Query 036361
Match_columns 485
No_of_seqs 175 out of 2220
Neff 10.7
Searched_HMMs 46136
Date Fri Mar 29 11:54:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036361.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/036361hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1176 Acyl-CoA synthetase [L 100.0 1.8E-74 3.8E-79 558.3 43.3 457 2-485 4-472 (537)
2 KOG1177 Long chain fatty acid 100.0 4.5E-73 9.9E-78 511.0 36.6 452 10-485 46-525 (596)
3 COG0318 CaiC Acyl-CoA syntheta 100.0 4.3E-70 9.4E-75 547.1 46.4 448 9-485 6-465 (534)
4 COG1021 EntE Peptide arylation 100.0 1.8E-69 4E-74 476.8 26.0 444 11-485 25-478 (542)
5 COG0365 Acs Acyl-coenzyme A sy 100.0 6.7E-68 1.4E-72 509.6 38.2 430 19-485 14-460 (528)
6 PLN02614 long-chain acyl-CoA s 100.0 1.1E-67 2.4E-72 542.4 40.3 446 14-479 45-555 (666)
7 PTZ00342 acyl-CoA synthetase; 100.0 2.4E-67 5.2E-72 538.2 41.0 449 11-478 58-628 (746)
8 PLN02736 long-chain acyl-CoA s 100.0 6.2E-67 1.3E-71 538.5 40.9 447 10-477 40-544 (651)
9 PLN02860 o-succinylbenzoate-Co 100.0 3.6E-66 7.8E-71 525.4 44.8 458 9-484 2-477 (563)
10 PLN02861 long-chain-fatty-acid 100.0 2.7E-66 5.9E-71 532.6 39.6 447 12-479 41-552 (660)
11 COG1022 FAA1 Long-chain acyl-C 100.0 4.1E-66 8.9E-71 503.8 38.3 441 9-481 11-510 (613)
12 PLN03102 acyl-activating enzym 100.0 3.7E-65 8E-70 518.7 46.6 475 1-484 1-483 (579)
13 PRK07788 acyl-CoA synthetase; 100.0 2.7E-65 5.8E-70 518.4 44.7 438 14-485 49-491 (549)
14 PRK07529 AMP-binding domain pr 100.0 3.3E-64 7.2E-69 516.1 46.8 461 5-484 16-508 (632)
15 PTZ00237 acetyl-CoA synthetase 100.0 1.5E-64 3.2E-69 518.7 43.7 454 16-485 61-556 (647)
16 TIGR02316 propion_prpE propion 100.0 4E-64 8.7E-69 515.9 44.4 449 17-484 55-535 (628)
17 PRK06334 long chain fatty acid 100.0 2.7E-64 5.9E-69 507.9 42.0 443 11-480 16-475 (539)
18 PLN02387 long-chain-fatty-acid 100.0 7.8E-65 1.7E-69 523.9 38.7 449 13-478 57-593 (696)
19 PLN02654 acetate-CoA ligase 100.0 1.5E-63 3.2E-68 512.9 43.1 451 17-484 91-576 (666)
20 PRK13382 acyl-CoA synthetase; 100.0 6.7E-63 1.5E-67 498.6 45.5 433 13-484 42-479 (537)
21 PRK13295 cyclohexanecarboxylat 100.0 1.2E-62 2.7E-67 498.4 47.0 442 9-484 19-482 (547)
22 PLN02246 4-coumarate--CoA liga 100.0 1.2E-62 2.7E-67 497.6 46.5 445 11-484 20-475 (537)
23 PRK08314 long-chain-fatty-acid 100.0 2.5E-62 5.3E-67 497.1 47.7 459 6-484 2-479 (546)
24 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 5.1E-63 1.1E-67 508.5 43.1 446 16-484 59-538 (625)
25 PRK07656 long-chain-fatty-acid 100.0 4.3E-62 9.4E-67 492.1 46.5 449 11-484 2-455 (513)
26 PRK00174 acetyl-CoA synthetase 100.0 2.1E-62 4.7E-67 504.7 43.9 444 17-484 70-546 (637)
27 PRK06839 acyl-CoA synthetase; 100.0 2.7E-62 5.9E-67 491.4 43.5 428 15-484 3-434 (496)
28 PLN02479 acetate-CoA ligase 100.0 4.9E-62 1.1E-66 495.6 45.7 479 2-484 8-493 (567)
29 PLN02574 4-coumarate--CoA liga 100.0 9.6E-63 2.1E-67 500.0 40.4 440 15-485 41-494 (560)
30 PRK03640 O-succinylbenzoic aci 100.0 4.2E-62 9.1E-67 488.2 43.5 421 14-484 2-423 (483)
31 PRK06155 crotonobetaine/carnit 100.0 1.8E-61 3.8E-66 488.5 47.6 442 9-484 16-463 (542)
32 PRK09274 peptide synthase; Pro 100.0 2.5E-62 5.4E-67 497.3 41.3 444 11-481 3-480 (552)
33 PRK08162 acyl-CoA synthetase; 100.0 2.2E-61 4.7E-66 489.9 48.0 471 3-484 7-479 (545)
34 PLN02430 long-chain-fatty-acid 100.0 2.2E-62 4.7E-67 502.8 40.1 446 12-478 40-551 (660)
35 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 1.7E-61 3.7E-66 488.1 45.2 441 11-484 20-471 (527)
36 PTZ00216 acyl-CoA synthetase; 100.0 2.3E-62 5E-67 506.9 39.7 440 12-478 67-596 (700)
37 PRK07638 acyl-CoA synthetase; 100.0 1.1E-61 2.4E-66 485.2 43.3 423 14-485 1-425 (487)
38 KOG1256 Long-chain acyl-CoA sy 100.0 1.4E-62 3E-67 471.4 34.6 452 10-480 71-587 (691)
39 PRK05677 long-chain-fatty-acid 100.0 4.2E-61 9.2E-66 488.5 47.3 453 13-484 23-496 (562)
40 PRK04319 acetyl-CoA synthetase 100.0 1.1E-61 2.4E-66 493.6 43.1 437 16-484 45-495 (570)
41 PRK10524 prpE propionyl-CoA sy 100.0 1.4E-61 3E-66 498.3 43.3 449 17-484 56-536 (629)
42 PRK06187 long-chain-fatty-acid 100.0 5.8E-61 1.3E-65 485.0 46.2 454 10-484 2-458 (521)
43 PRK06087 short chain acyl-CoA 100.0 4.9E-61 1.1E-65 487.2 45.6 446 11-485 20-474 (547)
44 PRK05857 acyl-CoA synthetase; 100.0 1.4E-61 3.1E-66 489.3 41.5 446 9-484 9-465 (540)
45 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 7.6E-61 1.7E-65 484.6 46.7 438 13-484 21-480 (538)
46 PRK07769 long-chain-fatty-acid 100.0 2E-61 4.2E-66 497.1 42.2 438 13-481 20-526 (631)
47 PRK05605 long-chain-fatty-acid 100.0 9.9E-61 2.1E-65 487.5 46.4 454 13-484 31-508 (573)
48 PRK06164 acyl-CoA synthetase; 100.0 8.3E-61 1.8E-65 485.1 44.7 452 8-479 4-464 (540)
49 PRK08316 acyl-CoA synthetase; 100.0 9.5E-61 2.1E-65 483.5 44.9 448 9-484 6-458 (523)
50 PRK07470 acyl-CoA synthetase; 100.0 9.5E-61 2.1E-65 483.3 44.8 448 10-484 3-457 (528)
51 PRK07786 long-chain-fatty-acid 100.0 1.3E-60 2.8E-65 483.1 44.8 443 11-484 14-462 (542)
52 PRK08180 feruloyl-CoA synthase 100.0 2.9E-61 6.4E-66 493.5 40.5 438 8-483 33-509 (614)
53 PRK07008 long-chain-fatty-acid 100.0 2.2E-60 4.8E-65 480.8 46.1 458 9-484 5-472 (539)
54 TIGR03098 ligase_PEP_1 acyl-Co 100.0 2.4E-60 5.3E-65 479.5 45.9 444 15-485 1-458 (515)
55 PRK08315 AMP-binding domain pr 100.0 2.1E-60 4.6E-65 484.3 45.7 453 8-484 10-490 (559)
56 PLN02330 4-coumarate--CoA liga 100.0 7.9E-61 1.7E-65 485.1 42.2 442 12-484 26-480 (546)
57 PRK05852 acyl-CoA synthetase; 100.0 1.1E-60 2.5E-65 482.9 43.2 448 12-484 14-471 (534)
58 PRK06060 acyl-CoA synthetase; 100.0 6.2E-61 1.3E-65 498.8 41.3 418 14-484 4-428 (705)
59 PRK06018 putative acyl-CoA syn 100.0 9.8E-60 2.1E-64 476.7 47.3 460 9-484 5-473 (542)
60 PRK08008 caiC putative crotono 100.0 6.7E-60 1.4E-64 476.1 45.6 443 14-484 7-461 (517)
61 PRK06145 acyl-CoA synthetase; 100.0 5.3E-60 1.1E-64 474.6 44.1 430 14-484 2-436 (497)
62 PRK07514 malonyl-CoA synthase; 100.0 1.1E-59 2.4E-64 473.2 46.5 434 13-484 2-440 (504)
63 TIGR03443 alpha_am_amid L-amin 100.0 1.7E-60 3.7E-65 530.4 44.6 457 13-483 235-740 (1389)
64 PRK07867 acyl-CoA synthetase; 100.0 8.6E-60 1.9E-64 474.5 44.6 425 12-485 3-445 (529)
65 PRK12492 long-chain-fatty-acid 100.0 1.5E-59 3.2E-64 477.3 46.1 454 13-484 23-504 (562)
66 PRK12582 acyl-CoA synthetase; 100.0 1.8E-60 3.8E-65 488.7 39.7 437 9-484 44-522 (624)
67 PRK12583 acyl-CoA synthetase; 100.0 1.9E-59 4.1E-64 477.4 46.8 449 11-484 15-491 (558)
68 PRK05620 long-chain-fatty-acid 100.0 9.3E-60 2E-64 480.1 44.4 463 9-484 5-493 (576)
69 PRK03584 acetoacetyl-CoA synth 100.0 5.2E-60 1.1E-64 488.2 42.9 434 26-484 96-561 (655)
70 PRK12467 peptide synthase; Pro 100.0 7E-61 1.5E-65 566.1 40.0 426 13-480 3094-3530(3956)
71 PRK10946 entE enterobactin syn 100.0 1.1E-59 2.3E-64 475.5 42.9 437 12-484 23-472 (536)
72 PRK06188 acyl-CoA synthetase; 100.0 1.6E-59 3.4E-64 473.9 43.2 446 9-484 7-456 (524)
73 PRK08633 2-acyl-glycerophospho 100.0 4.4E-60 9.6E-65 520.5 41.3 458 11-485 612-1085(1146)
74 PRK07059 Long-chain-fatty-acid 100.0 4.5E-59 9.7E-64 473.7 45.5 457 10-484 19-498 (557)
75 PRK09088 acyl-CoA synthetase; 100.0 1.7E-59 3.6E-64 469.8 41.5 416 21-484 2-424 (488)
76 TIGR01217 ac_ac_CoA_syn acetoa 100.0 1.2E-59 2.5E-64 483.3 41.4 435 26-484 96-562 (652)
77 PRK13383 acyl-CoA synthetase; 100.0 2.2E-59 4.8E-64 471.5 42.6 421 12-485 33-460 (516)
78 PRK08043 bifunctional acyl-[ac 100.0 3.8E-60 8.2E-65 493.1 38.2 440 12-485 202-655 (718)
79 PRK13388 acyl-CoA synthetase; 100.0 4.6E-59 1E-63 470.7 44.8 425 13-484 2-443 (540)
80 PRK12476 putative fatty-acid-- 100.0 7.4E-60 1.6E-64 483.3 39.5 440 12-484 32-540 (612)
81 PRK05851 long-chain-fatty-acid 100.0 4.2E-60 9.1E-65 476.9 37.0 424 16-484 4-458 (525)
82 PRK08751 putative long-chain f 100.0 4.3E-59 9.4E-64 474.4 44.7 454 13-484 24-500 (560)
83 TIGR03205 pimA dicarboxylate-- 100.0 1.5E-58 3.2E-63 468.3 46.6 453 12-484 19-484 (541)
84 PRK08279 long-chain-acyl-CoA s 100.0 1.1E-58 2.3E-63 474.6 45.0 440 11-482 34-500 (600)
85 PLN03052 acetate--CoA ligase; 100.0 8.5E-59 1.8E-63 478.6 44.1 446 14-483 174-652 (728)
86 PRK06178 acyl-CoA synthetase; 100.0 6.3E-58 1.4E-62 466.3 47.8 461 12-484 31-505 (567)
87 PRK10252 entF enterobactin syn 100.0 4.5E-59 9.8E-64 517.4 41.8 423 13-477 457-893 (1296)
88 PRK06710 long-chain-fatty-acid 100.0 2.8E-58 6E-63 468.5 43.5 452 14-484 24-494 (563)
89 PRK12467 peptide synthase; Pro 100.0 7.4E-59 1.6E-63 549.0 42.9 428 12-480 510-949 (3956)
90 TIGR02262 benz_CoA_lig benzoat 100.0 1.4E-57 3.1E-62 457.9 45.8 433 17-483 7-446 (508)
91 PF00501 AMP-binding: AMP-bind 100.0 1.6E-59 3.4E-64 460.8 30.1 397 20-450 1-417 (417)
92 PRK12316 peptide synthase; Pro 100.0 1.2E-58 2.6E-63 555.2 42.8 423 13-478 510-943 (5163)
93 PRK12316 peptide synthase; Pro 100.0 1.2E-58 2.7E-63 555.1 42.4 427 13-480 2002-2440(5163)
94 TIGR01734 D-ala-DACP-lig D-ala 100.0 1.7E-57 3.6E-62 457.3 42.3 420 15-478 1-430 (502)
95 PRK13390 acyl-CoA synthetase; 100.0 1.7E-57 3.7E-62 456.5 42.0 425 21-485 4-443 (501)
96 PRK08974 long-chain-fatty-acid 100.0 9.5E-57 2.1E-61 456.9 46.0 453 13-484 22-495 (560)
97 PRK05691 peptide synthase; Val 100.0 6.8E-58 1.5E-62 545.4 43.7 431 12-479 3718-4160(4334)
98 PRK07787 acyl-CoA synthetase; 100.0 3.7E-57 8.1E-62 450.1 41.5 401 24-484 10-414 (471)
99 KOG1180 Acyl-CoA synthetase [L 100.0 2.9E-58 6.3E-63 422.2 28.3 458 8-480 35-575 (678)
100 PRK13391 acyl-CoA synthetase; 100.0 1.4E-56 3.1E-61 450.8 43.3 430 20-484 3-445 (511)
101 PRK06814 acylglycerophosphoeth 100.0 1.5E-56 3.1E-61 490.7 44.4 439 12-485 629-1074(1140)
102 PRK05691 peptide synthase; Val 100.0 3E-57 6.4E-62 539.9 42.0 425 11-480 1128-1564(4334)
103 PRK04813 D-alanine--poly(phosp 100.0 3E-56 6.6E-61 448.5 41.8 427 14-484 2-438 (503)
104 PRK05850 acyl-CoA synthetase; 100.0 1.1E-56 2.4E-61 458.2 38.9 437 14-484 1-497 (578)
105 PRK07798 acyl-CoA synthetase; 100.0 1.6E-55 3.5E-60 446.5 46.5 441 14-484 3-471 (533)
106 PRK09029 O-succinylbenzoic aci 100.0 4.7E-56 1E-60 440.9 40.2 385 21-484 10-394 (458)
107 PRK12406 long-chain-fatty-acid 100.0 1.2E-55 2.5E-60 444.1 42.7 429 31-484 3-442 (509)
108 PRK07445 O-succinylbenzoic aci 100.0 2E-56 4.3E-61 439.9 34.6 369 39-485 19-388 (452)
109 PRK08276 long-chain-fatty-acid 100.0 8.5E-56 1.9E-60 444.5 40.0 419 31-484 3-432 (502)
110 PRK09192 acyl-CoA synthetase; 100.0 1.9E-55 4.1E-60 448.5 38.9 433 14-481 21-500 (579)
111 PRK07868 acyl-CoA synthetase; 100.0 6.7E-55 1.5E-59 464.0 44.6 432 10-481 443-896 (994)
112 TIGR01733 AA-adenyl-dom amino 100.0 3.7E-55 8.1E-60 428.7 35.9 394 41-474 1-408 (408)
113 KOG1179 Very long-chain acyl-C 100.0 2.1E-54 4.6E-59 398.5 36.1 445 11-480 74-547 (649)
114 TIGR01923 menE O-succinylbenzo 100.0 2E-54 4.4E-59 427.1 36.6 383 41-484 1-383 (436)
115 PLN03051 acyl-activating enzym 100.0 1.3E-54 2.8E-59 434.1 35.1 388 71-484 1-421 (499)
116 KOG1175 Acyl-CoA synthetase [L 100.0 4.3E-54 9.3E-59 414.4 34.1 438 20-485 70-539 (626)
117 PRK07768 long-chain-fatty-acid 100.0 2.4E-53 5.3E-58 430.8 39.4 426 15-478 3-471 (545)
118 PRK08308 acyl-CoA synthetase; 100.0 6.6E-52 1.4E-56 405.4 39.7 353 32-484 1-354 (414)
119 PTZ00297 pantothenate kinase; 100.0 2.6E-44 5.6E-49 382.7 39.2 414 13-481 426-897 (1452)
120 COG1020 EntF Non-ribosomal pep 100.0 1.4E-41 3E-46 351.2 38.3 407 13-467 226-642 (642)
121 PRK07824 O-succinylbenzoic aci 100.0 1.5E-39 3.2E-44 312.0 28.7 259 185-484 32-296 (358)
122 KOG3628 Predicted AMP-binding 100.0 1.5E-31 3.3E-36 262.9 32.5 448 14-479 770-1288(1363)
123 TIGR02372 4_coum_CoA_lig 4-cou 100.0 2.1E-32 4.5E-37 260.8 22.9 232 188-476 95-330 (386)
124 TIGR02155 PA_CoA_ligase phenyl 100.0 2.1E-32 4.5E-37 267.7 22.1 259 186-476 73-350 (422)
125 TIGR03089 conserved hypothetic 100.0 2.4E-27 5.1E-32 209.4 22.1 218 20-278 2-227 (227)
126 TIGR03335 F390_ftsA coenzyme F 100.0 2.8E-27 6E-32 231.5 22.1 253 186-470 84-359 (445)
127 KOG1178 Non-ribosomal peptide 99.9 1.3E-25 2.8E-30 228.3 18.4 440 14-484 36-517 (1032)
128 COG1541 PaaK Coenzyme F390 syn 99.9 2.2E-23 4.7E-28 193.5 22.7 252 188-470 90-360 (438)
129 KOG3628 Predicted AMP-binding 99.8 5.8E-20 1.3E-24 182.1 17.1 434 13-476 93-636 (1363)
130 TIGR02304 aden_form_hyp probab 99.7 3.4E-15 7.4E-20 143.0 19.9 242 189-477 100-366 (430)
131 PRK09188 serine/threonine prot 99.3 1.9E-12 4.2E-17 121.2 7.4 61 419-485 207-271 (365)
132 PF04443 LuxE: Acyl-protein sy 99.0 7.9E-08 1.7E-12 90.4 19.6 232 187-456 88-360 (365)
133 PF03321 GH3: GH3 auxin-respon 98.2 3.5E-05 7.7E-10 77.0 14.7 144 299-477 266-434 (528)
134 PLN02247 indole-3-acetic acid- 97.7 0.0082 1.8E-07 60.1 21.4 44 422-465 416-463 (606)
135 PLN02249 indole-3-acetic acid- 97.5 0.0045 9.8E-08 62.4 16.8 43 423-465 410-456 (597)
136 PLN02620 indole-3-acetic acid- 97.4 0.013 2.9E-07 58.6 17.7 44 422-465 422-469 (612)
137 COG1541 PaaK Coenzyme F390 syn 96.4 0.03 6.4E-07 53.6 10.4 93 39-132 109-203 (438)
138 PF13193 AMP-binding_C: AMP-bi 96.0 0.0035 7.6E-08 44.2 1.5 27 458-484 1-27 (73)
139 TIGR02155 PA_CoA_ligase phenyl 91.5 2 4.4E-05 42.1 11.1 89 39-128 94-184 (422)
140 TIGR03335 F390_ftsA coenzyme F 91.3 2.8 6E-05 41.5 11.7 84 38-124 104-189 (445)
141 PRK07656 long-chain-fatty-acid 82.6 15 0.00033 36.9 11.5 86 38-127 184-271 (513)
142 TIGR03590 PseG pseudaminic aci 80.5 23 0.0005 32.5 10.8 91 47-148 18-113 (279)
143 TIGR03089 conserved hypothetic 80.4 12 0.00026 33.1 8.6 54 57-112 171-226 (227)
144 PRK06187 long-chain-fatty-acid 79.9 15 0.00033 36.9 10.5 87 38-128 185-272 (521)
145 PF00501 AMP-binding: AMP-bind 79.3 18 0.0004 35.2 10.5 88 186-282 8-99 (417)
146 PLN02736 long-chain acyl-CoA s 78.8 43 0.00093 35.1 13.6 100 206-308 77-180 (651)
147 PF14535 AMP-binding_C_2: AMP- 76.2 2.9 6.3E-05 31.1 2.9 25 451-475 1-25 (96)
148 TIGR01733 AA-adenyl-dom amino 75.5 45 0.00097 32.2 12.0 99 28-129 119-229 (408)
149 PRK06334 long chain fatty acid 75.3 52 0.0011 33.5 12.7 98 27-127 181-289 (539)
150 PRK08315 AMP-binding domain pr 74.7 27 0.00059 35.6 10.6 84 38-124 217-302 (559)
151 KOG1177 Long chain fatty acid 71.8 36 0.00077 33.4 9.4 106 204-310 74-199 (596)
152 PRK12583 acyl-CoA synthetase; 71.7 37 0.0008 34.6 10.8 83 38-123 219-303 (558)
153 COG0399 WecE Predicted pyridox 71.4 18 0.00039 34.5 7.6 89 49-148 59-157 (374)
154 TIGR03098 ligase_PEP_1 acyl-Co 71.2 36 0.00078 34.2 10.5 86 38-127 179-265 (515)
155 PLN02565 cysteine synthase 69.5 51 0.0011 31.0 10.2 89 30-120 31-122 (322)
156 PRK09274 peptide synthase; Pro 69.1 62 0.0013 33.0 11.7 97 187-284 20-121 (552)
157 KOG1176 Acyl-CoA synthetase [L 68.2 47 0.001 33.7 10.1 86 205-291 43-134 (537)
158 PLN03052 acetate--CoA ligase; 67.8 66 0.0014 34.3 11.8 98 186-285 188-289 (728)
159 PRK02261 methylaspartate mutas 67.8 56 0.0012 26.2 8.7 100 231-333 6-119 (137)
160 cd01445 TST_Repeats Thiosulfat 67.4 14 0.00031 29.6 5.3 41 50-90 81-124 (138)
161 PRK03640 O-succinylbenzoic aci 66.9 79 0.0017 31.4 11.8 86 38-127 159-245 (483)
162 PRK07529 AMP-binding domain pr 66.8 61 0.0013 33.8 11.2 96 186-283 38-136 (632)
163 PLN03102 acyl-activating enzym 65.7 66 0.0014 33.1 11.1 81 207-288 39-123 (579)
164 PRK04319 acetyl-CoA synthetase 64.6 57 0.0012 33.5 10.4 87 38-127 223-311 (570)
165 PTZ00342 acyl-CoA synthetase; 64.2 1.1E+02 0.0024 32.8 12.4 117 186-309 74-208 (746)
166 TIGR01923 menE O-succinylbenzo 63.7 34 0.00073 33.5 8.3 84 38-127 129-213 (436)
167 PLN02654 acetate-CoA ligase 63.5 84 0.0018 33.1 11.5 95 187-285 103-201 (666)
168 PLN02387 long-chain-fatty-acid 63.4 80 0.0017 33.5 11.4 102 205-309 104-209 (696)
169 TIGR02379 ECA_wecE TDP-4-keto- 63.1 29 0.00064 33.4 7.5 59 56-118 63-126 (376)
170 TIGR02188 Ac_CoA_lig_AcsA acet 63.1 82 0.0018 32.8 11.4 96 186-285 70-169 (625)
171 PRK06839 acyl-CoA synthetase; 62.9 98 0.0021 30.9 11.6 85 205-290 25-114 (496)
172 PRK08316 acyl-CoA synthetase; 62.8 75 0.0016 32.0 10.8 84 206-290 35-122 (523)
173 PRK05857 acyl-CoA synthetase; 61.7 65 0.0014 32.8 10.1 80 206-286 40-123 (540)
174 PLN02246 4-coumarate--CoA liga 61.7 90 0.002 31.7 11.2 96 186-289 36-135 (537)
175 PF01041 DegT_DnrJ_EryC1: DegT 61.4 21 0.00046 34.2 6.2 85 21-119 32-121 (363)
176 PLN02614 long-chain acyl-CoA s 61.2 1.4E+02 0.003 31.4 12.7 85 206-291 78-166 (666)
177 PRK00174 acetyl-CoA synthetase 60.9 96 0.0021 32.4 11.4 96 186-285 80-179 (637)
178 PLN03051 acyl-activating enzym 60.8 50 0.0011 33.2 9.1 86 38-126 137-223 (499)
179 PLN02556 cysteine synthase/L-3 60.2 54 0.0012 31.5 8.6 68 52-119 98-165 (368)
180 PRK11761 cysM cysteine synthas 60.2 58 0.0013 30.1 8.6 87 30-119 28-117 (296)
181 PRK13295 cyclohexanecarboxylat 60.1 93 0.002 31.7 11.0 95 187-285 38-136 (547)
182 PRK06188 acyl-CoA synthetase; 59.8 91 0.002 31.5 10.8 86 38-127 186-271 (524)
183 PRK07788 acyl-CoA synthetase; 59.7 66 0.0014 32.8 9.8 83 207-290 74-160 (549)
184 PRK07008 long-chain-fatty-acid 58.7 1.1E+02 0.0025 31.0 11.3 88 38-127 194-283 (539)
185 PRK11706 TDP-4-oxo-6-deoxy-D-g 58.1 40 0.00087 32.5 7.5 58 57-118 64-126 (375)
186 KOG0023 Alcohol dehydrogenase, 57.8 67 0.0015 29.8 8.0 75 55-132 173-247 (360)
187 PRK03584 acetoacetyl-CoA synth 57.8 1.2E+02 0.0026 31.8 11.5 94 187-285 98-195 (655)
188 PRK13388 acyl-CoA synthetase; 57.7 1.1E+02 0.0024 31.1 11.1 83 207-290 26-113 (540)
189 PRK08008 caiC putative crotono 57.4 1.2E+02 0.0026 30.5 11.2 99 186-289 20-122 (517)
190 PRK06155 crotonobetaine/carnit 57.4 79 0.0017 32.2 9.9 84 207-291 46-133 (542)
191 PLN02430 long-chain-fatty-acid 57.4 2.5E+02 0.0055 29.5 13.9 102 187-291 56-163 (660)
192 TIGR01217 ac_ac_CoA_syn acetoa 57.2 1.2E+02 0.0027 31.7 11.5 92 188-284 99-194 (652)
193 PLN03013 cysteine synthase 56.5 73 0.0016 31.2 8.7 64 57-120 166-230 (429)
194 TIGR02262 benz_CoA_lig benzoat 56.5 1.6E+02 0.0034 29.6 11.8 95 28-124 160-265 (508)
195 PRK08308 acyl-CoA synthetase; 56.5 1.9E+02 0.004 28.1 12.0 86 38-127 119-206 (414)
196 PRK07798 acyl-CoA synthetase; 56.3 1.2E+02 0.0027 30.5 11.2 84 206-290 27-114 (533)
197 PLN02330 4-coumarate--CoA liga 55.4 1E+02 0.0023 31.3 10.4 83 206-289 54-140 (546)
198 COG0031 CysK Cysteine synthase 55.3 88 0.0019 28.9 8.5 60 59-119 56-116 (300)
199 PRK08279 long-chain-acyl-CoA s 55.2 1.3E+02 0.0028 31.1 11.2 95 186-290 50-148 (600)
200 TIGR00936 ahcY adenosylhomocys 55.1 1.2E+02 0.0027 29.5 10.0 62 62-123 30-93 (406)
201 COG4009 Uncharacterized protei 55.1 45 0.00097 23.4 5.0 66 38-114 8-76 (88)
202 PTZ00237 acetyl-CoA synthetase 54.9 1.4E+02 0.0031 31.2 11.5 94 187-284 75-172 (647)
203 TIGR01139 cysK cysteine syntha 54.7 88 0.0019 29.0 8.9 89 29-120 21-112 (298)
204 PRK05850 acyl-CoA synthetase; 54.3 1.7E+02 0.0036 30.1 11.8 101 186-290 14-123 (578)
205 PRK07638 acyl-CoA synthetase; 54.2 1.3E+02 0.0027 30.1 10.7 87 38-128 161-248 (487)
206 PRK07514 malonyl-CoA synthase; 54.2 1.5E+02 0.0032 29.7 11.2 84 206-290 27-114 (504)
207 PRK05620 long-chain-fatty-acid 53.9 2.5E+02 0.0054 28.8 13.0 88 38-126 199-287 (576)
208 TIGR02275 DHB_AMP_lig 2,3-dihy 53.9 2E+02 0.0042 29.1 12.1 97 27-127 181-289 (527)
209 PRK05677 long-chain-fatty-acid 53.4 1.3E+02 0.0029 30.7 10.9 82 206-288 48-134 (562)
210 TIGR02316 propion_prpE propion 53.0 1.1E+02 0.0023 32.0 10.2 95 186-284 65-163 (628)
211 PLN02861 long-chain-fatty-acid 52.5 1.1E+02 0.0025 32.1 10.3 85 206-291 76-164 (660)
212 PRK13391 acyl-CoA synthetase; 52.3 1.7E+02 0.0037 29.4 11.4 96 186-289 10-109 (511)
213 PRK08276 long-chain-fatty-acid 52.1 1.2E+02 0.0026 30.4 10.1 83 207-290 11-97 (502)
214 PRK08314 long-chain-fatty-acid 52.1 1.5E+02 0.0032 30.1 10.9 84 207-291 35-123 (546)
215 TIGR01136 cysKM cysteine synth 51.7 1E+02 0.0022 28.6 8.8 89 29-120 22-113 (299)
216 PRK10696 tRNA 2-thiocytidine b 51.5 1.6E+02 0.0035 26.6 9.8 71 48-118 12-94 (258)
217 cd01449 TST_Repeat_2 Thiosulfa 51.2 33 0.00073 26.3 4.7 41 50-90 64-104 (118)
218 COG2236 Predicted phosphoribos 51.0 27 0.00058 29.8 4.3 33 38-70 5-37 (192)
219 COG0318 CaiC Acyl-CoA syntheta 50.7 1.7E+02 0.0037 29.8 11.0 91 187-285 25-119 (534)
220 PLN02574 4-coumarate--CoA liga 50.4 2.2E+02 0.0047 29.1 11.9 97 186-290 52-153 (560)
221 PRK10524 prpE propionyl-CoA sy 50.0 2.1E+02 0.0045 29.8 11.8 95 186-284 66-164 (629)
222 PLN00011 cysteine synthase 50.0 1.1E+02 0.0025 28.7 8.9 68 52-120 56-124 (323)
223 PRK11493 sseA 3-mercaptopyruva 50.0 26 0.00057 32.1 4.6 52 39-90 201-257 (281)
224 PRK09088 acyl-CoA synthetase; 49.9 1.7E+02 0.0036 29.2 10.8 77 207-284 22-102 (488)
225 PRK07787 acyl-CoA synthetase; 49.6 2.2E+02 0.0048 28.2 11.5 84 38-126 146-231 (471)
226 PRK07059 Long-chain-fatty-acid 49.6 1.9E+02 0.004 29.5 11.2 83 206-289 47-133 (557)
227 PRK07470 acyl-CoA synthetase; 49.3 2.7E+02 0.0057 28.1 12.2 89 38-127 181-270 (528)
228 PRK12476 putative fatty-acid-- 48.8 2.7E+02 0.0058 28.9 12.3 100 187-289 48-155 (612)
229 PRK13383 acyl-CoA synthetase; 48.7 1.3E+02 0.0028 30.3 9.8 83 207-290 60-146 (516)
230 PRK05605 long-chain-fatty-acid 48.6 1.1E+02 0.0025 31.2 9.5 83 207-290 57-143 (573)
231 PRK06164 acyl-CoA synthetase; 47.7 1.4E+02 0.003 30.3 9.9 96 28-127 180-285 (540)
232 TIGR03588 PseC UDP-4-keto-6-de 47.2 92 0.002 30.0 8.1 66 50-118 55-128 (380)
233 cd00640 Trp-synth-beta_II Tryp 47.1 2.1E+02 0.0045 25.4 9.9 67 55-122 41-107 (244)
234 cd01561 CBS_like CBS_like: Thi 47.1 2.1E+02 0.0045 26.3 10.1 64 57-121 45-109 (291)
235 PRK08162 acyl-CoA synthetase; 46.9 1.2E+02 0.0027 30.7 9.4 83 207-290 43-129 (545)
236 PRK06087 short chain acyl-CoA 46.7 1.6E+02 0.0036 29.8 10.3 77 206-283 48-128 (547)
237 TIGR01138 cysM cysteine syntha 46.5 1.5E+02 0.0032 27.4 8.9 89 29-119 23-113 (290)
238 TIGR02304 aden_form_hyp probab 46.2 1.7E+02 0.0037 28.8 9.7 85 59-146 138-222 (430)
239 PLN02479 acetate-CoA ligase 46.2 2.4E+02 0.0051 28.9 11.3 80 207-287 45-128 (567)
240 TIGR03443 alpha_am_amid L-amin 45.9 1.5E+02 0.0033 34.4 10.9 97 186-283 249-349 (1389)
241 PRK11658 UDP-4-amino-4-deoxy-L 45.8 97 0.0021 29.9 7.9 63 50-116 59-126 (379)
242 PRK06702 O-acetylhomoserine am 45.4 1.1E+02 0.0023 30.3 8.1 12 264-275 299-310 (432)
243 PRK12492 long-chain-fatty-acid 45.4 1.6E+02 0.0035 30.1 10.0 80 206-286 48-132 (562)
244 PLN02860 o-succinylbenzoate-Co 45.1 1.1E+02 0.0025 31.2 8.8 78 207-285 32-113 (563)
245 PRK08751 putative long-chain f 45.1 1.5E+02 0.0032 30.3 9.7 82 207-289 50-136 (560)
246 PRK08043 bifunctional acyl-[ac 45.0 1.6E+02 0.0034 31.4 10.1 92 27-121 363-465 (718)
247 COG1064 AdhP Zn-dependent alco 44.9 1E+02 0.0023 29.0 7.5 61 55-119 158-218 (339)
248 PRK10717 cysteine synthase A; 44.7 1.5E+02 0.0032 28.0 8.8 88 30-120 29-119 (330)
249 TIGR01734 D-ala-DACP-lig D-ala 44.4 3.4E+02 0.0073 27.1 12.2 86 38-126 159-247 (502)
250 PRK06381 threonine synthase; V 44.4 2.1E+02 0.0046 26.7 9.8 97 20-122 21-120 (319)
251 COG1022 FAA1 Long-chain acyl-C 44.2 1.7E+02 0.0037 30.3 9.5 102 24-129 186-297 (613)
252 cd01519 RHOD_HSP67B2 Member of 43.8 52 0.0011 24.5 4.7 53 38-90 36-92 (106)
253 cd06448 L-Ser-dehyd Serine deh 43.8 2.3E+02 0.0049 26.6 9.8 90 28-120 15-106 (316)
254 PRK10252 entF enterobactin syn 43.3 2.8E+02 0.0061 32.0 12.4 98 27-127 596-705 (1296)
255 PRK08633 2-acyl-glycerophospho 43.3 2.7E+02 0.0057 31.6 12.1 97 27-126 780-887 (1146)
256 PRK15407 lipopolysaccharide bi 42.9 88 0.0019 30.9 7.2 56 59-118 106-166 (438)
257 TIGR03208 cyc_hxne_CoA_lg cycl 42.8 2.5E+02 0.0055 28.4 10.9 95 187-285 36-134 (538)
258 PRK10946 entE enterobactin syn 42.1 3.8E+02 0.0081 27.2 12.0 87 38-128 200-289 (536)
259 PLN02723 3-mercaptopyruvate su 42.0 47 0.001 31.2 5.0 52 39-90 238-295 (320)
260 PRK13382 acyl-CoA synthetase; 41.8 2E+02 0.0043 29.2 10.0 81 207-288 68-152 (537)
261 PRK13390 acyl-CoA synthetase; 41.7 3.3E+02 0.0072 27.2 11.5 92 186-285 10-105 (501)
262 COG4821 Uncharacterized protei 41.4 72 0.0016 27.3 5.2 55 45-120 85-140 (243)
263 PRK06018 putative acyl-CoA syn 41.2 2.7E+02 0.0058 28.3 10.8 83 206-289 38-124 (542)
264 cd02067 B12-binding B12 bindin 40.9 1.6E+02 0.0036 22.5 8.3 40 80-119 19-58 (119)
265 PRK07769 long-chain-fatty-acid 40.7 4.4E+02 0.0095 27.4 12.5 99 187-288 35-141 (631)
266 PF09269 DUF1967: Domain of un 39.6 31 0.00068 23.8 2.5 30 40-69 33-62 (69)
267 PRK12406 long-chain-fatty-acid 39.4 2E+02 0.0042 28.9 9.4 83 207-290 11-97 (509)
268 TIGR03595 Obg_CgtA_exten Obg f 39.3 37 0.00081 23.4 2.8 19 52-70 45-63 (69)
269 PLN02356 phosphateglycerate ki 38.9 1.9E+02 0.004 28.5 8.5 63 56-119 95-158 (423)
270 TIGR02370 pyl_corrinoid methyl 38.7 2.5E+02 0.0055 24.1 10.2 110 211-320 62-185 (197)
271 PRK06178 acyl-CoA synthetase; 38.5 2.1E+02 0.0045 29.3 9.5 84 207-291 58-145 (567)
272 PLN02550 threonine dehydratase 38.2 4.4E+02 0.0094 27.3 11.2 93 26-123 121-215 (591)
273 PRK05852 acyl-CoA synthetase; 38.2 2.4E+02 0.0052 28.5 9.9 87 38-127 194-283 (534)
274 cd01137 PsaA Metal binding pro 37.7 2.2E+02 0.0048 26.2 8.6 87 42-128 152-243 (287)
275 PRK08180 feruloyl-CoA synthase 37.6 3.1E+02 0.0067 28.5 10.7 94 186-284 52-154 (614)
276 KOG1250 Threonine/serine dehyd 37.5 1.4E+02 0.003 28.7 7.0 55 69-123 118-172 (457)
277 cd00754 MoaD Ubiquitin domain 37.4 94 0.002 21.7 4.9 45 13-72 25-76 (80)
278 PRK02261 methylaspartate mutas 37.1 2.2E+02 0.0047 22.8 7.3 44 76-119 19-62 (137)
279 PTZ00216 acyl-CoA synthetase; 36.9 3.6E+02 0.0078 28.6 11.2 88 204-292 118-209 (700)
280 TIGR01137 cysta_beta cystathio 36.5 2.1E+02 0.0047 28.3 9.0 87 30-119 27-116 (454)
281 PLN02409 serine--glyoxylate am 35.7 2.8E+02 0.006 27.0 9.4 77 43-119 38-115 (401)
282 PRK07786 long-chain-fatty-acid 35.5 2.5E+02 0.0054 28.5 9.5 82 207-289 42-127 (542)
283 PF01297 TroA: Periplasmic sol 35.2 1.4E+02 0.003 26.8 6.8 86 42-129 127-217 (256)
284 cd01019 ZnuA Zinc binding prot 35.1 2.5E+02 0.0055 25.8 8.5 89 42-130 156-247 (286)
285 cd07050 BMC_EutL_repeat2 ethan 35.1 62 0.0013 22.9 3.3 40 53-92 3-43 (87)
286 cd01016 TroA Metal binding pro 35.0 2.6E+02 0.0056 25.6 8.5 87 43-129 137-228 (276)
287 PRK07476 eutB threonine dehydr 34.8 2.8E+02 0.006 26.1 8.9 55 69-123 71-125 (322)
288 PF08734 GYD: GYD domain; Int 34.8 1.8E+02 0.004 21.3 7.6 62 46-107 19-90 (91)
289 cd01529 4RHOD_Repeats Member o 34.3 1.5E+02 0.0032 21.6 5.7 48 39-89 34-81 (96)
290 PRK06060 acyl-CoA synthetase; 34.3 2.6E+02 0.0056 29.7 9.7 81 207-288 30-114 (705)
291 PRK05973 replicative DNA helic 34.0 1.3E+02 0.0028 26.8 6.1 90 11-111 20-115 (237)
292 PRK13237 tyrosine phenol-lyase 33.6 2.2E+02 0.0047 28.3 8.0 69 38-111 76-174 (460)
293 PF15136 UPF0449: Uncharacteri 33.4 1.4E+02 0.0031 22.1 5.1 51 8-58 8-78 (97)
294 cd02070 corrinoid_protein_B12- 33.2 3.2E+02 0.0068 23.5 10.2 87 230-316 84-179 (201)
295 PRK09162 hypoxanthine-guanine 32.8 1.3E+02 0.0028 25.5 5.7 46 37-83 14-59 (181)
296 PF10411 DsbC_N: Disulfide bon 32.2 41 0.00088 22.1 2.1 19 425-443 32-50 (57)
297 PRK06710 long-chain-fatty-acid 32.1 2.4E+02 0.0052 28.8 8.8 81 207-288 49-133 (563)
298 PRK08574 cystathionine gamma-s 32.0 2.2E+02 0.0048 27.6 7.9 10 327-336 325-334 (385)
299 cd00401 AdoHcyase S-adenosyl-L 31.8 4.9E+02 0.011 25.5 10.1 71 53-123 25-97 (413)
300 PRK07867 acyl-CoA synthetase; 31.8 3.5E+02 0.0077 27.3 9.9 83 207-290 28-115 (529)
301 PRK05939 hypothetical protein; 31.7 2.1E+02 0.0046 27.8 7.8 30 86-117 108-137 (397)
302 KOG0025 Zn2+-binding dehydroge 31.6 1.6E+02 0.0034 27.1 6.1 66 59-124 156-222 (354)
303 TIGR01101 V_ATP_synt_F vacuola 31.4 2.5E+02 0.0054 21.8 8.5 78 62-146 3-93 (115)
304 PF00818 Ice_nucleation: Ice n 31.3 25 0.00053 16.3 0.6 9 330-338 1-9 (16)
305 cd06451 AGAT_like Alanine-glyo 31.0 3.2E+02 0.0069 25.8 8.9 77 41-118 26-104 (356)
306 PRK12582 acyl-CoA synthetase; 30.9 2.5E+02 0.0054 29.2 8.8 78 206-284 79-165 (624)
307 PRK06382 threonine dehydratase 30.9 3.2E+02 0.0069 26.7 8.9 61 60-123 71-131 (406)
308 cd06447 D-Ser-dehyd D-Serine d 30.8 1.9E+02 0.0042 28.2 7.2 58 67-124 136-193 (404)
309 PF01436 NHL: NHL repeat; Int 30.7 94 0.002 16.7 3.5 18 431-448 9-26 (28)
310 PRK10287 thiosulfate:cyanide s 30.4 1.7E+02 0.0037 22.0 5.5 49 38-93 41-89 (104)
311 PTZ00297 pantothenate kinase; 30.3 5.1E+02 0.011 30.4 11.2 98 206-309 456-556 (1452)
312 COG1167 ARO8 Transcriptional r 30.3 5.6E+02 0.012 25.5 13.6 57 62-119 177-234 (459)
313 cd01017 AdcA Metal binding pro 30.2 3E+02 0.0066 25.2 8.2 85 43-129 149-238 (282)
314 COG0365 Acs Acyl-coenzyme A sy 30.0 4.5E+02 0.0098 26.8 9.8 97 189-290 25-126 (528)
315 cd01563 Thr-synth_1 Threonine 30.0 1.7E+02 0.0037 27.4 6.7 89 29-123 38-128 (324)
316 TIGR02372 4_coum_CoA_lig 4-cou 30.0 5.2E+02 0.011 25.0 12.8 107 13-125 79-198 (386)
317 COG1171 IlvA Threonine dehydra 29.7 4.8E+02 0.011 24.8 9.3 98 27-128 38-137 (347)
318 PRK04813 D-alanine--poly(phosp 29.4 5.7E+02 0.012 25.3 11.7 85 38-125 161-248 (503)
319 PF09153 DUF1938: Domain of un 29.2 1.4E+02 0.0031 21.3 4.3 40 31-74 16-62 (86)
320 cd01448 TST_Repeat_1 Thiosulfa 29.1 1.3E+02 0.0029 23.1 5.0 41 50-90 65-106 (122)
321 PRK08974 long-chain-fatty-acid 29.1 2.8E+02 0.0062 28.2 8.7 80 207-287 48-132 (560)
322 PF01276 OKR_DC_1: Orn/Lys/Arg 29.1 1.1E+02 0.0023 30.0 5.1 118 14-148 66-206 (417)
323 PRK08813 threonine dehydratase 29.0 4.2E+02 0.0092 25.2 9.0 82 38-124 59-140 (349)
324 PRK09545 znuA high-affinity zi 28.9 3.5E+02 0.0077 25.2 8.5 84 42-129 180-270 (311)
325 PRK10595 SOS cell division inh 28.7 2.3E+02 0.005 23.6 6.2 14 104-117 99-112 (164)
326 cd02070 corrinoid_protein_B12- 28.1 3.9E+02 0.0084 23.0 11.6 84 36-119 47-141 (201)
327 PRK06814 acylglycerophosphoeth 27.9 5.2E+02 0.011 29.3 11.2 96 27-125 791-897 (1140)
328 cd01562 Thr-dehyd Threonine de 27.7 2.5E+02 0.0054 25.9 7.4 57 65-122 66-122 (304)
329 PF07994 NAD_binding_5: Myo-in 27.7 4.3E+02 0.0094 24.5 8.5 69 41-111 127-225 (295)
330 smart00450 RHOD Rhodanese Homo 27.6 1.9E+02 0.0041 20.6 5.5 40 51-90 43-82 (100)
331 PRK09192 acyl-CoA synthetase; 27.5 4.7E+02 0.01 26.8 10.0 85 206-291 48-143 (579)
332 TIGR02035 D_Ser_am_lyase D-ser 27.0 2.3E+02 0.0051 27.9 7.1 62 66-127 153-214 (431)
333 COG2897 SseA Rhodanese-related 27.0 1.2E+02 0.0026 27.9 4.7 55 38-92 202-262 (285)
334 PRK09029 O-succinylbenzoic aci 26.8 3.7E+02 0.008 26.5 8.9 79 206-285 27-109 (458)
335 PRK06145 acyl-CoA synthetase; 26.8 6.4E+02 0.014 25.0 11.9 86 38-127 167-254 (497)
336 PRK14807 histidinol-phosphate 26.8 2.8E+02 0.0062 26.2 7.7 14 200-213 218-231 (351)
337 PRK08134 O-acetylhomoserine am 26.8 3.5E+02 0.0075 26.7 8.4 57 69-125 83-142 (433)
338 TIGR02080 O_succ_thio_ly O-suc 26.6 3E+02 0.0066 26.6 7.9 51 69-119 70-123 (382)
339 TIGR01127 ilvA_1Cterm threonin 26.3 3.6E+02 0.0078 26.0 8.3 92 27-123 13-106 (380)
340 PF00156 Pribosyltran: Phospho 26.3 1.7E+02 0.0037 22.5 5.1 27 39-65 4-30 (125)
341 PRK07868 acyl-CoA synthetase; 26.1 6.5E+02 0.014 28.2 11.2 81 207-290 472-555 (994)
342 COG1916 Uncharacterized homolo 25.9 1.7E+02 0.0037 27.7 5.5 77 12-98 23-122 (388)
343 PRK08246 threonine dehydratase 25.7 4.8E+02 0.01 24.3 8.8 59 63-122 67-125 (310)
344 PRK06721 threonine synthase; R 25.5 2.7E+02 0.0058 26.6 7.2 57 67-123 77-134 (352)
345 PF00291 PALP: Pyridoxal-phosp 25.1 3.3E+02 0.0072 25.0 7.7 57 63-120 55-111 (306)
346 cd01524 RHOD_Pyr_redox Member 24.8 2.6E+02 0.0057 19.9 5.6 43 38-89 34-76 (90)
347 PRK05638 threonine synthase; V 24.4 2.4E+02 0.0052 27.9 6.8 91 29-125 80-172 (442)
348 TIGR02981 phageshock_pspE phag 24.1 2.5E+02 0.0054 21.0 5.4 49 38-93 39-87 (101)
349 PF11142 DUF2917: Protein of u 23.9 1.8E+02 0.0039 19.6 4.0 34 393-441 25-58 (63)
350 PRK07503 methionine gamma-lyas 23.8 3.9E+02 0.0085 26.0 8.1 13 205-217 222-234 (403)
351 COG5012 Predicted cobalamin bi 23.8 3.2E+02 0.007 24.0 6.4 83 238-320 115-205 (227)
352 TIGR02991 ectoine_eutB ectoine 23.7 4.5E+02 0.0097 24.6 8.2 53 69-121 71-123 (317)
353 TIGR03205 pimA dicarboxylate-- 23.7 4.4E+02 0.0096 26.6 9.0 77 207-284 46-126 (541)
354 cd01018 ZntC Metal binding pro 23.6 4.1E+02 0.0089 24.0 7.8 84 42-129 147-235 (266)
355 PRK08526 threonine dehydratase 23.6 5.3E+02 0.011 25.2 8.9 95 28-127 34-130 (403)
356 TIGR02326 transamin_PhnW 2-ami 23.4 4.8E+02 0.01 24.8 8.6 77 41-119 32-109 (363)
357 PF06277 EutA: Ethanolamine ut 23.3 5.6E+02 0.012 25.5 8.7 64 14-78 353-422 (473)
358 TIGR03531 selenium_SpcS O-phos 23.2 5.7E+02 0.012 25.4 9.0 59 56-117 141-210 (444)
359 PLN02238 hypoxanthine phosphor 23.2 2.2E+02 0.0047 24.3 5.5 22 38-59 10-31 (189)
360 cd02069 methionine_synthase_B1 23.0 5.1E+02 0.011 22.6 10.7 85 36-120 51-148 (213)
361 TIGR01203 HGPRTase hypoxanthin 22.9 3.9E+02 0.0085 22.1 6.9 45 40-85 3-48 (166)
362 COG2062 SixA Phosphohistidine 22.8 2.9E+02 0.0063 22.9 5.8 96 21-119 7-109 (163)
363 PRK05851 long-chain-fatty-acid 22.8 6.7E+02 0.015 25.2 10.0 97 187-289 16-121 (525)
364 PRK12483 threonine dehydratase 22.7 4.6E+02 0.01 26.7 8.4 94 30-128 53-148 (521)
365 PF08967 DUF1884: Domain of un 22.7 2.3E+02 0.005 20.2 4.4 68 44-127 9-76 (85)
366 PRK14185 bifunctional 5,10-met 22.7 5.8E+02 0.013 23.6 8.3 76 43-118 11-96 (293)
367 PLN02494 adenosylhomocysteinas 22.7 7.8E+02 0.017 24.7 9.6 67 55-121 37-105 (477)
368 PLN02723 3-mercaptopyruvate su 22.7 1.6E+02 0.0034 27.7 5.0 41 50-90 89-130 (320)
369 PRK08638 threonine dehydratase 22.3 4.9E+02 0.011 24.6 8.2 57 68-124 78-134 (333)
370 KOG0633 Histidinol phosphate a 22.3 2.2E+02 0.0048 25.6 5.3 68 52-119 98-168 (375)
371 PRK09177 xanthine-guanine phos 22.2 2.8E+02 0.006 22.8 5.7 38 39-78 9-46 (156)
372 PF00667 FAD_binding_1: FAD bi 21.9 96 0.0021 27.2 3.2 29 59-87 40-68 (219)
373 PRK07409 threonine synthase; V 21.9 3.1E+02 0.0068 26.1 6.9 56 67-122 80-136 (353)
374 cd00615 Orn_deC_like Ornithine 21.9 3.2E+02 0.007 25.1 6.9 55 61-118 96-161 (294)
375 PRK02991 D-serine dehydratase; 21.8 3.3E+02 0.0072 27.0 7.1 59 67-125 159-217 (441)
376 KOG1252 Cystathionine beta-syn 21.7 3.9E+02 0.0085 25.2 6.9 61 60-120 99-159 (362)
377 PRK09629 bifunctional thiosulf 21.6 1.6E+02 0.0034 30.6 5.0 41 50-90 209-249 (610)
378 PRK08198 threonine dehydratase 21.3 4.9E+02 0.011 25.3 8.3 61 64-125 70-130 (404)
379 PRK14665 mnmA tRNA-specific 2- 21.3 2.9E+02 0.0063 26.5 6.4 58 61-118 2-67 (360)
380 cd00378 SHMT Serine-glycine hy 21.3 1.1E+02 0.0025 29.6 3.9 58 61-118 102-168 (402)
381 PRK11493 sseA 3-mercaptopyruva 21.1 1.8E+02 0.004 26.6 5.0 43 48-90 71-114 (281)
382 TIGR01747 diampropi_NH3ly diam 21.1 7.6E+02 0.016 23.9 11.5 101 22-123 30-152 (376)
383 PRK06234 methionine gamma-lyas 21.0 4.9E+02 0.011 25.3 8.2 13 205-217 223-235 (400)
384 TIGR02618 tyr_phenol_ly tyrosi 21.0 3.6E+02 0.0078 26.7 7.0 68 38-110 69-166 (450)
385 PRK07768 long-chain-fatty-acid 20.8 7E+02 0.015 25.2 9.7 80 38-120 170-255 (545)
386 PF04122 CW_binding_2: Putativ 20.5 3.4E+02 0.0074 19.6 7.7 69 46-117 9-78 (92)
387 cd01526 RHOD_ThiF Member of th 20.4 4E+02 0.0087 20.4 8.1 52 38-89 45-97 (122)
388 cd01520 RHOD_YbbB Member of th 20.4 3.4E+02 0.0073 21.1 5.8 37 59-95 81-118 (128)
389 TIGR03366 HpnZ_proposed putati 20.4 5.2E+02 0.011 23.4 7.9 60 55-118 112-172 (280)
390 TIGR01279 DPOR_bchN light-inde 20.4 7.2E+02 0.016 24.3 9.2 90 16-118 261-350 (407)
391 PF13580 SIS_2: SIS domain; PD 20.2 2.9E+02 0.0062 22.0 5.4 54 41-94 80-136 (138)
392 PRK09224 threonine dehydratase 20.2 6.3E+02 0.014 25.6 8.9 94 26-124 32-127 (504)
393 PRK09331 Sep-tRNA:Cys-tRNA syn 20.2 4.1E+02 0.0089 25.6 7.5 55 61-118 99-165 (387)
394 TIGR03772 anch_rpt_subst ancho 20.1 6E+02 0.013 25.5 8.4 79 43-123 347-432 (479)
395 PF05221 AdoHcyase: S-adenosyl 20.0 6.7E+02 0.014 22.8 8.5 65 60-124 39-105 (268)
No 1
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.8e-74 Score=558.29 Aligned_cols=457 Identities=42% Similarity=0.667 Sum_probs=390.7
Q ss_pred ccccCCCCCCCCcchhHHHHHHHhhcCCC-cEEEeCC---eeeeHHHHHHHHHHHHHHHHHcC--CCCCCEEEEEcCCch
Q 036361 2 ELLLPNHANSTPLTTLGFLERAATAYSDC-PSIVYNN---TTYTWSETHRRCLQVASSLSSVG--IQRGHVVSVVAPNVP 75 (485)
Q Consensus 2 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~-~a~~~~~---~~~Ty~~l~~~~~~lA~~L~~~g--i~~gd~V~l~~~~~~ 75 (485)
+.+.+...+..+.+....+.+.+..+++. +.+++.. +.+||.|+++++.++|..|.++| +++||+|++++||++
T Consensus 4 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~ 83 (537)
T KOG1176|consen 4 EKLWKGPANNTPLTPITFLGRPAFVYLDRNTSLVYQDSDGRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTP 83 (537)
T ss_pred cccccCcccCccccccccccccccccccCcceEEEecCCCcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCH
Confidence 44555566777777777777887777777 8887765 89999999999999999999865 899999999999999
Q ss_pred hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCcc
Q 036361 76 SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTT 155 (485)
Q Consensus 76 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 155 (485)
++..+++||+.+|+++.++||...+.++...++.++++++|++....+.+.++..... ..++++...........
T Consensus 84 ~~~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~-----~~i~~l~~~~~~~~~~~ 158 (537)
T KOG1176|consen 84 EFVELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA-----LKIIVLTGDEGVISISD 158 (537)
T ss_pred HHHHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC-----CceEEEecccCcccccc
Confidence 9999999999999999999999999999999999999999999999999887765543 44555544311111110
Q ss_pred CCCccccccccc-cccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEE
Q 036361 156 TSPTVTVDFIDT-YEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLW 234 (485)
Q Consensus 156 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
. ..... +..+.....+.. .++...||++.++|||||||.||+|++||++++.+.......+..+..++.++
T Consensus 159 ~------~~~~~~~~~~~~~~~~~~--~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~ 230 (537)
T KOG1176|consen 159 L------VEDLDAFEDLMPEGLPDG--IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLC 230 (537)
T ss_pred c------cccccchhhccccCCCcc--cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEE
Confidence 0 00011 333333333333 45567799999999999999999999999999999888887788888999999
Q ss_pred ecchhhHhHHHHHHHHH-hhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCC
Q 036361 235 TLPMFHANGWGYTWGMA-AVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 235 ~~p~~~~~g~~~~~~~l-~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~ 311 (485)
.+|++|.+|+..++.++ ..|+++++.+.|++..+++.+++|++|++.++|..+..|++.+ ...+++++|.+.+||++
T Consensus 231 ~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~~~~~~l~sl~~v~~gga~ 310 (537)
T KOG1176|consen 231 TLPLFHIYGLITLLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAKSPIVKKYDLSSLRSVLSGGAP 310 (537)
T ss_pred echHHHHhHHHHHHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhcCCccCcccCCccEEEEecCCC
Confidence 99999999999977755 5555666667789999999999999999999999999999975 66889999999999999
Q ss_pred CChhhhhhhh-ccC-CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCC
Q 036361 312 PPAPVLSRTE-SMG-FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDG 389 (485)
Q Consensus 312 l~~~~~~~~~-~~~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~ 389 (485)
+++++.++++ +++ ..+.+.||+||+++.++.+.+.++ ...+++|.+.++. ++.+.+ ++|+.++++
T Consensus 311 ~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e----------~k~~svG~~~~g~-~~~v~~-e~g~~l~~~- 377 (537)
T KOG1176|consen 311 LSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPE----------RKPGSVGRLLPGV-RVKVLD-ETGVSLGPN- 377 (537)
T ss_pred CCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCcc----------CcccccCccccce-EEEeeC-CCCCCCCCC-
Confidence 9999999999 666 899999999999988887754332 4467999999976 777777 599999999
Q ss_pred ceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCc
Q 036361 390 VSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAV 469 (485)
Q Consensus 390 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v 469 (485)
+.||||++|++++.||++||+.|+..|+++|||+|||+|++|+||+|+|.+|++|+||.+|+.|+|.|||++|..||.|
T Consensus 378 -~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V 456 (537)
T KOG1176|consen 378 -QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDV 456 (537)
T ss_pred -CceEEEEECcccchhhcCChHHHHhhcccCCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCc
Confidence 7899999999999999999999999999779999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeccCCCCCCC
Q 036361 470 NEAAVVARPDKFWGET 485 (485)
Q Consensus 470 ~~~~v~~~~~~~~g~~ 485 (485)
.||+|+|.||+.+||.
T Consensus 457 ~eaaVvgipDe~~Ge~ 472 (537)
T KOG1176|consen 457 LEAAVVGIPDEVWGET 472 (537)
T ss_pred cEEEEEcccccccCCc
Confidence 9999999999999985
No 2
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=4.5e-73 Score=511.03 Aligned_cols=452 Identities=26% Similarity=0.354 Sum_probs=392.1
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
+....|+.++++..+++.||+.|.++. +.++||+|+.+.+..+|.+|..+|+++||+|++..||+.+|+.++|||.++
T Consensus 46 pl~~~Tigq~l~~~t~~v~dkea~Vf~~eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~l~~lA~A~A 125 (596)
T KOG1177|consen 46 PLDSETIGQLLETTTERVPDKEAAVFDHEGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWVLCQLACARA 125 (596)
T ss_pred CcccccHHHHHHHHhhccCcceEEEEeeccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHHHHHHHHHHh
Confidence 567889999999999999999999874 467999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc-----hHHHHHHhccCCCC----------CCCCeEEEecCCccccc
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHLH-----SSLVLEALSLFPRD----------TKRPHLVLVDDDAAASS 152 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~----------~~~~~~i~~~~~~~~~~ 152 (485)
|.+.+++||.+...+++..|++.+++++|+.+.. .+.+.++..++.+- ....++|..+++..
T Consensus 126 G~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~ed~~--- 202 (596)
T KOG1177|consen 126 GLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADEDHP--- 202 (596)
T ss_pred ceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCCCCc---
Confidence 9999999999999999999999999999997532 23344443332211 13345555553331
Q ss_pred CccCCCccccccccccccccccCCCCCC-----CCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCC
Q 036361 153 TTTTSPTVTVDFIDTYEGFVEEGDPKYK-----WVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVP 227 (485)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~ 227 (485)
..+...+++++........ ......+||++.|.|||||||.||++.+||.++++++......+++.
T Consensus 203 ---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~ 273 (596)
T KOG1177|consen 203 ---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYN 273 (596)
T ss_pred ---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcC
Confidence 1444556665555444211 11345679999999999999999999999999999999999999999
Q ss_pred CCCEEEEecchhhHhHHHH-HHHHHhhcceEeec-ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCc
Q 036361 228 KQPVYLWTLPMFHANGWGY-TWGMAAVGATNICL-RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPV 303 (485)
Q Consensus 228 ~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr 303 (485)
.++++.+..|++|.+|... ++.++..|++++++ +.|++...+++|+++++|.++++|+++..|++.+ ...+++++|
T Consensus 274 e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~~~~s~lr 353 (596)
T KOG1177|consen 274 EKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQVDLSSLR 353 (596)
T ss_pred cceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHHHHhcchhhccCchhhhh
Confidence 9999999999999999655 89999999999996 5799999999999999999999999999999887 667789999
Q ss_pred eEEeccCCCChhhhhhhh-ccCC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCC
Q 036361 304 QILTAGAPPPAPVLSRTE-SMGF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPET 381 (485)
Q Consensus 304 ~i~~~g~~l~~~~~~~~~-~~~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~ 381 (485)
.++.||+++++++.+.+. +.++ .+...||+||+++..+... ..+.....-.++|..+++. +..|+| ..
T Consensus 354 ~~vigGa~~s~eLlk~iv~~~~m~~i~v~YG~TEts~v~~~~~--------~~D~~~~~~ksVG~~m~h~-Ea~iv~-~~ 423 (596)
T KOG1177|consen 354 KGVIGGAPVSPELLKLIVNQMNMKDIAVAYGLTETSPVLFMSL--------LGDPPEERIKSVGHLMDHY-EAAIVD-KD 423 (596)
T ss_pred hheeCCCCCCHHHHHHHHHhhCceeeEEEeeccccCcceeeec--------CCCCHHHHHhhhhhccccc-cccccc-CC
Confidence 999999999999999998 4454 5888999999997776653 2334445556899999998 999999 58
Q ss_pred CCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 382 GESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 382 ~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
|..++.+ ..|||+++|+++|.|||++++.+......|.||+|||+|.+|++|.++++||++|+|+.+|++|+|.|||+
T Consensus 424 g~~v~~~--~~Gel~iRGY~tMl~Ywg~~~kT~eti~~drW~~TGDi~~m~enG~i~iVGRskdmI~rGGENVyP~ElE~ 501 (596)
T KOG1177|consen 424 GSEVPLG--TKGELLIRGYSTMLGYWGEEEKTKETIGNDRWYDTGDIAVMDENGTIEIVGRSKDMIIRGGENVYPTELED 501 (596)
T ss_pred CCccccC--CCceEEEEechhheeecCCcccchhhcccccceecCceEEEcCCCcEEEEEcccCeEEeCCcccChHHHHH
Confidence 9999999 77999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred HHhcCcCcceeEEEeccCCCCCCC
Q 036361 462 VLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
.|.+||.|.++.|+|++|+++||+
T Consensus 502 fL~~hp~V~~a~VVGV~D~R~GE~ 525 (596)
T KOG1177|consen 502 FLNKHPLVKEAHVVGVPDERLGEE 525 (596)
T ss_pred HHhhCCCeeeEEEEccCCCcccce
Confidence 999999999999999999999984
No 3
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=4.3e-70 Score=547.12 Aligned_cols=448 Identities=33% Similarity=0.499 Sum_probs=378.0
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCCee--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhc
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNNTT--YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 86 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~--~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~ 86 (485)
......++.+++.++++.+|+++|+.+.+.. +||+||+++++++|+.|++.|+++||+|+|+++|++++++++|||++
T Consensus 6 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~~a~~~ 85 (534)
T COG0318 6 RMTAELTLASLLERAARRNPDRPALIFLGRGGRLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAFLAALR 85 (534)
T ss_pred cccccccHHHHHHHHHHhCCCceEEEEcCCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 4456789999999999999999999998877 99999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccc
Q 036361 87 SGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFID 166 (485)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (485)
+|++++|+||.++..++.++++.++++.++++.+..+.........+ ....+........... .
T Consensus 86 ~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-------------~ 149 (534)
T COG0318 86 AGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEALP---VVLVVLLVGDADDRLP-------------I 149 (534)
T ss_pred cCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccCC---cceEEEeccccccccc-------------c
Confidence 99999999999999999999999999999999885555544443321 1122222111110000 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC--CCCCCEEEEecchhhHhHH
Q 036361 167 TYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA--VPKQPVYLWTLPMFHANGW 244 (485)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~ 244 (485)
.++.................++++++++|||||||.||+|++||+++..+.......+. +++.|++++.+|++|.+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl 229 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGL 229 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHH
Confidence 23333222222222222256889999999999999999999999999999988888888 8999999999999999999
Q ss_pred HHHHHH-HhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCC--CCCC-CceEEeccCCCChhhhh
Q 036361 245 GYTWGM-AAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFE--PLKT-PVQILTAGAPPPAPVLS 318 (485)
Q Consensus 245 ~~~~~~-l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~l~~-lr~i~~~g~~l~~~~~~ 318 (485)
...+.+ ++.|+++++.+ .|++..++..+.++++|++.++|.++..|++..... .+++ +|.++.||+++++++++
T Consensus 230 ~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~ 309 (534)
T COG0318 230 IVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDDDDLSSSLRLVLSGGAPLPPELLE 309 (534)
T ss_pred HHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCCccCccccccceEEEEecCCcCCHHHHH
Confidence 975554 88888888887 599999999999999999999999999999887333 3444 99999999999999999
Q ss_pred hhh-ccC-CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEE
Q 036361 319 RTE-SMG-FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVV 396 (485)
Q Consensus 319 ~~~-~~~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~ 396 (485)
+++ +++ ..+...||+||+++.++...... . .....++|.|.+++ +++|+|++.+++++ | +.|||+
T Consensus 310 ~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~-~--------~~~~~~~G~~~pg~-~v~Ivd~~~~~~~p-g--~vGei~ 376 (534)
T COG0318 310 RFEERFGPIAILEGYGLTETSPVVTINPPDD-L--------LAKPGSVGRPLPGV-EVRIVDPDGGEVLP-G--EVGEIW 376 (534)
T ss_pred HHHHHhCCCceEEeecccccCceeecCCCch-h--------hhcCCcccccCCCc-EEEEEeCCCCccCC-C--CceEEE
Confidence 999 666 57999999999997776654221 0 23455679999998 99999986665555 6 789999
Q ss_pred EecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEe
Q 036361 397 LRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVA 476 (485)
Q Consensus 397 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~ 476 (485)
++||+++.||+++++.+...|.++|||+|||+|++|+||+++|.||.+|+|+.+|++|+|.+||+++.+||.|.+++|++
T Consensus 377 irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l~~~~~V~~aavvg 456 (534)
T COG0318 377 VRGPNVMKGYWNRPEATAEAFDEDGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVLAEHPAVAEAAVVG 456 (534)
T ss_pred EECchhhhhhcCChHHHHHhhccCCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHHHhCCCcceEEEEe
Confidence 99999999999999999998875699999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCC
Q 036361 477 RPDKFWGET 485 (485)
Q Consensus 477 ~~~~~~g~~ 485 (485)
.+|+.+||+
T Consensus 457 vpd~~~Ge~ 465 (534)
T COG0318 457 VPDERWGER 465 (534)
T ss_pred CCCCccCce
Confidence 999999985
No 4
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-69 Score=476.84 Aligned_cols=444 Identities=23% Similarity=0.335 Sum_probs=393.3
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+...++.++|.++|.++||++|+++.++.+||++|++++.++|..|+++||++||+|.+-+||..+|++++||++++|+.
T Consensus 25 W~d~~l~d~L~~~A~~~pdriAv~d~~~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FALlrlGv~ 104 (542)
T COG1021 25 WQDRTLTDILTDHAARYPDRIAVIDGERRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFALLRLGVA 104 (542)
T ss_pred ccCCcHHHHHHHHHhhcCCceEEecCcccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHHHHHcCcc
Confidence 67789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCc-----chHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHL-----HSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
+|.-=|.....++.+......++.+|++.. ..+...+.....+ ..+.+++.++....
T Consensus 105 PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~---tlr~v~v~ge~~~~--------------- 166 (542)
T COG1021 105 PVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHP---TLRHVIVAGEAEHP--------------- 166 (542)
T ss_pred hhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCC---cceEEEEccCCCCc---------------
Confidence 999889889999999999999999999753 3344555555554 45666666443211
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
......+........+..+.++++++++..+.||||.||.|..+|.....+.++..+..+++++++.++.+|..|.+.+.
T Consensus 167 ~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfpls 246 (542)
T COG1021 167 SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLS 246 (542)
T ss_pred chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCC
Confidence 11222233344444445567788999999999999999999999999999999999999999999999999999999887
Q ss_pred H--HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 246 Y--TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 246 ~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
. .++.++.|+++|+.++.+|...+.+|+++++|+..++|.+...|++.. +..++++||.+-+||+.+++.+.+++.
T Consensus 247 sPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~~~LsSLrllQVGGarl~~~~Arrv~ 326 (542)
T COG1021 247 SPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAEWERADLSSLRLLQVGGARLSATLARRVP 326 (542)
T ss_pred CcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhhcccCCchheeEEeecCcccCHHHHhhch
Confidence 5 799999999999999999999999999999999999999999998776 677899999999999999999999999
Q ss_pred -ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC
Q 036361 322 -SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG 400 (485)
Q Consensus 322 -~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~ 400 (485)
.+++.+.+.|||.|.- +....- .+..+....+.|+|+....+++|+|. +|+++++| |.|+|..+||
T Consensus 327 ~~lgC~LQQVFGMAEGL-vnyTRL---------DDp~E~i~~TQGrPlsP~DEvrvvD~-dg~pv~pG--E~G~LltRGP 393 (542)
T COG1021 327 AVLGCQLQQVFGMAEGL-VNYTRL---------DDPPEIIIHTQGRPLSPDDEVRVVDA-DGNPVAPG--EVGELLTRGP 393 (542)
T ss_pred hhhCchHHHHhhhhhhh-hccccc---------CCchHheeecCCCcCCCcceeEEecC-CCCCCCCC--CcceeeecCC
Confidence 6799999999999964 332221 23334455688999988889999996 89999999 8899999999
Q ss_pred cccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 401 CVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
...+|||+.++-+...|+.+|+|+|||+++.++||++.+.||.+|+|+.+|++|..+|||+.|.+||.|.+|++++.+|+
T Consensus 394 YTirGYyrap~HNa~aF~a~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn~LL~HP~V~~AAlVampDe 473 (542)
T COG1021 394 YTIRGYYRAPEHNARAFDADGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVENLLLRHPAVHDAALVAMPDE 473 (542)
T ss_pred eeeeeeccCchhhhhccCcCCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHHHHhhCchhhhhhhhcCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 036361 481 FWGET 485 (485)
Q Consensus 481 ~~g~~ 485 (485)
.+||+
T Consensus 474 lLGEk 478 (542)
T COG1021 474 LLGEK 478 (542)
T ss_pred hcCcc
Confidence 99996
No 5
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=6.7e-68 Score=509.59 Aligned_cols=430 Identities=26% Similarity=0.332 Sum_probs=360.0
Q ss_pred HHHHHHh-hcCCCcEEEeCC-----eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 19 FLERAAT-AYSDCPSIVYNN-----TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 19 ~l~~~a~-~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
.++++.. ..++++|+++.+ +++||+||.+.++++|+.|++ .|+ +||||++++|+.+|.++++|||+++|++.
T Consensus 14 ~~dr~~~~~~~~~~aii~~~e~~~~~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~riGAI~ 92 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFDGEDGLFRELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARIGAIP 92 (528)
T ss_pred hhhhhhhccCCCceEEEEEcCCCCceEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHcCCEE
Confidence 4556655 347899999864 689999999999999999987 678 99999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|+.+..+++.+...++.++++++|+........+...-......-...++++.... ..|.+.
T Consensus 93 ~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~-----------------~~~~~~ 155 (528)
T COG0365 93 AVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG-----------------LWYDEA 155 (528)
T ss_pred eecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc-----------------ccHHHH
Confidence 999999999999999999999999998765543221110000000000023222211 334444
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH-HhCCCCCCEEEEecchhhHhHHHH-HHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI-DWAVPKQPVYLWTLPMFHANGWGY-TWG 249 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 249 (485)
...........+ .+++|+++++|||||||+||+|+++|..++........ .+.+.++|++++..++.|.+|... +++
T Consensus 156 ~~~~~~~~~~~~-~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~ 234 (528)
T COG0365 156 VEKASEKFEFEP-LPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFS 234 (528)
T ss_pred hhccCCCCCccc-cCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHH
Confidence 444333333332 78899999999999999999999999988777665554 567789999999999999999987 899
Q ss_pred HHhhcceEeeccc--C-CHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc
Q 036361 250 MAAVGATNICLRR--F-DASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM 323 (485)
Q Consensus 250 ~l~~G~~~~~~~~--~-~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~ 323 (485)
++..|+++++... + ++..+++.|+++++|.++..|+.++.|.+.. +..++++||.+.+.||+++++.++++. .+
T Consensus 235 pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~ 314 (528)
T COG0365 235 PLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKLGLGEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL 314 (528)
T ss_pred HHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhcCCcccccchhheeeeccCCCCCHHHHHHHHHHh
Confidence 9999999998852 3 4999999999999999999999999999886 678899999999999999999999999 55
Q ss_pred CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC--c
Q 036361 324 GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG--C 401 (485)
Q Consensus 324 ~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~--~ 401 (485)
|++|.+.||+||+|++...... ...+++.|.|.+|. ++.|+|++ |++++++ + |+|+++.+ +
T Consensus 315 g~~i~d~~gqTEtg~~~~~~~~------------~~~~g~~g~p~pG~-~~~vvdd~-g~~~~~~--~-G~Lvi~~~~p~ 377 (528)
T COG0365 315 GVWILDIYGQTETGMGFIAGRP------------PVKNGSSGLPLPGY-AVRRVDDE-GNPVPPG--V-GELVVRLPWPG 377 (528)
T ss_pred CCCEeccccccccCccccCCCC------------CcCCCCCCCCCCCc-eeEEECCC-CCcCCCC--c-eEEEEeCCCch
Confidence 9999999999999955554321 22344559999999 99999976 9999999 7 99999987 9
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++++||+|++...+.+.+. ||.|||.+++|+||+++|+||.||+||+.|+++.+.|||++|.+||+|.||+|++.+|+.
T Consensus 378 ~~~~~w~d~er~~~~y~~~-~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaEaAvVg~pd~~ 456 (528)
T COG0365 378 MALTYWNDPERYKEAYFGR-WYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAEAAVVGVPDPG 456 (528)
T ss_pred hhhhhhCCHHHHHHHHhhc-eeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceeeeEEEeccCCC
Confidence 9999999999988888734 999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q 036361 482 WGET 485 (485)
Q Consensus 482 ~g~~ 485 (485)
.||+
T Consensus 457 kg~~ 460 (528)
T COG0365 457 KGQI 460 (528)
T ss_pred CCcE
Confidence 9974
No 6
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.1e-67 Score=542.42 Aligned_cols=446 Identities=22% Similarity=0.274 Sum_probs=350.7
Q ss_pred cchhHHHHHHHhhcCCCcEEEeC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 14 LTTLGFLERAATAYSDCPSIVYN----N-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
.|+.++|+++++.+|+++|+.+. + ..+||+||.++++++|++|+++|+++||+|+|+++|+++|++++|||
T Consensus 45 ~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~ 124 (666)
T PLN02614 45 DSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEAC 124 (666)
T ss_pred CcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999842 1 35899999999999999999999999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
+++|++++|+++..+.+++.++++.++++++|++.+....+........ .....++.+++.......... .....
T Consensus 125 ~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~--~~l~~vi~~~~~~~~~~~~~~---~~~~~ 199 (666)
T PLN02614 125 NAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFKTCPNST--EYMKTVVSFGGVSREQKEEAE---TFGLV 199 (666)
T ss_pred HHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHHhccccc--ccceEEEEeCCCChHHhhhhh---hcCcE
Confidence 9999999999999999999999999999999998765443322211110 023455555432100000000 00001
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh-----CCCCCCEEEEecchh
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW-----AVPKQPVYLWTLPMF 239 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~ 239 (485)
...++++...............++|+++|+|||||||.||||++||+++..++......+ .+..+|++++.+|++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~ 279 (666)
T PLN02614 200 IYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTVKDVYLSYLPLA 279 (666)
T ss_pred EEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCCCcEEEEeccHH
Confidence 123333333221111111224578999999999999999999999999988776655443 467899999999999
Q ss_pred hHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC------------------------
Q 036361 240 HANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD------------------------ 295 (485)
Q Consensus 240 ~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------------------------ 295 (485)
|.+++...+.++..|+++++.+ +++..+++.+++++||+++++|++++.+.+...
T Consensus 280 H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 358 (666)
T PLN02614 280 HIFDRVIEECFIQHGAAIGFWR-GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGFLKKFVFDSAFSYKFGN 358 (666)
T ss_pred HHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 9999876666778899988775 589999999999999999999999998763110
Q ss_pred ---------CC-------------CC-CCCceEEeccCCCChhhhhhhhcc-CCeeeeccCCccccccccccCCCCCCCC
Q 036361 296 ---------FE-------------PL-KTPVQILTAGAPPPAPVLSRTESM-GFVVCHGYGLTETAGLVVSCSWKPEWDK 351 (485)
Q Consensus 296 ---------~~-------------~l-~~lr~i~~~g~~l~~~~~~~~~~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~ 351 (485)
.. .+ +++|.+++||+++++.+.+.++.+ ++.+++.||+||+++..+.....
