Query 036360
Match_columns 118
No_of_seqs 121 out of 1105
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 20:30:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036360.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036360hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ner_A Cytochrome B5 type B; h 99.9 1.8E-28 6.2E-33 160.3 5.1 80 39-118 6-86 (92)
2 1cxy_A Cytochrome B5; helix, b 99.9 1.9E-27 6.4E-32 154.8 6.0 78 40-117 5-87 (90)
3 1cyo_A Cytochrome B5; electron 99.9 7E-28 2.4E-32 157.7 3.9 77 41-117 3-80 (93)
4 1hko_A Cytochrome B5; electron 99.9 1.6E-27 5.4E-32 159.0 5.3 79 40-118 6-85 (104)
5 2ibj_A Cytochrome B5, CYTB5; F 99.9 9E-28 3.1E-32 155.6 3.4 77 41-117 5-82 (88)
6 3lf5_A Cytochrome B5 reductase 99.9 9.7E-28 3.3E-32 155.7 1.5 79 40-118 3-82 (88)
7 1x3x_A Cytochrome B5; hemoprot 99.9 5.7E-27 2E-31 150.1 4.0 76 42-117 3-82 (82)
8 1mj4_A Sulfite oxidase; cytoch 99.9 2.9E-26 9.8E-31 146.8 3.0 75 41-116 3-82 (82)
9 2keo_A Probable E3 ubiquitin-p 99.9 5.7E-27 1.9E-31 158.1 -1.5 79 40-118 21-100 (112)
10 1sox_A Sulfite oxidase; oxidor 99.8 7.7E-21 2.6E-25 154.0 4.4 76 41-117 3-83 (466)
11 1kbi_A Cytochrome B2, L-LCR; f 99.8 2.7E-20 9.2E-25 152.2 4.7 77 40-117 6-85 (511)
12 1j03_A Putative steroid bindin 99.7 6.5E-18 2.2E-22 112.0 3.3 59 43-102 3-65 (102)
No 1
>3ner_A Cytochrome B5 type B; heme, electron transport; HET: HEM; 1.45A {Homo sapiens} SCOP: d.120.1.1 PDB: 1awp_A* 3mus_A* 1b5m_A* 1eue_A* 1icc_A* 1lj0_A* 2i89_A*
Probab=99.95 E-value=1.8e-28 Score=160.28 Aligned_cols=80 Identities=35% Similarity=0.765 Sum_probs=74.2
Q ss_pred CccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchhc-cccCCCccccccCCCCcHHHHHhhhhceeeecc
Q 036360 39 NKASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAIL-AHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLK 117 (118)
Q Consensus 39 ~~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~il-~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~ 117 (118)
.+..+.||++||++|++.++|||+|+|+|||||+|+..||||..++ .++|+|+|+.|....||..|+++|++|+||+|+
T Consensus 6 ~~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~~Hs~~a~~~L~~~~IG~l~ 85 (92)
T 3ner_A 6 ETSVTYYRLEEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSDAREMLKQYYIGDIH 85 (92)
T ss_dssp CCCSCEECHHHHTTCEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTSBCHHHHHHTTCCHHHHHHHGGGEEEEEC
T ss_pred CCCCCeeCHHHHHhhCCCCCEEEEECCEEEEcccccccCCCHHHHHHHhcCCcchHHHHHcCCCHHHHHHHHhCeeEEEC
