGLAVGFWE 457 (501)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE----ESCCCHHHHHHHHHHHHHTTSSS
T ss_pred CCcEEEEecchhcCHHHHHHHHHHhCCceEe----cCCCcchHHHHHHHHHHHhCccC
Confidence 4789999999999999999999999999876 44667999999999998888764
No 42
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=96.29 E-value=0.0038 Score=64.90 Aligned_cols=54 Identities=15% Similarity=0.071 Sum_probs=47.9
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++++.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.++
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~----~~~~e~~alGaA~lA~~a~G~~~ 456 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQR----AANLETTALGAAYLAGLAVGFWK 456 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE----CSSSCHHHHHHHHHHHHHTTSSC
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEe----cCCCcchhHHHHHHHHHHhCccC
Confidence 4789999999999999999999999999876 45677999999999998887653
No 43
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.27 E-value=0.024 Score=55.55 Aligned_cols=47 Identities=15% Similarity=0.063 Sum_probs=40.3
Q ss_pred CCEEEEecC-CCCcHHHHHHHHHHhC------CCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 419 LDGILVVGG-LGCVPSVREYMELFFG------KSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 419 i~~VvLvGG-~s~~p~v~~~l~~~fg------~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
++.|+++|| .+..|++++.|++.++ .++.. +.+|..+-|+|||+.+.
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~---~~~~~y~GAlGAaL~~~ 359 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALF---LEHEGYFGAVGALLELF 359 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEE---ETTTTCHHHHHHHHHHT
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEE---cCCccHHHHHHHHHHhc
Confidence 447999999 9999999999999863 56666 78999999999999863
No 44
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=96.27 E-value=0.0028 Score=66.14 Aligned_cols=54 Identities=13% Similarity=-0.013 Sum_probs=46.5
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++++.+.+.+...+|.++.. .++.++.|.|||+.|+.-.|.++
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~----~~~~e~~alGAA~lA~~a~G~~~ 478 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDR----PVILETTALGVAWLAGSRAGVWP 478 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEE----ESCCCHHHHHHHHHHHHHHTSSC
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEe----cCCCccHHHHHHHHHHHHcCCcC
Confidence 4789999999999999999999999999986 44567999999999998887653
No 45
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=96.26 E-value=0.0064 Score=63.16 Aligned_cols=54 Identities=9% Similarity=-0.139 Sum_probs=46.9
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++++.+.+.+...+|.++.. +.. .++.|.|||+.|+.-.|.++
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~---~~~-~e~~alGaA~lA~~a~G~~~ 453 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVLQRPVQL---LAN-PLGSAVGAAWVAAIGGGDDL 453 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE---EEC-CSTHHHHHHHHHHHHTCSSC
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHhCCeEEe---cCC-CCchHHHHHHHHHHHhCCCC
Confidence 4789999999999999999999999999987 433 46889999999999888653
No 46
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.25 E-value=0.0063 Score=58.99 Aligned_cols=75 Identities=15% Similarity=0.176 Sum_probs=49.1
Q ss_pred HHHHHHHHHHcCCCeeeeccchHHHHHHhccc--C-CCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHH
Q 036352 239 REAIKYAGDIAGLDIQGVVEDPVAAALAYGLD--K-RDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFD 314 (493)
Q Consensus 239 r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~--~-~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id 314 (493)
.+.+..+-+..|++.-.+-.|.+|...+.+.. . .....+|+|+| |+|.+++.+ ++.+ . ...+.++|+..+.
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~~G~v~l~ 174 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGK--GYKV--R-EVISLPIGIVNLT 174 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEE--TTEE--E-EEEEECCCHHHHH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEe--CCce--e-eEEEEeccHHHHH
Confidence 44555565678999855555666654443322 1 25579999999 999999875 3332 2 2334799999888
Q ss_pred HHHH
Q 036352 315 LLLV 318 (493)
Q Consensus 315 ~~l~ 318 (493)
+.+.
T Consensus 175 e~~~ 178 (315)
T 1t6c_A 175 ETFF 178 (315)
T ss_dssp HHHC
T ss_pred HHhc
Confidence 7753
No 47
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=96.24 E-value=0.0035 Score=65.25 Aligned_cols=54 Identities=17% Similarity=0.110 Sum_probs=47.7
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
.++.|.++||+++++.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.++
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~----~~~~e~~alGaA~lA~~a~G~~~ 454 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVER----PEVREVTALGAAYLAGLAVGFWQ 454 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE----ESCCCHHHHHHHHHHHHHHTSSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEe----cCCCCcHHHHHHHHHHHHhCccC
Confidence 4789999999999999999999999999876 44667999999999998888653
No 48
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=96.23 E-value=0.004 Score=65.79 Aligned_cols=80 Identities=13% Similarity=0.101 Sum_probs=58.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCC-CcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHH
Q 036352 386 TRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG-CVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAA 464 (493)
Q Consensus 386 tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa 464 (493)
++.++ ++-+++.+.-.++..++........++.|.++||++ +++.+.+.+...||.++.. ..+.++.|.|||
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~----~~~~e~~alGaA 482 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRGVEVHELYACGGLPQKNHLLMQIFADVTNREIKV----AASKQTPALGAA 482 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTCCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEE----BCCSSHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEe----cCCCccHHHHHH
Confidence 56554 444444444444443332211233578999999999 9999999999999999976 456789999999
Q ss_pred HHHhhhcc
Q 036352 465 IHGEKFRY 472 (493)
Q Consensus 465 ~~a~~~~~ 472 (493)
+.|+.-.|
T Consensus 483 ~lA~~a~G 490 (572)
T 3jvp_A 483 MFASVAAG 490 (572)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99998887
No 49
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.23 E-value=0.86 Score=43.24 Aligned_cols=49 Identities=18% Similarity=0.276 Sum_probs=35.5
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCC-CCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGK-SPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~-~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
+++.|+|.||.+..+.+.+.+++.+.. ++.. +. ...+.+.||+.++...
T Consensus 239 ~p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~---~~-~~~~~~~GAa~la~~~ 288 (299)
T 2e2o_A 239 GTNKVYLKGGMFRSNIYHKFFTLYLEKEGIIS---DL-GKRSPEIGAVILAYKE 288 (299)
T ss_dssp TCSEEEEESGGGGSHHHHHHHHHHHHHTTCEE---EC-CSCCHHHHHHHHHHHH
T ss_pred CCCEEEEECCccCcHHHHHHHHHHCCCCeEec---cC-CCCChHHHHHHHHHHh
Confidence 456899999988778888888877743 3333 33 4567889999888653
No 50
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.20 E-value=0.21 Score=47.89 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCC-Cc-HHHHHHHHHHhCCCCC-----CCCCCCChhHHHHhhHHH
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG-CV-PSVREYMELFFGKSPL-----KSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~-p~v~~~l~~~fg~~~~-----~~~~~~~p~~aVA~GAa~ 465 (493)
+++...+.+-..+...+... +++.|+|.||.+ .. +.+.+.+++.+..... .+....-...+.++|||.
T Consensus 217 ~~~~~~~~l~~~i~~l~~~~-----~p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~ 291 (302)
T 3vov_A 217 LVLQAARYVGIGLASLVKAF-----DPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAAL 291 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-----CCCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHH
Confidence 33334444444444444432 356899988877 43 6666666655421110 011134456799999998
Q ss_pred HHhh
Q 036352 466 HGEK 469 (493)
Q Consensus 466 ~a~~ 469 (493)
++..
T Consensus 292 l~~~ 295 (302)
T 3vov_A 292 TAYL 295 (302)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 51
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.11 E-value=1.1 Score=43.21 Aligned_cols=48 Identities=23% Similarity=0.151 Sum_probs=32.8
Q ss_pred CCCEEEEecCCCCc-HHHHHHHHHHhC----------CCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 418 DLDGILVVGGLGCV-PSVREYMELFFG----------KSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 418 ~i~~VvLvGG~s~~-p~v~~~l~~~fg----------~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
+++.|+|.||.++. +.+.+.+++.+. ..+.. ....+.+.++|||.++.
T Consensus 260 dP~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~---s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 260 DLNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGK---ATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEE---CSSGGGHHHHHHHHHHH
T ss_pred CCCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEE---cCCCCcHHHHHHHHHHH
Confidence 35789999998876 666666665541 12222 45567899999998874
No 52
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=96.08 E-value=0.0087 Score=61.97 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=58.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHH
Q 036352 386 TRSEFESLVSELIEETGAICQKCLEVAN-ITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAA 464 (493)
Q Consensus 386 tr~~~e~~~~~~i~~i~~~i~~~l~~~~-~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa 464 (493)
++.++ ++-+++.+.-.++..++... .....++.|.++||+++.+.+.+.+...+|.++.. ..+.++.|.|||
T Consensus 368 ~~~~~---~rAvlEgia~~~~~~~~~l~~~~g~~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~----~~~~e~~alGaA 440 (495)
T 2dpn_A 368 SRAHL---ARAALEGVAFQVRDVVLAMEEEAGVRLKVLKADGGMAQNRLFLKIQADLLGVPVAV----PEVTETTALGAA 440 (495)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTTSCCCCCEEEESGGGGCHHHHHHHHHHHTSCEEE----ESCSCHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecccccCHHHHHHHHHHhCCeeEe----cCCcccHHHHHH
Confidence 45544 33444444444444444331 11234678999999999999999999999999876 445568999999
Q ss_pred HHHhhhcccC
Q 036352 465 IHGEKFRYVN 474 (493)
Q Consensus 465 ~~a~~~~~~~ 474 (493)
+.|+.-.|.+
T Consensus 441 ~la~~a~G~~ 450 (495)
T 2dpn_A 441 LMAGVGAGAL 450 (495)
T ss_dssp HHHHHHHTSC
T ss_pred HHHHhhcCcC
Confidence 9998877753
No 53
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=96.00 E-value=0.077 Score=55.78 Aligned_cols=57 Identities=16% Similarity=0.395 Sum_probs=45.7
Q ss_pred EEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHH
Q 036352 382 EVTITRSEFESLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYME 439 (493)
Q Consensus 382 ~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~ 439 (493)
.+.||..+++++. -.-..+..-++..|+.++++..+|+.|+|.||++.-=-+.+.+.
T Consensus 499 ~i~itq~DIr~~q-lAKaAi~agi~~Ll~~~gi~~~di~~v~lAGaFG~~l~~~~a~~ 555 (631)
T 3zyy_X 499 DIVITEADIQNLI-RAKAAIFAGVRTMLAMVDLPLEAIDRVIIAGGFGKYLNIKDAIT 555 (631)
T ss_dssp CEEEEHHHHHHHH-HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESSSCSEEEHHHHHH
T ss_pred cEEEeHHHHHHHH-HHHHHHHHHHHHHHHHcCCCHHHccEEEEeccccccCCHHHHhh
Confidence 5899999999854 44456677788889999999999999999999998655555554
No 54
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=95.97 E-value=0.013 Score=60.83 Aligned_cols=53 Identities=19% Similarity=0.164 Sum_probs=46.8
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccC
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVN 474 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~ 474 (493)
.++.|.++||+++++.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.+
T Consensus 403 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~----~~~~e~~alGaA~lA~~~~G~~ 455 (504)
T 2d4w_A 403 DLTELRVDGGMVANELLMQFQADQLGVDVVR----PKVAETTALGAAYAAGIAVGFW 455 (504)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEE----ESCSCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCCcccCHHHHHHHHHHhCCeEEe----CCCCcchHHHHHHHHHhhcCcc
Confidence 4689999999999999999999999999986 4556799999999999887754
No 55
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.92 E-value=0.41 Score=46.06 Aligned_cols=72 Identities=24% Similarity=0.236 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCC-cHHHHHHHHHHhCCCC-------CCCCCCCChhHHHHhhHHH
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGC-VPSVREYMELFFGKSP-------LKSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~-~p~v~~~l~~~fg~~~-------~~~~~~~~p~~aVA~GAa~ 465 (493)
++.....+...+...+... +++.|+|.||.+. .+.+.+.+++.+.... ..+........+.++|||.
T Consensus 243 ~~~~~~~L~~~i~~l~~~l-----~p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~ 317 (326)
T 2qm1_A 243 VDRVCFYLGLATGNLGNTL-----NPDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAAS 317 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHH-----CCSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc-----CCCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHH
Confidence 3334444444444444443 3468999999886 5777777776652110 1101133466789999999
Q ss_pred HHhhh
Q 036352 466 HGEKF 470 (493)
Q Consensus 466 ~a~~~ 470 (493)
++...