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~----- 433 (666)
T PLN02614 359 MKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHVESFLRVVACCHVLQGYGLTESCAGTFVSLPD----- 433 (666)
T ss_pred HHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHhcCCCEEeeCchHhhhhheeeeccc-----
Confidence 00 11 689999999999998764444455 58999999999997544322110
Q ss_pred CChHHHhhhhhccCccccCcceeEEecCCC--CCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceE
Q 036361 352 LPLEERARLKARQGVKTVGLTEVDVVNPET--GESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIA 429 (485)
Q Consensus 352 ~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~--~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~ 429 (485)
+ ....+++|+|.+++ +++|+|.++ +.++++| +.|||+++||+++.||+++++.|...|. +|||+|||+|
T Consensus 434 ---~--~~~~gsvG~p~pg~-evki~d~~~~~~~~~~~g--~~GEl~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TGDlg 504 (666)
T PLN02614 434 ---E--LDMLGTVGPPVPNV-DIRLESVPEMEYDALAST--PRGEICIRGKTLFSGYYKREDLTKEVLI-DGWLHTGDVG 504 (666)
T ss_pred ---c--CCcCCcccCcCCce-EEEEeeecccCcccCCCC--CCceEEEcCCcccccccCCHHHhhhhhc-cCCcccceEE
Confidence 0 11246899999998 999998322 4678888 7899999999999999999999999986 8999999999
Q ss_pred EEecCceEEEEccCCceEEe-CCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 430 VMHVDGYVEIKDRSKDVIIS-GGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 430 ~~~~~g~l~~~gR~~~~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
++|+||+|+|+||.+|+||+ +|++|+|.+||++|.+||+|.+++|+|.++
T Consensus 505 ~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~~~V~g~~~ 555 (666)
T PLN02614 505 EWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDSVWVYGNSF 555 (666)
T ss_pred EEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeEEEEEecCC
Confidence 99999999999999999995 799999999999999999999999999874
No 7
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-67 Score=538.24 Aligned_cols=449 Identities=19% Similarity=0.225 Sum_probs=360.8
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC--C---eeeeHHHHHHHHHHHHHHHHHc---CCCCC-----------CEEEEEc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN--N---TTYTWSETHRRCLQVASSLSSV---GIQRG-----------HVVSVVA 71 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~--~---~~~Ty~~l~~~~~~lA~~L~~~---gi~~g-----------d~V~l~~ 71 (485)
....|+.++|.++++.+|+++|+.+. + +++||+||.+++.++|++|.+. |+++| |+|+|++
T Consensus 58 ~~~~~l~~~l~~~~~~~p~~~Al~~~~~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~ 137 (746)
T PTZ00342 58 YVYKHIMKLLLEKYKLNNNKIAIVEHSCGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYG 137 (746)
T ss_pred cccchHHHHHHHHHhhcCCceeEeccCCCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEc
Confidence 34678999999999999999999873 2 6899999999999999999974 99999 9999999
Q ss_pred CCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccc
Q 036361 72 PNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAAS 151 (485)
Q Consensus 72 ~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 151 (485)
+|+++|+++.+||+++|++.+|+++.++.+++.++|+.++++++|++.+..+.+.+.....+ ..+.+++++......
T Consensus 138 ~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~~~~~---~l~~ii~~~~~~~~~ 214 (746)
T PTZ00342 138 SNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERKNELP---HLKKLIILDTLIKSK 214 (746)
T ss_pred CCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhhccCC---CceEEEEECCCCccc
Confidence 99999999999999999999999999999999999999999999998777777666555444 456777776421100
Q ss_pred cC---------------ccCCCc----------------------c-----------------ccccccccccccccCCC
Q 036361 152 ST---------------TTTSPT----------------------V-----------------TVDFIDTYEGFVEEGDP 177 (485)
Q Consensus 152 ~~---------------~~~~~~----------------------~-----------------~~~~~~~~~~~~~~~~~ 177 (485)
.. ...... . .......+++.......
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 294 (746)
T PTZ00342 215 EININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTT 294 (746)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhccc
Confidence 00 000000 0 00000111121111111
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh--CCCCCCEEEEecchhhHhHHHHHHHHHhhcc
Q 036361 178 KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW--AVPKQPVYLWTLPMFHANGWGYTWGMAAVGA 255 (485)
Q Consensus 178 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~ 255 (485)
.....+..++++++|+|||||||.||||++||+++..++....... ...+.+++++.+|++|.+++...+.+++.|+
T Consensus 295 -~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~ 373 (746)
T PTZ00342 295 -NYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVIAYLSFMLGG 373 (746)
T ss_pred -CCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCC
Confidence 1112234678999999999999999999999999998876654322 2235689999999999999987778889999
Q ss_pred eEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCC--------C--CC-----------------------------
Q 036361 256 TNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNS--------P--DF----------------------------- 296 (485)
Q Consensus 256 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~--------~--~~----------------------------- 296 (485)
++++.+. ++..+++.|++++||+++++|.+++.|.+. . +.
T Consensus 374 ~i~~~~~-~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~v~ 452 (746)
T PTZ00342 374 TINIWSK-DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNNGGFSKFLEGITHIS 452 (746)
T ss_pred EEEEeCC-CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhcCCcchHHHHHHHHH
Confidence 9988865 899999999999999999999999998642 1 00
Q ss_pred -----CCCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccc-c
Q 036361 297 -----EPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKT-V 369 (485)
Q Consensus 297 -----~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~ 369 (485)
.-.+++|.+++||+++++++.++++ .+++++++.||+||+++.++..... ....+++|.|+ +
T Consensus 453 ~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~i~~gYGlTEt~~~~~~~~~~-----------~~~~gsvG~p~~p 521 (746)
T PTZ00342 453 SKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVNYYQGYGLTETTGPIFVQHAD-----------DNNTESIGGPISP 521 (746)
T ss_pred HHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCCEEEeeccCcccceeeeccCC-----------CCCcccccCcCCC
Confidence 0025899999999999999999998 5799999999999997665443210 12346899998 8
Q ss_pred CcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEE-
Q 036361 370 GLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVII- 448 (485)
Q Consensus 370 ~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~- 448 (485)
++ +++|+|.+++.....+ ..|||+++||+++.||+++++.|...|..||||+|||+|++|+||+|+|+||.+|+||
T Consensus 522 g~-e~ki~d~~~~~~~~~~--~~GEl~vrGp~v~~GY~~~pe~T~~~f~~dGW~~TGDig~~d~dG~l~i~gR~kdlIkl 598 (746)
T PTZ00342 522 NT-KYKVRTWETYKATDTL--PKGELLIKSDSIFSGYFLEKEQTKNAFTEDGYFKTGDIVQINKNGSLTFLDRSKGLVKL 598 (746)
T ss_pred cE-EEEEecccccccCCCC--CceEEEEecCcccccccCChhhhhhhcCcCCcccCCcEEEECCCCeEEEEccCCCeEEe
Confidence 88 9999986554444444 5699999999999999999999999998899999999999999999999999999999
Q ss_pred eCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 449 SGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 449 ~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
.+|++|+|.+||+++.++|.|.+|+|+|.+
T Consensus 599 s~Ge~I~p~eIE~~l~~~p~V~~~~VvG~~ 628 (746)
T PTZ00342 599 SQGEYIETDMLNNLYSQISFINFCVVYGDD 628 (746)
T ss_pred CCCEEEchHHHHHHHhcCCCccEEEEEccC
Confidence 589999999999999999999999999975
No 8
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=6.2e-67 Score=538.49 Aligned_cols=447 Identities=23% Similarity=0.283 Sum_probs=362.5
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEe----CC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVY----NN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 80 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~----~~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~ 80 (485)
.....+++++|+++++.+|+++|+.+ .+ +.+||+||.++++++|++|++.|+++||+|+|+++|+++|+++
T Consensus 40 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~ 119 (651)
T PLN02736 40 HPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIV 119 (651)
T ss_pred CCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHH
Confidence 34556899999999999999999943 11 4699999999999999999999999999999999999999999
Q ss_pred HHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 81 QFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
++||+++|++++|+++..+.+++.++++.++++++|++.+..+.+.......+ ..+.+++.+........ ....
T Consensus 120 ~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~--~~~~- 193 (651)
T PLN02736 120 DHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQTLNTLLSCLSEIP---SVRLIVVVGGADEPLPS--LPSG- 193 (651)
T ss_pred HHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHHHHHHHHHhhcCC---CceEEEEECCCchhhhh--hhcc-
Confidence 99999999999999999999999999999999999999877666655544333 34555555422110000 0000
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
.......++++............+..++++++|+|||||||.||+|++||+++..++.+....+++.++|++++.+|++|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~lPl~h 273 (651)
T PLN02736 194 TGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISYLPLAH 273 (651)
T ss_pred CCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEeCCHHH
Confidence 00112234444333222111122346789999999999999999999999999998888887888899999999999999
Q ss_pred HhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--------------------------
Q 036361 241 ANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-------------------------- 294 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------------------------- 294 (485)
.+++..++.++..|+++++.+. ++..+++.|+++++|+++++|.+++.+.+..
T Consensus 274 ~~~~~~~~~~l~~G~~i~~~~~-~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (651)
T PLN02736 274 IYERVNQIVMLHYGVAVGFYQG-DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQAL 352 (651)
T ss_pred HHHHHHHHHHHHcCCEEEEeCC-CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999888888999999887764 8889999999999999999999998875431
Q ss_pred ----CC-------------CCC-CCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChH
Q 036361 295 ----DF-------------EPL-KTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLE 355 (485)
Q Consensus 295 ----~~-------------~~l-~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~ 355 (485)
.. ..+ +++|.+++||+++++++.++++ .+++++++.||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~--------- 423 (651)
T PLN02736 353 ENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICFGGRVLEGYGMTETSCVISGMDEG--------- 423 (651)
T ss_pred HcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHhCCCeEEEechHHhchheeccCCC---------
Confidence 00 001 4799999999999999999998 5699999999999998665543211
Q ss_pred HHhhhhhccCccccCcceeEEecCCCCCc---ccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEe
Q 036361 356 ERARLKARQGVKTVGLTEVDVVNPETGES---VKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMH 432 (485)
Q Consensus 356 ~~~~~~~~~G~~~~~~~~~~i~~~~~~~~---~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~ 432 (485)
....+++|.|.+++ +++|+|.+++.. ..++ +.|||+++||+++.||+++++.+...|..+|||+|||+|++|
T Consensus 424 --~~~~~~vG~p~pg~-~v~i~d~~~~~~~~~~~~~--~~GEl~vrgp~v~~GY~~~~~~t~~~~~~dgw~~TGDlg~~d 498 (651)
T PLN02736 424 --DNLSGHVGSPNPAC-EVKLVDVPEMNYTSEDQPY--PRGEICVRGPIIFKGYYKDEVQTREVIDEDGWLHTGDIGLWL 498 (651)
T ss_pred --CCCCCccCCccCce-EEEEEEccccCcccCCCCC--CCceEEecCCccccccccCHHHHHhhhccCCCeeccceEEEc
Confidence 12346899999999 999998544322 2222 459999999999999999999999999779999999999999
Q ss_pred cCceEEEEccCCceEEe-CCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 433 VDGYVEIKDRSKDVIIS-GGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 433 ~~g~l~~~gR~~~~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
+||+|+|+||.+|+||+ +|++|+|.+||++|.+||.|.+|+|+|.
T Consensus 499 ~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~ 544 (651)
T PLN02736 499 PGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQCFVYGD 544 (651)
T ss_pred CCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeEEEEEec
Confidence 99999999999999996 7999999999999999999999999984
No 9
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=3.6e-66 Score=525.43 Aligned_cols=458 Identities=24% Similarity=0.325 Sum_probs=369.5
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
++..+.++.++|+++++++|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~la~~~~G 81 (563)
T PLN02860 2 ANHSQAHICQCLTRLATLRGNAVVTISGNRRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLLAVACAG 81 (563)
T ss_pred cchhhhHHHHHHHHHHHhcCCceEEecCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHhhcc
Confidence 46778999999999999999999999988999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++++||++.++.+++.++++.+++++++++.+........... .......++..++.... ... ........
T Consensus 82 av~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~i~~~~~~~~-~~~------~~~~~~~~ 152 (563)
T PLN02860 82 GIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQND--RLPSLMWQVFLESPSSS-VFI------FLNSFLTT 152 (563)
T ss_pred EEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhc--cCCceeEEEEecCcccc-ccc------chhhcccc
Confidence 9999999999999999999999999999987654333322111 01122223333321100 000 00000111
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHH
Q 036361 169 EGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTW 248 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 248 (485)
+++...............++++++++|||||||.||+|+++|+++..++......+.+.++|+++...|++|..++..++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~ 232 (563)
T PLN02860 153 EMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGGLSSAL 232 (563)
T ss_pred chhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhccHHHHH
Confidence 11111100011111123568999999999999999999999999988777776778889999999999999999998888
Q ss_pred HHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhhc-c
Q 036361 249 GMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTES-M 323 (485)
Q Consensus 249 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~ 323 (485)
.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.. ....++++|.+++||+++++++.+++++ +
T Consensus 233 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 312 (563)
T PLN02860 233 AMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKSMTWKVFPSVRKILNGGGSLSSRLLPDAKKLF 312 (563)
T ss_pred HHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhhccccccceeEEEeCCCcCCHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999998654 2245789999999999999999999984 4
Q ss_pred -CCeeeeccCCccccccccccCCCCC-CCCC-----------ChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCc
Q 036361 324 -GFVVCHGYGLTETAGLVVSCSWKPE-WDKL-----------PLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGV 390 (485)
Q Consensus 324 -~~~i~~~Yg~tE~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~ 390 (485)
++++++.||+||+++.++....... .... ..........++|+|.+++ +++|++++ +|
T Consensus 313 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~-~v~i~~~~------~g-- 383 (563)
T PLN02860 313 PNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHV-ELKIGLDE------SS-- 383 (563)
T ss_pred CCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCc-EEEEecCC------CC--
Confidence 7899999999999765543321111 0000 0000011123689999998 99999864 45
Q ss_pred eecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcc
Q 036361 391 SLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVN 470 (485)
Q Consensus 391 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~ 470 (485)
+.|||+++|++++.||+++++.+...+..+|||+|||+|++|+||++++.||.+|+||++|++|+|.+||+++.+||+|.
T Consensus 384 ~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~ 463 (563)
T PLN02860 384 RVGRILTRGPHVMLGYWGQNSETASVLSNDGWLDTGDIGWIDKAGNLWLIGRSNDRIKTGGENVYPEEVEAVLSQHPGVA 463 (563)
T ss_pred ceeEEEEecCcccccccCCccccchhccCCCeEEccceEEEcCCCCEEEeecccceeEECCEEccHHHHHHHHHhCCCcc
Confidence 78999999999999999999999988887999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeccCCCCCC
Q 036361 471 EAAVVARPDKFWGE 484 (485)
Q Consensus 471 ~~~v~~~~~~~~g~ 484 (485)
+++|++.+++..||
T Consensus 464 ~~~v~~~~~~~~~~ 477 (563)
T PLN02860 464 SVVVVGVPDSRLTE 477 (563)
T ss_pred eeEEEEEecCcCCc
Confidence 99999999988776
No 10
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.7e-66 Score=532.62 Aligned_cols=447 Identities=22% Similarity=0.293 Sum_probs=351.9
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeC-------C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYN-------N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~-------~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
...|+.++|+++++++|+++|+... + +++||+||.++++++|++|.++|+++||+|+|+++|+++|++++|
T Consensus 41 ~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 120 (660)
T PLN02861 41 DIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAME 120 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3458899999999999999999641 1 479999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccc
Q 036361 83 GVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTV 162 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 162 (485)
||+++|++++||++..+.+++.++++.++++++|++.+..+.+......... ..+.++.+++........ . ....
T Consensus 121 A~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~--~l~~ii~~~~~~~~~~~~-~--~~~~ 195 (660)
T PLN02861 121 ACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKISSILSCLPKCSS--NLKTIVSFGDVSSEQKEE-A--EELG 195 (660)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHHHHHHHhhhhCCC--CCEEEEEECCCChhhhhh-h--hcCC
Confidence 9999999999999999999999999999999999987665554443332211 244566554321100000 0 0000
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC-----CCCCCEEEEecc
Q 036361 163 DFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA-----VPKQPVYLWTLP 237 (485)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p 237 (485)
.....+.++....... ...++..++++++|+|||||||.||||++||+++..++......+. +.++|++++.+|
T Consensus 196 ~~~~~~~~~~~~~~~~-~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lP 274 (660)
T PLN02861 196 VSCFSWEEFSLMGSLD-CELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLP 274 (660)
T ss_pred cEEEEHHHHHHhCccc-CCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHHHhccccccccCCCCCEEEEECc
Confidence 0112333333222111 1122346789999999999999999999999999988766655443 467899999999
Q ss_pred hhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-----------------------
Q 036361 238 MFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----------------------- 294 (485)
Q Consensus 238 ~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----------------------- 294 (485)
++|.+++...+.+++.|+++++.+ +++..+++.|++++||+++++|++++.|.+..
T Consensus 275 l~H~~~~~~~~~~l~~G~~v~~~~-~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~ 353 (660)
T PLN02861 275 LAHVYDQVIETYCISKGASIGFWQ-GDIRYLMEDVQALKPTIFCGVPRVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKL 353 (660)
T ss_pred HHHHHHHHHHHHHHHhCCEEEEeC-CCHHHHHHHHHHhCCcEEeechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 999999876666889999988774 68999999999999999999999999886410
Q ss_pred --------------CCC---------CC-CCCceEEeccCCCChhhhhhhhccCC-eeeeccCCccccccccccCCCCCC
Q 036361 295 --------------DFE---------PL-KTPVQILTAGAPPPAPVLSRTESMGF-VVCHGYGLTETAGLVVSCSWKPEW 349 (485)
Q Consensus 295 --------------~~~---------~l-~~lr~i~~~g~~l~~~~~~~~~~~~~-~i~~~Yg~tE~~~~~~~~~~~~~~ 349 (485)
... .+ +++|.+++||+++++++.+.++.++. .+++.||+||+++.++.....
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~--- 430 (660)
T PLN02861 354 GNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVEEFLRVTSCSVLSQGYGLTESCGGCFTSIAN--- 430 (660)
T ss_pred HHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHcCCCeeEecchhhhhhceeecccc---
Confidence 000 11 57899999999999997654445554 799999999997655432110
Q ss_pred CCCChHHHhhhhhccCccccCcceeEEecC-CCC-CcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCc
Q 036361 350 DKLPLEERARLKARQGVKTVGLTEVDVVNP-ETG-ESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGD 427 (485)
Q Consensus 350 ~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~-~~~-~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD 427 (485)
.....+++|+|.+++ +++|+|. ++| ..+.++ +.|||+++||+++.||+++++.+...|. +|||+|||
T Consensus 431 -------~~~~~gsvG~p~p~~-ev~i~d~~~~g~~~~~~~--~~GEi~vrGp~v~~GY~~~pe~T~~~f~-dGw~~TGD 499 (660)
T PLN02861 431 -------VFSMVGTVGVPMTTI-EARLESVPEMGYDALSDV--PRGEICLRGNTLFSGYHKRQDLTEEVLI-DGWFHTGD 499 (660)
T ss_pred -------cCCCCCCccCccCce-EEEEEEccccCcccCCCC--CceeEEEcCCcccccccCCHHHHHhhhh-ccCcccCc
Confidence 011246899999998 9999983 334 333444 5699999999999999999999999996 89999999
Q ss_pred eEEEecCceEEEEccCCceEEe-CCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 428 IAVMHVDGYVEIKDRSKDVIIS-GGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 428 ~~~~~~~g~l~~~gR~~~~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
+|++|+||+|+|+||.+|+||. +|++|+|.+||++|.+||.|.+|+|+|.++
T Consensus 500 lg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~~a~V~G~~~ 552 (660)
T PLN02861 500 IGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIASIWVYGNSF 552 (660)
T ss_pred eEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCeeEEEEEecCC
Confidence 9999999999999999999995 899999999999999999999999999874
No 11
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4.1e-66 Score=503.79 Aligned_cols=441 Identities=27% Similarity=0.381 Sum_probs=352.6
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNN----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
.-....++..++.+++..+|+.+|+.... ..+||+|+.+++.++|++|+..|+.+||+|+|+..|+++|+++.+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~a~ 90 (613)
T COG1022 11 DVAEIHTLPKRLAERVKDRPDGVALMYKELGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADLAI 90 (613)
T ss_pred hhhhcccHHHHHHHHhhcCCcceeEeeecCCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 33456788899999999999999998654 78999999999999999999999977999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc-chHHHHHHhccCCCCCCCCeEEEecCC-ccccc-CccCCCccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL-HSSLVLEALSLFPRDTKRPHLVLVDDD-AAASS-TTTTSPTVT 161 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~-~~~~~~~~~ 161 (485)
+.+|++.||+.+..+++++.++|+.+++++||++.. ..+.+......++. ....+...+. ..... .........
T Consensus 91 ~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (613)
T COG1022 91 LALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPK---VVDLIVIIDLVREAVEAKALVLEVFP 167 (613)
T ss_pred HHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccc---hhhhhhhhhhhhhccchhhccccccc
Confidence 999999999999999999999999999999999974 44444444433221 1111111110 00000 000000000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC-CCCCCEEEEecchhh
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA-VPKQPVYLWTLPMFH 240 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~ 240 (485)
..+...+ ............+..+||+|.|+|||||||.||||++||+|+..++........ .+++|++++.+|+.|
T Consensus 168 ~~~~~~~---~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfLPlaH 244 (613)
T COG1022 168 DEGISLF---LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFLPLAH 244 (613)
T ss_pred cccchhh---hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeCcHHH
Confidence 0000000 011111122224577899999999999999999999999999999999999996 999999999999999
Q ss_pred HhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----------C---------------
Q 036361 241 ANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----------D--------------- 295 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----------~--------------- 295 (485)
.+...+.......+ ........++..+++.+++++||.+.++|.+|+.+.+.. +
T Consensus 245 i~Er~~~~~~~~~~-g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~~~ 323 (613)
T COG1022 245 IFERAFEGGLALYG-GVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYKKI 323 (613)
T ss_pred HHHHHHHHHHHhhc-ceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 99887643333333 333333348999999999999999999999999886542 0
Q ss_pred ------------------------CCCC-CCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccCCCCCCC
Q 036361 296 ------------------------FEPL-KTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWD 350 (485)
Q Consensus 296 ------------------------~~~l-~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~ 350 (485)
+..+ .++|.+++||+++++++...++..|+++.+.||+||+++.++.+++..
T Consensus 324 ~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~lGi~i~eGYGlTEts~~~~v~~~~~--- 400 (613)
T COG1022 324 SRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSLGIPILEGYGLTETSAVVSVNPPDR--- 400 (613)
T ss_pred HhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHcCCCeEEEecccccccceEEccccC---
Confidence 0011 378999999999999999999999999999999999998887764322
Q ss_pred CCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEE
Q 036361 351 KLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAV 430 (485)
Q Consensus 351 ~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~ 430 (485)
...+++|.|++++ +++|.|. |||+|+||++|+|||++|+.|.+.|++||||+|||+|.
T Consensus 401 --------~~~gtvG~p~p~~-evKI~d~-------------GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg~ 458 (613)
T COG1022 401 --------FVLGTVGKPLPGI-EVKIADD-------------GEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLGE 458 (613)
T ss_pred --------cccCCcCCcCCCc-eEEEccC-------------ceEEEecchhcchhcCChHHHhhhccccCCcccCceeE
Confidence 2346899999999 9999993 99999999999999999999999999999999999999
Q ss_pred EecCceEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 431 MHVDGYVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 431 ~~~~g~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
+|++|+|++.||.+|+|+ .+|++|.|+.||+.+.++|.|.+++|+|-.+.+
T Consensus 459 ~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~qi~vvg~~k~~ 510 (613)
T COG1022 459 LDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQICVVGDDKKF 510 (613)
T ss_pred EcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeEEEEEecCCcc
Confidence 999999999999999999 899999999999999999999999999944433
No 12
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.7e-65 Score=518.68 Aligned_cols=475 Identities=48% Similarity=0.861 Sum_probs=376.3
Q ss_pred CccccCCCCCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 036361 1 MELLLPNHANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 80 (485)
Q Consensus 1 ~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~ 80 (485)
|+-+...+++..+.++.++|+++++.+|+++|+.+.+.++||+||.++++++|+.|.++|+++||+|+|+++|+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~ 80 (579)
T PLN03102 1 MDNLALCEANNVPLTPITFLKRASECYPNRTSIIYGKTRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEM 80 (579)
T ss_pred CCCccCCccccccccHHHHHHHHHHhCCCCeEEEECCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHH
Confidence 55667778888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCC--CCCeEEEecCCcccccCccCCC
Q 036361 81 QFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDT--KRPHLVLVDDDAAASSTTTTSP 158 (485)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~ 158 (485)
+|||+++|++++||++..+.+++.++++.++++++|++.+..+.+.++........ ....++.++........ .
T Consensus 81 ~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-- 156 (579)
T PLN03102 81 HFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRP--S-- 156 (579)
T ss_pred HHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCC--c--
Confidence 99999999999999999999999999999999999999887776665544332110 11234444322110000 0
Q ss_pred ccccccccccccccccCCCCCC----CCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEE
Q 036361 159 TVTVDFIDTYEGFVEEGDPKYK----WVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLW 234 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
.....+.++......... ......++++++++|||||||.||+|+++|+++..........+.+...+++++
T Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (579)
T PLN03102 157 ----SEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLW 232 (579)
T ss_pred ----ccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEe
Confidence 011122222222111110 011234679999999999999999999999998666555544556677889999
Q ss_pred ecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCC
Q 036361 235 TLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPP 312 (485)
Q Consensus 235 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l 312 (485)
.+|++|..++...+.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+... ....++++.+++||+++
T Consensus 233 ~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~gg~~~ 312 (579)
T PLN03102 233 TLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLDLSPRSGPVHVLTGGSPP 312 (579)
T ss_pred cCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccccCCcccceEEEECCCCC
Confidence 9999999998877888899999999988899999999999999999999999999987652 23445788899999999
Q ss_pred ChhhhhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCcee
Q 036361 313 PAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSL 392 (485)
Q Consensus 313 ~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~ 392 (485)
++.+.++++++++++++.||+||+++.++.+.....+...+...........|.+..+...+.+.+++.+++++.++.+.
T Consensus 313 ~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~i~~~~~~~~v~~~~~~~ 392 (579)
T PLN03102 313 PAALVKKVQRLGFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLADVDVKNKETQESVPRDGKTM 392 (579)
T ss_pred CHHHHHHHHHcCCeEEeecCccccCccccccccccccccCCcccccccccCCCcccccccceEEeccccccccCCCCCCc
Confidence 99999998888999999999999987655443222221111111111112234333333366777776777777643367
Q ss_pred cEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCccee
Q 036361 393 GEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEA 472 (485)
Q Consensus 393 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~ 472 (485)
|||+++|++++.||+++++.+...|. +|||+|||+|++|+||++++.||.+|+|+.+|.+|+|.+||+.+.++|.|.++
T Consensus 393 GEl~v~g~~~~~GY~~~~~~t~~~f~-~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a 471 (579)
T PLN03102 393 GEIVIKGSSIMKGYLKNPKATSEAFK-HGWLNTGDVGVIHPDGHVEIKDRSKDIIISGGENISSVEVENVLYKYPKVLET 471 (579)
T ss_pred eEEEEECcchhhhhcCChhhhHhhhc-cCceecCceEEEcCCCeEEEEeccCcEEEECCEEECHHHHHHHHHhCCCccee
Confidence 99999999999999999999998887 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCC
Q 036361 473 AVVARPDKFWGE 484 (485)
Q Consensus 473 ~v~~~~~~~~g~ 484 (485)
+|++.+++..|+
T Consensus 472 ~vv~~~~~~~~~ 483 (579)
T PLN03102 472 AVVAMPHPTWGE 483 (579)
T ss_pred EEEeccCccccc
Confidence 999999988775
No 13
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-65 Score=518.38 Aligned_cols=438 Identities=25% Similarity=0.332 Sum_probs=368.8
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
.++.++++++++.+|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~~~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~~~v~ 128 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDERGTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAAGKVGARIIL 128 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEECCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCCEEEE
Confidence 38899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++.++++.++++++|++.+....+.+...... .. ..+.......... ......++++..
T Consensus 129 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~---------~~~~~~~~~~~~ 195 (549)
T PRK07788 129 LNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSALPPDLG---RL-RAWGGNPDDDEPS---------GSTDETLDDLIA 195 (549)
T ss_pred eCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhhccccc---cc-eEEEEecCccccC---------CcCcccHHHHhc
Confidence 9999999999999999999999999877666544322211 11 1221111110000 012233444433
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAV 253 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 253 (485)
..... ..+...+++++++|||||||.||+|.++|+++...+......+.+..+++++...|++|.+|+..++.++..
T Consensus 196 ~~~~~---~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~ 272 (549)
T PRK07788 196 GSSTA---PLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMAL 272 (549)
T ss_pred CCCCC---CCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHh
Confidence 32221 112345688999999999999999999999999888887778888899999999999999999878888999
Q ss_pred cceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC----CCCCCCCceEEeccCCCChhhhhhhh-ccCCeee
Q 036361 254 GATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD----FEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVC 328 (485)
Q Consensus 254 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~ 328 (485)
|+++++.+.+++..+++.++++++|++.++|+++..+++... ...++++|.+++||+++++++.+++. .++..++
T Consensus 273 G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~ 352 (549)
T PRK07788 273 GSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSALSPELATRALEAFGPVLY 352 (549)
T ss_pred CCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccccCCCCCCceeEEEEeCCCCCHHHHHHHHHHhCccce
Confidence 999999888999999999999999999999999999987652 34578999999999999999999998 5688999
Q ss_pred eccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccC
Q 036361 329 HGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFK 408 (485)
Q Consensus 329 ~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~ 408 (485)
+.||+||++..+..+. ........++|.|.+++ +++|+|+ +++++++| +.|||+++|++++.||++
T Consensus 353 ~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~gY~~ 418 (549)
T PRK07788 353 NLYGSTEVAFATIATP----------EDLAEAPGTVGRPPKGV-TVKILDE-NGNEVPRG--VVGRIFVGNGFPFEGYTD 418 (549)
T ss_pred eccCcchhchhhccCh----------hhhhhcCCCcccCCCCc-EEEEECC-CcCCCCCC--CeEEEEEeCCCccccccC
Confidence 9999999976544321 11122346899999998 9999996 78899998 889999999999999998
Q ss_pred ChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 409 DKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
++.. ... +|||+|||+|++++||.+++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|++
T Consensus 419 ~~~~---~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~~~~~~~g~~ 491 (549)
T PRK07788 419 GRDK---QII-DGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDVVEAAVIGVDDEEFGQR 491 (549)
T ss_pred CCcc---ccc-CCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCeeEEEEECCcCcccccE
Confidence 8765 222 789999999999999999999999999999999999999999999999999999999999988763
No 14
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.3e-64 Score=516.09 Aligned_cols=461 Identities=26% Similarity=0.367 Sum_probs=370.2
Q ss_pred cCCCCCCCCcchhHHHHHHHhhcCCCcEEEe--------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh
Q 036361 5 LPNHANSTPLTTLGFLERAATAYSDCPSIVY--------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS 76 (485)
Q Consensus 5 ~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~--------~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~ 76 (485)
++-.....+.|++++|+++++.+|+++|+.+ ..+++||+||.+++.++|+.|++.|+++||+|+++++|+++
T Consensus 16 ~~~~~~~~~~t~~~~l~~~a~~~p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e 95 (632)
T PRK07529 16 VPLAARDLPASTYELLSRAAARHPDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPE 95 (632)
T ss_pred CCchhhcCCCCHHHHHHHHHHHCCCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH
Confidence 3445567788999999999999999999986 24789999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccc
Q 036361 77 MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAAS 151 (485)
Q Consensus 77 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 151 (485)
+++++|||+++| +++|+++.++++++.++++.++++++|++.... +.+.......+ ..+.++.++......
T Consensus 96 ~~~~~lA~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~ 171 (632)
T PRK07529 96 THFALWGGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALP---ELRTVVEVDLARYLP 171 (632)
T ss_pred HHHHHHHHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCC---cceeEEEecCccccc
Confidence 999999999999 569999999999999999999999999986532 23333333333 345555554332100
Q ss_pred cCccCC----CccccccccccccccccCCCC-CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCC
Q 036361 152 STTTTS----PTVTVDFIDTYEGFVEEGDPK-YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAV 226 (485)
Q Consensus 152 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~ 226 (485)
...... ..........+.+.+...... ........++++++++|||||||.||+|.+||+++..++......+.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~ 251 (632)
T PRK07529 172 GPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGL 251 (632)
T ss_pred ccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCC
Confidence 000000 000011222333333332211 111223467899999999999999999999999999888777777888
Q ss_pred CCCCEEEEecchhhHhHHHH-HHHHHhhcceEeeccc--C-C---HHHHHHHHHhcCceeeecchHHHHHHhCCC-CCCC
Q 036361 227 PKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICLRR--F-D---ASAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEP 298 (485)
Q Consensus 227 ~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~--~-~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~ 298 (485)
.+++++++.+|++|.+++.. ++.++..|+++++.+. + + ...+++.++++++|++.++|+++..|.+.. ....
T Consensus 252 ~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 331 (632)
T PRK07529 252 GPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVPVDGHD 331 (632)
T ss_pred CCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccCCC
Confidence 99999999999999988765 7888999999998753 2 2 357899999999999999999999998876 3347
Q ss_pred CCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEe
Q 036361 299 LKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVV 377 (485)
Q Consensus 299 l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~ 377 (485)
++++|.+++||+++++++.++++ .+++++++.||+||++.++..+.... ....+++|.|.++. .++|+
T Consensus 332 ~~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~~----------~~~~~svG~~~p~~-~v~i~ 400 (632)
T PRK07529 332 ISSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLTEATCVSSVNPPDG----------ERRIGSVGLRLPYQ-RVRVV 400 (632)
T ss_pred ccceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeecccccCcccccCCccc----------cccCCCcccccCCc-eEEEE
Confidence 88999999999999999999998 56999999999999986654432110 12346899999998 88885
Q ss_pred --cCCCC---CcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCe
Q 036361 378 --NPETG---ESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGE 452 (485)
Q Consensus 378 --~~~~~---~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~ 452 (485)
|+ ++ +++++| +.|||+++|++++.||++++. +...+..++||+|||+|++++||.+++.||.+|+||++|+
T Consensus 401 ~~d~-~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~G~ 476 (632)
T PRK07529 401 ILDD-AGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAH-NKGLWLEDGWLNTGDLGRIDADGYFWLTGRAKDLIIRGGH 476 (632)
T ss_pred EcCC-CCcccccCCCC--CceEEEEECCCccccccCCcc-ccccccCCCceEcCcEEEEcCCceEEEEecccCEEEeCCE
Confidence 43 45 788888 889999999999999998654 4455545899999999999999999999999999999999
Q ss_pred eechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 453 NICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 453 ~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+|+|.+||+.|.+||+|.+|+|++.+++..||
T Consensus 477 ~i~p~eIE~~l~~~p~V~~a~vvg~~d~~~ge 508 (632)
T PRK07529 477 NIDPAAIEEALLRHPAVALAAAVGRPDAHAGE 508 (632)
T ss_pred EECHHHHHHHHHhCCCeeEEEEEeccCCCCCc
Confidence 99999999999999999999999999998886
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.5e-64 Score=518.66 Aligned_cols=454 Identities=17% Similarity=0.218 Sum_probs=354.8
Q ss_pred hhHHHHHHHhh--cCCCcEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 16 TLGFLERAATA--YSDCPSIVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 16 l~~~l~~~a~~--~p~~~a~~~~------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
..+++++++.. +|+++|+++. .+++||+||.++++++|+.|+++|+++||+|+++++|++++++++|||+++
T Consensus 61 ~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~lA~~~~ 140 (647)
T PTZ00237 61 CYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAMLSCARI 140 (647)
T ss_pred HHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHh
Confidence 35677787754 7999999873 368999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc---------chHHHHHHhccCCCCCCCCeEEEecCCccc-ccCc-cC
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHL---------HSSLVLEALSLFPRDTKRPHLVLVDDDAAA-SSTT-TT 156 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~---------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~-~~ 156 (485)
|++++|+++..+.+++.+++++++++++|++.. ..+.+.++..... . ...+++.+...... .... ..
T Consensus 141 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~vi~~~~~~~~~~~~~~~~ 218 (647)
T PTZ00237 141 GATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELST-F-KPSNVITLFRNDITSESDLKKI 218 (647)
T ss_pred CcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhccc-C-CCCEEEEEEcCCcccccccccc
Confidence 999999999999999999999999999999752 2233333332111 0 12345543221100 0000 00
Q ss_pred CCccccccccccccccccC----CCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHH-HHHHHHHHHHHhCCCCCCE
Q 036361 157 SPTVTVDFIDTYEGFVEEG----DPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRG-IFILTANALIDWAVPKQPV 231 (485)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~-~~~~~~~~~~~~~~~~~~~ 231 (485)
...........|++++... ........+..++++++|+|||||||.||+|+++|.+ +..........+....+++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~ 298 (647)
T PTZ00237 219 ETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSIIEKDIPTV 298 (647)
T ss_pred cccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhcCCCCCcE
Confidence 0000001112233333211 1111112235678999999999999999999999998 4433333344456777899
Q ss_pred EEEecchhhHhHHHHHHHHHhhcceEeeccc--CC----HHHHHHHHHhcCceeeecchHHHHHHhCCC-------CCCC
Q 036361 232 YLWTLPMFHANGWGYTWGMAAVGATNICLRR--FD----ASAISDLIQKHNVTHMCGAPVVLNMISNSP-------DFEP 298 (485)
Q Consensus 232 ~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~--~~----~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~ 298 (485)
+++..|++|..+...++.++..|+++++.+. +. +..+++.++++++|++.++|++++.|.+.. ...+
T Consensus 299 ~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~ 378 (647)
T PTZ00237 299 VFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEATIIRSKYD 378 (647)
T ss_pred EEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccccccccccC
Confidence 9999999998766678899999999998753 22 688999999999999999999999998643 2236
Q ss_pred CCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEe
Q 036361 299 LKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVV 377 (485)
Q Consensus 299 l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~ 377 (485)
++++|.++++|+++++++.++++ .+++++++.||+||+++.++...... ....+++|.|.+++ +++|+
T Consensus 379 l~~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~~yG~TE~~~~~~~~~~~~----------~~~~~s~G~p~~g~-~~~i~ 447 (647)
T PTZ00237 379 LSNLKEIWCGGEVIEESIPEYIENKLKIKSSRGYGQTEIGITYLYCYGHI----------NIPYNATGVPSIFI-KPSIL 447 (647)
T ss_pred cchheEEEecCccCCHHHHHHHHHhcCCCEEeeechHHhChhhhccCCCC----------CCCCCCCccCcCCc-eEEEE
Confidence 78999999999999999999988 56999999999999986544321100 11136889999998 99999
Q ss_pred cCCCCCcccCCCceecEEEEecC---cccccccCChhhhcccccC-CCeeecCceEEEecCceEEEEccCCceEEeCCee
Q 036361 378 NPETGESVKRDGVSLGEVVLRGG---CVTVGYFKDKESTRRCISD-NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGEN 453 (485)
Q Consensus 378 ~~~~~~~~~~g~~~~Gel~v~~~---~~~~gy~~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~ 453 (485)
|+ +|+++++| +.|||++++| +++.||+++++.+...|.. +|||+|||+|++|+||.++++||.||+||++|++
T Consensus 448 d~-~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~~~g~~~TGDlg~~d~dG~l~i~GR~dd~i~~~G~r 524 (647)
T PTZ00237 448 SE-DGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLFSKFPGYYNSGDLGFKDENGYYTIVSRSDDQIKISGNK 524 (647)
T ss_pred CC-CCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHHhCCCCEEECCcEEEECCCCeEEEEeccCCEEEECCEE
Confidence 96 89999988 8899999986 7899999999988876653 7899999999999999999999999999999999
Q ss_pred echHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 454 ICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 454 i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
|+|.|||++|.+||.|.+|+|++.+++..|++
T Consensus 525 I~p~eIE~~l~~~p~V~eaavvg~~~~~~g~~ 556 (647)
T PTZ00237 525 VQLNTIETSILKHPLVLECCSIGIYDPDCYNV 556 (647)
T ss_pred eCHHHHHHHHHhCCCceeeEEEeeEcCCCCCE
Confidence 99999999999999999999999999988763
No 16
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4e-64 Score=515.92 Aligned_cols=449 Identities=21% Similarity=0.253 Sum_probs=359.0
Q ss_pred hHHHHHHHhhcCCCcEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 17 LGFLERAATAYSDCPSIVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+++|+++++.+|+++|+++. .+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 55 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~~~Gav 134 (628)
T TIGR02316 55 HNALDRHLDERGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACARIGAI 134 (628)
T ss_pred HHHHHHHhCcCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 57788888889999999872 368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcc---------hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLH---------SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
++|+++..+.+++..+++.++++++|++... ...+.++..... .....+++++......... .
T Consensus 135 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~vi~~~~~~~~~~~~---~--- 206 (628)
T TIGR02316 135 HSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQ--HPPPHVLLVDRGLAPMRLI---P--- 206 (628)
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcC--CCCCEEEEEeCCCCCcCcc---c---
Confidence 9999999999999999999999999997642 222333222221 1234566665321100000 0
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHH-HHHHHHHhCCCCCCEEEEecchhh
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFIL-TANALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
.....+.++...............++++++|+|||||||.||+|+++|.++..+ .......++++++|++++..|++|
T Consensus 207 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 285 (628)
T TIGR02316 207 -GRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSASDVGW 285 (628)
T ss_pred -CccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcCCCCe
Confidence 011223333222211111112246789999999999999999999999998644 344455578899999999999999
Q ss_pred HhHHH-HHHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCC
Q 036361 241 ANGWG-YTWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 241 ~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~ 311 (485)
..++. .++.+++.|+++++.+. +++..+++.++++++|+++++|++++.|.+.. ...+++++|.++++|++
T Consensus 286 ~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gGe~ 365 (628)
T TIGR02316 286 VVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAAWLRKHDLSSLHWLFLAGEP 365 (628)
T ss_pred eehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecCC
Confidence 98864 47889999999998763 57899999999999999999999999998654 23568899999999999
Q ss_pred CChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCc
Q 036361 312 PPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGV 390 (485)
Q Consensus 312 l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~ 390 (485)
+++++.++++ .++..+++.||+||++..++....... ......+++|.|++++ +++|+|+++|+++++|
T Consensus 366 l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~~~~~~~-------~~~~~~gs~G~p~~g~-~v~i~d~~~g~~~~~g-- 435 (628)
T TIGR02316 366 LDEPTAHWITDGLGKPVIDNYWQTETGWPVLAIMPGLD-------LKPVKLGSPGLPMYGY-HLRVLDEATGRPCGPN-- 435 (628)
T ss_pred CCHHHHHHHHHHhCCCEEecccccccCceeecCCCCCC-------cCCCCCCCcccCcCCc-eEEEEECCCCCCCCCC--
Confidence 9999998887 568999999999999854433221100 0012236789999999 9999998789999988
Q ss_pred eecEEEEecC---cccccccCChhhhcccc---cCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh
Q 036361 391 SLGEVVLRGG---CVTVGYFKDKESTRRCI---SDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY 464 (485)
Q Consensus 391 ~~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~ 464 (485)
+.|||+++|| +++.||+++++.+...+ ..++||+|||+|++|+||.++++||.+|+||++|++|+|.|||++|.
T Consensus 436 ~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~G~rv~~~eIE~~l~ 515 (628)
T TIGR02316 436 EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLYSSFDWGIRDEDGYTFILGRTDDVINVAGHRLGTREIEESVS 515 (628)
T ss_pred CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEEECCceEEEcCCCcEEEEEcCcceEEeCCEEeCHHHHHHHHH
Confidence 7899999998 57889999887665433 23679999999999999999999999999999999999999999999
Q ss_pred cCcCcceeEEEeccCCCCCC
Q 036361 465 SNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 465 ~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|.+|+|++.+++..||
T Consensus 516 ~~p~V~ea~Vvg~~d~~~g~ 535 (628)
T TIGR02316 516 SHPSVAEVAVVGVHDELKGQ 535 (628)
T ss_pred hCCCcceEEEEeeecCCCCe
Confidence 99999999999999998876
No 17
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=2.7e-64 Score=507.93 Aligned_cols=443 Identities=18% Similarity=0.230 Sum_probs=357.7
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
....++.+.|.+.++++|+++|+.+.+ +++||+||.++++++|+.|.+ .+||+|+++++|++++++++|||+++|+
T Consensus 16 ~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~---~~gd~Val~~~n~~e~~~~~lA~~~~G~ 92 (539)
T PRK06334 16 RSGKTVLESFLKLCSEMTTATVCWDEQLGKLSYNQVRKAVIALATKVSK---YPDQHIGIMMPASAGAYIAYFATLLSGK 92 (539)
T ss_pred CcCCcHHHHHHHHHHhCCCceEEEeCCCCcccHHHHHHHHHHHHHHHhh---ccCCeEEEEcCCchHHHHHHHHHHhcCC
Confidence 455789999999999999999998766 799999999999999999987 3899999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++.++++.+++++++++.+....+.+....... ....++.+++........ . .....
T Consensus 93 v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~--------~-~~~~~ 161 (539)
T PRK06334 93 IPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAE--YPFSLIYMEEVRKELSFW--------E-KCRIG 161 (539)
T ss_pred eeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhcccc--ccccEEEEehhhhhccHH--------H-hhhhh
Confidence 999999999999999999999999999987765554443221000 012333333211000000 0 00000
Q ss_pred cccccCCC---CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH
Q 036361 170 GFVEEGDP---KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY 246 (485)
Q Consensus 170 ~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 246 (485)
........ .........++++++++|||||||.||+|++||+++..+.......+.+..+|++++.+|++|.+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~ 241 (539)
T PRK06334 162 IYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAYGFNS 241 (539)
T ss_pred hhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhhhhHH
Confidence 00000000 000012345789999999999999999999999999988877777788889999999999999999865
Q ss_pred -HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 247 -TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 247 -~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
++.++..|+++++.+ .+++..+++.|+++++|++.++|++++.|++.. ....++++|.+++||+++++++.++++
T Consensus 242 ~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~ 321 (539)
T PRK06334 242 CTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGDAFKDSLYQEALK 321 (539)
T ss_pred HHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCccCCHHHHHHHHH
Confidence 678889999988875 589999999999999999999999999998765 345678999999999999999999998
Q ss_pred cc-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC
Q 036361 322 SM-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG 400 (485)
Q Consensus 322 ~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~ 400 (485)
.+ ++.+++.||+||++.+++...... .....++|+|.+++ +++|+|++++.++++| +.|||+++|+
T Consensus 322 ~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~~~~~~~~~g--~~Gel~v~g~ 388 (539)
T PRK06334 322 TFPHIQLRQGYGTTECSPVITINTVNS----------PKHESCVGMPIRGM-DVLIVSEETKVPVSSG--ETGLVLTRGT 388 (539)
T ss_pred HCCCCeEEecccccccCceEEeccCCC----------CCCCCcCceecCCC-EEEEEcCCCCccCCCC--ceEEEEEecC
Confidence 45 689999999999987665432110 01234689999998 9999998788999999 8899999999
Q ss_pred cccccccCChhhhcccc-cCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcce------eE
Q 036361 401 CVTVGYFKDKESTRRCI-SDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNE------AA 473 (485)
Q Consensus 401 ~~~~gy~~~~~~~~~~~-~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~------~~ 473 (485)
+++.||+++++.+.... ..++||+|||+|++|++|.+++.||.+|+||++|++|+|.|||++|.+||+|.+ ++
T Consensus 389 ~~~~GY~~~~~~~~~~~~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~~~v~~~~~~~~~~ 468 (539)
T PRK06334 389 SLFSGYLGEDFGQGFVELGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEALESILMEGFGQNAADHAGPLV 468 (539)
T ss_pred cccccccCCcccccceeeCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHHHHHHHHccCCccccccCceE
Confidence 99999999988654322 336799999999999999999999999999999999999999999999999998 78
Q ss_pred EEeccCC
Q 036361 474 VVARPDK 480 (485)
Q Consensus 474 v~~~~~~ 480 (485)
|++.+++
T Consensus 469 v~~~~~~ 475 (539)
T PRK06334 469 VCGLPGE 475 (539)
T ss_pred EEcCCCC
Confidence 8888765
No 18
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=7.8e-65 Score=523.88 Aligned_cols=449 Identities=26% Similarity=0.330 Sum_probs=353.9
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeC------------C-----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYN------------N-----------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSV 69 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~------------~-----------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l 69 (485)
-.|+.++|+++++.+||++|+.+. + ..+||+||.++++++|++|.++|+++||+|+|
T Consensus 57 ~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai 136 (696)
T PLN02387 57 ATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERVCNFASGLVALGHNKEERVAI 136 (696)
T ss_pred CCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEE
Confidence 368999999999999999999431 1 23899999999999999999999999999999
Q ss_pred EcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcc
Q 036361 70 VAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAA 149 (485)
Q Consensus 70 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 149 (485)
+++|++||+++++||+++|++++||++..+.+++.++++.++++++|++.+..+.+.+.....+ ..+.++.+++...
T Consensus 137 ~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~~~~~~---~l~~ii~~~~~~~ 213 (696)
T PLN02387 137 FADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDISSQLE---TVKRVIYMDDEGV 213 (696)
T ss_pred EcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHHhhccC---CceEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999999999877776666554443 4567777765321
Q ss_pred cccCccCCCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh-CCCC
Q 036361 150 ASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW-AVPK 228 (485)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~-~~~~ 228 (485)
...... ..........++++...+...........++|+++|+|||||||.||||++||+++..++......+ .+.+
T Consensus 214 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~l~~~~~~~~~~~~~~~~ 291 (696)
T PLN02387 214 DSDSSL--SGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGNIVATVAGVMTVVPKLGK 291 (696)
T ss_pred hhhhhh--hccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHHHHHHHHHHHhhcCCCCC
Confidence 100000 0000011223444433322211122234578999999999999999999999999998887766554 5788
Q ss_pred CCEEEEecchhhHhHHHHHHHHHhhcceEeecccC------C--HHHHHHHHHhcCceeeecchHHHHHHhCCCC----C
Q 036361 229 QPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRF------D--ASAISDLIQKHNVTHMCGAPVVLNMISNSPD----F 296 (485)
Q Consensus 229 ~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~------~--~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~ 296 (485)
+|++++.+|++|.+++.....++..|+++.+.... + +..++..+++++||++.++|.+++.+.+... .
T Consensus 292 ~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~~~~vP~~l~~l~~~~~~~~~~ 371 (696)
T PLN02387 292 NDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTLMTAVPAILDRVRDGVRKKVDA 371 (696)
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcEEEehhHHHHHHHHHHHHHHhc
Confidence 99999999999999988766667777776654321 1 2345678999999999999999998864210 0
Q ss_pred --------------------------------------------CCC-CCCceEEeccCCCChhhhhhhh-ccCCeeeec
Q 036361 297 --------------------------------------------EPL-KTPVQILTAGAPPPAPVLSRTE-SMGFVVCHG 330 (485)
Q Consensus 297 --------------------------------------------~~l-~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~ 330 (485)
..+ +++|.+++||+++++++.+.++ .+++++++.
T Consensus 372 ~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGapl~~~~~~~~~~~~g~~v~~~ 451 (696)
T PLN02387 372 KGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGAPLSGDTQRFINICLGAPIGQG 451 (696)
T ss_pred ccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCCCCCHHHHHHHHHHcCCCeeEe
Confidence 001 5899999999999999988777 469999999
Q ss_pred cCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCC-CcccCCCceecEEEEecCcccccccCC
Q 036361 331 YGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETG-ESVKRDGVSLGEVVLRGGCVTVGYFKD 409 (485)
Q Consensus 331 Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~-~~~~~g~~~~Gel~v~~~~~~~gy~~~ 409 (485)
||+||+++.++.+... ....+++|.|.+++ +++|+|.+++ ..+.......|||+++||+++.||+++
T Consensus 452 YG~TEt~~~~~~~~~~-----------~~~~gsvG~p~p~~-evkivd~~~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~ 519 (696)
T PLN02387 452 YGLTETCAGATFSEWD-----------DTSVGRVGPPLPCC-YVKLVSWEEGGYLISDKPMPRGEIVIGGPSVTLGYFKN 519 (696)
T ss_pred echhhcccceeecCcc-----------cCCCCccCCCCCce-EEEEeeccccCcccCCCCCCCceEEeccCcccchhcCC
Confidence 9999998665543211 11246899999999 9999994443 332111114599999999999999999
Q ss_pred hhhhccccc--CCC--eeecCceEEEecCceEEEEccCCceEEe-CCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 410 KESTRRCIS--DNG--WFYTGDIAVMHVDGYVEIKDRSKDVIIS-GGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 410 ~~~~~~~~~--~~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~~-~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
++.+...|. ++| ||+|||+|++|+||+|++.||.+|+||. +|++|+|.+||++|.+||.|.+++|++.+
T Consensus 520 pe~T~~~f~~d~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~Ge~I~p~eIE~~l~~~p~V~~~~V~g~~ 593 (696)
T PLN02387 520 QEKTDEVYKVDERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALSVSPYVDNIMVHADP 593 (696)
T ss_pred HHHHhhhhccccCCCceeecCceEEECCCCcEEEEEcccceEECCCCeEEchHHHHHHHhcCCCeeEEEEEecC
Confidence 999999884 345 9999999999999999999999999996 79999999999999999999999999987
No 19
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=1.5e-63 Score=512.89 Aligned_cols=451 Identities=22% Similarity=0.267 Sum_probs=355.2
Q ss_pred hHHHHHHHh-hcCCCcEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 17 LGFLERAAT-AYSDCPSIVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 17 ~~~l~~~a~-~~p~~~a~~~~------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
+++|+++++ .+|+++|+++. .+++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 91 ~~~l~~~~~~~~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~a~lA~~~~Ga 170 (666)
T PLN02654 91 YNCLDRNVEAGNGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPIAMLACARIGA 170 (666)
T ss_pred HHHHHHhhccCCCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCC
Confidence 467777775 48999999873 26899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH---------HHHHHhccCCCC-CCCCeEEEecCCcccccCccCCCc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS---------LVLEALSLFPRD-TKRPHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~ 159 (485)
+++|+++..+.+++..+++.++++++|++..... .+.+........ .....++........... . ..
T Consensus 171 v~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~ 247 (666)
T PLN02654 171 VHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLAMKRE--D-TK 247 (666)
T ss_pred EEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccccccc--c-cc
Confidence 9999999999999999999999999999875322 122222111100 011122222211100000 0 00
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHH-HHHHHHHhCCCCCCEEEEecch
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFIL-TANALIDWAVPKQPVYLWTLPM 238 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~ 238 (485)
........|+++...... ........++++++++|||||||.||+|+++|.+++.. .......++++++|++++..|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 326 (666)
T PLN02654 248 WQEGRDVWWQDVVPNYPT-KCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDVYWCTADC 326 (666)
T ss_pred cccCCcccHHHHhhcCCC-CCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcEEEEcCCc
Confidence 000001112232221111 11112346789999999999999999999999998654 3445556788999999999999
Q ss_pred hhHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEecc
Q 036361 239 FHANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAG 309 (485)
Q Consensus 239 ~~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g 309 (485)
+|..+... ++++++.|+++++.+. +++..+++.|+++++|++.++|++++.|.+.. ...+++++|.++++|
T Consensus 327 ~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~Lr~i~~~G 406 (666)
T PLN02654 327 GWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDEYVTRHSRKSLRVLGSVG 406 (666)
T ss_pred hhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCccccccCChhheeEEEEec
Confidence 99998755 6789999999999863 58999999999999999999999999998764 234678999999999
Q ss_pred CCCChhhhhhhh-ccC---CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcc
Q 036361 310 APPPAPVLSRTE-SMG---FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESV 385 (485)
Q Consensus 310 ~~l~~~~~~~~~-~~~---~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~ 385 (485)
+++++++.+++. .++ +++.+.||+||+++..+...... .....+++|.|.+++ +++|+|+ +|+++
T Consensus 407 e~l~~~~~~~~~~~~g~~~~~i~~~yg~TE~g~~~~~~~~~~---------~~~~~gs~G~p~~g~-~v~i~d~-~g~~~ 475 (666)
T PLN02654 407 EPINPSAWRWFFNVVGDSRCPISDTWWQTETGGFMITPLPGA---------WPQKPGSATFPFFGV-QPVIVDE-KGKEI 475 (666)
T ss_pred CCCCHHHHHHHHHHhCCCCCceeccccccccCCeeeccCCCC---------CCCCCCccCCCCCCc-eEEEECC-CCCCC
Confidence 999999999887 555 78999999999987665332100 012346899999999 9999996 78888
Q ss_pred cCCCceecEEEEec--CcccccccCChhhhccccc--CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 386 KRDGVSLGEVVLRG--GCVTVGYFKDKESTRRCIS--DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 386 ~~g~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
+.+ +.|||++++ |+++.||+++++.+...+. .+|||+|||+|++|+||.++|+||.+|+||++|++|+|.|||+
T Consensus 476 ~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD~~~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~ 553 (666)
T PLN02654 476 EGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVES 553 (666)
T ss_pred CCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhhcCCCEEEeCceEEECCCCcEEEeeeccCeEEeCCEEECHHHHHH
Confidence 877 789999998 7899999999987765542 2789999999999999999999999999999999999999999
Q ss_pred HHhcCcCcceeEEEeccCCCCCC
Q 036361 462 VLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+|.+||+|.+++|++.+++..||
T Consensus 554 ~l~~~p~V~eaaVvg~~d~~~ge 576 (666)
T PLN02654 554 ALVSHPQCAEAAVVGIEHEVKGQ 576 (666)
T ss_pred HHHhCCCeeeEEEEeeEcCCCCe
Confidence 99999999999999999998886
No 20
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.7e-63 Score=498.64 Aligned_cols=433 Identities=24% Similarity=0.306 Sum_probs=363.6
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
+.++.++|.++++++|+++|+.+.++++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 42 ~~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 121 (537)
T PRK13382 42 GMGPTSGFAIAAQRCPDRPGLIDELGTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAANRIGADIL 121 (537)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEeCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHHHHcCcEEE
Confidence 36799999999999999999999889999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|+++..+.+++.++++.++++++|++.+....+........ ....++.+.+... ...++.+.
T Consensus 122 pl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~~~~~~ 183 (537)
T PRK13382 122 LLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALADCP---QATRIVAWTDEDH---------------DLTVEVLI 183 (537)
T ss_pred ecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhhcc---ccceEEEecCCcc---------------cccHHHHh
Confidence 99999999999999999999999999876665544432221 1222232222110 01112121
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
...... .....+++.++++|||||||.||+|+++|+++..+.......+.+..+++++...|++|.+++..++.++.
T Consensus 184 ~~~~~~---~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~ 260 (537)
T PRK13382 184 AAHAGQ---RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAAS 260 (537)
T ss_pred hccCcC---CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHh
Confidence 111111 11124578999999999999999999999998888777777778888999999999999999987888999
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC----CCCCCCCceEEeccCCCChhhhhhhh-ccCCee
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD----FEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVV 327 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i 327 (485)
.|+++++.+.+++..+++.|+++++|++.++|++++.|.+... ..+++++|.++++|+++++++.+.+. .++..+
T Consensus 261 ~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~~~~i 340 (537)
T PRK13382 261 LACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEVRNRYSGRSLRFAAASGSRMRPDVVIAFMDQFGDVI 340 (537)
T ss_pred cCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchhcccCCccceeEEEEcCCCCCHHHHHHHHHHcCCcE
Confidence 9999999888999999999999999999999999999987542 23456899999999999999999998 568899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++.++..+. ........++|.|.+++ .++|+|+ ++++++.| +.|||+++|++++.||+
T Consensus 341 ~~~YG~TE~~~~~~~~~----------~~~~~~~~~vG~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~gY~ 406 (537)
T PRK13382 341 YNNYNATEAGMIATATP----------ADLRAAPDTAGRPAEGT-EIRILDQ-DFREVPTG--EVGTIFVRNDTQFDGYT 406 (537)
T ss_pred EecccccccCcceecCh----------hHhccCCCCccccCcCc-EEEEECC-CCCCCCCC--CeeEEEEEcCCcccCcc
Confidence 99999999987655432 11112346899999998 9999996 78889988 88999999999999998
Q ss_pred CChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 408 KDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 408 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++.+. .+. ++||+|||++++++||++++.||.+|+||.+|++|++.+||+.|.++|+|.+++|++.+++..|+
T Consensus 407 --~~~~~-~~~-~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~~~v~~~~~~~~g~ 479 (537)
T PRK13382 407 --SGSTK-DFH-DGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAEAAVIGVDDEQYGQ 479 (537)
T ss_pred --ccchh-hcc-CCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEeeEEEEccCccccCC
Confidence 33333 344 78999999999999999999999999999999999999999999999999999999999988776
No 21
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=1.2e-62 Score=498.40 Aligned_cols=442 Identities=29% Similarity=0.439 Sum_probs=370.0
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
-.+...++.++|++.++.+|+++|+++.+ +++||.||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 19 ~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 19 GHWHDRTINDDLDACVASCPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCCcCCCHHHHHHHHHHHCCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHH
Confidence 34556789999999999999999999866 899999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccccCccCC
Q 036361 83 GVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTS 157 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 157 (485)
||+++|++++|++|..+.+++..+++.+++++++++.... +.+.+...... ....++.++....
T Consensus 99 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------- 167 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELP---ALRHVVVVGGDGA-------- 167 (547)
T ss_pred HHHhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCC---CcceEEEecCCCc--------
Confidence 9999999999999999999999999999999999987542 22222222222 3344444433210
Q ss_pred Ccccccccccccccccc-------CCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCC
Q 036361 158 PTVTVDFIDTYEGFVEE-------GDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQP 230 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~ 230 (485)
..+.++... ............++++++++|||||||.||+|+++|+++..++......+.+.+++
T Consensus 168 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~ 239 (547)
T PRK13295 168 --------DSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADD 239 (547)
T ss_pred --------cCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCC
Confidence 011111100 00001111224568999999999999999999999999998888877788899999
Q ss_pred EEEEecchhhHhHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEe
Q 036361 231 VYLWTLPMFHANGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILT 307 (485)
Q Consensus 231 ~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~ 307 (485)
++++..|++|..++.. ++.++..|+++++.+.+++..+++.++++++|.+.++|.++..+.... ....++++|.+++
T Consensus 240 ~~l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 319 (547)
T PRK13295 240 VILMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKESGRPVSSLRTFLC 319 (547)
T ss_pred eEEEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccccCCCcccceEEEE
Confidence 9999999999988765 788899999999998899999999999999999999999999998765 3356788999999
Q ss_pred ccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCccc
Q 036361 308 AGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVK 386 (485)
Q Consensus 308 ~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 386 (485)
+|+++++++.++++ .+++++++.||+||++.+++.+.... ......++|+|.+++ .++|+|+ ++++++
T Consensus 320 ~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~v~i~d~-~~~~~~ 388 (547)
T PRK13295 320 AGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTKLDDP---------DERASTTDGCPLPGV-EVRVVDA-DGAPLP 388 (547)
T ss_pred ecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeeccCCCc---------chhccCccccccCCc-EEEEECC-CCCCCC
Confidence 99999999999988 56999999999999987654432110 011235789999998 9999996 688899
Q ss_pred CCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcC
Q 036361 387 RDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSN 466 (485)
Q Consensus 387 ~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~ 466 (485)
.| +.|||+++|++++.||+++++.+... .+|||+|||+|+++++|.+++.||.+|+++++|.+++|.+||++|.++
T Consensus 389 ~g--~~Gel~v~g~~~~~gY~~~~~~t~~~--~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~IE~~l~~~ 464 (547)
T PRK13295 389 AG--QIGRLQVRGCSNFGGYLKRPQLNGTD--ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEIEALLYRH 464 (547)
T ss_pred CC--CCCeEEEEcCcccccccCCccccccC--CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHHHHHHHhC
Confidence 88 88999999999999999998887665 378999999999999999999999999999999999999999999999
Q ss_pred cCcceeEEEeccCCCCCC
Q 036361 467 TAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 467 ~~v~~~~v~~~~~~~~g~ 484 (485)
++|.+++|++.+++..|+
T Consensus 465 ~~v~~~~v~~~~~~~~g~ 482 (547)
T PRK13295 465 PAIAQVAIVAYPDERLGE 482 (547)
T ss_pred CCeeeEEEEeeecCCCCc
Confidence 999999999999988775
No 22
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=1.2e-62 Score=497.55 Aligned_cols=445 Identities=27% Similarity=0.393 Sum_probs=372.0
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
....++.+++.++++++|+++|+++. ++++||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 20 ~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~~~~~la~~~~G 99 (537)
T PLN02246 20 PNHLPLHDYCFERLSEFSDRPCLIDGATGRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEFVLAFLGASRRG 99 (537)
T ss_pred CCCCcHHHHHHHHHHhCCCCeEEEecCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHHcC
Confidence 44568999999999999999999875 4789999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++++|++|..+.+++..+++.++++++|++....+.+.+.... ....++.+++.. .....+
T Consensus 100 ~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-----~~~~~i~~~~~~--------------~~~~~~ 160 (537)
T PLN02246 100 AVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED-----DGVTVVTIDDPP--------------EGCLHF 160 (537)
T ss_pred EEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc-----CCceEEEeCCCC--------------CCceeH
Confidence 9999999999999999999999999999998777666544321 122344444321 001112
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHhHH
Q 036361 169 EGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHANGW 244 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~ 244 (485)
.+......... ......++++++++|||||||.||+|+++|+++..+...... .+.+..+|++++..|++|.+++
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~ 239 (537)
T PLN02246 161 SELTQADENEL-PEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSL 239 (537)
T ss_pred HHHhcCCCCCC-CCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHH
Confidence 22221111111 112345789999999999999999999999999877665433 4568899999999999999998
Q ss_pred HH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhh
Q 036361 245 GY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 245 ~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+... ...++++|.++++|+.+++++.+.++
T Consensus 240 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~ 319 (537)
T PLN02246 240 NSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVVEKYDLSSIRMVLSGAAPLGKELEDAFR 319 (537)
T ss_pred HHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCccccccCccceeEEEEecCcCCHHHHHHHH
Confidence 65 6678899999999999999999999999999999999999999987652 34567899999999999999999998
Q ss_pred c-c-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 S-M-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 ~-~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
+ + +..+.+.||+||++.+++.+..... +.......++|+|.++. +++|+|++++++++.| +.|||+++|
T Consensus 320 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~g 390 (537)
T PLN02246 320 AKLPNAVLGQGYGMTEAGPVLAMCLAFAK------EPFPVKSGSCGTVVRNA-ELKIVDPETGASLPRN--QPGEICIRG 390 (537)
T ss_pred HHcCCCeEeccccccccCcccccccccCC------CCccccCCccccccCCc-EEEEecCCCCCcCCCC--CceEEEEEC
Confidence 4 4 7789999999999876554321100 00111235789999998 9999998789999999 789999999
Q ss_pred CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 400 GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
++++.||+++++.+...+..++||+|||+|++++||.++++||.+|+||.+|++|+|.+||+.+.++|+|.+++|++.++
T Consensus 391 ~~~~~GY~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~~ 470 (537)
T PLN02246 391 PQIMKGYLNDPEATANTIDKDGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHPSIADAAVVPMKD 470 (537)
T ss_pred CchhccccCCchhhhhcccCCCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHHHHhCCCeeEEEEEcccC
Confidence 99999999999999888877899999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCC
Q 036361 480 KFWGE 484 (485)
Q Consensus 480 ~~~g~ 484 (485)
+..|+
T Consensus 471 ~~~~~ 475 (537)
T PLN02246 471 EVAGE 475 (537)
T ss_pred ccCCc
Confidence 87775
No 23
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-62 Score=497.09 Aligned_cols=459 Identities=27% Similarity=0.370 Sum_probs=380.1
Q ss_pred CCCCCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 6 PNHANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
+...+.++.|+.++|.++++.+|+++|+.+.++++||.||.+++.++|+.|.+. |+++||+|+++++|++++++++|||
T Consensus 2 ~~~~~~~~~tl~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~ 81 (546)
T PRK08314 2 PKSLTLPETSLFHNLEVSARRYPDKTAIVFYGRAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAYYAI 81 (546)
T ss_pred CCCCCCCCCCHHHHHHHHHHHcCCCcceeecCceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 455667788999999999999999999999999999999999999999999998 9999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccC--ccC------
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASST--TTT------ 156 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~------ 156 (485)
+++|++++|+++..+.+++..+++.++++++|++....+.+....... ....+++.......... ...
T Consensus 82 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (546)
T PRK08314 82 LRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL----RLRHVIVAQYSDYLPAEPEIAVPAWLRA 157 (546)
T ss_pred HHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc----CcceEEEecchhhcccccccCccccccc
Confidence 999999999999999999999999999999999988776665443322 12333332211000000 000
Q ss_pred ---CCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEE
Q 036361 157 ---SPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYL 233 (485)
Q Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~ 233 (485)
.......+...+++...... ........++++++++|||||||.||+|.++|++++.++......+.+..+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l 235 (546)
T PRK08314 158 EPPLQALAPGGVVAWKEALAAGL--APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPESVVL 235 (546)
T ss_pred ccccccccccccccHHHHhcccC--CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCceEE
Confidence 00000011222333322211 1112234678999999999999999999999999999888887788889999999
Q ss_pred EecchhhHhHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccC
Q 036361 234 WTLPMFHANGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGA 310 (485)
Q Consensus 234 ~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~ 310 (485)
+.+|++|.+|+.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.... ....++++|.+++||+
T Consensus 236 ~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~~~~~~~~~l~~~~~gG~ 315 (546)
T PRK08314 236 AVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLASPGLAERDLSSLRYIGGGGA 315 (546)
T ss_pred EEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhCCCccccCchhhheeeeccc
Confidence 9999999999865 678899999999999999999999999999999999999999888654 3345678999999999
Q ss_pred CCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCC
Q 036361 311 PPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDG 389 (485)
Q Consensus 311 ~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~ 389 (485)
++++++++++. .+++++++.||+||++......... .....++|.|.++. +++|+|++++++++.|
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-----------~~~~~~~G~~~~g~-~~~i~d~~~~~~~~~g- 382 (546)
T PRK08314 316 AMPEAVAERLKELTGLDYVEGYGLTETMAQTHSNPPD-----------RPKLQCLGIPTFGV-DARVIDPETLEELPPG- 382 (546)
T ss_pred cCCHHHHHHHHHHcCCcEEecccccccccceecCCCc-----------CCCCCccCcccCCe-EEEEEeCCCCcCCCCC-
Confidence 99999999988 5699999999999998665432210 01235789999998 9999998889999998
Q ss_pred ceecEEEEecCcccccccCChhhhcccccC---CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcC
Q 036361 390 VSLGEVVLRGGCVTVGYFKDKESTRRCISD---NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSN 466 (485)
Q Consensus 390 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~ 466 (485)
+.|||+++|++++.||+++++.+...|.. ++||+|||+|+++++|.+++.||.+|+++++|.+|+|.+||+++.++
T Consensus 383 -~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~i~~~ 461 (546)
T PRK08314 383 -EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGDLGRMDEEGYFFITDRLKRMINASGFKVWPAEVENLLYKH 461 (546)
T ss_pred -CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCCEEEEcCCCcEEEEecchhhEEeCCEEECHHHHHHHHHhC
Confidence 78999999999999999999988877642 35999999999999999999999999999999999999999999999
Q ss_pred cCcceeEEEeccCCCCCC
Q 036361 467 TAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 467 ~~v~~~~v~~~~~~~~g~ 484 (485)
|+|.+++|++.+++..|+
T Consensus 462 ~~v~~~~v~~~~~~~~~~ 479 (546)
T PRK08314 462 PAIQEACVIATPDPRRGE 479 (546)
T ss_pred cchheEEEEeCCCcccCc
Confidence 999999999999987765
No 24
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=5.1e-63 Score=508.55 Aligned_cols=446 Identities=25% Similarity=0.330 Sum_probs=359.1
Q ss_pred hhHHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 16 TLGFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
.++.|+++++.+|+++|+++.+ +++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|+
T Consensus 59 ~~~~l~~~~~~~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Ga 138 (625)
T TIGR02188 59 SYNCVDRHLEARPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACARIGA 138 (625)
T ss_pred HHHHHHHhhccCCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCC
Confidence 3567888888899999998743 5899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch---------HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS---------SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
+++|+++..+.+++.++++.++++++|+++... ..+.+.....+. ....+++++....... ...
T Consensus 139 v~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~-- 211 (625)
T TIGR02188 139 IHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPV--SVEHVLVVRRTGNPVP---WVE-- 211 (625)
T ss_pred EEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCC--CccEEEEEcCCCCCcC---ccc--
Confidence 999999999999999999999999999986532 233333332220 2334555443211000 000
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHH-HHHHhCCCCCCEEEEecchh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTAN-ALIDWAVPKQPVYLWTLPMF 239 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~ 239 (485)
.....++++....... .......++++++++|||||||.||+|+++|+++..+... ....+.+.++|++++..|++
T Consensus 212 --~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 288 (625)
T TIGR02188 212 --GRDVWWHDLMAKASAY-CEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCTADVG 288 (625)
T ss_pred --cccccHHHHHhhcCCC-CCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEECCCch
Confidence 0112233333222111 1122356789999999999999999999999998765443 33446788999999999999
Q ss_pred hHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccC
Q 036361 240 HANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGA 310 (485)
Q Consensus 240 ~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~ 310 (485)
|..+... ++.++..|+++++.+. +++..+++.++++++|++.++|++++.|.+.. ...+++++|.++++|+
T Consensus 289 ~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~G~ 368 (625)
T TIGR02188 289 WITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEWVKKHDLSSLRLLGSVGE 368 (625)
T ss_pred hhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcccccCCccceeEEEEecC
Confidence 9988754 7888999999998752 48999999999999999999999999998764 2346789999999999
Q ss_pred CCChhhhhhhh-cc---CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCccc
Q 036361 311 PPPAPVLSRTE-SM---GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVK 386 (485)
Q Consensus 311 ~l~~~~~~~~~-~~---~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 386 (485)
++++++.+++. .+ ++++++.||+||+++.++..... . .....+++|.|.+++ +++|+| ++|++++
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~--~-------~~~~~~~~G~p~~g~-~~~i~d-~~g~~~~ 437 (625)
T TIGR02188 369 PINPEAWMWYYKVVGKERCPIVDTWWQTETGGIMITPLPG--A-------TPTKPGSATLPFFGI-EPAVVD-EEGNPVE 437 (625)
T ss_pred CCCHHHHHHHHHHcCCCCCceEecccccccCCceeecCCC--C-------CCcCCCcccCCcCCc-eEEEEC-CCCCCCC
Confidence 99999998887 44 37899999999998775543211 0 012346789999999 999999 4888888
Q ss_pred -CCCceecEEEEec--CcccccccCChhhhccccc--CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 387 -RDGVSLGEVVLRG--GCVTVGYFKDKESTRRCIS--DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 387 -~g~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
+| +.|||++++ |+++.||+++++.+...+. .+|||+|||+|++|+||.++++||.+|+||++|++|+|.+||+
T Consensus 438 ~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~ 515 (625)
T TIGR02188 438 GPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYFTGDGARRDKDGYIWITGRVDDVINVSGHRLGTAEIES 515 (625)
T ss_pred CCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEECCceEEEcCCCcEEEEecccCEEEeCCEEECHHHHHH
Confidence 77 889999999 6899999999987666543 2789999999999999999999999999999999999999999
Q ss_pred HHhcCcCcceeEEEeccCCCCCC
Q 036361 462 VLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+|.+||+|.+|+|++.+++..||
T Consensus 516 ~l~~~p~V~e~~vvg~~~~~~g~ 538 (625)
T TIGR02188 516 ALVSHPAVAEAAVVGIPDDIKGQ 538 (625)
T ss_pred HHHhCCCcceEEEEeeEcCCCCe
Confidence 99999999999999999998776
No 25
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.3e-62 Score=492.12 Aligned_cols=449 Identities=32% Similarity=0.502 Sum_probs=382.6
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+...++.+.|++.++.+|+++|+.+.++++||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~la~~~~G~~ 81 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFGDQRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAALGALKAGAV 81 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeCCCceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeE
Confidence 44578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|+++..+.+++..+++.+++++++++............... ....++........... .....|.+
T Consensus 82 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~ 149 (513)
T PRK07656 82 VVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSATTRLP---ALEHVVICETEEDDPHT---------EKMKTFTD 149 (513)
T ss_pred EEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHHhccC---CccEEEEEcCcccccCc---------cccccHHH
Confidence 9999999999999999999999999999877666555443322 33444444332211000 01123333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWG 249 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 249 (485)
+...... .....+..++++++++|||||||.||+|.++|.++...+......+.+.+++++++..|++|.+++.. ++.
T Consensus 150 ~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (513)
T PRK07656 150 FLAAGDP-AERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAGVNA 228 (513)
T ss_pred HHhcCCC-CCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHHHHH
Confidence 3332221 11223456789999999999999999999999999988888888888999999999999999999865 788
Q ss_pred HHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhh-ccCC-
Q 036361 250 MAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTE-SMGF- 325 (485)
Q Consensus 250 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~- 325 (485)
++..|+++++.+.+++..+++.++++++|++.++|++++.+.+... ...++++|.++++|+++++++++.++ .++.
T Consensus 229 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~ 308 (513)
T PRK07656 229 PLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRSAEDLSSLRLAVTGAASMPVALLERFESELGVD 308 (513)
T ss_pred HHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcCCCCccceeeEEecCCCCCHHHHHHHHHHcCCC
Confidence 8999999999888999999999999999999999999999988763 33678999999999999999999998 6688
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 405 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~g 405 (485)
.+++.||+||+++++..+....... ....++|.|.+++ +++|+|+ ++++++.| +.|||+++|+.++.|
T Consensus 309 ~~~~~YG~tE~~~~~~~~~~~~~~~--------~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~g 376 (513)
T PRK07656 309 IVLTGYGLSEASGVTTFNRLDDDRK--------TVAGTIGTAIAGV-ENKIVNE-LGEEVPVG--EVGELLVRGPNVMKG 376 (513)
T ss_pred ceEeEEccccCCCceeecCcccccc--------ccCCCccccCCCc-EEEEECC-CCCCCCCC--CceEEEEEcchhhhh
Confidence 8999999999988777654222110 1135789999998 9999996 78999988 789999999999999
Q ss_pred ccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 406 YFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 406 y~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
|++++..+...+..++||+|||+|+++++|.++++||.+|+++++|.++++.+||+.|.++++|.+++|++.+++..|+
T Consensus 377 y~~~~~~~~~~~~~~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~i~~~~v~~~~~~~~g~ 455 (513)
T PRK07656 377 YYDDPEATAAAIDADGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVLYEHPAVAEAAVIGVPDERLGE 455 (513)
T ss_pred hcCCHHHHhhhhccCCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHHHhCCCeeEEEEEecCCcccCc
Confidence 9999999888887789999999999999999999999999999999999999999999999999999999999887765
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-62 Score=504.71 Aligned_cols=444 Identities=24% Similarity=0.322 Sum_probs=358.1
Q ss_pred hHHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 17 LGFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.++|+++++.+|+++|+++.+ +++||+||+++++++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 70 ~~~l~~~~~~~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 149 (637)
T PRK00174 70 YNCLDRHLKTRGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACARIGAV 149 (637)
T ss_pred HHHHHHhhccCCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCE
Confidence 467888888999999999743 47999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcch---------HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHS---------SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
++|+++..+.+++.++++.++++++|+++... +.+.+.....+ ....+++.+.........