Confidence 4567899999999999999999999999999999999999999754 899999999998778999999999999999986
Q ss_pred C
Q 036360 118 Q 118 (118)
Q Consensus 118 ~ 118 (118)
+
T Consensus 86 ~ 86 (92)
T 3ner_A 86 P 86 (92)
T ss_dssp G
T ss_pred h
Confidence 4
No 2
>1cxy_A Cytochrome B5; helix, beta-strand, electron transport; HET: HEM; 1.65A {Ectothiorhodospira shaposhnikovii} SCOP: d.120.1.1
Probab=99.94 E-value=1.9e-27 Score=154.76 Aligned_cols=78 Identities=35% Similarity=0.753 Sum_probs=71.2
Q ss_pred ccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchh-ccccCCCcccccc----CCCCcHHHHHhhhhceee
Q 036360 40 KASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAI-LAHAGDDSTEGFY----GPQHATRVFDMIDDFYIG 114 (118)
Q Consensus 40 ~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~i-l~~~G~D~T~~f~----~~~Hs~~a~~~l~~~~IG 114 (118)
...+.||++||++|+++++|||+|+|+|||||+|+..||||..+ +.++|+|+|+.|. ...||..|+++|++|+||
T Consensus 5 ~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~~~~~Hs~~a~~~L~~~~IG 84 (90)
T 1cxy_A 5 ATLPVFTLEQVAEHHSPDDCWMAIHGKVYDLTPYVPNHPGPAGMMLVWCGQESTEAWETKSYGEPHSSLAARLLQRYLIG 84 (90)
T ss_dssp -CCCBCCHHHHTTCEETTEEEEEETTEEEECTTTGGGCCSSTTTTGGGTTSBCHHHHHHTTTTCCCCHHHHHHHHHTEEE
T ss_pred ccCCCcCHHHHHHhcCCCCEEEEECCEEEECccchhhCcChHHHHHHHCCcchhHHHhhcccccCCCHHHHHHHHhCcee
Confidence 34588999999999999999999999999999999999999865 5899999999998 578999999999999999
Q ss_pred ecc
Q 036360 115 DLK 117 (118)
Q Consensus 115 ~l~ 117 (118)
+|+
T Consensus 85 ~l~ 87 (90)
T 1cxy_A 85 TLE 87 (90)
T ss_dssp EC-
T ss_pred EeC
Confidence 986
No 3
>1cyo_A Cytochrome B5; electron transport; HET: HEM; 1.50A {Bos taurus} SCOP: d.120.1.1 PDB: 1bfx_A* 1i87_A 1i8c_A 1iet_A 1ieu_A 1do9_A* 1aqa_A* 1aw3_A* 1axx_A* 1b5a_A* 1b5b_A* 1blv_A* 1mny_A* 2axx_A* 1ib7_A* 1jex_A* 1ehb_A* 1nx7_A* 1u9u_A* 1m20_A* ...
Probab=99.94 E-value=7e-28 Score=157.73 Aligned_cols=77 Identities=42% Similarity=0.802 Sum_probs=71.9
Q ss_pred cCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchhc-cccCCCccccccCCCCcHHHHHhhhhceeeecc
Q 036360 41 ASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAIL-AHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLK 117 (118)
Q Consensus 41 ~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~il-~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~ 117 (118)
..+.||++||++|++.++|||+|+|+|||||+|+..||||..++ .++|+|+|+.|...+|+..|+++|++|+||+|.