T Consensus 318 l~~~~ 322 (326)
T 2qm1_A 318 LALQF 322 (326)
T ss_dssp HGGGG
T ss_pred HHHHh
Confidence 87654
No 56
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=95.88 E-value=0.0069 Score=62.88 Aligned_cols=53 Identities=11% Similarity=0.055 Sum_probs=46.2
Q ss_pred CC-CEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhcccC
Q 036352 418 DL-DGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVN 474 (493)
Q Consensus 418 ~i-~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~ 474 (493)
.+ +.|.++||+++.+.+.+.+...+|.++.. ..+.++.|.|||+.|+.-.|.+
T Consensus 406 ~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~----~~~~e~~alGaA~la~~~~G~~ 459 (503)
T 2w40_A 406 EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEV----SKYKEVTSLGAAVLAGLEVKIW 459 (503)
T ss_dssp SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEE----ESCSCHHHHHHHHHHHHHTTCS
T ss_pred CccceEEEeCccccCHHHHHHHHHHHCCeEEe----cCCCcchHHHHHHHHHHHhCcc
Confidence 36 78999999999999999999999999876 4455689999999999887754
No 57
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=95.82 E-value=0.31 Score=45.25 Aligned_cols=21 Identities=24% Similarity=0.298 Sum_probs=18.2
Q ss_pred ceEEEEcCCccEEEEEEeCCc
Q 036352 87 NVLGIDLGTTYSRVAVMQGED 107 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~~ 107 (493)
+.++||+|+|+++.+++++++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 589999999999999987553
No 58
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=95.75 E-value=0.055 Score=52.32 Aligned_cols=74 Identities=19% Similarity=0.212 Sum_probs=46.0
Q ss_pred HHHHHHHHHHcCCCeeeeccchHHHHHHhcccC--C--CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHH
Q 036352 239 REAIKYAGDIAGLDIQGVVEDPVAAALAYGLDK--R--DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDF 313 (493)
Q Consensus 239 r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~--~--~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~i 313 (493)
.+.+.++-+..|++.-.+-.|-+|...+.+... . ....+|+|+| |+|.+++++- +.+ . ...+.++|...+
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~--~~~--~-~~~Sl~lG~vrl 166 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNK--NEI--L-WKQSFEIGGQRL 166 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECS--SCE--E-EEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEEC--CeE--e-eeEEEechhhHH
Confidence 444556666679998444445555433332221 1 4679999999 9999998863 221 1 233478998877
Q ss_pred HHHH
Q 036352 314 DLLL 317 (493)
Q Consensus 314 d~~l 317 (493)
.+.+
T Consensus 167 ~e~f 170 (315)
T 3mdq_A 167 IDRF 170 (315)
T ss_dssp HHHS
T ss_pred HHHh
Confidence 7654
No 59
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=95.72 E-value=0.11 Score=48.93 Aligned_cols=20 Identities=30% Similarity=0.464 Sum_probs=18.5
Q ss_pred ceEEEEcCCccEEEEEEeCC
Q 036352 87 NVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~ 106 (493)
++++||+|+|+++.++++++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp CEEEEEECSSEEEEEEEETT
T ss_pred eEEEEEECCCeEEEEEEECC
Confidence 58999999999999999876
No 60
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.46 E-value=2 Score=41.55 Aligned_cols=60 Identities=10% Similarity=-0.099 Sum_probs=41.4
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHHH-cC--CCeeeeccchHHHHHHhcccCCCCeEEEEEeC-Cee
Q 036352 222 SATKAVISVPACFNEAQREAIKYAGDI-AG--LDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTF 285 (493)
Q Consensus 222 ~~~~vvitVP~~~~~~~r~~l~~a~~~-aG--l~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTt 285 (493)
++..+.|++|...+......+++..+. .+ .-.+.+.++..|+++++ + ....+++=+| |.-
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~---~~~~v~v~~GTGig 133 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T---PDGGVVLISGTGSN 133 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C---SSCEEEEEESSSEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C---CCCcEEEEEcCCce
Confidence 467899999999887766666666554 34 13458899999999984 3 2345566667 653
No 61
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=95.43 E-value=0.89 Score=47.27 Aligned_cols=188 Identities=14% Similarity=0.092 Sum_probs=94.7
Q ss_pred CCCcEEEEe-CCCCCHHHHHHH--HHHHHHcCCCeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEEEEeCCe
Q 036352 222 SATKAVISV-PACFNEAQREAI--KYAGDIAGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSILEISNGV 296 (493)
Q Consensus 222 ~~~~vvitV-P~~~~~~~r~~l--~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~~~~~~~ 296 (493)
+++.+++|. |..++....-.. +..+...|++.+. ++.-.|=+++...... ... +++-+. |+|.+. .+..+.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~-v~h~~aH~~~~~~~~~~~~p-~~l~vsGg~t~~~--~~~~~~ 147 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIG-VNHCIAHIEIGKLTTEAEDP-LTLYVSGGNTQVI--AYVSKK 147 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEE-EEHHHHHHHHHHHHSSCSSC-EEEEECSSCEEEE--EEETTE
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeE-eccHHHHHHHHHHhcCCCCC-cEEEEcCCCcEEE--EEeCCc
Confidence 567787876 877665432221 2234455777644 4444443333322222 122 444455 666553 444688
Q ss_pred EEEEEecCCCCCchHHHHHHHHHHHHHHHhhhccCCCCCCHHHHHHHHHHHHHHHHHcCCCCceEEEEecccchhhhccc
Q 036352 297 IKVKAKRKSLSHGGLDFDLLLVRHLWREFTRCHAFDASHYPLVLQRFLGAAERAKVRLSSEPQVEVKLHNLLNIQVKKSL 376 (493)
Q Consensus 297 ~~vl~~~~~~~~GG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~~e~~K~~Ls~~~~~~~~i~~~~~~~~~~~~ 376 (493)
+++++...+ .--|+.||..=. . .++.....+ .+.+| +... .. .+.+|....+
T Consensus 148 ~~~lg~t~d-~s~G~~~D~~a~-~--------lgl~~~gg~-~ie~l---A~~g------~~--~~~~p~~~~~------ 199 (540)
T 3en9_A 148 YRVFGETLD-IAVGNCLDQFAR-Y--------VNLPHPGGP-YIEEL---ARKG------KK--LVDLPYTVKG------ 199 (540)
T ss_dssp EEEEEEBSS-SCHHHHHHHHHH-H--------TTCCSSCHH-HHHHH---HHTC------CC--CCCCCCCEET------
T ss_pred eEEEeeccc-hHhHHHHHHHHH-H--------cCCCCCCHH-HHHHH---HHcC------Cc--cCcCCCCCCC------
Confidence 899887663 455777775321 1 233322211 22222 2111 01 1112211111
Q ss_pred cccceEE-------------EEcHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh
Q 036352 377 VQKDLEV-------------TITRSEFESLVSE-LIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF 442 (493)
Q Consensus 377 ~~~~~~~-------------~itr~~~e~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f 442 (493)
.++++ ..+.+++...++. +++-+.+.+.++++..+ ++.|+|+||.+....+++.+.+..
T Consensus 200 --~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 200 --MDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp --TEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred --cceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 11100 0123344433443 44445566666666654 569999999999999999999876
Q ss_pred ---CCCCCC
Q 036352 443 ---GKSPLK 448 (493)
Q Consensus 443 ---g~~~~~ 448 (493)
|.++..
T Consensus 273 ~~~~~~~~~ 281 (540)
T 3en9_A 273 EGQNVDFYV 281 (540)
T ss_dssp HHTTCEEEC
T ss_pred HhcCCEEEe
Confidence 444444
No 62
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=95.26 E-value=2.3 Score=40.98 Aligned_cols=51 Identities=27% Similarity=0.166 Sum_probs=33.7
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCC------CCCCCCChhHHHHhhHHHHHh
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPL------KSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~------~~~~~~~p~~aVA~GAa~~a~ 468 (493)
+++.|+|-||.+..+.+.+.+++.+..... .+....-.+.+.++|||.++-
T Consensus 269 ~p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~l 325 (327)
T 4db3_A 269 DPHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLNI 325 (327)
T ss_dssp CCSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTTC
T ss_pred CCCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHHh
Confidence 356899999988887777777776632111 101133456899999998763
No 63
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=94.73 E-value=0.032 Score=57.53 Aligned_cols=47 Identities=19% Similarity=0.128 Sum_probs=39.9
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhh
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
.++.|.++||+++++.+.+.+...+|.++.. +. .++.|.|||+.|..
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~---~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADACGIRVIA---GP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEE---CC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHHCCeeec---CC--ccHhHHHHHHHHHH
Confidence 4789999999999999999999999999876 43 58899999555544
No 64
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=94.49 E-value=0.16 Score=49.62 Aligned_cols=77 Identities=21% Similarity=0.233 Sum_probs=45.9
Q ss_pred HHHHHHHHHHcCCCeeeeccchHHHHHHh-cc----cC--CCCeEEEEEeC-CeeEEEEEEE--eCCeEEEEEecCCCCC
Q 036352 239 REAIKYAGDIAGLDIQGVVEDPVAAALAY-GL----DK--RDGLFAVYSFG-GTFEFSILEI--SNGVIKVKAKRKSLSH 308 (493)
Q Consensus 239 r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~-~~----~~--~~~~vlVvDiG-gTtdvsv~~~--~~~~~~vl~~~~~~~~ 308 (493)
.+.+.++-+..|++. .+|+-.+=|.+.| +. .. ....++|+|+| |+|+++++.- ....-++. ...+.++
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~-~~~Slpl 182 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ-GAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS-EEEEESC
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc-eeEEEeh
Confidence 445555666679987 5555443333333 22 11 13569999999 9999998754 22100001 1334689
Q ss_pred chHHHHHHH
Q 036352 309 GGLDFDLLL 317 (493)
Q Consensus 309 GG~~id~~l 317 (493)
|+..+++.+
T Consensus 183 G~v~lt~~~ 191 (343)
T 3cer_A 183 GSVRMTERH 191 (343)
T ss_dssp CHHHHHHHT
T ss_pred hHHHHHHHh
Confidence 999988875
No 65
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.06 E-value=0.95 Score=43.58 Aligned_cols=40 Identities=20% Similarity=0.162 Sum_probs=27.5
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~ 290 (493)
.+++ +.+.++..|+|++..+.. ....++++-+| | +-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 589999999998754332 25678888889 7 334443
No 66
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=93.90 E-value=2.6 Score=41.89 Aligned_cols=40 Identities=13% Similarity=0.010 Sum_probs=27.4
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~ 290 (493)
.|++ +.+.++..|+|++..+.. ....++++-+| | +-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 488999999998754332 25578888888 7 334444
No 67
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=93.58 E-value=0.053 Score=56.18 Aligned_cols=73 Identities=25% Similarity=0.292 Sum_probs=45.0
Q ss_pred HHHHHHHHHHcCCCeeeeccchHHHHHHh-ccc--CC-CCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHH
Q 036352 239 REAIKYAGDIAGLDIQGVVEDPVAAALAY-GLD--KR-DGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDF 313 (493)
Q Consensus 239 r~~l~~a~~~aGl~~~~li~Ep~Aaa~~~-~~~--~~-~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~i 313 (493)
.+.+.++-+..|++. .+|+-.+=|.+.| +.. .. .+..+|+|+| |+|.+++.+ ++.. . ...+.++|...+
T Consensus 99 ~~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~~~--~~~~--~-~~~Sl~lG~vrl 172 (513)
T 1u6z_A 99 TDFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGE--NFEP--I-LVESRRMGCVSF 172 (513)
T ss_dssp HHHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEEEE--TTEE--E-EEEEESCCHHHH
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEEEe--CCee--e-EEEEEeccHHHH
Confidence 344555555679888 5555443333333 222 11 2369999999 999998864 3332 1 223478999988
Q ss_pred HHHH
Q 036352 314 DLLL 317 (493)
Q Consensus 314 d~~l 317 (493)
++.+
T Consensus 173 te~f 176 (513)
T 1u6z_A 173 AQLY 176 (513)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8776
No 68
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=92.51 E-value=0.55 Score=44.04 Aligned_cols=20 Identities=20% Similarity=0.476 Sum_probs=17.8
Q ss_pred eEEEEcCCccEEEEEEeCCc
Q 036352 88 VLGIDLGTTYSRVAVMQGED 107 (493)
Q Consensus 88 ivGIDlGTt~s~va~~~~~~ 107 (493)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68899999999999998763
No 69
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=92.18 E-value=0.083 Score=54.30 Aligned_cols=72 Identities=11% Similarity=0.061 Sum_probs=54.2
Q ss_pred HHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHH-hCCCCCCCCCCCChhHHHHhhHHHHH
Q 036352 391 ESLVSELIEE--TGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELF-FGKSPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 391 e~~~~~~i~~--i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~-fg~~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
..+.+-.++. +.-.++..++... ..+.|.++||+++++.+.+.+... ||.++.. + +..++.|.|||+.|
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~----~~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~---~-~~~e~~alGAA~lA 433 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIG----STGRILVEGRFAEADVFVRALASLRPDCAVYT---A-NAHNDVSFGALRLI 433 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTT----CCSEEEEESGGGGCHHHHHHHHHHSTTSEEEE---E-SSCCCTTGGGHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhc----CCCeEEEeCCcccCHHHHHHHhhhcCCCeEEE---c-CCCchHHHHHHHHh
Confidence 3455555553 4445555665542 237999999999999999999999 9999987 3 44568899999999
Q ss_pred hhh
Q 036352 468 EKF 470 (493)
Q Consensus 468 ~~~ 470 (493)
+.-
T Consensus 434 ~~a 436 (482)
T 3h6e_A 434 DPG 436 (482)
T ss_dssp CTT
T ss_pred Ccc
Confidence 875
No 70
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=92.07 E-value=0.78 Score=44.10 Aligned_cols=39 Identities=8% Similarity=0.008 Sum_probs=26.5
Q ss_pred CeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEE
Q 036352 252 DIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILE 291 (493)
Q Consensus 252 ~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~ 291 (493)
+......-|.|.+....... ....+++|+| +|||+..+.