T Consensus 150 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------- 219 (637)
T PRK00174 150 HSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCP---SVEKVIVVRRTGGDVDWV------- 219 (637)
T ss_pred EEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCC---CccEEEEEcCCCCCcCcC-------
Confidence 99999999999999999999999999976532 22333333222 344555554321100000
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHH-HHHHhCCCCCCEEEEecchhh
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTAN-ALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~ 240 (485)
......+.++...... ........++++++++|||||||.||+|+++|++++.++.. ....+.+.++|++++..|++|
T Consensus 220 ~~~~~~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 298 (637)
T PRK00174 220 EGRDLWWHELVAGASD-ECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADVGW 298 (637)
T ss_pred CCCcccHHHHHhhcCC-CCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCchH
Confidence 0011223333322111 11122346789999999999999999999999998765443 334467888999999999999
Q ss_pred HhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCC
Q 036361 241 ANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 241 ~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~ 311 (485)
..+... ++.++..|+++++.+. +++..+++.|+++++|++.++|++++.|.+.. ....++++|.++++|++
T Consensus 299 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~Ge~ 378 (637)
T PRK00174 299 VTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEHPKKYDLSSLRLLGSVGEP 378 (637)
T ss_pred hhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcccccCCccceeEEEEeCCC
Confidence 988754 7888999999998752 47999999999999999999999999998764 23467899999999999
Q ss_pred CChhhhhhhh-ccC---CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccC
Q 036361 312 PPAPVLSRTE-SMG---FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKR 387 (485)
Q Consensus 312 l~~~~~~~~~-~~~---~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~ 387 (485)
+++++.+++. .++ +++++.||+||+++.++...... .....+++|.|.+++ +++|+|+ ++++++.
T Consensus 379 l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~~vG~p~~g~-~~~i~d~-~g~~~~~ 447 (637)
T PRK00174 379 INPEAWEWYYKVVGGERCPIVDTWWQTETGGIMITPLPGA---------TPLKPGSATRPLPGI-QPAVVDE-EGNPLEG 447 (637)
T ss_pred CCHHHHHHHHHHhCCCCCceEecccccccCCceEecCCCC---------CCcCCCcccCCCCCc-eEEEECC-CCCCCCC
Confidence 9999998887 443 78999999999987655322110 011235789999998 9999995 7899998
Q ss_pred CCceecEEEEec--CcccccccCChhhhccccc--CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHH
Q 036361 388 DGVSLGEVVLRG--GCVTVGYFKDKESTRRCIS--DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVL 463 (485)
Q Consensus 388 g~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l 463 (485)
| +.|||+++| |+++.||+++++.+...+. .+|||+|||+|++|+||+++++||.+|+||++|++|+|.+||++|
T Consensus 448 g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l 525 (637)
T PRK00174 448 G--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESAL 525 (637)
T ss_pred C--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEEECHHHHHHHH
Confidence 8 789999999 6999999999987766542 378999999999999999999999999999999999999999999
Q ss_pred hcCcCcceeEEEeccCCCCCC
Q 036361 464 YSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.++|+|.+|+|++.+++..||
T Consensus 526 ~~~~~V~~~~Vvg~~~~~~g~ 546 (637)
T PRK00174 526 VAHPKVAEAAVVGRPDDIKGQ 546 (637)
T ss_pred HhCCCcceEEEEeeEcCCCCe
Confidence 999999999999999988776
No 27
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.7e-62 Score=491.36 Aligned_cols=428 Identities=26% Similarity=0.425 Sum_probs=366.2
Q ss_pred chhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 15 TTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
.+.+.|+++|+.+|+++|+.+.++++||.||.++++++|++|++ .|+++|++|+++++|++++++++|||+++|++++|
T Consensus 3 ~~~~~~~~~a~~~p~~~a~~~~~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~ 82 (496)
T PRK06839 3 GIAYWIEKRAYLHPDRIAIITEEEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFAIAKVECIAVP 82 (496)
T ss_pred cHHHHHHHHHHHCCCCeEEEECCceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 47789999999999999999999999999999999999999986 79999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++..+++.+++++++++++..+.+.+..... ....++.+.+.. +...
T Consensus 83 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---------------------~~~~ 137 (496)
T PRK06839 83 LNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQKVS----YVQRVISITSLK---------------------EIED 137 (496)
T ss_pred cCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhhcc----CcceEEEecchH---------------------hhhc
Confidence 999999999999999999999999887665544432211 122333322110 0111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAA 252 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~ 252 (485)
... ....+..++++++++|||||||.||+|.++|+++..++......+.+..++++++.+|++|.+++.. ++.++.
T Consensus 138 ~~~---~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~ 214 (496)
T PRK06839 138 RKI---DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLF 214 (496)
T ss_pred cCC---CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHh
Confidence 100 0112244578999999999999999999999999887777777778889999999999999998866 577889
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhhccCCeeeec
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHG 330 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~ 330 (485)
.|+++++.+.+++..+++.++++++|++.++|++++.+.+.. ....++++|.+++||+++++.+.+.+++.++++.+.
T Consensus 215 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~g~~~~~~ 294 (496)
T PRK06839 215 AGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFETTNLQSVRWFYNGGAPCPEELMREFIDRGFLFGQG 294 (496)
T ss_pred cCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccccCCCcccceEEECCCCCCHHHHHHHHHhCCeeEee
Confidence 999999888899999999999999999999999999998765 334678999999999999999999998779999999
Q ss_pred cCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCCh
Q 036361 331 YGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDK 410 (485)
Q Consensus 331 Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~ 410 (485)
||+||++.+++..... .......++|.|.++. .++|+|+ +++.+++| +.|||+++|++++.||++++
T Consensus 295 YG~tE~~~~~~~~~~~---------~~~~~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~ 361 (496)
T PRK06839 295 FGMTETSPTVFMLSEE---------DARRKVGSIGKPVLFC-DYELIDE-NKNKVEVG--EVGELLIRGPNVMKEYWNRP 361 (496)
T ss_pred ccCCCCCcceEecccc---------cccccCCCCcccCCCc-eEEEECC-CcCCCCCC--CceEEEEECCCcchhhcCCh
Confidence 9999998755443211 1112346889999998 9999997 66778888 88999999999999999999
Q ss_pred hhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 411 ESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 411 ~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+.+...+. +|||+|||+++++++|.+++.||.+|+|+.+|.+|+|.+||++|.++|+|.+++|++.+++..|+
T Consensus 362 ~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 434 (496)
T PRK06839 362 DATEETIQ-DGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYEVAVVGRQHVKWGE 434 (496)
T ss_pred HHHHHHHc-CCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 98887776 89999999999999999999999999999999999999999999999999999999999998876
No 28
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=4.9e-62 Score=495.58 Aligned_cols=479 Identities=49% Similarity=0.854 Sum_probs=375.9
Q ss_pred ccccCCCCCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 036361 2 ELLLPNHANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 81 (485)
Q Consensus 2 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~ 81 (485)
+-|.++.++..+.++..++++.++.+|+++|+.+.+.++||+||.++++++|.+|.+.|+++||+|+++++|++++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~ 87 (567)
T PLN02479 8 DDLPKNAANYTALTPLWFLERAAVVHPTRKSVVHGSVRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAH 87 (567)
T ss_pred ccccCccccccccCHHHHHHHHHhhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHH
Confidence 34667777788888999999999999999999999899999999999999999999999999999999999999999999
Q ss_pred HhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCC----CCCCCeEEEecCCcccccCccCC
Q 036361 82 FGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPR----DTKRPHLVLVDDDAAASSTTTTS 157 (485)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~ 157 (485)
+||+++|++++|+++..+.+++.++++.++++++|+++...+...+....... ....+.++++++..........
T Consensus 88 la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (567)
T PLN02479 88 FGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQY- 166 (567)
T ss_pred HHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccc-
Confidence 99999999999999999999999999999999999998776655444332110 0012334444332110000000
Q ss_pred CccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecc
Q 036361 158 PTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLP 237 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p 237 (485)
........+.+++....+..........+++++++|||||||.||+|++||+++...+......+.+..++++++..|
T Consensus 167 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~p 244 (567)
T PLN02479 167 --ALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWTLP 244 (567)
T ss_pred --ccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEecc
Confidence 000112233333333222211112233457788999999999999999999998776666666677888999999999
Q ss_pred hhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC---CCCCCCceEEeccCCCCh
Q 036361 238 MFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF---EPLKTPVQILTAGAPPPA 314 (485)
Q Consensus 238 ~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~---~~l~~lr~i~~~g~~l~~ 314 (485)
++|.+++...+.....++..+++..+++..+++.++++++|++..+|+++..|.+.... ..+++++.++++|+++++
T Consensus 245 ~~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~~~~~G~~~~~ 324 (567)
T PLN02479 245 MFHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSETILPLPRVVHVMTAGAAPPP 324 (567)
T ss_pred hhhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcccccccceeEEEEcCCCCCH
Confidence 99999987655444445555666778999999999999999999999999999876421 256889999999999999
Q ss_pred hhhhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecE
Q 036361 315 PVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGE 394 (485)
Q Consensus 315 ~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Ge 394 (485)
++.+++.+.+.++++.||+||+++.++.+...+.+...+...........|.+.++...++|+|++++.+++.++.+.||
T Consensus 325 ~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GE 404 (567)
T PLN02479 325 SVLFAMSEKGFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGE 404 (567)
T ss_pred HHHHHHHhcCCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceE
Confidence 99999887789999999999997655444322222211111111222456777777644889997778888765336799
Q ss_pred EEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEE
Q 036361 395 VVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAV 474 (485)
Q Consensus 395 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v 474 (485)
|+++|++++.||+++++.+...|. ++||+|||+|+++++|+++++||.+|+|+++|.+|++.+||.+|.++|.|.+++|
T Consensus 405 l~v~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v 483 (567)
T PLN02479 405 IVMRGNMVMKGYLKNPKANEEAFA-NGWFHSGDLGVKHPDGYIEIKDRSKDIIISGGENISSLEVENVVYTHPAVLEASV 483 (567)
T ss_pred EEEeccchhhhhhcCcccccchhc-CCceecceeEEEcCCccEEEeccccceEEeCCEEEcHHHHHHHHHhCcccceeeE
Confidence 999999999999999999999887 8999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCC
Q 036361 475 VARPDKFWGE 484 (485)
Q Consensus 475 ~~~~~~~~g~ 484 (485)
++.+++..|+
T Consensus 484 ~~~~~~~~~~ 493 (567)
T PLN02479 484 VARPDERWGE 493 (567)
T ss_pred EeccchhcCc
Confidence 9998876554
No 29
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=9.6e-63 Score=500.03 Aligned_cols=440 Identities=25% Similarity=0.354 Sum_probs=356.9
Q ss_pred chhHHHHHHHhhcCCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 15 TTLGFLERAATAYSDCPSIVYNN--TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
++.+.+... +.+|+++|+++.. .++||+||.++++++|++|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 41 ~~~~~l~~~-~~~~~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~ 119 (560)
T PLN02574 41 DAVSFIFSH-HNHNGDTALIDSSTGFSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIV 119 (560)
T ss_pred CHHHHHhcC-cccCCCCEEEECCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchHHHHHHHHHHhCeEE
Confidence 443333333 5789999999864 379999999999999999999 999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|++|..+.+++.++++.++++++|++.+..+.+... ...++.+++........ .....+..+
T Consensus 120 v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 182 (560)
T PLN02574 120 TTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL---------GVPVIGVPENYDFDSKR--------IEFPKFYEL 182 (560)
T ss_pred eCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc---------CCcEEecCcccccccCc--------cCcccHHHH
Confidence 9999999999999999999999999987655544321 11223222211000000 011122222
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH----hC-CCCCCEEEEecchhhHhHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID----WA-VPKQPVYLWTLPMFHANGWGY 246 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~----~~-~~~~~~~~~~~p~~~~~g~~~ 246 (485)
....... .......++++++++|||||||.||+|++||+++..++...... +. ...+++++..+|++|.+|+..
T Consensus 183 ~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~ 261 (560)
T PLN02574 183 IKEDFDF-VPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSL 261 (560)
T ss_pred hhcCCcc-cccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHH
Confidence 2222111 11223456899999999999999999999999998877655431 22 235688899999999999876
Q ss_pred -HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC---CCCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 247 -TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP---DFEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 247 -~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---~~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.. ....++++|.++++|++++++..+++.
T Consensus 262 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~ 341 (560)
T PLN02574 262 FVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGVCGEVLKSLKQVSCGAAPLSGKFIQDFVQ 341 (560)
T ss_pred HHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccccccCccccceEEEEecccCCHHHHHHHHH
Confidence 566778899999999999999999999999999999999999998765 235678999999999999999999988
Q ss_pred cc-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC
Q 036361 322 SM-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG 400 (485)
Q Consensus 322 ~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~ 400 (485)
.+ ++.+++.||+||++.+++...... ......++|.+.+++ +++|+|+++++++++| +.|||+++|+
T Consensus 342 ~~~~~~v~~~YG~tE~~~~~~~~~~~~---------~~~~~~~vG~~~~~~-~v~i~d~~~g~~~~~g--~~Gei~v~g~ 409 (560)
T PLN02574 342 TLPHVDFIQGYGMTESTAVGTRGFNTE---------KLSKYSSVGLLAPNM-QAKVVDWSTGCLLPPG--NCGELWIQGP 409 (560)
T ss_pred HCCCCcEEecccccccCceeecCCCcc---------ccCCCCceeeeCCCc-EEEEEeCCCCcCCCCC--CCeEEEEECc
Confidence 55 789999999999986544321110 011235889999998 9999998889999999 8899999999
Q ss_pred cccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 401 CVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
+++.||+++++.+...|..+|||+|||+|++++||.++++||.+|+||++|++|++.+||++|.+||+|.+++|++.+++
T Consensus 410 ~~~~GY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~~~v~~~~~~ 489 (560)
T PLN02574 410 GVMKGYLNNPKATQSTIDKDGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIIDAAVTAVPDK 489 (560)
T ss_pred chhhhhcCChhHhhhhccCCCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcceEEEEccccC
Confidence 99999999999998888779999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCC
Q 036361 481 FWGET 485 (485)
Q Consensus 481 ~~g~~ 485 (485)
..|++
T Consensus 490 ~~g~~ 494 (560)
T PLN02574 490 ECGEI 494 (560)
T ss_pred CCCcc
Confidence 87763
No 30
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.2e-62 Score=488.23 Aligned_cols=421 Identities=28% Similarity=0.434 Sum_probs=363.2
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
+++.++|+++++.+||++|+.+.++.+||+||+++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (483)
T PRK03640 2 ETMPNWLKQRAFLTPDRTAIEFEEKKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHALQQLGAVAVL 81 (483)
T ss_pred CcHHHHHHHHHHhCCCceEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhCCcEEEe
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++..+++.+++++++++........... . +. ++++..
T Consensus 82 i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~----------~-~~------------------------~~~~~~ 126 (483)
T PRK03640 82 LNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGI----------S-VK------------------------FAELMN 126 (483)
T ss_pred cCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhc----------c-cc------------------------HHHHhh
Confidence 999999999999999999999999876544322110 0 00 011111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAV 253 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 253 (485)
.............++++++++|||||||.||+|.++|+++...+......+++.++|++++.+|++|.+++..++.++..
T Consensus 127 ~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~ 206 (483)
T PRK03640 127 GPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLSILMRSVIY 206 (483)
T ss_pred cccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHHHHHHHHhc
Confidence 11111111123456799999999999999999999999998888777777889999999999999999999888899999
Q ss_pred cceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC-CCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccC
Q 036361 254 GATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD-FEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYG 332 (485)
Q Consensus 254 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg 332 (485)
|+++++.+.+++..+++.++++++|++.++|+++..|.+... .....++|.++++|+++++.+++.++++++++++.||
T Consensus 207 G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~~~~YG 286 (483)
T PRK03640 207 GMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGGGPAPKPLLEQCKEKGIPVYQSYG 286 (483)
T ss_pred CCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcCCCCCHHHHHHHHHhCCCeeeeec
Confidence 999999999999999999999999999999999999986542 2344689999999999999999998888999999999
Q ss_pred CccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhh
Q 036361 333 LTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKES 412 (485)
Q Consensus 333 ~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~ 412 (485)
+||++..+...... ......+++|.|.+++ +++|.++ +++++.| +.|||+++|++++.||+++++.
T Consensus 287 ~tE~~~~~~~~~~~---------~~~~~~~~vG~p~~~~-~~~i~~~--~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~ 352 (483)
T PRK03640 287 MTETASQIVTLSPE---------DALTKLGSAGKPLFPC-ELKIEKD--GVVVPPF--EEGEIVVKGPNVTKGYLNREDA 352 (483)
T ss_pred cCcccccccccCcc---------cccccCCCcccccCCc-EEEEecC--CCcCCCC--CceEEEEECcchhhhhcCCHHH
Confidence 99997654433211 1122346899999998 9999885 4788888 7899999999999999999999
Q ss_pred hcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 413 TRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 413 ~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+...|. ++||+|||++++++||.+++.||.+|++|.+|.++++.+||+.+.++++|.+++|++.+++..|+
T Consensus 353 ~~~~~~-~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~~~v~~~~~~~~~~ 423 (483)
T PRK03640 353 TRETFQ-DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAEAGVVGVPDDKWGQ 423 (483)
T ss_pred HHHHHh-cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeEEEEEeCCCcccCC
Confidence 888886 89999999999999999999999999999999999999999999999999999999999887664
No 31
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=1.8e-61 Score=488.52 Aligned_cols=442 Identities=28% Similarity=0.360 Sum_probs=369.1
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
.+....++.++|+++++.+|+++|+++.+.++||+||.+++.++|+.|.+.|+++|++|+++++|++++++++|||+++|
T Consensus 16 ~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~~~~lA~~~~G 95 (542)
T PRK06155 16 LPPSERTLPAMLARQAERYPDRPLLVFGGTRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFLDVFLGCAWLG 95 (542)
T ss_pred CCccccCHHHHHHHHHHHCCCCeEEEeCCccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHhC
Confidence 34567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++++|+++.++.+++..+++.+++++++++.+..+.+.+...... ....++.++..... .. ...+
T Consensus 96 ~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----~~--------~~~~ 160 (542)
T PRK06155 96 AIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPGDL---PLPAVWLLDAPASV----SV--------PAGW 160 (542)
T ss_pred CEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccccc---CcceEEEecCcccc----cc--------cccc
Confidence 999999999999999999999999999999877766654433221 23445555433210 00 0000
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHH
Q 036361 169 EGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTW 248 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~ 248 (485)
..................++++++++|||||||.||+|.++|+++..........+.+++++++++..|++|..++..++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~~~~ 240 (542)
T PRK06155 161 STAPLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALNAFF 240 (542)
T ss_pred chhhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHHHHH
Confidence 00000000011111234568999999999999999999999999988877777778899999999999999999998889
Q ss_pred HHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhh-ccCC
Q 036361 249 GMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTE-SMGF 325 (485)
Q Consensus 249 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~ 325 (485)
.++..|+++++.+.+++..+++.|+++++|++.++|+++..|.+... ....+++|.++.+| +++.+.+.++ .+++
T Consensus 241 ~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~g~--~~~~~~~~~~~~~~~ 318 (542)
T PRK06155 241 QALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPARESDRAHRVRVALGPG--VPAALHAAFRERFGV 318 (542)
T ss_pred HHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCccccccCceEEEEEcC--CCHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999987662 23456777766555 5788888887 5699
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC---cc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG---CV 402 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~---~~ 402 (485)
++++.||+||++.++..+.. ......+|.+.+++ +++|+|+ ++++++.| +.|||+++|+ ++
T Consensus 319 ~v~~~YG~tE~~~~~~~~~~------------~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gei~v~~~~~~~~ 382 (542)
T PRK06155 319 DLLDGYGSTETNFVIAVTHG------------SQRPGSMGRLAPGF-EARVVDE-HDQELPDG--EPGELLLRADEPFAF 382 (542)
T ss_pred CEEeeecccccCccccCCCC------------CCCCCCcCccCCCc-eEEEECC-CCCCCCCC--CceEEEEecCCcccc
Confidence 99999999999876554311 11235789999998 9999996 68899998 7899999998 69
Q ss_pred cccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCC
Q 036361 403 TVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFW 482 (485)
Q Consensus 403 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~ 482 (485)
+.||+++++.+...|. ++||+|||+|++++||.++++||.+|+|+++|++++|.+||+++.++|+|.+++|++.+++..
T Consensus 383 ~~GY~~~~~~~~~~~~-~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~~v~~~~~ 461 (542)
T PRK06155 383 ATGYFGMPEKTVEAWR-NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVLLSHPAVAAAAVFPVPSELG 461 (542)
T ss_pred chhhcCCHHHHHHhhc-CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHHHhCCCeeEEEEEeeccccc
Confidence 9999999998888776 899999999999999999999999999999999999999999999999999999999998776
Q ss_pred CC
Q 036361 483 GE 484 (485)
Q Consensus 483 g~ 484 (485)
|+
T Consensus 462 ~~ 463 (542)
T PRK06155 462 ED 463 (542)
T ss_pred Cc
Confidence 54
No 32
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=2.5e-62 Score=497.26 Aligned_cols=444 Identities=21% Similarity=0.261 Sum_probs=349.8
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCe----------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNT----------TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 80 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~----------~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~ 80 (485)
+...++.++|++.++++|+++|+++.+. ++||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 3 ~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 3 ASMANIARHLPRAAQERPDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhhhhHHHHHHHHHHhCCCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 4567888999999999999999998654 899999999999999999999999999999999999999999
Q ss_pred HHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 81 QFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
+|||+++|++++|++|..+.+++.++++.++++++|++.+. .. .+....... .....++.++....
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~-~~-~~~~~~~~~-~~~~~~i~~~~~~~----------- 148 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKA-HL-ARRLFGWGK-PSVRRLVTVGGRLL----------- 148 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHH-HH-HHHHhccCc-cchhheeccccccc-----------
Confidence 99999999999999999999999999999999999997521 11 111111000 01222333222100
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
.....+.++...............++++++++|||||||.||+|.++|+++..++......+++.++++.++.+|++|
T Consensus 149 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~ 226 (552)
T PRK09274 149 --WGGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFA 226 (552)
T ss_pred --cCCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHH
Confidence 001112222211111111112345689999999999999999999999999998888888888999999999999987
Q ss_pred HhHHHHHHHHHhhcceEeecc-------cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCC
Q 036361 241 ANGWGYTWGMAAVGATNICLR-------RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~-------~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~ 311 (485)
.+++ ..|+++++.+ .+++..+++.|+++++|+++++|++++.|.+.. ....++++|.+++||++
T Consensus 227 ~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~ 299 (552)
T PRK09274 227 LFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEANGIKLPSLRRVISAGAP 299 (552)
T ss_pred hhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhcCCCCchhhEEEecCCc
Confidence 6543 3477766653 468999999999999999999999999998765 33478899999999999
Q ss_pred CChhhhhhhhc-c--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCC--------
Q 036361 312 PPAPVLSRTES-M--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPE-------- 380 (485)
Q Consensus 312 l~~~~~~~~~~-~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~-------- 380 (485)
+++++.+++++ + ++++++.||+||++++++...... ..............++|+|.+++ +++|+|++
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~-~~~~~~~~~~~~~~~vG~~~~~~-~~~ivd~~~~~~~~~~ 377 (552)
T PRK09274 300 VPIAVIERFRAMLPPDAEILTPYGATEALPISSIESREI-LFATRAATDNGAGICVGRPVDGV-EVRIIAISDAPIPEWD 377 (552)
T ss_pred CCHHHHHHHHHHcCCCceEEccccccccceeEeecchhh-hccccccccCCCCcccCccCCCc-eEEEEecccccccccc
Confidence 99999999984 5 579999999999987654332110 00000000001123689999998 99999853
Q ss_pred CCCcccCCCceecEEEEecCcccccccCChhhhccccc--CCC--eeecCceEEEecCceEEEEccCCceEEeCCeeech
Q 036361 381 TGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS--DNG--WFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICS 456 (485)
Q Consensus 381 ~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~ 456 (485)
+++++++| +.|||+++|++++.||+++++.+...+. .+| ||+|||+|++|+||+|+++||.+|+|+++|.+|+|
T Consensus 378 ~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p 455 (552)
T PRK09274 378 DALRLATG--EIGEIVVAGPMVTRSYYNRPEATRLAKIPDGQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTLYT 455 (552)
T ss_pred ccccCCCC--CeeEEEEecCcccccccCChHHhhhhhcccCCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEECc
Confidence 46778888 8899999999999999999998887652 356 99999999999999999999999999999999999
Q ss_pred HHHHHHHhcCcCcceeEEEeccCCC
Q 036361 457 AEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 457 ~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
.+||++|.+||+|.+|+|++.+++.
T Consensus 456 ~eIE~~l~~~p~V~~~~v~~~~~~~ 480 (552)
T PRK09274 456 IPCERIFNTHPGVKRSALVGVGVPG 480 (552)
T ss_pred HHHHHHHHhCcccceeEEEEeCCCC
Confidence 9999999999999999999998764
No 33
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-61 Score=489.86 Aligned_cols=471 Identities=50% Similarity=0.904 Sum_probs=377.9
Q ss_pred cccCCCCCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 3 LLLPNHANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 3 ~~~~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
-+..+.....++++.+.|++.++.+|+++|+.+.+..+||+||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 86 (545)
T PRK08162 7 GLDRNAANYVPLTPLSFLERAAEVYPDRPAVIHGDRRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHF 86 (545)
T ss_pred ccCccccccccCCHHHHHHHHHHHCCCCeEEEECCeEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHH
Confidence 34556666667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccc
Q 036361 83 GVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTV 162 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 162 (485)
||+++|++++|+++..+.+++..+++.++++.++++.+..+.+.+.....+ ....+.++......... ..
T Consensus 87 A~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~------~~ 156 (545)
T PRK08162 87 GVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALLP----GPKPLVIDVDDPEYPGG------RF 156 (545)
T ss_pred HHHHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhCC----CCceEEEecCccccccC------CC
Confidence 999999999999999999999999999999999999988777665543332 12223332221100000 00
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHh
Q 036361 163 DFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
....+++++............+...+++++++|||||||.||+|+++|+++..++......+.+..++++++.+|++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 236 (545)
T PRK08162 157 IGALDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCN 236 (545)
T ss_pred cccccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhh
Confidence 11123344443332222222233456899999999999999999999999877776666667788889999999999999
Q ss_pred HHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhh
Q 036361 243 GWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
++...+...+.|++.++.+.+++..+++.++++++|++.++|++++.|.+... ...+.+.+.++++|+.+++...+.+
T Consensus 237 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 316 (545)
T PRK08162 237 GWCFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWRAGIDHPVHAMVAGAAPPAAVIAKM 316 (545)
T ss_pred hHHHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccccCCccceEEEECCCCCCHHHHHHH
Confidence 98765555566777777778899999999999999999999999999987652 2345567778899999999999988
Q ss_pred hccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC
Q 036361 321 ESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG 400 (485)
Q Consensus 321 ~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~ 400 (485)
+++++++++.||+||+++.+..+...+.+...+..........+|.+.+....++|+|++++++++.++.+.|||+++|+
T Consensus 317 ~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~ 396 (545)
T PRK08162 317 EEIGFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGN 396 (545)
T ss_pred HHhCCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecC
Confidence 87799999999999997665554332222222222222233456766554447889998788888764335799999999
Q ss_pred cccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 401 CVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
.++.||+++++.+...|. ++||+|||+|++|+||.++++||.+|++|++|.+++|.+||.+|.++|+|.+++|++.+++
T Consensus 397 ~~~~gY~~~~~~~~~~~~-~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~ 475 (545)
T PRK08162 397 IVMKGYLKNPKATEEAFA-GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEVEDVLYRHPAVLVAAVVAKPDP 475 (545)
T ss_pred cchhhhcCChhhhHHHhh-CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHHHHHHHhCCcccEEEEEeeecc
Confidence 999999999999998887 8899999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCC
Q 036361 481 FWGE 484 (485)
Q Consensus 481 ~~g~ 484 (485)
..|+
T Consensus 476 ~~~~ 479 (545)
T PRK08162 476 KWGE 479 (545)
T ss_pred ccCc
Confidence 7665
No 34
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=2.2e-62 Score=502.76 Aligned_cols=446 Identities=24% Similarity=0.320 Sum_probs=349.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeC----C-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYN----N-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
...|+.++|++.++.+|+++|+.+. + ..+||+|+.++++++|++|.+.|+++||+|+|+++|+++|++++|
T Consensus 40 ~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~l 119 (660)
T PLN02430 40 DITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAME 119 (660)
T ss_pred CCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4568999999999999999999642 1 247999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH-HHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 83 GVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS-LVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
||+++|++++|+++..+++++.++++.++++++|++..... .+.......+ ....++.+++.......... ..
T Consensus 120 A~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~---~l~~ii~~~~~~~~~~~~~~---~~ 193 (660)
T PLN02430 120 ACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELLEPDCKSAK---RLKAIVSFTSVTEEESDKAS---QI 193 (660)
T ss_pred HHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHHhhhcccCC---CceEEEEECCCChHHhhhhh---cC
Confidence 99999999999999999999999999999999999865322 2211111111 34556666432210000000 00
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---h--CCCCCCEEEEec
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---W--AVPKQPVYLWTL 236 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~--~~~~~~~~~~~~ 236 (485)
......+++++...........+..++++++++|||||||.||||++||+++..++...... + .+.++|++++.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~d~~ls~l 273 (660)
T PLN02430 194 GVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHDDVYLSFL 273 (660)
T ss_pred CcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCCCEEEEeC
Confidence 01122344444333221111223457899999999999999999999999998877655332 1 467889999999
Q ss_pred chhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-------C--------------
Q 036361 237 PMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-------D-------------- 295 (485)
Q Consensus 237 p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~-------------- 295 (485)
|++|.++....+.++..|+++++.+. ++..+++.|++++||++.++|.+++.+.+.. .
T Consensus 274 Pl~H~~~~~~~~~~l~~G~~i~~~~~-~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~ 352 (660)
T PLN02430 274 PLAHILDRMIEEYFFRKGASVGYYHG-DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPRRRLIFNALYKYK 352 (660)
T ss_pred cHHHHHHHHHHHHHHHcCCEEEEeCC-ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 99999998776667888998887654 7888999999999999999999998876421 0
Q ss_pred ------------CCC-------------C-CCCceEEeccCCCChhhhhhhhccC-CeeeeccCCccccccccccCCCCC
Q 036361 296 ------------FEP-------------L-KTPVQILTAGAPPPAPVLSRTESMG-FVVCHGYGLTETAGLVVSCSWKPE 348 (485)
Q Consensus 296 ------------~~~-------------l-~~lr~i~~~g~~l~~~~~~~~~~~~-~~i~~~Yg~tE~~~~~~~~~~~~~ 348 (485)
... + +++|.+++||+++++++.+.++.++ +.+++.||+||+++.++.....
T Consensus 353 ~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-- 430 (660)
T PLN02430 353 LAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFLRVTSCAFVVQGYGLTETLGPTTLGFPD-- 430 (660)
T ss_pred HHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHHHHhcCCCeeeecchhhhhhceEeeccc--
Confidence 000 1 5799999999999999877666665 6899999999998765543210
Q ss_pred CCCCChHHHhhhhhccCccccCcceeEEecC-CCC-CcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecC
Q 036361 349 WDKLPLEERARLKARQGVKTVGLTEVDVVNP-ETG-ESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTG 426 (485)
Q Consensus 349 ~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~-~~~-~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TG 426 (485)
.....+++|.|.+++ ++++.+. +.+ .++..+ ..|||+|+|++++.||+++++.+...|. +|||+||
T Consensus 431 --------~~~~~gsvG~p~~~~-evki~d~~~~g~~~~~~~--~~GEi~vrg~~v~~GY~~~~e~t~~~~~-dGw~~TG 498 (660)
T PLN02430 431 --------EMCMLGTVGAPAVYN-ELRLEEVPEMGYDPLGEP--PRGEICVRGKCLFSGYYKNPELTEEVMK-DGWFHTG 498 (660)
T ss_pred --------cCCCCCCccCCCCce-EEEEEEcCCcCcccCCCC--CcceEEecCCCccccccCChHHhhhhhh-ccceecc
Confidence 012246899999998 9999873 333 334444 5699999999999999999999999886 9999999
Q ss_pred ceEEEecCceEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 427 DIAVMHVDGYVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 427 D~~~~~~~g~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|+|++|+||+|++.||.+|+|| .+|++|+|.+||+++.++|.|.+|+|+|..
T Consensus 499 Dig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~~~V~G~~ 551 (660)
T PLN02430 499 DIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVEDIWVYGDS 551 (660)
T ss_pred ceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeEEEEEecC
Confidence 9999999999999999999999 479999999999999999999999999954
No 35
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=1.7e-61 Score=488.08 Aligned_cols=441 Identities=22% Similarity=0.333 Sum_probs=366.3
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+...++.++++++++.+|+++|+++.++++||+||.++++++|.+|.+.|+++|++|+++++|++++++++|||+++|++
T Consensus 20 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~~G~~ 99 (527)
T TIGR02275 20 WQDKPLTDILRDQAARYPDAIAIICGNRQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFALLKLGIA 99 (527)
T ss_pred ccCCcHHHHHHHHHHHCCCceEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHHcCeE
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH-----HHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS-----LVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
++++++..+.+++..+++.+++++++++..... .........+ ....++....... .
T Consensus 100 ~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---~------------ 161 (527)
T TIGR02275 100 PVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLP---TLRNIIVAGQTRV---E------------ 161 (527)
T ss_pred EeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCC---cceEEEEecCCCC---c------------
Confidence 999999999999999999999999999865421 1111111111 2233333221100 0
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
............. .......++++++++|||||||.||+|.++|+++..+.......+.++.++++++.+|++|.+++.
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~ 240 (527)
T TIGR02275 162 AELFLWLESPAEP-VKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLS 240 (527)
T ss_pred chhhHHhhCcCcc-ccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhh
Confidence 0000001111111 111234578999999999999999999999999998888877778889999999999999999886
Q ss_pred H--HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 246 Y--TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 246 ~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
. ++.++..|+++++.+.+++..+++.++++++|++.++|++++.+.+.. ....++++|.+++||+++++++.+.+.
T Consensus 241 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~ 320 (527)
T TIGR02275 241 SPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKSRYDLSSLKLLQVGGAKFSEAAARRVP 320 (527)
T ss_pred HHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHHH
Confidence 4 678889999999988889999999999999999999999999988765 335678899999999999999999998
Q ss_pred -ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCcccc-CcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 -SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTV-GLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 -~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~-~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
.++.++++.||+||++....... .. ......++|+|.+ +. .++|+|+ +++++++| +.|||+++|
T Consensus 321 ~~~g~~~~~~YG~tE~~~~~~~~~-~~---------~~~~~~~~G~~~~~~~-~v~i~d~-~g~~~~~g--~~Gei~v~g 386 (527)
T TIGR02275 321 AVFGCQLQQVFGMAEGLVNYTRLD-DP---------AEIIFTTQGRPMSPDD-EVRVVDD-HGNPVAPG--ETGMLLTRG 386 (527)
T ss_pred HHhCCeEEeeeccCccCccccCCC-Cc---------cccccccCCCCCCCCc-eEEEECC-CCCCCCCC--CceEEEecC
Confidence 57999999999999653322111 00 0112357899985 55 9999995 78889988 889999999
Q ss_pred CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 400 GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
++++.||+++++.+...+.+++||+|||+|++++||++++.||.+|+|+++|++++|.+||+.|.++|+|.+++|++.++
T Consensus 387 ~~~~~gY~~~~~~~~~~~~~dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~ 466 (527)
T TIGR02275 387 PYTFRGYYKAPEHNAAAFDAEGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLLLAHPAVHDAALVSMPD 466 (527)
T ss_pred CccchhhcCChhHhHhhcCcCCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHHHhCCCceEEEEEecCC
Confidence 99999999999999888888999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 036361 480 KFWGE 484 (485)
Q Consensus 480 ~~~g~ 484 (485)
+..||
T Consensus 467 ~~~~~ 471 (527)
T TIGR02275 467 ELLGE 471 (527)
T ss_pred ccccc
Confidence 88775
No 36
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.3e-62 Score=506.86 Aligned_cols=440 Identities=22% Similarity=0.296 Sum_probs=344.0
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeC---------------------------CeeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYN---------------------------NTTYTWSETHRRCLQVASSLSSVGIQRG 64 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~---------------------------~~~~Ty~~l~~~~~~lA~~L~~~gi~~g 64 (485)
...|+.++|+++++.+|+++|+.+. .+++||+||.++++++|++|.++|+++|
T Consensus 67 ~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~g 146 (700)
T PTZ00216 67 YGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKG 146 (700)
T ss_pred CCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCC
Confidence 3568999999999999999999873 3789999999999999999999999999
Q ss_pred CEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEe
Q 036361 65 HVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLV 144 (485)
Q Consensus 65 d~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 144 (485)
|+|+|+++|+++|+++++||+++|++++|+++..+++++.++++.++++++|++......+......... ....++.+
T Consensus 147 d~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~--~~~~ii~~ 224 (700)
T PTZ00216 147 SNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDALAYALRETECKAIVCNGKNVPNLLRLMKSGGM--PNTTIIYL 224 (700)
T ss_pred CEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccEEEECHHHHHHHHHhhhhccC--CceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999987655544433322111 12345555
Q ss_pred cCCcccccCccCCCccccccccccccccccCC---CCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH
Q 036361 145 DDDAAASSTTTTSPTVTVDFIDTYEGFVEEGD---PKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL 221 (485)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~ 221 (485)
++...... ........|+++..... .......+..++++++++|||||||.||||++||+++..++....
T Consensus 225 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~ 297 (700)
T PTZ00216 225 DSLPASVD-------TEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALE 297 (700)
T ss_pred CCCccccc-------cCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHH
Confidence 43211000 00011234444443321 111112234678999999999999999999999999998877665
Q ss_pred HHh-----CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHH-------HHHhcCceeeecchHHHHH
Q 036361 222 IDW-----AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISD-------LIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 222 ~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~-------~i~~~~~t~~~~~p~~~~~ 289 (485)
..+ ...+++++++.+|++|.+++......+..|+++.+. ++..+.+ .++++++|++.++|.+++.
T Consensus 298 ~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~~---~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~ 374 (700)
T PTZ00216 298 DRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGFG---SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDT 374 (700)
T ss_pred hhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEEC---CHHHhhhhhccccchHHHcCCcEEEechHHHHH
Confidence 443 236789999999999999876655556667766553 4455554 6889999999999999988
Q ss_pred HhCCCC---------------------------CC----------------CCCCCceEEeccCCCChhhhhhhhc-cCC
Q 036361 290 ISNSPD---------------------------FE----------------PLKTPVQILTAGAPPPAPVLSRTES-MGF 325 (485)
Q Consensus 290 l~~~~~---------------------------~~----------------~l~~lr~i~~~g~~l~~~~~~~~~~-~~~ 325 (485)
+.+... .. ..+++|.+++||+++++++.+.++. ++
T Consensus 375 l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~- 453 (700)
T PTZ00216 375 IKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG- 453 (700)
T ss_pred HHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-
Confidence 764210 00 0157999999999999999887774 46
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCC-CcccCCCceecEEEEecCcccc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETG-ESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~-~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
++++.||+||+++.++..... ....+++|.|.+++ +++|+|++.. ....++ ..|||+|+|++++.
T Consensus 454 ~l~~~YG~TEt~~~~~~~~~~-----------~~~~~svG~p~~g~-evkI~d~~~~~~~~~~~--~~GEL~vrG~~v~~ 519 (700)
T PTZ00216 454 MVIQGWGLTETVCCGGIQRTG-----------DLEPNAVGQLLKGV-EMKLLDTEEYKHTDTPE--PRGEILLRGPFLFK 519 (700)
T ss_pred hHhhccCcccccccccccCCC-----------CCCCCCcCCcCCCe-EEEEeechhhccCCCCC--CCceEEEcCCcccc
Confidence 999999999997655432210 11246899999999 9999996432 223444 56999999999999
Q ss_pred cccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcce--eEEEecc
Q 036361 405 GYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNE--AAVVARP 478 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~--~~v~~~~ 478 (485)
||+++++.+...|..+|||+|||+|++|+||+|+|+||.+|+|| .+|++|+|.+||+++.++|.|.+ ++|++.+
T Consensus 520 GY~~~pe~T~~~f~~dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~~~p~V~~~~~~v~~~~ 596 (700)
T PTZ00216 520 GYYKQEELTREVLDEDGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYGQNELVVPNGVCVLVHP 596 (700)
T ss_pred hhcCChhHhhhhccccCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHhcCcCcccceEEEEEec
Confidence 99999999999998899999999999999999999999999999 99999999999999999999997 3444443
No 37
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-61 Score=485.18 Aligned_cols=423 Identities=20% Similarity=0.311 Sum_probs=359.1
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
|++.+.|+++++++|+++|+.+.+.++||.||.++++++|++|.+.|. +|++|+++++|++++++++|||+++|++++|
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 79 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKENDRVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGAAMAGWTCVP 79 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecCCcEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHHHHcCeEEEe
Confidence 578899999999999999999999999999999999999999999885 8999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++.++.+++.++++.+++++++++......+.. ....++.+++.. +...
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~---------~~~~~~~~~~~~---------------------~~~~ 129 (487)
T PRK07638 80 LDIKWKQDELKERLAISNADMIVTERYKLNDLPD---------EEGRVIEIDEWK---------------------RMIE 129 (487)
T ss_pred cCccCCHHHHHHHHHhCCCCEEEEecccccchhh---------ccceEEEehhhh---------------------hhhh
Confidence 9999999999999999999999998765443321 011222222110 0011
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAV 253 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 253 (485)
...... .......+++++++|||||||.||+|+++|+++..++......+.+.++|+++...|++|..++..++.++..
T Consensus 130 ~~~~~~-~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~ 208 (487)
T PRK07638 130 KYLPTY-APIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFLYGAISTLYV 208 (487)
T ss_pred hccccc-cccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHHHHHHHHHcc
Confidence 111100 0111234678999999999999999999999999888888778889999999999999999888778889999
Q ss_pred cceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhc-c-CCeeeecc
Q 036361 254 GATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTES-M-GFVVCHGY 331 (485)
Q Consensus 254 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~i~~~Y 331 (485)
|+++++.+.+++..+++.++++++|++.++|++++.|.+.. ....+.+.++++|+.++.+..+++.+ + +.++++.|
T Consensus 209 g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~--~~~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~Y 286 (487)
T PRK07638 209 GQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN--RVIENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFY 286 (487)
T ss_pred CcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc--CcCCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999999998763 22445667788999999999999884 4 78999999
Q ss_pred CCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChh
Q 036361 332 GLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKE 411 (485)
Q Consensus 332 g~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~ 411 (485)
|+||++.++..... .......++|.|.++. .++|+|+ ++.++++| +.|||+++|+.++.||+++++
T Consensus 287 G~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~Gel~v~~~~~~~gy~~~~~ 352 (487)
T PRK07638 287 GASELSFVTALVDE----------ESERRPNSVGRPFHNV-QVRICNE-AGEEVQKG--EIGTVYVKSPQFFMGYIIGGV 352 (487)
T ss_pred cCCccCceEEeccc----------ccCCCCCCCCcccCCc-EEEEECC-CCCCCCCC--CCeEEEEecccceeeecCCHH
Confidence 99999876554321 1112346889999998 9999996 78999998 889999999999999999998
Q ss_pred hhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 412 STRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 412 ~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
.+...+. ++||+|||+|++|+||.++++||.+|+||++|.+|+|.+||+++.++|+|.+++|++.+++..|++
T Consensus 353 ~~~~~~~-~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~g~~ 425 (487)
T PRK07638 353 LARELNA-DGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDEIVVIGVPDSYWGEK 425 (487)
T ss_pred HHhhhcc-CCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeeeEEEEecCchhcCCe
Confidence 7766655 899999999999999999999999999999999999999999999999999999999999887763
No 38
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=1.4e-62 Score=471.40 Aligned_cols=452 Identities=24% Similarity=0.297 Sum_probs=377.8
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 81 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~ 81 (485)
...+.|+++.+.+.+..+|+.+++.... ..+||.|..+++.+++..|+.+|+++++.|+|+.-|++||+++.
T Consensus 71 ~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~~~~~VGIy~~N~pEWiis~ 150 (691)
T KOG1256|consen 71 FDGPLTLYEGFRRSVEKSGNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKLGVKEDSKVGIYAFNRPEWIISE 150 (691)
T ss_pred CCCcccHHHHhhcchhccCCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHhCCCCCceEEEeccCChhhHHhH
Confidence 5788999999999999999999997643 68999999999999999999999999999999999999999999
Q ss_pred HhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEc-CcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 82 FGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVD-HLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
.||...|.+.|||....+++.+.++++.+.+++|||+ +.....+.+..... .....+.+|.+++...........
T Consensus 151 ~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~-~~~~LK~iI~~~~~~~~~~~~~~~--- 226 (691)
T KOG1256|consen 151 MACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKEND-SLPSLKAIIQLDEPSDELKEKAEN--- 226 (691)
T ss_pred HHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccc-cCccceeEEEecCCchhhhhhhhc---
Confidence 9999999999999999999999999999999999999 45555555544431 122567778777765333222211
Q ss_pred ccccccccccccccCCCCCCCC-CCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh------CCCCCCEEE
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWV-RPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW------AVPKQPVYL 233 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~------~~~~~~~~~ 233 (485)
......+|++++..+....... .+.+++|.|.|.|||||||.||||++||+|+...+....... ....+|+++
T Consensus 227 ~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~l 306 (691)
T KOG1256|consen 227 NGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVYL 306 (691)
T ss_pred CCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhcccccccccCceEE
Confidence 1123577788887776554444 367899999999999999999999999999988655432221 223479999
Q ss_pred EecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-------------------
Q 036361 234 WTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP------------------- 294 (485)
Q Consensus 234 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~------------------- 294 (485)
+.+||.|.+....-...+..|+++.+.+. |+..+.+.|++.+||.+.++|.+|+++.+..
T Consensus 307 SyLPLAHi~er~~~~~~~~~G~~IgF~~g-D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~sgflkr~l~~~A~ 385 (691)
T KOG1256|consen 307 SYLPLAHIFERVVELYTFYIGAKIGFARG-DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKSGFLKRKLFNFAM 385 (691)
T ss_pred EeCcHHHHHHHHHHHhHhhcccEEEEecC-ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 99999999998887777788999999884 8899999999999999999999999887542
Q ss_pred --C----------C--CC--------------CCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCC
Q 036361 295 --D----------F--EP--------------LKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSW 345 (485)
Q Consensus 295 --~----------~--~~--------------l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~ 345 (485)
+ . .. -..+|.+++|++++++++...++ .++++|+++||+||+++.++....
T Consensus 386 ~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eGYGlTEts~g~~~~~~ 465 (691)
T KOG1256|consen 386 AYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEGYGLTETSAGTTLTLP 465 (691)
T ss_pred HHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeecccccccCCceEeccC
Confidence 0 0 00 13679999999999999999999 558999999999999844444321
Q ss_pred CCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeec
Q 036361 346 KPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYT 425 (485)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~T 425 (485)
.. ..-+++|.|++++ +++++|++.-+.-+.+ ..|||+++|++++.|||++|+.|.+.++.|||++|
T Consensus 466 ~d-----------~~lgsvG~p~p~~-~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDGWLhT 531 (691)
T KOG1256|consen 466 GD-----------NVLGSVGPPVPGN-EVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDGWLHT 531 (691)
T ss_pred CC-----------CCCCCcCCcccCc-eEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccccccc
Confidence 11 1347999999999 9999998766666666 56999999999999999999999999999999999
Q ss_pred CceEEEecCceEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 426 GDIAVMHVDGYVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 426 GD~~~~~~~g~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
||+|+++++|.|.+.||.++++| .+|+.|.|..||++..+.+.|.+.+|.+...+
T Consensus 532 GDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~qi~V~g~s~~ 587 (691)
T KOG1256|consen 532 GDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQIFVLGDSLR 587 (691)
T ss_pred ccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEEEEEECCcch
Confidence 99999999999999999999999 89999999999999999999999999987743
No 39
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.2e-61 Score=488.52 Aligned_cols=453 Identities=23% Similarity=0.333 Sum_probs=363.3
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
..|+.++|++.++.+|+++|+++.++++||+||+++++++|+.|.+ .|+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~~~~~l~~~a~~~p~~~al~~~~~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~la~~~~Ga~~ 102 (562)
T PRK05677 23 YPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAVFGAMRAGLIV 102 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 3589999999999999999999999999999999999999999997 699999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCcc------------CCCc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTT------------TSPT 159 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~ 159 (485)
+|++|..+.+++.++++.++++++|++....+.+.+..... ..+.+++.+.......... ....
T Consensus 103 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK05677 103 VNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPKT----GVKHVIVTEVADMLPPLKRLLINAVVKHVKKMVPA 178 (562)
T ss_pred eecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhcc----CcceeEEecccccccchhhhhcccchhhccccccc
Confidence 99999999999999999999999999877666554443221 1233333221100000000 0000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC--CC-CCCEEEEec
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA--VP-KQPVYLWTL 236 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 236 (485)
........+.+.+..............++++++++|||||||.||+|+++|+++..++......+. +. ..+++++.+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK05677 179 YHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGSNLNEGCEILIAPL 258 (562)
T ss_pred cCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhccCCCCCccEEEEcC
Confidence 000011112222222111111122345689999999999999999999999999877665554443 33 346889999
Q ss_pred chhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCC
Q 036361 237 PMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 237 p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l 312 (485)
|++|.+++.. ++..+..|++.++.+ .+++..+++.++++++|+++++|+++..+.+.. ....++++|.+++||+++
T Consensus 259 pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~v~~gG~~~ 338 (562)
T PRK05677 259 PLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAFRKLDFSALKLTLSGGMAL 338 (562)
T ss_pred cHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhCcccccCChhhceEEEEcCccC
Confidence 9999999865 566777787766665 578999999999999999999999999998765 233567899999999999
Q ss_pred Chhhhhhhhc-cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCce
Q 036361 313 PAPVLSRTES-MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVS 391 (485)
Q Consensus 313 ~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~ 391 (485)
++++.+.+++ +++++++.||+||+++++...... ....+++|.|.++. .++|+|+ ++++++.| +
T Consensus 339 ~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~-----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g--~ 403 (562)
T PRK05677 339 QLATAERWKEVTGCAICEGYGMTETSPVVSVNPSQ-----------AIQVGTIGIPVPST-LCKVIDD-DGNELPLG--E 403 (562)
T ss_pred CHHHHHHHHHHcCCCeeccCCccccCcceeecCcc-----------CCCCCccCccCCCC-EEEEECC-CCCCCCCC--C
Confidence 9999999884 599999999999998765543211 01235789999998 9999996 68899998 8
Q ss_pred ecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcce
Q 036361 392 LGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNE 471 (485)
Q Consensus 392 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~ 471 (485)
.|||+++|+.++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+++|.+|+|.+||+.|.++++|.+
T Consensus 404 ~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~ 483 (562)
T PRK05677 404 VGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTGDIALIQEDGYMRIVDRKKDMILVSGFNVYPNELEDVLAALPGVLQ 483 (562)
T ss_pred CeEEEEecCccchhhcCCchhhhhccCCCCcccccceEEECCCCcEEEEecCcCeEEeCCEEECHHHHHHHHHhCCCccE
Confidence 89999999999999999999999999888999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCCCC
Q 036361 472 AAVVARPDKFWGE 484 (485)
Q Consensus 472 ~~v~~~~~~~~g~ 484 (485)
++|++.+++..|+
T Consensus 484 ~~v~g~~~~~~g~ 496 (562)
T PRK05677 484 CAAIGVPDEKSGE 496 (562)
T ss_pred EEEEeccCccCCc
Confidence 9999999987765
No 40
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-61 Score=493.56 Aligned_cols=437 Identities=24% Similarity=0.375 Sum_probs=364.2
Q ss_pred hhHHHHHHHh-hcCCCcEEEeCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 16 TLGFLERAAT-AYSDCPSIVYNN----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 16 l~~~l~~~a~-~~p~~~a~~~~~----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.++++++++. .+|+++|+.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 45 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~G~v 124 (570)
T PRK04319 45 AYEAIDRHADGGRKDKVALRYLDASRKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLGALKNGAI 124 (570)
T ss_pred HHHHHHHhhccCCCCceEEEEECCCCceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCcE
Confidence 3467888877 479999998753 68999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|+++..+++++.++++.++++++|++......... ...+ ....++.+++..... .....+.+
T Consensus 125 ~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~-----------~~~~~~~~ 188 (570)
T PRK04319 125 VGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA--DDLP---SLKHVLLVGEDVEEG-----------PGTLDFNA 188 (570)
T ss_pred EcccccccCHHHHHHHHHccCCcEEEEChhhhhccch--hcCC---CceEEEEECCCcCCC-----------cCccCHHH
Confidence 9999999999999999999999999998765443221 1111 234455544321100 11123333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWG 249 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 249 (485)
......... ...+..++++++++|||||||.||+|+++|+++..+.......+.+.++|++++..|++|.+|... ++.
T Consensus 189 ~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~ 267 (570)
T PRK04319 189 LMEQASDEF-DIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFA 267 (570)
T ss_pred HHhhcCCcC-CccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHH
Confidence 332222211 122345679999999999999999999999999988877777788899999999999999988654 788
Q ss_pred HHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhh-cc
Q 036361 250 MAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTE-SM 323 (485)
Q Consensus 250 ~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~ 323 (485)
++..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.. ....++++|.++++|+++++++.++++ .+
T Consensus 268 ~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 347 (570)
T PRK04319 268 PWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGEPLNPEVVRWGMKVF 347 (570)
T ss_pred HHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEcccCCCHHHHHHHHHHh
Confidence 999999988875 689999999999999999999999999998653 234678999999999999999999988 56
Q ss_pred CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec--Cc
Q 036361 324 GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG--GC 401 (485)
Q Consensus 324 ~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~--~~ 401 (485)
+.++++.||+||++++++...... ....+++|.|.++. +++|+|+ ++.++++| +.|||++++ ++
T Consensus 348 g~~i~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~~ 413 (570)
T PRK04319 348 GLPIHDNWWMTETGGIMIANYPAM----------DIKPGSMGKPLPGI-EAAIVDD-QGNELPPN--RMGNLAIKKGWPS 413 (570)
T ss_pred CCCeEeceeecccCCEEEecCCCC----------CCCCCcCcCCCCCC-EEEEECC-CCCCCCCC--CceEEEEcCCCCh
Confidence 999999999999987654321110 11235889999998 9999996 77888888 889999997 89
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...|. +|||+|||++++++||.++++||.+|+|+.+|++|+|.+||+.+.++|+|.+++|++.+++.
T Consensus 414 ~~~GY~~~~~~~~~~~~-~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~V~~~~v~g~~~~~ 492 (570)
T PRK04319 414 MMRGIWNNPEKYESYFA-GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPAVAEAGVIGKPDPV 492 (570)
T ss_pred HHhHhcCCHHHhhhhhc-CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCCeeecceecccCcC
Confidence 99999999999998887 89999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCC
Q 036361 482 WGE 484 (485)
Q Consensus 482 ~g~ 484 (485)
.||
T Consensus 493 ~g~ 495 (570)
T PRK04319 493 RGE 495 (570)
T ss_pred Cce
Confidence 876
No 41
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-61 Score=498.28 Aligned_cols=449 Identities=23% Similarity=0.288 Sum_probs=356.6
Q ss_pred hHHHHHHHhhcCCCcEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 17 LGFLERAATAYSDCPSIVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+++|+++++.+|+++|+++. .+++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 56 ~~~l~~~~~~~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav 135 (629)
T PRK10524 56 HNAVDRHLAKRPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACARIGAI 135 (629)
T ss_pred HHHHHHhhccCCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcE
Confidence 67888888889999999872 368999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcc---------hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLH---------SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
++|+++..+.+++..+++.++++++|+++.. .+.+.++...... ....+++++........ ..
T Consensus 136 ~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~vi~~~~~~~~~~~---~~--- 207 (629)
T PRK10524 136 HSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQH--KPRHVLLVDRGLAPMAR---VA--- 207 (629)
T ss_pred EEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCC--CCCEEEEEeCCCCCcCc---cc---
Confidence 9999999999999999999999999997642 2333333332221 23455555432110000 00
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHH-HHHHHhCCCCCCEEEEecchhh
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTA-NALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
.....+.++...............++++++++|||||||.||+|+++|.++..... .....+++.+++++++..|+.|
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 286 (629)
T PRK10524 208 -GRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCASDIGW 286 (629)
T ss_pred -CCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcCCCCe
Confidence 01112222222211111111224568999999999999999999999998765443 3344567888999999999999
Q ss_pred HhHHH-HHHHHHhhcceEeecc----cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCC
Q 036361 241 ANGWG-YTWGMAAVGATNICLR----RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 241 ~~g~~-~~~~~l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~ 311 (485)
..+.. .++.+++.|+++++.+ ..++..+++.++++++|++.++|++++.|.+.. ...+++++|.++++|++
T Consensus 287 ~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~~Ge~ 366 (629)
T PRK10524 287 VVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPALLRKHDLSSLRALFLAGEP 366 (629)
T ss_pred eccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcccccccChhheeEEEEeCCC
Confidence 88764 4788899999998875 357899999999999999999999999987653 23467899999999999
Q ss_pred CChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCc
Q 036361 312 PPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGV 390 (485)
Q Consensus 312 l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~ 390 (485)
+++++.+++. .+++++++.||+||++..+........ ......+++|.|.+++ +++|+|+++|+++++|
T Consensus 367 l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~~~G~p~~g~-~~~i~d~~~g~~~~~g-- 436 (629)
T PRK10524 367 LDEPTASWISEALGVPVIDNYWQTETGWPILAIARGVE-------DRPTRLGSPGVPMYGY-NVKLLNEVTGEPCGPN-- 436 (629)
T ss_pred CCHHHHHHHHHhcCCCeEeccccccccchhhcCCCCcc-------cCcCCCCCcccCcCCc-eEEEEeCCCCCCCCCC--
Confidence 9999999887 568999999999999854333211100 0012245789999998 9999997689999988
Q ss_pred eecEEEEecC---cccccccCChhhhcccc---cCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh
Q 036361 391 SLGEVVLRGG---CVTVGYFKDKESTRRCI---SDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY 464 (485)
Q Consensus 391 ~~Gel~v~~~---~~~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~ 464 (485)
+.|||+++|| +++.||+++++.....+ ..++||+|||+|++|+||.++++||.+|+||++|++|+|.+||++|.
T Consensus 437 ~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~G~ri~p~eIE~~l~ 516 (629)
T PRK10524 437 EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYSTFDWGIRDADGYYFILGRTDDVINVAGHRLGTREIEESIS 516 (629)
T ss_pred CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeCCEEeCHHHHHHHHH
Confidence 8899999998 57889999887655432 13689999999999999999999999999999999999999999999
Q ss_pred cCcCcceeEEEeccCCCCCC
Q 036361 465 SNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 465 ~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|.+++|++.+++..||
T Consensus 517 ~~p~V~e~~vvg~~d~~~g~ 536 (629)
T PRK10524 517 SHPAVAEVAVVGVKDALKGQ 536 (629)
T ss_pred hCCCcceEEEEccccCCCCe
Confidence 99999999999999998776
No 42
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.8e-61 Score=485.05 Aligned_cols=454 Identities=32% Similarity=0.552 Sum_probs=387.4
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
.+.+.++.++|.++++.+|+++|+.+.++.+||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+
T Consensus 2 ~~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~la~~~~G~ 81 (521)
T PRK06187 2 QDYPLTIGRILRHGARKHPDKEAVYFDGRRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAYFAVPKIGA 81 (521)
T ss_pred CcccCCHHHHHHHHHHHCCCceEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCe
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++..+++.+++++++++.+..+.+.+.....+ ..+.++..++.... ........+.
T Consensus 82 ~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---------~~~~~~~~~~ 149 (521)
T PRK06187 82 VLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILPQLP---TVRTVIVEGDGPAA---------PLAPEVGEYE 149 (521)
T ss_pred EEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhhccC---CccEEEEecCcccc---------ccccccccHH
Confidence 99999999999999999999999999999988877766655443 34556665554321 0001123333
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHH
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWG 249 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 249 (485)
+++........ .....++++++++|||||||.||+|.++|+++..........+++.+++++++..|++|..++...+.
T Consensus 150 ~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 228 (521)
T PRK06187 150 ELLAAASDTFD-FPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLPYL 228 (521)
T ss_pred HHhhcCCccCC-CCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHHHH
Confidence 33333222221 22345678999999999999999999999999988888888889999999999999999999888777
Q ss_pred HHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhhc-cCCe
Q 036361 250 MAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTES-MGFV 326 (485)
Q Consensus 250 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~~-~~~~ 326 (485)
++..|+++++.+.+++..+++.++++++|.++++|++++.|.+... ...++++|.++++|+.+++++.+.+.+ ++++
T Consensus 229 ~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge~l~~~~~~~~~~~~~~~ 308 (521)
T PRK06187 229 ALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGAALPPALLREFKEKFGID 308 (521)
T ss_pred HHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCcCCCHHHHHHHHHHhCcc
Confidence 9999999999988899999999999999999999999999988763 456789999999999999999999984 4999
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||+++++..+....... .......++|.|.++. .++|+|+ ++.+++.+.++.|||+++|+.++.||
T Consensus 309 v~~~YG~tE~~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~~g~~Gel~v~~~~~~~~y 381 (521)
T PRK06187 309 LVQGYGMTETSPVVSVLPPEDQLP-----GQWTKRRSAGRPLPGV-EARIVDD-DGDELPPDGGEVGEIIVRGPWLMQGY 381 (521)
T ss_pred hheeeccCccCcccccCCcccccc-----cccccCCccccccCCe-EEEEECC-CCCCCCCCCCCeeEEEEECcchhhhh
Confidence 999999999987666543221100 0112346889999998 9999996 67888882228899999999999999
Q ss_pred cCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 407 FKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+++++.+...|. ++||+|||+++++++|.+++.||.+|+++++|.++++.+||+++.++++|.+++|++.+++..|+
T Consensus 382 ~~~~~~~~~~~~-~~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 458 (521)
T PRK06187 382 WNRPEATAETID-GGWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDALYGHPAVAEVAVIGVPDEKWGE 458 (521)
T ss_pred cCCHHHHHHHhh-CCceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHHHHhCCCceEEEEEeccCCCcCc
Confidence 999998888887 77999999999999999999999999999999999999999999999999999999998877665
No 43
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=4.9e-61 Score=487.24 Aligned_cols=446 Identities=26% Similarity=0.374 Sum_probs=371.3
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~-~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
....++.++++++++.+|+++|+.+.+ +++||+||+++++++|++|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 20 ~~~~~l~~~~~~~~~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 99 (547)
T PRK06087 20 WGDASLADYWQQTARAMPDKIAVVDNHGASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLACLKVGA 99 (547)
T ss_pred CCCCCHHHHHHHHHHHCCCceEEEcCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCc
Confidence 345689999999999999999999876 7999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc-----hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLH-----SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~-----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
+++|+++..+.+++..+++.+++++++++... .+.+.+...... ....++.++...... .
T Consensus 100 ~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~------------~ 164 (547)
T PRK06087 100 VSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLP---QLQQIVGVDKLAPAT------------S 164 (547)
T ss_pred EEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCC---CCcEEEEeCCcCCCc------------C
Confidence 99999999999999999999999999997632 223333333322 334555554332100 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHH
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGW 244 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 244 (485)
...+.++........ .......+++++++|||||||.||+|.++|.++..........+.+.+++++++..|++|.+++
T Consensus 165 ~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~ 243 (547)
T PRK06087 165 SLSLSQIIADYEPLT-TAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGF 243 (547)
T ss_pred ccCHHHHhccCCccc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHH
Confidence 112222222211111 1123456799999999999999999999999998888777777788999999999999999987
Q ss_pred HH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 245 GY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 245 ~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
.. ++.++..|+++++.+.+++..+++.++++++|+++.+|..+..+++.. ....++++|.+++||+++++++.+.+.
T Consensus 244 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~lr~i~~gG~~~~~~~~~~~~ 323 (547)
T PRK06087 244 LHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQPADLSALRFFLCGGTTIPKKVARECQ 323 (547)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccCCCCCCCeEEEEEcCCCCCHHHHHHHH
Confidence 64 677888899999999999999999999999999998877766666554 334678999999999999999999888
Q ss_pred ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCc
Q 036361 322 SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGC 401 (485)
Q Consensus 322 ~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~ 401 (485)
+.++++++.||+||++++...... ........++|.|.+++ .++++|+ +++++++| +.|||+++|+.
T Consensus 324 ~~~~~l~~~YG~TE~~~~~~~~~~---------~~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~ 390 (547)
T PRK06087 324 QRGIKLLSVYGSTESSPHAVVNLD---------DPLSRFMHTDGYAAAGV-EIKVVDE-ARKTLPPG--CEGEEASRGPN 390 (547)
T ss_pred HcCCcEEEEecccccCCccccCCC---------cchhhcCCcCCccCCCc-eEEEEcC-CCCCCcCC--CcceEEEeccc
Confidence 779999999999999876554321 11111234679999998 9999995 78899988 78999999999
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...+.+++||+|||+++++++|.++++||.+|+|+.+|.+++|.+||+++..+|+|.+++|++.+++.
T Consensus 391 ~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~~~v~~~~~~~ 470 (547)
T PRK06087 391 VFMGYLDEPELTARALDEEGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDER 470 (547)
T ss_pred ccccccCCHHHHHHHhCCCCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHHHhCCCeeEEEEEecCCCC
Confidence 99999999999988887789999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCC
Q 036361 482 WGET 485 (485)
Q Consensus 482 ~g~~ 485 (485)
.|++
T Consensus 471 ~g~~ 474 (547)
T PRK06087 471 LGER 474 (547)
T ss_pred cCce
Confidence 7763
No 44
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-61 Score=489.27 Aligned_cols=446 Identities=20% Similarity=0.247 Sum_probs=352.9
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhc
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 86 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~ 86 (485)
+...+.++.+.|.++|+.+|+++|+.+. +..+||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||++
T Consensus 9 ~~~~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~~~~~lA~~~ 88 (540)
T PRK05857 9 MPQLPSTVLDRVFEQARQQPEAIALRRCDGTSALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPETYLSVLACAK 88 (540)
T ss_pred cccCCcchHHHHHHHHhhCCCcEEEeecCCCceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 3456778999999999999999999863 36899999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccc
Q 036361 87 SGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFID 166 (485)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (485)
+|++++|+++..+.+++.++++.++++++|++.............. ....++.++......
T Consensus 89 ~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--------------- 149 (540)
T PRK05857 89 LGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMASSAVPEAL----HSIPVIAVDIAAVTR--------------- 149 (540)
T ss_pred cCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhccccccccc----cccceeEeecccccc---------------
Confidence 9999999999999999999999999999999876432211111100 011122222211000
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHh
Q 036361 167 TYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~ 242 (485)
.+......... .......++++++++|||||||.||+|.++|+++..+...... .+....+++.++.+|++|..
T Consensus 150 ~~~~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~ 227 (540)
T PRK05857 150 ESEHSLDAASL--AGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIG 227 (540)
T ss_pred ccccccccccc--ccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccc
Confidence 00000000000 0112345679999999999999999999999999876543321 23455678999999999999
Q ss_pred HHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhh
Q 036361 243 GWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
++...+.+++.|+++++ ...++..+++.++++++|+++++|++++.|.+.. ....++++|.++++|++++....+..
T Consensus 228 ~l~~~~~~l~~G~~~v~-~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~~~~~~~~~~ 306 (540)
T PRK05857 228 GLWWILTCLMHGGLCVT-GGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSANATVPSLRLVGYGGSRAIAADVRFI 306 (540)
T ss_pred hHHHHHHHhhcceeEEe-cCCChhHHHHHHHhcCcceEEeChHHHHHHHhccccCCCcCccceEEEEcCccCCchhHHHH
Confidence 98888889999998765 4568899999999999999999999999998765 23467899999999999988777655
Q ss_pred hccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCC---CceecEEEE
Q 036361 321 ESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRD---GVSLGEVVL 397 (485)
Q Consensus 321 ~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g---~~~~Gel~v 397 (485)
.++++++++.||+||++.....+..... .......+++|++.+++ +++|++++...+++++ .++.|||++
T Consensus 307 ~~~g~~i~~~YG~TE~~~~~~~~~~~~~------~~~~~~~~~~G~~~~g~-~v~i~d~~~~~~~~~~~~~~~~~Gel~v 379 (540)
T PRK05857 307 EATGVRTAQVYGLSETGCTALCLPTDDG------SIVKIEAGAVGRPYPGV-DVYLAATDGIGPTAPGAGPSASFGTLWI 379 (540)
T ss_pred HHhCCeeecccCCCcCCceeeecccccc------cccccccCCcCcccCCc-EEEEECccccCccccccCCCCCcceEEE
Confidence 5679999999999999854433221110 00011236899999998 9999997544344321 127899999
Q ss_pred ecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 398 RGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 398 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
+|++++.||+++++.+...|. +|||+|||+|++|++|++++.||.+|+||++|.+|+|.+||++|..||+|.+|+|++.
T Consensus 380 ~g~~~~~GY~~~~~~t~~~~~-~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~V~~~~v~~~ 458 (540)
T PRK05857 380 KSPANMLGYWNNPERTAEVLI-DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGVSGVREAACYEI 458 (540)
T ss_pred eCcchhhhhhCCccchhhhcC-CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhCCCeeEEEEEec
Confidence 999999999999999988887 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 036361 478 PDKFWGE 484 (485)
Q Consensus 478 ~~~~~g~ 484 (485)
+++.+|+
T Consensus 459 ~~~~~~~ 465 (540)
T PRK05857 459 PDEEFGA 465 (540)
T ss_pred Ccccccc
Confidence 9987765
No 45
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=7.6e-61 Score=484.61 Aligned_cols=438 Identities=28% Similarity=0.430 Sum_probs=363.7
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeC------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhc
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYN------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 86 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~ 86 (485)
..++.++++++++.+|+++|++.. .+.+||+||+++++++|.+|++.|+++||+|+++++|+++++++++||++
T Consensus 21 ~~~~~~~~~~~~~~~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~ 100 (538)
T TIGR03208 21 DRTINDHFDAAVANCPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLACAR 100 (538)
T ss_pred cCcHHHHHHHHHHHCCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHh
Confidence 468999999999999999999862 36899999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH-----HHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 87 SGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS-----LVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 87 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
+|++++|++|..+.+++.++++.+++++++++..... ...+...... ....++..+....
T Consensus 101 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------ 165 (538)
T TIGR03208 101 IGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLP---ALRQVVVIDGDGD------------ 165 (538)
T ss_pred cCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCC---cceEEEEecCCCC------------
Confidence 9999999999999999999999999999999876431 1222222221 2334555432210
Q ss_pred cccccccccccccC-----CC--CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEE
Q 036361 162 VDFIDTYEGFVEEG-----DP--KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLW 234 (485)
Q Consensus 162 ~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
..++..+... .. .........++++++++|||||||.||+|+++|+++...+......+.+..++++++
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~ 241 (538)
T TIGR03208 166 ----DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILM 241 (538)
T ss_pred ----cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEE
Confidence 0111111000 00 000112345689999999999999999999999999988888888888899999999
Q ss_pred ecchhhHhHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCC
Q 036361 235 TLPMFHANGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 235 ~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~ 311 (485)
.+|++|..++.. ++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.... ....++++|.++++|++
T Consensus 242 ~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~gG~~ 321 (538)
T TIGR03208 242 ASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESGAPVPSLFTFLCAGAP 321 (538)
T ss_pred eCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccCCCCCcceEEEEcCCC
Confidence 999999988754 788899999999988899999999999999999999999999887654 23467899999999999
Q ss_pred CChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCc
Q 036361 312 PPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGV 390 (485)
Q Consensus 312 l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~ 390 (485)
+++++.++++ .+++++++.||+||++.+...+.... ......++|+|.+++ +++|+++ ++.++++|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~g~-~v~i~~~-~~~~~~~g-- 388 (538)
T TIGR03208 322 IPGILVERAWELLGALIVSAWGMTENGAVTVTEPDDA---------LEKASTTDGRPLPGV-EVKVIDA-NGAKLSQG-- 388 (538)
T ss_pred CCHHHHHHHHHHcCCeEEeeeccCcCCCccccCcccc---------hhhccCcccccCCCC-EEEEECC-CCCCCcCC--
Confidence 9999999988 56899999999999987655432110 011234689999998 9999996 78889888
Q ss_pred eecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcc
Q 036361 391 SLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVN 470 (485)
Q Consensus 391 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~ 470 (485)
+.|||+++|++++.||+++++.+.. ..++||+|||+|+++++|.++++||.+|+|+.+|++|+|.+||++|.++|+|.
T Consensus 389 ~~Gel~v~g~~~~~gy~~~~~~~~~--~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~ 466 (538)
T TIGR03208 389 ETGRLLVRGCSNFGGYLKRPHLNST--DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEIENLLYQHPAVA 466 (538)
T ss_pred CCcEEEEecCcccccccCCcccccc--cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHHHHHHhcCccee
Confidence 7899999999999999999887643 35889999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeccCCCCCC
Q 036361 471 EAAVVARPDKFWGE 484 (485)
Q Consensus 471 ~~~v~~~~~~~~g~ 484 (485)
+++|++.+++..|+
T Consensus 467 ~~~v~~~~~~~~g~ 480 (538)
T TIGR03208 467 QVAIVAYPDERLGE 480 (538)
T ss_pred eEEEEeccCCCCCc
Confidence 99999999988776
No 46
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2e-61 Score=497.05 Aligned_cols=438 Identities=21% Similarity=0.266 Sum_probs=349.7
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHh
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNN---------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
..++.++|+++++.+|+++|+++.+ +.+||+||.++++++|++|++. +++||+|+++++|++++++++||
T Consensus 20 ~~~l~~~l~~~a~~~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~gd~V~i~~~n~~e~~~~~lA 98 (631)
T PRK07769 20 NTNLVRHVERWAKVRGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKPGDRVAILAPQNLDYLIAFFG 98 (631)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCCCCEEEEEcCCChHHHHHHHH
Confidence 3689999999999999999998732 5799999999999999999987 89999999999999999999999
Q ss_pred hhccCceEEec-CCCCC--HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 84 VPMSGAILNNI-NTRLD--AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 84 ~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
|+++|++++|+ ++..+ .+++.++++.++++++|++.+..+.+.+.....+.. ....++.++....
T Consensus 99 ~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----------- 166 (631)
T PRK07769 99 ALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAK-ERPRVIAVDAVPD----------- 166 (631)
T ss_pred HHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhcccc-ccceEEEcccccc-----------
Confidence 99999999999 55554 678999999999999999887665554433222110 1123333321100
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
. ... .. ...+..++++++++|||||||.||+|++||+++..++......+++.+++++++.+|++|
T Consensus 167 ------~----~~~---~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h 232 (631)
T PRK07769 167 ------E----VGA---TW-VPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFH 232 (631)
T ss_pred ------c----ccc---cc-CCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcC
Confidence 0 000 00 011245679999999999999999999999999988887777788889999999999999
Q ss_pred HhHHHHHHHHHhhcceEeecc--cC--CHHHHHHHHHhcCc---eeeecchHHHHHHhCC---C----CCCCCCCCceEE
Q 036361 241 ANGWGYTWGMAAVGATNICLR--RF--DASAISDLIQKHNV---THMCGAPVVLNMISNS---P----DFEPLKTPVQIL 306 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~--~~--~~~~~~~~i~~~~~---t~~~~~p~~~~~l~~~---~----~~~~l~~lr~i~ 306 (485)
.+|+..++.+++.|+++++++ .+ ++..+++.+.++++ +.+..+|.++..+... . ...+++++|.++
T Consensus 233 ~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~ 312 (631)
T PRK07769 233 DMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLL 312 (631)
T ss_pred chhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEE
Confidence 999988777788899988875 34 89999999999886 7888999887766542 1 134678999999
Q ss_pred eccCCCChhhhhhhhc-c---CC---eeeeccCCccccccccccCCCCCCCC--CChH--------------HHhhhhhc
Q 036361 307 TAGAPPPAPVLSRTES-M---GF---VVCHGYGLTETAGLVVSCSWKPEWDK--LPLE--------------ERARLKAR 363 (485)
Q Consensus 307 ~~g~~l~~~~~~~~~~-~---~~---~i~~~Yg~tE~~~~~~~~~~~~~~~~--~~~~--------------~~~~~~~~ 363 (485)
+||+++++++.+++.+ + ++ .+++.||+||++.+++.......... .... .......+
T Consensus 313 ~gg~~l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s 392 (631)
T PRK07769 313 NGSEPVSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVS 392 (631)
T ss_pred eccCCCCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEe
Confidence 9999999999999884 4 33 59999999999766554322111000 0000 00011247
Q ss_pred cCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccC-----------------CCeeecC
Q 036361 364 QGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISD-----------------NGWFYTG 426 (485)
Q Consensus 364 ~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-----------------~~~~~TG 426 (485)
+|++.++. .++|+|++++++++.| +.|||+++|++++.||+++++.+...|.+ ++||+||
T Consensus 393 ~G~~~~~~-~~~ivd~~~g~~~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TG 469 (631)
T PRK07769 393 AGKVGVSE-WAVIVDPETASELPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTG 469 (631)
T ss_pred CCCcCCCc-EEEEEcCCCCcCCCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeecc
Confidence 89999998 9999998789999998 88999999999999999999998887742 4899999
Q ss_pred ceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhc-CcCcce--eEEEeccCCC
Q 036361 427 DIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYS-NTAVNE--AAVVARPDKF 481 (485)
Q Consensus 427 D~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~-~~~v~~--~~v~~~~~~~ 481 (485)
|+|+++ ||+|+|+||.+|+||++|++|+|.|||++|.+ ||.|.+ ++|++.++++
T Consensus 470 Dlg~~~-dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~~~~~av~~v~d~~ 526 (631)
T PRK07769 470 DYGVYF-DGELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALRTGYVAAFSVPANQ 526 (631)
T ss_pred ccccEE-CCEEEEEcccccEEEECCeeeCHHHHHHHHHhccccccCCcEEEEEecccc
Confidence 999995 99999999999999999999999999999996 899998 9999999943
No 47
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.9e-61 Score=487.50 Aligned_cols=454 Identities=28% Similarity=0.365 Sum_probs=368.6
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
.+++.++++++++++|+++|+.+.++.+||.||+++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~~~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~~v 110 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFFGATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYAVLRLGAVVV 110 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEe
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCC--------------
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSP-------------- 158 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-------------- 158 (485)
|++|..+.+++.++++.++++++|++......+.+..... ....++.++.............
T Consensus 111 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (573)
T PRK05605 111 EHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRTT----PLETIVSVNMIAAMPLLQRLALRLPIPALRKARAAL 186 (573)
T ss_pred ecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhcc----ccceeEeeeccccccccccccccccccccccccccc
Confidence 9999999999999999999999999887666555443221 2233333321110000000000
Q ss_pred ccccccccccccccccCCCC---CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC--CCCCCEEE
Q 036361 159 TVTVDFIDTYEGFVEEGDPK---YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA--VPKQPVYL 233 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~ 233 (485)
.........|.++....... .........+++++++|||||||.||+|.++|+++..++......+. ...+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 266 (573)
T PRK05605 187 TGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPGLGDGPERVL 266 (573)
T ss_pred ccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccccCCCCcEEE
Confidence 00001112233322221111 01112345789999999999999999999999999877765444332 23478999
Q ss_pred EecchhhHhHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccC
Q 036361 234 WTLPMFHANGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGA 310 (485)
Q Consensus 234 ~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~ 310 (485)
+..|++|.+|+.. ++.++..|+++++.+.+++..+++.++++++|.+.++|++++.|.+.. ....++++|.++++|+
T Consensus 267 ~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gg~ 346 (573)
T PRK05605 267 AALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEERGVDLSGVRNAFSGAM 346 (573)
T ss_pred EecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccccCCCchhccEEEECCC
Confidence 9999999998765 566788899999988889999999999999999999999999998765 3346789999999999
Q ss_pred CCChhhhhhhhc-cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCC-CCcccCC
Q 036361 311 PPPAPVLSRTES-MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPET-GESVKRD 388 (485)
Q Consensus 311 ~l~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~-~~~~~~g 388 (485)
.+++++.+.+.+ ++..+++.||+||+++++..+.... ....+.+|.+.++. .++|+|+++ +.+++.|
T Consensus 347 ~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~~g 415 (573)
T PRK05605 347 ALPVSTVELWEKLTGGLLVEGYGLTETSPIIVGNPMSD----------DRRPGYVGVPFPDT-EVRIVDPEDPDETMPDG 415 (573)
T ss_pred cCCHHHHHHHHHHhCCCeecccccchhchhhhcCCccc----------CCcCCccccCCCCC-EEEEEcCCCCCccCCCC
Confidence 999999999884 5899999999999987766543111 11235789999998 999999866 6888888
Q ss_pred CceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcC
Q 036361 389 GVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTA 468 (485)
Q Consensus 389 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~ 468 (485)
+.|||+++|+.++.||+++++.+...|. +|||+|||+|+++++|.+++.||.+|+++.+|++|+|.+||+++..++.