T Consensus 3 ~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~l~ 80 (93)
T 1cyo_A 3 AVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELH 80 (93)
T ss_dssp SCCEECHHHHTTCEETTEEEEEETTEEEECTTTTTTCTTCSHHHHHHTTSBCHHHHHHTTCCHHHHHHHTTTEEEEEC
T ss_pred CCCccCHHHHHhhCCCCCEEEEECCEEEECCCcchhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHhCeeEEec
Confidence 35789999999999999999999999999999999999999754 899999999998778999999999999999985
No 4
>1hko_A Cytochrome B5; electron transfer protein, heme, electron transport; HET: HEM; NMR {Bos taurus} SCOP: d.120.1.1 PDB: 2i96_A*
Probab=99.94 E-value=1.6e-27 Score=158.97 Aligned_cols=79 Identities=41% Similarity=0.768 Sum_probs=73.2
Q ss_pred ccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchh-ccccCCCccccccCCCCcHHHHHhhhhceeeeccC
Q 036360 40 KASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAI-LAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKQ 118 (118)
Q Consensus 40 ~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~i-l~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~~ 118 (118)
...+.||++||++|++.++|||+|+|+|||||+|+..||||..+ +.++|+|+|+.|...+|+..|+++|++|+||+|.+
T Consensus 6 ~~~~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l~~ 85 (104)
T 1hko_A 6 KAVKYYTLEEIQKHNNSKSTWLILHYKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTDARELSKTFIIGELHP 85 (104)
T ss_dssp CCCEEECHHHHHHCBSSSSBEEEETTEEEEHHHHSSSSSSCSHHHHTTCSEECHHHHTTTTCCHHHHHHHTTTEEEEECT
T ss_pred ccCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCcChHHHHHHhcCccchHHHHHcCCCHHHHHHHHcCeeEEECC
Confidence 45688999999999999999999999999999999999999975 48999999999987789999999999999999863
No 5
>2ibj_A Cytochrome B5, CYTB5; FLY cytochrome B5, X-RAY diffraction, heme, electron transport; HET: HEM; 1.55A {Musca domestica}
Probab=99.94 E-value=9e-28 Score=155.62 Aligned_cols=77 Identities=39% Similarity=0.791 Sum_probs=72.0
Q ss_pred cCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchhc-cccCCCccccccCCCCcHHHHHhhhhceeeecc
Q 036360 41 ASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAIL-AHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLK 117 (118)
Q Consensus 41 ~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~il-~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~ 117 (118)
..+.||++||++|++.++|||+|+|+|||||+|+..||||..++ .++|+|+|+.|....|+..|+++|++|+||+|.
T Consensus 5 ~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~i~~~aG~DaT~~f~~~~Hs~~a~~~L~~~~IG~l~ 82 (88)
T 2ibj_A 5 DVKYFTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSDAREMMKQYKVGELV 82 (88)
T ss_dssp CCCEECHHHHHTSEETTEEEEEETTEEEECGGGTTTCTTCSHHHHTTTTEECHHHHHHHTCCHHHHHHHGGGEEEEEC
T ss_pred cCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcCHHHHHHHhCCCcchHHHHHcCCCHHHHHHHHcCceEEeC