T Consensus 106 p~~~aaanw~ASa~~~A~~~-~~~~llvDIGsTTTDIipi~ 145 (334)
T 3cet_A 106 NMKVSASNWCGTAKWVSKNI-EENCILVDMGSTTTDIIPIV 145 (334)
T ss_dssp GGGTBCCSSHHHHHHHHHHT-CSSEEEEEECSSCEEEEEEE
T ss_pred HHHHHhcCHHHHHHHHHHhc-CCCEEEEEcCcchhhhhhhc
Confidence 44455667777777433332 1358999999 999998776
No 71
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=88.91 E-value=1.3 Score=47.85 Aligned_cols=80 Identities=10% Similarity=0.089 Sum_probs=52.8
Q ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh---CCCCCCCCCCC---ChhHHHH
Q 036352 388 SEFESLVSELI-EETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF---GKSPLKSPRGV---TPDEAVV 460 (493)
Q Consensus 388 ~~~e~~~~~~i-~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f---g~~~~~~~~~~---~p~~aVA 460 (493)
.++...++..+ +-+.+.+.++.++. .++.|+|+||.+....+.+.+.+.+ |.++.. +. --|..+|
T Consensus 679 ~dIAasfQ~al~~~L~~~~~~a~~~t-----g~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~---p~~vP~nDgGiA 750 (772)
T 4g9i_A 679 ADIAYSAHLALARAFAHTAVERAREF-----GVKNVALSGGVAYNELITKMIRKVVEANGLNFHV---TTEVPRGDNGVN 750 (772)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT-----TCSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCC---CTTSCSSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-----CcCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEc---cCCCCCCcchHH
Confidence 34444444433 33344555555543 4679999999999999999999887 455544 32 2378899
Q ss_pred hhHHHHHhhhcccCC
Q 036352 461 IGAAIHGEKFRYVNR 475 (493)
Q Consensus 461 ~GAa~~a~~~~~~~~ 475 (493)
.|.|++|+.....+.
T Consensus 751 LGQA~iA~~~L~~~l 765 (772)
T 4g9i_A 751 VGQAFLGGLYLEGYL 765 (772)
T ss_dssp HHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHhccC
Confidence 999988876544443
No 72
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=88.57 E-value=2.3 Score=43.73 Aligned_cols=72 Identities=24% Similarity=0.269 Sum_probs=44.6
Q ss_pred HHHHHHHHHHcCCCeeeecc-chHHHHHHhcccC--CCCeEEEEEeC-CeeEEEEEEEeCCeEEEEEecCCCCCchHHHH
Q 036352 239 REAIKYAGDIAGLDIQGVVE-DPVAAALAYGLDK--RDGLFAVYSFG-GTFEFSILEISNGVIKVKAKRKSLSHGGLDFD 314 (493)
Q Consensus 239 r~~l~~a~~~aGl~~~~li~-Ep~Aaa~~~~~~~--~~~~vlVvDiG-gTtdvsv~~~~~~~~~vl~~~~~~~~GG~~id 314 (493)
.+.+.++-+..|++. .+|+ |-+|...+.+... .....+|+|+| |+|.+++.+ ++.+ . ...+.++|...+.
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~--~~~~--~-~~~Sl~lG~vrl~ 176 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIK--DKSC--G-EGITLPLGGLRLS 176 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEE--TTEE--C-CCEEESCCHHHHH
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEee--CCee--e-eEEEecceEEehh
Confidence 445566666779988 5554 4444433333221 23345999999 999998876 3321 1 2334789998888
Q ss_pred HH
Q 036352 315 LL 316 (493)
Q Consensus 315 ~~ 316 (493)
+.
T Consensus 177 e~ 178 (508)
T 3hi0_A 177 EQ 178 (508)
T ss_dssp HH
T ss_pred hc
Confidence 64
No 73
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=88.34 E-value=1.2 Score=45.48 Aligned_cols=55 Identities=9% Similarity=-0.041 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHcCCCe--eeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEE
Q 036352 236 EAQREAIKYAGDIAGLDI--QGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILE 291 (493)
Q Consensus 236 ~~~r~~l~~a~~~aGl~~--~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~ 291 (493)
..-.+.|+++.++.|+++ +.++++.+|++++..+.. ..+++-+=+| |+=-..+.+
T Consensus 185 ~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~-~~~~iglIlGTG~N~~y~e~ 242 (485)
T 3o8m_A 185 HDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD-PQTKMGIIIGTGVNGAYYDV 242 (485)
T ss_dssp SBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC-TTEEEEEEESSSEEEEEEEE
T ss_pred ccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC-CCcEEEEEEecCcceEEEee
Confidence 455778899998888863 678999999999877654 4556666678 654443333
No 74
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=87.44 E-value=1.5 Score=47.26 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh---CCCCCCCCCCCChhHHHHhhHHHHHhhhcccCC
Q 036352 399 EETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF---GKSPLKSPRGVTPDEAVVIGAAIHGEKFRYVNR 475 (493)
Q Consensus 399 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f---g~~~~~~~~~~~p~~aVA~GAa~~a~~~~~~~~ 475 (493)
+.+.+.+.++.+.. .++.|+|+||.+....|++.|.+.+ |.++.......-.|.++|+|.|++|....+..+
T Consensus 679 ~~L~~~~~~a~~~~-----g~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~~~~ 753 (761)
T 3vth_A 679 NFTYDLANLIRKET-----GINKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILEGSA 753 (761)
T ss_dssp HHHHHHHHHHHHHH-----CCCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHHHh-----CCCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhccCC
Confidence 33444445555543 3569999999999999999999887 544433101122478899999999987655444
Q ss_pred C
Q 036352 476 R 476 (493)
Q Consensus 476 ~ 476 (493)
.
T Consensus 754 ~ 754 (761)
T 3vth_A 754 W 754 (761)
T ss_dssp C
T ss_pred C
Confidence 3
No 75
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=86.51 E-value=0.95 Score=44.25 Aligned_cols=71 Identities=15% Similarity=0.118 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCC-CCCCC-CCCCChhHHHHhhHHHHHhhh
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGK-SPLKS-PRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~-~~~~~-~~~~~p~~aVA~GAa~~a~~~ 470 (493)
-+.+=+...|.+.++... ..+.|+++||+++.|.|.++|++.++. ++... .-..+|+.-=|..-|++|.+.
T Consensus 271 TLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~~ 343 (370)
T 3cqy_A 271 TLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMRY 343 (370)
T ss_dssp HHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHHH
Confidence 333334445555555442 356999999999999999999999842 32110 002334433344446666553
No 76
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=86.44 E-value=1.7 Score=46.03 Aligned_cols=78 Identities=10% Similarity=0.129 Sum_probs=51.3
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHh-CCCCCCCCCCCChhHHHHhhHH
Q 036352 387 RSEFESLVSE-LIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFF-GKSPLKSPRGVTPDEAVVIGAA 464 (493)
Q Consensus 387 r~~~e~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f-g~~~~~~~~~~~p~~aVA~GAa 464 (493)
++++...+.. +++.+.+.+.++.+.. .++.|+|+||.+....|++.+.+.+ |.++.......--|.++|.|.|
T Consensus 572 ~~dIAasFh~ala~~L~~~~~ra~~~~-----g~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA 646 (657)
T 3ttc_A 572 VNQRAWAFHDALAQGFAALMREQATMR-----GITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQG 646 (657)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----TCCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHH
Confidence 3343333333 3344444555555543 4679999999999999999999988 5544331113345789999999
Q ss_pred HHHhh
Q 036352 465 IHGEK 469 (493)
Q Consensus 465 ~~a~~ 469 (493)
++|+.
T Consensus 647 ~~a~~ 651 (657)
T 3ttc_A 647 VIAAA 651 (657)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 77
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=85.50 E-value=5.2 Score=38.40 Aligned_cols=44 Identities=23% Similarity=0.264 Sum_probs=30.1
Q ss_pred HHcCCCeeeeccchHHHHHHhccc-------------CCCCeEEEEEeC-CeeEEEEEE
Q 036352 247 DIAGLDIQGVVEDPVAAALAYGLD-------------KRDGLFAVYSFG-GTFEFSILE 291 (493)
Q Consensus 247 ~~aGl~~~~li~Ep~Aaa~~~~~~-------------~~~~~vlVvDiG-gTtdvsv~~ 291 (493)
+..|++.+.+.++..|+|++-... +..+.++++-+| |- -..++-
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGi-G~giv~ 156 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGL-GVAHLV 156 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSE-EEEEEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccc-eEEEEe
Confidence 345888679999999999986542 124568888888 73 344443
No 78
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=84.72 E-value=2.6 Score=42.61 Aligned_cols=53 Identities=15% Similarity=-0.007 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHcCCC--eeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEE
Q 036352 237 AQREAIKYAGDIAGLD--IQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 237 ~~r~~l~~a~~~aGl~--~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~ 290 (493)
.-++.|+++.++.|++ ++.++++..|++++-.+.. ..+++.+=+| |+=-.-+.
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~-~~~~iglilGTGvgg~~i~ 219 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD-AXIKMGIIFGSGVNAAYWC 219 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC-TTEEEEEEESSSEEEEEEE
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC-CccEEEEEECcEEEEEEEE
Confidence 4567788888766775 4789999999999877633 5566777788 74333333
No 79
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=82.07 E-value=4.7 Score=38.24 Aligned_cols=34 Identities=26% Similarity=0.170 Sum_probs=24.8
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-C
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-G 283 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-g 283 (493)
.|+++ .+.++..|+|++-.+.. ..++++++-+| |
T Consensus 97 ~~~pV-~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG 134 (302)
T 3epq_A 97 MXIPV-GFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG 134 (302)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS
T ss_pred hCCCE-EEechhHHHHHHHHHhCCCCCCCcEEEEEECCc
Confidence 48874 89999999999765432 25567888888 5
No 80
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=81.40 E-value=8.4 Score=38.82 Aligned_cols=55 Identities=22% Similarity=0.270 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHcCCCe--eeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEE
Q 036352 235 NEAQREAIKYAGDIAGLDI--QGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILE 291 (493)
Q Consensus 235 ~~~~r~~l~~a~~~aGl~~--~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~ 291 (493)
...-.+.|+++..+.|+++ +.++++..|++++..+.. ..+++-+=+| |+ ..+++.
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~-~~~~iglIlGTG~-na~yve 228 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED-PKCAVGLIVGTGT-NVAYIE 228 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC-TTEEEEEEESSSE-EEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC-CCcEEEEEEeCCc-ceEEEE
Confidence 4456788889988878763 488999999999876664 4566666688 64 444443
No 81
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=80.62 E-value=5.4 Score=41.40 Aligned_cols=82 Identities=13% Similarity=0.072 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCC-CCCCCCCCCChhHHHHhhHH
Q 036352 387 RSEFESLVSELI-EETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGK-SPLKSPRGVTPDEAVVIGAA 464 (493)
Q Consensus 387 r~~~e~~~~~~i-~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~-~~~~~~~~~~p~~aVA~GAa 464 (493)
..++...++..+ +-+.+.+..+.+.. .++.|+|.||.+....+.+.+.+..+. .+.. ++.--|.++++|+|
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~t-----g~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~v--pp~~~D~G~aiGqA 352 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLART-----GERTLFVAGGVGLNATMNGKLLTRSTVDKMFV--PPVASDIGVSLGAA 352 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHH-----TCSEEEEESGGGGCHHHHHHHHTSTTCSEEEC--CTTCSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEecchHHHHHHHHHHHHHhcCCCeEEe--CCCCCchHHHHHHH
Confidence 455655565533 33445556666654 366999999999999999999876554 2222 23456788999999
Q ss_pred HHHhhhcccCC
Q 036352 465 IHGEKFRYVNR 475 (493)
Q Consensus 465 ~~a~~~~~~~~ 475 (493)
+++....|..+
T Consensus 353 ~~a~~~~g~~~ 363 (576)
T 3ven_A 353 AAVAVELGDRI 363 (576)
T ss_dssp HHHHHHTTCCC
T ss_pred HHHHHHcCCCC
Confidence 99988766544
No 82
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=80.41 E-value=12 Score=35.11 Aligned_cols=53 Identities=19% Similarity=0.209 Sum_probs=36.5
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCC---CCCCCCChhHHHHhhHHHHHhhh
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPL---KSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~---~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
+++.|+|.||.+..+.+.+.+++.+..... .+........+.++||+.++...
T Consensus 237 ~p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~~ 292 (297)
T 4htl_A 237 DPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQE 292 (297)
T ss_dssp CCSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHHH
Confidence 356899999998888788888877742211 11113355679999999888754
No 83
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=78.60 E-value=4.4 Score=44.90 Aligned_cols=50 Identities=16% Similarity=0.168 Sum_probs=35.8
Q ss_pred CHHHHHHHHHHHHHc-CC--CeeeeccchHHHHHHhcccCCCCeEEEEEeC-Cee
Q 036352 235 NEAQREAIKYAGDIA-GL--DIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTF 285 (493)
Q Consensus 235 ~~~~r~~l~~a~~~a-Gl--~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTt 285 (493)
...-.+.|++++.+- ++ +++.++++..|++++..+.. ..+.+-+=+| |+=
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~-~~~~iglIlGTG~n 683 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE-PTCEVGLIVGTGSN 683 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC-TTEEEEEEESSSEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC-CCcEEEEEEeCCee
Confidence 445577788887654 45 58899999999988876664 4456666678 653
No 84
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=78.17 E-value=1.7 Score=44.97 Aligned_cols=26 Identities=46% Similarity=0.682 Sum_probs=20.8
Q ss_pred cCCCCCCceEEEEcCCccEEEEEEeC
Q 036352 80 FSSKSQGNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 80 ~~~~~~~~ivGIDlGTt~s~va~~~~ 105 (493)
|++|.+.+++|||+|||++++++++.