T Consensus 416 --~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~ 492 (573)
T PRK05605 416 --EEGELLVRGPQVFKGYWNRPEETAKSFL-DGWFRTGDVVVMEEDGFIRIVDRIKELIITGGFNVYPAEVEEVLREHPG 492 (573)
T ss_pred --CeeEEEEecCchhhhhcCChhHhhhccc-CCCcccCCEEEEcCCCcEEEEeccccceeeCCEEECHHHHHHHHHhCcc
Confidence 8899999999999999999999988887 6799999999999999999999999999999999999999999999999
Q ss_pred cceeEEEeccCCCCCC
Q 036361 469 VNEAAVVARPDKFWGE 484 (485)
Q Consensus 469 v~~~~v~~~~~~~~g~ 484 (485)
|.+++|++.+++..|+
T Consensus 493 i~~~~v~~~~~~~~~~ 508 (573)
T PRK05605 493 VEDAAVVGLPREDGSE 508 (573)
T ss_pred cceEEEEeeecccCCe
Confidence 9999999999877654
No 48
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.3e-61 Score=485.05 Aligned_cols=452 Identities=23% Similarity=0.285 Sum_probs=364.2
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
++.....++.++|.++++.+|+++|++..++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++
T Consensus 4 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~la~~~~ 83 (540)
T PRK06164 4 DAAPRADTLASLLDAHARARPDAVALIDEDRPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLFLACARL 83 (540)
T ss_pred ccccCCCCHHHHHHHHHHhCCCCeEEecCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 34555668999999999999999999998899999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH-HHHHHhccCCC--CCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS-LVLEALSLFPR--DTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
|++++|+++..+.+++.++++.++++++|++.+... .+.+....... ......++.+++.........
T Consensus 84 G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 154 (540)
T PRK06164 84 GATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATPAPA--------- 154 (540)
T ss_pred CcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCCCCC---------
Confidence 999999999999999999999999999999876432 11111111110 012334444442111000000
Q ss_pred ccccccccccCCC---CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhH
Q 036361 165 IDTYEGFVEEGDP---KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHA 241 (485)
Q Consensus 165 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 241 (485)
...+.+....... .........++++++++|||||||.||+|.++|+++..+.......+++.+++++++.+|++|.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~~~ 234 (540)
T PRK06164 155 PGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLLAALPFCGV 234 (540)
T ss_pred cccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEcCCchhH
Confidence 0000011100000 0001112346789999999999999999999999999988888888889999999999999999
Q ss_pred hHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCC-CCCCCCCCCceEEecc-CCCChhhhhh
Q 036361 242 NGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNS-PDFEPLKTPVQILTAG-APPPAPVLSR 319 (485)
Q Consensus 242 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-~~~~~l~~lr~i~~~g-~~l~~~~~~~ 319 (485)
+|+..++.++..|+++++.+.+++..+++.|+++++|+++++|+++..|.+. .....+++++.+..+| .....+..++
T Consensus 235 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 314 (540)
T PRK06164 235 FGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTAGERADFPSARLFGFASFAPALGELAAL 314 (540)
T ss_pred HHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhhcccCCCcceeeeeeccCCcchHHHHHH
Confidence 9998889999999999999999999999999999999999999999999876 3556788888887766 4455566666
Q ss_pred hhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccc-cCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 320 TESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKT-VGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 320 ~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
+.+.++++++.||+||++++++....... ........|.+. +++ .++|+|+++++++++| +.|||+++
T Consensus 315 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~-~~~i~d~~~~~~~~~g--~~Gel~v~ 383 (540)
T PRK06164 315 ARARGVPLTGLYGSSEVQALVALQPATDP--------VSVRIEGGGRPASPEA-RVRARDPQDGALLPDG--ESGEIEIR 383 (540)
T ss_pred HhhcCCceecceeeccccceeeccCCCCC--------CcceeccCccccCCCe-EEEEecCCCCcCCCCC--CeeEEEEe
Confidence 66558999999999999876554332111 001123456665 565 9999998889999998 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|++++.||+++++.+...|..++||+|||+|++++||.+++.||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+
T Consensus 384 g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~i~p~eIE~~l~~~~~v~~~~v~~~~ 463 (540)
T PRK06164 384 APSLMRGYLDNPDATARALTDDGYFRTGDLGYTRGDGQFVYQTRMGDSLRLGGFLVNPAEIEHALEALPGVAAAQVVGAT 463 (540)
T ss_pred cccccccccCCchhhhhcccCCCceecCCeEEEcCCceEEEEeecCCeEEECCEEcCHHHHHHHHHhCCCceeEEEEecC
Confidence 99999999999999999998889999999999999999999999999999999999999999999999999999999987
Q ss_pred C
Q 036361 479 D 479 (485)
Q Consensus 479 ~ 479 (485)
+
T Consensus 464 ~ 464 (540)
T PRK06164 464 R 464 (540)
T ss_pred C
Confidence 4
No 49
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-61 Score=483.52 Aligned_cols=448 Identities=28% Similarity=0.417 Sum_probs=376.5
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
......++.++|.++++.+|+++|+.+.++.+||+||.+++.++|+.|.+.|+++||+|+++++|+++++++++||+++|
T Consensus 6 ~~~~~~~l~~~l~~~a~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~a~~~~G 85 (523)
T PRK08316 6 TRARRQTIGDILRRSARRYPDKTALVFGDRSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWLACARAG 85 (523)
T ss_pred ccccCCCHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcC
Confidence 34456789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++++|+++..+.+++..+++.+++++++++.+..+.+.+...... ...+........ ... ......+
T Consensus 86 ~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~--------~~~~~~~ 152 (523)
T PRK08316 86 AVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP----VDTLILSLVLGG-REA--------PGGWLDF 152 (523)
T ss_pred cEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC----ccceeeeecccc-ccc--------ccchhhH
Confidence 999999999999999999999999999999887777665543322 111111100000 000 0111222
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-H
Q 036361 169 EGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-T 247 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~ 247 (485)
.++....... ........+++++++|||||||.||+|.++|+++..+.......+.+.+++++++.+|++|..++.. +
T Consensus 153 ~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 231 (523)
T PRK08316 153 ADWAEAGSVA-EPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFL 231 (523)
T ss_pred HHHHhcCCCc-cCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHH
Confidence 2222222111 1223356789999999999999999999999999988888888888999999999999999998866 5
Q ss_pred HHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhhc-c-
Q 036361 248 WGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTES-M- 323 (485)
Q Consensus 248 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~- 323 (485)
+.++..|+++++.+..++..+++.++++++|++.++|+++..+.+.. ....++++|.+++||+.++.++.+.+++ +
T Consensus 232 ~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~~ 311 (523)
T PRK08316 232 GPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHPDFDTRDLSSLRKGYYGASIMPVEVLKELRERLP 311 (523)
T ss_pred HHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCcccccCCcccceEEEEcCCcCCHHHHHHHHHHcC
Confidence 56778899999998889999999999999999999999999998775 3456789999999999999999999984 4
Q ss_pred CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccc
Q 036361 324 GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVT 403 (485)
Q Consensus 324 ~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~ 403 (485)
++++++.||+||++.++..+.... ......++|++.+++ +++|+|+ ++++++.| +.|||+++|++++
T Consensus 312 ~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~~Gei~v~~~~~~ 378 (523)
T PRK08316 312 GLRFYNCYGQTEIAPLATVLGPEE---------HLRRPGSAGRPVLNV-ETRVVDD-DGNDVAPG--EVGEIVHRSPQLM 378 (523)
T ss_pred CCceeeeecccccCccccccCccc---------cccccCCcccCCCCc-EEEEEcC-CCCCCCCC--CcceEEEECCchh
Confidence 789999999999987766543211 112246889999998 9999996 68889998 8899999999999
Q ss_pred ccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 404 VGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 404 ~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
.||+++++.+...|. ++||+|||+|++++||.++++||.+|+|+++|.+++|.+||+.+.++++|.+++|++.+++..|
T Consensus 379 ~~y~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 457 (523)
T PRK08316 379 LGYWDDPEKTAEAFR-GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYTHPAVAEVAVIGLPDPKWI 457 (523)
T ss_pred hhhcCCHHHHHHHhh-CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHhCCChheEeEecccCcccC
Confidence 999999998888886 8999999999999999999999999999999999999999999999999999999999998776
Q ss_pred C
Q 036361 484 E 484 (485)
Q Consensus 484 ~ 484 (485)
+
T Consensus 458 ~ 458 (523)
T PRK08316 458 E 458 (523)
T ss_pred C
Confidence 5
No 50
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-61 Score=483.28 Aligned_cols=448 Identities=26% Similarity=0.417 Sum_probs=366.6
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...++++.+++.+.++++|+++|+.+.++++||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|+
T Consensus 3 ~~~~~~~~~~~~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~~~~G~ 82 (528)
T PRK07470 3 SRRVMNLAHFLRQAARRFPDRIALVWGDRSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMFAAFRLGA 82 (528)
T ss_pred cccCCCHHHHHHHHHHHCCCceEEEECCccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhCCe
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++++++..+.+++..+++.+++++++++.+..+.......... ....++.++.... ...+.
T Consensus 83 ~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~~~ 144 (528)
T PRK07470 83 VWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVRAASP---DLTHVVAIGGARA---------------GLDYE 144 (528)
T ss_pred EEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHHhhCC---cCceEEEeCCCcc---------------cccHH
Confidence 99999999999999999999999999999876665544433222 2334444433210 11222
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh--CCCCCCEEEEecchhhHhHHHHH
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW--AVPKQPVYLWTLPMFHANGWGYT 247 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~ 247 (485)
++...............++++++++|||||||.||+|.++|+++...+......+ +..+.|+++...|++|..++..+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~ 224 (528)
T PRK07470 145 ALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIHQL 224 (528)
T ss_pred HHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHHHH
Confidence 2222211111112234568999999999999999999999999876554433322 46778999999999999998765
Q ss_pred HHHHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-c
Q 036361 248 WGMAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-S 322 (485)
Q Consensus 248 ~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~ 322 (485)
+ .+..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.. ....++++|.++++|+++++...+++. .
T Consensus 225 ~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~ 303 (528)
T PRK07470 225 C-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAGAPMYRADQKRALAK 303 (528)
T ss_pred H-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcCCCCCHHHHHHHHHH
Confidence 4 566777776664 578999999999999999999999999998765 234678999999999999999988887 5
Q ss_pred cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcc
Q 036361 323 MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCV 402 (485)
Q Consensus 323 ~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~ 402 (485)
++..+++.||+||+++.+..+...... .. .......+++|.|.+++ .++++|+ ++++++.| +.|||+++|+.+
T Consensus 304 ~g~~~~~~YG~TE~~~~~~~~~~~~~~--~~-~~~~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~i~~~~~ 376 (528)
T PRK07470 304 LGKVLVQYFGLGEVTGNITVLPPALHD--AE-DGPDARIGTCGFERTGM-EVQIQDD-EGRELPPG--ETGEICVIGPAV 376 (528)
T ss_pred hCcHHHHhCCCcccCCceeecchhhcc--cc-ccccceeeccCcccCCc-EEEEECC-CCCCCCCC--CceEEEEeCCcc
Confidence 688999999999998765543211000 00 00112345889999998 9999996 78899988 789999999999
Q ss_pred cccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCC
Q 036361 403 TVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFW 482 (485)
Q Consensus 403 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~ 482 (485)
+.||+++++.+...|. ++||+|||+|++++||.+++.||.+|++|++|.+++|.+||+.+.++++|.+++|++.+++..
T Consensus 377 ~~gy~~~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~ 455 (528)
T PRK07470 377 FAGYYNNPEANAKAFR-DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHPAVSEVAVLGVPDPVW 455 (528)
T ss_pred chhhcCCHHHHHhhhc-CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCCCceEEEEEeccCccc
Confidence 9999999999888876 899999999999999999999999999999999999999999999999999999999999877
Q ss_pred CC
Q 036361 483 GE 484 (485)
Q Consensus 483 g~ 484 (485)
|+
T Consensus 456 ~~ 457 (528)
T PRK07470 456 GE 457 (528)
T ss_pred Cc
Confidence 65
No 51
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.3e-60 Score=483.14 Aligned_cols=443 Identities=26% Similarity=0.381 Sum_probs=372.5
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
...+++.+.++++++.+|+++|+.+.++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 14 ~~~~n~~~~~~~~a~~~~~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~~a~~~~G~~ 93 (542)
T PRK07786 14 ARRQNWVNQLARHALMQPDAPALRFLGNTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESVLAANMLGAI 93 (542)
T ss_pred ccccCHHHHHHHHHHHCCCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeE
Confidence 34577999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|+++..+.+++..+++.+++++++++....+.+.......+ ....++..++... .....+.+
T Consensus 94 ~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------~~~~~~~~ 157 (542)
T PRK07786 94 AVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATAVRDIVP---LLSTVVVAGGSSD-------------DSVLGYED 157 (542)
T ss_pred EEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHHhhhccC---ccceEEEecCCCc-------------ccccCHHH
Confidence 9999999999999999999999999999877666544433222 3344554443211 11122333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCC-CCCCEEEEecchhhHhHHHHHHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAV-PKQPVYLWTLPMFHANGWGYTWG 249 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~ 249 (485)
++....... .......+++++++|||||||.||+|.++|+++..++......+++ ..++++++..|++|.+|+..++.
T Consensus 158 ~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 236 (542)
T PRK07786 158 LLAEAGPAH-APVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGIGSMLP 236 (542)
T ss_pred HhhccCCCC-CCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHHHHHHH
Confidence 332222111 1123445789999999999999999999999999888777777766 67889999999999999988899
Q ss_pred HHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC-CCCCCCceEEeccCCCChhhhhhhh-cc-C
Q 036361 250 MAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF-EPLKTPVQILTAGAPPPAPVLSRTE-SM-G 324 (485)
Q Consensus 250 ~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~ 324 (485)
++..|+++++.+ .+++..+++.++++++|.++++|+++..+...... ....++|.+++||+++++++++.+. .+ +
T Consensus 237 ~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~~~lr~i~~gg~~~~~~~~~~~~~~~~~ 316 (542)
T PRK07786 237 GLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARPRDLALRVLSWGAAPASDTLLRQMAATFPE 316 (542)
T ss_pred HHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCccCcceEEEEECCCCCCHHHHHHHHHHcCC
Confidence 999999999865 57999999999999999999999999999876521 2223689999999999999999988 45 7
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
.++++.||+||++.+.+.+... .......++|.|.++. .++|+|+ ++++++.| +.|||+++|+.++.
T Consensus 317 ~~l~~~YG~tE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~ 383 (542)
T PRK07786 317 AQILAAFGQTEMSPVTCMLLGE---------DAIRKLGSVGKVIPTV-AARVVDE-NMNDVPVG--EVGEIVYRAPTLMS 383 (542)
T ss_pred CeEEeeecccccccceEecCcc---------cccccCCCccccCCCc-eEEEECC-CCCCCcCC--CceEEEEEChhhhh
Confidence 8999999999998765543211 1112335789999998 9999995 78889888 88999999999999
Q ss_pred cccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 405 GYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||+++++.+...|. ++||+|||++++++||.++++||.+|+|+++|.++++.+||++|.++|.|.+++|++.+++..|+
T Consensus 384 gy~~~~~~~~~~f~-~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~~~~~ 462 (542)
T PRK07786 384 GYWNNPEATAEAFA-GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHPDIVEVAVIGRADEKWGE 462 (542)
T ss_pred hhcCCHHHHHHHhh-CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCccEEEEEeccCcccCc
Confidence 99999999988887 89999999999999999999999999999999999999999999999999999999998887665
No 52
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=2.9e-61 Score=493.45 Aligned_cols=438 Identities=18% Similarity=0.161 Sum_probs=347.2
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
.....+.++.++|+++++.+|+++|+.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++|++++|
T Consensus 33 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~l 112 (614)
T PRK08180 33 PLGDYPRRLTDRLVHWAQEAPDRVFLAERGADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLAL 112 (614)
T ss_pred CCCCcCccHHHHHHHHHHHCCCCceeeeccCCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 344567899999999999999999998752 689999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCC-----HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCC
Q 036361 83 GVPMSGAILNNINTRLD-----AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTS 157 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 157 (485)
||+++|++++|++|.++ .+++.++++.++++++|++.... +......... ....++..+.....
T Consensus 113 A~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~--~~~~~~~~~~--~~~~~i~~~~~~~~------- 181 (614)
T PRK08180 113 AAMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAA--FARALAAVVP--ADVEVVAVRGAVPG------- 181 (614)
T ss_pred HHHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHH--HHHHHhhhcc--CCceEEEecCCCCC-------
Confidence 99999999999999988 79999999999999999975311 1111111110 11223333221100
Q ss_pred CccccccccccccccccCCCC--CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCC--CCCEEE
Q 036361 158 PTVTVDFIDTYEGFVEEGDPK--YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVP--KQPVYL 233 (485)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~--~~~~~~ 233 (485)
.....+.++....... ........++++++|+|||||||.||+|++||+++..++......+... ..++++
T Consensus 182 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l 256 (614)
T PRK08180 182 -----RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLV 256 (614)
T ss_pred -----cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEE
Confidence 0012233333221111 0111234568999999999999999999999999998887776666653 568999
Q ss_pred EecchhhHhHHHH-HHHHHhhcceEeecc-cCCH---HHHHHHHHhcCceeeecchHHHHHHhCCC------CCCCCCCC
Q 036361 234 WTLPMFHANGWGY-TWGMAAVGATNICLR-RFDA---SAISDLIQKHNVTHMCGAPVVLNMISNSP------DFEPLKTP 302 (485)
Q Consensus 234 ~~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~---~~~~~~i~~~~~t~~~~~p~~~~~l~~~~------~~~~l~~l 302 (485)
+.+|++|.+++.. ++.++..|+++++.+ .+++ ..+++.++++++|+++++|.+++.|++.. ....++++
T Consensus 257 ~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~l 336 (614)
T PRK08180 257 DWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAALRRRFFSRL 336 (614)
T ss_pred EecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchhhhhhhccce
Confidence 9999999998754 677889999998876 3444 46788899999999999999999987642 12346899
Q ss_pred ceEEeccCCCChhhhhhhhc-----c--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeE
Q 036361 303 VQILTAGAPPPAPVLSRTES-----M--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVD 375 (485)
Q Consensus 303 r~i~~~g~~l~~~~~~~~~~-----~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 375 (485)
|.+++||+++++++.+++++ + ++++++.||+||++++++..... ....+++|+|.+++ +++
T Consensus 337 r~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~v~ 404 (614)
T PRK08180 337 KLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMTETAPSATFTTGP-----------LSRAGNIGLPAPGC-EVK 404 (614)
T ss_pred eEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeecccccCCceEecccc-----------cCCCCcccCccCCc-EEE
Confidence 99999999999999998874 2 36899999999998766543211 11246899999998 999
Q ss_pred EecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEE----ecCceEEEEccCCceEE-eC
Q 036361 376 VVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVM----HVDGYVEIKDRSKDVII-SG 450 (485)
Q Consensus 376 i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~----~~~g~l~~~gR~~~~i~-~~ 450 (485)
+++++ ..|||+++|++++.||+++++.+...|..+|||+|||+|++ |+||.++|+||.+|+|+ .+
T Consensus 405 i~d~~----------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~ 474 (614)
T PRK08180 405 LVPVG----------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSS 474 (614)
T ss_pred EecCC----------CCcEEEEecCccchhhcCChhHhHhhcccCCceeccceEEecCCcCCCCceEEecchhhhEEcCC
Confidence 98851 45999999999999999999999998877899999999999 46899999999999888 68
Q ss_pred Ceeec--hHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 451 GENIC--SAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 451 G~~i~--~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
|++++ +.|+|.++.+||.|.+|+|++.+++..|
T Consensus 475 G~~i~~~p~Eie~~l~~~p~V~~a~V~g~~~~~~~ 509 (614)
T PRK08180 475 GTWVSVGPLRARAVSAGAPLVQDVVITGHDRDEIG 509 (614)
T ss_pred CcEecchhhhHHHHhhcCchhheEEEEcCCCCceE
Confidence 98777 7788899999999999999999987654
No 53
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-60 Score=480.83 Aligned_cols=458 Identities=30% Similarity=0.465 Sum_probs=368.0
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeC--C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYN--N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~--~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
+.+.+.++.++|++.+..+|+..++.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la~ 84 (539)
T PRK07008 5 MMDMPLLISSLIAHAARHAGDTEIVSRRVEGDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYGV 84 (539)
T ss_pred cccCCCCHHHHHHHHHhhCCCceEEEeeccCcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHH
Confidence 4445678999999999999999888752 2 68999999999999999999999999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
+++|++++|++|..+.+++..+++.+++++++++.+..+.+.+...... ....++...+..... .. . ..
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~-~------~~ 153 (539)
T PRK07008 85 SGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAPQCP---NVKGWVAMTDAAHLP-AG-S------TP 153 (539)
T ss_pred HhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHhhCC---CceEEEEEccCCccc-cC-C------cc
Confidence 9999999999999999999999999999999999877666555544332 333444443322100 00 0 11
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHH--HHHHhCCCCCCEEEEecchhhHh
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTAN--ALIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
...++++......... .....++++++++|||||||.||+|++||+++..+... ....+++.++|++++..|++|.+
T Consensus 154 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 232 (539)
T PRK07008 154 LLCYETLVGAQDGDYD-WPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVN 232 (539)
T ss_pred cccHHHHhcccCCCcC-cccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhh
Confidence 2233333322222211 12345678999999999999999999999998754332 33456778899999999999998
Q ss_pred HHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhh
Q 036361 243 GWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSR 319 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~ 319 (485)
++...+.++..|+++++.+ .+++..+++.++++++|++.++|+++..+.+.. ....++++|.++++|+++++++.++
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~ 312 (539)
T PRK07008 233 AWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREAGLRFSTLRRTVIGGSACPPAMIRT 312 (539)
T ss_pred hHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHH
Confidence 8877788889999988874 589999999999999999999999999998765 3346789999999999999999999
Q ss_pred hh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 320 TE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 320 ~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
+. .+++++++.||+||++..++.+.........+.+.......++|+|.+++ .++|+|+ ++++++.++.+.|||+++
T Consensus 313 ~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~-~~~i~d~-~~~~~~~~~~~~Gei~v~ 390 (539)
T PRK07008 313 FEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGV-DMKIVGD-DGRELPWDGKAFGDLQVR 390 (539)
T ss_pred HHHHhCCceecccccccccccceecccccccccCCchhhhhhcccCCccccce-EEEEECC-CCCccCCCCCcceEEEEe
Confidence 97 67999999999999987665443221111111122222346789999998 9999996 677787654367999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|++++.||++++. ..+. ++||+|||+|++++||.+++.||.+|+|+.+|.+++|.+||+.+..+|.|.+++|++.+
T Consensus 391 g~~~~~gy~~~~~---~~~~-~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~v~~~~v~~~~ 466 (539)
T PRK07008 391 GPWVIDRYFRGDA---SPLV-DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIENVAVAHPAVAEAACIACA 466 (539)
T ss_pred CCccchhhcCChh---hhhc-CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHHHHHhCCceeEEEEEecC
Confidence 9999999999874 3344 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 467 ~~~~~~ 472 (539)
T PRK07008 467 HPKWDE 472 (539)
T ss_pred Cchhcc
Confidence 987665
No 54
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=2.4e-60 Score=479.49 Aligned_cols=444 Identities=25% Similarity=0.322 Sum_probs=373.6
Q ss_pred chhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEec
Q 036361 15 TTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 94 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l 94 (485)
+++++|+..++.+|+++|+.+.++++||+||.+++.++|+.|++.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 80 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHHDRTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAALAGGVFVPI 80 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCEEEEeC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccccc
Q 036361 95 NTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEE 174 (485)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (485)
++..+.+++..+++.++++++|++....+.+......+. ....++.+++....... ......|+++...
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~ 149 (515)
T TIGR03098 81 NPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGCH---DLRTLILVGEPAHASEG--------GGESPSWPKLLAL 149 (515)
T ss_pred CCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhccc---ccceEEEecCcccccCC--------ccccccHHHhhcc
Confidence 999999999999999999999999877665554443332 34455555543211111 0111223333322
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhc
Q 036361 175 GDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVG 254 (485)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G 254 (485)
.... ...+...+++++++|||||||.||+|.+||+++..++......+.+..+|++++.+|++|.+++..++.++..|
T Consensus 150 ~~~~--~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G 227 (515)
T TIGR03098 150 GDAD--PPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFNQLTTAFYVG 227 (515)
T ss_pred cccc--ccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHHHHHHHHHcC
Confidence 2111 11223467899999999999999999999999998888877778889999999999999999998889999999
Q ss_pred ceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhhhhhhc-c-CCeeeecc
Q 036361 255 ATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVLSRTES-M-GFVVCHGY 331 (485)
Q Consensus 255 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~i~~~Y 331 (485)
+++++.+.+++..+++.++++++|++.++|+++..|.+.. ....++++|.++++|+++++.+.+.+++ + +..+++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~Y 307 (515)
T TIGR03098 228 ATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLDWPESAAPSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMY 307 (515)
T ss_pred CEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcccCCCCccceEEEEecCCcCCHHHHHHHHHHCCCCeEeeee
Confidence 9999998899999999999999999999999999998754 2246778999999999999999999984 5 78899999
Q ss_pred CCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChh
Q 036361 332 GLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKE 411 (485)
Q Consensus 332 g~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~ 411 (485)
|+||++....... ........++|++.+++ +++|+++ ++++++.| +.|||+++|+.++.||+++++
T Consensus 308 G~tE~~~~~~~~~----------~~~~~~~~~vG~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~gy~~~~~ 373 (515)
T TIGR03098 308 GLTEAFRSTYLPP----------EEVDRRPDSIGKAIPNA-EVLVLRE-DGSECAPG--EEGELVHRGALVAMGYWNDPE 373 (515)
T ss_pred ccccccceEeccc----------ccccCCCCCcceecCCC-EEEEECC-CCCCCCCC--CceEEEEcCchhhccccCCch
Confidence 9999975433211 11122346899999998 9999995 78888888 789999999999999999988
Q ss_pred hhcccccC-----------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 412 STRRCISD-----------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 412 ~~~~~~~~-----------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
.+...|.+ ++||+|||+|++++||.+++.||.+|+|+.+|.+++|.+||+++.++|.|.+++|++.+++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~~~ 453 (515)
T TIGR03098 374 KTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVAYATGLVAEAVAFGVPDP 453 (515)
T ss_pred hhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHHhcCCCeeEEEEEeccCc
Confidence 87666542 3489999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCC
Q 036361 481 FWGET 485 (485)
Q Consensus 481 ~~g~~ 485 (485)
..|++
T Consensus 454 ~~g~~ 458 (515)
T TIGR03098 454 TLGQA 458 (515)
T ss_pred ccCce
Confidence 88763
No 55
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.1e-60 Score=484.27 Aligned_cols=453 Identities=29% Similarity=0.428 Sum_probs=370.0
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhh
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVP 85 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~ 85 (485)
.+.....++.++|++.++.+|+++|+.+ .++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+
T Consensus 10 ~~~~~~~~l~~~l~~~~~~~~~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~ 89 (559)
T PRK08315 10 DVPLLEQTIGQLLDRTAARYPDREALVYRDQGLRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQFATA 89 (559)
T ss_pred cCChhhccHHHHHHHHHHHCCCCeEEEEcCCCeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHH
Confidence 4456667899999999999999999988 45789999999999999999999999999999999999999999999999
Q ss_pred ccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH-----HHHHHhccCCC----------CCCCCeEEEecCCccc
Q 036361 86 MSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS-----LVLEALSLFPR----------DTKRPHLVLVDDDAAA 150 (485)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~-----~~~~~~~~~~~----------~~~~~~~i~~~~~~~~ 150 (485)
++|++++|++|..+.+++..+++.+++++++++.+... .+.+....... ......++..+....
T Consensus 90 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (559)
T PRK08315 90 KIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGDEKH- 168 (559)
T ss_pred HhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecccCC-
Confidence 99999999999999999999999999999999875421 12222111100 001122333222110
Q ss_pred ccCccCCCccccccccccccccccCC----C-CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC
Q 036361 151 SSTTTTSPTVTVDFIDTYEGFVEEGD----P-KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA 225 (485)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~ 225 (485)
.....+.++..... . ..........+++++++|||||||.||+|.++|+++..++......+.
T Consensus 169 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~ 236 (559)
T PRK08315 169 ------------PGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMK 236 (559)
T ss_pred ------------cccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcC
Confidence 11112222221110 0 011112345678999999999999999999999999988888888888
Q ss_pred CCCCCEEEEecchhhHhHHHH-HHHHHhhcceEeec-ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCC
Q 036361 226 VPKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICL-RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKT 301 (485)
Q Consensus 226 ~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~ 301 (485)
+.++++++...|++|..++.. ++.++..|+++++. ..+++..+++.++++++|+++++|+++..++... ....+++
T Consensus 237 ~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~ 316 (559)
T PRK08315 237 LTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHPDFARFDLSS 316 (559)
T ss_pred CCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCcccCCCCchh
Confidence 999999999999999998865 67888889998854 4689999999999999999999999998887655 3346789
Q ss_pred CceEEeccCCCChhhhhhhh-ccCC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecC
Q 036361 302 PVQILTAGAPPPAPVLSRTE-SMGF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNP 379 (485)
Q Consensus 302 lr~i~~~g~~l~~~~~~~~~-~~~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~ 379 (485)
+|.++++|+++++++++.+. .++. ++++.||+||++.+++.+.... .......++|.|.++. +++|+|+
T Consensus 317 lr~~~~~G~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~--------~~~~~~~~vG~p~~~~-~v~i~d~ 387 (559)
T PRK08315 317 LRTGIMAGSPCPIEVMKRVIDKMHMSEVTIAYGMTETSPVSTQTRTDD--------PLEKRVTTVGRALPHL-EVKIVDP 387 (559)
T ss_pred hheeEecCCCCCHHHHHHHHHHcCCcceeEEEcccccccceeecCccc--------chhhccCCCCccCCCc-EEEEEcC
Confidence 99999999999999999888 4554 5999999999987655443211 1112346889999998 9999998
Q ss_pred CCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHH
Q 036361 380 ETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEV 459 (485)
Q Consensus 380 ~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~i 459 (485)
+++++++.| +.|||+++|++++.||+++++.+...+..++||+|||+|++++||.++++||.+|+++++|.++++.+|
T Consensus 388 ~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~dg~~~~~GR~d~~i~~~G~~v~~~eI 465 (559)
T PRK08315 388 ETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEAIDADGWMHTGDLAVMDEEGYVNIVGRIKDMIIRGGENIYPREI 465 (559)
T ss_pred ccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhcCCCCCCEEccceEEEcCCceEEEEeeccceEEECCEEEcHHHH
Confidence 779999998 889999999999999999999988888668999999999999999999999999999999999999999
Q ss_pred HHHHhcCcCcceeEEEeccCCCCCC
Q 036361 460 ESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 460 e~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
|++|.++++|.+++|++.+++..|+
T Consensus 466 E~~l~~~~~v~~~~v~~~~~~~~~~ 490 (559)
T PRK08315 466 EEFLYTHPKIQDVQVVGVPDEKYGE 490 (559)
T ss_pred HHHHHhCCCceEEEEEecCCCCCCe
Confidence 9999999999999999999886554
No 56
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=7.9e-61 Score=485.12 Aligned_cols=442 Identities=26% Similarity=0.391 Sum_probs=361.9
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...++.+++.++++.+|+++|+.+. ++.+||.||.+++.++|+.|++.|+++||+|+++++|+++++++++||+++|+
T Consensus 26 ~~~~~~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~ 105 (546)
T PLN02330 26 DKLTLPDFVLQDAELYADKVAFVEAVTGKAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEYGIVALGIMAAGG 105 (546)
T ss_pred CCCcHHHHHhhhhhcCCCccEEEecCCCCcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHhCc
Confidence 3578999999999999999999874 57899999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++.++++.+++++++++....+.+... . ..++.++.... .....|.
T Consensus 106 ~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~--------~-~~~i~~~~~~~-------------~~~~~~~ 163 (546)
T PLN02330 106 VFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL--------G-LPVIVLGEEKI-------------EGAVNWK 163 (546)
T ss_pred EeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc--------C-CcEEEecCCCC-------------CCcccHH
Confidence 999999999999999999999999999998776655332 1 12333332210 1112222
Q ss_pred cccccCCCC--CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC--CCCCCEEEEecchhhHhHHH
Q 036361 170 GFVEEGDPK--YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA--VPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~ 245 (485)
+++...... ........++++++++|||||||.||+|.++|+++..+.......+. ....++.+..+|++|.+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~ 243 (546)
T PLN02330 164 ELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGIT 243 (546)
T ss_pred HHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHH
Confidence 222221111 11112244678999999999999999999999999876543322121 12346789999999999876
Q ss_pred H-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCC--CCceEEeccCCCChhhhhhh
Q 036361 246 Y-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLK--TPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 246 ~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~--~lr~i~~~g~~l~~~~~~~~ 320 (485)
. ++.++..|+++++.+.+++..+++.++++++|.+.++|+++..+..... ...+. .+|.++++|+++++++.+++
T Consensus 244 ~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~i~~~g~~l~~~~~~~~ 323 (546)
T PLN02330 244 GICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKNPIVEEFDLSKLKLQAIMTAAAPLAPELLTAF 323 (546)
T ss_pred HHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhCccccccccchheeeeEEEcCCcCCHHHHHHH
Confidence 5 6778889999999999999999999999999999999999999987642 22333 47889999999999999999
Q ss_pred h-cc-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 321 E-SM-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 321 ~-~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
. .+ ++++++.||+||++.+...+..... ........++|.|.+++ +++|+|+++++++++| +.|||+++
T Consensus 324 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~------~~~~~~~~~vG~~~~~~-~v~i~d~~~~~~~p~g--~~Gel~v~ 394 (546)
T PLN02330 324 EAKFPGVQVQEAYGLTEHSCITLTHGDPEK------GHGIAKKNSVGFILPNL-EVKFIDPDTGRSLPKN--TPGELCVR 394 (546)
T ss_pred HHHcCCCeEEecccccccccceecCCCccc------cccccccCccccccCCc-EEEEEeCCCCccCCCC--CceEEEEe
Confidence 8 55 8999999999999865543321110 00011235789999998 9999998789999999 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|++++.||+++++.+...+..++||+|||+|++++||.++++||.+|+|+++|++|++.+||+.+.++++|.+++|++.+
T Consensus 395 g~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~ 474 (546)
T PLN02330 395 SQCVMQGYYNNKEETDRTIDEDGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDAAVVPLP 474 (546)
T ss_pred cchhhhhhccCccchhhhccCCCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHHHHHhCCchheEEEEecc
Confidence 99999999999998888887789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 475 ~~~~g~ 480 (546)
T PLN02330 475 DEEAGE 480 (546)
T ss_pred ccccCc
Confidence 988776
No 57
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-60 Score=482.92 Aligned_cols=448 Identities=22% Similarity=0.283 Sum_probs=357.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...++.++|+++++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 14 ~~~~l~~~l~~~a~~~p~~~ai~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 93 (534)
T PRK05852 14 FGPRIADLVEVAATRLPEAPALVVTADRIAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVALLAASRADL 93 (534)
T ss_pred hcccHHHHHHHHHHhCCCCcEEEecCCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCc
Confidence 44678999999999999999998754 5799999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++.++++.++++++|++............ . .....+.+......... .....+.
T Consensus 94 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~---------~~~~~~~ 159 (534)
T PRK05852 94 VVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT--R---WWPLTVNVGGDSGPSGG---------TLSVHLD 159 (534)
T ss_pred EEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc--c---ccceeeeeccccccccc---------ccccccc
Confidence 99999999999999999999999999998643321110000 0 01111222111100000 0000000
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HH
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TW 248 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~ 248 (485)
... .............++.++++|||||||.||+|.++|+++..++......+.+..+|++++..|++|..++.. ++
T Consensus 160 ~~~--~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~ 237 (534)
T PRK05852 160 AAT--EPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAALL 237 (534)
T ss_pred ccc--CCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHHHH
Confidence 000 000000111123468899999999999999999999999988888888888999999999999999999876 67
Q ss_pred HHHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC----CCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 249 GMAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD----FEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 249 ~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
.++..|+++++.+ .+++..+++.++++++|.++++|++++.|.+... ....+++|.++++|+++++.+++.+.
T Consensus 238 ~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~G~~~~~~~~~~~~~ 317 (534)
T PRK05852 238 ATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEPSGRKPAALRFIRSCSAPLTAETAQALQT 317 (534)
T ss_pred HHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhcccccccccCCCeeEEEECCCCCCHHHHHHHHH
Confidence 7788888877754 4789999999999999999999999999987652 23467899999999999999999988
Q ss_pred ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCc
Q 036361 322 SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGC 401 (485)
Q Consensus 322 ~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~ 401 (485)
.++..+++.||+||++..++............. ....+.+|. .++. +++++|+ +++++++| +.|||+++|++
T Consensus 318 ~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~---~~~~g~~g~-~~g~-~~~i~d~-~g~~~~~g--~~Gel~v~g~~ 389 (534)
T PRK05852 318 EFAAPVVCAFGMTEATHQVTTTQIEGIGQTENP---VVSTGLVGR-STGA-QIRIVGS-DGLPLPAG--AVGEVWLRGTT 389 (534)
T ss_pred HhCCChhhccCccccchhhhcCCccccccccCc---ccccccCCC-CCCC-eEEEECC-CCCCCCCC--CceEEEEecCc
Confidence 579999999999999876654322110000000 011123343 6787 9999996 68899998 88999999999
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...|. ++||+|||+|++|+||++++.||.+|+|+.+|.+++|.+||+++.++|+|.+|+|++.+++.
T Consensus 390 v~~gY~~~~~~t~~~~~-~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~~~~~V~~~~v~g~~~~~ 468 (534)
T PRK05852 390 VVRGYLGDPTITAANFT-DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLASHPNVMEAAVFGVPDQL 468 (534)
T ss_pred ccchhcCCcccchhhhc-CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHHhCCCeeeEEEEecCCcC
Confidence 99999999999988887 89999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 036361 482 WGE 484 (485)
Q Consensus 482 ~g~ 484 (485)
.|+
T Consensus 469 ~g~ 471 (534)
T PRK05852 469 YGE 471 (534)
T ss_pred cCc
Confidence 776
No 58
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.2e-61 Score=498.80 Aligned_cols=418 Identities=21% Similarity=0.298 Sum_probs=349.1
Q ss_pred cchhHHHHHHHhh--cCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 14 LTTLGFLERAATA--YSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 14 ~tl~~~l~~~a~~--~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
.++.++|.++++. +||++|+.+. ..+||+||+++++++|+.|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~-~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~~~aG~~~ 82 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA-DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLLACLARGVMA 82 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec-CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhCcEE
Confidence 3788999998886 7999999875 489999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|++|..+.+++.++++.++++++|++.+....+.. ..++..... +...
T Consensus 83 vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~-----------~~~~~~~~~--------------------~~~~ 131 (705)
T PRK06060 83 FLANPELHRDDHALAARNTEPALVVTSDALRDRFQP-----------SRVAEAAEL--------------------MSEA 131 (705)
T ss_pred EecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhcc-----------cccchhhhh--------------------hhhc
Confidence 999999999999999999999999998654332210 000000000 0000
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH-HHhCCCCCCEEEEecchhhHhHHHH-HHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL-IDWAVPKQPVYLWTLPMFHANGWGY-TWG 249 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 249 (485)
.. .......+..++++++++|||||||.||+|+++|+++..+..+.. ..+.+.+.+++++..|++|.+++.. ++.
T Consensus 132 ~~---~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~ 208 (705)
T PRK06060 132 AR---VAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWF 208 (705)
T ss_pred cc---cCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHH
Confidence 00 000011123567899999999999999999999999988776554 4577888999999999999988754 678
Q ss_pred HHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhc-c-CCe
Q 036361 250 MAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTES-M-GFV 326 (485)
Q Consensus 250 ~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~ 326 (485)
++..|+++++.+ .+++..+...++++++|+++++|+++..+.+......++++|.+++||+++++++.+++.+ + +.+
T Consensus 209 ~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~slr~i~~gGe~l~~~~~~~~~~~~~~~~ 288 (705)
T PRK06060 209 PLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSPDSFRSLRCVVSAGEALELGLAERLMEFFGGIP 288 (705)
T ss_pred HHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcccccccceeEEEEecCcCCHHHHHHHHHHcCCCc
Confidence 889999999887 5788899999999999999999999999987655556789999999999999999999884 5 589
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++..+..+.... ....++|+|.+++ +++|+|+ +++++++| +.|||+++|++++.||
T Consensus 289 ~~~~YG~tE~~~~~~~~~~~~-----------~~~~~iG~p~~~~-~v~i~d~-~g~~~~~g--~~GEl~i~g~~v~~GY 353 (705)
T PRK06060 289 ILDGIGSTEVGQTFVSNRVDE-----------WRLGTLGRVLPPY-EIRVVAP-DGTTAGPG--VEGDLWVRGPAIAKGY 353 (705)
T ss_pred eEeeeeccccCceEEeccCCC-----------CCcCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEccchhhhhh
Confidence 999999999986554332110 1235789999998 9999996 68889998 8899999999999999
Q ss_pred cCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 407 FKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+++++.+. ..++||+|||+|++++||+++++||.+|+||++|++|++.+||.+|.++++|.+++|++.+++..|+
T Consensus 354 ~~~~~~~~---~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~a~vv~~~~~~~~~ 428 (705)
T PRK06060 354 WNRPDSPV---ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAEAAVVAVRESTGAS 428 (705)
T ss_pred hCCCcccc---cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeEEEEEeecCccCCe
Confidence 99887643 3478999999999999999999999999999999999999999999999999999999999887654
No 59
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.8e-60 Score=476.70 Aligned_cols=460 Identities=29% Similarity=0.464 Sum_probs=370.2
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEe--CC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVY--NN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~--~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
+...+.++.++|+++++.+|+++++.. .+ +++||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~la~ 84 (542)
T PRK06018 5 MQDWPLLCHRIIDHAARIHGNREVVTRSVEGPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAWYGI 84 (542)
T ss_pred hhcCCCCHHHHHHHHHHhCCCceEEEeeccCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 345678999999999999999999985 22 78999999999999999999999999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
+++|++++|+++..+.+++..+++.+++++++++.+..+.+.+...... ....++...+...... . ....
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~------~~~~ 154 (542)
T PRK06018 85 MGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADKLP---SVERYVVLTDAAHMPQ-T------TLKN 154 (542)
T ss_pred HhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhhCC---CccEEEEecccccccc-c------Cccc
Confidence 9999999999999999999999999999999999888777766554433 3344444433211000 0 0011
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHH--HHHHHHHhCCCCCCEEEEecchhhHh
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFIL--TANALIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
...+.++........ ......++++++++|||||||.||+|.+||++++.. .......+++..+|+++...|++|.+
T Consensus 155 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~ 233 (542)
T PRK06018 155 AVAYEEWIAEADGDF-AWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHAN 233 (542)
T ss_pred cccHHHHhccCCccc-CcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHh
Confidence 122333333222221 112345678999999999999999999999975332 22234456788899999999999999
Q ss_pred HHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhh
Q 036361 243 GWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSR 319 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~ 319 (485)
++...+.++..|+++++.. .+++..+++.++++++|.+.++|++++.+.+... ...++++|.++++|+++++++.++
T Consensus 234 ~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~ 313 (542)
T PRK06018 234 SWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEGLKLPHLKMVVCGGSAMPRSMIKA 313 (542)
T ss_pred hhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccCCCcccceEEEEcCCCCCHHHHHH
Confidence 9887778889999988764 5789999999999999999999999999987652 345678999999999999999999
Q ss_pred hhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 320 TESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 320 ~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
++++++++++.||+||++.+++.+...........+.......++|.|.+++ +++|+|+ ++++++.++...|||+++|
T Consensus 314 ~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~-~i~v~d~-~~~~~~~~~~~~Gel~i~g 391 (542)
T PRK06018 314 FEDMGVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGV-EMKITDD-AGKELPWDGKTFGRLKVRG 391 (542)
T ss_pred HHHhCCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCc-EEEEECC-CCCCCCCCCCceeEEEEec
Confidence 9888999999999999987766554333222222233233345789999998 9999996 7788876433679999999
Q ss_pred CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 400 GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
++++.||+++. ...+..++||+|||+++++++|.+++.||.+|+|+.+|.++++.+||.++.++|+|.+|+|++.++
T Consensus 392 ~~~~~gy~~~~---~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~ 468 (542)
T PRK06018 392 PAVAAAYYRVD---GEILDDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSIDLENLAVGHPKVAEAAVIGVYH 468 (542)
T ss_pred CCcchhhhcCc---ccEecCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHHHHHHHHhCCcceeEEEEeccC
Confidence 99999999832 234445889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC
Q 036361 480 KFWGE 484 (485)
Q Consensus 480 ~~~g~ 484 (485)
+..|+
T Consensus 469 ~~~~~ 473 (542)
T PRK06018 469 PKWDE 473 (542)
T ss_pred CCcCc
Confidence 87665
No 60
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=6.7e-60 Score=476.06 Aligned_cols=443 Identities=22% Similarity=0.322 Sum_probs=362.8
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
.++.++++++++++|+++|+++.+ +++||.||.++++++|+.|.++|+++||+|+++++|+.++++++|||+++|
T Consensus 7 ~~l~~~~~~~a~~~p~~~a~~~~~~~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la~~~~G 86 (517)
T PRK08008 7 QHLRQMWDDLADVYGHKTALIFESSGGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFGLAKIG 86 (517)
T ss_pred ccHHHHHHHHHHHCCCceEEEcccCCCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcC
Confidence 579999999999999999999764 689999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++++++++..+.+++..+++.++++.+|++.+....+.++...... ..+.++..+...... .....+
T Consensus 87 ~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----------~~~~~~ 153 (517)
T PRK08008 87 AIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDAT--PLRHICLTRVALPAD-----------DGVSSF 153 (517)
T ss_pred eEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccc--cCcEEEEecCCCccc-----------ccccCH
Confidence 9999999999999999999999999999998877766665433221 233444443321100 111222
Q ss_pred ccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-H
Q 036361 169 EGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-T 247 (485)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~ 247 (485)
++.............+..++++++++|||||||.||+|.++|+++............+..++++++.+|++|..+... +
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 233 (517)
T PRK08008 154 TQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAA 233 (517)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHHHH
Confidence 222222111111122345689999999999999999999999999865543333345788999999999999876654 7
Q ss_pred HHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhh-ccC
Q 036361 248 WGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTE-SMG 324 (485)
Q Consensus 248 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~ 324 (485)
+.++..|+++++.+.+++..+++.++++++|++.++|++++.+..... ......++.+.++ ..++++....+. .++
T Consensus 234 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~ 312 (517)
T PRK08008 234 MAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPPSANDRQHCLREVMFY-LNLSDQEKDAFEERFG 312 (517)
T ss_pred HHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCccccccccceeeEEe-cCCCHHHHHHHHHHhC
Confidence 788889999999999999999999999999999999999999876542 2234567777665 478888888877 569
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec---Cc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG---GC 401 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~---~~ 401 (485)
+++++.||+||+++.++...... .....++|.|.+++ +++|+|+ ++++++.| +.|||+++| ++
T Consensus 313 ~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~g~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~ 378 (517)
T PRK08008 313 VRLLTSYGMTETIVGIIGDRPGD----------KRRWPSIGRPGFCY-EAEIRDD-HNRPLPAG--EIGEICIKGVPGKT 378 (517)
T ss_pred CeEEeeccccccccccccCCccc----------cccCCccccCCCCc-EEEEECC-CCCCCCCC--CcceEEEeCCCCcc
Confidence 99999999999986555432111 11235789999998 9999995 78999998 889999998 68
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...|..++||+|||+|++++||.++++||.+|+||.+|++++|.+||.++..++.|.+++|++.+++.
T Consensus 379 ~~~gy~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE~~l~~~~~v~~~~v~g~~~~~ 458 (517)
T PRK08008 379 IFKEYYLDPKATAKVLEADGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSI 458 (517)
T ss_pred hhhhHhCChHHHhhcccCCCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHHHHHHhCCceeeEEEEccCCCC
Confidence 99999999999999888799999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCC
Q 036361 482 WGE 484 (485)
Q Consensus 482 ~g~ 484 (485)
.++
T Consensus 459 ~~~ 461 (517)
T PRK08008 459 RDE 461 (517)
T ss_pred CCc
Confidence 654
No 61
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.3e-60 Score=474.62 Aligned_cols=430 Identities=30% Similarity=0.438 Sum_probs=362.0
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
+++.++|+++++.+|+++|+.+.++++||.||.+++.++|++|.+.|+++|++|+++++|+++++++++||+++|++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~a~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~ 81 (497)
T PRK06145 2 FNLSASIAFHARRTPDRAALVYRDQEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFAASYLGAVFLP 81 (497)
T ss_pred ccHHHHHHHHHHHCCCceEEEECCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcEEEe
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++..+++.+++++++++.+...... .....+.++..... .+..+..
T Consensus 82 l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~----------------~~~~~~~ 135 (497)
T PRK06145 82 INYRLAADEVAYILGDAGAKLLLVDEEFDAIVA----------LETPKIVIDAAAQA----------------DSRRLAQ 135 (497)
T ss_pred cccccCHHHHHHHHHhcCCcEEEEccchhhhhh----------cccceEEecCcccc----------------hhHHHhc
Confidence 999999999999999999999999876543211 01122222211100 0000000
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAA 252 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~ 252 (485)
............++++++++|||||||.||+|+++|+++...+......+++..+++++...|++|.+++.. .+.++.
T Consensus 136 -~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 214 (497)
T PRK06145 136 -GGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLW 214 (497)
T ss_pred -cCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHh
Confidence 000011112345679999999999999999999999999877766666778899999999999999988865 567888
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc-CCeee
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFVVC 328 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~i~ 328 (485)
.|+++++.+.+++..+++.++++++|.+.++|+++..++... ....++++|.+++||+++++++++.+. .+ +..++
T Consensus 215 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~ 294 (497)
T PRK06145 215 VGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDRDRFDLDSLAWCIGGGEKTPESRIRDFTRVFTRARYI 294 (497)
T ss_pred ccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCccccccccceEEEecCCCCCHHHHHHHHHHcCCCceE
Confidence 999999998899999999999999999999999999998765 234567899999999999999999988 45 67899
Q ss_pred eccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccC
Q 036361 329 HGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFK 408 (485)
Q Consensus 329 ~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~ 408 (485)
+.||+||+++.++...... .....+++|.|.++. .+++.|+ ++..+++| +.|||+++|++++.||++
T Consensus 295 ~~YG~tE~~~~~~~~~~~~---------~~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~~--~~Gel~v~g~~~~~Gy~~ 361 (497)
T PRK06145 295 DAYGLTETCSGDTLMEAGR---------EIEKIGSTGRALAHV-EIRIADG-AGRWLPPN--MKGEICMRGPKVTKGYWK 361 (497)
T ss_pred EeecCcccCCcceeccCcc---------ccccCCCcccCCCCc-eEEEECC-CCCCCCCC--CceEEEEECcchhhhhcC
Confidence 9999999987554322111 011235789999998 9999996 78888888 889999999999999999
Q ss_pred ChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 409 DKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+++.+...|. ++||+|||+|++++||.++++||.+|+||++|+++++.+||+.|.++|+|.+++|++.+++..|+
T Consensus 362 ~~~~~~~~~~-~~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 436 (497)
T PRK06145 362 DPEKTAEAFY-GDWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAEAAVIGVHDDRWGE 436 (497)
T ss_pred ChHHHHHHHh-CCCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEecCCCccCc
Confidence 9999988887 89999999999999999999999999999999999999999999999999999999999987765
No 62
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.1e-59 Score=473.25 Aligned_cols=434 Identities=27% Similarity=0.378 Sum_probs=367.8
Q ss_pred CcchhHHHHHHHhhcCCCcEEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~-~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
..++.+++..++ .+|+++|+.+ .++.+||.||.++++++|+.|++.|+++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~l~~~~~~~~-~~~~~~a~~~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~~~~G~~~ 80 (504)
T PRK07514 2 NNNLFDALRAAF-ADRDAPFIETPDGLRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLATLRAGAVF 80 (504)
T ss_pred CccHHHHHHHHh-hCCCCeEEEeCCCCEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 457889999999 9999999988 56789999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|+++..+.+++..+++.+++++++++....+.+........ ...++.++.... ..+.+.
T Consensus 81 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~----------------~~~~~~ 140 (504)
T PRK07514 81 LPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAAAG----APHVETLDADGT----------------GSLLEA 140 (504)
T ss_pred EECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhccC----CceEEEecCCCc----------------ccHHHh
Confidence 999999999999999999999999999887766555433221 222443332211 001111
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGM 250 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~ 250 (485)
...... ........++++++++|||||||.||+|.++|+++...+......+.+.+++++++..|++|..++.. ++.+
T Consensus 141 ~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 219 (504)
T PRK07514 141 AAAAPD-DFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVA 219 (504)
T ss_pred hhhcCc-ccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHH
Confidence 111111 11112345789999999999999999999999999998888877888999999999999999998865 6788
Q ss_pred HhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-ccCCee
Q 036361 251 AAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVV 327 (485)
Q Consensus 251 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i 327 (485)
+..|+++++.+.+++..+++.+ .++|.+..+|.++..++... ....++++|.+++||+++++++.+.+. .++.++
T Consensus 220 l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~~~~~ 297 (504)
T PRK07514 220 LLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQEPRLTREAAAHMRLFISGSAPLLAETHREFQERTGHAI 297 (504)
T ss_pred HhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcCCCCCcccccceeeEEecCCCCCHHHHHHHHHHhCCcc
Confidence 8999999999989999999999 47999999999999988765 344578899999999999999999998 568899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++....... . ......++|.|.+++ +++|+|++++++++.| +.|||+++|++++.||+
T Consensus 298 ~~~YG~tE~~~~~~~~~-~----------~~~~~~~~G~~~~~~-~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy~ 363 (504)
T PRK07514 298 LERYGMTETNMNTSNPY-D----------GERRAGTVGFPLPGV-SLRVTDPETGAELPPG--EIGMIEVKGPNVFKGYW 363 (504)
T ss_pred eeecccccccccccCCc-c----------ccccCcccccCCCCc-EEEEEECCCCCCCCCC--CceEEEEecCCcccccc
Confidence 99999999975543211 0 011235789999998 9999998899999988 88999999999999999
Q ss_pred CChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 408 KDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 408 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++++.+...|.+++||+|||+++++++|.+++.||.+|+||++|.+++|.+||+.+.++++|.+++|++.+++..|+
T Consensus 364 ~~~~~~~~~~~~~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 440 (504)
T PRK07514 364 RMPEKTAEEFRADGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVESAVIGVPHPDFGE 440 (504)
T ss_pred CCchhhhhhcccCCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeEEEEEeCCCCCcCc
Confidence 99999998888889999999999999999999999999999999999999999999999999999999999887665
No 63
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.7e-60 Score=530.36 Aligned_cols=457 Identities=18% Similarity=0.180 Sum_probs=358.7
Q ss_pred CcchhHHHHHHHhhcCCCcEEEe---------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHh
Q 036361 13 PLTTLGFLERAATAYSDCPSIVY---------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~---------~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
..+++++|+++++.+|+++|+++ .++++||+||.++++++|++|.+.|+++|++|+++++|++++++++||
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~~lA 314 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVAVMG 314 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHHHHH
Confidence 35799999999999999999986 347899999999999999999999999999999999999999999999
Q ss_pred hhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch---HHHHHHhccCC-CCCCCCeEEEecCCcccccCccCCCc
Q 036361 84 VPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS---SLVLEALSLFP-RDTKRPHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~ 159 (485)
|+++|++++|++|..+.+++..+++.+++++++++.... ..+........ .....+.+. +.+....... ..
T Consensus 315 ~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~-- 389 (1389)
T TIGR03443 315 VLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLVGG--SL-- 389 (1389)
T ss_pred HHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-eccccccccc--cc--
Confidence 999999999999999999999999999999999876421 11111111000 000111111 1111000000 00
Q ss_pred cccccccccccccccCC--CCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecc
Q 036361 160 VTVDFIDTYEGFVEEGD--PKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLP 237 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p 237 (485)
. ....+...... ..........++++++++|||||||.||+|+++|+++...+.+....+++.++++++...|
T Consensus 390 ---~--~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~~ 464 (1389)
T TIGR03443 390 ---E--GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLSG 464 (1389)
T ss_pred ---c--cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 0 00000000000 0001111245789999999999999999999999999999888888889999999999999
Q ss_pred hhhHhHHHHHHHHHhhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCCh
Q 036361 238 MFHANGWGYTWGMAAVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPA 314 (485)
Q Consensus 238 ~~~~~g~~~~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~ 314 (485)
++|..++..++.+++.|+++++.+. .++..+++.++++++|++.++|++++.|.... ...++++|.+++||+++++
T Consensus 465 ~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~-~~~~~~lr~~~~gGe~l~~ 543 (1389)
T TIGR03443 465 IAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA-TTPIPSLHHAFFVGDILTK 543 (1389)
T ss_pred ceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc-cccCCCccEEEEecccCCH
Confidence 9999888889999999999998864 36889999999999999999999999987543 3457899999999999999
Q ss_pred hhhhhhhcc--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCC-CCcccCCCce
Q 036361 315 PVLSRTESM--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPET-GESVKRDGVS 391 (485)
Q Consensus 315 ~~~~~~~~~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~-~~~~~~g~~~ 391 (485)
...+++.+. ++++++.||+||++..++.....................++|.|++++ +++|+|+++ +++++.| +
T Consensus 544 ~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~~G--~ 620 (1389)
T TIGR03443 544 RDCLRLQTLAENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNV-QLLVVNRNDRTQTCGVG--E 620 (1389)
T ss_pred HHHHHHHHhCCCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCC-EEEEECCccCCCcCCCC--C
Confidence 999888754 789999999999987655432211100000000011235789999998 999999643 5788888 8
Q ss_pred ecEEEEecCcccccccCChhhhccccc----------------------------CCCeeecCceEEEecCceEEEEccC
Q 036361 392 LGEVVLRGGCVTVGYFKDKESTRRCIS----------------------------DNGWFYTGDIAVMHVDGYVEIKDRS 443 (485)
Q Consensus 392 ~Gel~v~~~~~~~gy~~~~~~~~~~~~----------------------------~~~~~~TGD~~~~~~~g~l~~~gR~ 443 (485)
.|||+|+|+++++||+++++.+...|. .++||+|||+|++++||.|+|+||.
T Consensus 621 ~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~~~dG~l~~~GR~ 700 (1389)
T TIGR03443 621 VGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRYLPDGNVECCGRA 700 (1389)
T ss_pred ceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeEcCCCCEEEeccc
Confidence 899999999999999999999988773 2579999999999999999999999
Q ss_pred CceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 444 KDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 444 ~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
||+||++|++|+|.|||.+|.+||.|.+++|++.+++..+
T Consensus 701 dd~Iki~G~rI~p~eIE~~l~~~p~V~~a~v~~~~~~~~~ 740 (1389)
T TIGR03443 701 DDQVKIRGFRIELGEIDTHLSQHPLVRENVTLVRRDKDEE 740 (1389)
T ss_pred CCEEEeCcEEecHHHHHHHHHhCcchheeEEEEeeCCCCC
Confidence 9999999999999999999999999999999888776543
No 64
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.6e-60 Score=474.49 Aligned_cols=425 Identities=24% Similarity=0.314 Sum_probs=350.8
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.+.++.++|++++. ++++|+.+.++++||.||.++++++|++|++. |++++++|+++++|+++++++++||+++|++
T Consensus 3 ~~~~~~~~l~~~a~--~~~~a~~~~~~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~lA~~~~G~~ 80 (529)
T PRK07867 3 SAPTVAELLLPLAE--DDDRGLYFEDSFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLGAAALSGIV 80 (529)
T ss_pred ccccHHHHHHHhcc--cCCceEEECCcEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHhcCCE
Confidence 45578899988875 79999999999999999999999999999996 8999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|+++..+.+++.++++.++++++|++++..+.+.+.. ....++..+.. .+.+
T Consensus 81 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~-------~~~~~~~~~~~-------------------~~~~ 134 (529)
T PRK07867 81 PVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD-------PGVRVINVDSP-------------------AWAD 134 (529)
T ss_pred EEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc-------cCceEEEeccc-------------------cHHH
Confidence 999999999999999999999999999987665443321 11122222110 0111
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWG 249 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~ 249 (485)
.+..............++++++++|||||||.||+|+++|+++..+.......+++..+|++++..|++|..++.. ++.
T Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~ 214 (529)
T PRK07867 135 ELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAV 214 (529)
T ss_pred HhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHH
Confidence 1111111111112345689999999999999999999999999988888888888999999999999999998866 566
Q ss_pred HHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC--CCCCCCceEEeccCCCChhhhhhhh-ccCCe
Q 036361 250 MAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF--EPLKTPVQILTAGAPPPAPVLSRTE-SMGFV 326 (485)
Q Consensus 250 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~--~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~ 326 (485)
++..|+++++.+.+++..+++.++++++|++.++|+.+..++...+. ...+++| +++||+.+++.. .++. .++++
T Consensus 215 ~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~~~~~~lr-~~~gg~~~~~~~-~~~~~~~g~~ 292 (529)
T PRK07867 215 ALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPERPDDADNPLR-IVYGNEGAPGDI-ARFARRFGCV 292 (529)
T ss_pred HHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCcccccccceE-EEecCCCChHHH-HHHHHHhCCc
Confidence 78889999888889999999999999999999999999988765421 2234666 456788887765 4444 67999
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCce------------ecE
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVS------------LGE 394 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~------------~Ge 394 (485)
+++.||+||++..+.... . ....++|.+.++ +++++++++.+++.| + .||
T Consensus 293 l~~~YG~TE~~~~~~~~~---~----------~~~~~~g~~~~~---~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Ge 354 (529)
T PRK07867 293 VVDGFGSTEGGVAITRTP---D----------TPPGALGPLPPG---VAIVDPDTGTECPPA--EDADGRLLNADEAIGE 354 (529)
T ss_pred EEEeecccccccccccCC---C----------CCCCCcCCCCCC---EEEEECCCCCCCCCC--ccccccccccCCcceE
Confidence 999999999986544221 0 112467888877 577887788888887 5 899
Q ss_pred EEE-ecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeE
Q 036361 395 VVL-RGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAA 473 (485)
Q Consensus 395 l~v-~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~ 473 (485)
|++ +|++++.||+++++.+...+. ++||+|||+|+++++|.+++.||.+|+|+++|++++|.+||++|.++|+|.+++
T Consensus 355 l~i~~g~~~~~gy~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~~~ 433 (529)
T PRK07867 355 LVNTAGPGGFEGYYNDPEADAERMR-GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERILLRYPDATEVA 433 (529)
T ss_pred EEEecCCcccccccCChHhhhhhhc-CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHHHHhCCCeeEEE
Confidence 999 999999999999999888887 899999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCCC
Q 036361 474 VVARPDKFWGET 485 (485)
Q Consensus 474 v~~~~~~~~g~~ 485 (485)
|++.+++..|++
T Consensus 434 V~g~~~~~~g~~ 445 (529)
T PRK07867 434 VYAVPDPVVGDQ 445 (529)
T ss_pred EEeccCCCCCee
Confidence 999999988863
No 65
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-59 Score=477.25 Aligned_cols=454 Identities=24% Similarity=0.345 Sum_probs=359.2
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
.+++.++|.++++++|+++|+.+.++++||.||.++++++|++|.+. |+++||+|+++++|++++++++|||+++|+++
T Consensus 23 ~~~~~~~l~~~~~~~p~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la~~~~G~v~ 102 (562)
T PRK12492 23 YKSVVEVFERSCKKFADRPAFSNLGVTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFGALRAGLIV 102 (562)
T ss_pred cCcHHHHHHHHHHhCCCCeeEecCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 35899999999999999999999889999999999999999999984 99999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEec--CCccccc----------CccCCCc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVD--DDAAASS----------TTTTSPT 159 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~~~~~----------~~~~~~~ 159 (485)
+++++..+.+++.++++.+++++++++....+......... ....++... +...... .......
T Consensus 103 v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (562)
T PRK12492 103 VNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT----GIEYLIEAKMGDLLPAAKGWLVNTVVDKVKKMVPA 178 (562)
T ss_pred eccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc----CceEEEeechhhccccccchhcccccccccccccc
Confidence 99999999999999999999999999876555443332211 111111110 0000000 0000000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC---------CCC-C
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA---------VPK-Q 229 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~---------~~~-~ 229 (485)
........+++.............+...+++++++|||||||.||+|+++|+++..+.......+. ... .
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (562)
T PRK12492 179 YHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQPLMKEGQ 258 (562)
T ss_pred cCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccccccCCC
Confidence 000111222222222111111112345679999999999999999999999999877665554432 222 3
Q ss_pred CEEEEecchhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceE
Q 036361 230 PVYLWTLPMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQI 305 (485)
Q Consensus 230 ~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i 305 (485)
+++++.+|++|.+++.. ++..+..|+..++.. .+++..+++.++++++|++..+|+++..+.+.. ...+++++|.+
T Consensus 259 ~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~ 338 (562)
T PRK12492 259 EVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDHPGFKDLDFSALKLT 338 (562)
T ss_pred eEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhCcCcccccccceeEE
Confidence 57788999999999865 455667777666554 568999999999999999999999999998765 33457899999
Q ss_pred EeccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCc
Q 036361 306 LTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGES 384 (485)
Q Consensus 306 ~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~ 384 (485)
+++|+++++++.+++. .+++++++.||+||++++++.+.... ....+++|.|.+++ +++|+|+ ++.+
T Consensus 339 ~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~p~~~~-~v~ivd~-~~~~ 406 (562)
T PRK12492 339 NSGGTALVKATAERWEQLTGCTIVEGYGLTETSPVASTNPYGE----------LARLGTVGIPVPGT-ALKVIDD-DGNE 406 (562)
T ss_pred EeccccCCHHHHHHHHHHhCCceeeccCccccCceeeecCCcc----------cccCCccceecCCC-EEEEECC-CCCC
Confidence 9999999999999988 46999999999999987665443111 11235789999998 9999996 7888
Q ss_pred ccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh
Q 036361 385 VKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY 464 (485)
Q Consensus 385 ~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~ 464 (485)
+++| +.|||+++|+.++.||+++++.+...|..++||+|||+|+++++|.+++.||.+|+++++|++++|.+||+.|.
T Consensus 407 ~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TGD~g~~~~~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~ 484 (562)
T PRK12492 407 LPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFKTGDIAVIDPDGFVRIVDRKKDLIIVSGFNVYPNEIEDVVM 484 (562)
T ss_pred CCCC--CceEEEEeCCccccccccCchhhhhcccCCCceecCcEEEECCCCeEEEecccCCeEEECCEEECHHHHHHHHH
Confidence 9888 78999999999999999999999888876899999999999999999999999999999999999999999999
Q ss_pred cCcCcceeEEEeccCCCCCC
Q 036361 465 SNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 465 ~~~~v~~~~v~~~~~~~~g~ 484 (485)
++|+|.+++|++.+++..|+
T Consensus 485 ~~~~v~~~~v~~~~~~~~~~ 504 (562)
T PRK12492 485 AHPKVANCAAIGVPDERSGE 504 (562)
T ss_pred hCCCeeEEEEEeccCCCCCc
Confidence 99999999999999887775
No 66
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-60 Score=488.65 Aligned_cols=437 Identities=19% Similarity=0.209 Sum_probs=343.6
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
+...+.++.++|+++++.+|+++|+.+.+ +++||+||.++++++|++|.+.|+++||+|+++++|+++|++++|
T Consensus 44 ~~~~~~~l~~~l~~~a~~~pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 123 (624)
T PRK12582 44 LGPYPRSIPHLLAKWAAEAPDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMTL 123 (624)
T ss_pred CCCcccCHHHHHHHHHHHCCCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHH
Confidence 34557789999999999999999998753 689999999999999999999999999999999999999999999
Q ss_pred hhhccCceEEecCCCCCH-----HHHHHHhhhcCCcEEEEcCcc-hHHHHHHhccCCCCCCCCeEEEecCCcccccCccC
Q 036361 83 GVPMSGAILNNINTRLDA-----HNLSVLLQHSESKLVFVDHLH-SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTT 156 (485)
Q Consensus 83 A~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 156 (485)
||+++|++++|++|.++. +++.++++.++++++|++... .......... ....++.++.....
T Consensus 124 A~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~------ 192 (624)
T PRK12582 124 AAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL-----LDVTVVHVTGPGEG------ 192 (624)
T ss_pred HHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh-----cCceEEEEcCCCcc------
Confidence 999999999999999874 899999999999999998642 1111111111 11233333321100
Q ss_pred CCccccccccccccccccCCCC--CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCC---CCE
Q 036361 157 SPTVTVDFIDTYEGFVEEGDPK--YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPK---QPV 231 (485)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~---~~~ 231 (485)
.....+.++....... ........++++++++|||||||.||+|++||+++..+.......+.... .++
T Consensus 193 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~ 266 (624)
T PRK12582 193 ------IASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPV 266 (624)
T ss_pred ------cccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCce
Confidence 0011222222211111 00112245689999999999999999999999999887766654444443 579
Q ss_pred EEEecchhhHhHHHH-HHHHHhhcceEeecc-cCCH---HHHHHHHHhcCceeeecchHHHHHHhCCCC------CCCCC
Q 036361 232 YLWTLPMFHANGWGY-TWGMAAVGATNICLR-RFDA---SAISDLIQKHNVTHMCGAPVVLNMISNSPD------FEPLK 300 (485)
Q Consensus 232 ~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~---~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~~l~ 300 (485)
++..+|++|.+++.. ++.++..|+++++.+ .+++ ..+++.++++++|+++++|.+++.|.+... ...++
T Consensus 267 ~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~ 346 (624)
T PRK12582 267 SLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDALRRSFFK 346 (624)
T ss_pred EEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHHHHHHHhh
Confidence 999999999999865 567788899988875 3443 356777889999999999999998875431 12367
Q ss_pred CCceEEeccCCCChhhhhhhhcc-------CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcce
Q 036361 301 TPVQILTAGAPPPAPVLSRTESM-------GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTE 373 (485)
Q Consensus 301 ~lr~i~~~g~~l~~~~~~~~~~~-------~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~ 373 (485)
++|.+++||+++++++.+++++. ++++++.||+||+++++...... ....+++|+|.+++ +
T Consensus 347 slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~ 414 (624)
T PRK12582 347 NLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGYGATETAPTTTGTHWD-----------TERVGLIGLPLPGV-E 414 (624)
T ss_pred heeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEeccccccccceeecccCC-----------CCCCCCCCcCCCCc-E
Confidence 89999999999999999998853 36899999999998765432111 02246899999998 9
Q ss_pred eEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEE-e---cCceEEEEccCCceEE-
Q 036361 374 VDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVM-H---VDGYVEIKDRSKDVII- 448 (485)
Q Consensus 374 ~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~-~---~~g~l~~~gR~~~~i~- 448 (485)
+++++ .| +.|||+++|++++.||+++++.+...|..+|||+|||+|++ | +||.++|+||.+|+|+
T Consensus 415 v~i~~--------~G--~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~ 484 (624)
T PRK12582 415 LKLAP--------VG--DKYEVRVKGPNVTPGYHKDPELTAAAFDEEGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKL 484 (624)
T ss_pred EEEcc--------CC--CceEEEEECCcccccccCCccchhhhcCccCCccccceEEecCCcCCCCceEEeccchhhEec
Confidence 99864 24 67999999999999999999999988877999999999998 4 4699999999999999
Q ss_pred eCCeeechHHHH--HHHhcCcCcceeEEEeccCCCCCC
Q 036361 449 SGGENICSAEVE--SVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 449 ~~G~~i~~~~ie--~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.+|++|+|.+|| .++.+||.|.+|+|+|.+++.+|+
T Consensus 485 ~~G~~i~p~~iE~e~~l~~~p~V~~a~VvG~~~~~~g~ 522 (624)
T PRK12582 485 STGTWVSVGTLRPDAVAACSPVIHDAVVAGQDRAFIGL 522 (624)
T ss_pred CCCcEechHHHHHHHHHhcCcchheEEEEcCCCCcEEE
Confidence 689999999885 678899999999999999998775
No 67
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.9e-59 Score=477.36 Aligned_cols=449 Identities=29% Similarity=0.418 Sum_probs=365.2
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
....+++++|.+.++++|+++|+++. ++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|
T Consensus 15 ~~~~~l~~~l~~~~~~~p~~~a~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a~~~~G 94 (558)
T PRK12583 15 LLTQTIGDAFDATVARFPDREALVVRHQALRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFATARIG 94 (558)
T ss_pred cccCcHHHHHHHHHHHCCCCeEEEecCCCcEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHHHhhC
Confidence 34468999999999999999999884 4789999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCC----------CCCCCeEEEecCCcccccC
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPR----------DTKRPHLVLVDDDAAASST 153 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~----------~~~~~~~i~~~~~~~~~~~ 153 (485)
++++++++..+.+++..+++.++++++|++.... ..+.+....... ......++..+....
T Consensus 95 ~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 170 (558)
T PRK12583 95 AILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAPP---- 170 (558)
T ss_pred CEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCCC----
Confidence 9999999999999999999999999999976432 112221111100 001122222222110
Q ss_pred ccCCCccccccccccccccccCCC-----CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCC
Q 036361 154 TTTSPTVTVDFIDTYEGFVEEGDP-----KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPK 228 (485)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~ 228 (485)
.....|++....... .........++++++++|||||||.||+|.++|+++..++......+++.+
T Consensus 171 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 171 ---------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred ---------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 011122222111111 011112345678999999999999999999999999988888888888999
Q ss_pred CCEEEEecchhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCce
Q 036361 229 QPVYLWTLPMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQ 304 (485)
Q Consensus 229 ~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~ 304 (485)
+|++++.+|++|.+|+.. ++.++..|+++++.. .+++..+++.++++++|++.++|+++..+.... ....++++|.
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~~lr~ 321 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQRGNFDLSSLRT 321 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHccccccCCCchhheE
Confidence 999999999999999865 677788888887654 578999999999999999999999998887655 3345789999
Q ss_pred EEeccCCCChhhhhhhh-ccC-CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCC
Q 036361 305 ILTAGAPPPAPVLSRTE-SMG-FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETG 382 (485)
Q Consensus 305 i~~~g~~l~~~~~~~~~-~~~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~ 382 (485)
++++|+++++++.+++. +++ ..+.+.||+||++++++.+..... ......++|.|.+++ .++|+|++ +
T Consensus 322 i~~~G~~~~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~vG~p~~~~-~~~i~d~~-~ 391 (558)
T PRK12583 322 GIMAGAPCPIEVMRRVMDEMHMAEVQIAYGMTETSPVSLQTTAADD--------LERRVETVGRTQPHL-EVKVVDPD-G 391 (558)
T ss_pred EEecCCCCCHHHHHHHHHHcCCcceeccccccccccceeccCcccc--------cccccCCCCccCCCC-eEEEECCC-C
Confidence 99999999999999987 554 579999999999987665432111 112346889999998 99999985 8
Q ss_pred CcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHH
Q 036361 383 ESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESV 462 (485)
Q Consensus 383 ~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~ 462 (485)
.+++.| +.|||+++|+.++.||+++++.+...+..++||+|||+|++++||++++.||.+|+++++|.+|+|.+||++
T Consensus 392 ~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~TGDl~~~~~dg~l~i~GR~~~~i~~~G~~v~~~~IE~~ 469 (558)
T PRK12583 392 ATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDEDGWMHTGDLATMDEQGYVRIVGRSKDMIIRGGENIYPREIEEF 469 (558)
T ss_pred CCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCCCCCeeccceEEECCCccEEEEecccceeEECCEEeCHHHHHHH
Confidence 999998 889999999999999999999988877568999999999999999999999999999999999999999999
Q ss_pred HhcCcCcceeEEEeccCCCCCC
Q 036361 463 LYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 463 l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+.++++|.+++|++.+++..|+
T Consensus 470 l~~~~~v~~~~v~~~~~~~~~~ 491 (558)
T PRK12583 470 LFTHPAVADVQVFGVPDEKYGE 491 (558)
T ss_pred HHhCCCeeEEEEEeeecCCCCc
Confidence 9999999999999999876554
No 68
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.3e-60 Score=480.08 Aligned_cols=463 Identities=25% Similarity=0.395 Sum_probs=368.8
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCC---eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNN---TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
....+.|+.++|+++++.+|+++|+.+.+ +.+||.||.++++++|++|++ .|+++||+|+++++|+++++++++||
T Consensus 5 ~~~~~~~~~~~l~~~a~~~~~~~a~~~~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~~~~~lA~ 84 (576)
T PRK05620 5 MQDVPLSLTRILEYGSTVHGDTTVTTWGGAEQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEHLEVLFAV 84 (576)
T ss_pred hhcCCCcHHHHHHHHHHhCCCceEEEEcCCceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 34567899999999999999999998753 799999999999999999997 89999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
+++|+++++++|..+.+++.++++.++++++|++....+.+.+...... ....++..+............ ....
T Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~---~~~~ 158 (576)
T PRK05620 85 ACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKECP---CVRAVVFIGPSDADSAAAHMP---EGIK 158 (576)
T ss_pred HhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhhCc---cccEEEEecCcccccchhccc---cccc
Confidence 9999999999999999999999999999999999887777766655443 334455444321110000000 0011
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHH--HHHhCCCCCCEEEEecchhhHh
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANA--LIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
...|.++........ ......++++++++|||||||.||+|.++|+++..+.... ...+.+..++++++.+|++|.+
T Consensus 159 ~~~~~~l~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~ 237 (576)
T PRK05620 159 VYSYEALLDGRSTVY-DWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIYHVL 237 (576)
T ss_pred cccHHHHhhcCCCcC-CCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChHHhh
Confidence 223444443222211 1223456899999999999999999999999986654432 2346788899999999999999
Q ss_pred HHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhh
Q 036361 243 GWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSR 319 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~ 319 (485)
++...+.++..|+++++.+ .+++..+++.++++++|.++++|+++..+.... ......++|.++++|+.+++.+.++
T Consensus 238 g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~ 317 (576)
T PRK05620 238 SWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNPPERMSLQEIYVGGSAVPPILIKA 317 (576)
T ss_pred hhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccCcccCceeEEEEcCCCCCHHHHHH
Confidence 9988888999999988875 579999999999999999999999998887543 2233457999999999999999999
Q ss_pred hh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 320 TE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 320 ~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
++ .+++++++.||+||++.++........ ...........++|++.++. +++++++ +..++....+.|||+++
T Consensus 318 ~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~---~~~~~~~~~~~~~G~~~~~~-~~~i~~~--g~~~~~~~~~~Gel~v~ 391 (576)
T PRK05620 318 WEERYGVDVVHVWGMTETSPVGTVARPPSG---VSGEARWAYRVSQGRFPASL-EYRIVND--GQVMESTDRNEGEIQVR 391 (576)
T ss_pred HHHHhCCceeeeccccccccceeeeccCCc---cccccccccccccCCcCCce-eEEEecC--CccccCCCCCceEEEEE
Confidence 88 568999999999999876554321110 00000111124778888888 9999984 66665322267999999
Q ss_pred cCcccccccCChhhh----------------cccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHH
Q 036361 399 GGCVTVGYFKDKEST----------------RRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESV 462 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~----------------~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~ 462 (485)
|+.++.||+++++.+ ...+..++||+|||++++++||.+++.||.+|+|+.+|.+|++.+||+.