Confidence 56889999999999999999999999999999999999998754 899999999998668999999999999999986
No 6
>3lf5_A Cytochrome B5 reductase 4; NCB5OR, electron transfer, redox, heme, endoplasmic reticulu flavoprotein, iron, metal-binding, NAD, oxidoreductase; HET: HEM; 1.25A {Homo sapiens}
Probab=99.93 E-value=9.7e-28 Score=155.67 Aligned_cols=79 Identities=34% Similarity=0.611 Sum_probs=72.3
Q ss_pred ccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchh-ccccCCCccccccCCCCcHHHHHhhhhceeeeccC
Q 036360 40 KASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAI-LAHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKQ 118 (118)
Q Consensus 40 ~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~i-l~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~~ 118 (118)
..++.||++||++|+++++|||+|+|+|||||+|+..||||..+ +.++|+|+|+.|+..+|+..++++|++|+||+|++
T Consensus 3 ~~l~~~t~~Ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~~l~~~aG~DaT~~F~~~h~~~~~~~~L~~~~IG~l~~ 82 (88)
T 3lf5_A 3 GRLIEVTEEELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNYESMLKECLVGRMAI 82 (88)
T ss_dssp CSSEEECHHHHHHCEETTEEEEEETTEEEECGGGTTTCTTCHHHHHTTTTEECHHHHHHHHTTCCHHHHTGGGEEEEECC
T ss_pred CCCCEeCHHHHHhhCCCCCEEEEECCEEEECccchhhCcChhhhhhhcCCCcchHHHHHHCCcHHHHHHHHcCeeEEeCC
Confidence 46789999999999999999999999999999999999999975 48999999999987777778889999999999874
No 7
>1x3x_A Cytochrome B5; hemoprotein, porcine parasitic namatode, electron transport; HET: HEM; 1.80A {Ascaris suum}
Probab=99.93 E-value=5.7e-27 Score=150.07 Aligned_cols=76 Identities=42% Similarity=0.715 Sum_probs=69.6
Q ss_pred CCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchhccccCCCcccc--ccCCC--CcHHHHHhhhhceeeecc
Q 036360 42 SKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAILAHAGDDSTEG--FYGPQ--HATRVFDMIDDFYIGDLK 117 (118)
Q Consensus 42 ~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~il~~~G~D~T~~--f~~~~--Hs~~a~~~l~~~~IG~l~ 117 (118)
.+.||++||++|++++++||+|+|+|||||+|+..||||+.++.++|+|+|+. |.+.+ |+..|+++|++|+||+|+
T Consensus 3 ~~~~t~~ev~~h~~~~~~wv~i~g~VYDvT~f~~~HPGG~~i~~~aG~D~T~~~~F~~~h~~hs~~a~~~L~~~~IG~l~ 82 (82)
T 1x3x_A 3 DKKYTKEEVAKHNTQNDLWIIYDGEVHDMTSFYKEHPGGKVILNKAGQDATSVLKTLAPHVKAADVVMKKLKQTCIGKVK 82 (82)
T ss_dssp SCEECHHHHHTCEETTEEEEEETTEEEECGGGGGGCTTGGGGGGGTTSBCHHHHHHSHHHHHTHHHHHHHHHHHEEEEEC
T ss_pred CCccCHHHHHhhCCCCCEEEEECCEEEECCcchhhCcChhhhhhhCCCCCchhhhhhcccccchHHHHHHHHhCcceEeC
Confidence 36899999999999999999999999999999999999933458999999999 98776 899999999999999984
No 8
>1mj4_A Sulfite oxidase; cytochrome B5, heme, oxidoreductase; HET: HEM; 1.20A {Homo sapiens} SCOP: d.120.1.1
Probab=99.92 E-value=2.9e-26 Score=146.85 Aligned_cols=75 Identities=32% Similarity=0.739 Sum_probs=66.5