T Consensus 20 ~~~MM~~~~lgIDiGtts~k~~l~d~ 45 (520)
T 4e1j_A 20 FQSMMGGYILAIDQGTTSTRAIVFDG 45 (520)
T ss_dssp CCCCCSCEEEEEEECSSEEEEEEECT
T ss_pred HHHHhhCeEEEEEeCCcceEEEEECC
Confidence 34444568999999999999999854
No 85
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=77.29 E-value=26 Score=34.09 Aligned_cols=73 Identities=8% Similarity=0.121 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCc-HHHHHHHHHHhCCC-----CCCCCCCCChhHHHHhhHHH
Q 036352 392 SLVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCV-PSVREYMELFFGKS-----PLKSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 392 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~-p~v~~~l~~~fg~~-----~~~~~~~~~p~~aVA~GAa~ 465 (493)
++++...+.+-..+...+... +++.|+|.||.+.. +.+.+.+++.+... ...+........+.+.|||.
T Consensus 293 ~~l~~~~~~La~~i~~l~~~l-----dP~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~ 367 (380)
T 2hoe_A 293 EYFDDIARYFSIGLLNLIHLF-----GISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAV 367 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-----CCCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-----CCCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHH
Confidence 344444444444444444443 35689999998764 67777776655210 01100122345688999998
Q ss_pred HHhh
Q 036352 466 HGEK 469 (493)
Q Consensus 466 ~a~~ 469 (493)
++..
T Consensus 368 l~~~ 371 (380)
T 2hoe_A 368 HALE 371 (380)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7753
No 86
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=77.04 E-value=1.8 Score=33.66 Aligned_cols=20 Identities=25% Similarity=0.265 Sum_probs=17.3
Q ss_pred ceEEEEcCCccEEEEEEeCC
Q 036352 87 NVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~ 106 (493)
.++|||+|+..+.+|+.+..
T Consensus 2 riLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 2 RVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CEEEEEESSSEEEEEEECSC
T ss_pred cEEEEEeCCCEEEEEEEeCC
Confidence 38999999999999987654
No 87
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=76.42 E-value=6.5 Score=39.41 Aligned_cols=50 Identities=18% Similarity=0.191 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHcC---CCeeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEE
Q 036352 237 AQREAIKYAGDIAG---LDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEF 287 (493)
Q Consensus 237 ~~r~~l~~a~~~aG---l~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdv 287 (493)
.-.+.|+++++..| ++++.++++.+|+.++..+.. ..+.+-+=+| ||=-.
T Consensus 161 dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~-~~~~iglIlGTGtNa~ 214 (445)
T 3hm8_A 161 DVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED-PRCEIGLIVGTGTNAC 214 (445)
T ss_dssp BHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC-TTEEEEEEESSSEEEE
T ss_pred cHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC-CCceEEEEEeCCceEE
Confidence 44778888887764 567889999999999876654 4455555678 75333
No 88
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=75.81 E-value=10 Score=37.74 Aligned_cols=40 Identities=30% Similarity=0.198 Sum_probs=27.5
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~ 290 (493)
.|+++ .+.++..|+|++..+.. ....++++-+| | +-.+++
T Consensus 208 ~~~pV-~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLPV-FVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCCE-EEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 47774 89999999998754332 25677888888 7 334444
No 89
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=74.09 E-value=5.4 Score=38.93 Aligned_cols=68 Identities=16% Similarity=0.205 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhC-CCCCCC-CCCCChhHHHHhhHHHHHhhhc
Q 036352 401 TGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFG-KSPLKS-PRGVTPDEAVVIGAAIHGEKFR 471 (493)
Q Consensus 401 i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg-~~~~~~-~~~~~p~~aVA~GAa~~a~~~~ 471 (493)
+...|.+.++... ..++.|+++||+++.|.|.++|++.++ ..+... .-..+|+.-=|..-|++|....
T Consensus 269 TA~sIa~~~~~~~---~~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~~l 338 (371)
T 3qbx_A 269 SARSISESLLDAQ---PDCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHRFL 338 (371)
T ss_dssp HHHHHHHHHHHHC---TTCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc---CCCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHHHH
Confidence 3344445554432 246799999999999999999999984 332210 0023445444555666666543
No 90
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=73.57 E-value=18 Score=34.58 Aligned_cols=40 Identities=28% Similarity=0.065 Sum_probs=27.2
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-gTtdvsv~ 290 (493)
.|++ +.+.++..|+|++..+.. ....++++-+| | +-.+++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 3776 488999999998754332 24577888888 7 334444
No 91
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=72.87 E-value=2.7 Score=34.94 Aligned_cols=22 Identities=36% Similarity=0.442 Sum_probs=18.8
Q ss_pred CceEEEEcCCccEEEEEEeCCc
Q 036352 86 GNVLGIDLGTTYSRVAVMQGED 107 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~ 107 (493)
+.++|||+|+..++||+.+...
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTT
T ss_pred CeEEEEEeCCCEEEEEEEcCCC
Confidence 3599999999999999987653
No 92
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=71.75 E-value=2.6 Score=43.28 Aligned_cols=22 Identities=23% Similarity=0.406 Sum_probs=18.7
Q ss_pred CCceEEEEcCCccEEEEEEeCC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~ 106 (493)
+.+++|||+|||++++++++..
T Consensus 3 m~~~lgIDiGtts~K~~l~d~~ 24 (504)
T 3ll3_A 3 LKYIIGMDVGTTATKGVLYDIN 24 (504)
T ss_dssp CEEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEecCCceEEEEEcCC
Confidence 3479999999999999998643
No 93
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=71.08 E-value=2.9 Score=43.30 Aligned_cols=24 Identities=25% Similarity=0.381 Sum_probs=19.1
Q ss_pred CCCCceEEEEcCCccEEEEEEeCC
Q 036352 83 KSQGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 83 ~~~~~ivGIDlGTt~s~va~~~~~ 106 (493)
+++.+++|||+||+.+++++++..
T Consensus 7 ~~~~~~lgID~GTts~Ka~l~d~~ 30 (538)
T 4bc3_A 7 APRRCCLGWDFSTQQVKVVAVDAE 30 (538)
T ss_dssp --CCEEEEEEECSSEEEEEEEETT
T ss_pred CCCCEEEEEEEcCcCEEEEEECCC
Confidence 345689999999999999998643
No 94
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=70.82 E-value=31 Score=32.14 Aligned_cols=69 Identities=7% Similarity=-0.115 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCc--HHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhhc
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCV--PSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKFR 471 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~--p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~~ 471 (493)
...++++..+.+-..+ .... ..++..|+|.||.+.. +.+++.+++.. . . ...|..+...||+.+|....
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~---~---i~~~~~a~~~GA~~la~~~~ 282 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG-L---T---LGSVLQSPMEGLIQYHHNNH 282 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT-C---C---EEEEESCSHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC-C---e---ecccCcCHHHHHHHHHHhhh
Confidence 3445555555555555 2221 1256789999998776 55666655432 1 2 23355778899999987543
No 95
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=70.12 E-value=20 Score=39.64 Aligned_cols=54 Identities=26% Similarity=0.298 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHcC-CC--eeeeccchHHHHHHhcccCCCCeEEEEEeC-CeeEEEEEE
Q 036352 236 EAQREAIKYAGDIAG-LD--IQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTFEFSILE 291 (493)
Q Consensus 236 ~~~r~~l~~a~~~aG-l~--~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTtdvsv~~ 291 (493)
..-++.|+++....| ++ ++.++++..|++++-.+. ...+++.+=+| |+ ..+++.
T Consensus 183 ~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~-~~~~~iglilGTGv-ngg~i~ 240 (917)
T 1cza_N 183 ADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYD-DQHCEVGLIIGTGT-NACYME 240 (917)
T ss_dssp SBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHH-CTTEEEEEEESSSE-EEEEEE
T ss_pred CchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhcc-CCCcEEEEEEECCc-ceEEEe
Confidence 345677788877666 54 689999999999987665 34566777788 64 444443
No 96
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=69.59 E-value=3.3 Score=42.59 Aligned_cols=22 Identities=27% Similarity=0.454 Sum_probs=18.6
Q ss_pred CCceEEEEcCCccEEEEEEeCC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~ 106 (493)
+.+++|||+|||++++++++..
T Consensus 6 ~~~~lgIDiGtts~k~~l~d~~ 27 (508)
T 3ifr_A 6 GRQVIGLDIGTTSTIAILVRLP 27 (508)
T ss_dssp -CEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEecCcceEEEEECCC
Confidence 4579999999999999999644
No 97
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=67.52 E-value=2.8 Score=42.76 Aligned_cols=20 Identities=30% Similarity=0.526 Sum_probs=17.6
Q ss_pred CCceEEEEcCCccEEEEEEe
Q 036352 85 QGNVLGIDLGTTYSRVAVMQ 104 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~ 104 (493)
+..++|||+|||++++++++
T Consensus 3 ~~~~lgiDiGtts~k~~l~d 22 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLAR 22 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEE
Confidence 45699999999999999984
No 98
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=67.43 E-value=3.9 Score=42.54 Aligned_cols=22 Identities=27% Similarity=0.510 Sum_probs=18.7
Q ss_pred CCceEEEEcCCccEEEEEEeCC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~ 106 (493)
+.+++|||+|||++++++++..
T Consensus 4 ~~~~lgIDiGtts~ka~l~d~~ 25 (554)
T 3l0q_A 4 ASYFIGVDVGTGSARAGVFDLQ 25 (554)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CcEEEEEEECcccEEEEEECCC
Confidence 3579999999999999998643
No 99
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=66.83 E-value=3.7 Score=42.35 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.2
Q ss_pred CCceEEEEcCCccEEEEEEeC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~ 105 (493)
..+++|||+||+++++++++.
T Consensus 3 kkYvlgID~GTss~Ka~l~d~ 23 (526)
T 3ezw_A 3 KKYIVALDQGTTSSRAVVMDH 23 (526)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred ceEEEEEEccccceeeeEEcC
Confidence 357999999999999999853
No 100
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=65.90 E-value=4.7 Score=41.50 Aligned_cols=20 Identities=30% Similarity=0.385 Sum_probs=18.1
Q ss_pred CCceEEEEcCCccEEEEEEe
Q 036352 85 QGNVLGIDLGTTYSRVAVMQ 104 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~ 104 (493)
+.+++|||+|||++++++++
T Consensus 4 ~~~~lgIDiGtts~ka~l~d 23 (515)
T 3i8b_A 4 RTLVAGVDTSTQSCKVRVTD 23 (515)
T ss_dssp SCEEEEEEECSSEEEEEEEE
T ss_pred CcEEEEEEeccccEEEEEEE
Confidence 35799999999999999997
No 101
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=64.86 E-value=4.5 Score=41.54 Aligned_cols=21 Identities=38% Similarity=0.545 Sum_probs=18.2
Q ss_pred CCceEEEEcCCccEEEEEEeC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~ 105 (493)
+.+++|||+|||++++++++.
T Consensus 2 ~~~~lgIDiGtts~k~~l~d~ 22 (510)
T 2p3r_A 2 KKYIVALDQGTTSSRAVVMDH 22 (510)
T ss_dssp CCEEEEEEECSSEEEEEEECT
T ss_pred CcEEEEEEcCCcceEEEEECC
Confidence 357999999999999999854
No 102
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=64.70 E-value=3.8 Score=41.82 Aligned_cols=21 Identities=38% Similarity=0.547 Sum_probs=16.6
Q ss_pred CCceEEEEcCCccEEEEEEeC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~ 105 (493)
+.+++|||+|||++++++++.
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~ 25 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDL 25 (482)
T ss_dssp ---CEEEEECSSEEEEEEECT
T ss_pred hceEEEEEcCCCCeEEEEEEC
Confidence 357999999999999999853
No 103
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=63.51 E-value=4.8 Score=41.40 Aligned_cols=21 Identities=24% Similarity=0.311 Sum_probs=18.2
Q ss_pred CceEEEEcCCccEEEEEEeCC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~ 106 (493)
.+++|||+|||++++++++..
T Consensus 5 ~~~lgIDiGtts~k~~l~d~~ 25 (511)
T 3hz6_A 5 FYIATFDIGTTEVKAALADRD 25 (511)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEEeCCCceEEEEECCC
Confidence 479999999999999998543
No 104
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=63.50 E-value=4.6 Score=42.16 Aligned_cols=20 Identities=25% Similarity=0.466 Sum_probs=18.0
Q ss_pred CceEEEEcCCccEEEEEEeC
Q 036352 86 GNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~ 105 (493)
.+++|||+|||++++++++.
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred CEEEEEecCCcceEEEEEEC
Confidence 47999999999999999964
No 105
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=63.35 E-value=5.2 Score=41.01 Aligned_cols=22 Identities=36% Similarity=0.542 Sum_probs=18.7
Q ss_pred CCceEEEEcCCccEEEEEEeCC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~ 106 (493)
+.+++|||+|||++++++++..
T Consensus 4 ~~~~lgIDiGtts~k~~l~d~~ 25 (506)
T 3h3n_X 4 KNYVMAIDQGTTSSRAIIFDRN 25 (506)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCEEEEEEcCCCceEEEEECCC
Confidence 3579999999999999998643
No 106
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=61.96 E-value=5 Score=41.01 Aligned_cols=21 Identities=38% Similarity=0.447 Sum_probs=17.5
Q ss_pred CceEEEEcCCccEEEEEEeCC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~ 106 (493)
.+++|||+|||++++++++..