T Consensus 392 g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~i~~~eIE~~ 471 (576)
T PRK05620 392 GNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVIRSGGEWIYSAQLENY 471 (576)
T ss_pred cCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhhhcCCEEEcHHHHHHH
Confidence 999999999998877 2234457899999999999999999999999999999999999999999
Q ss_pred HhcCcCcceeEEEeccCCCCCC
Q 036361 463 LYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 463 l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
|.+||.|.+|+|++.+++..|+
T Consensus 472 l~~~p~v~~~~vv~~~~~~~g~ 493 (576)
T PRK05620 472 IMAAPEVVECAVIGYPDDKWGE 493 (576)
T ss_pred HhcCCCceEEEEEeccCCCcCc
Confidence 9999999999999999988776
No 69
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.2e-60 Score=488.23 Aligned_cols=434 Identities=20% Similarity=0.263 Sum_probs=342.7
Q ss_pred hcCCCcEEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCH
Q 036361 26 AYSDCPSIVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA 100 (485)
Q Consensus 26 ~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (485)
.+|+++|+++.+ +++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++..+.
T Consensus 96 ~~~~~~Al~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~~~~ 175 (655)
T PRK03584 96 RRDDRPAIIFRGEDGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPDFGV 175 (655)
T ss_pred CCCCCeEEEEECCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCCCCH
Confidence 579999999753 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCcc---------hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 101 HNLSVLLQHSESKLVFVDHLH---------SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+++.++++.++++++|+++.. .+.+.++....+ ....++.++......... .......|+++
T Consensus 176 ~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~------~~~~~~~~~~~ 246 (655)
T PRK03584 176 QGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALP---SLEHVVVVPYLGPAAAAA------ALPGALLWEDF 246 (655)
T ss_pred HHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCC---CccEEEEEecCCCccccc------ccCCcccHHHH
Confidence 999999999999999997643 223333333322 334555554321100000 00112234443
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHH-HHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFIL-TANALIDWAVPKQPVYLWTLPMFHANGWGYTWGM 250 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 250 (485)
............+...+++++|+|||||||.||+|+++|++++.+ .......+.+.++|++++..++.|..+ ..++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~ 325 (655)
T PRK03584 247 LAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMW-NWLVSG 325 (655)
T ss_pred hhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhH-HHHHHH
Confidence 331111111122356789999999999999999999999987644 445555678899999999999888754 345688
Q ss_pred HhhcceEeecc----cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 251 AAVGATNICLR----RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 251 l~~G~~~~~~~----~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
++.|+++++.+ .+++..+++.++++++|++..+|++++.+.+.. ...+++++|.++++|+++++++.+++.
T Consensus 326 L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~~Ge~l~~~~~~~~~~ 405 (655)
T PRK03584 326 LLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGETHDLSALRTIGSTGSPLPPEGFDWVYE 405 (655)
T ss_pred HHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccccCChhheEEEEEecCCCCHHHHHHHHH
Confidence 99999999875 258999999999999999999999999987643 235678999999999999999999988
Q ss_pred cc--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 SM--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 ~~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
.+ ++.+.+.||+||+++........ . ....+++|.|.+++ +++|+|+ +|+++ +| +.|||++++
T Consensus 406 ~~~~~~~~~~~yG~TE~~~~~~~~~~~-----~-----~~~~g~~g~p~~g~-~~~ivd~-~g~~~-~g--~~GeL~v~g 470 (655)
T PRK03584 406 HVKADVWLASISGGTDICSCFVGGNPL-----L-----PVYRGEIQCRGLGM-AVEAWDE-DGRPV-VG--EVGELVCTK 470 (655)
T ss_pred HhCCCceEEeccChHhhhcccccCCCC-----C-----CcCCCccCCCcCCc-eeEEECC-CCCCC-CC--CceEEEEcc
Confidence 44 57899999999986543321100 0 11246789999998 9999996 68888 66 789999999
Q ss_pred C--cccccccCChhhhc--cc-cc-CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeE
Q 036361 400 G--CVTVGYFKDKESTR--RC-IS-DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAA 473 (485)
Q Consensus 400 ~--~~~~gy~~~~~~~~--~~-~~-~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~ 473 (485)
+ +++.||+++++.+. .. +. .++||+|||+|++|+||.++|+||.||+||++|++|+|.|||++|.+||+|.+|+
T Consensus 471 p~p~~~~gy~~~~~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~~~p~V~ea~ 550 (655)
T PRK03584 471 PFPSMPLGFWNDPDGSRYRDAYFDTFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVEALPEVLDSL 550 (655)
T ss_pred CCCCCcceeeCCCccchHHHhhhccCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHHhCCCcceEE
Confidence 6 79999999887543 11 11 1578999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCC
Q 036361 474 VVARPDKFWGE 484 (485)
Q Consensus 474 v~~~~~~~~g~ 484 (485)
|++.+++..||
T Consensus 551 vvg~~~~~~g~ 561 (655)
T PRK03584 551 VIGQEWPDGDV 561 (655)
T ss_pred EEeeEcCCCCE
Confidence 99999987765
No 70
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7e-61 Score=566.08 Aligned_cols=426 Identities=18% Similarity=0.212 Sum_probs=367.4
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..+++++|+++++++|+++|+++.++++||+||+++++++|+.|.+.|+++|++|+|+++|++++++++|||+++|++++
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~lavl~aGa~~v 3173 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFGDQQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLAVLKAGGAYV 3173 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeCCcccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHHHHhhCcEee
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
||+|..+.+++.++++.+++++++++....+.+... .....+.++....
T Consensus 3174 pld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~--------~~~~~~~~~~~~~----------------------- 3222 (3956)
T PRK12467 3174 PLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAP--------AGDTALTLDRLDL----------------------- 3222 (3956)
T ss_pred cCCCCChHHHHHHHHhCCCCcEEEechhhhhhcccc--------cCCceeeecchhh-----------------------
Confidence 999999999999999999999999987553332110 1112222222110
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.............++++++++|||||||.||||+++|+++.+.+.+....++++++|++++..|++|..+...++.++.
T Consensus 3223 -~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~ 3301 (3956)
T PRK12467 3223 -NGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQERFLWTLI 3301 (3956)
T ss_pred -cccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHHHHHHHHHh
Confidence 0000111112346789999999999999999999999999999999888899999999999999999999888999999
Q ss_pred hcceEeeccc--CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhc-c-CCeee
Q 036361 253 VGATNICLRR--FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTES-M-GFVVC 328 (485)
Q Consensus 253 ~G~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~i~ 328 (485)
.|+++++.+. +++..+++.|+++++|++.++|++++.+.+......++++|.+++|||++++++.+++.+ + ++.++
T Consensus 3302 ~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~ 3381 (3956)
T PRK12467 3302 CGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAGGADCASLDIYVFGGEAVPPAAFEQVKRKLKPRGLT 3381 (3956)
T ss_pred CCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccccCCCCceEEEEecCCCCHHHHHHHHHhCCCCEEE
Confidence 9999999875 789999999999999999999999999987665667889999999999999999999984 4 67899
Q ss_pred eccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccC
Q 036361 329 HGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFK 408 (485)
Q Consensus 329 ~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~ 408 (485)
+.||+||++..++....... ........++|+|++++ +++|+|. ++++++.| +.|||+|+|+++++||++
T Consensus 3382 n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~v~d~-~~~~vp~G--~~GEL~i~G~~v~~GY~~ 3451 (3956)
T PRK12467 3382 NGYGPTEAVVTVTLWKCGGD------AVCEAPYAPIGRPVAGR-SIYVLDG-QLNPVPVG--VAGELYIGGVGLARGYHQ 3451 (3956)
T ss_pred eCcccchhEeeeEEEecccc------cccCCCCCCCccccCCC-EEEEECC-CCCCCCCC--CCceEEEcchhhhhhccC
Confidence 99999999876654332111 00111235789999998 9999995 78999999 889999999999999999
Q ss_pred ChhhhcccccCCC-------eeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 409 DKESTRRCISDNG-------WFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 409 ~~~~~~~~~~~~~-------~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
+++.|...|..++ ||+|||+|++++||.|+|+||.|++||++|.+|++.|||++|.++|+|.+|+|++.++.
T Consensus 3452 ~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~~a~v~~~~~~ 3530 (3956)
T PRK12467 3452 RPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVREAVVLARDGA 3530 (3956)
T ss_pred CcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccceEEEEEecCC
Confidence 9999999987554 59999999999999999999999999999999999999999999999999999988643
No 71
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1.1e-59 Score=475.50 Aligned_cols=437 Identities=22% Similarity=0.323 Sum_probs=361.9
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...++.++|+++++ |+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 23 ~~~~~~~~~~~~a~--p~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la~~~~G~v~ 100 (536)
T PRK10946 23 QDLPLTDILTRHAA--SDAIAVICGERQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFALLKLGVAP 100 (536)
T ss_pred cCccHHHHHHHhhC--CCCeEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHHHHHcCeEE
Confidence 45689999999887 9999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFID 166 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 166 (485)
+++.+.....++..+++.+++++++++.... ..........+ ....++..++.. ..
T Consensus 101 v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~----------------~~ 161 (536)
T PRK10946 101 VNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHS---SLRVVLLLNDDG----------------EH 161 (536)
T ss_pred ecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCC---CceEEEEecCCC----------------Cc
Confidence 8877777788899999999999999986532 11222222122 222233222110 01
Q ss_pred ccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH
Q 036361 167 TYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY 246 (485)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~ 246 (485)
.+...+....... ...+..++++++++|||||||.||+|++||+++..++......+.+.+++++++.+|++|.+++..
T Consensus 162 ~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~ 240 (536)
T PRK10946 162 SLDDAINHPAEDF-TATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSS 240 (536)
T ss_pred cHHHHhhCccccc-ccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchh
Confidence 1111121111111 122345789999999999999999999999999999888888888999999999999999988753
Q ss_pred --HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhh
Q 036361 247 --TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 247 --~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
++.++..|+++++.+.+++..+++.++++++|++.++|.++..+.+.. ....++++|.+++||+++++.+.+++
T Consensus 241 ~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~l~~~~~~~~ 320 (536)
T PRK10946 241 PGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGSRAQLASLKLLQVGGARLSETLARRI 320 (536)
T ss_pred hhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCccccccceeEEEECCCCCCHHHHHHH
Confidence 678899999999988889999999999999999999999999997652 33457789999999999999999998
Q ss_pred h-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccc-cCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 321 E-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKT-VGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 321 ~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
. .+++++++.||+||++.... ..... ......++|.|. ++. .++|+|+ +++++++| +.|||+++
T Consensus 321 ~~~~g~~~~~~YG~tE~~~~~~-~~~~~---------~~~~~~~~G~p~~~~~-~v~i~d~-~~~~~~~g--~~Gel~v~ 386 (536)
T PRK10946 321 PAELGCQLQQVFGMAEGLVNYT-RLDDS---------DERIFTTQGRPMSPDD-EVWVADA-DGNPLPQG--EVGRLMTR 386 (536)
T ss_pred HHhcCCeEEEeecccccceeee-cCCCc---------cccccccCCcccCCCc-eEEEECC-CCCCCCCC--CccEEEEe
Confidence 7 56999999999999653322 11110 112245789988 566 9999995 78999999 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|+.++.||+++++.+...|..++||+|||+|++|+||.+++.||.+|+++++|.++++.+||+.|.++|+|.+++|++.+
T Consensus 387 g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~~~v~~~~ 466 (536)
T PRK10946 387 GPYTFRGYYKSPQHNASAFDANGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLLRHPAVIHAALVSME 466 (536)
T ss_pred cCccchhhcCCcccchhhcccCCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHHhCCCcceEEEEcCC
Confidence 99999999999999999888799999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 467 ~~~~g~ 472 (536)
T PRK10946 467 DELMGE 472 (536)
T ss_pred CcccCc
Confidence 988776
No 72
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-59 Score=473.93 Aligned_cols=446 Identities=25% Similarity=0.385 Sum_probs=370.5
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
....+.|+.++|.++++++|+++|+++.+..+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~la~~~~G 86 (524)
T PRK06188 7 LLHSGATYGHLLVSALKRYPDRPALVLGDTRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAIGAAQLAG 86 (524)
T ss_pred hhcCCccHHHHHHHHHHHCCCCeEEEECCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhC
Confidence 34567799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc-chHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHL-HSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDT 167 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (485)
++++|++|..+.+++..+++.++++.+++++. ......+...... ....++.+...... ...
T Consensus 87 ~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--------------~~~ 149 (524)
T PRK06188 87 LRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALALLARVP---SLKHVLTLGPVPDG--------------VDL 149 (524)
T ss_pred CEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHHHhhhcC---CceEEEEeCCccch--------------hhH
Confidence 99999999999999999999999999999876 3333333222221 22334443332100 000
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHH
Q 036361 168 YEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYT 247 (485)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 247 (485)
+... .... .........++++++++|||||||.||+|.++|.++...+......+.+..++++++..|++|..++. +
T Consensus 150 ~~~~-~~~~-~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~~-~ 226 (524)
T PRK06188 150 LAAA-AKFG-PAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGAF-F 226 (524)
T ss_pred HHhh-hccC-cccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhHH-H
Confidence 0000 0000 01111123345799999999999999999999999999888888888899999999999999998874 5
Q ss_pred HHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-ccC
Q 036361 248 WGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SMG 324 (485)
Q Consensus 248 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~ 324 (485)
+.+++.|+++++.+.+++..+++.++++++|++.++|+++..+++.. ....++++|.+++||++++++....+. .++
T Consensus 227 ~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~~~l~~lr~~~~gg~~~~~~~~~~~~~~~~ 306 (524)
T PRK06188 227 LPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLRTRDLSSLETVYYGASPMSPVRLAEAIERFG 306 (524)
T ss_pred HHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCccCCCCcceeEEEEcCCCCCHHHHHHHHHHhC
Confidence 67888999999999999999999999999999999999999998775 334678999999999999999888776 568
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
..+++.||+||++..+..+...... ........++|+|.+++ .++|+|+ ++++++.| +.|||+++|+.++.
T Consensus 307 ~~~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~~~G~p~~g~-~v~i~~~-~~~~~~~g--~~Gel~v~~~~~~~ 377 (524)
T PRK06188 307 PIFAQYYGQTEAPMVITYLRKRDHD-----PDDPKRLTSCGRPTPGL-RVALLDE-DGREVAQG--EVGEICVRGPLVMD 377 (524)
T ss_pred chhhheeCccccCCceeecCchhcc-----ccccccCCccccccCCc-EEEEEcC-CCCCCCCC--CeeEEEEECcchhh
Confidence 8899999999997655543221110 00112345789999998 9999996 68899988 88999999999999
Q ss_pred cccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 405 GYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||++++..+...+. ++||+|||++++++||.+++.||.+++++++|++++|.+||++|.++++|.+++|++.+++..|+
T Consensus 378 gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 456 (524)
T PRK06188 378 GYWNRPEETAEAFR-DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAVAQVAVIGVPDEKWGE 456 (524)
T ss_pred hhcCChHHhhhhhc-CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCeeEEEEEeccCCCcCc
Confidence 99999998888876 89999999999999999999999999999999999999999999999999999999999887665
No 73
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=4.4e-60 Score=520.52 Aligned_cols=458 Identities=21% Similarity=0.251 Sum_probs=371.9
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC-CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN-NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~-~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
....++.+.++++++++|+++|+.+. ++++||+||.++++++|+.|.+ ++++||+|+++++|+++++++++||+++|+
T Consensus 612 ~~~~~l~~~~~~~a~~~p~~~a~~~~~~~~~Ty~el~~~~~~~a~~L~~-~~~~g~~V~i~~~n~~~~~~~~la~~~~G~ 690 (1146)
T PRK08633 612 EALPPLAEAWIDTAKRNWSRLAVADSTGGELSYGKALTGALALARLLKR-ELKDEENVGILLPPSVAGALANLALLLAGK 690 (1146)
T ss_pred CCCCCHHHHHHHHHHhcCCCcEEEcCCCCcCcHHHHHHHHHHHHHHHHH-hCCCCCeEEEECCCchHHHHHHHHHHHcCC
Confidence 44567999999999999999999874 5799999999999999999987 589999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++.++++++++++++++++..+.+.+.... ........++..++..... .....+.
T Consensus 691 v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 758 (1146)
T PRK08633 691 VPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFD-LELPENVKVIYLEDLKAKI-----------SKVDKLT 758 (1146)
T ss_pred EEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCc-hhcccCceEEEeehhcccc-----------chhHHHH
Confidence 999999999999999999999999999987655544321100 0011223444443321100 0000111
Q ss_pred cccccC-CCC----CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHH
Q 036361 170 GFVEEG-DPK----YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGW 244 (485)
Q Consensus 170 ~~~~~~-~~~----~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~ 244 (485)
...... .+. .....+..++|+++++|||||||.||+|.+||+++..++......+...++|++++.+|++|.+++
T Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~ 838 (1146)
T PRK08633 759 ALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFFHSFGL 838 (1146)
T ss_pred HHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHHHHHhH
Confidence 111100 000 000123467899999999999999999999999999988888888889999999999999999998
Q ss_pred HH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhh
Q 036361 245 GY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 245 ~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
.. ++.++..|+++++.+ .+++..+++.++++++|++.++|++++.+.+.. ...+++++|.+++||+++++++.+++
T Consensus 839 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~~~~~~~~~ 918 (1146)
T PRK08633 839 TVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGAEKLKPEVADAF 918 (1146)
T ss_pred HHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcCCcCCHHHHHHH
Confidence 76 778889999988876 479999999999999999999999999998754 44567899999999999999999999
Q ss_pred h-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 321 E-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 321 ~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
+ .+++++++.||+||++++++........... .........++|+|.+++ +++|+|+++++++++| +.|||+++|
T Consensus 919 ~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~~~-~~~~~~~~~~vG~p~~~~-~v~i~d~~~~~~~~~g--~~Gel~v~g 994 (1146)
T PRK08633 919 EEKFGIRILEGYGATETSPVASVNLPDVLAADF-KRQTGSKEGSVGMPLPGV-AVRIVDPETFEELPPG--EDGLILIGG 994 (1146)
T ss_pred HHHhCCCeecccccccCcceEEEecCccccccc-ccccCCCCCCccccCCCC-EEEEEcCCCCccCCCC--CceEEEEcC
Confidence 8 5699999999999998766543211110000 011112356899999998 9999998889999999 889999999
Q ss_pred CcccccccCChhhhcccccC---CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCc--CcceeEE
Q 036361 400 GCVTVGYFKDKESTRRCISD---NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNT--AVNEAAV 474 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~--~v~~~~v 474 (485)
++++.||+++++.+...+.+ ++||+|||+|++|+||.+++.||.+|+||++|++|+|.|||+++.+|| .+.+++|
T Consensus 995 ~~~~~gY~~~~~~t~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l~~~~~~~~~~~~v 1074 (1146)
T PRK08633 995 PQVMKGYLGDPEKTAEVIKDIDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPLGAVEEELAKALGGEEVVFAV 1074 (1146)
T ss_pred CCccccccCCccchHHHhhcCCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECHHHHHHHHHhccCCCCceEEE
Confidence 99999999999988887762 289999999999999999999999999999999999999999999998 5678999
Q ss_pred EeccCCCCCCC
Q 036361 475 VARPDKFWGET 485 (485)
Q Consensus 475 ~~~~~~~~g~~ 485 (485)
++.+|+..||+
T Consensus 1075 ~~~~~~~~g~~ 1085 (1146)
T PRK08633 1075 TAVPDEKKGEK 1085 (1146)
T ss_pred EeccCCCCCcE
Confidence 99999988873
No 74
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.5e-59 Score=473.69 Aligned_cols=457 Identities=24% Similarity=0.322 Sum_probs=363.7
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
.+.+.++.++|.++++++|+++|+++.+..+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+
T Consensus 19 ~~~~~~i~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~~~~G~ 98 (557)
T PRK07059 19 ASQYPSLADLLEESFRQYADRPAFICMGKAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAIAAVLRAGY 98 (557)
T ss_pred CCCCCCHHHHHHHHHHHcCCCceEEEcCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHhcCe
Confidence 34457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCccccc---Ccc--------CCC
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASS---TTT--------TSP 158 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~--------~~~ 158 (485)
+++|++|..+.+++.++++.++++++++++.....+.+..... ....++.......... ... ...
T Consensus 99 ~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (557)
T PRK07059 99 VVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAKT----AVKHVVVASMGDLLGFKGHIVNFVVRRVKKMVP 174 (557)
T ss_pred EEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhccc----CCceeEEeccccccccccccccccccccccccc
Confidence 9999999999999999999999999999877655544443221 1223332211100000 000 000
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC----C---CCCCE
Q 036361 159 TVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA----V---PKQPV 231 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~----~---~~~~~ 231 (485)
.........+.+.+..............++++++++|||||||.||+|+++|.++..++......+. . .....
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (557)
T PRK07059 175 AWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKPRPDQLN 254 (557)
T ss_pred ccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccCCCCCcE
Confidence 0000111222222222222111223356789999999999999999999999999876544332221 1 12356
Q ss_pred EEEecchhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEe
Q 036361 232 YLWTLPMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILT 307 (485)
Q Consensus 232 ~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~ 307 (485)
+++.+|++|.+++.. .+.++..|++.++.+ ..++..+++.++++++|.+..+|.++..+.... ....++++|.++.
T Consensus 255 ~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~l~~~~~ 334 (557)
T PRK07059 255 FVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNNPDFDKLDFSKLIVANG 334 (557)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcCcCcCCchhheEEEe
Confidence 788899999988754 567777888877765 458899999999999999999999999998765 2345678999999
Q ss_pred ccCCCChhhhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCccc
Q 036361 308 AGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVK 386 (485)
Q Consensus 308 ~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~ 386 (485)
||+++++.+.+++. .+++++++.||+||++.+++.+.... .....++|.|.++. +++|+|+ ++++++
T Consensus 335 gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~p~~g~-~v~i~d~-~~~~~~ 402 (557)
T PRK07059 335 GGMAVQRPVAERWLEMTGCPITEGYGLSETSPVATCNPVDA----------TEFSGTIGLPLPST-EVSIRDD-DGNDLP 402 (557)
T ss_pred ccccCCHHHHHHHHHHhCCCeeeccccccccchhhcCCCCC----------CCcCCcccCccCCc-EEEEECC-CCCCCC
Confidence 99999999998888 56999999999999987665442111 11235889999998 9999995 788999
Q ss_pred CCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcC
Q 036361 387 RDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSN 466 (485)
Q Consensus 387 ~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~ 466 (485)
.| +.|||+++|++++.||+++++.+...|..+|||+|||++++++||.+++.||.+|+++++|.+|+|.+||+.+.++
T Consensus 403 ~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~p~~iE~~l~~~ 480 (557)
T PRK07059 403 LG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNEIEEVVASH 480 (557)
T ss_pred CC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecCcEEEEcCCCcEEEecccccceEECCEEEcHHHHHHHHHhC
Confidence 88 8899999999999999999999988887789999999999999999999999999999999999999999999999
Q ss_pred cCcceeEEEeccCCCCCC
Q 036361 467 TAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 467 ~~v~~~~v~~~~~~~~g~ 484 (485)
++|.+++|++.+++..||
T Consensus 481 ~~V~~~~v~~~~~~~~ge 498 (557)
T PRK07059 481 PGVLEVAAVGVPDEHSGE 498 (557)
T ss_pred CceeEEEEEecccCCCCe
Confidence 999999999999887775
No 75
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-59 Score=469.75 Aligned_cols=416 Identities=27% Similarity=0.382 Sum_probs=348.8
Q ss_pred HHHHhhcCCCcEEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC
Q 036361 21 ERAATAYSDCPSIVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 98 (485)
Q Consensus 21 ~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (485)
+.+++.+||++|+.+ .+..+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++..
T Consensus 2 ~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~~ 81 (488)
T PRK09088 2 AFHARLQPQRLAAVDLALGRRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWRL 81 (488)
T ss_pred chhhhhCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCccC
Confidence 467789999999987 578999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCC
Q 036361 99 DAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPK 178 (485)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (485)
+++++..+++.++++++|+++..... ....+.++. +.+.......
T Consensus 82 ~~~~~~~~~~~~~~~~ii~~~~~~~~-------------~~~~~~~~~---------------------~~~~~~~~~~- 126 (488)
T PRK09088 82 SASELDALLQDAEPRLLLGDDAVAAG-------------RTDVEDLAA---------------------FIASADALEP- 126 (488)
T ss_pred CHHHHHHHHHhCCCCEEEEcchhhcc-------------cccccchhh---------------------hhhhcccccc-
Confidence 99999999999999999997643210 000000000 0000000000
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHhhcceE
Q 036361 179 YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAAVGATN 257 (485)
Q Consensus 179 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~ 257 (485)
.......++++++++|||||||.||++.++|+++...+...........++++++.+|++|.+++.. ++.++..|+++
T Consensus 127 -~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~ 205 (488)
T PRK09088 127 -ADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSI 205 (488)
T ss_pred -ccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEE
Confidence 0111234578999999999999999999999999887777776677889999999999999999876 66778889999
Q ss_pred eecccCCHHHHHHHHH--hcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCC
Q 036361 258 ICLRRFDASAISDLIQ--KHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGL 333 (485)
Q Consensus 258 ~~~~~~~~~~~~~~i~--~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~ 333 (485)
++.+.+++..++..+. ++++|.++.+|.+++.+.+.. ....++++|.+++||++++....+.+.+.++++++.||+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~gG~~~~~~~~~~~~~~g~~v~~~YG~ 285 (488)
T PRK09088 206 LVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQPGFDAAALRHLTALFTGGAPHAAEDILGWLDDGIPMVDGFGM 285 (488)
T ss_pred EEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhCcCcCccccccceEEEecCCCCCHHHHHHHHHhCCceeeeecc
Confidence 8888889999998886 489999999999999998764 334578999999999999998888887668999999999
Q ss_pred ccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhh
Q 036361 334 TETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEST 413 (485)
Q Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~ 413 (485)
||++++........ ......+++|.+.+++ +++|+|+ ++++++.| +.|||+++|++++.||+++++.+
T Consensus 286 TE~~~~~~~~~~~~--------~~~~~~~~vG~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~~ 353 (488)
T PRK09088 286 SEAGTVFGMSVDCD--------VIRAKAGAAGIPTPTV-QTRVVDD-QGNDCPAG--VPGELLLRGPNLSPGYWRRPQAT 353 (488)
T ss_pred cccccccccCCCcc--------cccccCCccccCCCCc-EEEEECC-CCCCCcCC--CceEEEEECCccchhhcCChhhh
Confidence 99986543211110 0111335789999998 9999995 68888888 88999999999999999999998
Q ss_pred cccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 414 RRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
...+..++||+|||+|+++++|.+++.||.+|+|+.+|.+++|.+||++|.++|+|.+++|++.+++..|+
T Consensus 354 ~~~~~~~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~~~v~~~~~~~~g~ 424 (488)
T PRK09088 354 ARAFTGDGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRECAVVGMADAQWGE 424 (488)
T ss_pred hhhhcCCCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcceEEEEeCCCccCCc
Confidence 88887789999999999999999999999999999999999999999999999999999999999987665
No 76
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=1.2e-59 Score=483.33 Aligned_cols=435 Identities=18% Similarity=0.224 Sum_probs=338.5
Q ss_pred hcCCCcEEEeCC-----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCH
Q 036361 26 AYSDCPSIVYNN-----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA 100 (485)
Q Consensus 26 ~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (485)
+.++++|+++.+ +++||+||.+++.++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.
T Consensus 96 ~~~~~~a~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~~~ 175 (652)
T TIGR01217 96 AAGTEPALLYVDETHEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDFGA 175 (652)
T ss_pred cCCCCeEEEEECCCCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCCCH
Confidence 457899988743 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCcc---------hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 101 HNLSVLLQHSESKLVFVDHLH---------SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+++.+++++++++++|++... .+.+.++....+ ....++++.......... .. ......++++
T Consensus 176 ~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~---~~--~~~~~~~~~~ 247 (652)
T TIGR01217 176 RGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELP---TLRAVVHIPYLGPRETEA---PK--IDGALDLEDF 247 (652)
T ss_pred HHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCC---CccEEEEEeCCCCccccc---cc--ccCcccHHHH
Confidence 999999999999999997643 334444443333 344555554221000000 00 0111234443
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHH-HHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFIL-TANALIDWAVPKQPVYLWTLPMFHANGWGYTWGM 250 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 250 (485)
............+..++++++|+|||||||.||+|+++|.+++.+ .......+++.++|++++..|+.|..+ ..++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-~~~~~~ 326 (652)
T TIGR01217 248 TAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW-NWLVSG 326 (652)
T ss_pred HhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh-HHHHHH
Confidence 332111111112345689999999999999999999999987543 344445578899999999999998753 345688
Q ss_pred HhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 251 AAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 251 l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
++.|+++++.+. .++..+++.++++++|++..+|.+++.+.... ...+++++|.++++|++++++..+++.
T Consensus 327 l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~l~~~~~~~~~~ 406 (652)
T TIGR01217 327 LATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVHPARTHDLSALQCVASTGSPLPPDGFRWVYD 406 (652)
T ss_pred HhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCCccccCChhheeEEEeecCCCCHHHHHHHHH
Confidence 999999998752 37889999999999999988888887776532 335688999999999999999999887
Q ss_pred ccC--CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 SMG--FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 ~~~--~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
.++ ..+.+.||+||+++........ .....+++|.|.+++ +++|+|+ +|+++ +| +.|||+++|
T Consensus 407 ~~~~~~~~~~~yG~TE~~~~~~~~~~~----------~~~~~g~~g~p~~g~-~v~ivd~-~g~~~-~g--~~GEl~v~g 471 (652)
T TIGR01217 407 EIKADVWLASISGGTDICSCFAGANPT----------LPVHIGEIQAPGLGT-AVQSWDP-EGKPV-TG--EVGELVCTN 471 (652)
T ss_pred HhCCCceEEeccCHHHHhccccCCCCC----------CCCcCCccCCCcCCC-ceEEECC-CCCCC-CC--CccEEEEec
Confidence 443 5678899999975433221100 011235788999998 9999996 77887 46 889999999
Q ss_pred C--cccccccCChhhhc--cc-cc-CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeE
Q 036361 400 G--CVTVGYFKDKESTR--RC-IS-DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAA 473 (485)
Q Consensus 400 ~--~~~~gy~~~~~~~~--~~-~~-~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~ 473 (485)
| +++.||+++++.+. .. +. .+|||+|||+|++|+||+|+++||.||+||++|++|+|.|||++|.+||+|.+|+
T Consensus 472 p~p~~~~gy~~~~~~t~~~~~~~~~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~l~~~p~V~eaa 551 (652)
T TIGR01217 472 PMPSMPIRFWNDPDGSKYRDAYFDTYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNAVERLDEVRESL 551 (652)
T ss_pred CCCccccceeCCCccchhHHhhhcCCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHHHHhCCCcceEE
Confidence 6 68999999987543 11 21 2689999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCC
Q 036361 474 VVARPDKFWGE 484 (485)
Q Consensus 474 v~~~~~~~~g~ 484 (485)
|++.+++..||
T Consensus 552 vvg~~~~~~ge 562 (652)
T TIGR01217 552 CIGQEQPDGGY 562 (652)
T ss_pred EEeeecCCCCE
Confidence 99999998776
No 77
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.2e-59 Score=471.48 Aligned_cols=421 Identities=24% Similarity=0.315 Sum_probs=351.8
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
.+.++.+.|.++++.+|+++|+.+.++.+||.||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~~~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~v~ 112 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDDDGALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVFAVGLLGADV 112 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeCCCcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 46789999999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|+++..+.+++..+++.++++.++++....+.+.... ..++.++.... ...
T Consensus 113 vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~---------~~~~~~~~~~~-----------------~~~-- 164 (516)
T PRK13383 113 VPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD---------DAVAVIDPATA-----------------GAE-- 164 (516)
T ss_pred EEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh---------cceEEeccchh-----------------hhh--
Confidence 99999999999999999999999999887655443321 12222221100 000
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHH--HHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFI--LTANALIDWAVPKQPVYLWTLPMFHANGWGYTWG 249 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~ 249 (485)
... ..+...++.++++|||||||.||+|.++|..... ........+.+..+++++..+|++|.+++..++.
T Consensus 165 ---~~~----~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~~~~~ 237 (516)
T PRK13383 165 ---ESG----GRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLGMLML 237 (516)
T ss_pred ---cCC----CCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHHHHHH
Confidence 000 0112234678999999999999999999974321 1222334567788999999999999999988888
Q ss_pred HHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC----CCCCCCCceEEeccCCCChhhhhhhh-ccC
Q 036361 250 MAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD----FEPLKTPVQILTAGAPPPAPVLSRTE-SMG 324 (485)
Q Consensus 250 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~----~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~ 324 (485)
++..|+++++.+.+++..+++.++++++|.+.++|+++..+....+ ...++++|.++++|+++++++.+++. .++
T Consensus 238 ~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~g 317 (516)
T PRK13383 238 TIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRVRARNPLPQLRVVMSSGDRLDPTLGQRFMDTYG 317 (516)
T ss_pred HHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccccccCCCCceEEEEECCCCCCHHHHHHHHHHcC
Confidence 8999999998888999999999999999999999999999986542 23567899999999999999999988 568
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
..+++.||+||++..+..+.. .......++|.|.++. +++|+|+ +++++++| +.|||+++|+.++.
T Consensus 318 ~~v~~~YG~tE~~~~~~~~~~----------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~g~~~~~ 383 (516)
T PRK13383 318 DILYNGYGSTEVGIGALATPA----------DLRDAPETVGKPVAGC-PVRILDR-NNRPVGPR--VTGRIFVGGELAGT 383 (516)
T ss_pred chhhhcccccccccceecccc----------ccccCCCcccCCCCCc-EEEEECC-CCCCCCCC--CceEEEEecCcccc
Confidence 999999999999865543221 0112245789999998 9999996 78889888 88999999999999
Q ss_pred cccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 405 GYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||++++. ..+. +|||+|||+|++|++|++++.||.+|+||++|.+|+|.+||++|.++|.|.+++|++.+++..|+
T Consensus 384 ~Y~~~~~---~~~~-~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~~~vv~~~~~~~g~ 459 (516)
T PRK13383 384 RYTDGGG---KAVV-DGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVADNAVIGVPDERFGH 459 (516)
T ss_pred cccCCch---hhee-cCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeccccccCc
Confidence 9998654 2233 89999999999999999999999999999999999999999999999999999999999887775
Q ss_pred C
Q 036361 485 T 485 (485)
Q Consensus 485 ~ 485 (485)
+
T Consensus 460 ~ 460 (516)
T PRK13383 460 R 460 (516)
T ss_pred e
Confidence 3
No 78
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.8e-60 Score=493.06 Aligned_cols=440 Identities=20% Similarity=0.268 Sum_probs=348.1
Q ss_pred CCcchhHHHHHHHhhcCC-CcEEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 12 TPLTTLGFLERAATAYSD-CPSIVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~-~~a~~~~~-~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...|+.++|+++++++|+ ++|+.+.+ +++||+||.++++++|++|.+. +++||+|+++++|++++++++|||+++|+
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~lA~~~~G~ 280 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDVNFTPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVIFGASLRRR 280 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcCCCCcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHHHHHHHcCC
Confidence 457899999999999998 57887643 7899999999999999999987 59999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|+++..+.+++.++++.++++++|++.+..+... ........ .....+.+++.... ... . .......
T Consensus 281 v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~-~~~~~~~~-~~~~~i~~~~~~~~---~~~----~-~~~~~~~ 350 (718)
T PRK08043 281 IPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGK-LWHLPEQL-TQVRWVYLEDLKDD---VTT----A-DKLWIFA 350 (718)
T ss_pred cccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhcc-CCChhhhh-ccccEEEhhhhhhh---cch----h-HHHHHHH
Confidence 9999999999999999999999999999866433210 00000000 01122222211000 000 0 0000000
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HH
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TW 248 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~ 248 (485)
... ... ....+..++++++++|||||||.||+|++||+++..++......++++++|++++.+|++|.+++.. ++
T Consensus 351 ~~~---~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~~~ 426 (718)
T PRK08043 351 HLL---MPR-LAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVGLF 426 (718)
T ss_pred HHh---CCc-cccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHHHH
Confidence 000 000 0111245689999999999999999999999999988888777788999999999999999999865 77
Q ss_pred HHHhhcceEeeccc-CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-ccCCe
Q 036361 249 GMAAVGATNICLRR-FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFV 326 (485)
Q Consensus 249 ~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~ 326 (485)
.++..|+++++.+. +++..+++.++++++|++.++|+++..+.+.....+++++|.+++||+++++++.+.++ .++++
T Consensus 427 ~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~lr~i~~gg~~l~~~~~~~~~~~~g~~ 506 (718)
T PRK08043 427 TPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFARLRYVVAGAEKLQESTKQLWQDKFGLR 506 (718)
T ss_pred HHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhhcCcccccceEEEEEeCccCCHHHHHHHHHHcCCC
Confidence 88899999998874 67788899999999999999999998887654445678999999999999999999988 56999
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++++++..... .....++|+|.+++ +++|+|++ +. + +.|||+++|++++.||
T Consensus 507 l~~~YG~TE~~~~~~~~~~~-----------~~~~~svG~p~pg~-~~~i~d~~-~~----~--~~Gel~v~g~~v~~GY 567 (718)
T PRK08043 507 ILEGYGVTECAPVVSINVPM-----------AAKPGTVGRILPGM-DARLLSVP-GI----E--QGGRLQLKGPNIMNGY 567 (718)
T ss_pred eecccCcccccceEEecCCc-----------ccCCCCCCCcCCCC-eeEEecCC-CC----C--CceEEEEecCCccccc
Confidence 99999999998765432110 11346899999998 99999863 32 2 5599999999999999
Q ss_pred cCC--hhh-------hcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 407 FKD--KES-------TRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 407 ~~~--~~~-------~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
+++ ++. +...+..+|||+|||+|++|+||+++++||.+|+||++|++|+|.|||+++.+++.+.+++|++.
T Consensus 568 ~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~l~~~~~~~~~avv~~ 647 (718)
T PRK08043 568 LRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSPDKQHATAIK 647 (718)
T ss_pred cCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHHHHhCCccceEEEEEc
Confidence 983 332 12222337899999999999999999999999999999999999999999999998999999999
Q ss_pred cCCCCCCC
Q 036361 478 PDKFWGET 485 (485)
Q Consensus 478 ~~~~~g~~ 485 (485)
+++.+||+
T Consensus 648 ~~~~~ge~ 655 (718)
T PRK08043 648 SDASKGEA 655 (718)
T ss_pred cCCCCCce
Confidence 99888863
No 79
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.6e-59 Score=470.72 Aligned_cols=425 Identities=25% Similarity=0.334 Sum_probs=344.0
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
..|+.++|..++ .|+++|+++.+.++||.||.++++++|+.|.+.|+ ++||+|+++++|+++++++++||+++|+++
T Consensus 2 ~~~~~~~l~~~~--~p~~~Al~~~~~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA~~~~Ga~~ 79 (540)
T PRK13388 2 RDTIAQLLRDRA--GDDTIAVRYGDRTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAAAALGGYVL 79 (540)
T ss_pred chhHHHHHHhhc--cCCceEEEECCceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHHHHhCCCEE
Confidence 357888887764 69999999999999999999999999999999999 899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|++|..+.+++..+++.++++++|++.+..+.+.+.. . ....++.++... +.++
T Consensus 80 v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~--~----~~~~~i~~~~~~-------------------~~~~ 134 (540)
T PRK13388 80 VGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD--L----PGVRVLDVDTPA-------------------YAEL 134 (540)
T ss_pred EEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc--c----cCceEEEccchh-------------------hhhh
Confidence 99999999999999999999999999887665543321 0 112333332110 1111
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHH-HHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYT-WGM 250 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~-~~~ 250 (485)
+...... .......++++++++|||||||.||+|.++|+++..........+++..+|+++..+|++|..++... +.+
T Consensus 135 ~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~ 213 (540)
T PRK13388 135 VAAAGAL-TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPA 213 (540)
T ss_pred hccccCc-CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHH
Confidence 1111110 11112456899999999999999999999999999888888888899999999999999999988764 457
Q ss_pred HhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCC--CCCCCceEEeccCCCChhhhhhhh-ccCCee
Q 036361 251 AAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFE--PLKTPVQILTAGAPPPAPVLSRTE-SMGFVV 327 (485)
Q Consensus 251 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i 327 (485)
+..|+++++.+.+++..+++.++++++|++..+|..+..+....... ....++. . .|+.++++..+++. .+++++
T Consensus 214 l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~~~~~~~l~~-~-~G~~~~~~~~~~~~~~~~~~l 291 (540)
T PRK13388 214 VASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATPERPDDADNPLRV-A-FGNEASPRDIAEFSRRFGCQV 291 (540)
T ss_pred HHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCccccccceEE-E-ECCCCCHHHHHHHHHHhCCce
Confidence 88899998888889999999999999999999999999988654221 2234443 3 36667777777777 569999
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeE-----------EecCCCCCcccCCCceecEEE
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVD-----------VVNPETGESVKRDGVSLGEVV 396 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~-----------i~~~~~~~~~~~g~~~~Gel~ 396 (485)
++.||+||++.++..... ....++|.|.+++ ++. ++| ++|+.+.+++ ..|||+
T Consensus 292 ~~~YG~tE~~~~~~~~~~-------------~~~~~vG~p~~g~-~i~~~~~~~~~~~~~~d-~~g~~~~~~~-~~GEl~ 355 (540)
T PRK13388 292 EDGYGSSEGAVIVVREPG-------------TPPGSIGRGAPGV-AIYNPETLTECAVARFD-AHGALLNADE-AIGELV 355 (540)
T ss_pred ecccccccccceeecCCC-------------CCCCCCCCCCCCc-EEEcCCCCccccceecc-CccccccCCC-cceEEE
Confidence 999999999876543210 1135788888875 432 333 2444443321 679999
Q ss_pred Ee-cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEE
Q 036361 397 LR-GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVV 475 (485)
Q Consensus 397 v~-~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~ 475 (485)
++ |++++.||+++++.+...|. +|||+|||+|++++||.++++||.+|+||++|++|+|.+||+++.++|+|.+|+|+
T Consensus 356 v~~g~~~~~gY~~~~~~t~~~~~-~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~v~ 434 (540)
T PRK13388 356 NTAGAGFFEGYYNNPEATAERMR-HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILLRHPAINRVAVY 434 (540)
T ss_pred EecCCcccccccCChHHHHHHhh-cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHHhCCCceEEEEE
Confidence 98 99999999999999988886 89999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCC
Q 036361 476 ARPDKFWGE 484 (485)
Q Consensus 476 ~~~~~~~g~ 484 (485)
+.+++..|+
T Consensus 435 g~~~~~~g~ 443 (540)
T PRK13388 435 AVPDERVGD 443 (540)
T ss_pred EccCCCCCc
Confidence 999988776
No 80
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=7.4e-60 Score=483.29 Aligned_cols=440 Identities=22% Similarity=0.305 Sum_probs=346.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHH
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNN---------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQF 82 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~l 82 (485)
...++.++++++++++|+++|+++.+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++++|
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~~~l 110 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVAGFF 110 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHHHHH
Confidence 34689999999999999999998632 4899999999999999999986 9999999999999999999999
Q ss_pred hhhccCceEEec-CCCCC--HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCc
Q 036361 83 GVPMSGAILNNI-NTRLD--AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 83 A~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 159 (485)
||+++|++++|+ ++..+ .+++.++++.++++++|++.+..+.+.+........ ....++.+++...
T Consensus 111 A~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~---------- 179 (612)
T PRK12476 111 AAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRL-RRPRVIAIDAIPD---------- 179 (612)
T ss_pred HHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccc-cCceEEEeccccc----------
Confidence 999999999999 57766 789999999999999999887666554443322210 1233444332110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC-CCCCCEEEEecch
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA-VPKQPVYLWTLPM 238 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~ 238 (485)
...... ......++++++++|||||||.||+|+++|+++..++......+. +.+++++++.+|+
T Consensus 180 --------------~~~~~~-~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~l~~~Pl 244 (612)
T PRK12476 180 --------------SAGESF-VPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHGVSWLPL 244 (612)
T ss_pred --------------cccccc-cCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceEEEeCCc
Confidence 000000 011235679999999999999999999999999887777666677 7888999999999
Q ss_pred hhHhHHHHHHHHHhhcceEeeccc--C--CHHHHHHHHH--hcCceeeecchHHHHHHhCCC------CCCCCCCCceEE
Q 036361 239 FHANGWGYTWGMAAVGATNICLRR--F--DASAISDLIQ--KHNVTHMCGAPVVLNMISNSP------DFEPLKTPVQIL 306 (485)
Q Consensus 239 ~~~~g~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~--~~~~t~~~~~p~~~~~l~~~~------~~~~l~~lr~i~ 306 (485)
+|..|+...+.+++.|+++++..+ + ++..+++.++ ++++|.+..+|.++..+.... ....++++| ++
T Consensus 245 ~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~l~~lr-~~ 323 (612)
T PRK12476 245 YHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPAEGDDIDLSNVV-LI 323 (612)
T ss_pred ccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChhhhcCcchhHhe-EE
Confidence 999999876666666766666542 3 8999999995 589999999999887776531 233578899 99
Q ss_pred eccCCCChhhhhhhhc-c---CC---eeeeccCCccccccccccCCCCCCC--CCChHH--------------Hhhhhhc
Q 036361 307 TAGAPPPAPVLSRTES-M---GF---VVCHGYGLTETAGLVVSCSWKPEWD--KLPLEE--------------RARLKAR 363 (485)
Q Consensus 307 ~~g~~l~~~~~~~~~~-~---~~---~i~~~Yg~tE~~~~~~~~~~~~~~~--~~~~~~--------------~~~~~~~ 363 (485)
+||+++++++.+++++ + |+ .+++.||+||++..++......... ...... ......+
T Consensus 324 ~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 403 (612)
T PRK12476 324 IGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVS 403 (612)
T ss_pred ecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEe
Confidence 9999999999999874 3 43 4899999999876544322110000 000000 0011247
Q ss_pred cCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccC------------------CCeeec
Q 036361 364 QGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISD------------------NGWFYT 425 (485)
Q Consensus 364 ~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------------------~~~~~T 425 (485)
+|+|.++. +++|+|+++++++++| +.|||+++|++++.||+++++.+...|.+ ++||+|
T Consensus 404 ~G~~~~g~-~v~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~T 480 (612)
T PRK12476 404 CGQVARSQ-WAVIVDPDTGAELPDG--EVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRT 480 (612)
T ss_pred CCCcCCCC-EEEEEeCCCCcCCCCC--CEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeec
Confidence 89999998 9999998669999999 88999999999999999999998887741 359999
Q ss_pred CceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhc-CcCcce--eEEEeccCCCCCC
Q 036361 426 GDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYS-NTAVNE--AAVVARPDKFWGE 484 (485)
Q Consensus 426 GD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~-~~~v~~--~~v~~~~~~~~g~ 484 (485)
||+|+++ ||+|+|+||.+|+||++|++|+|.+||++|.+ ||.|.+ ++|++.+++. ||
T Consensus 481 GDlg~~~-dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~~~v~v~~~~~~~-~~ 540 (612)
T PRK12476 481 GDLGVYL-DGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRRGYVTAFTVPAED-NE 540 (612)
T ss_pred cccceeE-CCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccCCcEEEEEecCCC-cc
Confidence 9999985 99999999999999999999999999999985 899999 7778888776 44
No 81
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=4.2e-60 Score=476.94 Aligned_cols=424 Identities=22% Similarity=0.241 Sum_probs=334.3
Q ss_pred hhHHHHHHHhhcCCCcEEEeCC----eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 16 TLGFLERAATAYSDCPSIVYNN----TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~----~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
+.+.|+++++++|+++|+.+.+ +++||+||.++++++|++|.+. ++||+|+|+++|++++++++|||+++|+++
T Consensus 4 ~~~~l~~~~~~~~~~~a~~~~~~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~~~G~~~ 81 (525)
T PRK05851 4 LAAALSDAMTASGRDLVVLDRESGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAWLAGAAV 81 (525)
T ss_pred HHHHHHHHhcCCCCceEEeCCCCCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHHHcCCCC
Confidence 7788999999999999999987 7899999999999999999988 899999999999999999999999999986
Q ss_pred EecCCC--------CCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccc
Q 036361 92 NNINTR--------LDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVD 163 (485)
Q Consensus 92 v~l~~~--------~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (485)
+++ +. ...+++..+++.++++++|++....+.+...... +.+.+..
T Consensus 82 ~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~----------~~~~~~~--------------- 135 (525)
T PRK05851 82 SIL-PGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDSS----------VTVHDLA--------------- 135 (525)
T ss_pred cCC-CCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhcc----------ccccccc---------------
Confidence 543 32 2234556678999999999987655443322110 0010000
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCC-CCCEEEEecchhhHh
Q 036361 164 FIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVP-KQPVYLWTLPMFHAN 242 (485)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~ 242 (485)
..... .... ...+..++++++++|||||||.||+|+++|+++..++......+++. ++|++++.+|++|.+
T Consensus 136 ------~~~~~-~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 207 (525)
T PRK05851 136 ------TAAHT-NRSA-SLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDM 207 (525)
T ss_pred ------ccccc-cccc-cCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCc
Confidence 00000 0000 00123567999999999999999999999999999888888888888 899999999999999
Q ss_pred HHHHHHHHHhhcceEeecc--cC--CHHHHHHHHHhcCceeeecchHHHHHHhCCC---CCCCCCCCceEEeccCCCChh
Q 036361 243 GWGYTWGMAAVGATNICLR--RF--DASAISDLIQKHNVTHMCGAPVVLNMISNSP---DFEPLKTPVQILTAGAPPPAP 315 (485)
Q Consensus 243 g~~~~~~~l~~G~~~~~~~--~~--~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---~~~~l~~lr~i~~~g~~l~~~ 315 (485)
++..++.+++.|+++++.+ .+ ++..+++.++++++|.+..+|.++..+.+.. ....++++|.++++|++++++
T Consensus 208 g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~~~~~~l~~lr~~~~gG~~l~~~ 287 (525)
T PRK05851 208 GLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARRVSDVDLGALRVALNGGEPVDCD 287 (525)
T ss_pred cHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhccccCCCHHHhheeEeccccCCHH
Confidence 9988889999999999876 34 6788999999999998866665555554322 234578999999999999999
Q ss_pred hhhhhhc----cCC---eeeeccCCccccccccccCCCCCCC--CC--ChHHHhhhhhccCccccCcceeEEecCCCCCc
Q 036361 316 VLSRTES----MGF---VVCHGYGLTETAGLVVSCSWKPEWD--KL--PLEERARLKARQGVKTVGLTEVDVVNPETGES 384 (485)
Q Consensus 316 ~~~~~~~----~~~---~i~~~Yg~tE~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~ 384 (485)
+.+++.+ +++ .+++.||+||++..+.......... .. +.........++|+|.+++ +++|+|++.+.+
T Consensus 288 ~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~-~v~i~d~~~~~~ 366 (525)
T PRK05851 288 GFERFATAMAPFGFDAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGM-EVRISPGDGAAG 366 (525)
T ss_pred HHHHHHHHHhhcCCChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCc-EEEEECCCCCcc
Confidence 9888864 344 4999999999976554322110000 00 0000112235789999998 999999766667
Q ss_pred ccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh
Q 036361 385 VKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY 464 (485)
Q Consensus 385 ~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~ 464 (485)
++.| +.|||+++|++++.||+++++.+ .++||+|||+|+++ +|.|+|+||.+|+||++|++|+|.+||++|.
T Consensus 367 ~~~g--~~GEl~v~g~~~~~GY~~~~~~~-----~~~~~~TGDl~~~~-~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~ 438 (525)
T PRK05851 367 VAGR--EIGEIEIRGASMMSGYLGQAPID-----PDDWFPTGDLGYLV-DGGLVVCGRAKELITVAGRNIFPTEIERVAA 438 (525)
T ss_pred CCCC--CeEEEEEecCchhhccccCCccC-----CCCceeccceEEEE-CCEEEEEeecCCEEEECCEEeCHHHHHHHHH
Confidence 8888 88999999999999999987642 37899999999997 8999999999999999999999999999999
Q ss_pred cCcCcceeEEEeccCCCCCC
Q 036361 465 SNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 465 ~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|.+|+|++.+++..|+
T Consensus 439 ~~p~V~~~~vv~~~~~~~~~ 458 (525)
T PRK05851 439 QVRGVREGAVVAVGTGEGSA 458 (525)
T ss_pred hCCCcccceEEEEEecCCCC
Confidence 99999999999999887775
No 82
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=4.3e-59 Score=474.35 Aligned_cols=454 Identities=23% Similarity=0.309 Sum_probs=362.4
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~-~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
..++.++|+++++.+|+++|+++.++++||.||.++++++|+.|+ +.|+++||+|+++++|++++++++|||+++|+++
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~~~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 103 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTV 103 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEECCceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHhCeEE
Confidence 468999999999999999999999999999999999999999997 5899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCccc--ccC----------ccCCCc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAA--SST----------TTTSPT 159 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~~~----------~~~~~~ 159 (485)
+|++|..+.+++..+++.+++++++++......+.+.....+ ...++..+..... ... ......
T Consensus 104 v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (560)
T PRK08751 104 VNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTP----VKQVITTGLGDMLGFPKAALVNFVVKYVKKLVPE 179 (560)
T ss_pred eccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCCC----ccEEEEechhhhcccccchhhhhhhhhhhccccc
Confidence 999999999999999999999999999877666555433221 2233332110000 000 000000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC----CCC-CCEEEE
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA----VPK-QPVYLW 234 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~----~~~-~~~~~~ 234 (485)
........+.+................++++++++|||||||.||+|.++|.++..++......+. +.. .+++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (560)
T PRK08751 180 YRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGTGKLEEGCEVVIT 259 (560)
T ss_pred cCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccccccCCCCceEEE
Confidence 000111112222111111111122345689999999999999999999999999887766555443 233 357788
Q ss_pred ecchhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccC
Q 036361 235 TLPMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGA 310 (485)
Q Consensus 235 ~~p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~ 310 (485)
..|++|.+++.. .+.++..|++.++.. .+++..+++.++++++|++..+|.++..+.+.. ...+++++|.+++||+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~l~~lr~v~~gG~ 339 (560)
T PRK08751 260 ALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGM 339 (560)
T ss_pred ecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHcCcCcCCcchhhheeeeeCCC
Confidence 899999998764 456666777766654 578999999999999999999999999998765 2345679999999999
Q ss_pred CCChhhhhhhhc-cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCC
Q 036361 311 PPPAPVLSRTES-MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDG 389 (485)
Q Consensus 311 ~l~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~ 389 (485)
++++.+.+.+++ +++.+++.||+||+++.++.+.... ....+++|.+.++. .++++|+ ++++++.|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~vG~~~~~~-~v~i~d~-~~~~~~~g- 406 (560)
T PRK08751 340 AVQRSVAERWKQVTGLTLVEAYGLTETSPAACINPLTL----------KEYNGSIGLPIPST-DACIKDD-AGTVLAIG- 406 (560)
T ss_pred CCCHHHHHHHHHHhCCeEEEeeccccCCCceecccccc----------cccCCCcCccCCCc-eEEEECC-CCCCCCCC-
Confidence 999999999884 5899999999999987655432110 11235789999998 9999995 78899988
Q ss_pred ceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCc
Q 036361 390 VSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAV 469 (485)
Q Consensus 390 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v 469 (485)
+.|||+++|+.++.||+++++.+...+..+|||+|||+|+++++|.+++.||.+|+|+++|.+++|.+||+.|.++++|
T Consensus 407 -~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD~~~~~~~g~l~i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v 485 (560)
T PRK08751 407 -EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIAMMPGV 485 (560)
T ss_pred -CceEEEEecCccchhhcCChhhhhhccccCCCccccceEEEcCCceEEEEeechhheeECCEEEcHHHHHHHHHhCcCe
Confidence 7899999999999999999999988887789999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEeccCCCCCC
Q 036361 470 NEAAVVARPDKFWGE 484 (485)
Q Consensus 470 ~~~~v~~~~~~~~g~ 484 (485)
.+++|++.+++..|+
T Consensus 486 ~~~~v~~~~~~~~ge 500 (560)
T PRK08751 486 LEVAAVGVPDEKSGE 500 (560)
T ss_pred eeeEEEecCCCCCCc
Confidence 999999999987776
No 83
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=1.5e-58 Score=468.29 Aligned_cols=453 Identities=26% Similarity=0.371 Sum_probs=359.0
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
.+.++.++|+++++.+|+++|+.+.++++||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|+++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~la~~~~G~~~ 98 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFRDRPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFFGALKAGARV 98 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEECCcEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHhcCeEE
Confidence 35689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcc--hHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLH--SSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+|++|..+.+++.++++.++++++|++... .+...+.... . ....+++.+......................++
T Consensus 99 v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (541)
T TIGR03205 99 VHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK-G---LLDRLIVCEDDNWGKVGTPQAPIPADPRIVTYA 174 (541)
T ss_pred EecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc-c---cceEEEEecccccccccccccccCCCcccccHH
Confidence 999999999999999999999999998632 1111111111 0 123344443321100000000000001122233
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh------CCCCCCEEEEecchhhHhH
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW------AVPKQPVYLWTLPMFHANG 243 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~------~~~~~~~~~~~~p~~~~~g 243 (485)
+........ .......++++++++|||||||.||+|.++|+++....... ..+ .....+++++..|++|.++
T Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~~~~ 252 (541)
T TIGR03205 175 DFVKGAAAP-AEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLPLFHIYA 252 (541)
T ss_pred HHHhcCCCC-CCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEeccHHHHHH
Confidence 333221111 11123456799999999999999999999999987544322 221 2234578999999999988
Q ss_pred HHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhh
Q 036361 244 WGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 244 ~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
+.. ++.++..|+++++.+.+++..+++.|+++++|++.++|+++..+.+.. ....++++|.++.||+++++++.+++
T Consensus 253 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~i~~gg~~~~~~~~~~~ 332 (541)
T TIGR03205 253 LTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALANDPSLEKRDLSSLATIGSGGAPLPVEVANFF 332 (541)
T ss_pred HHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhCccccccCccccceEEEccccCCHHHHHHH
Confidence 765 677888899988888889999999999999999999999999988654 23456789999999999999999888
Q ss_pred h-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEec-CCCCCcccCCCceecEEEEe
Q 036361 321 E-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVN-PETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 321 ~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~-~~~~~~~~~g~~~~Gel~v~ 398 (485)
. .++.++++.||+||++.+++.+..... ....++|.+.+++ .++|++ .+++++++.| +.|||+++
T Consensus 333 ~~~~~~~~~~~YG~TE~~~~~~~~~~~~~----------~~~~~~G~~~~~~-~~~v~~~d~~~~~~~~g--~~Gel~v~ 399 (541)
T TIGR03205 333 ERKTGLKLKSGWGMTETCSPGTGHPPEGP----------DKPGSIGLMLPGI-ELDVVSLDDPTKVLPPG--EVGELRIR 399 (541)
T ss_pred HHHhCCCeecccccccCCcccccCCCCCC----------CCCCCcceeccCc-eeEEEecCCCCccCCCC--CeeEEEEe
Confidence 7 468999999999999876665431110 1235789999888 888764 2467888888 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|++++.||+++++.+...|. ++||+|||++++++||.++++||.+|+||++|++++|.+||+.+.++++|.+++|++.+
T Consensus 400 ~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~~g~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~~~v~~~~ 478 (541)
T TIGR03205 400 GPNVTRGYWNRPEESAEAFV-GDRFLTGDIGYMDTDGYFFLVDRKKDMIISGGFNVYPQMIEQAIYEHPGVQEVIVIGIP 478 (541)
T ss_pred cCCccccccCChhhhHhhhc-cCCcccCceEEEcCCceEEEEccccCeEEECCEEECHHHHHHHHHhCCCeeeEEEEecC
Confidence 99999999999999888887 78999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 479 ~~~~~~ 484 (541)
T TIGR03205 479 DQYRGE 484 (541)
T ss_pred CcccCc
Confidence 887665
No 84
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-58 Score=474.60 Aligned_cols=440 Identities=21% Similarity=0.220 Sum_probs=345.1
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+.++.++|.++++.+|+++|+++.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~lA~~~~G~~ 113 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLFEDQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAWLGLAKLGAV 113 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEeCCCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHhcCcE
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++++++..+.+++.++++.++++++|++.+..+.+.+...... ....++..++... .. ......+.+
T Consensus 114 ~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~---------~~~~~~~~~ 180 (600)
T PRK08279 114 VALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADLA---RPPRLWVAGGDTL-DD---------PEGYEDLAA 180 (600)
T ss_pred EeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhhc---ccceEEEecCccc-cc---------cccHHHHhh
Confidence 9999999999999999999999999999887776665544332 2222222222110 00 011111111
Q ss_pred ccccCCCC-CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HH
Q 036361 171 FVEEGDPK-YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TW 248 (485)
Q Consensus 171 ~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~ 248 (485)
........ ........++++++++|||||||.||+|++||+++..++.+....+.+.++|++++.+|++|.+++.. ++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~~~~ 260 (600)
T PRK08279 181 AAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTVAWS 260 (600)
T ss_pred hcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHHHHH
Confidence 11111110 11122345689999999999999999999999999999988888889999999999999999999876 45
Q ss_pred HHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCC--CCCCCceEEeccCCCChhhhhhhh-ccCC
Q 036361 249 GMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFE--PLKTPVQILTAGAPPPAPVLSRTE-SMGF 325 (485)
Q Consensus 249 ~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~l~~lr~i~~~g~~l~~~~~~~~~-~~~~ 325 (485)
.++..|+++++.+.+++..+++.++++++|++.++|++++.+.+..... ...++|. ++|+.+++++++++. .++.
T Consensus 261 ~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~~~~~~~l~~--~~g~~l~~~~~~~~~~~~~~ 338 (600)
T PRK08279 261 SVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPKPTDRDHRLRL--MIGNGLRPDIWDEFQQRFGI 338 (600)
T ss_pred HHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCccccCcceeE--EecCCCCHHHHHHHHHHhCc
Confidence 5677888888888899999999999999999999999999998765222 2344554 457889999999988 5565
Q ss_pred -eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCcccc----Ccc--------eeEEecCCC-CCcccCCCce
Q 036361 326 -VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTV----GLT--------EVDVVNPET-GESVKRDGVS 391 (485)
Q Consensus 326 -~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~----~~~--------~~~i~~~~~-~~~~~~g~~~ 391 (485)
.+++.||+||++..+.... ....++|.+.. +.. ...+.+.+. ..++++| +
T Consensus 339 ~~l~~~YG~tE~~~~~~~~~--------------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~g--~ 402 (600)
T PRK08279 339 PRILEFYAASEGNVGFINVF--------------NFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRDADGRCIKVKPG--E 402 (600)
T ss_pred ceeeeeecccccceeecccC--------------CCCcccccccccccccceeeeeccCcCceeeCCCCccccCCCC--C
Confidence 5999999999875332211 01124454433 220 122223211 1245666 7
Q ss_pred ecEEE--EecCcccccccCChhhhccccc------CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHH
Q 036361 392 LGEVV--LRGGCVTVGYFKDKESTRRCIS------DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVL 463 (485)
Q Consensus 392 ~Gel~--v~~~~~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l 463 (485)
.|||+ +.+++++.|| ++++.+...|. .++||+|||+|++++||.+++.||.+|+||++|++|+|.|||+++
T Consensus 403 ~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik~~G~~i~p~eIE~~l 481 (600)
T PRK08279 403 VGLLIGRITDRGPFDGY-TDPEASEKKILRDVFKKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFRWKGENVATTEVENAL 481 (600)
T ss_pred ceeEEEEecCccccccc-CCchhhHHHHhhcccCCCCceEeecceEEEcCCccEEEecccCCeEEECCcccCHHHHHHHH
Confidence 89998 6799999999 88877766542 257999999999999999999999999999999999999999999
Q ss_pred hcCcCcceeEEEeccCCCC
Q 036361 464 YSNTAVNEAAVVARPDKFW 482 (485)
Q Consensus 464 ~~~~~v~~~~v~~~~~~~~ 482 (485)
.++|+|.+|+|++.+++..
T Consensus 482 ~~~p~V~~a~v~gv~~~~~ 500 (600)
T PRK08279 482 SGFPGVEEAVVYGVEVPGT 500 (600)
T ss_pred hcCCCcceEEEEEeecCCC
Confidence 9999999999999986643
No 85
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=8.5e-59 Score=478.63 Aligned_cols=446 Identities=17% Similarity=0.204 Sum_probs=342.5
Q ss_pred cchh-HHHHHHHhhcCCCcEEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 14 LTTL-GFLERAATAYSDCPSIVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 14 ~tl~-~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
.++. ..|++++..+|+++|+++.+ +++||+||.++++++|+.|++.|+++||+|+++++|++++++++|||
T Consensus 174 ln~~~~~l~~~~~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 174 LNVAECCLTPKPSKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred eEHHHHHHHHHhccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 3443 35666666789999999854 47999999999999999999999999999999999999999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch------HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCC
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS------SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSP 158 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 158 (485)
+++|++++|++|..+.+++.+++++++++++|+++... +......... ...++++......... ..
T Consensus 254 ~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~-----~~~~iv~~~~~~~~~~-~~-- 325 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAK-----APKAIVLPADGKSVRV-KL-- 325 (728)
T ss_pred HHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhc-----CCcEEEEeCCCCcccc-cc--
Confidence 99999999999999999999999999999999976432 1111221111 1233333321100000 00
Q ss_pred ccccccccccccccccCCC---CCCC-CCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEE
Q 036361 159 TVTVDFIDTYEGFVEEGDP---KYKW-VRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLW 234 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (485)
......|++++..... .... .....++++++|+|||||||.||+|+++|.+++..+......+.++++|++++
T Consensus 326 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~ 402 (728)
T PLN03052 326 ---REGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCW 402 (728)
T ss_pred ---ccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEE
Confidence 0011234433322111 0001 11234689999999999999999999999998776665555678899999999
Q ss_pred ecchhhHhHHHHHHHHHhhcceEeeccc-CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCC
Q 036361 235 TLPMFHANGWGYTWGMAAVGATNICLRR-FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAP 311 (485)
Q Consensus 235 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~ 311 (485)
..++.|.++...++.++..|+++++.+. .++..+++.++++++|++..+|++++.|.+.. +..+++++|.++++|++
T Consensus 403 ~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~Ge~ 482 (728)
T PLN03052 403 PTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGSTGEA 482 (728)
T ss_pred CCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEecCCC
Confidence 9999999998777899999999999874 46678999999999999999999999998654 34578899999999999
Q ss_pred CChhhhhhhh-ccC-CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCC
Q 036361 312 PPAPVLSRTE-SMG-FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDG 389 (485)
Q Consensus 312 l~~~~~~~~~-~~~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~ 389 (485)
++++...++. .++ .++.+.||+||+++.+....... ....+++|.|.+++ +++|+|+ +|++++.|.
T Consensus 483 l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~----------~~~~g~~g~p~~g~-~v~v~d~-~g~~v~~g~ 550 (728)
T PLN03052 483 SSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQ----------PQAFAAFSTPAMGC-KLFILDD-SGNPYPDDA 550 (728)
T ss_pred CCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCC----------CCCCCccccCCCCc-eEEEECC-CCCCCCCCC
Confidence 9999877766 334 57999999999986544322100 01235789999999 9999995 799998873
Q ss_pred ceecEEEEecCc--ccccccCChhhhccccc------CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 390 VSLGEVVLRGGC--VTVGYFKDKESTRRCIS------DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 390 ~~~Gel~v~~~~--~~~gy~~~~~~~~~~~~------~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
.+.|||+++++. ...+|+++.. ....|. ...||+|||++++|+||.++++||.||+||++|++|++.|||+
T Consensus 551 ~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~ 629 (728)
T PLN03052 551 PCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIER 629 (728)
T ss_pred CceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHH
Confidence 236999998653 3345665532 222221 1238999999999999999999999999999999999999999
Q ss_pred HHh-cCcCcceeEEEeccCCCCC
Q 036361 462 VLY-SNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 462 ~l~-~~~~v~~~~v~~~~~~~~g 483 (485)
+|. .||+|.+++|++.+++..|
T Consensus 630 ~l~~~~p~V~eaaVvg~~d~~~g 652 (728)
T PLN03052 630 VCNAADESVLETAAIGVPPPGGG 652 (728)
T ss_pred HHHhcCCCcceEEEEeeecCCCC
Confidence 995 7999999999999998776
No 86
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-58 Score=466.30 Aligned_cols=461 Identities=23% Similarity=0.265 Sum_probs=365.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...++.++|+++++.+|+++|+.+.++++||.||.+++.++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 31 ~~~~l~~~l~~~a~~~p~~~al~~~~~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~ 110 (567)
T PRK06178 31 GERPLTEYLRAWARERPQRPAIIFYGHVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFHIVFFGILKLGAVH 110 (567)
T ss_pred CcccHHHHHHHHHHHCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHHHHHHHHHHhCeEE
Confidence 34689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCccccc--CccCCCccc--cccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASS--TTTTSPTVT--VDFIDT 167 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~--~~~~~~ 167 (485)
+|++|..+.+++.++++.++++++++++...+.+.+..... ....++.......... ......... ......
T Consensus 111 v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (567)
T PRK06178 111 VPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET----SLRHVIVTSLADVLPAEPTLPLPDSLRAPRLAAAG 186 (567)
T ss_pred eecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC----CcceEEEeccccccccccccccccccccccccccc
Confidence 99999999999999999999999999988877766554332 1233333321110000 000000000 000001
Q ss_pred cccccccCC--CCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH-HhCCCCCCEEEEecchhhHhHH
Q 036361 168 YEGFVEEGD--PKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI-DWAVPKQPVYLWTLPMFHANGW 244 (485)
Q Consensus 168 ~~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~g~ 244 (485)
+.++..... .......+..++++++++|||||||.||+|++||+++..+...... .....+++++++.+|++|.+|+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~ 266 (567)
T PRK06178 187 AIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVFLSFLPEFWIAGE 266 (567)
T ss_pred cccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEEEEecchHHHHHH
Confidence 111111111 1111122345789999999999999999999999999876655443 3567889999999999999998
Q ss_pred H-HHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEe--ccCCCChhhhhh
Q 036361 245 G-YTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILT--AGAPPPAPVLSR 319 (485)
Q Consensus 245 ~-~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~--~g~~l~~~~~~~ 319 (485)
. .++.++..|+++++.+.+++..++..++++++|.+.++|..+..+.... ....+++++.+.. .++.++++..+.
T Consensus 267 ~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 346 (567)
T PRK06178 267 NFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDHPRFAEYDLSSLRQVRVVSFVKKLNPDYRQR 346 (567)
T ss_pred HHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCCCCCCcchheeeeeccccccCCHHHHHH
Confidence 5 4778899999999999999999999999999999999999999887654 2234567777654 358899999999
Q ss_pred hhc-cCCeeee-ccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEE
Q 036361 320 TES-MGFVVCH-GYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVL 397 (485)
Q Consensus 320 ~~~-~~~~i~~-~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v 397 (485)
+++ ++..++. .||+||++..+.......... ........++|.|.+++ +++|+|++++++++.| +.|||++
T Consensus 347 ~~~~~g~~~~~~~YG~tE~~~~~~~~~~~~~~~----~~~~~~~~~vG~p~~g~-~v~v~d~~~~~~~~~g--~~Gel~v 419 (567)
T PRK06178 347 WRALTGSVLAEAAWGMTETHTCDTFTAGFQDDD----FDLLSQPVFVGLPVPGT-EFKICDFETGELLPLG--AEGEIVV 419 (567)
T ss_pred HHHHhCCcccccccccccccccceeccccccCc----cccccCCcccccccCCc-EEEEEcCCCCCcCCCC--CceEEEE
Confidence 884 5766664 799999976544322111000 00012345789999998 9999998789999998 7899999
Q ss_pred ecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 398 RGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 398 ~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
+|++++.||+++++.+...|. +|||+|||++++++||.++++||.+|+|+.+|.+++|.+||+++.++++|.+++|++.
T Consensus 420 ~g~~v~~gY~~~~~~~~~~~~-dg~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~eiE~~l~~~~~v~~~~v~~~ 498 (567)
T PRK06178 420 RTPSLLKGYWNKPEATAEALR-DGWLHTGDIGKIDEQGFLHYLGRRKEMLKVNGMSVFPSEVEALLGQHPAVLGSAVVGR 498 (567)
T ss_pred ECCcccccccCChhhhhhccc-CCceeecceEEEecCCeEEEEecccccEEECCEEECHHHHHHHHHhCCCeeEEEEEcC
Confidence 999999999999998888887 8899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 036361 478 PDKFWGE 484 (485)
Q Consensus 478 ~~~~~g~ 484 (485)
+++..|+
T Consensus 499 ~~~~~g~ 505 (567)
T PRK06178 499 PDPDKGQ 505 (567)
T ss_pred cCcccCc
Confidence 9887765
No 87
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=4.5e-59 Score=517.37 Aligned_cols=423 Identities=18% Similarity=0.184 Sum_probs=358.4
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..++.++|+++++.+|+++|+.+.++++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 457 ~~~l~~~~~~~~~~~p~~~Al~~~~~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la~~~~G~~~v 536 (1296)
T PRK10252 457 ETTLSALVAQQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHAIVEAGAAWL 536 (1296)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEcCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|++|..+.+++.++++.+++++++++......+.+. . ...+...+.. .
T Consensus 537 pld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~----~----~~~~~~~~~~------------------------~ 584 (1296)
T PRK10252 537 PLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV----P----DLTSLCYNAP------------------------L 584 (1296)
T ss_pred ecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC----C----Cceeeecccc------------------------c
Confidence 999999999999999999999999987654332110 0 0011111100 0
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.... ........++++++++|||||||.||+|+++|+++.+.+.+....+++.+++++++..|++|..++..++.++.
T Consensus 585 ~~~~--~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~ 662 (1296)
T PRK10252 585 APQG--AAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSVWEFFWPFI 662 (1296)
T ss_pred cccc--CCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhHHHHHHHHh
Confidence 0000 00111235679999999999999999999999999999998888899999999999999999999888899999
Q ss_pred hcceEeecc---cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC----CCCCCCceEEeccCCCChhhhhhhhc-cC
Q 036361 253 VGATNICLR---RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF----EPLKTPVQILTAGAPPPAPVLSRTES-MG 324 (485)
Q Consensus 253 ~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~l~~lr~i~~~g~~l~~~~~~~~~~-~~ 324 (485)
.|+++++.+ ..++..+++.++++++|++.++|+++..+++.... ..++++|.+++||+++++++.+.+.+ ++
T Consensus 663 ~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~ 742 (1296)
T PRK10252 663 AGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEALPADLCREWQQLTG 742 (1296)
T ss_pred CCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCCCCHHHHHHHHhcCC
Confidence 999999976 36899999999999999999999999998866422 24578999999999999999999884 58
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
+++++.||+||++..++......... ........++|+|.++. .+.|+|+ .++++++| ..|||+++|+++++
T Consensus 743 ~~l~n~YG~TE~~~~~~~~~~~~~~~----~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~g--~~Gel~i~g~~~~~ 814 (1296)
T PRK10252 743 APLHNLYGPTEAAVDVSWYPAFGEEL----AAVRGSSVPIGYPVWNT-GLRILDA-RMRPVPPG--VAGDLYLTGIQLAQ 814 (1296)
T ss_pred CEEEeCCCcchhhheeeeeecccccc----cccCCCCCCcccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccch
Confidence 99999999999986655443211100 00011235789999998 9999995 89999999 88999999999999
Q ss_pred cccCChhhhcccccCC------CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 405 GYFKDKESTRRCISDN------GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~------~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
||+++++.+...|..+ +||+|||+|++++||.++++||.|++||++|++|++.|||++|.++|+|.+++|++.
T Consensus 815 GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~a~v~~~ 893 (1296)
T PRK10252 815 GYLGRPDLTASRFIADPFAPGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQAVTHAC 893 (1296)
T ss_pred hhCCCcccchhhcccCCCCCCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccceEEEEE
Confidence 9999999998888543 399999999999999999999999999999999999999999999999999987754
No 88
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-58 Score=468.49 Aligned_cols=452 Identities=27% Similarity=0.408 Sum_probs=358.5
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
.++.+++.+.++.+|+++|+++.++.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 24 ~~~~~~~~~~a~~~p~~~a~~~~~~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~vp 103 (563)
T PRK06710 24 QPLHKYVEQMASRYPEKKALHFLGKDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYYGTLLAGGIVVQ 103 (563)
T ss_pred ccHHHHHHHHHHHCCCceEEEecCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHHHHHHcCeEEec
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcc-cccC-ccC------CCc----c-
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAA-ASST-TTT------SPT----V- 160 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~-~~~------~~~----~- 160 (485)
++|..+.+++..+++.+++++++++......+....... ....+++...... ..+. ... ... .