Q ss_pred cCCccCHHHHhhhcCCCC-eEEEEcCeeecccchhhhCCCcc-hhccccCCCccccccC---CCCcHHHHHhhhhceeee
Q 036360 41 ASKIYSKDEVTLHNKRDD-CWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYG---PQHATRVFDMIDDFYIGD 115 (118)
Q Consensus 41 ~~~~~t~~ev~~h~~~~~-~wvii~g~VYDvt~f~~~HPgG~-~il~~~G~D~T~~f~~---~~Hs~~a~~~l~~~~IG~ 115 (118)
..+.||++||++|+++++ |||+|+|+|||||+|+..||||. .|+.++|+| |+.|.+ .+||..|+++|++|+||+
T Consensus 3 ~~~~~t~~ev~~h~~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~il~~aG~D-t~~f~~~~~~~hs~~a~~~L~~~~IG~ 81 (82)
T 1mj4_A 3 STHIYTKEEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGP-LEPFWALYAVHNQSHVRELLAQYKIGE 81 (82)
T ss_dssp CCCBCCCC-CTTCEETTTEEEEEETTEEEECTTTGGGSTTCHHHHHTTTTSB-SHHHHTTCGGGCSHHHHHHHHTTEEEE
T ss_pred CCCccCHHHHHHhcCCCCCeEEEECCEEEEchHHHHhCCCHhHHHHHHcCCC-hHHHHhhccccCcHHHHHHHHhCccee
Confidence 347899999999999997 99999999999999999999995 567899999 677875 368999999999999998
Q ss_pred c
Q 036360 116 L 116 (118)
Q Consensus 116 l 116 (118)
|
T Consensus 82 l 82 (82)
T 1mj4_A 82 L 82 (82)
T ss_dssp C
T ss_pred C
Confidence 6
No 9
>2keo_A Probable E3 ubiquitin-protein ligase HERC2; protein of unknown function, HERC2 cytochrome domain, ligase binding, phosphoprotein; NMR {Homo sapiens}
Probab=99.92 E-value=5.7e-27 Score=158.09 Aligned_cols=79 Identities=19% Similarity=0.407 Sum_probs=72.6
Q ss_pred ccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchhc-cccCCCccccccCCCCcHHHHHhhhhceeeeccC
Q 036360 40 KASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAIL-AHAGDDSTEGFYGPQHATRVFDMIDDFYIGDLKQ 118 (118)
Q Consensus 40 ~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~il-~~~G~D~T~~f~~~~Hs~~a~~~l~~~~IG~l~~ 118 (118)
+..+.||++||++|+++++|||+|+|+|||||+|+..||||..++ .++|+|+|+.|....||..|+++|++|+||.|.+
T Consensus 21 ~~~~~~t~~Ev~~h~~~~d~wvvi~G~VYDVT~fl~~HPGG~~~l~~~aGkDaT~~F~~~~Hs~~a~~~L~~~~IG~l~~ 100 (112)
T 2keo_A 21 EKVTLVRIADLENHNNDGGFWTVIDGKVYDIKDFQTQSLTENSILAQFAGEDPVVALEAALQFEDTRESMHAFCVGQYLE 100 (112)
T ss_dssp CCCCEECHHHHHHHHHHTCCEEEETTEEEEHHHHHHHHTSTTSTTGGGTTSCHHHHHHHHHHSTTGGGTHHHHEEEEECC
T ss_pred CCCCccCHHHHHHhcCCCCEEEEECCEEEECCcchhhCCCchhhhhhhCCccchHHHhHcCCCHHHHHHHHhCceEeeCC
Confidence 356899999999999999999999999999999999999999754 8999999999986579999999999999999863
No 10
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=99.81 E-value=7.7e-21 Score=154.00 Aligned_cols=76 Identities=32% Similarity=0.680 Sum_probs=69.5
Q ss_pred cCCccCHHHHhhhcCCCC-eEEEEcCeeecccchhhhCCCcc-hhccccCCCccccccC---CCCcHHHHHhhhhceeee
Q 036360 41 ASKIYSKDEVTLHNKRDD-CWIIIKNKVYDVTSYVEEHPGGD-AILAHAGDDSTEGFYG---PQHATRVFDMIDDFYIGD 115 (118)
Q Consensus 41 ~~~~~t~~ev~~h~~~~~-~wvii~g~VYDvt~f~~~HPgG~-~il~~~G~D~T~~f~~---~~Hs~~a~~~l~~~~IG~ 115 (118)
..+.||++||++||+.++ |||+|+|+|||||+|+..||||. .|+.++|+| |+.|++ .+||..|+++|++|+||.