T Consensus 2 ~~~lgiDiGtT~~k~~l~d~~ 22 (495)
T 2dpn_A 2 AFLLALDQGTTSSRAILFTLE 22 (495)
T ss_dssp -CEEEEEECSSEEEEEEECTT
T ss_pred cEEEEEeeCCcceEEEEECCC
Confidence 358999999999999998543
No 107
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=61.80 E-value=5.2 Score=40.99 Aligned_cols=21 Identities=29% Similarity=0.362 Sum_probs=18.0
Q ss_pred CceEEEEcCCccEEEEEEeCC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~ 106 (493)
..++|||+|||++++++++..
T Consensus 4 ~~~lgIDiGtT~~k~~l~d~~ 24 (503)
T 2w40_A 4 NVILSIDQSTQSTKVFFYDEE 24 (503)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred cEEEEEEeCCcceEEEEECCC
Confidence 368999999999999998643
No 108
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=61.46 E-value=5.3 Score=33.66 Aligned_cols=20 Identities=40% Similarity=0.567 Sum_probs=17.3
Q ss_pred ceEEEEcCCccEEEEEEeCC
Q 036352 87 NVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~~~ 106 (493)
.++|||+|+..+++|+.+..
T Consensus 4 riLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEECSSEEEEEEECTT
T ss_pred EEEEEEccCCEEEEEEEECC
Confidence 49999999999999988643
No 109
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=61.33 E-value=9 Score=32.55 Aligned_cols=18 Identities=33% Similarity=0.582 Sum_probs=16.2
Q ss_pred ceEEEEcCCccEEEEEEe
Q 036352 87 NVLGIDLGTTYSRVAVMQ 104 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~ 104 (493)
.++|||.|++++..++.+
T Consensus 2 ~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 2 IILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccCCCCeeEEEEE
Confidence 489999999999999884
No 110
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=60.66 E-value=16 Score=34.79 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=59.8
Q ss_pred hhhhhhhhhhh---cccccccccccccccccccHHHHHhhccccCCCCCchhhhHHHHHhhhhhccccCCCCCCceEEEE
Q 036352 16 KTLEKYEQLCE---LSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGID 92 (493)
Q Consensus 16 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivGID 92 (493)
.+|.++.++|+ ..+-.++ -|||--.-.++.+|++.|++..--.-....--.+..++++.....+. ......+-||
T Consensus 60 ~~L~~f~~~~~~~~v~~v~~v-ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~-~~~~~~lviD 137 (315)
T 3mdq_A 60 DTLKKFRVILDEHAVVHVIAT-GTSAVRSGSNKQVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVP-MEDHISLAMD 137 (315)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE-ECHHHHHCTTHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSC-CTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEE-eeHHHHcCcCHHHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCC-CCCCCEEEEE
Confidence 46778888884 5566666 56666677899999999998541111333333444455444433332 2235689999
Q ss_pred cCCccEEEEEEeCCce
Q 036352 93 LGTTYSRVAVMQGEDP 108 (493)
Q Consensus 93 lGTt~s~va~~~~~~~ 108 (493)
+|..+|-+++.+++.+
T Consensus 138 IGGGStEl~~~~~~~~ 153 (315)
T 3mdq_A 138 IGGGSVEFIIGNKNEI 153 (315)
T ss_dssp ECSSCEEEEEECSSCE
T ss_pred eCCCceEEEEEECCeE
Confidence 9999999999887765
No 111
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=59.67 E-value=6.1 Score=40.37 Aligned_cols=20 Identities=35% Similarity=0.463 Sum_probs=17.7
Q ss_pred CceEEEEcCCccEEEEEEeC
Q 036352 86 GNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~ 105 (493)
.+++|||+|||++++++++.
T Consensus 3 ~~~lgiDiGtt~~k~~l~d~ 22 (497)
T 2zf5_O 3 KFVLSLDEGTTSARAIIFDR 22 (497)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEecCCchhEEEEECC
Confidence 46999999999999999854
No 112
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=59.01 E-value=6.4 Score=40.29 Aligned_cols=20 Identities=40% Similarity=0.519 Sum_probs=17.8
Q ss_pred CceEEEEcCCccEEEEEEeC
Q 036352 86 GNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~ 105 (493)
.+++|||+|||++++++++.
T Consensus 6 ~~~lgIDiGtts~k~~l~d~ 25 (501)
T 3g25_A 6 KYILSIDQGTTSSRAILFNQ 25 (501)
T ss_dssp CEEEEEEECSSEEEEEEECT
T ss_pred cEEEEEEeCccceEEEEEcC
Confidence 47999999999999999854
No 113
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=58.19 E-value=14 Score=35.28 Aligned_cols=90 Identities=18% Similarity=0.278 Sum_probs=56.6
Q ss_pred hhhhhhhhhhh---cccccccccccccccccccHHHHHhhccccCCCCCchhhhHHHHHhhhhhccccCCCCCCceEEEE
Q 036352 16 KTLEKYEQLCE---LSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGID 92 (493)
Q Consensus 16 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivGID 92 (493)
.+|.++.++|+ ..+-.++ -|+|--.-.++.+|++.|++..-=.-.....-.+..+.++.....+. .....+-||
T Consensus 68 ~~L~~f~~~~~~~~v~~i~~v-ATsA~R~A~N~~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~--~~~~~lvvD 144 (315)
T 1t6c_A 68 QVLKEYKKLIDEFKVERVKAV-ATEAIRRAKNAEEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLK--PEGEVCVVD 144 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-ECHHHHTSTTHHHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTC--CCSEEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEE-EcHHHHcCcCHHHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcc--cCCCEEEEE
Confidence 36777777775 3344555 45555566799999999998541111223333333344434333322 245689999
Q ss_pred cCCccEEEEEEeCCce
Q 036352 93 LGTTYSRVAVMQGEDP 108 (493)
Q Consensus 93 lGTt~s~va~~~~~~~ 108 (493)
+|...|-+++.+++.+
T Consensus 145 IGGGStEl~~~~~~~~ 160 (315)
T 1t6c_A 145 QGGGSTEYVFGKGYKV 160 (315)
T ss_dssp EETTEEEEEEEETTEE
T ss_pred eCCCcEEEEEEeCCce
Confidence 9999999999887765
No 114
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=58.09 E-value=27 Score=32.43 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhC-----C----CCCCCCCCCChhHHHHhhH
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFG-----K----SPLKSPRGVTPDEAVVIGA 463 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg-----~----~~~~~~~~~~p~~aVA~GA 463 (493)
+++...+.+...+...+... +++.|+|.||.+..+.+.+.+++.+. . ....+........+.++||
T Consensus 207 i~~~~~~~L~~~i~~l~~~l-----~p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GA 281 (292)
T 2gup_A 207 AIERMNRNLAQGLLNIQYLI-----DPGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGA 281 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh-----CCCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHH
Confidence 34444444444444444443 35689999998777777666665541 1 1111111234557899999
Q ss_pred HHHHhh
Q 036352 464 AIHGEK 469 (493)
Q Consensus 464 a~~a~~ 469 (493)
+.++..
T Consensus 282 a~~~~~ 287 (292)
T 2gup_A 282 LVNWLQ 287 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 115
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=56.60 E-value=21 Score=34.43 Aligned_cols=89 Identities=13% Similarity=0.181 Sum_probs=55.9
Q ss_pred hhhhhhhhhhhc---ccccccccccccccccccHHHHHhhccccCCCCCchhhhHHHHHhhhhhccccCC-CCCCceEEE
Q 036352 16 KTLEKYEQLCEL---SRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSS-KSQGNVLGI 91 (493)
Q Consensus 16 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ivGI 91 (493)
.+|.++.++|+- .+-.++ -|||--.-.++.+|++.|++..-=.-....--.+..++++.....+.. ......+-|
T Consensus 73 ~aL~~f~~~~~~~~v~~v~~v-ATsA~R~A~N~~~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lvi 151 (343)
T 3cer_A 73 VAAREFAGVIAEHPIDGLRFV-ATSATRDAENREEFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVV 151 (343)
T ss_dssp HHHHHHHHHHTTSCCSEEEEE-ECHHHHHCTTHHHHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEE-ecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEE
Confidence 467788888853 344555 466666668999999999995411223333334444554443332221 123568999
Q ss_pred EcCCccEEEEEEeC
Q 036352 92 DLGTTYSRVAVMQG 105 (493)
Q Consensus 92 DlGTt~s~va~~~~ 105 (493)
|+|...|-+++..+
T Consensus 152 DIGGGStel~~~~~ 165 (343)
T 3cer_A 152 DLGGGSTELVIGGD 165 (343)
T ss_dssp EECSSCEEEEECCC
T ss_pred EeCCCceEEEEeec
Confidence 99999999998765
No 116
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=55.56 E-value=24 Score=33.05 Aligned_cols=34 Identities=26% Similarity=0.304 Sum_probs=24.8
Q ss_pred cCCCeeeeccchHHHHHHhcccC---CCCeEEEEEeC-C
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---RDGLFAVYSFG-G 283 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~~~~vlVvDiG-g 283 (493)
.|+++ .+.++..|+|++..+.. ..+.++++-+| |
T Consensus 97 ~~~pV-~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG 134 (297)
T 4htl_A 97 TGLPV-AIENDANCALLAEKWLGKGQDLDDFLCLTIGTG 134 (297)
T ss_dssp HCSCE-EEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS
T ss_pred HCcCE-EEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc
Confidence 47874 89999999998754432 25567888888 6
No 117
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=54.71 E-value=8.3 Score=39.45 Aligned_cols=21 Identities=48% Similarity=0.545 Sum_probs=17.9
Q ss_pred CceEEEEcCCccEEEEEEeCC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~ 106 (493)
.+++|||+|||++++++++..
T Consensus 2 ~~~lgiDiGtts~k~~l~d~~ 22 (504)
T 2d4w_A 2 DYVLAIDQGTTSSRAIVFDHS 22 (504)
T ss_dssp CEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEecCCcceEEEEECCC
Confidence 368999999999999998543
No 118
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=53.82 E-value=8.3 Score=39.19 Aligned_cols=18 Identities=39% Similarity=0.674 Sum_probs=16.3
Q ss_pred eEEEEcCCccEEEEEEeC
Q 036352 88 VLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 88 ivGIDlGTt~s~va~~~~ 105 (493)
++|||+|||++++++++.
T Consensus 2 ~lgiDiGtt~~k~~l~d~ 19 (484)
T 2itm_A 2 YIGIDLGTSGVKVILLNE 19 (484)
T ss_dssp EEEEEECSSEEEEEEECT
T ss_pred EEEEEecCcccEEEEECC
Confidence 799999999999999853
No 119
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=53.19 E-value=13 Score=31.71 Aligned_cols=18 Identities=39% Similarity=0.433 Sum_probs=16.3
Q ss_pred ceEEEEcCCccEEEEEEe
Q 036352 87 NVLGIDLGTTYSRVAVMQ 104 (493)
Q Consensus 87 ~ivGIDlGTt~s~va~~~ 104 (493)
.|+|||.|++++..++.+
T Consensus 2 rILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp EEEEEECCSSEEEEEEEE
T ss_pred EEEEEccccCceEEEEEE
Confidence 489999999999999874
No 120
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=48.79 E-value=17 Score=33.74 Aligned_cols=71 Identities=15% Similarity=0.248 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCC----CCCCCCChhHHHHhhHHHHHh
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPL----KSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~----~~~~~~~p~~aVA~GAa~~a~ 468 (493)
+++...+.+...+...+... +++.|+|.||.+..+.+.+.+++.+..... .+......+.+.++|||.++.
T Consensus 213 i~~~~~~~L~~~i~~l~~~l-----~p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 213 LIHRSARTLARLIADIKATT-----DCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----CCSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 34444444444444444443 345899989877667788888877643210 000133455689999998764
No 121
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=47.37 E-value=8.7 Score=39.49 Aligned_cols=28 Identities=4% Similarity=-0.088 Sum_probs=21.8
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCC
Q 036352 225 KAVISVPACFNEAQREAIKYAGDIAGLD 252 (493)
Q Consensus 225 ~vvitVP~~~~~~~r~~l~~a~~~aGl~ 252 (493)
.+++-+|..++...-..+.+++...|++
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~ 159 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGIN 159 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCC
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCc
Confidence 4555589999998888888888877753
No 122
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=46.34 E-value=46 Score=33.94 Aligned_cols=90 Identities=17% Similarity=0.238 Sum_probs=58.4
Q ss_pred hhhhhhhhhhh---cccccccccccccccccccHHHHHhhccccCCCCCchhhhHHHHHhhhhhccccCCCCCCceEEEE
Q 036352 16 KTLEKYEQLCE---LSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGID 92 (493)
Q Consensus 16 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivGID 92 (493)
.+|.++.++|+ ..+-.++ -|||--.-.++.+|++.|++..--.-....--.+..++++.....+. .....+-||
T Consensus 67 ~~L~~f~~~~~~~~v~~v~~v-ATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~--~~~~~lviD 143 (513)
T 1u6z_A 67 NCLSLFAERLQGFSPASVCIV-GTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQP--EKGRKLVID 143 (513)
T ss_dssp HHHHHHHHHTTTCCGGGEEEE-ECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSC--CCSCEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEE-ecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhcc--CCCCEEEEE
Confidence 46777887773 3455556 56666667899999999999751112333333334455444433322 122589999
Q ss_pred cCCccEEEEEEeCCce
Q 036352 93 LGTTYSRVAVMQGEDP 108 (493)
Q Consensus 93 lGTt~s~va~~~~~~~ 108 (493)
+|...|-+++.+++.+
T Consensus 144 IGGGStEl~~~~~~~~ 159 (513)
T 1u6z_A 144 IGGGSTELVIGENFEP 159 (513)
T ss_dssp ECSSCEEEEEEETTEE
T ss_pred ECCCcEEEEEEeCCee
Confidence 9999999999887765
No 123
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=45.98 E-value=37 Score=34.18 Aligned_cols=135 Identities=17% Similarity=0.192 Sum_probs=0.0
Q ss_pred CCCCCCceEEEEcCCccEEEEEEeCCceE----EEEccCCCccccCCCcccceEEEEccCCcceecHhHhhhhhcCcCch
Q 036352 81 SSKSQGNVLGIDLGTTYSRVAVMQGEDPV----VIEEVEGGRYTKKSFRSMPSVVFFKPNGESWVGRQANMMTSLYPSRA 156 (493)
Q Consensus 81 ~~~~~~~ivGIDlGTt~s~va~~~~~~~~----vi~~~~g~~~~~~~~~~iPS~i~~~~~~~~~~G~~A~~~~~~~~~~~ 156 (493)
.....+.+++||||.||.+|+.++=+... .+....... .+|. ...-|...