T Consensus 104 i~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (563)
T PRK06710 104 TNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSAT----KIEHVIVTRIADFLPFPKNLLYPFVQKKQSNLVVKVS 179 (563)
T ss_pred cCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchhh----ccceeEEeccccccccccccccchhhccccccccccc
Confidence 999999999999999999999999876544433221110 1122222110000 0000 000 000 0
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH-hCCC-CCCEEEEecch
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID-WAVP-KQPVYLWTLPM 238 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~-~~~~-~~~~~~~~~p~ 238 (485)
.......++.......... .......+++++++|||||||.||+|.++|+++..++...... +... .++++++..|+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~p~ 258 (563)
T PRK06710 180 ESETIHLWNSVEKEVNTGV-EVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNCKEGEEVVLGVLPF 258 (563)
T ss_pred ccchhhhhhhhhhcccccc-ccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCCCCCCceEEEeCch
Confidence 0000001111111110000 0111235789999999999999999999999987655443332 2333 45688999999
Q ss_pred hhHhHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChh
Q 036361 239 FHANGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAP 315 (485)
Q Consensus 239 ~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~ 315 (485)
+|.+++.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....++++|.++++|++++++
T Consensus 259 ~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~v~~gg~~~~~~ 338 (563)
T PRK06710 259 FHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLLKEYDISSIRACISGSAPLPVE 338 (563)
T ss_pred HHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcCCccccCChhhhhheeeCCCcCCHH
Confidence 99998865 566888999999988899999999999999999999999999998754 334568999999999999999
Q ss_pred hhhhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecE
Q 036361 316 VLSRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGE 394 (485)
Q Consensus 316 ~~~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Ge 394 (485)
+.+++. .++..+++.||+||++.++...... ......++|.+.++. .+++++++++.+++.| +.||
T Consensus 339 ~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~~G~~~~~~-~~~i~~~~~~~~~~~g--~~Ge 405 (563)
T PRK06710 339 VQEKFETVTGGKLVEGYGLTESSPVTHSNFLW----------EKRVPGSIGVPWPDT-EAMIMSLETGEALPPG--EIGE 405 (563)
T ss_pred HHHHHHHhhCCCEecccccccCccccccCccc----------ccccCCccCCCCCCC-eEEEEECCCCccCCCC--CceE
Confidence 999988 4689999999999998765432110 011235789999997 9999998789999999 7899
Q ss_pred EEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEE
Q 036361 395 VVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAV 474 (485)
Q Consensus 395 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v 474 (485)
|+++|+.++.||+++++.+...+. ++||+|||+++++++|.++++||.+|+|+++|.+|+|.+||+.+.++|+|.+++|
T Consensus 406 l~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGD~~~~~~~g~~~~~GR~dd~i~~~G~~v~p~eiE~~l~~~~~v~~~~v 484 (563)
T PRK06710 406 IVVKGPQIMKGYWNKPEETAAVLQ-DGWLHTGDVGYMDEDGFFYVKDRKKDMIVASGFNVYPREVEEVLYEHEKVQEVVT 484 (563)
T ss_pred EEEecCccchhhhCChHHHhhhcc-cCcccccceEEEcCCCcEEEeeccccEEEECCEEECHHHHHHHHHhCcceeeEEE
Confidence 999999999999999999888886 8999999999999999999999999999999999999999999999999999999
Q ss_pred EeccCCCCCC
Q 036361 475 VARPDKFWGE 484 (485)
Q Consensus 475 ~~~~~~~~g~ 484 (485)
++.+++..|+
T Consensus 485 ~~~~~~~~g~ 494 (563)
T PRK06710 485 IGVPDPYRGE 494 (563)
T ss_pred EccccCCcCc
Confidence 9999987775
No 89
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=7.4e-59 Score=548.96 Aligned_cols=428 Identities=20% Similarity=0.237 Sum_probs=365.0
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...+++++|+++++++|+++|+++.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|+++
T Consensus 510 ~~~~~~~~~~~~a~~~pd~~Al~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lail~aG~~~ 589 (3956)
T PRK12467 510 APDCVHQLIEAQARQHPERPALVFGEQVLSYAELNRQANRLAHVLIAAGVGPDVLVGIAVERSIEMVVGLLAVLKAGGAY 589 (3956)
T ss_pred CCCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCcEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|++|..+.+++.++++.+++++++++.+....+. .. .....+.++.... .
T Consensus 590 vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~----~~----~~~~~~~~~~~~~---------------------~ 640 (3956)
T PRK12467 590 VPLDPEYPQDRLAYMLDDSGVRLLLTQSHLLAQLP----VP----AGLRSLCLDEPAD---------------------L 640 (3956)
T ss_pred eccCCCChHHHHHHHHHhcCCCEEEechhhhhhcc----cc----cCccEEEeccccc---------------------c
Confidence 99999999999999999999999999874332210 00 1112222221110 0
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMA 251 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 251 (485)
.... .......+..++++++++|||||||.||+|+++|+++.+.+.+....+++.++++++...|++|..++..++.++
T Consensus 641 ~~~~-~~~~~~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L 719 (3956)
T PRK12467 641 LCGY-SGHNPEVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGVTELFGAL 719 (3956)
T ss_pred cccc-CCCCCCCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHHHHHHHHH
Confidence 0000 001111234578999999999999999999999999999998888889999999999999999999998899999
Q ss_pred hhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhcc--CCe
Q 036361 252 AVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESM--GFV 326 (485)
Q Consensus 252 ~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~--~~~ 326 (485)
..|+++++.+. +++..+++.|+++++|++.++|++++.|.+........++|.+++||+++++++.+++.+. +++
T Consensus 720 ~~G~~lv~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~~~~~ 799 (3956)
T PRK12467 720 ASGATLHLLPPDCARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVALPRPQRALVCGGEALQVDLLARVRALGPGAR 799 (3956)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhccccCCcccEEEEEeecCCHHHHHHHHHhCCCCE
Confidence 99999999873 6899999999999999999999999999876655556778999999999999999999854 689
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++..++.+...... ......++|+|.+++ +++|+|+ .+++++.| +.|||+|+|+++++||
T Consensus 800 l~n~YG~TE~~~~~~~~~~~~~~-------~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~GY 868 (3956)
T PRK12467 800 LINHYGPTETTVGVSTYELSDEE-------RDFGNVPIGQPLANL-GLYILDH-YLNPVPVG--VVGELYIGGAGLARGY 868 (3956)
T ss_pred EEeCcCCChhhhheeeEeccccc-------ccCCCCcccCCcCCC-EEEEECC-CCCCCCCC--CceEEEecccccchhh
Confidence 99999999998766654321110 001125789999998 9999996 78999999 8899999999999999
Q ss_pred cCChhhhcccccCC-------CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 407 FKDKESTRRCISDN-------GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 407 ~~~~~~~~~~~~~~-------~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
+++++.+...|..+ +||+|||+|++++||.++|+||.||+||++|++|+|.|||+.|.++|+|.+|+|++.++
T Consensus 869 l~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~a~v~~~~~ 948 (3956)
T PRK12467 869 HRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVREAVVLAQPG 948 (3956)
T ss_pred cCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcceEEEEEEcC
Confidence 99999999888432 39999999999999999999999999999999999999999999999999999999665
Q ss_pred C
Q 036361 480 K 480 (485)
Q Consensus 480 ~ 480 (485)
+
T Consensus 949 ~ 949 (3956)
T PRK12467 949 D 949 (3956)
T ss_pred C
Confidence 4
No 90
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.4e-57 Score=457.88 Aligned_cols=433 Identities=23% Similarity=0.301 Sum_probs=360.4
Q ss_pred hHHHHHH-HhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecC
Q 036361 17 LGFLERA-ATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 17 ~~~l~~~-a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~ 95 (485)
.++++++ ++.+||++|+++.+..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|++++|++
T Consensus 7 ~~~~~~~~~~~~p~~~a~~~~~~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a~~~~G~~~v~l~ 86 (508)
T TIGR02262 7 EDLLDRNVVEGRGGKTAFIDDISSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLGAIRAGIVPVALN 86 (508)
T ss_pred HHHHHHHHhcccCCceEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEeecc
Confidence 4566665 677999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccC
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEG 175 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (485)
+..+.+++.++++.+++++++++.+..+.+.+.....+ ....++..+... .....+.+.....
T Consensus 87 ~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~--------------~~~~~~~~~~~~~ 149 (508)
T TIGR02262 87 TLLTADDYAYMLEDSRARVVFVSGELLPVIKAALGKSP---HLEHRVVVGRPE--------------AGEVQLAELLATE 149 (508)
T ss_pred CCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHhcCC---CccEEEEeCCCC--------------cccccHHHHhhcC
Confidence 99999999999999999999999887776665544333 334444443221 0011122222111
Q ss_pred CCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHH-HHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHhh
Q 036361 176 DPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTAN-ALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAAV 253 (485)
Q Consensus 176 ~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~ 253 (485)
.... ......++++++++|||||||.||+|.++|+++...+.. ....++++++|+++..+|++|.+++.. ++.++..
T Consensus 150 ~~~~-~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~ 228 (508)
T TIGR02262 150 SEQF-KPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSV 228 (508)
T ss_pred CCcc-CCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHc
Confidence 1111 112345679999999999999999999999999877655 345567889999999999999998865 6677888
Q ss_pred cceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-ccCCeeee
Q 036361 254 GATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCH 329 (485)
Q Consensus 254 G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~ 329 (485)
|+++++.+ .+++..+++.|+++++|.+.++|.++..+.+.. ......++|.++++|+++++++.+.|. .+++++++
T Consensus 229 G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~ 308 (508)
T TIGR02262 229 GATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNLPAEDQVRLRLCTSAGEALPAEVGQRWQARFGVDIVD 308 (508)
T ss_pred CceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCccccccccccceeEEEcCCCCCHHHHHHHHHHhCCchhh
Confidence 99888876 468999999999999999999999998887654 233456899999999999999999998 56999999
Q ss_pred ccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCC
Q 036361 330 GYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKD 409 (485)
Q Consensus 330 ~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~ 409 (485)
.||+||++.++..+.... ....++|.|.++. .++|+| +++.++++| +.|||+++|++++.||+++
T Consensus 309 ~YG~tE~~~~~~~~~~~~-----------~~~~~~G~~~~g~-~v~i~d-~~~~~~~~g--~~Gel~i~~~~~~~gY~~~ 373 (508)
T TIGR02262 309 GIGSTEMLHIFLSNLPGD-----------VRYGTSGKPVPGY-RLRLVG-DGGQDVAAG--EPGELLISGPSSATMYWNN 373 (508)
T ss_pred CccccccCceeecCCccC-----------CCCCCcCCCCCCc-EEEEEC-CCCCCCCCC--CeeEEEEecCccccccCCC
Confidence 999999987655432110 1135789999998 999999 588999998 8899999999999999999
Q ss_pred hhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 410 KESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 410 ~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
++.+...|. ++||+|||+++++++|.++++||.+|+++.+|.++++.+||+.+.++++|.++++++.++...+
T Consensus 374 ~~~~~~~~~-~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~~~~~~~~~~~~~~ 446 (508)
T TIGR02262 374 RAKTRDTFQ-GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVLEAAVVGVEDEDGL 446 (508)
T ss_pred HHHhHhhhh-cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCeeEEEEEeccccCCC
Confidence 999888886 7999999999999999999999999999999999999999999999999999999998776544
No 91
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.6e-59 Score=460.83 Aligned_cols=397 Identities=27% Similarity=0.421 Sum_probs=319.7
Q ss_pred HHHHHhhcCCCcEEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC
Q 036361 20 LERAATAYSDCPSIVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 98 (485)
Q Consensus 20 l~~~a~~~p~~~a~~~-~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (485)
|+++|+++||++|+++ .++++||+||+++++++|..|.+.|+++||+|+++++|+++++++++||+++|++++|++|..
T Consensus 1 f~~~a~~~pd~~a~~~~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~~v~l~~~~ 80 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDDEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAIPVPLDPSL 80 (417)
T ss_dssp HHHHHHHSTTSEEEEETTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-EEEEEETTS
T ss_pred ChhHHhhCCCceEEEECCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccccccccccc
Confidence 6899999999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhhcCCcEEEE----cCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccccc
Q 036361 99 DAHNLSVLLQHSESKLVFV----DHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEE 174 (485)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~----~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (485)
+.+++.++++.++++++|+ +......+........ ....++.++....... ..+...
T Consensus 81 ~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----------------~~~~~~ 141 (417)
T PF00501_consen 81 SEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQED---PSSSIIILDRDDLPKK----------------EALKSA 141 (417)
T ss_dssp SHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTST---TTEEEEEESHSSCTTC----------------HHHHHH
T ss_pred ccccccccccccceeEEEEeccccccccccchhhhcccc---cccccccccccccccc----------------cccccc
Confidence 9999999999999999997 2222222223322211 2334444443321000 000000
Q ss_pred CCCCCCCCCC-CCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH--HHhCCCCCCEEEEecchhhHhHH-HHHHHH
Q 036361 175 GDPKYKWVRP-RSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL--IDWAVPKQPVYLWTLPMFHANGW-GYTWGM 250 (485)
Q Consensus 175 ~~~~~~~~~~-~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~ 250 (485)
....... .+ ..++++++++|||||||.||+|.++|+++...+.... ..++++ |++++..|++|.+|+ ..++.+
T Consensus 142 ~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~ 218 (417)
T PF00501_consen 142 SLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAA 218 (417)
T ss_dssp HHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHH
T ss_pred ccccccc-cCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeecccccccccccccccc
Confidence 0000000 00 0457999999999999999999999999998877754 222333 599999999999999 678999
Q ss_pred HhhcceEeecccCC---HHHHHHHHHhcCceeeecchHHHHHHhCCCC------CCCCCCCceEEeccCCCChhhhhhhh
Q 036361 251 AAVGATNICLRRFD---ASAISDLIQKHNVTHMCGAPVVLNMISNSPD------FEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 251 l~~G~~~~~~~~~~---~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~------~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
+..|+++++.+... +..+++.++++++|+++++|++++.+++..+ ...++++|.++++|+++++++.++++
T Consensus 219 l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~ 298 (417)
T PF00501_consen 219 LFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEPLPPDLLRRLR 298 (417)
T ss_dssp HHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST-CHHHHHHHH
T ss_pred ccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccccccccccCChhhccccc
Confidence 99999999998644 4778999999999999999999999987321 24788899999999999999999999
Q ss_pred c-cCC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 S-MGF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 ~-~~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
+ ++. ++++.||+||++++++... .........++|.|.+++ +++|+|+++++++++| +.|||+++|
T Consensus 299 ~~~~~~~i~~~YG~tE~~~~~~~~~---------~~~~~~~~~~~G~~~~~~-~~~ivd~~~~~~~~~g--~~Gei~i~~ 366 (417)
T PF00501_consen 299 KAFGNAPIINLYGSTETGSIATIRP---------PEDDIEKPGSVGKPLPGV-EVKIVDPNTGEPLPPG--EPGEIVIRG 366 (417)
T ss_dssp HHHTTSEEEEEEEEGGGSSEEEEEE---------TTTHHSSTTSEBEESTTE-EEEEECTTTSSBESTT--SEEEEEEES
T ss_pred cccccccceecccccccceeeeccc---------cccccccccccccccccc-cccccccccccccccc--ccccccccC
Confidence 5 465 8999999999998887542 011122345789999998 9999998779999999 889999999
Q ss_pred CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeC
Q 036361 400 GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISG 450 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~ 450 (485)
++++.||+++++.+...|.++|||+|||+|++|+||.++++||.+|+||++
T Consensus 367 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 367 PNVFSGYYNDPELTAEAFIDDGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp TTSBSEETTBHHHHHHHEETTSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CccceeeeccccccccccccccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999866899999999999999999999999999974
No 92
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-58 Score=555.24 Aligned_cols=423 Identities=20% Similarity=0.218 Sum_probs=364.0
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
+.+++++|+++++++|+++|+.+.++++||+||.++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~~~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la~~~aG~~~v 589 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFGEETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLAILKAGGAYV 589 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeCCceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcCCEEe
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|++|..+.+++.++++.+++++++++....+.+. .. ....++.++.... + .
T Consensus 590 pld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~----~~----~~~~~~~~~~~~~------------------~---~ 640 (5163)
T PRK12316 590 PLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLP----LA----AGVQVLDLDRPAA------------------W---L 640 (5163)
T ss_pred ccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCC----cc----cCceEEEecCcch------------------h---h
Confidence 9999999999999999999999999875433211 00 1122333321110 0 0
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
... ..........++++++++|||||||.||||+++|+++.+.+.+....+++..++++++..|++|..++..++.++.
T Consensus 641 ~~~-~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~p~~fd~~~~~~~~~L~ 719 (5163)
T PRK12316 641 EGY-SEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAYGLGVGDTVLQKTPFSFDVSVWEFFWPLM 719 (5163)
T ss_pred ccC-CCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhcCCCCCCEEEeeCCeehHHHHHHHHHHHh
Confidence 000 0011112345779999999999999999999999999999999988999999999999999999999988999999
Q ss_pred hcceEeecc---cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc-CCee
Q 036361 253 VGATNICLR---RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFVV 327 (485)
Q Consensus 253 ~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~i 327 (485)
.|+++++.+ .+++..+++.++++++|++.++|++++.|.+......++++|.+++||+++++++.+++. .+ ++++
T Consensus 720 ~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l 799 (5163)
T PRK12316 720 SGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDEDVASCTSLRRIVCSGEALPADAQEQVFAKLPQAGL 799 (5163)
T ss_pred CCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhccccccCCCccEEEEeeccCCHHHHHHHHHhCCCCeE
Confidence 999999985 478999999999999999999999999998766556788999999999999999999986 33 7899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++..++...... ......++|+|.+++ +++|+|+ ++++++.| +.|||+|+|++++.||+
T Consensus 800 ~n~YG~TE~~~~~~~~~~~~---------~~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GYl 866 (5163)
T PRK12316 800 YNLYGPTEAAIDVTHWTCVE---------EGGDSVPIGRPIANL-ACYILDA-NLEPVPVG--VLGELYLAGRGLARGYH 866 (5163)
T ss_pred EeCcCcChheeeeeEEeccc---------ccCCCCCCccccCCC-EEEEECC-CCCCCCCC--CceEEEecccccChhhC
Confidence 99999999985544332111 011235789999998 9999996 78999999 88999999999999999
Q ss_pred CChhhhcccccC------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 408 KDKESTRRCISD------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 408 ~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
++++.+...|.. ++||+|||+|++++||.|+|+||.||+||++|++|+|.|||++|.+||+|.+|+|++.+
T Consensus 867 ~~~~~t~~~f~~~~~~~~~~~y~TGDl~~~~~dG~l~~~GR~d~~ik~~G~rI~~~EIE~~l~~~p~V~~a~V~~~~ 943 (5163)
T PRK12316 867 GRPGLTAERFVPSPFVAGERMYRTGDLARYRADGVIEYAGRIDHQVKLRGLRIELGEIEARLLEHPWVREAAVLAVD 943 (5163)
T ss_pred CChhhhhhhCCCCCCCCCCeeEecCccEEECCCCCEEeecccCCEEEEceEEcChHHHHHHHHhCCCcceEEEEEcC
Confidence 999999888743 35999999999999999999999999999999999999999999999999999999987
No 93
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.2e-58 Score=555.11 Aligned_cols=427 Identities=19% Similarity=0.205 Sum_probs=361.6
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..+++++|+++++.+|+++|+.+.++++||+||+++++++|+.|.+.|+++|++|+++++|++++++++|||+++|++++
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~~~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lAil~aGa~~v 2081 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFGDQHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLAVLKAGGAYV 2081 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcCCCeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhceEEe
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
||||..+.+++.++++.+++++++++.+....+... .....+.++... .+..
T Consensus 2082 pld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~--------~~~~~~~~~~~~------------------~~~~-- 2133 (5163)
T PRK12316 2082 PLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP--------AGVARLPLDRDA------------------EWAD-- 2133 (5163)
T ss_pred ecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc--------cccceEeccchh------------------hhhc--
Confidence 999999999999999999999999987654332100 011111111100 0000
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
...........++++++++|||||||.||||+++|+++.+.+.+....+.++++++++...|++|..++..++.++.
T Consensus 2134 ---~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~L~ 2210 (5163)
T PRK12316 2134 ---YPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAHEQWFHPLL 2210 (5163)
T ss_pred ---cCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHHHHHHHHHh
Confidence 00011112346789999999999999999999999999999998888899999999999999999988888999999
Q ss_pred hcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC-CCCCCCCceEEeccCCCChhhhhhhhc-c-CCee
Q 036361 253 VGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD-FEPLKTPVQILTAGAPPPAPVLSRTES-M-GFVV 327 (485)
Q Consensus 253 ~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~i 327 (485)
.|+++++.+ .+++..+++.++++++|++.++|++++.|.+... .....++|.+++||+++++++.++|.+ + +..+
T Consensus 2211 ~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l 2290 (5163)
T PRK12316 2211 NGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERDGRPPAVRVYCFGGEAVPAASLRLAWEALRPVYL 2290 (5163)
T ss_pred CCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcccCCcceeEEEEecccCCHHHHHHHHHhCCCcEE
Confidence 999997765 3689999999999999999999999999987542 223458999999999999999999984 4 6889
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++..++....... ........++|+|.++. +++|+|+ ++++++.| +.|||+|+|+++++||+
T Consensus 2291 ~n~YG~TE~~~~~~~~~~~~~------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~g--~~GEl~i~G~~v~~GY~ 2360 (5163)
T PRK12316 2291 FNGYGPTEAVVTPLLWKCRPQ------DPCGAAYVPIGRALGNR-RAYILDA-DLNLLAPG--MAGELYLGGEGLARGYL 2360 (5163)
T ss_pred EECccchhheeeeeeeecccc------cccCCCcCCcccccCCC-EEEEECC-CCCCCCCC--CeeEEEecchhhccccc
Confidence 999999999866554322111 00011124789999998 9999996 78899999 89999999999999999
Q ss_pred CChhhhcccccC-------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 408 KDKESTRRCISD-------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 408 ~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
++++.|...|.. ++||+|||+|++++||.|+++||.||+||++|++|++.|||.+|.++|+|.+++|++.++.
T Consensus 2361 ~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~~a~v~~~~~~ 2440 (5163)
T PRK12316 2361 NRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVREAVVVAQDGA 2440 (5163)
T ss_pred CChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccceEEEEEEecC
Confidence 999999998843 3599999999999999999999999999999999999999999999999999999998765
No 94
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=1.7e-57 Score=457.26 Aligned_cols=420 Identities=18% Similarity=0.226 Sum_probs=351.6
Q ss_pred chhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEec
Q 036361 15 TTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 94 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l 94 (485)
++.+.|.+.++.+|+++|+.+.+.++||+||.+++.++|+.|.+.|+++|++|+++++|+.++++++|||+++|++++|+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~v~~ 80 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQGQELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSIKSGHAYIPV 80 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCEEeCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccccc
Q 036361 95 NTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEE 174 (485)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (485)
++.++.+++..+++..++++++++.+...... ...++.+.... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~~~~~~~~~~---------------------~~~~~ 128 (502)
T TIGR01734 81 DTSIPSERIEMIIEAAGPELVIHTAELSIDAV-----------GTQIITLSALE---------------------QAETS 128 (502)
T ss_pred CCcChHHHHHHHHHhcCCCEEEeccccccccc-----------CCceEEchHhh---------------------hhhhh
Confidence 99999999999999999999999875432210 01122221100 00000
Q ss_pred CCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhc
Q 036361 175 GDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVG 254 (485)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G 254 (485)
.. ......+..+++.++++|||||||.||+|.++|+++..+..+....+....+++++...|++|..++..++.++..|
T Consensus 129 ~~-~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G 207 (502)
T TIGR01734 129 GG-PVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSVMDLYPCLASG 207 (502)
T ss_pred cC-CccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhHHHHHHHHHCC
Confidence 00 01111234567899999999999999999999999998888887778888999999999999999988889999999
Q ss_pred ceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc-CCee
Q 036361 255 ATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFVV 327 (485)
Q Consensus 255 ~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~i 327 (485)
+++++.++ .++..+++.+.++++|.+.++|.+++.+.... ....+++++.++++|+++++++.+.+. .+ ++.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~ 287 (502)
T TIGR01734 208 GTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCGEELPVKTAKALLERFPKATI 287 (502)
T ss_pred CEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcCCcCCHHHHHHHHHHCCCcEE
Confidence 99998874 58899999999999999999999998776543 445678999999999999999999988 45 8899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||+++.+.......... ......++|.+.+++ +++|+++ ++.++++| +.|||+++|++++.||+
T Consensus 288 ~~~yG~tE~~~~~~~~~~~~~~~------~~~~~~~vg~~~~~~-~~~i~~~-~~~~~~~g--~~Gel~v~g~~~~~gy~ 357 (502)
T TIGR01734 288 YNTYGPTEATVAVTSVKITQEIL------DQYPRLPIGFAKPDM-NLFIMDE-EGEPLPEG--EKGEIVIVGPSVSKGYL 357 (502)
T ss_pred EeCccCCcceEEEEEEEcccccc------ccCCccccccccCCC-EEEEECC-CCCCCCCC--CeeEEEEcccccccccc
Confidence 99999999976444322111100 011234689999998 9999996 68889988 88999999999999999
Q ss_pred CChhhhcccccC---CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 408 KDKESTRRCISD---NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 408 ~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
++++.+...|.+ .+||+|||+|+++++ +++++||.+|+|+++|++|+|.+||+.+.++|+|++++|++..
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~TGDlg~~~~~-~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~~~vv~~~ 430 (502)
T TIGR01734 358 NNPEKTAEAFFSHEGQPAYRTGDAGTITDG-QLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIESAVVVPKY 430 (502)
T ss_pred CCcccchHhheeCCCcEEEECCCEEEEECC-EEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccEEEEEEEE
Confidence 999888776532 359999999999966 9999999999999999999999999999999999999999965
No 95
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.7e-57 Score=456.54 Aligned_cols=425 Identities=23% Similarity=0.338 Sum_probs=340.1
Q ss_pred HHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC
Q 036361 21 ERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL 98 (485)
Q Consensus 21 ~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (485)
..+|+.+|+++|+.+. +.++||+||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|+++..
T Consensus 4 ~~~a~~~p~~~a~~~~~~~~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~~ 83 (501)
T PRK13390 4 GTHAQIAPDRPAVIVAETGEQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHHL 83 (501)
T ss_pred chhhhhCCCCcEEEecCCCeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccCC
Confidence 3567889999999874 58999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCC
Q 036361 99 DAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPK 178 (485)
Q Consensus 99 ~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (485)
+++++.++++.+++++++++....+...+... .....+.+.... .....+++.......
T Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~- 142 (501)
T PRK13390 84 TAPEADYIVGDSGARVLVASAALDGLAAKVGA------DLPLRLSFGGEI--------------DGFGSFEAALAGAGP- 142 (501)
T ss_pred CHHHHHHHHHhcCCcEEEEcchhhhHHHHhhh------ccceEEEecCcc--------------cccccHHHHhcccCC-
Confidence 99999999999999999998754433222211 011112221110 000111111111100
Q ss_pred CCCCCCCCCCCcEEEEecCCCCCCcccEEe--ccHHHHHHHH----HHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 179 YKWVRPRSEWDPMVLNYTSGTTSSPKGVVH--SHRGIFILTA----NALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 179 ~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~--s~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.....++.++++|||||||.||+|++ +|.++..... .....+.+..++++++.+|++|..++...+..+.
T Consensus 143 ----~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~~~~~~ 218 (501)
T PRK13390 143 ----RLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWCSMVHA 218 (501)
T ss_pred ----CCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHHHHHHh
Confidence 00122357999999999999999995 4555443221 1223456788999999999999998766555667
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhhc-cCCee
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTES-MGFVV 327 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~~~~i 327 (485)
.|+++++.+.+++..+++.|+++++|++.++|+++..+.+.. ....++++|.++.+|+++++++.+.+.+ ++..+
T Consensus 219 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~ 298 (501)
T PRK13390 219 LGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDADVRTRYDVSSLRAVIHAAAPCPVDVKHAMIDWLGPIV 298 (501)
T ss_pred cCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchhcccCChhhhheEEEcCCCCCHHHHHHHHHhcCCce
Confidence 899999888899999999999999999999999999988654 2245678999999999999999998884 68899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||+++++.... .......+++|.|.++ .++|+|+ +++++++| +.|||+++|++++.||+
T Consensus 299 ~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~~~~g--~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~ 363 (501)
T PRK13390 299 YEYYSSTEAHGMTFIDS----------PDWLAHPGSVGRSVLG--DLHICDD-DGNELPAG--RIGTVYFERDRLPFRYL 363 (501)
T ss_pred eeeecccccCceEEecc----------hhhccCCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecCCcccccc
Confidence 99999999986543221 1111234578999887 5899995 78899998 88999999999999999
Q ss_pred CChhhhcccccC--CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 408 KDKESTRRCISD--NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 408 ~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
++++.+...+.+ ++|++|||+|++|+||.+++.||.+++||++|.+|+|.+||++|.++|+|.+++|++.+++..||+
T Consensus 364 ~~~~~t~~~~~~~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~~~v~~~~~~~~~e~ 443 (501)
T PRK13390 364 NDPEKTAAAQHPAHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHDVAVIGVPDPEMGEQ 443 (501)
T ss_pred CChhhhHHhhccCCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeEEEEEeccCcccCce
Confidence 999988877643 579999999999999999999999999999999999999999999999999999999999887763
No 96
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.5e-57 Score=456.94 Aligned_cols=453 Identities=24% Similarity=0.356 Sum_probs=359.2
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
..++.++|+++++.+|+++|+.+.++++||.||.++++++|.+|.+ .|+++|++|+++++|++++++++|||+++|+++
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~~~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~lA~~~~G~~~ 101 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINMGEVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALFGILRAGMIV 101 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEECCccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEE
Confidence 3578999999999999999999999999999999999999999985 899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCcc------------CCCc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTT------------TSPT 159 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~------------~~~~ 159 (485)
+|++|..+.+++.++++.+++++++++.+..+.+.+..... ....++............. ....
T Consensus 102 v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (560)
T PRK08974 102 VNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFKT----PVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPK 177 (560)
T ss_pred eccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhhc----CcceEEEecccccccccccccccchhhhccccccc
Confidence 99999999999999999999999999887666555443321 1222222211100000000 0000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhC---CCCCCEEEEec
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWA---VPKQPVYLWTL 236 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 236 (485)
........+.+................++++++++|||||||.||+|.++|+++..+.......+. ...++.++..+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (560)
T PRK08974 178 YHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGPLLHPGKELVVTAL 257 (560)
T ss_pred ccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhccccCCCccEEEEeC
Confidence 000000111111111111111112245689999999999999999999999999877655443332 34467788999
Q ss_pred chhhHhHHHH-HHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCC
Q 036361 237 PMFHANGWGY-TWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 237 p~~~~~g~~~-~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l 312 (485)
|++|.+++.. .+..+..|+++++.. ..++..+++.++++++|.+.++|++++.+.+.. ....++++|.+++||+++
T Consensus 258 p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~lr~~~~gg~~~ 337 (560)
T PRK08974 258 PLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNEEFQELDFSSLKLSVGGGMAV 337 (560)
T ss_pred cHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCcccCCccceeEEEecCccC
Confidence 9999988755 566677888876654 568889999999999999999999999998765 234567899999999999
Q ss_pred Chhhhhhhhc-cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCce
Q 036361 313 PAPVLSRTES-MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVS 391 (485)
Q Consensus 313 ~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~ 391 (485)
++.+.+++++ +++++++.||+||++.+++.+.... .....++|.|.+++ .++|+++ ++.+++.| +
T Consensus 338 ~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~----------~~~~~~~G~~~~~~-~~~i~~~-~~~~~~~g--~ 403 (560)
T PRK08974 338 QQAVAERWVKLTGQYLLEGYGLTECSPLVSVNPYDL----------DYYSGSIGLPVPST-EIKLVDD-DGNEVPPG--E 403 (560)
T ss_pred CHHHHHHHHHHhCCcEEeeecccccCceeeccCCCC----------cccCCccccCcCCC-EEEEECC-CCCCCCCC--C
Confidence 9999999885 5899999999999987766543211 01235789999998 9999996 78899988 8
Q ss_pred ecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcce
Q 036361 392 LGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNE 471 (485)
Q Consensus 392 ~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~ 471 (485)
.|||+++|+.++.||+++++.+...|. ++||+|||+++++++|.++++||.+|+|+++|.++++.+||++|.++|+|.+
T Consensus 404 ~Gel~v~g~~~~~gy~~~~~~~~~~~~-~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~ 482 (560)
T PRK08974 404 PGELWVKGPQVMLGYWQRPEATDEVIK-DGWLATGDIAVMDEEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMLHPKVLE 482 (560)
T ss_pred ceEEEEecCCcchhhcCChhhhhhhhh-cCCcccCCEEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCCCeeE
Confidence 899999999999999999988887775 8999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCCCC
Q 036361 472 AAVVARPDKFWGE 484 (485)
Q Consensus 472 ~~v~~~~~~~~g~ 484 (485)
++|++.+++..|+
T Consensus 483 ~~v~~~~~~~~g~ 495 (560)
T PRK08974 483 VAAVGVPSEVSGE 495 (560)
T ss_pred EEEEeeecCCcce
Confidence 9999999887775
No 97
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=6.8e-58 Score=545.38 Aligned_cols=431 Identities=18% Similarity=0.180 Sum_probs=365.5
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...+++++|+++++++|+++|+.+.+.++||+||+++++++|+.|.+.|+++|++|+|++++++++++++||++++|+.+
T Consensus 3718 ~~~~~~~~~~~~~~~~p~~~Av~~~~~~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~lavlkaG~a~ 3797 (4334)
T PRK05691 3718 LEQSYVRLFEAQVAAHPQRIAASCLDQQWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVGSFKAGAGY 3797 (4334)
T ss_pred cccCHHHHHHHHHHhCCCceEEEcCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHhhCcEE
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+||||..+.+++.++++.+++++++++....+............ ..+.++..++..
T Consensus 3798 vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----------------------- 3853 (4334)
T PRK05691 3798 LPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCA-NRPRLLVWEEVQ----------------------- 3853 (4334)
T ss_pred eCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccc-cccceeeecccc-----------------------
Confidence 99999999999999999999999999987665444333222210 111222222110
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMA 251 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 251 (485)
..............+++++|++|||||||.||||+++|+++.+.+.+....+.+++.++++...++.|..++..++.++
T Consensus 3854 -~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~~~~~~~l 3932 (4334)
T PRK05691 3854 -AGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISVWQFLAAP 3932 (4334)
T ss_pred -cccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHHHHHHHHH
Confidence 0000011111234578999999999999999999999999999999888889999999999999999999999999999
Q ss_pred hhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhcc--CCe
Q 036361 252 AVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESM--GFV 326 (485)
Q Consensus 252 ~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~--~~~ 326 (485)
+.|+++++.+. .++..+++.++++++|++.++|++++.++.. ....++++|.+++|||++++++.++|.+. +++
T Consensus 3933 ~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~-~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~ 4011 (4334)
T PRK05691 3933 LFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAE-DRQALDGLRWMLPTGEAMPPELARQWLQRYPQIG 4011 (4334)
T ss_pred hCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhh-ccccCCCceEEEecCCcCCHHHHHHHHHhCCCCe
Confidence 99999999863 5799999999999999999999999988754 33457899999999999999999999743 789
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++..++....... ........+|+|.++. .+.|+|. .+++++.| ..|||+|+|+++++||
T Consensus 4012 l~n~YG~TE~t~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~~~v~d~-~~~~~p~g--~~GEL~i~G~~v~~GY 4080 (4334)
T PRK05691 4012 LVNAYGPAECSDDVAFFRVDLA-------STRGSYLPIGSPTDNN-RLYLLDE-ALELVPLG--AVGELCVAGTGVGRGY 4080 (4334)
T ss_pred EEeCccCccceeEEEEEEcccc-------cccCCcCCCCCccCCC-EEEEECC-CCCCCCCC--CceEEEEecccccccc
Confidence 9999999999876654432111 0011124689999998 9999995 78999999 8899999999999999
Q ss_pred cCChhhhcccccC-------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 407 FKDKESTRRCISD-------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 407 ~~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
+++++.|...|.+ ++||+|||+|++++||.|+|+||.|++||++|.+|.+.|||+.|.++|+|.+|+|+...+
T Consensus 4081 ~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~~v~~a~v~~~~~ 4160 (4334)
T PRK05691 4081 VGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQAEVREAAVAVQEG 4160 (4334)
T ss_pred cCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCCCccEEEEEEecC
Confidence 9999999998843 459999999999999999999999999999999999999999999999999998876543
No 98
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.7e-57 Score=450.12 Aligned_cols=401 Identities=26% Similarity=0.374 Sum_probs=339.7
Q ss_pred HhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHH
Q 036361 24 ATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNL 103 (485)
Q Consensus 24 a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (485)
++..++++|+.+.++++||+||.++++++|..|+ ++|+|+++++|++++++++|||+++|++++|+++..+.+++
T Consensus 10 ~~~~~~~~a~~~~~~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l 84 (471)
T PRK07787 10 AAAADIADAVRIGGRVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPDSGVAER 84 (471)
T ss_pred hcccCCceEEEeCCcEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCCCChHHH
Confidence 4456889999999999999999999999999996 57999999999999999999999999999999999999999
Q ss_pred HHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCC
Q 036361 104 SVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVR 183 (485)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (485)
..+++.+++++++++.+... . ..+... +.... ..+. ...
T Consensus 85 ~~~l~~~~~~~il~~~~~~~---------~---~~~~~~-~~~~~-----------------~~~~-----------~~~ 123 (471)
T PRK07787 85 RHILADSGAQAWLGPAPDDP---------A---GLPHVP-VRLHA-----------------RSWH-----------RYP 123 (471)
T ss_pred HHHHHhcCCCEEEecCCccc---------c---ccccee-eeccc-----------------cccc-----------cCC
Confidence 99999999999999763110 0 011000 00000 0000 001
Q ss_pred CCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHhhcceEeeccc
Q 036361 184 PRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICLRR 262 (485)
Q Consensus 184 ~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~ 262 (485)
...++++++++|||||||.||+|.++|+++..++......+.+.+++++++.+|++|..|+.. ++.++..|+++++.+.
T Consensus 124 ~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~ 203 (471)
T PRK07787 124 EPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR 203 (471)
T ss_pred CCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC
Confidence 134679999999999999999999999999998888888888899999999999999998875 7889999999999988
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccc
Q 036361 263 FDASAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLV 340 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~ 340 (485)
+++..+++.++ +++|++.++|+++..+.+.. ....++++|.+++||+++++++.+++. .++.++++.||+||++...
T Consensus 204 ~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~~~~~l~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 282 (471)
T PRK07787 204 PTPEAYAQALS-EGGTLYFGVPTVWSRIAADPEAARALRGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITL 282 (471)
T ss_pred CCHHHHHHHHh-hCceEEEcchHHHHHHHhCccccccccceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcce
Confidence 99999999999 99999999999999998654 234678899999999999999999988 4689999999999998654
Q ss_pred cccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCC
Q 036361 341 VSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDN 420 (485)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 420 (485)
...... .....++|.|.++. .++|+|+ ++.+++..+...|||+++|++++.||+++++.+...|..+
T Consensus 283 ~~~~~~-----------~~~~~~vG~~~~g~-~~~i~d~-~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~ 349 (471)
T PRK07787 283 STRADG-----------ERRPGWVGLPLAGV-ETRLVDE-DGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTAD 349 (471)
T ss_pred ecCCCC-----------cccCCcccccCCCc-EEEEECC-CCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCC
Confidence 332110 11235789999998 9999996 5777774322479999999999999999999999988878
Q ss_pred CeeecCceEEEecCceEEEEccC-CceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 421 GWFYTGDIAVMHVDGYVEIKDRS-KDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 421 ~~~~TGD~~~~~~~g~l~~~gR~-~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|||+|++++||+++++||. +++++.+|.++++.+||+.|..++.|++++|++.+++..|+
T Consensus 350 ~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~~~v~~~~~~~~~~ 414 (471)
T PRK07787 350 GWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVREAAVVGVPDDDLGQ 414 (471)
T ss_pred CceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcceEEEEcccccccCe
Confidence 99999999999999999999996 89999999999999999999999999999999999887665
No 99
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-58 Score=422.18 Aligned_cols=458 Identities=22% Similarity=0.263 Sum_probs=380.3
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEeCC-----------------------eeeeHHHHHHHHHHHHHHHHHcCCCCC
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVYNN-----------------------TTYTWSETHRRCLQVASSLSSVGIQRG 64 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~-----------------------~~~Ty~~l~~~~~~lA~~L~~~gi~~g 64 (485)
...+...|+++++++..+.+.++.++-..+ ..+||.|+.+++.++|++|.+.|++++
T Consensus 35 ~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~ 114 (678)
T KOG1180|consen 35 PPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPK 114 (678)
T ss_pred CCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCC
Confidence 344566799999999999999999996532 569999999999999999999999987
Q ss_pred CE-EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEE
Q 036361 65 HV-VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVL 143 (485)
Q Consensus 65 d~-V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~ 143 (485)
++ ++++++.+.+|+.+++||++.+.++|.+...+..+-+.+.|++++++.+|++.+.+..+........ ..+.+|.
T Consensus 115 e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hsl~Et~~~~i~T~~~LL~kl~~~l~~~~---~vk~II~ 191 (678)
T KOG1180|consen 115 ETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHSLNETESTAIFTDSELLPKLKAPLKQAK---TVKHIIY 191 (678)
T ss_pred CCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhhhccccceEEEeCHHHHHHHHHHHhccC---ceeEEEE
Confidence 76 9999999999999999999999999999999999999999999999999999999888777777766 6788888
Q ss_pred ecCCcccccCccCCCcc-ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH
Q 036361 144 VDDDAAASSTTTTSPTV-TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI 222 (485)
Q Consensus 144 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~ 222 (485)
++............... ....+.+|++++..+.....+..+..++|+|+|+|||||||.||||+++|.|+++.+.....
T Consensus 192 ~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~ 271 (678)
T KOG1180|consen 192 FDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKPSDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGE 271 (678)
T ss_pred ecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCCCceEEEEEcCCCCCCCceEEEecccHHhhhhhhcc
Confidence 88543222222222111 12345678888888877755555558899999999999999999999999999998877776
Q ss_pred Hh-CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHH--------HHHHHHHhcCceeeecchHHHHHHhCC
Q 036361 223 DW-AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDAS--------AISDLIQKHNVTHMCGAPVVLNMISNS 293 (485)
Q Consensus 223 ~~-~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~--------~~~~~i~~~~~t~~~~~p~~~~~l~~~ 293 (485)
.. .+++.|+++..+||.|.+-+..=+.+++.|+++-..+..+.. .--..+...|||.+.++|..|+++.+.
T Consensus 272 ~v~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKg 351 (678)
T KOG1180|consen 272 NVPELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSPLTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKG 351 (678)
T ss_pred cCcccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCcceecccchhhccCCcCccccccchhhhhhHHHHHHHHHH
Confidence 65 689999999999999999998888999999998876542211 122345678999999999999888754
Q ss_pred C--------------------------C-C-----------------CCCCCCceEEeccCCCChhhhhhhh-ccCCeee
Q 036361 294 P--------------------------D-F-----------------EPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVC 328 (485)
Q Consensus 294 ~--------------------------~-~-----------------~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~ 328 (485)
. + . ..-.++|.+++||+++++++.+.+- -+.+++.
T Consensus 352 Vl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~ 431 (678)
T KOG1180|consen 352 VLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVL 431 (678)
T ss_pred HHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhcccccc
Confidence 2 0 0 0113789999999999999998888 5577999
Q ss_pred eccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccC
Q 036361 329 HGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFK 408 (485)
Q Consensus 329 ~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~ 408 (485)
++||.||+++..+...+. ....+.+|.|++.. +++++|-+++.....+....|||+++|++++.||++
T Consensus 432 qGYGLTEtca~~tv~e~~-----------d~~~g~vG~pl~c~-eiKLvdw~EgGY~~~~~PPrGEI~i~G~~vt~gY~k 499 (678)
T KOG1180|consen 432 QGYGLTETCAAATVLEPE-----------DFSTGRVGAPLPCC-EIKLVDWEEGGYFAKNKPPRGEILIGGPNVTMGYYK 499 (678)
T ss_pred ccccccchhcccEecChh-----------hcccccccCCccce-EEEEEEhhhcCccCCCCCCCceEEecCCccChhhhC
Confidence 999999998776654321 11235889999998 999999766655554422369999999999999999
Q ss_pred ChhhhcccccC-CC--eeecCceEEEecCceEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 409 DKESTRRCISD-NG--WFYTGDIAVMHVDGYVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 409 ~~~~~~~~~~~-~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
+++.|...|.. +| ||+|||+|++++||.|.+.+|.+|.+| .+|+.|++..||++++..|-|...+|.+...+
T Consensus 500 n~ekT~e~ft~~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLVKlq~GEYIsL~KvEa~l~s~p~V~NICvyAd~~~ 575 (678)
T KOG1180|consen 500 NEEKTKEDFTVEDGQRWFRTGDIGEFHPDGCLKIIDRKKDLVKLQNGEYISLGKVEAALRSSPYVDNICVYADSNK 575 (678)
T ss_pred ChhhhhhhceecCCcEEEeccccceecCCCcEEEeechhhhhhhcccceeehHHHHHHHhcCcchhheEEeccccc
Confidence 99999999987 88 999999999999999999999999999 89999999999999999999999999987654
No 100
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-56 Score=450.76 Aligned_cols=430 Identities=24% Similarity=0.338 Sum_probs=350.8
Q ss_pred HHHHHhhcCCCcEEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC
Q 036361 20 LERAATAYSDCPSIVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR 97 (485)
Q Consensus 20 l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~ 97 (485)
.+..++.+|+++|+++ .++.+||.||.++++++|+.|.+.|+++|++|+++++|+++++++++||+++|++++++++.
T Consensus 3 ~~~~a~~~p~~~a~~~~~~~~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 3 PGIHAQTTPDKPAVIMASTGEVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred hhhhHhhCCCceEEEecCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 3567889999999987 46789999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCC
Q 036361 98 LDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDP 177 (485)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (485)
.+.+++.++++.+++++++++......+.+...... .....+...+.... .....+.+.......
T Consensus 83 ~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~ 147 (511)
T PRK13391 83 LTPAEAAYIVDDSGARALITSAAKLDVARALLKQCP---GVRHRLVLDGDGEL------------EGFVGYAEAVAGLPA 147 (511)
T ss_pred cCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhcCC---CceEEEEecCCCCC------------cccccHHHHhcCCCC
Confidence 999999999999999999999877666555544332 22333444322110 011112221111111
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCcccEEec--cHHHHHH---HHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 178 KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHS--HRGIFIL---TANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 178 ~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s--~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
......++.++++|||||||.||+|.++ |.+.... .......+.+..++++++..|++|.+++...+.++.
T Consensus 148 ----~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~ 223 (511)
T PRK13391 148 ----TPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQRAVMLVIR 223 (511)
T ss_pred ----CCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHHHHHHHHH
Confidence 1112344678999999999999999964 5554322 233344566788999999999999999888888899
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhhc-cCCee
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTES-MGFVV 327 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~~~~i 327 (485)
.|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....++++|.+++||+++++++.+.+++ ++..+
T Consensus 224 ~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~g~~v 303 (511)
T PRK13391 224 LGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVRDKYDLSSLEVAIHAAAPCPPQVKEQMIDWWGPII 303 (511)
T ss_pred cCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhcccCCccceeEEEEccCCCCHHHHHHHHHHcCCce
Confidence 999999998899999999999999999999999998887654 2335789999999999999999999884 58899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++.++..... ......+++|.+.++ .++++|+ ++++++.| +.|||+++|+ ++.||+
T Consensus 304 ~~~YG~tE~~~~~~~~~~----------~~~~~~~~vG~~~~g--~~~i~d~-~~~~~~~g--~~Gel~~~g~-~~~gy~ 367 (511)
T PRK13391 304 HEYYAATEGLGFTACDSE----------EWLAHPGTVGRAMFG--DLHILDD-DGAELPPG--EPGTIWFEGG-RPFEYL 367 (511)
T ss_pred eeeeccccccceEEecCc----------cccccCCCcCCcccc--eEEEECC-CCCCCCCC--CceEEEEecC-cceEEc
Confidence 999999999876543211 011224588998888 5889995 78888888 7899999999 889999
Q ss_pred CChhhhcccccCC-CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 408 KDKESTRRCISDN-GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 408 ~~~~~~~~~~~~~-~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++++.+...+..+ +||+|||+|++++||.+++.||.+|+++++|.++++.+||+++.+||.|.+++|++.+++..|+
T Consensus 368 ~~~~~~~~~~~~~~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~~~v~~~~~~~~g~ 445 (511)
T PRK13391 368 NDPAKTAEARHPDGTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVADAAVFGVPNEDLGE 445 (511)
T ss_pred CChhHhHHhhccCCCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcceEEEEecCCcccCc
Confidence 9999888877644 8999999999999999999999999999999999999999999999999999999999988776
No 101
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=1.5e-56 Score=490.67 Aligned_cols=439 Identities=22% Similarity=0.257 Sum_probs=352.8
Q ss_pred CCcchhHHHHHHHhhcC-CCcEEEe-CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 12 TPLTTLGFLERAATAYS-DCPSIVY-NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p-~~~a~~~-~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...++.+.+.++++++| ++.|+.+ .++++||+||+++++++|+.|.+ |+++||+|+++++|+++++++++||+++|+
T Consensus 629 ~~~~~~~~l~~~~~~~~~~~~ai~~~~~~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~~la~~~~G~ 707 (1140)
T PRK06814 629 YDRTLFEALIEAAKIHGFKKLAVEDPVNGPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVTFFALQSAGR 707 (1140)
T ss_pred ccCCHHHHHHHHHHHcCCCCeEeECCCCCccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHHHHHHHHCCC
Confidence 35678888888888887 5577665 35899999999999999999976 999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHH--HHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLV--LEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDT 167 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (485)
+++|+|+..+.+++.+++++++++++|++++..+.. .+...... ....++.+++..... .....
T Consensus 708 v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~-----------~~~~~ 773 (1140)
T PRK06814 708 VPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALE---FGIRIIYLEDVRAQI-----------GLADK 773 (1140)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhc---cCceEEEehHhhccC-----------ChHHH
Confidence 999999999999999999999999999987544321 11111111 223444444321100 00000
Q ss_pred cccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH-H
Q 036361 168 YEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG-Y 246 (485)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~-~ 246 (485)
+........+.. ...+..++|+++++|||||||.||+|.++|+++..++......+..+++|++++.+|++|.+++. .
T Consensus 774 ~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 774 IKGLLAGRFPLV-YFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHhhccCCcc-ccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 111111111111 01134678999999999999999999999999998888888888899999999999999999984 4
Q ss_pred HHHHHhhcceEeeccc-CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-ccC
Q 036361 247 TWGMAAVGATNICLRR-FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SMG 324 (485)
Q Consensus 247 ~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~ 324 (485)
++.++..|+++++.+. .+...+.+.++++++|++..+|++++.+.+.....+++++|.+++||+++++++.+.+. .++
T Consensus 853 ~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg~~l~~~~~~~~~~~~~ 932 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGAEKVKEETRQTWMEKFG 932 (1140)
T ss_pred HHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcCCcCCHHHHHHHHHHhC
Confidence 7788899999988764 56778899999999999999999999998765556788999999999999999999988 569
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV 404 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~ 404 (485)
+++++.||+||++..+..+... .....++|+|.+++ ++++.+.+ + .+ +.|||+++|++++.
T Consensus 933 ~~~~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~g~-~~~~~~~~-~----~~--~~Gel~v~g~~~~~ 993 (1140)
T PRK06814 933 IRILEGYGVTETAPVIALNTPM-----------HNKAGTVGRLLPGI-EYRLEPVP-G----ID--EGGRLFVRGPNVML 993 (1140)
T ss_pred CcEEeccccccccceEEecCCC-----------CCCCCcCCccCCCC-eEEEeecC-C----CC--CceEEEEeCCCcch
Confidence 9999999999998765543211 01235889999998 99997742 2 23 66999999999999
Q ss_pred cccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 405 GYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 405 gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||+++++........+|||+|||+|++|+||.+++.||.||+||++|++|+|.|||+++.+++.|.+++|++.+++..||
T Consensus 994 gY~~~~~~~~~~~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~~~~~v~~~~vv~~~~~~~g~ 1073 (1140)
T PRK06814 994 GYLRAENPGVLEPPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAAELWPDALHAAVSIPDARKGE 1073 (1140)
T ss_pred hhcCCCCCCccccCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHHhcCCcccEEEEEcccCCCCc
Confidence 99987653322222488999999999999999999999999999999999999999999999999999999999998887
Q ss_pred C
Q 036361 485 T 485 (485)
Q Consensus 485 ~ 485 (485)
+
T Consensus 1074 ~ 1074 (1140)
T PRK06814 1074 R 1074 (1140)
T ss_pred e
Confidence 3
No 102
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3e-57 Score=539.91 Aligned_cols=425 Identities=19% Similarity=0.224 Sum_probs=363.4
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
....+++++|+++++.+|+++|+.+.+.++||+||.++++++|+.|++.|+++|++|++++++++++++++|||+++|++
T Consensus 1128 ~~~~~l~~~~~~~a~~~p~~~Al~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~s~~~iv~~lailkaG~~ 1207 (4334)
T PRK05691 1128 PAQAWLPELLNEQARQTPERIALVWDGGSLDYAELHAQANRLAHYLRDKGVGPDVCVAIAAERSPQLLVGLLAILKAGGA 1207 (4334)
T ss_pred CccCCHHHHHHHHHHhCCCCeEEEECCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCE
Confidence 44568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|++|..+.+++.++++.+++++++++......+... .....+.++.... ..+
T Consensus 1208 ~vpld~~~p~~rl~~il~~~~~~~vi~~~~~~~~~~~~--------~~~~~~~~~~~~~----------------~~~-- 1261 (4334)
T PRK05691 1208 YVPLDPDYPAERLAYMLADSGVELLLTQSHLLERLPQA--------EGVSAIALDSLHL----------------DSW-- 1261 (4334)
T ss_pred EEecCcCChHHHHHHHHHhcCCCEEEecchhhhhcccc--------cCceEEeeccccc----------------ccc--
Confidence 99999999999999999999999999987654332110 0011111111100 000
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGM 250 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 250 (485)
..........++++++++|||||||.||||+++|+++.+.+.+....+++.+++++++..|++|..++..++.+
T Consensus 1262 ------~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~s~~~~~~~ 1335 (4334)
T PRK05691 1262 ------PSQAPGLHLHGDNLAYVIYTSGSTGQPKGVGNTHAALAERLQWMQATYALDDSDVLMQKAPISFDVSVWECFWP 1335 (4334)
T ss_pred ------CCCCCCCCCCCCCeEEEEEcCCCCCCCceeEeecHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHH
Confidence 00011112456799999999999999999999999999998888888999999999999999999998889999
Q ss_pred HhhcceEeecc---cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc-CC
Q 036361 251 AAVGATNICLR---RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GF 325 (485)
Q Consensus 251 l~~G~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~ 325 (485)
+..|+++++.+ .+++..+++.++++++|++.++|++++.+.+......++++|.+++||+++++++.+++. .+ ++
T Consensus 1336 L~~G~~l~i~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~ 1415 (4334)
T PRK05691 1336 LITGCRLVLAGPGEHRDPQRIAELVQQYGVTTLHFVPPLLQLFIDEPLAAACTSLRRLFSGGEALPAELRNRVLQRLPQV 1415 (4334)
T ss_pred HhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEECcHHHHHHHHhCcccccCCcccEEEEeecCCCHHHHHHHHHhCCCc
Confidence 99999999985 368999999999999999999999999998765556788999999999999999999988 44 78
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 405 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~g 405 (485)
++++.||+||++..++....... .....++|+|.+++ .++|+|+ .+++++.| ..|||+|+|+++++|
T Consensus 1416 ~l~n~YG~TE~~~~~~~~~~~~~---------~~~~~~iG~p~~~~-~~~i~d~-~~~~vp~G--~~GEL~i~G~~v~~G 1482 (4334)
T PRK05691 1416 QLHNRYGPTETAINVTHWQCQAE---------DGERSPIGRPLGNV-LCRVLDA-ELNLLPPG--VAGELCIGGAGLARG 1482 (4334)
T ss_pred EEEeCCCcChheeeeeeeecccc---------cCCCCcccceeCCC-EEEEECC-CCCCCCCC--CceEEEecCcccchh
Confidence 99999999999866554321110 11235789999998 9999996 78999999 889999999999999
Q ss_pred ccCChhhhcccccC-------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 406 YFKDKESTRRCISD-------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 406 y~~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|+++++.+...|.. .+||+|||+|++++||.++|+||.|++||++|++|.|.|||.+|.++|+|.+|+|++.+
T Consensus 1483 Yl~~p~~t~~~f~~~p~~~~~~r~yrTGDl~~~~~dG~l~~~GR~d~qiki~G~rie~~eIE~~l~~~~~V~~a~v~~~~ 1562 (4334)
T PRK05691 1483 YLGRPALTAERFVPDPLGEDGARLYRTGDRARWNADGALEYLGRLDQQVKLRGFRVEPEEIQARLLAQPGVAQAAVLVRE 1562 (4334)
T ss_pred hcCCccccHhhCCCCCCCCCCceEEEccceEEECCCCCEEEecccCcEEEECCEEcCHHHHHHHHHhCCCcceEEEEEee
Confidence 99999999988843 24999999999999999999999999999999999999999999999999999999776
Q ss_pred CC
Q 036361 479 DK 480 (485)
Q Consensus 479 ~~ 480 (485)
+.
T Consensus 1563 ~~ 1564 (4334)
T PRK05691 1563 GA 1564 (4334)
T ss_pred CC
Confidence 54
No 103
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=3e-56 Score=448.46 Aligned_cols=427 Identities=19% Similarity=0.249 Sum_probs=356.7
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
+++.++|+++++.+|+++|+...++++||.||.++++++|..|.+.|+++|++|+++++|+.++++++|||+++|++++|
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~~~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~~~~G~~~~~ 81 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYLGEKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGAVKAGHAYIP 81 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeCCcEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEec
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++..+++..++++++++.+.... . .....+..++ +.....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~---------------------~~~~~~ 129 (503)
T PRK04813 82 VDVSSPAERIEMIIEVAKPSLIIATEELPLE--------I---LGIPVITLDE---------------------LKDIFA 129 (503)
T ss_pred CCCCChHHHHHHHHHhcCCCEEEeccccccc--------c---cCCcEEehHH---------------------hhhhhh
Confidence 9999999999999999999999998754100 0 0111111111 000000
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAV 253 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 253 (485)
. ...........++++++++|||||||.||+|.++|+++..+..+....+.+..+++++...|++|..++..++.++..
T Consensus 130 ~-~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~ 208 (503)
T PRK04813 130 T-GNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSVMDLYPTLAS 208 (503)
T ss_pred c-cccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhHHHHHHHHhc
Confidence 0 001111123456789999999999999999999999999888888888888999999999999999988888899999
Q ss_pred cceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc-CCe
Q 036361 254 GATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFV 326 (485)
Q Consensus 254 G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~ 326 (485)
|+++++.+. .++..+++.++++++|.+..+|++++.+.... ....++++|.++++|+++++.+.+.+. .+ ++.
T Consensus 209 g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~~~~~~~l~~i~~~G~~l~~~~~~~~~~~~~~~~ 288 (503)
T PRK04813 209 GGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFNEEHLPNLTHFLFCGEELPHKTAKKLLERFPSAT 288 (503)
T ss_pred CCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccCcccCCCceEEEEecCcCCHHHHHHHHHHCCCce
Confidence 999998874 58899999999999999999999998876443 445678999999999999999999998 55 789
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++..++.....+.. .......++|.+.++. +++|+++ ++.+++.| +.|||+++|++++.||
T Consensus 289 ~~~~yG~tE~~~~~~~~~~~~~~------~~~~~~~~~g~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy 358 (503)
T PRK04813 289 IYNTYGPTEATVAVTSIEITDEM------LDQYKRLPIGYAKPDS-PLLIIDE-EGTKLPDG--EQGEIVISGPSVSKGY 358 (503)
T ss_pred EEeCcccchheeEEEEEEecccc------cccCCCCcccccCCCC-EEEEECC-CCCCCCCC--CceEEEEecccccccc
Confidence 99999999997655443221110 0112234689999998 9999995 78889888 7899999999999999
Q ss_pred cCChhhhcccccC-C--CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 407 FKDKESTRRCISD-N--GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 407 ~~~~~~~~~~~~~-~--~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
+++++.+...|.. + +||+|||+|++ ++|.+++.||.+|+|+++|+++++.+||+.+.++|+|.+++|++.+++..+
T Consensus 359 ~~~~~~~~~~~~~~~g~~~~~tGD~~~~-~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~ 437 (503)
T PRK04813 359 LNNPEKTAEAFFTFDGQPAYHTGDAGYL-EDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVESAVVVPYNKDHKV 437 (503)
T ss_pred CCChhHhHHhhccCCCceeEECCceEEe-eCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcceEEEEEeeCCCCc
Confidence 9999988877642 3 49999999999 899999999999999999999999999999999999999999998776544
Q ss_pred C
Q 036361 484 E 484 (485)
Q Consensus 484 ~ 484 (485)
+
T Consensus 438 ~ 438 (503)
T PRK04813 438 Q 438 (503)
T ss_pred c
Confidence 3
No 104
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-56 Score=458.18 Aligned_cols=437 Identities=22% Similarity=0.304 Sum_probs=333.1
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhh
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNN---------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGV 84 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~ 84 (485)
+++.++|++++..+|+++|+.+.+ +++||.||.++++++|++|++.| ++||+|+++++|++++++++|||
T Consensus 1 ~s~~~~l~~~a~~~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~lA~ 79 (578)
T PRK05850 1 SSVPSLLRERASLQPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFLGA 79 (578)
T ss_pred CcHHHHHHHHHhcCCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHHHH
Confidence 468899999999999999998632 68999999999999999999999 68999999999999999999999
Q ss_pred hccCceEEecCC---CCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 85 PMSGAILNNINT---RLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 85 ~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
+++|++++|+++ ..+.+++.++++.+++++++++.+..+.+.+........ ....++.++...
T Consensus 80 ~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------------- 145 (578)
T PRK05850 80 LQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQ-SAPPVIEVDLLD------------- 145 (578)
T ss_pred HHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccc-cccceEeecccc-------------
Confidence 999999999997 457889999999999999999987766554432211100 111222221100
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh-C-----CCCCCEEEEe
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW-A-----VPKQPVYLWT 235 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~-~-----~~~~~~~~~~ 235 (485)
+ .... .. ......++++++++|||||||.||+|.++|+++..++......+ . ...++++++.
T Consensus 146 ------~---~~~~--~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 213 (578)
T PRK05850 146 ------L---DSPR--GS-DARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSW 213 (578)
T ss_pred ------c---ccCC--cc-ccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEE
Confidence 0 0000 00 01123567999999999999999999999999988776655432 2 3457899999
Q ss_pred cchhhHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC-----CCCCCCCCceE
Q 036361 236 LPMFHANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP-----DFEPLKTPVQI 305 (485)
Q Consensus 236 ~p~~~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-----~~~~l~~lr~i 305 (485)
+|++|..|+.. ++.+++.|+++++.+. .++..+++.+.+++++....++..+..+.... ....++++|.+
T Consensus 214 ~pl~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~lr~~ 293 (578)
T PRK05850 214 LPFYHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDDDMAGLDLGGVLGI 293 (578)
T ss_pred CCCCCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEeCCcHHHHHHHHhcchhhhcCcchhhheeE
Confidence 99999999865 7888999999998864 27899999999999986644444444443321 12356789999
Q ss_pred EeccCCCChhhhhhhhc-c---C---CeeeeccCCccccccccccCCCCCCC--CCChHHHh------------hhhhcc
Q 036361 306 LTAGAPPPAPVLSRTES-M---G---FVVCHGYGLTETAGLVVSCSWKPEWD--KLPLEERA------------RLKARQ 364 (485)
Q Consensus 306 ~~~g~~l~~~~~~~~~~-~---~---~~i~~~Yg~tE~~~~~~~~~~~~~~~--~~~~~~~~------------~~~~~~ 364 (485)
++||+++++.+.+++.+ + + ..+++.||+||++..+.......... ........ ....+.
T Consensus 294 ~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 373 (578)
T PRK05850 294 ISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSY 373 (578)
T ss_pred EECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEec
Confidence 99999999999988873 3 2 36899999999875544322111000 00000000 001133
Q ss_pred CccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhccccc-----------CCCeeecCceEEEec
Q 036361 365 GVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS-----------DNGWFYTGDIAVMHV 433 (485)
Q Consensus 365 G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TGD~~~~~~ 433 (485)
|.|. +. +++++|++++.++++| +.|||+++|++++.||+++++.+...|. .++||+|||+|+++
T Consensus 374 g~p~-~~-~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~- 448 (578)
T PRK05850 374 GSPR-SP-TVRIVDPDTCIECPAG--TVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFIS- 448 (578)
T ss_pred cCCC-CC-EEEEEcCCCCcCCCCC--CEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEE-
Confidence 4432 34 8999998778899998 8899999999999999999999988774 25799999999998
Q ss_pred CceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 434 DGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 434 ~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||+++++||.+|+||++|++|+|.+||++|.+|+.+ +++|++.+++ .|+
T Consensus 449 ~G~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~~-~~~v~~v~~~-~~~ 497 (578)
T PRK05850 449 EGELFIVGRIKDLLIVDGRNHYPDDIEATIQEITGG-RVAAISVPDD-GTE 497 (578)
T ss_pred CCEEEEEcccccEEEECCeecCHHHHHHHHHHhcCC-cEEEEEecCC-Cce
Confidence 999999999999999999999999999999999985 4788888876 443
No 105
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-55 Score=446.52 Aligned_cols=441 Identities=25% Similarity=0.315 Sum_probs=351.3
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
.++.++|+++++++|+++|+.+.++.+||.||.++++++|+.|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~~~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~~~~G~~~v~ 82 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCGDRRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGAFKARAVPVN 82 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEECCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCeEEEe
Confidence 37999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++..+.+++.++++.+++++++++....+.+.+...... ....++.+++....... .+...+++...
T Consensus 83 l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~ 150 (533)
T PRK07798 83 VNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLPRLP---KLRTLVVVEDGSGNDLL---------PGAVDYEDALA 150 (533)
T ss_pred cCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhccCC---CccEEEEecCCcccccC---------CccccHHHHHh
Confidence 9999999999999999999999999877776666543322 34455555543211100 01223333333
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---------CC------CCCCEEEEecch
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---------AV------PKQPVYLWTLPM 238 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---------~~------~~~~~~~~~~p~ 238 (485)
....... .. ...++.++++|||||||.||+|+++|+++..........+ .+ ..+++++...|+
T Consensus 151 ~~~~~~~-~~-~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl 228 (533)
T PRK07798 151 AGSPERD-FG-ERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPAPPL 228 (533)
T ss_pred ccCCcCC-CC-CCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEecch
Confidence 2221111 11 1233567999999999999999999999876544322211 11 567889999999
Q ss_pred hhHhHHHHHHHHHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHH-HHhCC---CCCCCCCCCceEEeccCCC
Q 036361 239 FHANGWGYTWGMAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLN-MISNS---PDFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 239 ~~~~g~~~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~-~l~~~---~~~~~l~~lr~i~~~g~~l 312 (485)
+|..++..++.++..|+++++.+ .+++..+++.++++++|.+.++|..+. .+... .....++++|.+++||+++
T Consensus 229 ~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~i~~gG~~~ 308 (533)
T PRK07798 229 MHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALEARGPYDLSSLFAIASGGALF 308 (533)
T ss_pred hhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhcccccCCCCceEEEEECCCCC
Confidence 99999988899999999999998 789999999999999999999986543 23222 1234677999999999999
Q ss_pred Chhhhhhhhc-c-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccC--ccccCcceeEEecCCCCCcccCC
Q 036361 313 PAPVLSRTES-M-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQG--VKTVGLTEVDVVNPETGESVKRD 388 (485)
Q Consensus 313 ~~~~~~~~~~-~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--~~~~~~~~~~i~~~~~~~~~~~g 388 (485)
++++.+++.+ + +..+++.||+||++.+........ ....| .+.++. .++|+++ +++++++|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~-------------~~~~g~~~~~~~~-~~~i~~~-~~~~~~~g 373 (533)
T PRK07798 309 SPSVKEALLELLPNVVLTDSIGSSETGFGGSGTVAKG-------------AVHTGGPRFTIGP-RTVVLDE-DGNPVEPG 373 (533)
T ss_pred CHHHHHHHHHHcCCCeEEeeecccccccccccCCCCC-------------CccCCCCccCCCc-eEEEECC-CCCCCCCC
Confidence 9999999984 5 789999999999975544332110 01223 556666 8999996 67788888
Q ss_pred CceecEEEEecCcccccccCChhhhcccccC---CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhc
Q 036361 389 GVSLGEVVLRGGCVTVGYFKDKESTRRCISD---NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYS 465 (485)
Q Consensus 389 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~---~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~ 465 (485)
....|+++ .++.++.||+++++.+...|.. ++||+|||++++++||.++++||.+|+++.+|.+|++.+||+++.+
T Consensus 374 ~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~~G~~v~~~eIE~~l~~ 452 (533)
T PRK07798 374 SGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDRARVEADGTITLLGRGSVCINTGGEKVFPEEVEEALKA 452 (533)
T ss_pred CCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcEEEEcCCCcEEEEccccceEecCCEEeCHHHHHHHHHh
Confidence 32226665 5668999999999988877743 3599999999999999999999999999999999999999999999
Q ss_pred CcCcceeEEEeccCCCCCC
Q 036361 466 NTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 466 ~~~v~~~~v~~~~~~~~g~ 484 (485)
+|+|.+++|++.++...|+
T Consensus 453 ~~~v~~~~v~~~~~~~~~~ 471 (533)
T PRK07798 453 HPDVADALVVGVPDERWGQ 471 (533)
T ss_pred CccceeEEEEeccCcccCc
Confidence 9999999999999877665
No 106
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=4.7e-56 Score=440.87 Aligned_cols=385 Identities=24% Similarity=0.342 Sum_probs=328.4
Q ss_pred HHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCH
Q 036361 21 ERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA 100 (485)
Q Consensus 21 ~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~ 100 (485)
..+++.+|+++|+.+.++++||.||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.
T Consensus 10 ~~~a~~~~~~~a~~~~~~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la~~~~G~~~v~~~~~~~~ 89 (458)
T PRK09029 10 RHWAQVRPQAIALRLNDEVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLALLQCGARVLPLNPQLPQ 89 (458)
T ss_pred HHHHHhCCCceeeecCCcceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEeecCCCCCH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCC
Q 036361 101 HNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYK 180 (485)
Q Consensus 101 ~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (485)
+++..+++.+++++++++.+.... .. ..... .. . . .. .
T Consensus 90 ~~~~~~~~~~~~~~~i~~~~~~~~-~~----------~~~~~-~~------------------------~---~-~~--~ 127 (458)
T PRK09029 90 PLLEELLPSLTLDFALVLEGENTF-SA----------LTSLH-LQ------------------------L---V-EG--A 127 (458)
T ss_pred HHHHHHHHhcCCCEEEEcCcccch-hh----------ccccc-cc------------------------c---c-cc--c
Confidence 999999999999999997654221 00 00000 00 0 0 00 0
Q ss_pred CCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec
Q 036361 181 WVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL 260 (485)
Q Consensus 181 ~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~ 260 (485)
......++++++++|||||||.||+|.+||+++..++......+...++++++..+|++|.+++..++.++..|+++++.
T Consensus 128 ~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~~~~~~~l~~G~~v~~~ 207 (458)
T PRK09029 128 HAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQGIVWRWLYAGATLVVR 207 (458)
T ss_pred CcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhhHHHHHHHhCCceEEeC
Confidence 01124567899999999999999999999999999888888888899999999999999999988778889999999887
Q ss_pred ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccc
Q 036361 261 RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLV 340 (485)
Q Consensus 261 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~ 340 (485)
+. ..+++.+ .++|.+..+|+++..+...... ..++|.+++||+++++.+.+.+.+++.++++.||+||++...
T Consensus 208 ~~---~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~--~~~l~~i~~gG~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~ 280 (458)
T PRK09029 208 DK---QPLEQAL--AGCTHASLVPTQLWRLLDNRSE--PLSLKAVLLGGAAIPVELTEQAEQQGIRCWCGYGLTEMASTV 280 (458)
T ss_pred Ch---HHHHHHH--hhceeeecChHHHHHHHhcccc--CCcceEEEECCCCCCHHHHHHHHHcCCcEeccccccccCcce
Confidence 74 4566777 3899999999999998876432 457999999999999999999887899999999999998654
Q ss_pred cccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCC
Q 036361 341 VSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDN 420 (485)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~ 420 (485)
+.... ....++|.|.+++ .++|++ |||+++|+.++.||+++++.+..... +
T Consensus 281 ~~~~~-------------~~~~~~G~~~~~~-~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~~~-~ 331 (458)
T PRK09029 281 CAKRA-------------DGLAGVGSPLPGR-EVKLVD--------------GEIWLRGASLALGYWRQGQLVPLVND-E 331 (458)
T ss_pred eccCC-------------CCCCCCCCCCCCC-EEEEeC--------------CEEEEecCceeeeeecCccccccccC-C
Confidence 33210 0124689999998 888865 89999999999999998877654433 7
Q ss_pred CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 421 GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 421 ~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|||+|++| ||.+++.||.+|+||++|.+|+|.+||++|.++|+|.+++|++.+++.+||
T Consensus 332 ~~~~TGD~~~~~-~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~~~v~~~~~~~~~~ 394 (458)
T PRK09029 332 GWFATRDRGEWQ-NGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQVFVVPVADAEFGQ 394 (458)
T ss_pred CccCCCCcEEEe-CCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcceEEEEccCCcccCc
Confidence 899999999999 999999999999999999999999999999999999999999999998876
No 107
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.2e-55 Score=444.14 Aligned_cols=429 Identities=24% Similarity=0.353 Sum_probs=343.1
Q ss_pred cEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhc
Q 036361 31 PSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHS 110 (485)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (485)
.|+...++.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++++++..+.+++..+++.+
T Consensus 3 ~~~~~~~~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~ 82 (509)
T PRK12406 3 ATIISGDRRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDS 82 (509)
T ss_pred eEEEECCeeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhcc
Confidence 46777889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCC--ccccccccccccccccCCCCCCCCCCCCCC
Q 036361 111 ESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSP--TVTVDFIDTYEGFVEEGDPKYKWVRPRSEW 188 (485)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (485)
++++++++....+.+.+.... ...++................ .........+++....... ......+
T Consensus 83 ~~~~i~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 152 (509)
T PRK12406 83 GARVLIAHADLLHGLASALPA------GVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEP----YDGPPVP 152 (509)
T ss_pred CCcEEEEccchhhhhhhhhhc------ccceeecccccccccccccccccccCCCCccCHHHHhcccCc----cCCCCCC
Confidence 999999988766554333211 111221111100000000000 0000112233333222111 1123467
Q ss_pred CcEEEEecCCCCCCcccEEeccHHH---HHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCH
Q 036361 189 DPMVLNYTSGTTSSPKGVVHSHRGI---FILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDA 265 (485)
Q Consensus 189 ~~~~i~~TSGtTG~pK~v~~s~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~ 265 (485)
++++++|||||||.||+|.++|... ..........+++.++++++...|++|..+....+.++..|+++++.+.+++
T Consensus 153 ~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (509)
T PRK12406 153 QPQSMIYTSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDP 232 (509)
T ss_pred CceEEEECCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCH
Confidence 9999999999999999999876553 3333444556778899999999999999887777777888999999888899
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhhc-cCCeeeeccCCccccccc
Q 036361 266 SAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTES-MGFVVCHGYGLTETAGLV 340 (485)
Q Consensus 266 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~ 340 (485)
..+++.++++++|.+.++|++++.|++.. ...+++++|.++.+|+++++++.+++.+ ++..+++.||+||++.++
T Consensus 233 ~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~ 312 (509)
T PRK12406 233 EELLQLIERHRITHMHMVPTMFIRLLKLPEEVRAKYDVSSLRHVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVT 312 (509)
T ss_pred HHHHHHHHHcCCeEEEccHHHHHHHHhCchhhcccCCCCceeEEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceE
Confidence 99999999999999999999999998654 2345789999999999999999999985 589999999999998765
Q ss_pred cccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccc-cccCChhhhcccccC
Q 036361 341 VSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTV-GYFKDKESTRRCISD 419 (485)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~-gy~~~~~~~~~~~~~ 419 (485)
+.+... ....++++|.+.++. .++++|+ ++++++.| +.|||++++++++. ||+++++.+...+.
T Consensus 313 ~~~~~~----------~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~~~y~~~~~~~~~~~~- 377 (509)
T PRK12406 313 FATSED----------ALSHPGTVGKAAPGA-ELRFVDE-DGRPLPQG--EIGEIYSRIAGNPDFTYHNKPEKRAEIDR- 377 (509)
T ss_pred ecCccc----------ccccCCCcCccCCCc-EEEEECC-CCCCCCCC--CceEEEEECCccccccccCCchhcccccC-
Confidence 543211 112235789999998 9999996 78899888 88999999998875 89998888777665
Q ss_pred CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 420 NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 420 ~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++||+|||++++++||.+++.||.+|++|++|.+|++.+||+.|.++++|.+++|++.+++..|+
T Consensus 378 ~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~~~v~~~~~~~~~~ 442 (509)
T PRK12406 378 GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHDCAVFGIPDAEFGE 442 (509)
T ss_pred CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeEEEEEeeeccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999887665
No 108
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=2e-56 Score=439.93 Aligned_cols=369 Identities=16% Similarity=0.211 Sum_probs=306.0
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 39 TYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
-+.|+||.++++++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.++++++++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~ 98 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWG 98 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEe
Confidence 57899999999999999999988 57999999999999999999999999999999999999999999999999999998
Q ss_pred cCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecC
Q 036361 118 DHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTS 197 (485)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TS 197 (485)
+.+.... . .. . . . . ......++++++++|||
T Consensus 99 ~~~~~~~-------------~-----~~-~---------------~---~------~------~~~~~~~~~~~~i~~TS 129 (452)
T PRK07445 99 LDQLKLS-------------H-----PP-P---------------L---P------S------QGILPNLETGWIMIPTG 129 (452)
T ss_pred cCccccc-------------c-----CC-C---------------C---C------c------cccCCCCCCcEEEEeCC
Confidence 7643210 0 00 0 0 0 0 00112457899999999
Q ss_pred CCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCc
Q 036361 198 GTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNV 277 (485)
Q Consensus 198 GtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~ 277 (485)
||||.||+|++||+++..++......+.+.+ ++.++.+|++|.+|+..++.++..|+++++.+..+.........++++
T Consensus 130 GTTG~PKgV~~t~~~l~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~ 208 (452)
T PRK07445 130 GSSGQIRFAIHTWETLTASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSD 208 (452)
T ss_pred CCCCCCcEEEechHHHHHHHHHHHHHhcCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCc
Confidence 9999999999999999888877776666654 467889999999999888899999999998874322222344457899
Q ss_pred eeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHHH
Q 036361 278 THMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEER 357 (485)
Q Consensus 278 t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~ 357 (485)
|++.++|++++.+.+.. ...++++|.+++||++++++..++++++++++++.||+||++..++.... ...
T Consensus 209 t~~~~vP~~l~~l~~~~-~~~l~~l~~i~~gG~~l~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~---------~~~ 278 (452)
T PRK07445 209 FFLSLVPTQLQRLLQLR-PQWLAQFRTILLGGAPAWPSLLEQARQLQLRLAPTYGMTETASQIATLKP---------DDF 278 (452)
T ss_pred eEEEehHHHHHHHHhhC-hhhhhcceEEEECCccCCHHHHHHHHhcCCeEecCcchhhhcccccccCc---------hhh
Confidence 99999999999998632 34578999999999999999999888779999999999999765443211 111
Q ss_pred hhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceE
Q 036361 358 ARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYV 437 (485)
Q Consensus 358 ~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l 437 (485)
.....++|.|.+++ +++|+ ++ +.|||+++|++++.||+++.. ..++||+|||+|++|+||++
T Consensus 279 ~~~~~~~G~~~p~~-~v~i~---------~g--~~Gel~v~g~~~~~gY~~~~~------~~~g~~~TGDl~~~d~dG~l 340 (452)
T PRK07445 279 LAGNNSSGQVLPHA-QITIP---------AN--QTGNITIQAQSLALGYYPQIL------DSQGIFETDDLGYLDAQGYL 340 (452)
T ss_pred ccCCCcCCccCCCC-eEEEc---------CC--CcceEEEeCCccchhhcCCcc------CCCCEEECCCEEEEcCCCCE
Confidence 12235789999998 89887 23 679999999999999997532 23789999999999999999
Q ss_pred EEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 438 EIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 438 ~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
++.||.+|+||++|++|+|.+||++|.+||+|.+|+|++.+++..|++
T Consensus 341 ~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~a~V~g~~~~~~g~~ 388 (452)
T PRK07445 341 HILGRNSQKIITGGENVYPAEVEAAILATGLVQDVCVLGLPDPHWGEV 388 (452)
T ss_pred EEEeecCCEEEECCEEECHHHHHHHHHhCCCcceEEEEeccCcCCCcE
Confidence 999999999999999999999999999999999999999999988863
No 109
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=8.5e-56 Score=444.54 Aligned_cols=419 Identities=25% Similarity=0.356 Sum_probs=343.9
Q ss_pred cEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhc
Q 036361 31 PSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHS 110 (485)
Q Consensus 31 ~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 110 (485)
+++.+.++.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++..+.+++..+++.+
T Consensus 3 ~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~ 82 (502)
T PRK08276 3 VIMAPSGEVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDS 82 (502)
T ss_pred eEecCCCcEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcC
Confidence 46667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCCCCCCCCc
Q 036361 111 ESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDP 190 (485)
Q Consensus 111 ~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (485)
++++++++....+.+.+....... ....+++.+... .....+++....... ......++.