T Consensus 3 ~~~~~t~~Ev~~H~~~~d~~Wvii~g~VYDvT~fl~~HPGG~~~il~~aG~D-T~~f~~~~~~~Hs~~a~~~L~~~~IG~ 81 (466)
T 1sox_A 3 SYPEYTREEVGRHRSPEERVWVTHGTDVFDVTDFVELHPGGPDKILLAAGGA-LEPFWALYAVHGEPHVLELLQQYKVGE 81 (466)
T ss_dssp CCCEECHHHHTTCEETTTEEEEEETTEEEECTTTTTTSTTCHHHHGGGTTSB-SHHHHHHSGGGGSHHHHHHHHTTEEEE
T ss_pred CCCeeCHHHHHHhcCCCCceEEEECCEEEechHhHhhCcCCcccchhhcCCc-cccccccccccCCHHHHHHHHhCceEE
Confidence 357899999999999998 99999999999999999999996 567899999 999974 479999999999999999
Q ss_pred cc
Q 036360 116 LK 117 (118)
Q Consensus 116 l~ 117 (118)
|+
T Consensus 82 l~ 83 (466)
T 1sox_A 82 LS 83 (466)
T ss_dssp EC
T ss_pred ec
Confidence 85
No 11
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=99.79 E-value=2.7e-20 Score=152.18 Aligned_cols=77 Identities=39% Similarity=0.671 Sum_probs=68.4
Q ss_pred ccCCccCHHHHhhhcCCCCeEEEEcCeeecccchhhhCCCcchh-ccccCCCccccccCCCCcHHHH-Hhh-hhceeeec
Q 036360 40 KASKIYSKDEVTLHNKRDDCWIIIKNKVYDVTSYVEEHPGGDAI-LAHAGDDSTEGFYGPQHATRVF-DMI-DDFYIGDL 116 (118)
Q Consensus 40 ~~~~~~t~~ev~~h~~~~~~wvii~g~VYDvt~f~~~HPgG~~i-l~~~G~D~T~~f~~~~Hs~~a~-~~l-~~~~IG~l 116 (118)
...+.||++||++||+.++|||+|+|+|||||+|+..||||..+ +.++|+|+|+.|... |+..+. ++| ++|+||+|
T Consensus 6 ~~~~~~t~~ev~~h~~~~~~wv~i~g~VYDvt~f~~~HPGG~~~i~~~aG~DaT~~f~~~-H~~~~~~~~l~~~~~iG~l 84 (511)
T 1kbi_A 6 MNKQKISPAEVAKHNKPDDCWVVINGYVYDLTRFLPNHPGGQDVIKFNAGKDVTAIFEPL-HAPNVIDKYIAPEKKLGPL 84 (511)
T ss_dssp SCSCCBCTTHHHHCEETTEEEEEETTEEEECTTTGGGCTTCHHHHHTTTTSBCHHHHGGG-SCTTHHHHHSCGGGEEEEB
T ss_pred CCCCccCHHHHHHhCCCCCEEEEECCEEEECCcchhhCcChHHHHHHHcCcchhhhhhhc-CCHHHHHHhhccccEEEEe
Confidence 44688999999999999999999999999999999999999975 489999999999865 888776 455 78999998
Q ss_pred c
Q 036360 117 K 117 (118)
Q Consensus 117 ~ 117 (118)
+
T Consensus 85 ~ 85 (511)
T 1kbi_A 85 Q 85 (511)
T ss_dssp C
T ss_pred c
Confidence 6
No 12
>1j03_A Putative steroid binding protein; alpha and beta, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: d.120.1.2 PDB: 1t0g_A
Probab=99.69 E-value=6.5e-18 Score=111.99 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=52.2
Q ss_pred CccCHHHHhhhcCCC---CeEEEEcCeeecccchhh-hCCCcchhccccCCCccccccCCCCcH
Q 036360 43 KIYSKDEVTLHNKRD---DCWIIIKNKVYDVTSYVE-EHPGGDAILAHAGDDSTEGFYGPQHAT 102 (118)
Q Consensus 43 ~~~t~~ev~~h~~~~---~~wvii~g~VYDvt~f~~-~HPgG~~il~~~G~D~T~~f~~~~Hs~ 102 (118)
+.||++||++||+.+ +|||+|+|+|||||+|.. .||||. +..++|+|+|+.|....|+.
T Consensus 3 ~~~T~~El~~~ng~~~~~~~~vaI~G~VYDVT~~~~~~hPGG~-~~~~AG~DaT~~f~~~~~~~ 65 (102)
T 1j03_A 3 MEFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGD-YSMFAGKDASRALGKMSKNE 65 (102)
T ss_dssp CCCCHHHHTTCBSCSSSCCBEEEETTEEEECGGGHHHHSSSST-TTTTTTSBCHHHHHHTCCCS
T ss_pred cccCHHHHHHhcCCCCCCCEEEEECCEEEECCCCccccCCCCc-ccccccchHHHHHHHcCCCh
Confidence 579999999999976 799999999999999977 799998 45899999999998666763
Done!