T Consensus 72 ~G~E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~-------~Ip~--------~l~~gt~~----------- 125 (470)
T 3f9m_A 72 EGSEVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMY-------SIPE--------DAMTGTAE----------- 125 (470)
T ss_dssp CCCCCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEE-------ECCH--------HHHSSBHH-----------
T ss_pred CCCcceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEee-------cCCh--------HhccCCHH-----------
Q ss_pred hhcchhhhCCCCCCchhhcccCCeEEeCCCCceEEEeCCeEeCHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCCC--
Q 036352 157 LFDTKHLVGTVYDSSKVQTSLYPKIVRGFKGEAWVETEFGIFSPAKIQAFILAKMRAIGEVYLKESATKAVISVPACF-- 234 (493)
Q Consensus 157 ~~~~k~~lg~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~v~~~~L~~l~~~~~~~~~~~~~~vvitVP~~~-- 234 (493)
...+.++..+....+.-...-..-+-.+.++.|..-
T Consensus 126 ------------------------------------------eLFd~IA~~i~~fl~~~~~~~~~lpLGfTFSFP~~Q~s 163 (470)
T 3f9m_A 126 ------------------------------------------MLFDYISECISDFLDKHQMKHKKLPLGFTFSFPVRHED 163 (470)
T ss_dssp ------------------------------------------HHHHHHHHHHHHHHHHTTCSSSCCEEEEEECSCEEEEE
T ss_pred ------------------------------------------HHHHHHHHHHHHHHhhccccccccceEEEEeccccccC
Q ss_pred -------------------CHHHHHHHHHHHHHcC---CCeeeeccchHHHHHHhcccCCCCeEEEEEeC-Ce
Q 036352 235 -------------------NEAQREAIKYAGDIAG---LDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GT 284 (493)
Q Consensus 235 -------------------~~~~r~~l~~a~~~aG---l~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gT 284 (493)
...-.+.|++|+++.| ++++.++++.+|..++..+.. +.+.+-+=+| ||
T Consensus 164 l~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~-~~~~iGlI~GTGt 235 (470)
T 3f9m_A 164 IDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED-HQCEVGMIVGTGC 235 (470)
T ss_dssp TTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC-TTEEEEEEESSSE
T ss_pred CCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC-CCceEEEEEecCC
No 124
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=45.83 E-value=17 Score=34.23 Aligned_cols=64 Identities=16% Similarity=0.180 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCC--cHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhh
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGC--VPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~--~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
...++++..+.+-..+...-. . ++..|+|.||.+. .|.+.+.+++.+ .. |..+.+.||+++|..
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i----~~------~~~~~~~GAa~la~~ 293 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL----VA------PQGDSAQGALLLLQR 293 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC----CC------CSSCHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc----cC------CCCCHHHHHHHHHhh
Confidence 344555555555555554422 2 5678999998764 466667776642 11 446678999998753
No 125
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=45.53 E-value=14 Score=34.41 Aligned_cols=23 Identities=17% Similarity=0.339 Sum_probs=18.7
Q ss_pred CCCceEEEEcCCccEEEEEEe-CC
Q 036352 84 SQGNVLGIDLGTTYSRVAVMQ-GE 106 (493)
Q Consensus 84 ~~~~ivGIDlGTt~s~va~~~-~~ 106 (493)
.+.+.+.||+|+|+++.++++ ++
T Consensus 21 ~~~M~L~IDiGNT~ik~g~~~~~~ 44 (271)
T 2f9w_A 21 MASMILELDCGNSLIKWRVIEGAA 44 (271)
T ss_dssp --CEEEEEEECSSCEEEEEEETTT
T ss_pred ccCcEEEEEeCCCeeEEEEEeCCC
Confidence 335689999999999999998 55
No 126
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=43.15 E-value=50 Score=30.49 Aligned_cols=45 Identities=16% Similarity=0.290 Sum_probs=36.8
Q ss_pred CCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHH
Q 036352 417 KDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 417 ~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
..+|.|+| |.+.+|++.+.+++.+|.++.. .||.+++|.-+.-+-
T Consensus 177 ~g~D~iVL--GCTh~pll~~~i~~~~~~~v~v----IDs~~~~a~~~~~~l 221 (269)
T 3ist_A 177 TKIDTVIL--GCTHYPLLKPIIENFMGDGVAV----INSGEETASEVSALL 221 (269)
T ss_dssp SCCCEEEE--CSTTGGGGHHHHHHHHCTTSEE----ECTHHHHHHHHHHHH
T ss_pred CCCCEEEE--CCCCHHHHHHHHHHHcCCCCeE----ECcHHHHHHHHHHHH
Confidence 35889888 8999999999999999876654 889998887766443
No 127
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=42.45 E-value=6.1 Score=37.11 Aligned_cols=60 Identities=23% Similarity=0.143 Sum_probs=36.9
Q ss_pred CCCcEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeeeeccchHHHHHHhcccCCCCeEEEEEeC-Cee
Q 036352 222 SATKAVISVPACFNEAQREAIKYAGD-IAGL-DIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTF 285 (493)
Q Consensus 222 ~~~~vvitVP~~~~~~~r~~l~~a~~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTt 285 (493)
++..+.|++|..- ......+++..+ ..++ ..+.+.++..+|+++-. .....+++=+| |.-
T Consensus 59 ~i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~---g~~~~v~v~~GTGig 121 (291)
T 1zbs_A 59 SIRAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALC---GDSEGIACILGTGSN 121 (291)
T ss_dssp TCCEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHT---TTSCEEEEEESSSEE
T ss_pred cccEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhc---CCCCcEEEEecCChh
Confidence 3567889999864 222234555444 3454 36789999999998743 22344555578 863
No 128
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=41.76 E-value=11 Score=35.19 Aligned_cols=66 Identities=8% Similarity=-0.020 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
.++++..+.+-..+ .... ..++..|+|.||.+.. +.+.+++.+..+... ...+..+.+.||++++.
T Consensus 212 ~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~---i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 212 QLVMNSFIAFFRRN-VMQY-DYKQYPVHFIGSIAYC--YKEILQDAARQTGIQ---IGKILQSPMEGLIQYHS 277 (291)
T ss_dssp HHHHHHHHHHHTTT-GGGS-CTTTSCEEECSHHHHH--THHHHHHHTTTTTCC---EEEECSCTHHHHHTTSS
T ss_pred HHHHHHHHHHHHHH-hccc-CCCCceEEEECcHHHH--HHHHHHHHHhcCCcE---EeecCCCHHHHHHHHHH
Confidence 34444444444444 2221 1256789999988765 667777776442222 22345677899998875
No 129
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=41.73 E-value=39 Score=32.93 Aligned_cols=73 Identities=14% Similarity=0.115 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHH-HHHHHHHHhCCCC-CCCCCCCChhHHHHhhHHHHHhh
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPS-VREYMELFFGKSP-LKSPRGVTPDEAVVIGAAIHGEK 469 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~-v~~~l~~~fg~~~-~~~~~~~~p~~aVA~GAa~~a~~ 469 (493)
++.....+...+...+... ..+++.|+|.||.+..+. +.+.+.+.+.... ..+.......++.+.||+..+..
T Consensus 274 l~~~~~~la~~i~~l~~~l---~~~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 274 YRAMAYQIAKWIGKMAAVL---KGEVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLRG 348 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHT---TTCCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHcC
Confidence 3333444444444444432 125789999999886543 7787877774321 11011333446899999988754
No 130
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=40.95 E-value=28 Score=34.35 Aligned_cols=42 Identities=19% Similarity=0.325 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCC-CcHHHHHHHHHHh
Q 036352 397 LIEETGAICQKCLEVANITRKDLDGILVVGGLG-CVPSVREYMELFF 442 (493)
Q Consensus 397 ~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~f 442 (493)
++.++.+.|-..... ...+|.|+++||-+ +.+.+++.+.+.+
T Consensus 313 f~yri~k~IGa~aa~----LggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 313 FVHRIARHIAGHAAS----LHRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHTT----CSSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHH----hCCCCEEEECccccccCHHHHHHHHhhH
Confidence 444444444444332 34699999999999 9999999998765
No 131
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=40.19 E-value=13 Score=35.03 Aligned_cols=55 Identities=11% Similarity=0.044 Sum_probs=34.8
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHHHc--CCCeeeeccchHHHHHHhcccCCCCeEEEEEeC-Cee
Q 036352 224 TKAVISVPACFNEAQREAIKYAGDIA--GLDIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GTF 285 (493)
Q Consensus 224 ~~vvitVP~~~~~~~r~~l~~a~~~a--Gl~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gTt 285 (493)
..+.|++|...+......+.. .. ++ .+.+.++..|++++.. .....+++=+| |..
T Consensus 77 ~~igig~pG~v~~~~~~~l~~---~~~~~~-pv~v~NDa~aaa~ge~---~~~~~v~v~~GTGig 134 (305)
T 1zc6_A 77 CAIGLGLSGVHNRQWAGEFES---QAPGFA-RLSLATDGYTTLLGAH---GGQPGIIVALGTGSI 134 (305)
T ss_dssp EEEEEEESCCCTTSHHHHHHH---TCCCCS-EEEEECHHHHHHHHHT---TTSSEEEEEESSSEE
T ss_pred ceEEEEecCCCchHHHHHHHH---hCCCCc-eEEEECCHHHHHHhhc---CCCCeEEEEecCCeE
Confidence 357899998776544333322 22 33 4588899999888742 13346667789 873
No 132
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=39.59 E-value=14 Score=38.69 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=20.0
Q ss_pred CEEEEecCCCCcHHHHHHHHHHh
Q 036352 420 DGILVVGGLGCVPSVREYMELFF 442 (493)
Q Consensus 420 ~~VvLvGG~s~~p~v~~~l~~~f 442 (493)
+.|++|||++.+|++.-.|.+.+
T Consensus 502 ~nilivGggski~g~~~~L~dri 524 (655)
T 4am6_A 502 SNILIVGGSSKIPALDFILTDRI 524 (655)
T ss_dssp TCEEEESTTCCCTTHHHHHHHHH
T ss_pred hcEEEEcCcccCccHHHHHHHHH
Confidence 78999999999999888777654
No 133
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=37.39 E-value=68 Score=31.05 Aligned_cols=40 Identities=25% Similarity=0.266 Sum_probs=26.7
Q ss_pred cCCCeeeeccchHHHHHHhcccCC-CCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDKR-DGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~~-~~~vlVvDiG-gTtdvsv~ 290 (493)
.|++ +.+.++..|+|++..+... ...++++-+| | +-.+++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEE
Confidence 4776 5899999999987543221 2677888888 7 334444
No 134
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=37.36 E-value=36 Score=31.66 Aligned_cols=43 Identities=14% Similarity=0.244 Sum_probs=35.8
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHH
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIH 466 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~ 466 (493)
.+|.|+| |.+.+|++.+.+++.+|.++.. .||.+++|.-+.-+
T Consensus 196 g~D~iIL--GCTh~PlL~~~i~~~~~~~v~l----IDs~~~~A~~~~~~ 238 (274)
T 3uhf_A 196 TPDALIL--ACTHFPLLGRSLSKYFGDKTKL----IHSGDAIVEFLKER 238 (274)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHCTTCEE----EEHHHHHHHHHHHH
T ss_pred CCCEEEE--CCCChHHHHHHHHHHcCCCCEE----EcCHHHHHHHHHHH
Confidence 5789988 9999999999999999876654 89998888776544
No 135
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=37.24 E-value=27 Score=34.10 Aligned_cols=24 Identities=21% Similarity=0.468 Sum_probs=20.0
Q ss_pred CceEEEEcCCccEEEEEEeCCceEEE
Q 036352 86 GNVLGIDLGTTYSRVAVMQGEDPVVI 111 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~~~~vi 111 (493)
+.++|||+|.|++++++++.+ +++
T Consensus 2 ~~vlgidiGgt~ik~al~d~~--~il 25 (381)
T 1saz_A 2 FRILTINPGSTSTKLSIFEDE--RMV 25 (381)
T ss_dssp CEEEEEEECSSEEEEEEEETT--EEE
T ss_pred CeEEEEECCccceeEEEEecc--hhe
Confidence 358999999999999999865 444
No 136
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=35.87 E-value=67 Score=30.14 Aligned_cols=70 Identities=16% Similarity=0.255 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCc-----HHHHHHHHHHhCCCC----CCCCCCCChhHHHHhhHHH
Q 036352 395 SELIEETGAICQKCLEVANITRKDLDGILVVGGLGCV-----PSVREYMELFFGKSP----LKSPRGVTPDEAVVIGAAI 465 (493)
Q Consensus 395 ~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~-----p~v~~~l~~~fg~~~----~~~~~~~~p~~aVA~GAa~ 465 (493)
..+++.+...+...+.-. +++.|+|-||.+.. +.+.+.+++.+.... ..+....-.+.+.++|||.