T Consensus 83 ~~~~ii~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~----~~~~~~~~~ 142 (502)
T PRK08276 83 GAKVLIVSAALADTAAELAAELPA--GVPLLLVVAGPV--------------PGFRSYEEALAAQPD----TPIADETAG 142 (502)
T ss_pred CCCEEEEccchhhHHHHHhhhccc--cccEEEEeCCCC--------------CccccHHHHHhcCCC----CCCCCCCcc
Confidence 999999998777666554433221 123333332111 111222222221111 112345678
Q ss_pred EEEEecCCCCCCcccEEeccHHHHHHH------HHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCC
Q 036361 191 MVLNYTSGTTSSPKGVVHSHRGIFILT------ANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFD 264 (485)
Q Consensus 191 ~~i~~TSGtTG~pK~v~~s~~~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~ 264 (485)
++++|||||||.||+|.++|.++.... ...........++++++..|++|..++...+.++..|+++++.+.++
T Consensus 143 a~i~~TSGtTG~PK~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~ 222 (502)
T PRK08276 143 ADMLYSSGTTGRPKGIKRPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFD 222 (502)
T ss_pred eEEEECCCCCCCCceEEEccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCC
Confidence 999999999999999999887754322 11111222346789999999999999888788999999999998899
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCcccccc
Q 036361 265 ASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGL 339 (485)
Q Consensus 265 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~ 339 (485)
+..+++.++++++|++.++|+++..+.+.. +..+++++|.++++|++++.++.+++. .++..+++.||+||++++
T Consensus 223 ~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~ 302 (502)
T PRK08276 223 AEEALALIERYRVTHSQLVPTMFVRMLKLPEEVRARYDVSSLRVAIHAAAPCPVEVKRAMIDWWGPIIHEYYASSEGGGV 302 (502)
T ss_pred HHHHHHHHHHhCCeEEEehHHHHHHHHhCccccCCCCCcccceEEEecCCCCCHHHHHHHHHHhCcHhhhhcccccccce
Confidence 999999999999999999999999998765 233578999999999999999999998 458889999999999876
Q ss_pred ccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccC
Q 036361 340 VVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISD 419 (485)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 419 (485)
++..... .....+++|.|. +. .++|+|+ ++.+++.| +.|||+++|+.++.||+++++.+...+.+
T Consensus 303 ~~~~~~~----------~~~~~~~~G~~~-~~-~~~i~d~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~ 367 (502)
T PRK08276 303 TVITSED----------WLAHPGSVGKAV-LG-EVRILDE-DGNELPPG--EIGTVYFEMDGYPFEYHNDPEKTAAARNP 367 (502)
T ss_pred eEecCcc----------ccccCCCcceec-cc-EEEEECC-CCCCCcCC--CceEEEEECCCccchhcCCHHHHHHHhcC
Confidence 5543210 112235789999 76 9999995 68889888 88999999999999999999999998886
Q ss_pred CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 420 NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 420 ~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++||+|||+++++++|.+++.||.+|+++++|.++++.+||..+.++|+|.+++|++.+++..||
T Consensus 368 ~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~~~v~~~~~~~~~~ 432 (502)
T PRK08276 368 HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVADVAVFGVPDEEMGE 432 (502)
T ss_pred CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcceEEEEeCCCcccCc
Confidence 79999999999999999999999999999999999999999999999999999999999987776
No 110
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-55 Score=448.46 Aligned_cols=433 Identities=21% Similarity=0.241 Sum_probs=340.5
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCC---eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNN---TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~---~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.++.++|+..++.+|+..++...+ +.+||.||++++.++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA~~~~G~~ 100 (579)
T PRK09192 21 PTLVEALDYAALGEAGMNFYDRRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDFVEAFFACQYAGLV 100 (579)
T ss_pred hhHHHHHHHhhccCCceEEEecCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhHHHHHHHHHHcCCe
Confidence 489999999999888666553332 67999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCC-------HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccc
Q 036361 91 LNNINTRLD-------AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVD 163 (485)
Q Consensus 91 ~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (485)
++|+++..+ .+++..+++.++++++|++....+.+.+..... ..++...
T Consensus 101 ~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~------~~~~~~~------------------ 156 (579)
T PRK09192 101 PVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGN------PLLHVLS------------------ 156 (579)
T ss_pred eEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccc------cccceee------------------
Confidence 999986543 588999999999999999987666554432111 1111110
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH-HhCCCCCCEEEEecchhhHh
Q 036361 164 FIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI-DWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~~~ 242 (485)
+..+....... ...+...++++++++|||||||.||+|.++|+++..++..... .+++.++|+++..+|++|.+
T Consensus 157 ----~~~~~~~~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 231 (579)
T PRK09192 157 ----HAWFKALPEAD-VALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDM 231 (579)
T ss_pred ----hhhhcccCCCc-cccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcc
Confidence 00000000000 1112245679999999999999999999999999988877776 67889999999999999999
Q ss_pred HHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC-----CCCCCCCCceEEeccCCC
Q 036361 243 GWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP-----DFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 243 g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-----~~~~l~~lr~i~~~g~~l 312 (485)
++.. ++.++..|+++++.+. .++..+++.+.+++++.++..|..+..+.... ...+++++|.+++||+++
T Consensus 232 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~~~l~~lr~~~~gG~~l 311 (579)
T PRK09192 232 GLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSKDLAELDLSCWRVAGIGADMI 311 (579)
T ss_pred hhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccccccccchhhhheeEecCccC
Confidence 9875 5667788888876652 36889999999999998877666665554322 224578999999999999
Q ss_pred Chhhhhhhhcc----C---CeeeeccCCccccccccccCCCCCCC--CCC---------------hHHHhhhhhccCccc
Q 036361 313 PAPVLSRTESM----G---FVVCHGYGLTETAGLVVSCSWKPEWD--KLP---------------LEERARLKARQGVKT 368 (485)
Q Consensus 313 ~~~~~~~~~~~----~---~~i~~~Yg~tE~~~~~~~~~~~~~~~--~~~---------------~~~~~~~~~~~G~~~ 368 (485)
++.+.+.+.+. + ..+++.||+||++..++......... ... .........++|.+.
T Consensus 312 ~~~~~~~~~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~ 391 (579)
T PRK09192 312 RPDVLHQFAEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKAL 391 (579)
T ss_pred CHHHHHHHHHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcC
Confidence 99999888743 2 34899999999986655432211000 000 000001124789999
Q ss_pred cCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEE
Q 036361 369 VGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVII 448 (485)
Q Consensus 369 ~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~ 448 (485)
++. +++|+|+ +++.++.+ +.|||+++|++++.||+++ +.+...+..++||+|||+|++ +||+++++||.+|+||
T Consensus 392 p~~-~v~i~d~-~~~~~~~g--~~Gel~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg~~-~~G~l~~~GR~dd~i~ 465 (579)
T PRK09192 392 PGH-EIEIRNE-AGMPLPER--VVGHICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLGYL-LDGYLYITGRAKDLII 465 (579)
T ss_pred CCc-EEEEECC-CCCCCCCC--CEEEEEecCCchhhhhcCC-ccccccccCCceeeccceeeE-ECCEEEEEeccccEEE
Confidence 998 9999996 67888888 8899999999999999999 666666766899999999999 8999999999999999
Q ss_pred eCCeeechHHHHHHHhcCcCcc--eeEEEeccCCC
Q 036361 449 SGGENICSAEVESVLYSNTAVN--EAAVVARPDKF 481 (485)
Q Consensus 449 ~~G~~i~~~~ie~~l~~~~~v~--~~~v~~~~~~~ 481 (485)
++|++|+|.+||++|.+||+|. +++|++.+++.
T Consensus 466 ~~G~~v~p~eIE~~l~~~p~V~~~~~~v~~~~~~~ 500 (579)
T PRK09192 466 INGRNIWPQDIEWIAEQEPELRSGDAAAFSIAQEN 500 (579)
T ss_pred ECCCccCHHHHHHHHHhcCCccCCcEEEEEeccCC
Confidence 9999999999999999999998 89999998874
No 111
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.7e-55 Score=463.97 Aligned_cols=432 Identities=14% Similarity=0.153 Sum_probs=328.3
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
.....++.++|+++++.+|+++|+++.++++||+||+++++++|+.|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 443 ~~~~~sl~~ll~~~a~~~pd~~Al~~~~~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~lA~~~aGa 522 (994)
T PRK07868 443 DHTRISLGRIIAEQARDAPKGEFLLFDGRVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAIAALSRLGA 522 (994)
T ss_pred CCCCccHHHHHHHHHHHCCCCeEEEeCCceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhcCC
Confidence 36778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|++|. +++.++++.++++++|++.+..+.+.+. ...+++++..... ... .... .....++
T Consensus 523 v~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~---------~~~iiv~~~~~~~-~~~-~~~~---~~~~~~~ 585 (994)
T PRK07868 523 VAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL---------PGRVLVLGGGESR-DLD-LPDD---ADVIDME 585 (994)
T ss_pred EEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc---------CceEEEecCCccc-ccc-CCcc---hhhhhhh
Confidence 99999985 6789999999999999987665543221 2345554432100 000 0000 0001111
Q ss_pred cccccCCCCCC--CCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHH
Q 036361 170 GFVEEGDPKYK--WVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYT 247 (485)
Q Consensus 170 ~~~~~~~~~~~--~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~ 247 (485)
+.......... ...+..++++++++|| ||||.||++.++|.++..........+.+.++|++++.+|++|.+++...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~~gl~~~ 664 (994)
T PRK07868 586 KIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHESGLLVS 664 (994)
T ss_pred hcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHHhHHHHH
Confidence 11110000000 0112236799999998 68888888888887776655555556778899999999999999998775
Q ss_pred HH-HHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChhhhhhhh-cc
Q 036361 248 WG-MAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAPVLSRTE-SM 323 (485)
Q Consensus 248 ~~-~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~~~~~~~-~~ 323 (485)
+. .+..|+++++.+.+++..+++.|+++++|+++++|++++.|++... ...++++|.++ |+.+++++.+++. .+
T Consensus 665 l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~~~~~~~~slr~~~--g~gl~~~l~~~~~~~~ 742 (994)
T PRK07868 665 LGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDPAFVLHGNHPVRLFI--GSGMPTGLWERVVEAF 742 (994)
T ss_pred HHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCCccCCCCceEEEe--cCCCCHHHHHHHHHHh
Confidence 54 4455555666678999999999999999999999999999987642 23566888766 3459999999988 45
Q ss_pred C-CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEe--cC--------CCC--CcccCCCc
Q 036361 324 G-FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVV--NP--------ETG--ESVKRDGV 390 (485)
Q Consensus 324 ~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~--~~--------~~~--~~~~~g~~ 390 (485)
+ +.+++.||+||++.+..... ....+++|+|.+++.+++|. |+ ++| +++++|
T Consensus 743 ~~~~l~~~YG~TE~~~~~~~~~-------------~~~~~svG~p~pg~~~v~i~~~d~~~g~li~d~~G~~~~~~~g-- 807 (994)
T PRK07868 743 APAHVVEFFATTDGQAVLANVS-------------GAKIGSKGRPLPGAGRVELAAYDPEHDLILEDDRGFVRRAEVN-- 807 (994)
T ss_pred CchheeeeeecccccccccccC-------------CCCCcccCCccCCCCceeEEEecCcCCceeecCCceEEEcCCC--
Confidence 4 78999999999865432110 01235899999996445543 21 244 456677
Q ss_pred eecEEEEecCcccccccCChhhhc--cccc-CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCc
Q 036361 391 SLGEVVLRGGCVTVGYFKDKESTR--RCIS-DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNT 467 (485)
Q Consensus 391 ~~Gel~v~~~~~~~gy~~~~~~~~--~~~~-~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~ 467 (485)
+.|||+++++..+ +++.+. ..|. .++||+|||+|++|+||+|+|+||.+|+||++|.+|+|.|||++|.+||
T Consensus 808 e~Gel~~~~~~~~-----~p~~t~~~~~~~~~dgw~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~EIE~~L~~hp 882 (994)
T PRK07868 808 EVGVLLARARGPI-----DPTASVKRGVFAPADTWISTEYLFRRDDDGDYWLVDRRGSVIRTARGPVYTEPVTDALGRIG 882 (994)
T ss_pred CceEEEEecCCCC-----ChhhhhHhcccccCCEEEeccceEEEcCCCCEEEeccCCCEEEeCCceEcHHHHHHHHhcCC
Confidence 8899999997532 333221 1232 3789999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEeccCCC
Q 036361 468 AVNEAAVVARPDKF 481 (485)
Q Consensus 468 ~v~~~~v~~~~~~~ 481 (485)
+|.+|+|++.+++.
T Consensus 883 ~V~~aaVvg~~d~~ 896 (994)
T PRK07868 883 GVDLAVTYGVEVGG 896 (994)
T ss_pred CeeEEEEEeecCCC
Confidence 99999999999875
No 112
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=3.7e-55 Score=428.74 Aligned_cols=394 Identities=22% Similarity=0.260 Sum_probs=330.4
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 41 TWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
||.||.+.++++|+.|.+ .|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.+++++++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred cchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCC
Q 036361 120 LHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGT 199 (485)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGt 199 (485)
.....+... ....+........ ................++++++++|||||
T Consensus 81 ~~~~~~~~~---------~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~i~~TSGT 131 (408)
T TIGR01733 81 ALASRLAGL---------VLPIILVDPLELA--------------------ALDDAPAPPPPDAPSGPDDLAYVIYTSGS 131 (408)
T ss_pred chhhhcccc---------CCceEEechhhhh--------------------hcccccccccccCCCCCCCcEEEEEcCCC
Confidence 765543221 1112222111100 00000000000111346799999999999
Q ss_pred CCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCC---HHHHHHHHHhcC
Q 036361 200 TSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFD---ASAISDLIQKHN 276 (485)
Q Consensus 200 TG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~---~~~~~~~i~~~~ 276 (485)
||.||+|.+||+++..++......+.+.+++++++..|++|..++..++.++..|+++++.+... +..+.+.+++++
T Consensus 132 tG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 132 TGRPKGVVVTHRSLVNLLAWLARRYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred CCCCCEEEeccHHHHHHHHHHHHhcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999999999999988888888999999999999999999988999999999999887543 688999999999
Q ss_pred ceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-ccC-CeeeeccCCccccccccccCCCCCCCCCCh
Q 036361 277 VTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SMG-FVVCHGYGLTETAGLVVSCSWKPEWDKLPL 354 (485)
Q Consensus 277 ~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~-~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~ 354 (485)
+|.+.++|.+++.+.+... ..++++|.++++|+++++++.+.+. .++ +.+++.||+||+++++............
T Consensus 212 ~t~l~~~p~~~~~l~~~~~-~~~~~l~~v~~~g~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~-- 288 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP-PALASLRLVILGGEALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPR-- 288 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh-hcccCceEEEEeCccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCC--
Confidence 9999999999999988754 6788999999999999999999998 555 8999999999999877533221111100
Q ss_pred HHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCC------C--eeecC
Q 036361 355 EERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDN------G--WFYTG 426 (485)
Q Consensus 355 ~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~------~--~~~TG 426 (485)
. ...++|.+.+++ +++|++++ +++++.| +.|||++++++++.||+++++.+...|..+ + ||+||
T Consensus 289 ---~-~~~~~G~~~~~~-~~~i~~~~-~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TG 360 (408)
T TIGR01733 289 ---E-SPVPIGRPLANT-RLYVLDDD-LRPVPVG--VVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTG 360 (408)
T ss_pred ---c-cccccCcccCCc-eEEEECCC-CCCCCCC--CceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECC
Confidence 0 256899999998 99999985 8889888 889999999999999999999888777533 2 99999
Q ss_pred ceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEE
Q 036361 427 DIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAV 474 (485)
Q Consensus 427 D~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v 474 (485)
|++++|++|++++.||.+|+++++|++++|.+||+++..+++|.+|+|
T Consensus 361 Dl~~~d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~~~v 408 (408)
T TIGR01733 361 DLVRYLPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVREAVV 408 (408)
T ss_pred ceEEEcCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhhhcC
Confidence 999999999999999999999999999999999999999999999875
No 113
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-54 Score=398.52 Aligned_cols=445 Identities=24% Similarity=0.262 Sum_probs=351.9
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
-...|+++++.++++++|+++|+++.+ +++||+|++++++++|+.|+..|++.||.||++|+|.+|++.++|+++++|
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~~~~~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lWlGLaKlG 153 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYEGPFQSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALWLGLAKLG 153 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEeCCCceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHHHhHHhhC
Confidence 457899999999999999999999987 799999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTY 168 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (485)
++...||.+...+.|.+.++.++++.+|++.+..+.+.++.+.... ..-.+...+..... .+..++
T Consensus 154 v~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~--~~i~~~~~~~~~~~------------~g~~~L 219 (649)
T KOG1179|consen 154 VITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIK--NGIHVFSLGPTSVP------------DGIESL 219 (649)
T ss_pred ceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhh--ccceEEecCCCCCC------------chHHHH
Confidence 9999999999999999999999999999999988877777333221 11222323222211 223333
Q ss_pred ccccccCCCCCC---CCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 169 EGFVEEGDPKYK---WVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
...++.....+. ........++++.+|||||||.||+.+++|......+......++++++|+++.++|++|.+|..
T Consensus 220 ~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~i 299 (649)
T KOG1179|consen 220 LAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGI 299 (649)
T ss_pred HHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHHHH
Confidence 333333333331 22344567899999999999999999999999988887788889999999999999999998876
Q ss_pred H-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc
Q 036361 246 Y-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM 323 (485)
Q Consensus 246 ~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~ 323 (485)
. +.+++..|+++++-.+|+..++|+...+|+||++.....+++.|++.+....-+.-+.-+.-|..+.++.++.+. +|
T Consensus 300 lGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~er~HkVRla~GNGLR~diW~~Fv~RF 379 (649)
T KOG1179|consen 300 LGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPEERQHKVRLAYGNGLRPDIWQQFVKRF 379 (649)
T ss_pred HHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChhhcCceEEEEecCCCCchHHHHHHHHc
Confidence 6 788999999999999999999999999999999999999999999998444444445566778888999999988 78
Q ss_pred CC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcc----------cCCCcee
Q 036361 324 GF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESV----------KRDGVSL 392 (485)
Q Consensus 324 ~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~----------~~g~~~~ 392 (485)
|. +|...||+||...-.......-. .... .....+.+... ++-=+|+++++++ ++| |+
T Consensus 380 g~~~IgE~YgaTEgn~~~~N~d~~vG-------A~G~-~~~~~~~l~p~-~LIk~D~~t~E~iRd~~G~Ci~~~~G--Ep 448 (649)
T KOG1179|consen 380 GIIKIGEFYGATEGNSNLVNYDGRVG-------ACGF-MSRLLKLLYPF-RLIKVDPETGEPIRDSQGLCIPCPPG--EP 448 (649)
T ss_pred CCCeEEEEeccccCcceeeeecCccc-------cccc-hhhhhhhccce-EEEEecCCCCceeecCCceEEECCCC--CC
Confidence 76 59999999998654443321100 0000 00112223333 4444566666654 344 77
Q ss_pred cEEEEe--cCc---ccccccCChhhhcccc------cCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 393 GEVVLR--GGC---VTVGYFKDKESTRRCI------SDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 393 Gel~v~--~~~---~~~gy~~~~~~~~~~~------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
|.++-+ ... -+.||.++.+.+...+ ..|-||.|||+-.+|+.|++||.+|.+|.++.+|++|+..|||+
T Consensus 449 GlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFkkGD~~f~tGDlLv~D~~GylYF~DRtGDTFRWKGENVsTtEVe~ 528 (649)
T KOG1179|consen 449 GLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFKKGDVYFNTGDLLVADELGYLYFKDRTGDTFRWKGENVSTTEVED 528 (649)
T ss_pred ceEEEEeccCCchhhhccccCchhhhhhhhHHhhhccCcEEEeeCcEEEEecCCcEEEeccCCCceeecCCcccHHHHHH
Confidence 866432 222 3789999777776653 22559999999999999999999999999999999999999999
Q ss_pred HHhcCcCcceeEEEeccCC
Q 036361 462 VLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~ 480 (485)
+|..+.+++|+.|+|+.-+
T Consensus 529 ~l~~~~~~~dv~VYGV~VP 547 (649)
T KOG1179|consen 529 VLSALDFLQDVNVYGVTVP 547 (649)
T ss_pred HHhhhccccceeEEEEecC
Confidence 9999999999999998754
No 114
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=2e-54 Score=427.15 Aligned_cols=383 Identities=27% Similarity=0.448 Sum_probs=320.7
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 41 TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++++++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred chHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCC
Q 036361 121 HSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTT 200 (485)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 200 (485)
..... .....+. ..................+++++++||||||
T Consensus 81 ~~~~~-------------~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtT 123 (436)
T TIGR01923 81 LEEKD-------------FQADSLD------------------------RIEAAGRYETSLSASFNMDQIATLMFTSGTT 123 (436)
T ss_pred ccccc-------------eeecchH------------------------hhhhcccccccccccCCcCceEEEEeCCCCC
Confidence 32100 0000000 0000000000111224567899999999999
Q ss_pred CCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceee
Q 036361 201 SSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHM 280 (485)
Q Consensus 201 G~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~ 280 (485)
|.||+|.++|+++..++......++++++|++++..|++|.+++..++.++..|+++++.+.++ .+++.++++++|++
T Consensus 124 G~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~--~~~~~l~~~~~t~~ 201 (436)
T TIGR01923 124 GKPKAVPHTFRNHYASAVGSKENLGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKFN--QLLEMIANERVTHI 201 (436)
T ss_pred CCCcEEEEehHHHHHHHHHHHhhcCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchHH--HHHHHHHHhCCeEE
Confidence 9999999999999998888888889999999999999999999988889999999999987653 89999999999999
Q ss_pred ecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhh
Q 036361 281 CGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARL 360 (485)
Q Consensus 281 ~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (485)
.++|+++..+.+.... .+++|.++++|+++++++.+.+++.++.+++.||+||+++.++....... ..
T Consensus 202 ~~~P~~l~~l~~~~~~--~~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~----------~~ 269 (436)
T TIGR01923 202 SLVPTQLNRLLDEGGH--NENLRKILLGGSAIPAPLIEEAQQYGLPIYLSYGMTETCSQVTTATPEML----------HA 269 (436)
T ss_pred EeHHHHHHHHHhCcCC--CCceEEEEECCCCCCHHHHHHHHHhCCceeeEecCCccchhccCcCcccc----------cc
Confidence 9999999999876532 27899999999999999999888889999999999999876654431110 11
Q ss_pred hhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEE
Q 036361 361 KARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIK 440 (485)
Q Consensus 361 ~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~ 440 (485)
...+|.+.+++ ++++...+.+ +.|||+++++.++.||+++++.+...+. ++||+|||++++++||.+++.
T Consensus 270 ~~~~G~~~~~~-~~~i~~~~~~--------~~Gel~v~~~~~~~gy~~~~~~~~~~~~-~~~~~TGD~~~~~~dg~~~~~ 339 (436)
T TIGR01923 270 RPDVGRPLAGR-EIKIKVDNKE--------GHGEIMVKGANLMKGYLYQGELTPAFEQ-QGWFNTGDIGELDGEGFLYVL 339 (436)
T ss_pred ccCCCccCCCc-EEEEEeCCCC--------CceEEEEECCccchhhCCChhhhhhhhc-CCCeeccceEEEcCCCCEEEe
Confidence 12489999998 8888432221 5699999999999999998777766554 799999999999999999999
Q ss_pred ccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 441 DRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 441 gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||.+|++|++|+++++.+||+++.+++.|.+++|++.++...|+
T Consensus 340 GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~~~v~~~~~~~~~~ 383 (436)
T TIGR01923 340 GRRDDLIISGGENIYPEEIETVLYQHPGIQEAVVVPKPDAEWGQ 383 (436)
T ss_pred ccccCeEEeCCEeeCHHHHHHHHHhCCCeeEEEEeCCcchhcCC
Confidence 99999999999999999999999999999999999998876554
No 115
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=1.3e-54 Score=434.08 Aligned_cols=388 Identities=15% Similarity=0.139 Sum_probs=296.7
Q ss_pred cCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc------hHHHHHHhccCCCCCCCCeEEEe
Q 036361 71 APNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLH------SSLVLEALSLFPRDTKRPHLVLV 144 (485)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~------~~~~~~~~~~~~~~~~~~~~i~~ 144 (485)
++|++++++++|||+++|++++|+++.++.+++.++++.++++++|++... .+.+.+..... .. ..+++
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~----~~-~~i~~ 75 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAA----PA-KAIVL 75 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhcc----cc-eEEEE
Confidence 589999999999999999999999999999999999999999999998642 12222221111 11 22222
Q ss_pred cCCcccccCccCCCccccccccccccccccCC------CCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHH
Q 036361 145 DDDAAASSTTTTSPTVTVDFIDTYEGFVEEGD------PKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTA 218 (485)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~ 218 (485)
......... .. ......+.+++.... ..........++++++|+|||||||.||+|++||+++..++.
T Consensus 76 ~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~ 149 (499)
T PLN03051 76 PAAGEPVAV-PL-----REQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCAS 149 (499)
T ss_pred eccCcccCC-cc-----ccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHH
Confidence 211000000 00 001112333321110 000011122458999999999999999999999999887766
Q ss_pred HHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC---
Q 036361 219 NALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--- 294 (485)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--- 294 (485)
.....+++..+|++++..|++|..++..++.++..|+++++.+ .+++..+++.|+++++|++.++|+++..|.+..
T Consensus 150 ~~~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~~ 229 (499)
T PLN03051 150 DGWAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAFA 229 (499)
T ss_pred HHHHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCccc
Confidence 6666678889999999999999999877888999999999887 478899999999999999999999999987653
Q ss_pred -CCCCCCCCceEEeccCCCChhhhhhhhc-c--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccC
Q 036361 295 -DFEPLKTPVQILTAGAPPPAPVLSRTES-M--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVG 370 (485)
Q Consensus 295 -~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 370 (485)
...+++++|.++++|++++++..+++++ + ++.+++.||+||+++.++..... . ....+++|.|.++
T Consensus 230 ~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~------~----~~~~~~~G~p~~~ 299 (499)
T PLN03051 230 MEGLDWSKLRVFASTGEASAVDDVLWLSSVRGYYKPVIEYCGGTELASGYISSTLL------Q----PQAPGAFSTASLG 299 (499)
T ss_pred cccCCchhheEEEecCCCCCHHHHHHHHHhccccceeEeeeccccccceeeccccc------C----CCCCccccCCCCC
Confidence 2346789999999999999998887765 3 47899999999986543321100 0 1123578999999
Q ss_pred cceeEEecCCCCCcccCCCceecEEEEecCcc--cccccCChhhhcccccCCC----------eeecCceEEEecCceEE
Q 036361 371 LTEVDVVNPETGESVKRDGVSLGEVVLRGGCV--TVGYFKDKESTRRCISDNG----------WFYTGDIAVMHVDGYVE 438 (485)
Q Consensus 371 ~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~--~~gy~~~~~~~~~~~~~~~----------~~~TGD~~~~~~~g~l~ 438 (485)
+ +++|+|+ +++++++|..+.|||+++||.+ +.||++++. +. .+. ++ ||+|||+|++|+||+|+
T Consensus 300 ~-~~~ivd~-~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~~-~~-~~~-~g~~~~~~~~~~~~~TGDlg~~d~dG~l~ 374 (499)
T PLN03051 300 T-RFVLLND-NGVPYPDDQPCVGEVALAPPMLGASDRLLNADH-DK-VYY-KGMPMYGSKGMPLRRHGDIMKRTPGGYFC 374 (499)
T ss_pred c-eEEEECC-CCCCCCCCCCcceEEEEecCcCCCCccccCCcc-cc-eee-ecCCccccCCcceeecCCeEEECCCCcEE
Confidence 8 9999995 7888988743579999999976 589997653 32 232 23 78999999999999999
Q ss_pred EEccCCceEEeCCeeechHHHHHHHhc-CcCcceeEEEeccCCCCCC
Q 036361 439 IKDRSKDVIISGGENICSAEVESVLYS-NTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 439 ~~gR~~~~i~~~G~~i~~~~ie~~l~~-~~~v~~~~v~~~~~~~~g~ 484 (485)
|+||.+|+||++|++|+|.|||++|.+ ||+|.+|+|++.+|+.+|+
T Consensus 375 ~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~aavvg~~d~~~g~ 421 (499)
T PLN03051 375 VQGRADDTMNLGGIKTSSVEIERACDRAVAGIAETAAVGVAPPDGGP 421 (499)
T ss_pred EEeccCCEEeeCCEECCHHHHHHHHHhcCCCcceEEEEEecCCCCCc
Confidence 999999999999999999999999996 9999999999999998883
No 116
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.3e-54 Score=414.44 Aligned_cols=438 Identities=25% Similarity=0.355 Sum_probs=354.4
Q ss_pred HHHHHhh-cCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 20 LERAATA-YSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 20 l~~~a~~-~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
+.+..+. .++.+|.++.. ..+||.|+.+++.++|..|.+.|+++||+|++++|+.++++++++||.++|++..
T Consensus 70 ~~~~~~~~~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~ 149 (626)
T KOG1175|consen 70 LDRHIKEKGGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEAVIAMLACARIGAIHS 149 (626)
T ss_pred hhhhhhhcCCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHHHHHHHHHhhcCeEEE
Confidence 4444333 38888998753 4599999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchH---------HHHHHhccCCCCCCC-CeEEEecCCcccccCccCCCcccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSS---------LVLEALSLFPRDTKR-PHLVLVDDDAAASSTTTTSPTVTV 162 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~---------~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~ 162 (485)
++-...++.++...++.++++++|+...... ...++.......... ...+.+.+..
T Consensus 150 ~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~-------------- 215 (626)
T KOG1175|consen 150 SVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRN-------------- 215 (626)
T ss_pred EeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEeccc--------------
Confidence 9999999999999999999999999753322 222222222211000 1111121111
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHH-HHHHHHHHhCCCCCCEEEEecchhhH
Q 036361 163 DFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFI-LTANALIDWAVPKQPVYLWTLPMFHA 241 (485)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~ 241 (485)
....+++.+....+... ..+.+.+|+.+|+|||||||.||++.+++..... .+......+.+++.|++.+.....|.
T Consensus 216 -~d~~~~~~~~~a~~~~~-~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi 293 (626)
T KOG1175|consen 216 -RDLFWSLELKKASPEHP-CVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWI 293 (626)
T ss_pred -ccccHHHHhhhcCCCCC-ceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCee
Confidence 12233333333333332 3456788999999999999999999998876554 44555566789999999999999999
Q ss_pred hHHHH-HHHHHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCCh
Q 036361 242 NGWGY-TWGMAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPA 314 (485)
Q Consensus 242 ~g~~~-~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~ 314 (485)
.+... .+++++.|+++++.+ ++++..+++.+.++++|.+...|+.++.|.+.. ....+++||.+.+.||++.+
T Consensus 294 ~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~~~~~~~sLk~~~S~Gepi~~ 373 (626)
T KOG1175|consen 294 TGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDVTSYSLKSLRTCGSVGEPINP 373 (626)
T ss_pred eccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhccccccccccceEEEEeecCccCCc
Confidence 88877 678999999999986 469999999999999999999999999776654 33344789999999999999
Q ss_pred hhhhhhh-ccCC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCcee
Q 036361 315 PVLSRTE-SMGF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSL 392 (485)
Q Consensus 315 ~~~~~~~-~~~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~ 392 (485)
+..+++. .++. +|++.||+||+|+.++.+..... ...+++.+.|..+. .+.|+|+ +|+++++++ +.
T Consensus 374 ~~~ew~~~~~~~~pv~e~~~qtEtG~~~i~~~~g~~---------p~~pg~~~~p~~g~-~v~i~de-~g~~~~~~~-~~ 441 (626)
T KOG1175|consen 374 EAWEWWKRVTGLDPIYETYGQTETGGICITPKPGKL---------PIKPGSAGKPFPGY-DVQILDE-NGNELPPST-GN 441 (626)
T ss_pred chHHHHHHhcCccchhhceeeeccCceeeeccCCCC---------CcCccccCCCCCCc-ceEEECC-CCCCcCCCC-ce
Confidence 9999998 5666 69999999999999988753321 34467889999999 9999997 899998876 67
Q ss_pred cEEEEecC---cccccccCChhhhcc-ccc-CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCc
Q 036361 393 GEVVLRGG---CVTVGYFKDKESTRR-CIS-DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNT 467 (485)
Q Consensus 393 Gel~v~~~---~~~~gy~~~~~~~~~-~~~-~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~ 467 (485)
|+|+++.+ +.+++|++|++.... .|. -.|+|.|||.+++|+||++++.||.||+|+++|.++++.|||+++.+||
T Consensus 442 G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp 521 (626)
T KOG1175|consen 442 GELRLKPPWPPGMFRTLWGNHERFRAAYFKKFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHP 521 (626)
T ss_pred eEEEEeCCCCccccccccCCHHHhhhhhcccCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCc
Confidence 99999873 889999999983322 222 1689999999999999999999999999999999999999999999999
Q ss_pred CcceeEEEeccCCCCCCC
Q 036361 468 AVNEAAVVARPDKFWGET 485 (485)
Q Consensus 468 ~v~~~~v~~~~~~~~g~~ 485 (485)
.|.|++|++.+|+..||+
T Consensus 522 ~VaEsAvVg~p~~~~ge~ 539 (626)
T KOG1175|consen 522 AVAESAVVGSPDPIKGEV 539 (626)
T ss_pred chhheeeecCCCCCCCeE
Confidence 999999999999999884
No 117
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-53 Score=430.75 Aligned_cols=426 Identities=22% Similarity=0.243 Sum_probs=334.4
Q ss_pred chhHHHHHHHhhcCCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 15 TTLGFLERAATAYSDCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
++.+.|..+|+.+|+.+++...+ +.+||.||+++++++|++|.+.|+++||+|+++++|+++++++++||+++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~~~~g~v~~ 82 (545)
T PRK07768 3 RFTEKMYANARTSPRGMVTGEPDAPVRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGLWMRGASLT 82 (545)
T ss_pred hHHHHHHHHhhCCCcceEEecCCCceEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHHHHcCcccc
Confidence 47788889999999999996654 6899999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHH-------HHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 93 NINTRLDAHNL-------SVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 93 ~l~~~~~~~~l-------~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
++++..+.+++ ..+++.++++.++++............ ....++.+
T Consensus 83 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~------~~~~~~~~--------------------- 135 (545)
T PRK07768 83 MLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEE------KGIRVLTV--------------------- 135 (545)
T ss_pred ccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcc------cCCceeeh---------------------
Confidence 99988776544 456777899999998754433221110 00111111
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCC-CEEEEecchhhHhHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQ-PVYLWTLPMFHANGW 244 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~g~ 244 (485)
+++...... ......++++++++|||||||.||+|+++|+++..++......+++.++ |++++.+|++|..++
T Consensus 136 ---~~l~~~~~~---~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~ 209 (545)
T PRK07768 136 ---ADLLAADPI---DPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGM 209 (545)
T ss_pred ---hhhcccCCC---CcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHH
Confidence 111111110 1123456899999999999999999999999999888877777777776 899999999999998
Q ss_pred HH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC------CCCCCCCCceEEeccCCCC
Q 036361 245 GY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP------DFEPLKTPVQILTAGAPPP 313 (485)
Q Consensus 245 ~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~------~~~~l~~lr~i~~~g~~l~ 313 (485)
.. ++.++..|+++++.+. .++..+++.+++++++.+..+|..+..+.... ...+++++|.++++|++++
T Consensus 210 ~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~lr~~~~~g~~~~ 289 (545)
T PRK07768 210 VGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAKPGAFDLSSLRFALNGAEPID 289 (545)
T ss_pred HHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhccccccCCCchheeeEEeccCCCC
Confidence 75 5567888998888753 37888999999999999988888776655321 1356789999999999999
Q ss_pred hhhhhhhhc----cCC---eeeeccCCccccccccccCCCCCCCC--CChHH-------------HhhhhhccCccccCc
Q 036361 314 APVLSRTES----MGF---VVCHGYGLTETAGLVVSCSWKPEWDK--LPLEE-------------RARLKARQGVKTVGL 371 (485)
Q Consensus 314 ~~~~~~~~~----~~~---~i~~~Yg~tE~~~~~~~~~~~~~~~~--~~~~~-------------~~~~~~~~G~~~~~~ 371 (485)
+...+.+.+ ++. .+++.||+||++..++.......... ...+. ......++|.|.++.
T Consensus 290 ~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~ 369 (545)
T PRK07768 290 PADVEDLLDAGARFGLRPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGL 369 (545)
T ss_pred HHHHHHHHHHHHhcCCCcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCC
Confidence 999888874 344 49999999999876544322111000 00000 012345789999998
Q ss_pred ceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCC
Q 036361 372 TEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGG 451 (485)
Q Consensus 372 ~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G 451 (485)
.++|+|+ ++++++++ +.|||+++|+.++.||++++...... ..++||+|||++++++||.++++||.+|+|+++|
T Consensus 370 -~~~i~~~-~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~-~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G 444 (545)
T PRK07768 370 -EVRVVDE-DGQVLPPR--GVGVIELRGESVTPGYLTMDGFIPAQ-DADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAG 444 (545)
T ss_pred -EEEEECC-CCCCCCCC--CEEEEEEccCcccccccCCCCCcccc-cCCCeeeccceEEEecCCEEEEEccccceEEECC
Confidence 9999995 78899988 88999999999999999865544333 3378999999999999999999999999999999
Q ss_pred eeechHHHHHHHhcCcCcceeEEEecc
Q 036361 452 ENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 452 ~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
.++++.+||+.+.++|+|.+++|++.+
T Consensus 445 ~~v~~~eiE~~l~~~~~v~~~~vv~~~ 471 (545)
T PRK07768 445 RNIYPTDIERAAARVEGVRPGNAVAVR 471 (545)
T ss_pred EecCHHHHHHHHHhCcccccceEEEEE
Confidence 999999999999999999998777654
No 118
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.6e-52 Score=405.35 Aligned_cols=353 Identities=17% Similarity=0.188 Sum_probs=306.3
Q ss_pred EEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcC
Q 036361 32 SIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSE 111 (485)
Q Consensus 32 a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (485)
++++.++++||.||.++++++|+.|. .|+++|++|+++++|+++++++++||+++|++++|+++..+.+++..+++.++
T Consensus 1 ~~~~~~~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~ 79 (414)
T PRK08308 1 MLIVNDEEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAG 79 (414)
T ss_pred CeEecCceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCC
Confidence 46778899999999999999999985 68999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccccCCCCCCCCCCCCCCCcE
Q 036361 112 SKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPM 191 (485)
Q Consensus 112 ~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (485)
+++++++..... ... .....+++++
T Consensus 80 ~~~~i~~~~~~~--------------------~~~-----------------------------------~~~~~~~~~~ 104 (414)
T PRK08308 80 CHGLLYGESDFT--------------------KLE-----------------------------------AVNYLAEEPS 104 (414)
T ss_pred CCEEEecCcccc--------------------ccc-----------------------------------CCCCCCCCce
Confidence 999998752100 000 0012456899
Q ss_pred EEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHhhcceEeecccCCHHHHHH
Q 036361 192 VLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICLRRFDASAISD 270 (485)
Q Consensus 192 ~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~ 270 (485)
+++|||||||.||+|.+||+++..++......+....+++++...|++|.+++.. ++.++..|+++++.+.+++..+++
T Consensus 105 ~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~ 184 (414)
T PRK08308 105 LLQYSSGTTGEPKLIRRSWTEIDREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALN 184 (414)
T ss_pred EEEECCCCCCCCcEEEEehHhHHHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHH
Confidence 9999999999999999999999988888888888889999999999999999854 788899999999998899999999
Q ss_pred HHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccCCCCCCC
Q 036361 271 LIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWD 350 (485)
Q Consensus 271 ~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~ 350 (485)
.++++++|.++++|+++..+.+.... ..+++.++++|+++++++.+++++.+.++++.||+||++.+.....
T Consensus 185 ~l~~~~~t~~~~~P~~~~~l~~~~~~--~~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~------ 256 (414)
T PRK08308 185 ILRNTPQHILYAVPLMLHILGRLLPG--TFQFHAVMTSGTPLPEAWFYKLRERTTYMMQQYGCSEAGCVSICPD------ 256 (414)
T ss_pred HHHHhCCeEEEcCHHHHHHHHhcCCc--cccccEEEEccCCCCHHHHHHHHHhCChhhhccCccccCCeeecCC------
Confidence 99999999999999999999876422 2368889999999999999999876789999999999985443211
Q ss_pred CCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEE
Q 036361 351 KLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAV 430 (485)
Q Consensus 351 ~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~ 430 (485)
......+|+|.+++ ++++.+. ++ +.|||++++. ++||+|||+|+
T Consensus 257 -------~~~~~~~G~p~~~~-~~~~~~~-------~~--~~gel~v~~~-------------------~~~~~TGDl~~ 300 (414)
T PRK08308 257 -------MKSHLDLGNPLPHV-SVSAGSD-------EN--APEEIVVKMG-------------------DKEIFTKDLGY 300 (414)
T ss_pred -------CCCCCccCccCCCe-EEEEecC-------CC--CCceEEEEcC-------------------CceEECCceEE
Confidence 01134789999998 8888653 12 5699999752 67999999999
Q ss_pred EecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 431 MHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 431 ~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+++||+++++||.+|+||++|++|+|.+||+++.++|+|.+|+|++.+++..|+
T Consensus 301 ~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~a~v~~~~~~~~~~ 354 (414)
T PRK08308 301 KSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQEAVVYRGKDPVAGE 354 (414)
T ss_pred ECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeEEEEEeccCCCCCc
Confidence 999999999999999999999999999999999999999999999999987775
No 119
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2.6e-44 Score=382.67 Aligned_cols=414 Identities=16% Similarity=0.147 Sum_probs=313.2
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeC---C--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYN---N--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~---~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
..|+.++|++.++++|+++|+... + +++||+|+.++++++|++|.++|+++||+|+|+++|+++|+++.+||+++
T Consensus 426 ~~Tl~dll~~~a~~~pd~~al~~~~~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~lA~~~~ 505 (1452)
T PTZ00297 426 VRSLGEMWERSVTRHSTFRCLGQTSESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILEVACALY 505 (1452)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEEeccCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 368999999999999999999742 3 68999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccc
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDT 167 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (485)
|++++|+++ +.+++.++++.++++++|++.+..+.+.++... ..+.++++++....... ... .........
T Consensus 506 GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~~-----~Lr~IIv~d~~~~~~~~-~~~-~~~~i~~~s 576 (1452)
T PTZ00297 506 GFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRSR-----KLETVVYTHSFYDEDDH-AVA-RDLNITLIP 576 (1452)
T ss_pred CCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhccc-----CCcEEEEECCCcccccc-ccc-ccCCcceee
Confidence 999999975 467899999999999999998777666554321 46778887532100000 000 000011344
Q ss_pred cccccccCCCCC-CCCCCCCCCCcEEEEe---cCCCCCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhh
Q 036361 168 YEGFVEEGDPKY-KWVRPRSEWDPMVLNY---TSGTTSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFH 240 (485)
Q Consensus 168 ~~~~~~~~~~~~-~~~~~~~~~~~~~i~~---TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~ 240 (485)
|++++..+.... ......+++|++.++| ||||||.||||++||++++.++....... ...++|++++.+|++|
T Consensus 577 ~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~~Ls~LPLaH 656 (1452)
T PTZ00297 577 YEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHLMVHFTPFAM 656 (1452)
T ss_pred HHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCEEEEechHHH
Confidence 666665543211 1122346788998885 99999999999999999999988765432 3467899999999999
Q ss_pred HhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CC--------------------
Q 036361 241 ANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DF-------------------- 296 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~-------------------- 296 (485)
.++....+.++..|+++.. +++..+++.|++++||+++++|.+|+.+.+.. ..
T Consensus 657 I~er~~~~~~l~~G~~I~~---~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~~~~ 733 (1452)
T PTZ00297 657 LFNRVFVLGLFAHGSAVAT---VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRSRLI 733 (1452)
T ss_pred HHHHHHHHHHHHcCCEEEe---CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 9997777788888988763 47899999999999999999999999876432 00
Q ss_pred --CC-----------------C-CCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHH
Q 036361 297 --EP-----------------L-KTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEE 356 (485)
Q Consensus 297 --~~-----------------l-~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~ 356 (485)
.. + ..+|.+++||+ ++.+......++++...||+||.. ..... . +.
T Consensus 734 ~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga---~~~l~~~l~~~i~i~~g~glTE~~--~~~~~-~--------~~ 799 (1452)
T PTZ00297 734 NIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVS---EESTSFSLLEHISVCYVPCLREVF--FLPSE-G--------VF 799 (1452)
T ss_pred hcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCC---ccccChHHhCCceEEEecceEEee--eecCC-C--------Cc
Confidence 00 0 35788888873 233333334467888899999953 11111 0 00
Q ss_pred HhhhhhccCccccCcceeEEecC-CCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCc
Q 036361 357 RARLKARQGVKTVGLTEVDVVNP-ETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDG 435 (485)
Q Consensus 357 ~~~~~~~~G~~~~~~~~~~i~~~-~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g 435 (485)
...|.|.+++ +++|.+. +.+.. + ..|||++++ .++++.|... . ++|+ +||
T Consensus 800 -----~~~G~Plpgv-EvKI~~~~E~~~~---~--~~GEIlvr~-------~kdpe~T~e~-~-~gW~---------~dG 850 (1452)
T PTZ00297 800 -----CVDGTPAPSL-QVDLEPFDEPSDG---A--GIGQLVLAK-------KGEPRRTLPI-A-AQWK---------RDR 850 (1452)
T ss_pred -----ccCCeecCce-EEEEcccccccCC---C--CCCeEEEEE-------CCChHHHHHh-h-CcCc---------cCC
Confidence 1239999999 9999874 22221 1 349999954 4778877763 2 5664 699
Q ss_pred eEEEEccCCceEE-eCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 436 YVEIKDRSKDVII-SGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 436 ~l~~~gR~~~~i~-~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
+|+|.||.+|+|| .+|++|.|+.||+.+..+|.|.+++|+|.+.+.
T Consensus 851 ~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~qi~V~Gd~~k~ 897 (1452)
T PTZ00297 851 TLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVNDIFLYADPSRP 897 (1452)
T ss_pred eEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccEEEEEecCCCc
Confidence 9999999999999 899999999999999999999999999987654
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-41 Score=351.21 Aligned_cols=407 Identities=20% Similarity=0.236 Sum_probs=339.2
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..++++.+.+++...|+++|+.+.+.++||+++..+++++|+.|.+.|++++++|+++.+++.++++.++|++++|+.++
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~~~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ilkaG~~yv 305 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRGGQQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLAVLKAGAAYV 305 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecCCCcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHHHHhcCCeEe
Confidence 36799999999999999999999999999999999999999999999999999999999889999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|+||..+.+++..+++.++++.+++......... .... +..+....
T Consensus 306 P~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~-~~~~~~~~----------------------- 351 (642)
T COG1020 306 PLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDV----------GLPG-LALDDALS----------------------- 351 (642)
T ss_pred cCCCCChHHHHHHHHhhcCccEEEeccccccccc----------cCCc-cccccccc-----------------------
Confidence 9999999999999999999999999732211100 0000 11111100
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.............+++.+|++|||||||.||||..+|+++.+...+....+.....|+++...++.+......++..+.
T Consensus 352 -~~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~~~~f~~l~ 430 (642)
T COG1020 352 -EIPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASVFEIFGALL 430 (642)
T ss_pred -cCCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhHHHHHHHHh
Confidence 0000000011234579999999999999999999999999987777777788999999999999988888888999999
Q ss_pred hcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhhcc--
Q 036361 253 VGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTESM-- 323 (485)
Q Consensus 253 ~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~~~-- 323 (485)
.|+++++.+. .++..+.+.+.++++|++..+|.++..+.... .......+|.+++||+.++..+...+...
T Consensus 431 ~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 510 (642)
T COG1020 431 EGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDLISPCERLRQLLSGGEALPLALVQRLLQLAA 510 (642)
T ss_pred CCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccccCCcccccEEEEcCCCCCHHHHHHHHHhcc
Confidence 9999999873 68999999999999999999999999998763 12233458999999999999999988743
Q ss_pred -CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcc
Q 036361 324 -GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCV 402 (485)
Q Consensus 324 -~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~ 402 (485)
...+.+.||.||+.............. . ....|.|..+. .+.|+| +..++++.| ..||+++.|.++
T Consensus 511 ~~~~l~~~ygpTe~~~~~~~~~~~~~~~--------~-~~piG~p~~n~-~~~ild-~~~~~~p~g--v~gel~i~g~~~ 577 (642)
T COG1020 511 LARRLLNLYGPTEATLDAPSFPISAELE--------S-RVPIGRPVANT-QLYILD-QGLRPLPLG--VPGELYIAGLGL 577 (642)
T ss_pred ccceEeeccCccHHhhheeeEEcccccC--------C-CCCcceeeCCC-eEEEEC-CCCCcCCCC--CCeeeEECCcch
Confidence 468999999999654444332111100 0 45789999997 999999 589999999 789999999999
Q ss_pred cccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCc
Q 036361 403 TVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNT 467 (485)
Q Consensus 403 ~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~ 467 (485)
.+||+++++.+..+|..+.+|+|||++++..||.+.++||.|+++|++|.+|.+.+||..+..+|
T Consensus 578 a~gy~~~p~lt~~~f~~~~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 578 ALGYLNRPDLTAERFIALRLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhcCChhhhHHHhhhccCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 99999999999999984458999999999999999999999999999999999999999998765
No 121
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.5e-39 Score=311.98 Aligned_cols=259 Identities=27% Similarity=0.429 Sum_probs=221.3
Q ss_pred CCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec---c
Q 036361 185 RSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL---R 261 (485)
Q Consensus 185 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~---~ 261 (485)
..++++++++|||||||.||+|+++|+++..+....... +...++++..+|++|..++..++.++..|++.++. .
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~--~~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~~~~~~ 109 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDR--LGGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVELDVSA 109 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhc--cCCCCeEEEECChHHHHHHHHHHHHHHcCCeEEecCcCC
Confidence 346799999999999999999999999998877665544 34557889999999999998888889999988873 3
Q ss_pred cCCHHHHHHHHHhcC--ceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccc
Q 036361 262 RFDASAISDLIQKHN--VTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAG 338 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~--~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~ 338 (485)
.+++..+++.+++++ .++...+|..+..+.... ....++++|.++++|+++++++.+++.+.++++++.||+||++.
T Consensus 110 ~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~l~~i~~gG~~l~~~~~~~~~~~~~~v~~~YG~TE~~~ 189 (358)
T PRK07824 110 GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPAATAALAELDAVLVGGGPAPAPVLDAAAAAGINVVRTYGMSETSG 189 (358)
T ss_pred CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCccccCCcccceEEEECCCCCCHHHHHHHHhcCCcEEecccCCccCC
Confidence 589999999999998 566677888887776554 23567899999999999999999998888999999999999875
Q ss_pred cccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhccccc
Q 036361 339 LVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS 418 (485)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 418 (485)
.+. ..|.|.+++ ++++.+ |||+++|+.++.||+++++.. .+.
T Consensus 190 ~~~---------------------~~G~~~~g~-~v~i~~--------------Gei~v~g~~~~~gY~~~~~~~--~~~ 231 (358)
T PRK07824 190 GCV---------------------YDGVPLDGV-RVRVED--------------GRIALGGPTLAKGYRNPVDPD--PFA 231 (358)
T ss_pred CcC---------------------cCceeCCCC-EEEecC--------------CEEEEecCccccccCCCcccc--ccc
Confidence 432 247788887 888722 899999999999999987643 344
Q ss_pred CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 419 DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 419 ~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.++||+|||+|++ ++|.+++.||.+|+||++|++|+|.+||++|.++|+|.+|+|++.+++..|+
T Consensus 232 ~~g~~~TGDl~~~-~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~~~vv~~~~~~~g~ 296 (358)
T PRK07824 232 EPGWFRTDDLGAL-DDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVADCAVFGLPDDRLGQ 296 (358)
T ss_pred CCCceecccEEEE-eCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEecCCCCCce
Confidence 4789999999999 7999999999999999999999999999999999999999999999988776
No 122
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=100.00 E-value=1.5e-31 Score=262.93 Aligned_cols=448 Identities=16% Similarity=0.185 Sum_probs=318.0
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhc
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPM 86 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~ 86 (485)
.++.++|+++++.+||++|+..-+ .++||++|..+|.+++..|++ .-+++||.|++++++++|++++++||+.
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~Cly 849 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYACLY 849 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHHHHh
Confidence 789999999999999999998743 689999999999999999998 5789999999999999999999999999
Q ss_pred cCceEEecCCCCC------HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCC-CeEEEecCCcccccCccCCCc
Q 036361 87 SGAILNNINTRLD------AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKR-PHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 87 ~G~~~v~l~~~~~------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~ 159 (485)
+|.+++|+.|... ...+..+++.++++.|++++.....+............. +.++..++...
T Consensus 850 ~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~---------- 919 (1363)
T KOG3628|consen 850 LGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPE---------- 919 (1363)
T ss_pred cCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccch----------
Confidence 9999999987753 346788999999999999987666544321111100001 11111111100
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchh
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMF 239 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 239 (485)
.......++.+ ...........++.+|++-+.--++|.--++.++|.++++.++.......+.++.-++...+.+
T Consensus 920 ---t~~k~~~~~~k--~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~ 994 (1363)
T KOG3628|consen 920 ---TIRKRKKNIKK--LNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPY 994 (1363)
T ss_pred ---hhhhhhhhhhc--cCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCc
Confidence 00000000000 0111112234567899999988899999999999999999999999999988888888888888
Q ss_pred hHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCC-----CCceEEe
Q 036361 240 HANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLK-----TPVQILT 307 (485)
Q Consensus 240 ~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~-----~lr~i~~ 307 (485)
.+.|+.. ++...+.|...++.++ -+|..++..|+++++.-++.+-+.++.+.+.. +...++ ....+++
T Consensus 995 sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~s~vv 1074 (1363)
T KOG3628|consen 995 SGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSSSIVV 1074 (1363)
T ss_pred cchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhcccccceee
Confidence 8888764 7778888988777764 47999999999999999999999999988765 111111 1113343
Q ss_pred ccC-CCChhhhhhhhc----cCC---eeeeccCCccccccccccCCCCCCCCCChHHHhhhh----------------hc
Q 036361 308 AGA-PPPAPVLSRTES----MGF---VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLK----------------AR 363 (485)
Q Consensus 308 ~g~-~l~~~~~~~~~~----~~~---~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~ 363 (485)
-.+ .....+.+.+.+ ++. .+...|++.=...++......+.......+....+. ..
T Consensus 1075 ~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~d 1154 (1363)
T KOG3628|consen 1075 PAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYD 1154 (1363)
T ss_pred ecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCcccccc
Confidence 333 333444444443 232 366667766555444442222211111111111111 12
Q ss_pred cCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChh-hhcccc---------cCCCeeecCceEEEec
Q 036361 364 QGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKE-STRRCI---------SDNGWFYTGDIAVMHV 433 (485)
Q Consensus 364 ~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~-~~~~~~---------~~~~~~~TGD~~~~~~ 433 (485)
.|..++++ ++.|++||+..+|.+| +.||||+.+.+-+.+|+...+ .....| ...+|-||||+|+...
T Consensus 1155 SG~~~~~~-~i~IvnPEtk~pc~dg--e~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~ 1231 (1363)
T KOG3628|consen 1155 SGKLPVYT-DIAIVNPETKGPCRDG--ELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRR 1231 (1363)
T ss_pred CCcccccc-eeEEeCCccccccccC--CcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeee
Confidence 26677777 9999999999999999 899999999988887765321 111111 1135999999999842
Q ss_pred ------C----ceEEEEccCCceEEeCCeeechHHHHHHHhc-CcCcceeEEEeccC
Q 036361 434 ------D----GYVEIKDRSKDVIISGGENICSAEVESVLYS-NTAVNEAAVVARPD 479 (485)
Q Consensus 434 ------~----g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~-~~~v~~~~v~~~~~ 479 (485)
+ .-||++|-.++.+.++|.+++|.+||..+.+ ||.|.+|+|+.+..
T Consensus 1232 t~~t~~~~e~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~~cavF~~~g 1288 (1363)
T KOG3628|consen 1232 TSLTDANVERHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIGGCAVFQATG 1288 (1363)
T ss_pred eecccccceeeeeEEEeecccceeeecCcccCcchHHHHHHHhcccccceeeEeeCC
Confidence 2 3499999999999999999999999999986 89999999987653
No 123
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=100.00 E-value=2.1e-32 Score=260.81 Aligned_cols=232 Identities=22% Similarity=0.198 Sum_probs=185.0
Q ss_pred CCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCC--CCEEEEecchhhHhHHHH-HHHHHhhcceEeecccCC
Q 036361 188 WDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPK--QPVYLWTLPMFHANGWGY-TWGMAAVGATNICLRRFD 264 (485)
Q Consensus 188 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~~~ 264 (485)
+..++++|||||||.||+|++||+++..++......++... .+++++.+|++|.+|+.. ++.++..|+++++.+.++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~~~ 174 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAAAP 174 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCCCC
Confidence 46889999999999999999999999988887777776643 468999999999988754 677888899999988899
Q ss_pred HHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCC-eeeeccCCcccccccccc
Q 036361 265 ASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGF-VVCHGYGLTETAGLVVSC 343 (485)
Q Consensus 265 ~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~-~i~~~Yg~tE~~~~~~~~ 343 (485)
+..+++.++.+ |++.++|++++.+.+.. ..+++++. +++|+++++++.+.+++.+. .+++.||+||++++++..
T Consensus 175 ~~~~l~~i~~~--t~~~~~P~~l~~l~~~~--~~l~slr~-i~gGa~l~~~l~~~~~~~g~~~v~~~YG~TEt~~i~~~~ 249 (386)
T TIGR02372 175 ASGIMRHARPG--DLIVGTPFIWEQLADLD--YRLPGVVG-VSSGAPSTAATWRCLLAAGLARLLEVYGATETGGIGLRE 249 (386)
T ss_pred hHHHHHhhccC--CEEEECcHHHHHHHhhC--cCCCccee-EecCCCCCHHHHHHHHHhcccchhheecccccccccccc
Confidence 98888888754 89999999999997653 34667775 67899999999999987664 699999999998765432
Q ss_pred CCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCee
Q 036361 344 SWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWF 423 (485)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~ 423 (485)
. +...|.+.++. ++.+ +++. + .|+ ..|+
T Consensus 250 ~----------------~~~~~~~~p~~-~~~~---~~~~----------~---~g~-------------------~~~~ 277 (386)
T TIGR02372 250 A----------------PDDPFRLLPDL-ACFA---DTLS----------S---AGL-------------------ARRL 277 (386)
T ss_pred C----------------CCCCcccCCCc-cccC---CCcc----------C---CCc-------------------ccee
Confidence 1 01234444443 3221 1110 0 011 2368
Q ss_pred ecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEe
Q 036361 424 YTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVA 476 (485)
Q Consensus 424 ~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~ 476 (485)
+|||+|++|++|+|+++||.+|+||++|++|+|.+||++|.++|+|.+|+|..
T Consensus 278 ~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~~~v~~ 330 (386)
T TIGR02372 278 DLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRAAAVRL 330 (386)
T ss_pred ecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceEEEEEc
Confidence 99999999999999999999999999999999999999999999999998864
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=100.00 E-value=2.1e-32 Score=267.68 Aligned_cols=259 Identities=17% Similarity=0.213 Sum_probs=199.7
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHH---HHHhCCCCCCEEEEecchhhHh-HHHHHHHHHhhcceEeecc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANA---LIDWAVPKQPVYLWTLPMFHAN-GWGYTWGMAAVGATNICLR 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~-g~~~~~~~l~~G~~~~~~~ 261 (485)
+.++++.+++||||||.||++.++|.++..+.... ...+++.++|++++..+..+.. ++...+.+...|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 34578899999999999999999999987654333 3345788899988776654332 2333455677888888877
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC----CCCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccc
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF----EPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTET 336 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~ 336 (485)
..++..+++.|+++++|++.++|+++..|++.... ....++|.++++|+++++++.+.+. .+++++++.||+||+
T Consensus 153 ~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~~~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~ 232 (422)
T TIGR02155 153 GGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPAQTSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEV 232 (422)
T ss_pred CCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcccCceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhh
Confidence 77789999999999999999999999988765311 1235899999999999999999988 569999999999998
Q ss_pred cc--cccccCCCCCCCCCChHHHhhhhhccCcccc--CcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhh
Q 036361 337 AG--LVVSCSWKPEWDKLPLEERARLKARQGVKTV--GLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKES 412 (485)
Q Consensus 337 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~--~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~ 412 (485)
++ +...|... ..|.+.. .. .++|+|+++++++++| +.|||++++.
T Consensus 233 ~~~~~~~~~~~~----------------~~g~~~~~~~~-~~eivd~~~g~~v~~G--e~Gelvvt~~------------ 281 (422)
T TIGR02155 233 IGPGVAMECVET----------------QDGLHIWEDHF-YPEIIDPHTGEVLPDG--EEGELVFTTL------------ 281 (422)
T ss_pred cCCceeeccccc----------------CCCceEecCee-EEEEECCCCCCCCCCC--CeeEEEEecC------------
Confidence 53 22222100 1122222 23 7789998889999999 8899999973
Q ss_pred hcccccCCCeeecCceEEEecC-c-----eEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEe
Q 036361 413 TRRCISDNGWFYTGDIAVMHVD-G-----YVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVA 476 (485)
Q Consensus 413 ~~~~~~~~~~~~TGD~~~~~~~-g-----~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~ 476 (485)
+...++ .+||+|||+++++++ | .+++.||.+|+|+++|.+|+|.+||.+|.++|+|...+.+.
T Consensus 282 ~~~~~p-~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~~q~~ 350 (422)
T TIGR02155 282 TKEALP-VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPHYQLE 350 (422)
T ss_pred Cccccc-eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCCEEEE
Confidence 223333 679999999999875 4 46899999999999999999999999999999998444333
No 125
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.96 E-value=2.4e-27 Score=209.37 Aligned_cols=218 Identities=11% Similarity=0.063 Sum_probs=162.8
Q ss_pred HHHHHhhcCCCcEEEeC-C-----eeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 20 LERAATAYSDCPSIVYN-N-----TTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 20 l~~~a~~~p~~~a~~~~-~-----~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
|..+++.+|+++|+++. + .++||+||.++++++|+.|++ .|+++||+|+++++|++++++++|||+++|++++
T Consensus 2 ~~~~~~~~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~v~v 81 (227)
T TIGR03089 2 LSPLLAADPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGVEVV 81 (227)
T ss_pred hhhhhhhCCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEE
Confidence 56788899999999752 2 369999999999999999998 7999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|++ .+++++++++++..+.+. . . ..++.+............ .......+....
T Consensus 82 p~n-------------~s~a~~~v~~~~~~~~~~-----~----~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 134 (227)
T TIGR03089 82 LAG-------------DPDADVVVTGPDRLAAAA-----G----S-GEVVALSLDPLGRRVAGE----LPPGVIDFAPEV 134 (227)
T ss_pred eCC-------------CCCCCEEEeCcchhhhcc-----c----C-CceEEEeccccccCCCCC----CCCcccchhhhh
Confidence 995 578999999987665532 0 1 223333211000000000 001122344333
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHH
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMA 251 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l 251 (485)
........+.....++|+++++||||+ +|++++.+. ...+++++|+++ ..|++|.+|+.. ++.++
T Consensus 135 ~~~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 135 RVHGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred hccCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 322222221213456899999999975 666665554 456789999999 999999999865 88999
Q ss_pred hhcceEeecccCCHHHHHHHHHhcCce
Q 036361 252 AVGATNICLRRFDASAISDLIQKHNVT 278 (485)
Q Consensus 252 ~~G~~~~~~~~~~~~~~~~~i~~~~~t 278 (485)
..|+++++.++|++..+++.|+++|||
T Consensus 201 ~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 999999999999999999999999997
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.96 E-value=2.8e-27 Score=231.53 Aligned_cols=253 Identities=17% Similarity=0.149 Sum_probs=186.7
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHH-HHHHHhhcceEeecc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICLR 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~ 261 (485)
+.++++.+.+||||||.||++.+||+.+.......... .++.++|+++...+..+..+... .+++...|++++...
T Consensus 84 ~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~ 163 (445)
T TIGR03335 84 DWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEG 163 (445)
T ss_pred CHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCC
Confidence 34578899999999999999999999988766554443 47889999999988877655443 455667777765433
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCC----CCCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccc
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDF----EPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTET 336 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~----~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~ 336 (485)
. ....++.|+++++|.+.++|+.+..|.+.... ....++|.++++|+++++++.+.+. .+++++++.||+||+
T Consensus 164 ~--~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~~~~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~ 241 (445)
T TIGR03335 164 K--CTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDPAESSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEG 241 (445)
T ss_pred c--hhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhh
Confidence 2 34568999999999999999988777654311 1236899999999999999988887 569999999999998
Q ss_pred cccccccCCCCCCCCCChHHHhhhhhccCccc--cCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhc
Q 036361 337 AGLVVSCSWKPEWDKLPLEERARLKARQGVKT--VGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTR 414 (485)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~--~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~ 414 (485)
+ ++..|... .|... ... .++|+|++++.++++| +.|||++++-... .....
T Consensus 242 ~-~~~~c~~~-----------------~g~h~~~d~~-~vEIvDp~~~~~vp~G--e~GELvvT~L~~~------~~r~~ 294 (445)
T TIGR03335 242 T-MCGECQAV-----------------AGLHVPEDLV-HLDVYDPRHQRFLPDG--ECGRIVLTTLLKP------GERCG 294 (445)
T ss_pred h-heEEecCC-----------------CCccccCCce-EEEEEcCCCCCCCcCC--CceEEEEEecCCC------CccCC
Confidence 5 33343211 12222 223 7899999888889999 8899999883210 00001
Q ss_pred ccccCCCeeecCceEEEec-C----c----eEEEEccCCceEEeCCeeechHHHHHHHhcC---cCcc
Q 036361 415 RCISDNGWFYTGDIAVMHV-D----G----YVEIKDRSKDVIISGGENICSAEVESVLYSN---TAVN 470 (485)
Q Consensus 415 ~~~~~~~~~~TGD~~~~~~-~----g----~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~---~~v~ 470 (485)
.++. .|+|||++++.. + | ++...||.+||++++|.+++|.+||++|.++ +++.
T Consensus 295 ~Pli---RYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~~~~~ 359 (445)
T TIGR03335 295 SLLI---NYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENMDSLT 359 (445)
T ss_pred ceEE---EeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCCCCCC
Confidence 1111 599999999732 2 2 2455799999999999999999999999984 5554
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.94 E-value=1.3e-25 Score=228.30 Aligned_cols=440 Identities=16% Similarity=0.135 Sum_probs=275.7
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhh
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVP 85 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~ 85 (485)
-+++..+.+.+...|..++..+-- .++||++.+..++.+++.|...|...|+.|++++..+.++++..++.+
T Consensus 36 g~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~~~ 115 (1032)
T KOG1178|consen 36 GTLEDSFRRELAEAPENTGHVIIPTASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFAVL 115 (1032)
T ss_pred cchhhHHHHHHhhcccCCCceEeecccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeeehh
Confidence 356677888888999988776521 689999999999999999999999999999999999999999999999
Q ss_pred ccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 86 MSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
+.|..+++++|.++..++...+.+...-..-+..+....+.-....+........+....+
T Consensus 116 ~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l~i~~~~~~~~~~~~sv~~~~~------------------- 176 (1032)
T KOG1178|consen 116 AAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRLNIIDILLNSLFPKLSVETIAD------------------- 176 (1032)
T ss_pred hcceEEEEecCCCcccccchHHHhhhhhheeccceehhhhhhHHHHhhccccccchhhccc-------------------
Confidence 9999999999999921222212121111111111211111111111000000111111100
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
.+.. ..... ........-.|..+++.||||+||.||+|..+|..++....++...+..+..+++-.....+...-..
T Consensus 177 -~f~~-~~~~~-~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~ 253 (1032)
T KOG1178|consen 177 -SFQM-VLHNE-DTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQ 253 (1032)
T ss_pred -hhhh-hhccC-CCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchH
Confidence 0000 00000 00011123456789999999999999999999999999888888888887777652222232222233
Q ss_pred HHHHHH-hhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCC---------------CCCCCCCceEE
Q 036361 246 YTWGMA-AVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPD---------------FEPLKTPVQIL 306 (485)
Q Consensus 246 ~~~~~l-~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~---------------~~~l~~lr~i~ 306 (485)
..+.++ ..|+.++.+.. -++.++.+.+++++++..+.+|++.++++.... ....+.++...
T Consensus 254 ~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~ 333 (1032)
T KOG1178|consen 254 KFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVV 333 (1032)
T ss_pred HHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeee
Confidence 334444 44554555433 247899999999999999999999888776541 12234789999
Q ss_pred eccCCCChhhhhhhhc-c-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcc------eeEEec
Q 036361 307 TAGAPPPAPVLSRTES-M-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLT------EVDVVN 378 (485)
Q Consensus 307 ~~g~~l~~~~~~~~~~-~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~------~~~i~~ 378 (485)
.+|++....+...+.. + -.-+..-|+.++..+......+.+....+.. ..++.++.... ...+..
T Consensus 334 ~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~~-------~~v~~~p~~~~~~~~~~~~~~~~ 406 (1032)
T KOG1178|consen 334 LGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYDDFSPSKVLLTN-------ENVYSVPKFDSIIGSLTVLESLY 406 (1032)
T ss_pred ecCCccchhhhhhhhhcccceeeeecccCCCCccceeHHhhCcccceecc-------eeEEeccchhhccCCCcceeeee
Confidence 9999999888875543 2 2222333888887766555433222111111 11111111110 111111
Q ss_pred CCCCCcccCCC--ceecEEEEecCcccccccCChhhhccc-ccC----CCeeecCceEEEecCceEEEEccCCceEEeCC
Q 036361 379 PETGESVKRDG--VSLGEVVLRGGCVTVGYFKDKESTRRC-ISD----NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGG 451 (485)
Q Consensus 379 ~~~~~~~~~g~--~~~Gel~v~~~~~~~gy~~~~~~~~~~-~~~----~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G 451 (485)
..+.+.+.+. .+.|+-+..+..+..|| ..++..... ... +..|+|||+|+..++|.+.+.||.+++||.+|
T Consensus 407 -~~~~~~~~~v~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG 484 (1032)
T KOG1178|consen 407 -RAGGEGEGGVGKGCLGAEQNLSSWVVDGY-STPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRG 484 (1032)
T ss_pred -ccCcccCCcccceeecccccccceeeccc-cchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEcc
Confidence 1333333320 01122222223333442 223322111 111 34799999999999999999999999999999
Q ss_pred eeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 452 ENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 452 ~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.++...+|+.++..+|.|+++.+.+..+...||
T Consensus 485 ~Ri~L~ei~t~v~~~p~v~~~itl~~~~~~~~~ 517 (1032)
T KOG1178|consen 485 VRIELGELNTVVEVHPDVKEAITLARENSTVGQ 517 (1032)
T ss_pred EEEehhhhchhhccCcchhhhheeeeeccccCc
Confidence 999999999999999999999999999988665
No 128
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.92 E-value=2.2e-23 Score=193.46 Aligned_cols=252 Identities=23% Similarity=0.260 Sum_probs=194.6
Q ss_pred CCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEecchh-hHhHHHHHHHHHhhcceEeecccC
Q 036361 188 WDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTLPMF-HANGWGYTWGMAAVGATNICLRRF 263 (485)
Q Consensus 188 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~-~~~g~~~~~~~l~~G~~~~~~~~~ 263 (485)
++...+-.||||||+|+.+.+++..+...+..+.+.+ +...+|++....... +..|+..-.++--.|++++-...-
T Consensus 90 ~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g 169 (438)
T COG1541 90 EEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG 169 (438)
T ss_pred cceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc
Confidence 4566678899999999999999999887776666654 677888877666532 112222333444466666655555
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHhCCCCCC----CCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccc
Q 036361 264 DASAISDLIQKHNVTHMCGAPVVLNMISNSPDFE----PLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAG 338 (485)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~----~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~ 338 (485)
+...-+++++.+++|++.++|+++..|.+..+.. .-.++|.+++|+|+++++.++.+. .+|+..++.||.||..+
T Consensus 170 ~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g 249 (438)
T COG1541 170 NTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFG 249 (438)
T ss_pred cHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccC
Confidence 7889999999999999999999999998877322 335899999999999999999999 77999999999999977
Q ss_pred cc-cccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccc
Q 036361 339 LV-VSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCI 417 (485)
Q Consensus 339 ~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~ 417 (485)
.. ..|......+.+. .. ..+.|+||++++.+++| +.|||+++.= ++..+
T Consensus 250 ~g~~eC~~~~glhi~e---------------D~-~~~Ei~dP~t~e~l~dg--e~GelV~T~L------------~~~~~ 299 (438)
T COG1541 250 PGAGECTERNGLHIWE---------------DH-FIFEIVDPETGEQLPDG--ERGELVITTL------------TKEGM 299 (438)
T ss_pred CcccccccccCCCcch---------------hh-ceeeeecCCcCccCCCC--CeeEEEEEec------------cccCc
Confidence 63 5554333222111 12 28899999999999999 8899999872 22211
Q ss_pred cCCCeeecCceEEEecC----ce-----EEEEccCCceEEeCCeeechHHHHHHHhcCcCcc
Q 036361 418 SDNGWFYTGDIAVMHVD----GY-----VEIKDRSKDVIISGGENICSAEVESVLYSNTAVN 470 (485)
Q Consensus 418 ~~~~~~~TGD~~~~~~~----g~-----l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~ 470 (485)
+ --.|+|||++.+.++ |+ -.+.||.+|+++++|.+|+|..||.+|.+.+.+.
T Consensus 300 P-lIRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~~~ 360 (438)
T COG1541 300 P-LIRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPEVT 360 (438)
T ss_pred c-eEEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccCCC
Confidence 1 125999999999763 32 5699999999999999999999999999999998
No 129
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.84 E-value=5.8e-20 Score=182.10 Aligned_cols=434 Identities=14% Similarity=0.099 Sum_probs=293.8
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCC-----eeeeHHHHHHHHHHHHH-HHHHcCCCCCCEEEEEcCCc--hhHHHHHHhh
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNN-----TTYTWSETHRRCLQVAS-SLSSVGIQRGHVVSVVAPNV--PSMYELQFGV 84 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~-----~~~Ty~~l~~~~~~lA~-~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~ 84 (485)
-..+..+++++-.+++..+|.+.-+ ..+||..+..++.+.|+ .|.+-|+.++|+|.++...+ .++++..++|
T Consensus 93 ~~d~~avl~~~~nhs~~~ta~i~id~kgk~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~isl~gc 172 (1363)
T KOG3628|consen 93 LTDIIAVLRYRRNHSATSTAHICIDKKGKATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLISLFGC 172 (1363)
T ss_pred hcchHHHHHhhccCCCCCceEEEEcCCCceeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhhhccc
Confidence 3446677888889999999998744 68999999999999999 66668999999999998876 7999999999
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDF 164 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 164 (485)
..+|...+|+.+..+.+++..+++..+.++++................. ..+.+ .
T Consensus 173 ~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s----~~k~v---------------------~ 227 (1363)
T KOG3628|consen 173 FLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSPVS----LAKAV---------------------A 227 (1363)
T ss_pred cccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCccc----HHHHH---------------------H
Confidence 9999999999999999999999999999999987654443322110000 00000 0
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH--------------------Hh
Q 036361 165 IDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI--------------------DW 224 (485)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~--------------------~~ 224 (485)
++-..++.....-+....+..... ..+|-||.+++|.--+++++|. +..+.+.+.. .+
T Consensus 228 ~w~t~~~k~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~ 305 (1363)
T KOG3628|consen 228 WWKTNDFKGNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVF 305 (1363)
T ss_pred hhhcccccceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhcc
Confidence 000011110000001111122233 7899999999999999999988 4433332221 12
Q ss_pred CCCCCCEEEEecchhhHhHHHH-HHHHHhhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC------
Q 036361 225 AVPKQPVYLWTLPMFHANGWGY-TWGMAAVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP------ 294 (485)
Q Consensus 225 ~~~~~~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~------ 294 (485)
+...+++++.........|+.. ++.+++.|.|.+.+++ +.|..+...+.++|++++..-...+......-
T Consensus 306 ~~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a 385 (1363)
T KOG3628|consen 306 PVPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKA 385 (1363)
T ss_pred ccCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCCccc
Confidence 3455677777777777777766 7889999999999986 68899999999999999987655554443221
Q ss_pred -------CCCCCCCCceEEeccCCCChhhhhhh----hc-cCC-----eeeec-------------cCCccccccccccC
Q 036361 295 -------DFEPLKTPVQILTAGAPPPAPVLSRT----ES-MGF-----VVCHG-------------YGLTETAGLVVSCS 344 (485)
Q Consensus 295 -------~~~~l~~lr~i~~~g~~l~~~~~~~~----~~-~~~-----~i~~~-------------Yg~tE~~~~~~~~~ 344 (485)
...+++++|.+.+....+..+..+.. .+ .|. ..+.. =++.|.+......+
T Consensus 386 ~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p 465 (1363)
T KOG3628|consen 386 TLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRP 465 (1363)
T ss_pred ccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcceeechhhhhhhcCceEEEeccchhhhcccccCc
Confidence 23568899999999998887754433 22 221 11222 22234433322222
Q ss_pred CCCC----CCC--------------CC-hHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccc
Q 036361 345 WKPE----WDK--------------LP-LEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 405 (485)
Q Consensus 345 ~~~~----~~~--------------~~-~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~g 405 (485)
.... .+. .. .+-...-...+|...++...+.++++++.+.|.++ ++|||||.++++..+
T Consensus 466 ~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~~LC~~~--eVGEIwVsS~~~~~~ 543 (1363)
T KOG3628|consen 466 EQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTNQLCKTD--EVGEIWVSSNSLGKL 543 (1363)
T ss_pred ccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcccccccC--cceeEEEecCCcccc
Confidence 1000 000 00 00011112234666666558899999999999999 999999999999999
Q ss_pred ccCChhhhcccccC------------CCeeecCceEEEecCceEEEEccCCceEE-eCCeeechHH----------HHHH
Q 036361 406 YFKDKESTRRCISD------------NGWFYTGDIAVMHVDGYVEIKDRSKDVII-SGGENICSAE----------VESV 462 (485)
Q Consensus 406 y~~~~~~~~~~~~~------------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~-~~G~~i~~~~----------ie~~ 462 (485)
|+.-+..+...|.. ..|.|||-+|+++ +|.++|+|-.+|++. +.|-.++..+ |+.+
T Consensus 544 ~~al~~~t~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~-~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV 622 (1363)
T KOG3628|consen 544 FYALDKQTENTFKATPVESSGKPPSNVPFMRTGLLGFVH-NGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTV 622 (1363)
T ss_pred eeeccccccceEEeeeccccCCCCccchhhhhcceeeee-CCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHH
Confidence 99766655554411 2389999999997 677888887777776 7776655544 4556
Q ss_pred HhcCcCcceeEEEe
Q 036361 463 LYSNTAVNEAAVVA 476 (485)
Q Consensus 463 l~~~~~v~~~~v~~ 476 (485)
++..+.|.++.++-
T Consensus 623 ~R~v~~VF~~saf~ 636 (1363)
T KOG3628|consen 623 MRGVIAVFDVSAFE 636 (1363)
T ss_pred HhccceEEEEeeee
Confidence 66778888887765
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.68 E-value=3.4e-15 Score=142.95 Aligned_cols=242 Identities=14% Similarity=0.108 Sum_probs=154.9
Q ss_pred CcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEec-chhhHhHHHHHHHHHhhcce-Eeecc-c
Q 036361 189 DPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTL-PMFHANGWGYTWGMAAVGAT-NICLR-R 262 (485)
Q Consensus 189 ~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~-p~~~~~g~~~~~~~l~~G~~-~~~~~-~ 262 (485)
.-..+..||||||.|-.+..+..............+ ++..++++.... .-.+.+ ..+..... +..++ .