T Consensus 221 ~~~~~~~a~~la~l~~~~-----dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~ 295 (310)
T 3htv_A 221 QSLLENAARAIATSINLF-----DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAI 295 (310)
T ss_dssp HHHHHHHHHHHHHHHHHH-----CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhh-----CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHH
Confidence 334444444444444432 45799999998765 467777776652111 1111123356789999998
Q ss_pred HHhh
Q 036352 466 HGEK 469 (493)
Q Consensus 466 ~a~~ 469 (493)
++..
T Consensus 296 la~~ 299 (310)
T 3htv_A 296 LAHQ 299 (310)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 137
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=34.62 E-value=53 Score=32.32 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCC-CcHHHHHHHHHHh
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG-CVPSVREYMELFF 442 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~f 442 (493)
+++-++.++.+.|-...... ..+|.|+++||-+ +.+.+++.+.+.+
T Consensus 301 A~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 301 ALEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 34445556666666555543 3589999999999 9999999998765
No 138
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=34.36 E-value=50 Score=30.94 Aligned_cols=51 Identities=18% Similarity=0.137 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
+++...+.+.+.++++|+++++++.+|+.|+.=|++.++ -+.+.+.||.+.
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~~ 262 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMSM 262 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCCH
Confidence 344556677889999999999999999999988876553 567888887654
No 139
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=34.24 E-value=37 Score=32.83 Aligned_cols=18 Identities=33% Similarity=0.410 Sum_probs=15.7
Q ss_pred CceEEEEcCCccEEEEEE
Q 036352 86 GNVLGIDLGTTYSRVAVM 103 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~ 103 (493)
..++.||+||+.+.+-++
T Consensus 3 ~~~avID~GSns~Rl~I~ 20 (353)
T 3aap_A 3 SCIAVIDAGSTGSRLHIY 20 (353)
T ss_dssp EEEEEEEECSSCEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEE
Confidence 358999999999999876
No 140
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=33.41 E-value=1.2e+02 Score=30.55 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=35.3
Q ss_pred CCeEEEEEeC-CeeEEEEEEEeCC-eEEEE----EecCCCCCc-hHHHHHHHHHHHHHHHhh
Q 036352 273 DGLFAVYSFG-GTFEFSILEISNG-VIKVK----AKRKSLSHG-GLDFDLLLVRHLWREFTR 327 (493)
Q Consensus 273 ~~~vlVvDiG-gTtdvsv~~~~~~-~~~vl----~~~~~~~~G-G~~id~~l~~~l~~~~~~ 327 (493)
.+.++.+|+| +++-+.++++.+. .+++. ........| |+.+=..|++.+.+-+.+
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~~~~~Ip~~~~~~~~~~lfd~Ia~~i~~fl~~ 140 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTTQNKYRLPDHLRTGTSEQLWSFIAKCLKEFVDE 140 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEEEEEEECCTTGGGSBHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEEEEEEecCchhccCCHHHHHHHHHHHHHHHHHH
Confidence 4689999999 9999999999754 23333 223333334 666666666666554443
No 141
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=32.93 E-value=1.1e+02 Score=28.46 Aligned_cols=69 Identities=10% Similarity=0.015 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcH----HHHHHHHHHhCCCCC----------CCCCCCChhHHHHh
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVP----SVREYMELFFGKSPL----------KSPRGVTPDEAVVI 461 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p----~v~~~l~~~fg~~~~----------~~~~~~~p~~aVA~ 461 (493)
...+.+-..+...+.-. +++.|+|-||.+..+ .+++.+.+....... .+....-...+.++
T Consensus 207 ~~~~~La~~i~nl~~~l-----dPe~IviGGgi~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~~~I~~s~lg~~a~l~ 281 (302)
T 3epq_A 207 LEGYYIAQALAQYILIL-----APXXIILGGGVMQQXQVFSYIYQYVPKIMNSYLDFSELSDDISDYIVPPRLGSNAGII 281 (302)
T ss_dssp HHHHHHHHHHHHHHHHT-----CCSCEEEESSGGGCTHHHHHHHHHHHHHHTTCSCCGGGTTTGGGTEECCTTGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHH-----CchhhhcCchhhhhHHHHHHHHHHHHHHHhhhccCcccccccCceEEECCcCChHHHH
Confidence 33344444444444432 467899999887654 455555554321000 01113445679999
Q ss_pred hHHHHHhh
Q 036352 462 GAAIHGEK 469 (493)
Q Consensus 462 GAa~~a~~ 469 (493)
|||.++..
T Consensus 282 GAa~l~~~ 289 (302)
T 3epq_A 282 GTLVLAHQ 289 (302)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988764
No 142
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=30.77 E-value=43 Score=30.58 Aligned_cols=40 Identities=28% Similarity=0.322 Sum_probs=27.0
Q ss_pred cCCCeeeeccchHHHHHHhcccC---C-CCeEEEEEeC-CeeEEEEE
Q 036352 249 AGLDIQGVVEDPVAAALAYGLDK---R-DGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~~~~~~---~-~~~vlVvDiG-gTtdvsv~ 290 (493)
.|++ +.+.++..|+|++..... . .+.++++-+| | +-.+++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4777 489999999999854422 2 2367778888 7 444444
No 143
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=30.74 E-value=3.5 Score=38.83 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=33.0
Q ss_pred CcEEEEeCCCCCHHHHHHHHHHHH-HcCC-CeeeeccchHHHHHHhcccCCCCeEEEEEeC-Ce
Q 036352 224 TKAVISVPACFNEAQREAIKYAGD-IAGL-DIQGVVEDPVAAALAYGLDKRDGLFAVYSFG-GT 284 (493)
Q Consensus 224 ~~vvitVP~~~~~~~r~~l~~a~~-~aGl-~~~~li~Ep~Aaa~~~~~~~~~~~vlVvDiG-gT 284 (493)
..+.|++|..- ......+++..+ ..++ ..+.+.++..+|+++-. .....+++=+| |.
T Consensus 59 ~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~---g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 59 NAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC---GQKAGIACILGTGS 118 (291)
T ss_dssp --CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT---TTSCBEEEEESSSE
T ss_pred cEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc---CCCCcEEEEeCCCh
Confidence 46788888753 222224544443 3464 35789999999998653 22233444488 87
No 144
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=29.56 E-value=30 Score=32.65 Aligned_cols=21 Identities=33% Similarity=0.521 Sum_probs=18.2
Q ss_pred CceEEEEcCCccEEEEEEeCC
Q 036352 86 GNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 86 ~~ivGIDlGTt~s~va~~~~~ 106 (493)
.+++|||+|.|++++++.+..
T Consensus 7 ~~~lgiDiGgt~i~~~l~d~~ 27 (310)
T 3htv_A 7 NVVAGVDMGATHIRFCLRTAE 27 (310)
T ss_dssp EEEEEEEECSSEEEEEEEETT
T ss_pred CEEEEEEeCCCEEEEEEECCC
Confidence 569999999999999988643
No 145
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=29.46 E-value=1.1e+02 Score=28.92 Aligned_cols=22 Identities=36% Similarity=0.463 Sum_probs=18.7
Q ss_pred CCceEEEEcCCccEEEEEEeCC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQGE 106 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~~ 106 (493)
..+++|||+|.|++++++++..
T Consensus 29 ~~~~lgiDiGgt~i~~~l~d~~ 50 (343)
T 2yhw_A 29 TLSALAVDLGGTNLRVAIVSMK 50 (343)
T ss_dssp EEEEEEEEECSSEEEEEEEETT
T ss_pred CcEEEEEEECCCEEEEEEECCC
Confidence 3579999999999999988643
No 146
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=29.32 E-value=48 Score=33.83 Aligned_cols=89 Identities=18% Similarity=0.281 Sum_probs=57.2
Q ss_pred hhhhhhhhhhh---cccccccccccccccccccHHHHHhhccccCCCCCchhhhHHHHHhhhhhccccCCCCCCceEEEE
Q 036352 16 KTLEKYEQLCE---LSRAYPLAKTSASSVSQGCREFLKLANKVVSPEPKFVPAMHHCLVSSMSLARNFSSKSQGNVLGID 92 (493)
Q Consensus 16 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivGID 92 (493)
.+|.++.++|+ ..+-.++ -|||--.-.|+.+|++.|++..--.-....--.+..++++.....+.. ...+-||
T Consensus 71 ~~L~~F~~~~~~~~v~~v~~v-ATsA~R~A~N~~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~---~~~lvvD 146 (508)
T 3hi0_A 71 MALRRFHVLSEQAQAQKLYVL-ATAAAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ---PDGIAGD 146 (508)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-ECTHHHHSTTHHHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS---CEEEEEE
T ss_pred HHHHHHHHHHHhCCCCeEEEE-eeHHHHcCcCHHHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC---CCeEEEE
Confidence 35667777775 3445555 566666778999999999986511113333334444554444333221 2358899
Q ss_pred cCCccEEEEEEeCCce
Q 036352 93 LGTTYSRVAVMQGEDP 108 (493)
Q Consensus 93 lGTt~s~va~~~~~~~ 108 (493)
+|..+|-+++.+++.+
T Consensus 147 IGGGStEl~~~~~~~~ 162 (508)
T 3hi0_A 147 LGGGSLELIDIKDKSC 162 (508)
T ss_dssp ECSSCEEEEEEETTEE
T ss_pred eCCCceEEEEeeCCee
Confidence 9999999999988765
No 147
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=29.10 E-value=38 Score=25.39 Aligned_cols=29 Identities=21% Similarity=0.329 Sum_probs=25.8
Q ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCCe
Q 036352 225 KAVISVPACFNEAQREAIKYAGDIAGLDI 253 (493)
Q Consensus 225 ~vvitVP~~~~~~~r~~l~~a~~~aGl~~ 253 (493)
.-.++.|+.++..+|..+.+.|+..||..
T Consensus 33 ~~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 33 KMQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp CSEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred CcEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 35788999999999999999999999854
No 148
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=28.47 E-value=65 Score=30.21 Aligned_cols=50 Identities=10% Similarity=-0.014 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
++.....+.+.++++|+++++++++|+.|+.-|++.++ -+.+.+.||.+.
T Consensus 215 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~~ 264 (322)
T 1ub7_A 215 FKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLPW 264 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCCG
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCCH
Confidence 34455677888999999999999999999988876543 556888887654
No 149
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=28.30 E-value=69 Score=29.73 Aligned_cols=48 Identities=8% Similarity=0.131 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 396 ELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 396 ~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
...+.+.+.++++|+++++++.+|+.|++=|+++++ .+.+.+.||.+.
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~~ 254 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIPK 254 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCCH
Confidence 445677788999999999999999999998876653 456788887654
No 150
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=27.80 E-value=2.4e+02 Score=28.09 Aligned_cols=54 Identities=13% Similarity=0.040 Sum_probs=36.2
Q ss_pred CCeEEEEEeC-CeeEEEEEEEeCCe---EEEEEecCCCCC---chHHHHHHHHHHHHHHHh
Q 036352 273 DGLFAVYSFG-GTFEFSILEISNGV---IKVKAKRKSLSH---GGLDFDLLLVRHLWREFT 326 (493)
Q Consensus 273 ~~~vlVvDiG-gTtdvsv~~~~~~~---~~vl~~~~~~~~---GG~~id~~l~~~l~~~~~ 326 (493)
.+.++.+|+| +++-+.++...... ++.......... +++.+-..|++.+.+-+.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~~~~~ 120 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNAAFSS 120 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHHHHHh
Confidence 6678999999 99999999987665 222222222232 677777777777666543
No 151
>3nuw_A 2-OXO-3-deoxygalactonate kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.09A {Klebsiella pneumoniae} PDB: 3r1x_A*
Probab=27.73 E-value=70 Score=29.99 Aligned_cols=46 Identities=17% Similarity=0.185 Sum_probs=35.1
Q ss_pred CEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHhhh
Q 036352 420 DGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGEKF 470 (493)
Q Consensus 420 ~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~~~ 470 (493)
..|.|+|........+..|+. +|.++.. .+++.++..|....+..+
T Consensus 248 ~~v~LiG~~~L~~~Y~~AL~~-~G~~~~~----~d~~~~~~~GL~~~~~~~ 293 (295)
T 3nuw_A 248 QAISLVAGSSLTSRYQQAFAA-IGREVSA----VAGDTAFQTGIRSIAYAV 293 (295)
T ss_dssp SCEEEEECHHHHHHHHHHHHH-TTCCEEE----EEHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCHHHHHHHHHHHHH-cCCCcee----cCHHHHHHHHHHHHHHHh
Confidence 479999998888888888864 6776554 689999999987665543
No 152
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=26.29 E-value=89 Score=29.54 Aligned_cols=50 Identities=16% Similarity=0.083 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCC
Q 036352 395 SELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPL 447 (493)
Q Consensus 395 ~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~ 447 (493)
+...+.+.+.++++|++++++..+|+.|+.=|++.+ +-+.+.+.||.+..
T Consensus 227 ~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~---~~d~i~~~lg~~~~ 276 (339)
T 1mzj_A 227 RWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLR---IIDVLVDRLGVPEH 276 (339)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHH---HHHHHHHHHTCCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---HHHHHHHHhCCCcc
Confidence 345567778899999999999999999998877654 35568888876544
No 153
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=25.75 E-value=53 Score=31.89 Aligned_cols=22 Identities=23% Similarity=0.273 Sum_probs=19.1
Q ss_pred CCCCceEEEEcCCccEEEEEEe
Q 036352 83 KSQGNVLGIDLGTTYSRVAVMQ 104 (493)
Q Consensus 83 ~~~~~ivGIDlGTt~s~va~~~ 104 (493)
+....++|||+|.|++.+++.+
T Consensus 6 ~d~~~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 6 NDNRIVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp TCCCEEEEEECSSSEEEEEEEE
T ss_pred CCCCEEEEEEECcceEEEEEEE
Confidence 3456799999999999999887
No 154
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=25.40 E-value=41 Score=32.52 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=18.1
Q ss_pred CCceEEEEcCCccEEEEEEeC
Q 036352 85 QGNVLGIDLGTTYSRVAVMQG 105 (493)
Q Consensus 85 ~~~ivGIDlGTt~s~va~~~~ 105 (493)
+.+++|||+|.|++.+++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 357999999999999998864
No 155
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=24.79 E-value=99 Score=28.70 Aligned_cols=50 Identities=20% Similarity=0.146 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 394 VSELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 394 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
.+.....+.+.++++|+++++++.+|+.|++-+++.+ +-+.+.+.||.+.
T Consensus 207 ~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~---~~d~~~~~lg~~~ 256 (313)
T 1zow_A 207 FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIR---IMESARERLGISK 256 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---HHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHhCCCH
Confidence 3445567788899999999999999999998877654 3456778887654
No 156
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=24.52 E-value=1.8e+02 Score=26.14 Aligned_cols=55 Identities=15% Similarity=0.162 Sum_probs=36.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHH
Q 036352 399 EETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIH 466 (493)
Q Consensus 399 ~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~ 466 (493)
+.+.+.+.+.++. ..+|.|+| |.+.+|++.+.|++.+|.+ -.||-.+++.=+..+
T Consensus 160 ~~l~~~~~~~~~~-----~gad~IVL--GCTh~p~l~~~i~~~~gVp------vID~~~a~~~~~~~l 214 (245)
T 3qvl_A 160 EKVRERCIRALKE-----DGSGAIVL--GSGGMATLAQQLTRELRVP------VIDGVSAAVKMVESL 214 (245)
T ss_dssp HHHHHHHHHHHHH-----SCCSEEEE--CCGGGGGGHHHHHHHHTSC------EECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-----cCCCEEEE--CCCChHHHHHHHHHHcCCe------EEccHHHHHHHHHHH
Confidence 3444444444443 24778888 7789999999999999833 367877776555433
No 157
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=24.26 E-value=1.4e+02 Score=27.45 Aligned_cols=58 Identities=17% Similarity=0.218 Sum_probs=40.2
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 402 GAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 402 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
.+.+.+.++.. ... ++.|+| |.+.+|.+.+.+++.++..+.. .||-.++|.=+.-+..
T Consensus 171 ~~~l~~~~~~l--~~~-~d~iVL--GCTh~p~l~~~i~~~~~~~vpv----iDs~~~~a~~~~~~l~ 228 (273)
T 2oho_A 171 KKIVYDSLAPL--VGK-IDTLVL--GCTHYPLLRPIIQNVMGPSVKL----IDSGAECVRDISVLLN 228 (273)
T ss_dssp HHHHHHHHTTT--TTS-CSEEEE--CSTTGGGGHHHHHHHHCTTSEE----EEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--Hhc-CCEEEE--cCCCHHHHHHHHHHHhCCCCEE----ECcHHHHHHHHHHHHH
Confidence 34444555443 223 888888 8899999999999999765543 7888888766654433
No 158
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=24.13 E-value=1.4e+02 Score=27.66 Aligned_cols=58 Identities=10% Similarity=0.139 Sum_probs=40.4
Q ss_pred HHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 403 AICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 403 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
+.+.+.++... ...++.|+| |.+.+|++.+.+++.++..+.. .||-.++|.=+.-+..
T Consensus 183 ~~l~~~~~~l~--~~g~D~IVL--GCTh~p~l~~~i~~~l~~~vpv----IDs~~a~a~~~~~~l~ 240 (286)
T 2jfq_A 183 IVIHQTLKRWR--NSESDTVIL--GCTHYPLLYKPIYDYFGGKKTV----ISSGLETAREVSALLT 240 (286)
T ss_dssp HHHHHHHGGGT--TCSCSEEEE--ESSSGGGGHHHHHHHTTTCSEE----EEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--hCCCCEEEE--cCcCHHHHHHHHHHHcCCCCEE----ECcHHHHHHHHHHHHH
Confidence 33444444432 236889998 8899999999999998755543 7888888876654433
No 159
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=24.05 E-value=96 Score=29.18 Aligned_cols=49 Identities=6% Similarity=0.032 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCC
Q 036352 395 SELIEETGAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSP 446 (493)
Q Consensus 395 ~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~ 446 (493)
+-..+.+.+.++++|+++++++.+|+.+++=+++.+ +-+.+.+.||.+.
T Consensus 220 ~~~~~~~~~~i~~aL~~agl~~~did~~~~H~~~~~---~~d~~~~~lg~~~ 268 (331)
T 2x3e_A 220 GQAVTQMSDSVRRVLDRVGWQASDLHHLVPHQANTR---ILAAVADQLDLPV 268 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH---HHHHHHHHHTCCG
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---HHHHHHHHcCCCH
Confidence 345567778899999999999999999998777654 3566888887654
No 160
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=23.12 E-value=1.4e+02 Score=31.18 Aligned_cols=36 Identities=8% Similarity=0.198 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCCC
Q 036352 395 SELIEETGAICQKCLEVANITRKDLDGILVVGGLGC 430 (493)
Q Consensus 395 ~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~ 430 (493)
+-+++.+.+++.+.+++++++..+|..++++|-.+-
T Consensus 266 ~~v~~~in~li~~l~~~~~i~~~~I~~~~v~GNt~M 301 (631)
T 3zyy_X 266 KAVLSTINELIFQLCKEHGVEKKEIMAAVVAGNTTM 301 (631)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHeeEEEEEccHHH
Confidence 345667778888888889999999999999986543
No 161
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=22.89 E-value=81 Score=30.38 Aligned_cols=18 Identities=11% Similarity=0.087 Sum_probs=14.6
Q ss_pred cCCCeeeeccchHHHHHH
Q 036352 249 AGLDIQGVVEDPVAAALA 266 (493)
Q Consensus 249 aGl~~~~li~Ep~Aaa~~ 266 (493)
.++..+.+.++..|+|++
T Consensus 127 ~~~~pv~v~NDa~aaalg 144 (373)
T 2q2r_A 127 FPPGHSAILNDLEAGGFG 144 (373)
T ss_dssp SCTTSEEEEEHHHHHHHH
T ss_pred cCCCCEEEEccHhHHhcc
Confidence 366456899999999998
No 162
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=22.84 E-value=45 Score=30.82 Aligned_cols=42 Identities=17% Similarity=0.075 Sum_probs=27.9
Q ss_pred HHcCCCeeeeccchHHHHHHhcccC-CCCeEEEEEeC-CeeEEEEE
Q 036352 247 DIAGLDIQGVVEDPVAAALAYGLDK-RDGLFAVYSFG-GTFEFSIL 290 (493)
Q Consensus 247 ~~aGl~~~~li~Ep~Aaa~~~~~~~-~~~~vlVvDiG-gTtdvsv~ 290 (493)
+..|++ +.+.++..|+|++..... ..++++++-+| | +-.+++
T Consensus 92 ~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 92 SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEE
T ss_pred HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEE
Confidence 345776 488999999998865421 24567888888 7 334443
No 163
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=22.31 E-value=1.3e+02 Score=27.40 Aligned_cols=45 Identities=11% Similarity=0.199 Sum_probs=35.0
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
.++.|+| |.+.+|++.+.+++.++..+.. .||-.++|.=+.-+..
T Consensus 176 ~~d~iVL--GCTh~p~l~~~i~~~~~~~vpv----iDs~~~~a~~~~~~l~ 220 (267)
T 2gzm_A 176 DIDTLIL--GCTHYPILGPVIKQVMGDKVQL----ISSGDETAREVSTILY 220 (267)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHCTTSEE----EEHHHHHHHHHHHHHH
T ss_pred CCCEEEE--cccChHHHHHHHHHHcCCCCEE----ECcHHHHHHHHHHHHH
Confidence 5788888 8899999999999999755443 7888888876655443
No 164
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=22.30 E-value=1.1e+02 Score=28.40 Aligned_cols=59 Identities=17% Similarity=0.237 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCCCCCCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHHh
Q 036352 402 GAICQKCLEVANITRKDLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHGE 468 (493)
Q Consensus 402 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a~ 468 (493)
.+.+.+.++.. ....++.|+| |.+.+|++.+.+++.++..+.. .||-.++|.=+.-+..
T Consensus 183 ~~~l~~~l~~l--~~~g~D~IVL--GCTh~p~l~~~i~~~l~~~vpv----IDs~~a~a~~~~~~l~ 241 (290)
T 2vvt_A 183 KKIVAETLQAL--QLKGLDTLIL--GCTHYPLLRPVIQNVMGSHVTL----IDSGAETVGEVSMLLD 241 (290)
T ss_dssp HHHHHHHHGGG--TTSCCSEEEE--CSTTGGGGHHHHHHHHCTTCEE----EEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH--HhCCCCEEEE--CCcCHHHHHHHHHHHcCCCCeE----ECcHHHHHHHHHHHHH
Confidence 33444555432 2246889988 8899999999999999755543 7888888876665544
No 165
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=21.66 E-value=85 Score=28.92 Aligned_cols=44 Identities=18% Similarity=0.326 Sum_probs=34.8
Q ss_pred CCCEEEEecCCCCcHHHHHHHHHHhCCCCCCCCCCCChhHHHHhhHHHHH
Q 036352 418 DLDGILVVGGLGCVPSVREYMELFFGKSPLKSPRGVTPDEAVVIGAAIHG 467 (493)
Q Consensus 418 ~i~~VvLvGG~s~~p~v~~~l~~~fg~~~~~~~~~~~p~~aVA~GAa~~a 467 (493)
++|.|+| |.+.+|++.+.+++.++..+.. .||-+++|.=+.-+.
T Consensus 180 ~~D~IVL--GCTh~p~l~~~i~~~~~~~v~v----IDs~~~~a~~~~~~l 223 (276)
T 2dwu_A 180 DIDTLIL--GCTHYPLLESYIKKELGEDVTI----ISSAEETAIELSTIL 223 (276)
T ss_dssp CCSEEEE--CSTTGGGGHHHHHHHHCTTSEE----EEHHHHHHHHHHHHH
T ss_pred CCCEEEE--CCCCHHHHHHHHHHHcCCCCeE----ECcHHHHHHHHHHHH
Confidence 5789988 8899999999999999755543 788888877665443
No 166
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=21.18 E-value=1.4e+02 Score=25.49 Aligned_cols=42 Identities=29% Similarity=0.252 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCCEEEEecCCCCcH--HHHHHHHHHhCCCCCC
Q 036352 400 ETGAICQKCLEVANITRKDLDGILVVGGLGCVP--SVREYMELFFGKSPLK 448 (493)
Q Consensus 400 ~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p--~v~~~l~~~fg~~~~~ 448 (493)
.|.+.+++++++ .|.|+.+||.+--+ ...+.+.+.|+.+...
T Consensus 51 ~I~~~l~~a~~~-------~DlVittGG~g~~~~D~T~ea~a~~~~~~l~~ 94 (172)
T 3kbq_A 51 EIGWAFRVALEV-------SDLVVSSGGLGPTFDDMTVEGFAKCIGQDLRI 94 (172)
T ss_dssp HHHHHHHHHHHH-------CSEEEEESCCSSSTTCCHHHHHHHHHTCCCEE
T ss_pred HHHHHHHHHHhc-------CCEEEEcCCCcCCcccchHHHHHHHcCCCeee
Confidence 444555555554 46999999987554 6889999999877654
No 167
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=20.06 E-value=1.2e+02 Score=29.86 Aligned_cols=47 Identities=17% Similarity=0.233 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCEEEEecCCC-CcHHHHHHHHHHhC
Q 036352 393 LVSELIEETGAICQKCLEVANITRKDLDGILVVGGLG-CVPSVREYMELFFG 443 (493)
Q Consensus 393 ~~~~~i~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s-~~p~v~~~l~~~fg 443 (493)
+++-++.++.+.|-......+ .+|.|+++||-+ +.+.+++.+.+.++
T Consensus 301 A~d~f~yri~k~IGa~~a~Lg----gvDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 301 VLEIYDYRIAKYIGAYAAAMN----GVDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT----CCSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHhC----CCCEEEECcccccCCHHHHHHHHhhhh
Confidence 334455566666655555442 589999999999 99999999998764
Done!