T Consensus 100 ~~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~~ly------~~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 100 GNISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADNNLY------QSVNNRWISLDFFDLL 173 (430)
T ss_pred CcEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccChhHH------HHHHhccceeeecCCC
Confidence 345677899999999999999887754433332222 344444444332 111111 11111111 12222 1
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCC-CCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCccccccc
Q 036361 263 FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPL-KTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTETAGLV 340 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l-~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE~~~~~ 340 (485)
.+....++.|++++|+.+.++|+.+..|++......+ ..++.++++||.+++...+.+. .+|+++++.||+|| |.++
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~la 252 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFLA 252 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hheE
Confidence 4678899999999999999999999999876522222 4789999999999999998888 67999999999999 6666
Q ss_pred cccCCCCCCCCCChHHHhhhhhccCccccCcceeE--EecCCCCCcccCCCceecEEEEecCcccccccCChhhhccccc
Q 036361 341 VSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVD--VVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS 418 (485)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~--i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 418 (485)
..|... ..+.. ....-++ ++|++ ++ +..++++ +.+ ...++.
T Consensus 253 ~eC~~g-~lHl~----------------ed~~~vE~~ivD~~-~~---------~~~ViT~------L~n----~~~PlI 295 (430)
T TIGR02304 253 STCRCG-TLHLN----------------EDLVHIEKQYLDEH-KR---------FVPIITD------FTR----TTQPIV 295 (430)
T ss_pred EecCCC-CEEEc----------------cccEEEEeeEECCC-Cc---------eEEEEec------CCC----ccceEE
Confidence 666321 11111 1111333 67753 22 3345554 111 111111
Q ss_pred CCCeeecCceEEEecC----ce----E-EEEccCCceEEe---CC--eeechHHHHHHHh-cCcCcceeEEEec
Q 036361 419 DNGWFYTGDIAVMHVD----GY----V-EIKDRSKDVIIS---GG--ENICSAEVESVLY-SNTAVNEAAVVAR 477 (485)
Q Consensus 419 ~~~~~~TGD~~~~~~~----g~----l-~~~gR~~~~i~~---~G--~~i~~~~ie~~l~-~~~~v~~~~v~~~ 477 (485)
.|+|||++.+.++ |. + .+.||.+|++++ +| ..++|..++.++. ..++|.+..++-.
T Consensus 296 ---RYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~~~~~i~~yQi~Q~ 366 (430)
T TIGR02304 296 ---RYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILFTLPLIVEYRVLQT 366 (430)
T ss_pred ---eeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHhcCCCCceEEEEEc
Confidence 5999999988544 32 4 389999999985 34 4569999988854 5789988877654
No 131
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.34 E-value=1.9e-12 Score=121.21 Aligned_cols=61 Identities=23% Similarity=0.272 Sum_probs=57.2
Q ss_pred CCCeeecCceEEE-ecCceEEEEccCCceEEeCC---eeechHHHHHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 419 DNGWFYTGDIAVM-HVDGYVEIKDRSKDVIISGG---ENICSAEVESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 419 ~~~~~~TGD~~~~-~~~g~l~~~gR~~~~i~~~G---~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
.+|||+|||+|++ |+||+|+|.||.+ +| ++|+|. ||++|.+||+|.+|+|++.+++.+||+
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~eaaVvgvpd~~~ge~ 271 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSDVAIALFSLPAKGVG 271 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccEEEEEEEEcCCCCeE
Confidence 3899999999998 6999999999997 78 799999 999999999999999999999999873
No 132
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.97 E-value=7.9e-08 Score=90.40 Aligned_cols=232 Identities=18% Similarity=0.196 Sum_probs=135.8
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---C-CCC-CCEEEEecchhhHh-HH----HHHHHHHhhcce
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---A-VPK-QPVYLWTLPMFHAN-GW----GYTWGMAAVGAT 256 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~-~~~-~~~~~~~~p~~~~~-g~----~~~~~~l~~G~~ 256 (485)
++++..++.||||||.|--+.+.+..+..+...+...+ . ... .-.++...|..... .+ ...+.....+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 44677889999999998667776666555443333332 2 222 22333333432111 11 112223333444
Q ss_pred Eeecc--cCCHHHHHHHHH----hcCceeeecchHHHHHHhCCC----CCCCCC-CCceEEecc------CCCCh-hhhh
Q 036361 257 NICLR--RFDASAISDLIQ----KHNVTHMCGAPVVLNMISNSP----DFEPLK-TPVQILTAG------APPPA-PVLS 318 (485)
Q Consensus 257 ~~~~~--~~~~~~~~~~i~----~~~~t~~~~~p~~~~~l~~~~----~~~~l~-~lr~i~~~g------~~l~~-~~~~ 318 (485)
.+.. .++...++..+. ..++..+++.|.++-.++... ....++ ..+.+-.|| +.+++ +..+
T Consensus 168 -~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~L~~~s~vi~~GGwK~~~~e~v~r~ef~~ 246 (365)
T PF04443_consen 168 -FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFRLPKGSIVIHGGGWKGRRKEAVSREEFYA 246 (365)
T ss_pred -eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCcccCCCCCEEEeCCCCCccccCccCHHHHHH
Confidence 3333 367776666664 567888999888666555433 223343 334444554 24544 3444
Q ss_pred hhhc-cCC----eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceec
Q 036361 319 RTES-MGF----VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLG 393 (485)
Q Consensus 319 ~~~~-~~~----~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~G 393 (485)
.+.+ +|+ .+++.||+||.......+..... -.|. .+.|.|+++..+++.| +.|
T Consensus 247 ~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~~~~----------------~~p~----wV~iRDp~tl~~~~~G--e~G 304 (365)
T PF04443_consen 247 RLQEVFGVIPIENIYDMYGMTELNSQAYECGHGHF----------------HVPP----WVIIRDPETLEPLPPG--ETG 304 (365)
T ss_pred HHHHHHCCCCHHHeeeeeeccccchhheeCCCCcc----------------cCCC----eEEEECCCCCcCCCCC--Cee
Confidence 4443 677 69999999998766555421110 1111 4677799999999999 889
Q ss_pred EEEEecCcccccccCChhhhcccccCCCeeecCceEEEecC--------ceEEEEccCCceEEeCCeeech
Q 036361 394 EVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVD--------GYVEIKDRSKDVIISGGENICS 456 (485)
Q Consensus 394 el~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~--------g~l~~~gR~~~~i~~~G~~i~~ 456 (485)
-|-+-++... .| .+..-|.|+|.+..+ ..+.++||.+. -.++|.....
T Consensus 305 li~vidl~~~-s~-------------p~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~-ae~RGCs~~~ 360 (365)
T PF04443_consen 305 LIQVIDLANT-SY-------------PGFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG-AEIRGCSLTF 360 (365)
T ss_pred EEEEEccccc-CC-------------CcEEEEcceeeecCCCCCCCccCCEEEEEeCCCC-CccCCcHHHH
Confidence 9988765321 11 334679999988654 26999999873 2367765433
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=98.20 E-value=3.5e-05 Score=77.01 Aligned_cols=144 Identities=15% Similarity=0.200 Sum_probs=78.1
Q ss_pred CCCCceEEeccCCCChhhhhhhhcc--CC-eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeE
Q 036361 299 LKTPVQILTAGAPPPAPVLSRTESM--GF-VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVD 375 (485)
Q Consensus 299 l~~lr~i~~~g~~l~~~~~~~~~~~--~~-~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 375 (485)
.++++.+.+.+..-...-...+++. +. .+...|++||. .+.+...... ..+...++..-.+
T Consensus 266 WP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg-~i~i~~~~~~---------------~~~~l~~~~~ffE 329 (528)
T PF03321_consen 266 WPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEG-FIGIPLDPED---------------PGYVLAPDSGFFE 329 (528)
T ss_dssp STT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTE-EEEEES-CCC-----------------EEE-TTSSEEE
T ss_pred CCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccce-EEEEecCCCC---------------CceEeecCCeEEE
Confidence 4688876665554444455555533 33 45678999996 3444321100 1112222222222
Q ss_pred EecCCC--------CC-----cccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEec--Cc--eEE
Q 036361 376 VVNPET--------GE-----SVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHV--DG--YVE 438 (485)
Q Consensus 376 i~~~~~--------~~-----~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~--~g--~l~ 438 (485)
-++.++ .+ ++..| +.-||+++.. .|.| .|+.||++++.. ++ .+.
T Consensus 330 Fip~~~~~~~~~~~~~~l~~~ele~G--~~YelviTt~---~GLy--------------RY~iGDvVrv~gf~~~~P~i~ 390 (528)
T PF03321_consen 330 FIPVDEDEQNPSEQPKTLLLHELEVG--EEYELVITTN---SGLY--------------RYRIGDVVRVTGFYNQTPRIE 390 (528)
T ss_dssp EEE-STT-------SSSEEGGG--TT---EEEEEEEST---TS-S--------------SEEECEEEEEEEEETTEEEEE
T ss_pred EEeccCCcccccCCCceecHHHhcCC--CeEEEEEecc---ccee--------------eeecCCEEEEeeccCCCcEEE
Confidence 222221 22 23344 5577888773 2222 389999999863 45 699
Q ss_pred EEccCCceEEeCCeeechHHHHHHHhcC---c--CcceeEEEec
Q 036361 439 IKDRSKDVIISGGENICSAEVESVLYSN---T--AVNEAAVVAR 477 (485)
Q Consensus 439 ~~gR~~~~i~~~G~~i~~~~ie~~l~~~---~--~v~~~~v~~~ 477 (485)
|+||.+.++.+.|++++-.+|++++.+. . .+.+..+.+.
T Consensus 391 F~~R~~~~l~l~gEkl~e~~v~~av~~~~~~~~~~~~~f~~~~~ 434 (528)
T PF03321_consen 391 FVGRRGQVLSLFGEKLSEEQVQEAVARALQETGLELRDFTVAPD 434 (528)
T ss_dssp EEEETTEEE-SSS--EEHHHHHHHHHHHHHCTT-EEEEEEEEEE
T ss_pred EeccCCceeecceeecCHHHHHHHHHHHHHhcCCceeeEEEEee
Confidence 9999999999999999999999999864 2 2455555544
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=97.73 E-value=0.0082 Score=60.14 Aligned_cols=44 Identities=11% Similarity=0.152 Sum_probs=37.9
Q ss_pred eeecCceEEEec----CceEEEEccCCceEEeCCeeechHHHHHHHhc
Q 036361 422 WFYTGDIAVMHV----DGYVEIKDRSKDVIISGGENICSAEVESVLYS 465 (485)
Q Consensus 422 ~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~ 465 (485)
.||.||+.++.. --.|.|++|.+.+..+.|++.+-.++..++.+
T Consensus 416 RYrlGDvv~V~GF~n~~P~~~Fv~R~~~vlsi~gEK~tE~~l~~Av~~ 463 (606)
T PLN02247 416 RYRVGDILMVTGFYNNAPQFRFVQRRNVVLSIDTDKTNEEDLLKAVTQ 463 (606)
T ss_pred EEecCCEEEEeeecCCCceEEEEecCCceeecccccCCHHHHHHHHHH
Confidence 489999999852 24599999999999999999999999888875
No 135
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=97.54 E-value=0.0045 Score=62.41 Aligned_cols=43 Identities=12% Similarity=0.138 Sum_probs=38.3
Q ss_pred eecCceEEEecC----ceEEEEccCCceEEeCCeeechHHHHHHHhc
Q 036361 423 FYTGDIAVMHVD----GYVEIKDRSKDVIISGGENICSAEVESVLYS 465 (485)
Q Consensus 423 ~~TGD~~~~~~~----g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~ 465 (485)
|+.||++++..- -+|.|+||.+.++.+.|+++.-.+++.+|.+
T Consensus 410 Y~iGDvVrvtgf~~~~P~i~F~gR~~~~ls~~GEKl~e~~v~~Av~~ 456 (597)
T PLN02249 410 YRVGDILRVTGFHNSAPQFKFIRRKNVLLSIESDKTDEADLQKAVEN 456 (597)
T ss_pred eecCCEEEEeeccCCCcEEEEEccCCcceecccccCCHHHHHHHHHH
Confidence 899999999632 3589999999999999999999999998876
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=97.40 E-value=0.013 Score=58.57 Aligned_cols=44 Identities=11% Similarity=0.133 Sum_probs=37.6
Q ss_pred eeecCceEEEec----CceEEEEccCCceEEeCCeeechHHHHHHHhc
Q 036361 422 WFYTGDIAVMHV----DGYVEIKDRSKDVIISGGENICSAEVESVLYS 465 (485)
Q Consensus 422 ~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~ 465 (485)
.||.||+.++.. .-.|.|++|.+-+..+.|++.+-.++..++.+
T Consensus 422 RYrlGDvv~V~Gf~n~~P~~~Fv~R~~~~lsi~gEK~tE~~l~~Av~~ 469 (612)
T PLN02620 422 RYRVGDVLRVAGFKNKAPQFSFICRKNVVLSIDSDKTDEVELQNAVKN 469 (612)
T ss_pred EEecCCEEEEeeecCCCceEEEEeecCceeecccccCCHHHHHHHHHH
Confidence 389999999852 24599999999999999999999999888764
No 137
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=96.42 E-value=0.03 Score=53.61 Aligned_cols=93 Identities=18% Similarity=0.159 Sum_probs=77.9
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 39 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
-+|+.++...+..+|+.|...|..+||+|.++..-+ ..-+...+|+.++|++++|+.+. .-+....+++..++.+|.
T Consensus 109 ~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI~ 187 (438)
T COG1541 109 GYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVIA 187 (438)
T ss_pred ecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEEE
Confidence 499999999999999999999999999998887622 12267888999999999999874 345667889999999999
Q ss_pred EcCcchHHHHHHhccC
Q 036361 117 VDHLHSSLVLEALSLF 132 (485)
Q Consensus 117 ~~~~~~~~~~~~~~~~ 132 (485)
+.+...-.+.+.....
T Consensus 188 ~tps~~l~lae~~~~~ 203 (438)
T COG1541 188 ATPSYLLYLAEEAEEE 203 (438)
T ss_pred EChHHHHHHHHHHHHc
Confidence 9998887777666665
No 138
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=95.99 E-value=0.0035 Score=44.24 Aligned_cols=27 Identities=59% Similarity=0.867 Sum_probs=25.5
Q ss_pred HHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 458 EVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 458 ~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
|||+++.+||+|.+|+|++.+++.+|+
T Consensus 1 EIE~~l~~~~~V~~~~V~~~~d~~~g~ 27 (73)
T PF13193_consen 1 EIESVLRQHPGVAEAAVVGVPDEDWGE 27 (73)
T ss_dssp HHHHHHHTSTTEEEEEEEEEEETTTEE
T ss_pred CHHHHHhcCCCccEEEEEEEEcccccc
Confidence 799999999999999999999998885
No 139
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=91.51 E-value=2 Score=42.14 Aligned_cols=89 Identities=17% Similarity=0.164 Sum_probs=68.7
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 39 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
.+|..++......+++.+...|+++||++....+... ......+++...|+..++++... .+.+...+++.++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 4788888877777888888889999999887665442 22334677889999999987654 57788899999999999
Q ss_pred EcCcchHHHHHH
Q 036361 117 VDHLHSSLVLEA 128 (485)
Q Consensus 117 ~~~~~~~~~~~~ 128 (485)
..+.....+.+.
T Consensus 173 ~~Ps~l~~L~~~ 184 (422)
T TIGR02155 173 VTPSYMLNLLEE 184 (422)
T ss_pred EcHHHHHHHHHH
Confidence 998776655443
No 140
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=91.26 E-value=2.8 Score=41.54 Aligned_cols=84 Identities=12% Similarity=0.094 Sum_probs=64.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
.-+|..++...+...++.+...|+++||++.++.+.+.. .....+++..+|+.+++... .+....+++..++..+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 348999999998888988888999999999998876542 23456788899998877653 2345678899999999
Q ss_pred EEcCcchHH
Q 036361 116 FVDHLHSSL 124 (485)
Q Consensus 116 i~~~~~~~~ 124 (485)
+......-.
T Consensus 181 ~~~ps~ll~ 189 (445)
T TIGR03335 181 VASVFKLLR 189 (445)
T ss_pred EECHHHHHH
Confidence 886654433
No 141
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=82.63 E-value=15 Score=36.92 Aligned_cols=86 Identities=13% Similarity=0.087 Sum_probs=65.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|+..+...+..+... .+++++|++...++-.- .+...+++++..|+.+++. +..+++.+...+++.++.++
T Consensus 184 v~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~ 259 (513)
T PRK07656 184 AMLTHRQLLSNAADWAEY---LGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILPL-PVFDPDEVFRLIETERITVL 259 (513)
T ss_pred EEEecHHHHHHHHHHHHh---hCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEec-CcCCHHHHHHHHHHhCCeEE
Confidence 468999887666554333 47899999988877643 3445678999999988775 56788899999999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
+..+.....+..
T Consensus 260 ~~~p~~~~~l~~ 271 (513)
T PRK07656 260 PGPPTMYNSLLQ 271 (513)
T ss_pred echHHHHHHHHc
Confidence 988776665543
No 142
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=80.55 E-value=23 Score=32.47 Aligned_cols=91 Identities=22% Similarity=0.273 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC----CHHHHHHHhhhcCCcEEEEcCcc-
Q 036361 47 RRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL----DAHNLSVLLQHSESKLVFVDHLH- 121 (485)
Q Consensus 47 ~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~ii~~~~~- 121 (485)
-|...||+.|++. |..|.+++.+........ +...|..+..++... ..+++...+++.+++++|+|.-.
T Consensus 18 ~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~~--i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~~ 91 (279)
T TIGR03590 18 MRCLTLARALHAQ----GAEVAFACKPLPGDLIDL--LLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYGL 91 (279)
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHHH--HHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCCC
Confidence 3678899999764 557888887766554433 357787777774432 34568888999999999999743
Q ss_pred hHHHHHHhccCCCCCCCCeEEEecCCc
Q 036361 122 SSLVLEALSLFPRDTKRPHLVLVDDDA 148 (485)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~i~~~~~~ 148 (485)
...+....+. ..+.++++++..
T Consensus 92 ~~~~~~~~k~-----~~~~l~~iDD~~ 113 (279)
T TIGR03590 92 DADWEKLIKE-----FGRKILVIDDLA 113 (279)
T ss_pred CHHHHHHHHH-----hCCeEEEEecCC
Confidence 3333333332 345777777754
No 143
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=80.43 E-value=12 Score=33.11 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=44.1
Q ss_pred HHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCC
Q 036361 57 SSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSES 112 (485)
Q Consensus 57 ~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 112 (485)
...|+.++|++. ..|-.- -+...+++++..|++.+.+ ++.+++++-..+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 557899999999 887653 4456789999999998888 68899998888888765
No 144
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=79.86 E-value=15 Score=36.93 Aligned_cols=87 Identities=20% Similarity=0.215 Sum_probs=65.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|++.+...+..... ..+++++|++....+... ..+...++++..|+..+..+.. +.+.+...+++.++..++
T Consensus 185 v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~~-~~~~~~~~l~~~~~t~l~ 260 (521)
T PRK06187 185 VVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRRF-DPENLLDLIETERVTFFF 260 (521)
T ss_pred EEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCCC-CHHHHHHHHHHhCCeEEE
Confidence 35899988876666554 458899999988877653 3234455688899998877665 888999999999999999
Q ss_pred EcCcchHHHHHH
Q 036361 117 VDHLHSSLVLEA 128 (485)
Q Consensus 117 ~~~~~~~~~~~~ 128 (485)
..+.....+...
T Consensus 261 ~~p~~~~~l~~~ 272 (521)
T PRK06187 261 AVPTIWQMLLKA 272 (521)
T ss_pred chHHHHHHHHcC
Confidence 988766655443
No 145
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=79.31 E-value=18 Score=35.17 Aligned_cols=88 Identities=9% Similarity=0.020 Sum_probs=66.1
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.+|.+|++. -....+|.+.+...+..... ..++++++++....+.... .+..+++++..|+..+.++
T Consensus 8 ~pd~~a~~~--------~~~~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~-~~~~~~A~~~~G~~~v~l~~ 78 (417)
T PF00501_consen 8 YPDRIALID--------DEGRSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIE-FVVAFLACLRAGAIPVPLDP 78 (417)
T ss_dssp STTSEEEEE--------TTTEEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHH-HHHHHHHHHHTT-EEEEEET
T ss_pred CCCceEEEE--------CCCEEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccce-eeeeeccccccccccccccc
Confidence 456777766 23467888888877665544 3478889988888877543 3455788888899988885
Q ss_pred cCCHHHHHHHHHhcCceeeec
Q 036361 262 RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.....++...+++.++++++.
T Consensus 79 ~~~~~~~~~~l~~~~~~~ii~ 99 (417)
T PF00501_consen 79 SLSEDELRHILRQSGPKVIIT 99 (417)
T ss_dssp TSSHHHHHHHHHHHTESEEEE
T ss_pred ccccccccccccccceeEEEE
Confidence 578899999999999999996
No 146
>PLN02736 long-chain acyl-CoA synthetase
Probab=78.81 E-value=43 Score=35.12 Aligned_cols=100 Identities=10% Similarity=-0.013 Sum_probs=72.5
Q ss_pred EEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|.+.+...+..+.. ..++.++|++...++....+. ...++++..|+..+.+. .+.+.++...++..++..++
T Consensus 77 ~~lTy~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~-~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~ 155 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWL-IVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIF 155 (651)
T ss_pred EEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEE
Confidence 45788888777665544 457899999988888766532 34578888888888664 67899999999999999999
Q ss_pred cchHHHHHHhCCCCCCCCCCCceEEec
Q 036361 282 GAPVVLNMISNSPDFEPLKTPVQILTA 308 (485)
Q Consensus 282 ~~p~~~~~l~~~~~~~~l~~lr~i~~~ 308 (485)
..+..+..+.... ..++.++.+++.
T Consensus 156 ~~~~~~~~~~~~~--~~~~~l~~ii~~ 180 (651)
T PLN02736 156 CVPQTLNTLLSCL--SEIPSVRLIVVV 180 (651)
T ss_pred ECHHHHHHHHHHh--hcCCCceEEEEE
Confidence 9988777665432 123445555543
No 147
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B.
Probab=76.20 E-value=2.9 Score=31.11 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=20.3
Q ss_pred CeeechHHHHHHHhcCcCcceeEEE
Q 036361 451 GENICSAEVESVLYSNTAVNEAAVV 475 (485)
Q Consensus 451 G~~i~~~~ie~~l~~~~~v~~~~v~ 475 (485)
|.+++|..||++|.++|++...+.+
T Consensus 1 GvnvfP~~Ie~vl~~~~~~~~~y~i 25 (96)
T PF14535_consen 1 GVNVFPSQIEEVLREFPEVSPEYQI 25 (96)
T ss_dssp TEEE-HHHHHHHHCTSTTEEEEEEE
T ss_pred CcEECHHHHHHHHHhCcCCCCcEEE
Confidence 8899999999999999999944333
No 148
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=75.46 E-value=45 Score=32.23 Aligned_cols=99 Identities=19% Similarity=0.102 Sum_probs=73.6
Q ss_pred CCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCC
Q 036361 28 SDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTR 97 (485)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~ 97 (485)
++.++++.. ...+|++.+...+..+.. ..+++++|++....+-... .+..+++.+..|+..+..+..
T Consensus 119 ~~~~~~i~~TSGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~ 195 (408)
T TIGR01733 119 PDDLAYVIYTSGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPED 195 (408)
T ss_pred CCCcEEEEEcCCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChh
Confidence 466666642 146888888877776655 4577889999888776543 455678888889888877666
Q ss_pred CC--HHHHHHHhhhcCCcEEEEcCcchHHHHHHh
Q 036361 98 LD--AHNLSVLLQHSESKLVFVDHLHSSLVLEAL 129 (485)
Q Consensus 98 ~~--~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (485)
.. +..+..++++.++..+++.+.....+.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~ 229 (408)
T TIGR01733 196 EERDAALLAALIAEHPVTVLNLTPSLLALLAAAL 229 (408)
T ss_pred hccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhh
Confidence 55 678899999999999999998887766543
No 149
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=75.28 E-value=52 Score=33.54 Aligned_cols=98 Identities=7% Similarity=0.034 Sum_probs=69.0
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (485)
.|+.+|++.. +..+|++.+...+.... ...++.++|++...+|-.- -+...++..+..|+..+...
T Consensus 181 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~~~ 257 (539)
T PRK06334 181 DPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVFAY 257 (539)
T ss_pred CcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEEec
Confidence 3566776652 24699998876654443 3357889998888777432 23334566777888877665
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
....++.+...+++.++..+...+.....+.+
T Consensus 258 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 289 (539)
T PRK06334 258 NPLYPKKIVEMIDEAKVTFLGSTPVFFDYILK 289 (539)
T ss_pred CCCCHHHHHHHHHHhCCcEEEecHHHHHHHHH
Confidence 55678889999999999999998877766544
No 150
>PRK08315 AMP-binding domain protein; Validated
Probab=74.74 E-value=27 Score=35.64 Aligned_cols=84 Identities=8% Similarity=0.025 Sum_probs=63.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN--VPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|+..+...+..+... .+++++|++....|- ...++..+++.+..|+..+......++..+...+++.++..+
T Consensus 217 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~ 293 (559)
T PRK08315 217 ATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTAL 293 (559)
T ss_pred EEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEE
Confidence 468888887665554433 588999999887775 344556678889999888866666778888999999999999
Q ss_pred EEcCcchHH
Q 036361 116 FVDHLHSSL 124 (485)
Q Consensus 116 i~~~~~~~~ 124 (485)
+..+.....
T Consensus 294 ~~~P~~~~~ 302 (559)
T PRK08315 294 YGVPTMFIA 302 (559)
T ss_pred ecchHHHHH
Confidence 887765543
No 151
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=71.83 E-value=36 Score=33.43 Aligned_cols=106 Identities=11% Similarity=0.061 Sum_probs=75.3
Q ss_pred ccEEeccHHHHHHHHHH---HHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCcee
Q 036361 204 KGVVHSHRGIFILTANA---LIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTH 279 (485)
Q Consensus 204 K~v~~s~~~~~~~~~~~---~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 279 (485)
.++.+|.+.+...+.++ ...+++.++|++..+.|.+...- .+.+++..+|...+-.. .+...++.-.|++.++..
T Consensus 74 eg~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgpN~~~w~-l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~ 152 (596)
T KOG1177|consen 74 EGIRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGPNSYEWV-LCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKA 152 (596)
T ss_pred ccchhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecCChHHHH-HHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEE
Confidence 35667888887655444 44578999999999999776542 23466667777777664 467788888999999999
Q ss_pred eecchHHH-----HHHhCCC-----------CCCCCCCCceEEeccC
Q 036361 280 MCGAPVVL-----NMISNSP-----------DFEPLKTPVQILTAGA 310 (485)
Q Consensus 280 ~~~~p~~~-----~~l~~~~-----------~~~~l~~lr~i~~~g~ 310 (485)
++..|.+- +.+.+.. +...++.++.++..+|
T Consensus 153 l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~lthvi~~~e 199 (596)
T KOG1177|consen 153 LFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPELTHVILADE 199 (596)
T ss_pred EEccchhhhchHHHHHHHhhHHhhcCCCccccccccccceEEEecCC
Confidence 99988653 3333322 4556788888888773
No 152
>PRK12583 acyl-CoA synthetase; Provisional
Probab=71.71 E-value=37 Score=34.62 Aligned_cols=83 Identities=17% Similarity=0.113 Sum_probs=62.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCC--chhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPN--VPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|+..+...+..+... .+++++|++....|- ....+..+++++..|+.++.......+..+...+++.++..+
T Consensus 219 v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l 295 (558)
T PRK12583 219 ATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTAL 295 (558)
T ss_pred EEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEE
Confidence 468999887665555443 488999998777664 345566778888899888754555678888899999999999
Q ss_pred EEcCcchH
Q 036361 116 FVDHLHSS 123 (485)
Q Consensus 116 i~~~~~~~ 123 (485)
+..+....
T Consensus 296 ~~~P~~~~ 303 (558)
T PRK12583 296 YGVPTMFI 303 (558)
T ss_pred eccHHHHH
Confidence 88776543
No 153
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=71.43 E-value=18 Score=34.55 Aligned_cols=89 Identities=16% Similarity=0.168 Sum_probs=61.6
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEEcC----
Q 036361 49 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFVDH---- 119 (485)
Q Consensus 49 ~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~~---- 119 (485)
...+.-.|..++++|||.|.+ .+..|+.+.=++...|+.+|.+|-+ .+++.++..+... .|.|+.-+
T Consensus 59 T~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipVhl~G~ 134 (374)
T COG0399 59 TAALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPVHLAGQ 134 (374)
T ss_pred HHHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEehhccC
Confidence 445555677778999995544 4678899999999999999998755 4788888888776 66666632
Q ss_pred -cchHHHHHHhccCCCCCCCCeEEEecCCc
Q 036361 120 -LHSSLVLEALSLFPRDTKRPHLVLVDDDA 148 (485)
Q Consensus 120 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 148 (485)
-..+.+.++.+. ..+.++.|..
T Consensus 135 ~~dm~~i~~la~~-------~~l~vIEDaA 157 (374)
T COG0399 135 PCDMDAIMALAKR-------HGLPVIEDAA 157 (374)
T ss_pred CCCHHHHHHHHHH-------cCCeEEEEcc
Confidence 344555555433 3455555554
No 154
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=71.22 E-value=36 Score=34.22 Aligned_cols=86 Identities=9% Similarity=-0.068 Sum_probs=65.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|+..+...+...... .+++++|++...+|-... .+..+++++..|+..+.. +...++.+...+++.++.++.
T Consensus 179 v~~t~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATY---LENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHH---hCCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 468999888776666543 367899999888886532 345677889999998866 456788899999999999999
Q ss_pred EcCcchHHHHH
Q 036361 117 VDHLHSSLVLE 127 (485)
Q Consensus 117 ~~~~~~~~~~~ 127 (485)
..+.....+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 98877666543
No 155
>PLN02565 cysteine synthase
Probab=69.52 E-value=51 Score=30.98 Aligned_cols=89 Identities=12% Similarity=0.056 Sum_probs=61.7
Q ss_pred CcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 30 CPSIVYNNT--TYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 30 ~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
++.+..... +-|+++= -+..+-..+.+.|. .+|....+....+-.-+...++|...|..+..+-|...+......
T Consensus 31 ~i~~K~E~~nPtGSfKdR--~A~~~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 108 (322)
T PLN02565 31 RIAAKLEMMEPCSSVKDR--IGYSMITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRII 108 (322)
T ss_pred eEEEEecccCCccchHHH--HHHHHHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHH
Confidence 455544443 3344432 23333333444564 788666666777777778888889999998887787778888899
Q ss_pred hhhcCCcEEEEcCc
Q 036361 107 LQHSESKLVFVDHL 120 (485)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (485)
++..+++++++++.
T Consensus 109 i~~~GA~V~~~~~~ 122 (322)
T PLN02565 109 LLAFGAELVLTDPA 122 (322)
T ss_pred HHHcCCEEEEeCCC
Confidence 99999999999864
No 156
>PRK09274 peptide synthase; Provisional
Probab=69.13 E-value=62 Score=32.98 Aligned_cols=97 Identities=7% Similarity=-0.028 Sum_probs=66.4
Q ss_pred CCCcEEEEecCCC-CCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 187 EWDPMVLNYTSGT-TSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 187 ~~~~~~i~~TSGt-TG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
++.++++....++ ....+...+|.+.+...+..+... .++.+++++...++....+ ...+++++..|+..+..+
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~-~~~~la~~~~G~~~v~l~~ 98 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEF-FALTFALFKAGAVPVLVDP 98 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHH-HHHHHHHHHcCeEEEEcCC
Confidence 4466665433222 122233368888887766655544 4788999999888865543 334678888888888775
Q ss_pred cCCHHHHHHHHHhcCceeeecch
Q 036361 262 RFDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p 284 (485)
.+...++...+++.++..++..+
T Consensus 99 ~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 99 GMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CccHHHHHHHHHhcCCCEEEecc
Confidence 46788899999999999888754
No 157
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=68.15 E-value=47 Score=33.69 Aligned_cols=86 Identities=15% Similarity=0.022 Sum_probs=69.3
Q ss_pred cEEeccHHHHHHHHHHHHHhC-----CCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCce
Q 036361 205 GVVHSHRGIFILTANALIDWA-----VPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVT 278 (485)
Q Consensus 205 ~v~~s~~~~~~~~~~~~~~~~-----~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t 278 (485)
+..+|+..+...+......+. ..++|++....|....+.. ..++++..|+.+.-.. .+++.++...++.-++.
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~-~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVE-LALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHH-HHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 779999999888877766552 6789999999998766533 3567888888877765 68999999999999999
Q ss_pred eeecchHHHHHHh
Q 036361 279 HMCGAPVVLNMIS 291 (485)
Q Consensus 279 ~~~~~p~~~~~l~ 291 (485)
.++.....+..+.
T Consensus 122 iif~d~~~~~~i~ 134 (537)
T KOG1176|consen 122 LIFVDEDFYDKIS 134 (537)
T ss_pred EEEEcCchHHHHH
Confidence 9999887777764
No 158
>PLN03052 acetate--CoA ligase; Provisional
Probab=67.81 E-value=66 Score=34.31 Aligned_cols=98 Identities=10% Similarity=0.064 Sum_probs=70.0
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++....+..+.+ ...+|.+.+...+..+.. ..++.++|++...+|..-.+ ...+++++..|+..+.+.
T Consensus 188 ~pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e~-via~LA~~~~Gav~vpi~p 265 (728)
T PLN03052 188 TDDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVHA-VIIYLAIILAGCVVVSIAD 265 (728)
T ss_pred CCCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeCC
Confidence 355677665433221222 346888888776655544 45789999999999976554 345678888888877664
Q ss_pred cCCHHHHHHHHHhcCceeeecchH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
.+.+.++...++..++..++....
T Consensus 266 ~~~~~~l~~rl~~~~~k~lit~d~ 289 (728)
T PLN03052 266 SFAPSEIATRLKISKAKAIFTQDV 289 (728)
T ss_pred CCCHHHHHHHHHhcCceEEEEcCc
Confidence 688999999999999999988654
No 159
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=67.78 E-value=56 Score=26.19 Aligned_cols=100 Identities=14% Similarity=0.009 Sum_probs=57.3
Q ss_pred EEEEecch-hhHhHHHHHHHHH-hhcceEeecc-cCCHHHHHHHHHhcCceeeecchH------HHHHHhCCCCCCCCCC
Q 036361 231 VYLWTLPM-FHANGWGYTWGMA-AVGATNICLR-RFDASAISDLIQKHNVTHMCGAPV------VLNMISNSPDFEPLKT 301 (485)
Q Consensus 231 ~~~~~~p~-~~~~g~~~~~~~l-~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~------~~~~l~~~~~~~~l~~ 301 (485)
+++.+.+- .|..|...+...+ ..|-.++... ...++++.+.+.++++..+..+.. .+..+.+..+...++.
T Consensus 6 vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~ 85 (137)
T PRK02261 6 VVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGD 85 (137)
T ss_pred EEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCC
Confidence 34444443 6888876643333 5576777665 457899999999999998776532 2222222223333444
Q ss_pred CceEEeccCCC-C----hhhhhhhhccCCeeeeccCC
Q 036361 302 PVQILTAGAPP-P----APVLSRTESMGFVVCHGYGL 333 (485)
Q Consensus 302 lr~i~~~g~~l-~----~~~~~~~~~~~~~i~~~Yg~ 333 (485)
+ .+++||... + .+..+.+++.| +-..|+.
T Consensus 86 ~-~i~vGG~~~~~~~~~~~~~~~l~~~G--~~~vf~~ 119 (137)
T PRK02261 86 I-LLYVGGNLVVGKHDFEEVEKKFKEMG--FDRVFPP 119 (137)
T ss_pred C-eEEEECCCCCCccChHHHHHHHHHcC--CCEEECc
Confidence 4 466777653 2 33445566656 3344543
No 160
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=67.41 E-value=14 Score=29.62 Aligned_cols=41 Identities=10% Similarity=0.138 Sum_probs=33.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC---chhHHHHHHhhhccCce
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPN---VPSMYELQFGVPMSGAI 90 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~---~~~~~~~~lA~~~~G~~ 90 (485)
..+++.|.+.|+.+++.|.+++.. +.....+++++-.+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 478888999999999999999975 56667777788888855
No 161
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=66.91 E-value=79 Score=31.44 Aligned_cols=86 Identities=16% Similarity=0.190 Sum_probs=62.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|++.+...+.... ...+++++|++...+|-.- ..+..+++.+..|+..+..+ ..++.++...+++.++..+.
T Consensus 159 v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~l~ 234 (483)
T PRK03640 159 VIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLVE-KFDAEKINKLLQTGGVTIIS 234 (483)
T ss_pred EEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEecC-CCCHHHHHHHHHHhCCcEEE
Confidence 3588888765543332 2368999999999887532 22344677778899887765 56789999999999999999
Q ss_pred EcCcchHHHHH
Q 036361 117 VDHLHSSLVLE 127 (485)
Q Consensus 117 ~~~~~~~~~~~ 127 (485)
..+.....+..
T Consensus 235 ~~P~~~~~l~~ 245 (483)
T PRK03640 235 VVSTMLQRLLE 245 (483)
T ss_pred eHHHHHHHHHh
Confidence 98877666543
No 162
>PRK07529 AMP-binding domain protein; Validated
Probab=66.80 E-value=61 Score=33.83 Aligned_cols=96 Identities=13% Similarity=0.113 Sum_probs=65.6
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR 262 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 262 (485)
.++.+|++....+.. ..+...+|.+.+...+..... ..++.+++++...+|....+ ...+++++..|..+.+-+.
T Consensus 38 ~p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~~pi~~~ 115 (632)
T PRK07529 38 HPDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPET-HFALWGGEAAGIANPINPL 115 (632)
T ss_pred CCCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEEEeCCCc
Confidence 455777766533211 123457888888776655544 45788999999999876654 3345677777743333346
Q ss_pred CCHHHHHHHHHhcCceeeecc
Q 036361 263 FDASAISDLIQKHNVTHMCGA 283 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~ 283 (485)
+.++++...+++.++..++..
T Consensus 116 ~~~~~i~~~l~~~~~~~li~~ 136 (632)
T PRK07529 116 LEPEQIAELLRAAGAKVLVTL 136 (632)
T ss_pred CCHHHHHHHHHhcCCcEEEEe
Confidence 789999999999999999875
No 163
>PLN03102 acyl-activating enzyme; Provisional
Probab=65.74 E-value=66 Score=33.14 Aligned_cols=81 Identities=12% Similarity=0.105 Sum_probs=62.1
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+...... .++.++|++...+|..-.+ ...+++++..|+..+..+ .+++.++...++..+++.++.
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~-~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~ 117 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAM-YEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKILFV 117 (579)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEE
Confidence 58888887776665554 4788999999888865543 234678888888877765 578999999999999999998
Q ss_pred chHHHH
Q 036361 283 APVVLN 288 (485)
Q Consensus 283 ~p~~~~ 288 (485)
.+....
T Consensus 118 ~~~~~~ 123 (579)
T PLN03102 118 DRSFEP 123 (579)
T ss_pred ChhhHH
Confidence 765543
No 164
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=64.56 E-value=57 Score=33.46 Aligned_cols=87 Identities=8% Similarity=-0.043 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|++.+...+... ....+++++|++....+.... ....+++.+..|+..+......+++.+...+++.++..+
T Consensus 223 V~~s~~~l~~~~~~~---~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~ 299 (570)
T PRK04319 223 VLHVHNAMLQHYQTG---KYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVW 299 (570)
T ss_pred EEEecHHHHHHHHHH---HHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEE
Confidence 458888876544333 334578899987665554422 244577888899988887777789999999999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
+..+.....+.+
T Consensus 300 ~~~P~~~~~l~~ 311 (570)
T PRK04319 300 YTAPTAIRMLMG 311 (570)
T ss_pred EeCHHHHHHHHh
Confidence 998876666543
No 165
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=64.17 E-value=1.1e+02 Score=32.77 Aligned_cols=117 Identities=9% Similarity=0.117 Sum_probs=79.9
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh------CCCCC-----------CEEEEecchhhHhHHHHHH
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW------AVPKQ-----------PVYLWTLPMFHANGWGYTW 248 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~------~~~~~-----------~~~~~~~p~~~~~g~~~~~ 248 (485)
.++.+|++....| .+ ...+|.+.+...+..+...+ ++.++ +++....+-+..+ +...+
T Consensus 74 ~p~~~Al~~~~~g---~~-~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew-~~~~l 148 (746)
T PTZ00342 74 NNNKIAIVEHSCG---EP-QNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINW-LVADL 148 (746)
T ss_pred cCCceeEeccCCC---CC-ceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHH-HHHHH
Confidence 3566777543222 11 24688888877766554432 57776 7888787765443 33467
Q ss_pred HHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEecc
Q 036361 249 GMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAG 309 (485)
Q Consensus 249 ~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g 309 (485)
+++..|+..+-+. .+.+.++...+++-++.+++..+..+..+.... ..++.++.+++-+
T Consensus 149 A~~~~Gav~Vpl~~~~~~~el~~il~~s~~~~lv~~~~~~~~l~~~~--~~~~~l~~ii~~~ 208 (746)
T PTZ00342 149 ACMLSGVTTLVMHSKFSIDVIVDILNETKLEWLCLDLDLVEGLLERK--NELPHLKKLIILD 208 (746)
T ss_pred HHHHcCCeEEEecCCCCHHHHHHHHhcCCCCEEEEcHHHHHHHHHhh--ccCCCceEEEEEC
Confidence 8888888877764 689999999999999999999888887776532 2355677666543
No 166
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=63.66 E-value=34 Score=33.53 Aligned_cols=84 Identities=12% Similarity=0.134 Sum_probs=62.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|++.+...+..++.. .+++++|++....+-.. ..+..+++.+..|+..+..++. +.+...+++.++..+.
T Consensus 129 v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF---NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH---HHHHHHHHHhCCeEEE
Confidence 468999998877766554 48899999888777542 3334568889999998887643 3788899999999999
Q ss_pred EcCcchHHHHH
Q 036361 117 VDHLHSSLVLE 127 (485)
Q Consensus 117 ~~~~~~~~~~~ 127 (485)
..+.....+.+
T Consensus 203 ~~P~~l~~l~~ 213 (436)
T TIGR01923 203 LVPTQLNRLLD 213 (436)
T ss_pred eHHHHHHHHHh
Confidence 98776655443
No 167
>PLN02654 acetate-CoA ligase
Probab=63.54 E-value=84 Score=33.08 Aligned_cols=95 Identities=13% Similarity=0.007 Sum_probs=68.2
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.+|++..... .+ ....+|.+.+...+..+.. ..+++++|++...+|....+ ...+++++..|+..+.+. .
T Consensus 103 ~~~~Al~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~-v~a~lA~~~~Gav~vpv~~~ 178 (666)
T PLN02654 103 GDKIAIYWEGNE-PG--FDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMEL-PIAMLACARIGAVHSVVFAG 178 (666)
T ss_pred CCCEEEEEEcCC-CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCCC
Confidence 456666542221 11 2356899998877665554 45789999999998876553 344678888888877664 6
Q ss_pred CCHHHHHHHHHhcCceeeecchH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
+.+..+...++..++..++....
T Consensus 179 ~~~~~l~~~l~~~~~~~li~~~~ 201 (666)
T PLN02654 179 FSAESLAQRIVDCKPKVVITCNA 201 (666)
T ss_pred CCHHHHHHHHHhcCceEEEEcCc
Confidence 88999999999999999987654
No 168
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=63.43 E-value=80 Score=33.46 Aligned_cols=102 Identities=11% Similarity=-0.020 Sum_probs=74.0
Q ss_pred cEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceee
Q 036361 205 GVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHM 280 (485)
Q Consensus 205 ~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (485)
...+|.+.+...+..+.. ..++.+++++...++-...+ +...++++..|+..+-.. .+.++++...+++.++..+
T Consensus 104 ~~~~Ty~el~~~v~~lA~~L~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~l 182 (696)
T PLN02387 104 YEWITYGQVFERVCNFASGLVALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTV 182 (696)
T ss_pred cEEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEE
Confidence 356888888877766554 45788999998888766553 234577888888887664 6789999999999999999
Q ss_pred ecchHHHHHHhCCCCCCCCCCCceEEecc
Q 036361 281 CGAPVVLNMISNSPDFEPLKTPVQILTAG 309 (485)
Q Consensus 281 ~~~p~~~~~l~~~~~~~~l~~lr~i~~~g 309 (485)
+.....+..+.+.. ..+..++.+++-+
T Consensus 183 i~~~~~~~~l~~~~--~~~~~l~~ii~~~ 209 (696)
T PLN02387 183 ICDSKQLKKLIDIS--SQLETVKRVIYMD 209 (696)
T ss_pred EECHHHHHHHHHHh--hccCCceEEEEEC
Confidence 99888877775432 2234555555443
No 169
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=63.14 E-value=29 Score=33.42 Aligned_cols=59 Identities=17% Similarity=0.198 Sum_probs=36.9
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEEc
Q 036361 56 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 56 L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+...++++||.|.+-.+. +.....++...|+.+++++.+ .+.+.+...+.. +.++|+..
T Consensus 63 l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 63 ALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 444578899988775443 444455666778887777543 345666666653 56666654
No 170
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=63.08 E-value=82 Score=32.77 Aligned_cols=96 Identities=15% Similarity=0.034 Sum_probs=68.7
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++.... .+| ....+|.+.+...+..+.. ..++.++|++...+|....+ ...+++++..|+..+.+.
T Consensus 70 ~p~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~i~~ 145 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPG--EVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEA-AIAMLACARIGAIHSVVFG 145 (625)
T ss_pred CCCCeEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEeccCC
Confidence 455677765322 122 2356888888776655544 35788999999998866543 345678888888877664
Q ss_pred cCCHHHHHHHHHhcCceeeecchH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
.+.+..+...++..++..++....
T Consensus 146 ~~~~~~l~~~l~~~~~~~li~~~~ 169 (625)
T TIGR02188 146 GFSAEALADRINDAGAKLVITADE 169 (625)
T ss_pred CCCHHHHHHHHHhcCCCEEEEcCc
Confidence 688999999999999999987654
No 171
>PRK06839 acyl-CoA synthetase; Validated
Probab=62.86 E-value=98 Score=30.89 Aligned_cols=85 Identities=11% Similarity=-0.002 Sum_probs=64.6
Q ss_pred cEEeccHHHHHHHHHHHHH----hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCcee
Q 036361 205 GVVHSHRGIFILTANALID----WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTH 279 (485)
Q Consensus 205 ~v~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~ 279 (485)
...+|+..+...+...... .++.+++++...++-...+ ...+++++..|+..+..+ ..++..+...+++.+++.
T Consensus 25 ~~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 25 EEEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEY-IVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred CceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 3578888888776666554 3678899988888776543 344678888888888776 478889999999999999
Q ss_pred eecchHHHHHH
Q 036361 280 MCGAPVVLNMI 290 (485)
Q Consensus 280 ~~~~p~~~~~l 290 (485)
++..+.....+
T Consensus 104 i~~~~~~~~~~ 114 (496)
T PRK06839 104 LFVEKTFQNMA 114 (496)
T ss_pred EEEcHHHHHHH
Confidence 99887766544
No 172
>PRK08316 acyl-CoA synthetase; Validated
Probab=62.78 E-value=75 Score=31.97 Aligned_cols=84 Identities=7% Similarity=-0.067 Sum_probs=63.2
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|...+...+...... .++.+++++....+.... .+..+++++..|+..+..+ .+....+...+++.++..++
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii 113 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARAFL 113 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCEEE
Confidence 568888887766555443 467888998888776554 3445678888888887776 56888999999999999998
Q ss_pred cchHHHHHH
Q 036361 282 GAPVVLNMI 290 (485)
Q Consensus 282 ~~p~~~~~l 290 (485)
........+
T Consensus 114 ~~~~~~~~~ 122 (523)
T PRK08316 114 VDPALAPTA 122 (523)
T ss_pred EccchHHHH
Confidence 887766554
No 173
>PRK05857 acyl-CoA synthetase; Validated
Probab=61.72 E-value=65 Score=32.80 Aligned_cols=80 Identities=15% Similarity=0.047 Sum_probs=61.5
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|.+.+...+..+... .++.+++++...++....+ +..+++++..|+..+..+ .+.+.++...++..++..++
T Consensus 40 ~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e~-~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii 118 (540)
T PRK05857 40 SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPET-YLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAAL 118 (540)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEE
Confidence 458988887777666554 4678899998888766654 345678888898888775 57888999999999999888
Q ss_pred cchHH
Q 036361 282 GAPVV 286 (485)
Q Consensus 282 ~~p~~ 286 (485)
..+..
T Consensus 119 ~~~~~ 123 (540)
T PRK05857 119 VAPGS 123 (540)
T ss_pred Eeccc
Confidence 87654
No 174
>PLN02246 4-coumarate--CoA ligase
Probab=61.69 E-value=90 Score=31.66 Aligned_cols=96 Identities=11% Similarity=0.109 Sum_probs=67.2
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.++++...+ +..+|+..+...+...... .++.+++++....+-+..+ ...+++++..|+..+..+
T Consensus 36 ~~~~~a~~~~~~-------~~~~ty~el~~~~~~la~~L~~~g~~~gd~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~ 107 (537)
T PLN02246 36 FSDRPCLIDGAT-------GRVYTYADVELLSRRVAAGLHKLGIRQGDVVMLLLPNCPEF-VLAFLGASRRGAVTTTANP 107 (537)
T ss_pred CCCCeEEEecCC-------CceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHHcCEEEecCCC
Confidence 355666653211 2368888887776555544 4788999998887766432 334677888888888775
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
.+...++...++..++..++........
T Consensus 108 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 135 (537)
T PLN02246 108 FYTPAEIAKQAKASGAKLIITQSCYVDK 135 (537)
T ss_pred CCCHHHHHHHHHhcCCcEEEEccchHHH
Confidence 5678899999999999988876655443
No 175
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=61.39 E-value=21 Score=34.17 Aligned_cols=85 Identities=16% Similarity=0.173 Sum_probs=53.2
Q ss_pred HHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC---
Q 036361 21 ERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--- 97 (485)
Q Consensus 21 ~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--- 97 (485)
++.++..+.+-++...+. ...+--.|..+|+++||.|++=.- .+..+.-|+..+|+.++.+|-+
T Consensus 32 ~~~a~~~g~~~~~~~~sg----------t~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~ 98 (363)
T PF01041_consen 32 KEFAEYFGVKYAVAVSSG----------TSALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPET 98 (363)
T ss_dssp HHHHHHHTSSEEEEESSH----------HHHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTT
T ss_pred HHHHHHhCCCeEEEeCCh----------hHHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCc
Confidence 344444465666655543 234445566789999999988644 4556667778899999998755
Q ss_pred --CCHHHHHHHhhhcCCcEEEEcC
Q 036361 98 --LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 98 --~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.+++.+...+..-. ++|++.+
T Consensus 99 ~~id~~~~~~~i~~~t-~ai~~~h 121 (363)
T PF01041_consen 99 LNIDPEALEKAITPKT-KAILVVH 121 (363)
T ss_dssp SSB-HHHHHHHHHTTE-EEEEEE-
T ss_pred CCcCHHHHHHHhccCc-cEEEEec
Confidence 46778888776544 6666643
No 176
>PLN02614 long-chain acyl-CoA synthetase
Probab=61.17 E-value=1.4e+02 Score=31.45 Aligned_cols=85 Identities=11% Similarity=-0.063 Sum_probs=64.4
Q ss_pred EEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|.+.+...+..+.. ..++.++|++...++-+..+ +...++++..|+..+-.. .+.+.++...+++.++..++
T Consensus 78 ~~~Ty~el~~~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi 156 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSLRSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVF 156 (666)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEE
Confidence 45788888776655544 45788999999888876653 234678888888877765 57889999999999999999
Q ss_pred cchHHHHHHh
Q 036361 282 GAPVVLNMIS 291 (485)
Q Consensus 282 ~~p~~~~~l~ 291 (485)
.....+..+.
T Consensus 157 ~~~~~~~~~~ 166 (666)
T PLN02614 157 VEEKKISELF 166 (666)
T ss_pred ECHHHHHHHH
Confidence 8877665553
No 177
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=60.95 E-value=96 Score=32.39 Aligned_cols=96 Identities=15% Similarity=0.032 Sum_probs=68.8
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++.... . ......+|.+.+...+..+... .++.++|++...++....+ ...+++++..|+..+..+
T Consensus 80 ~p~~~Al~~~~~-~--~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~l~~ 155 (637)
T PRK00174 80 RGDKVAIIWEGD-D--PGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEA-AVAMLACARIGAVHSVVFG 155 (637)
T ss_pred CCCCeEEEEECC-C--CCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEecCC
Confidence 356777764321 1 1134578999988776665554 4788999999888866554 344678888888887765
Q ss_pred cCCHHHHHHHHHhcCceeeecchH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
.+.+.++...++..++..++....
T Consensus 156 ~~~~~~l~~~l~~~~~~~li~~~~ 179 (637)
T PRK00174 156 GFSAEALADRIIDAGAKLVITADE 179 (637)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcCc
Confidence 578899999999999999987543
No 178
>PLN03051 acyl-activating enzyme; Provisional
Probab=60.83 E-value=50 Score=33.20 Aligned_cols=86 Identities=14% Similarity=-0.014 Sum_probs=60.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|++.+...+... ....++.++|++....|-.- .....+++++..|++.+..+....++.+...+++.++.++.
T Consensus 137 V~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~ 213 (499)
T PLN03051 137 IPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLG 213 (499)
T ss_pred EEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEE
Confidence 457887765543322 23457889998766665432 12345678889999988776545667889999999999999
Q ss_pred EcCcchHHHH
Q 036361 117 VDHLHSSLVL 126 (485)
Q Consensus 117 ~~~~~~~~~~ 126 (485)
.-+.....+.
T Consensus 214 ~vP~~~~~l~ 223 (499)
T PLN03051 214 LVPSIVKAWR 223 (499)
T ss_pred eCHHHHHHHH
Confidence 9877666543
No 179
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=60.19 E-value=54 Score=31.46 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=52.3
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 52 VASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 52 lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+...+.+--++||....+....+-.-+.+.++|...|..+..+-|...+.+....++..++++++++.
T Consensus 98 l~~a~~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 98 IEDAEKKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HHHHHHcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 33333332367886556667778888888889999999988887877777778999999999999974
No 180
>PRK11761 cysM cysteine synthase B; Provisional
Probab=60.17 E-value=58 Score=30.14 Aligned_cols=87 Identities=11% Similarity=0.095 Sum_probs=59.1
Q ss_pred CcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 30 CPSIVYNN--TTYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 30 ~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
++.+.... .+-|+++ +. +..+...+.+.| +++|++|.. ...+-.-..+.++|...|..+..+-|...+......
T Consensus 28 ~i~~K~E~~nptGS~K~-R~-a~~~~~~a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 104 (296)
T PRK11761 28 TILAKLEGNNPAGSVKD-RP-ALSMIVQAEKRGEIKPGDTLIE-ATSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAA 104 (296)
T ss_pred EEEEEEcccCCCCCchh-HH-HHHHHHHHHHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHH
Confidence 45555444 3444554 22 333333344445 577877544 566677777888889999988887777666777889
Q ss_pred hhhcCCcEEEEcC
Q 036361 107 LQHSESKLVFVDH 119 (485)
Q Consensus 107 l~~~~~~~ii~~~ 119 (485)
++..++++++++.
T Consensus 105 ~~~~GA~v~~~~~ 117 (296)
T PRK11761 105 MRAYGAELILVPK 117 (296)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999986
No 181
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=60.12 E-value=93 Score=31.66 Aligned_cols=95 Identities=13% Similarity=0.043 Sum_probs=67.5
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.+|++.... +.++...+|...+...+..+... .++.+++++...++....+ ...+++++..|+..+..+ .
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~~~ 113 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLMPI 113 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccccc
Confidence 45666655322 23344578888887766655554 4788999999888866654 344678888888887665 4
Q ss_pred CCHHHHHHHHHhcCceeeecchH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
....++...++..++..++....
T Consensus 114 ~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 114 FRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cCHHHHHHHHHhcCceEEEEecc
Confidence 67888999999999998886553
No 182
>PRK06188 acyl-CoA synthetase; Validated
Probab=59.79 E-value=91 Score=31.49 Aligned_cols=86 Identities=8% Similarity=0.012 Sum_probs=64.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
..+|+..+...+... ....+++.+|++....|-+-.+...+++.+..|+..+..+ ...+..+...+++.++.+++.
T Consensus 186 v~~s~~~l~~~~~~~---~~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQ---LAEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLA-KFDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHH---HhhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcC-CCCHHHHHHHHHHhCCEEEEe
Confidence 458888877655543 3346888999998888877666666777888898888775 456888999999999999998
Q ss_pred cCcchHHHHH
Q 036361 118 DHLHSSLVLE 127 (485)
Q Consensus 118 ~~~~~~~~~~ 127 (485)
.+.....+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 8766655443
No 183
>PRK07788 acyl-CoA synthetase; Validated
Probab=59.69 E-value=66 Score=32.76 Aligned_cols=83 Identities=10% Similarity=0.017 Sum_probs=63.3
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+...... .++.+++++....+-.-.+ ...+++++..|+..+..+ .+...++...+++.++..++.
T Consensus 74 ~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 152 (549)
T PRK07788 74 TLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGF-VLALYAAGKVGARIILLNTGFSGPQLAEVAAREGVKALVY 152 (549)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEE
Confidence 58888887766555444 4688899998887755432 334678888899988876 478889999999999999998
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.+.....+
T Consensus 153 ~~~~~~~~ 160 (549)
T PRK07788 153 DDEFTDLL 160 (549)
T ss_pred CchhHHHH
Confidence 87766655
No 184
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=58.65 E-value=1.1e+02 Score=31.00 Aligned_cols=88 Identities=19% Similarity=0.234 Sum_probs=61.2
Q ss_pred eeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~-~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|...+...+ .+..+. ..++.++|++..+.|-.-. .....++.+..|+.++...+...++.+..++++.++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 457777764322 222332 3678899988877765322 233346778899998877777788999999999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
...+.....+.+
T Consensus 272 ~~~P~~~~~l~~ 283 (539)
T PRK07008 272 AGVPTVWLGLLN 283 (539)
T ss_pred EechHHHHHHHh
Confidence 888776655543
No 185
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=58.12 E-value=40 Score=32.46 Aligned_cols=58 Identities=14% Similarity=0.164 Sum_probs=37.6
Q ss_pred HHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEEc
Q 036361 57 SSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 57 ~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (485)
...++++||.|.+-.+..+ ....++...|+.++.++.+ .+.+.+...+.. +.++|+..
T Consensus 64 ~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 64 LLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 3457789998877655544 3445566778887777532 456777777654 56766654
No 186
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=57.82 E-value=67 Score=29.84 Aligned_cols=75 Identities=13% Similarity=0.167 Sum_probs=59.3
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccC
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLF 132 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~ 132 (485)
-|.+.|++||.+|+|..--+.-.+...+|... |..+..++... ..-+..++.++++..+...+..+....+....
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 46678999999999999999999999999764 88888886543 23457789999999999887777666665443
No 187
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=57.78 E-value=1.2e+02 Score=31.84 Aligned_cols=94 Identities=12% Similarity=-0.019 Sum_probs=67.1
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.+|++.... .| ....+|.+.+...+..+... .++.++|++...+|....+ ...+++++..|+..+.+. .
T Consensus 98 ~~~~Al~~~~~--~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 98 DDRPAIIFRGE--DG--PRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPET-VVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCeEEEEECC--CC--ceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCcEEEeeCCC
Confidence 45667665322 12 13568888887766555443 4788999999998865543 345678888888877664 6
Q ss_pred CCHHHHHHHHHhcCceeeecchH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
+.+..+...++..++..++....
T Consensus 173 ~~~~~l~~~l~~~~~~~li~~~~ 195 (655)
T PRK03584 173 FGVQGVLDRFGQIEPKVLIAVDG 195 (655)
T ss_pred CCHHHHHHHHHHcCCcEEEEccc
Confidence 78899999999999998887653
No 188
>PRK13388 acyl-CoA synthetase; Provisional
Probab=57.70 E-value=1.1e+02 Score=31.07 Aligned_cols=83 Identities=11% Similarity=-0.028 Sum_probs=62.0
Q ss_pred EeccHHHHHHHHHHHHHh---CC-CCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 207 VHSHRGIFILTANALIDW---AV-PKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~~---~~-~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
.+|...+...+..+...+ ++ .+++++...++....+ ...+++++..|+..+.++ .+...++...+++.++..++
T Consensus 26 ~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~-v~~~lA~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i 104 (540)
T PRK13388 26 TWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEM-LFWLAAAALGGYVLVGLNTTRRGAALAADIRRADCQLLV 104 (540)
T ss_pred eeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHH-HHHHHHHHhCCCEEEEecccCChHHHHHHHHhcCCCEEE
Confidence 678888887776665543 66 6788888888866553 335678888898888765 56788999999999999999
Q ss_pred cchHHHHHH
Q 036361 282 GAPVVLNMI 290 (485)
Q Consensus 282 ~~p~~~~~l 290 (485)
........+
T Consensus 105 ~~~~~~~~~ 113 (540)
T PRK13388 105 TDAEHRPLL 113 (540)
T ss_pred EChhhhHHH
Confidence 876655443
No 189
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=57.40 E-value=1.2e+02 Score=30.53 Aligned_cols=99 Identities=11% Similarity=-0.016 Sum_probs=68.6
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.++++.-.. .+. .-.+|...+...+..... ..++.+++++....+....+- ..+++++..|+..+..+
T Consensus 20 ~p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~-~~~la~~~~G~~~v~l~~ 94 (517)
T PRK08008 20 YGHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFI-FCWFGLAKIGAIMVPINA 94 (517)
T ss_pred CCCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCeEEEEcCc
Confidence 355667654321 111 235777887766655554 347888999998887766543 34578888888877765
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
.+.+..+...++..++..++..+.....
T Consensus 95 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~ 122 (517)
T PRK08008 95 RLLREESAWILQNSQASLLVTSAQFYPM 122 (517)
T ss_pred ccCHHHHHHHHHhcCceEEEEecchhHH
Confidence 5788999999999999999988765543
No 190
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=57.39 E-value=79 Score=32.21 Aligned_cols=84 Identities=10% Similarity=0.014 Sum_probs=65.6
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+...... .++.+++++....+....+ +..+++++..|+..+..+ .+...++...+++.+++.++.
T Consensus 46 ~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~ 124 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVV 124 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEE
Confidence 57888887776665554 4688899988888776654 445788888999888775 578899999999999999999
Q ss_pred chHHHHHHh
Q 036361 283 APVVLNMIS 291 (485)
Q Consensus 283 ~p~~~~~l~ 291 (485)
....+..+.
T Consensus 125 ~~~~~~~~~ 133 (542)
T PRK06155 125 EAALLAALE 133 (542)
T ss_pred ChhhHHHHH
Confidence 887776654
No 191
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=57.38 E-value=2.5e+02 Score=29.49 Aligned_cols=102 Identities=6% Similarity=-0.120 Sum_probs=70.2
Q ss_pred CCCcEEEEec--CCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc
Q 036361 187 EWDPMVLNYT--SGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR 261 (485)
Q Consensus 187 ~~~~~~i~~T--SGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 261 (485)
++.+++.... .+..|. ...+|.+.+...+..+... .++.++|++...++....+. ...++++..|+..+-..
T Consensus 56 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~-~~~lA~~~~G~v~vpl~ 132 (660)
T PLN02430 56 PDNKMLGWRRIVDGKVGP--YMWKTYKEVYEEVLQIGSALRASGAEPGSRVGIYGSNCPQWI-VAMEACAAHSLICVPLY 132 (660)
T ss_pred CCCceEEEEecCCCCCCC--cEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCeEEEec
Confidence 4566654321 232221 2346888887776665543 47889999988888766532 33578888888877664
Q ss_pred -cCCHHHHHHHHHhcCceeeecchHHHHHHh
Q 036361 262 -RFDASAISDLIQKHNVTHMCGAPVVLNMIS 291 (485)
Q Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 291 (485)
.+.++++...++..+++.++.....+..++
T Consensus 133 ~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 133 DTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred cCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 578899999999999999998776544443
No 192
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=57.19 E-value=1.2e+02 Score=31.73 Aligned_cols=92 Identities=16% Similarity=0.044 Sum_probs=66.4
Q ss_pred CCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cC
Q 036361 188 WDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RF 263 (485)
Q Consensus 188 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~ 263 (485)
++++++.... +|. ...+|.+.+...+..+... .++.++|++...+|....+ ...+++++..|+..+... .+
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~-~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQA-VVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCeEEEecCCCC
Confidence 4566655422 222 3468888888776655544 4789999999999876554 344678888888877664 68
Q ss_pred CHHHHHHHHHhcCceeeecch
Q 036361 264 DASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p 284 (485)
.+..+...++..++..++...
T Consensus 174 ~~~~l~~~l~~~~~k~li~~~ 194 (652)
T TIGR01217 174 GARGVLDRFQQIEPKLLFTVD 194 (652)
T ss_pred CHHHHHHHHHhcCCcEEEEcc
Confidence 889999999999999988754
No 193
>PLN03013 cysteine synthase
Probab=56.53 E-value=73 Score=31.25 Aligned_cols=64 Identities=23% Similarity=0.153 Sum_probs=52.0
Q ss_pred HHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 57 SSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 57 ~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.+.| +++|....+....+-.-+...++|...|..++.+-|...+.+....++..++++++++..
T Consensus 166 ~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 3445 588866667777788888888889999998888877777778889999999999999764
No 194
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=56.46 E-value=1.6e+02 Score=29.61 Aligned_cols=95 Identities=15% Similarity=0.027 Sum_probs=67.3
Q ss_pred CCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHhhhccCceEEecCC
Q 036361 28 SDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINT 96 (485)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~ 96 (485)
++.++++.. ...+|++.+...+.... ....+++++|++....|-... +...+++.+..|+.++..+.
T Consensus 160 ~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~~~~ 237 (508)
T TIGR02262 160 ADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVLMGE 237 (508)
T ss_pred CCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEEeCC
Confidence 556666542 24688888876554322 233589999988777775543 33456677888998888776
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 97 RLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
..+...+...+++.++.+++..+.....
T Consensus 238 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 238 RPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred CCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 6678889999999999999998865443
No 195
>PRK08308 acyl-CoA synthetase; Validated
Probab=56.46 E-value=1.9e+02 Score=28.15 Aligned_cols=86 Identities=10% Similarity=0.138 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|++.+...+..+.. ..++.++|++...+|-.- .++..+++.+..|+..+..+ ..+++.+...+++.++.++
T Consensus 119 v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~l~~~~~t~~ 194 (414)
T PRK08308 119 IRRSWTEIDREIEAYNE---ALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIIT-NKNPKFALNILRNTPQHIL 194 (414)
T ss_pred EEEehHhHHHHHHHHHH---hhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecC-CCCHHHHHHHHHHhCCeEE
Confidence 46899988876655544 346778898877777653 34566788899999887764 4567788888999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
+..+.....+..
T Consensus 195 ~~~P~~~~~l~~ 206 (414)
T PRK08308 195 YAVPLMLHILGR 206 (414)
T ss_pred EcCHHHHHHHHh
Confidence 888766655543
No 196
>PRK07798 acyl-CoA synthetase; Validated
Probab=56.33 E-value=1.2e+02 Score=30.45 Aligned_cols=84 Identities=5% Similarity=-0.136 Sum_probs=61.1
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
-.+|...+...+..+... .++.+++++....+....+ +...++++..|+..+..+ .+...++...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~-~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~ 105 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEY-VEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVALV 105 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCEEE
Confidence 368888887766555443 4678889888877654442 334678888888888775 46788999999999999998
Q ss_pred cchHHHHHH
Q 036361 282 GAPVVLNMI 290 (485)
Q Consensus 282 ~~p~~~~~l 290 (485)
........+
T Consensus 106 ~~~~~~~~~ 114 (533)
T PRK07798 106 YEREFAPRV 114 (533)
T ss_pred EchhhHHHH
Confidence 877655544
No 197
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=55.35 E-value=1e+02 Score=31.29 Aligned_cols=83 Identities=12% Similarity=-0.024 Sum_probs=61.3
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|++.+...+..+... .++.+++++...++....+ ...+++++..|+..+..+ .....++...++..++..++
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i 132 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRSLGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIV 132 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEE
Confidence 368888887776655543 4678899998888766654 234678888898877665 46778899999999999888
Q ss_pred cchHHHHH
Q 036361 282 GAPVVLNM 289 (485)
Q Consensus 282 ~~p~~~~~ 289 (485)
.....+..
T Consensus 133 ~~~~~~~~ 140 (546)
T PLN02330 133 TNDTNYGK 140 (546)
T ss_pred Eccchhhh
Confidence 76655543
No 198
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=55.26 E-value=88 Score=28.88 Aligned_cols=60 Identities=15% Similarity=0.118 Sum_probs=49.2
Q ss_pred cC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 59 VG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 59 ~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.| ++||+ ..|=...+-.-+...+.|...|..++.+=|..-+.+-..+|+.+++.+++++.
T Consensus 56 ~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 56 RGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred cCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 35 88998 55556666777777788888999988888877777889999999999999987
No 199
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=55.17 E-value=1.3e+02 Score=31.12 Aligned_cols=95 Identities=13% Similarity=0.016 Sum_probs=68.1
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.++++.- .-.+|.+.+...+...... .++.+++++...++-...+ +..+++++..|+..+..+
T Consensus 50 ~p~~~Ai~~~---------~~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~-v~~~lA~~~~G~~~v~l~~ 119 (600)
T PRK08279 50 HPDRPALLFE---------DQSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEY-LAAWLGLAKLGAVVALLNT 119 (600)
T ss_pred CCCCcEEEeC---------CCcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCC
Confidence 3556776642 1357888887766555443 4678899998888766543 345778888888887775
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
......+...+++.++..++........+
T Consensus 120 ~~~~~~l~~~l~~~~~~~li~~~~~~~~~ 148 (600)
T PRK08279 120 QQRGAVLAHSLNLVDAKHLIVGEELVEAF 148 (600)
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 46788899999999999998877655544
No 200
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=55.13 E-value=1.2e+02 Score=29.48 Aligned_cols=62 Identities=10% Similarity=-0.007 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCceEEec--CCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI--NTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
=+|-+|+.+++=.++..+.+..+...|+-+... ||..+.++....|...+..+.-...+..+
T Consensus 30 l~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~ 93 (406)
T TIGR00936 30 LKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNE 93 (406)
T ss_pred CCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHH
Confidence 368999999999999999999999999987666 88888899999999888886544433333
No 201
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=55.11 E-value=45 Score=23.38 Aligned_cols=66 Identities=9% Similarity=0.092 Sum_probs=51.6
Q ss_pred eeeeHHHHHHHHHHHHH---HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVAS---SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~---~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (485)
...||++|.+.-+.+++ +|....++..|.++|+-=++.. ..-++.|+...+.+++...++..++++
T Consensus 8 gi~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~-----------Sy~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 8 GIATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTS-----------SYYVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred hheeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCce-----------eEEEEEEeccCCHHHHHHHHHHhCchh
Confidence 35799999988877665 4555678889999998766543 235678888899999999999988876
No 202
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=54.90 E-value=1.4e+02 Score=31.21 Aligned_cols=94 Identities=11% Similarity=0.029 Sum_probs=67.8
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec-cc
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL-RR 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 262 (485)
++.+|++....+ .+ ....+|.+.+...+..+.. ..++.++|++...+|..-.+ +..++++...|+..+.+ +.
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~ 150 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLFDG 150 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCCC
Confidence 456666543221 11 1356899998777665554 45899999999999977664 33467888888887666 46
Q ss_pred CCHHHHHHHHHhcCceeeecch
Q 036361 263 FDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p 284 (485)
+.+.++...++..++..++...
T Consensus 151 ~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 151 YSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCHHHHHHHHHhcCCCEEEEcc
Confidence 8999999999999999998754
No 203
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=54.75 E-value=88 Score=28.98 Aligned_cols=89 Identities=11% Similarity=0.025 Sum_probs=57.9
Q ss_pred CCcEEEeCCeeee--HHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHH
Q 036361 29 DCPSIVYNNTTYT--WSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSV 105 (485)
Q Consensus 29 ~~~a~~~~~~~~T--y~~l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (485)
.++.+..+..+-| +++ +.....+. ...+.| +.+|++| +....+-.-..+.+++.+.|..+..+-|...+.....
T Consensus 21 ~~i~~K~E~~nptGS~K~-R~a~~~l~-~a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~ 97 (298)
T TIGR01139 21 ANVFVKLEGRNPSGSVKD-RIALNMIW-DAEKRGLLKPGKTI-VEPTSGNTGIALAMVAAARGYKLILTMPETMSIERRK 97 (298)
T ss_pred ceEEEEEcccCCCCcchH-HHHHHHHH-HHHHcCCCCCCCEE-EEeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHH
Confidence 3555555554333 322 22222333 344456 4778776 5666666777777788889998877777665566688
Q ss_pred HhhhcCCcEEEEcCc
Q 036361 106 LLQHSESKLVFVDHL 120 (485)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (485)
.++..++++++++..
T Consensus 98 ~~~~~GA~v~~~~~~ 112 (298)
T TIGR01139 98 LLKAYGAELVLTPGA 112 (298)
T ss_pred HHHHcCCEEEEECCC
Confidence 899999999999875
No 204
>PRK05850 acyl-CoA synthetase; Validated
Probab=54.34 E-value=1.7e+02 Score=30.07 Aligned_cols=101 Identities=9% Similarity=0.003 Sum_probs=68.5
Q ss_pred CCCCcEEEEecC-CC-CCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec
Q 036361 186 SEWDPMVLNYTS-GT-TSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL 260 (485)
Q Consensus 186 ~~~~~~~i~~TS-Gt-TG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~ 260 (485)
.++.++++.... +. .|. ...+|+..+...+......+ + .++|++...++....+ ...+++++..|+..+..
T Consensus 14 ~p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~-~~~~lA~~~~G~v~vpl 89 (578)
T PRK05850 14 QPDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEY-IVAFLGALQAGLIAVPL 89 (578)
T ss_pred CCCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccH-HHHHHHHHHcCceEEec
Confidence 355666654321 11 121 34688888877665555443 4 4688888888865432 34567888889988877
Q ss_pred cc----CCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 261 RR----FDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 261 ~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
+. ....++...++..++..++..+.....+
T Consensus 90 ~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~ 123 (578)
T PRK05850 90 SVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDV 123 (578)
T ss_pred CCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHH
Confidence 53 3567899999999999999988776654
No 205
>PRK07638 acyl-CoA synthetase; Validated
Probab=54.17 E-value=1.3e+02 Score=30.08 Aligned_cols=87 Identities=6% Similarity=-0.031 Sum_probs=63.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|.+.+...+...+ ...+++++|++....+-.. .++...+..+..|++.+.. +..+++++...+++.++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4688888766554433 3457889999887766543 3345666778889888765 567788899999999999999
Q ss_pred EcCcchHHHHHH
Q 036361 117 VDHLHSSLVLEA 128 (485)
Q Consensus 117 ~~~~~~~~~~~~ 128 (485)
..+.....+...
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 988777665544
No 206
>PRK07514 malonyl-CoA synthase; Validated
Probab=54.17 E-value=1.5e+02 Score=29.71 Aligned_cols=84 Identities=8% Similarity=0.007 Sum_probs=62.5
Q ss_pred EEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|...+...+..... ..++.+++++....+..... ...+++++..|+..+..+ .+.+.++...++..+++.++
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~-~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 105 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEA-LALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPALVV 105 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcEEE
Confidence 46888888666555544 45788999998888766432 344678888898888765 57788999999999999998
Q ss_pred cchHHHHHH
Q 036361 282 GAPVVLNMI 290 (485)
Q Consensus 282 ~~p~~~~~l 290 (485)
..+.....+
T Consensus 106 ~~~~~~~~~ 114 (504)
T PRK07514 106 CDPANFAWL 114 (504)
T ss_pred EccchhHHH
Confidence 887765543
No 207
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.87 E-value=2.5e+02 Score=28.82 Aligned_cols=88 Identities=14% Similarity=0.171 Sum_probs=62.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|++.+...+..+. .....++.++|++...+|-.-.+ ....++.+..|+..+...+..+++.+...+++.++..++
T Consensus 199 v~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 277 (576)
T PRK05620 199 VVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAH 277 (576)
T ss_pred EEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceee
Confidence 4688888765443322 12235788999988887765332 334567777888877766677889999999999999999
Q ss_pred EcCcchHHHH
Q 036361 117 VDHLHSSLVL 126 (485)
Q Consensus 117 ~~~~~~~~~~ 126 (485)
..+.....+.
T Consensus 278 ~~P~~~~~l~ 287 (576)
T PRK05620 278 GVPTLWIQLM 287 (576)
T ss_pred ecCHHHHHHH
Confidence 8876655443
No 208
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=53.86 E-value=2e+02 Score=29.13 Aligned_cols=97 Identities=9% Similarity=-0.026 Sum_probs=67.2
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH---HHHhhhccCceEEec
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE---LQFGVPMSGAILNNI 94 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~---~~lA~~~~G~~~v~l 94 (485)
.++.+|++.. ...+|...+...+.... ...++.++|++...+|-.-.+-. ..++++..|++.+..
T Consensus 181 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v~~ 257 (527)
T TIGR02275 181 KSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSV---EICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVVLA 257 (527)
T ss_pred CCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHH---hhcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEEEC
Confidence 3566666542 24689988876655433 34678899998888776533222 367778889887664
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 95 NTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
+...+..+...+++.++.+++..+.....+..
T Consensus 258 -~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 258 -PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred -CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 44567788889999999999998877655443
No 209
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=53.35 E-value=1.3e+02 Score=30.68 Aligned_cols=82 Identities=7% Similarity=0.009 Sum_probs=62.1
Q ss_pred EEeccHHHHHHHHHHHHHh----CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceee
Q 036361 206 VVHSHRGIFILTANALIDW----AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHM 280 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (485)
..+|.+.+...+..+...+ ++.+++++...++....+ ...+++++..|+..+..+ .+...++...+++.++..+
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~i 126 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceEE
Confidence 3688888887776665543 678899999888876553 334678888898888775 5778899999999999999
Q ss_pred ecchHHHH
Q 036361 281 CGAPVVLN 288 (485)
Q Consensus 281 ~~~p~~~~ 288 (485)
+.......
T Consensus 127 i~~~~~~~ 134 (562)
T PRK05677 127 VCLANMAH 134 (562)
T ss_pred EEecchhh
Confidence 87665443
No 210
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=53.02 E-value=1.1e+02 Score=31.97 Aligned_cols=95 Identities=13% Similarity=0.050 Sum_probs=67.2
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++... ..+|. .-.+|.+.+...+..... ..++.++|++...+|..-.. ...+++++..|+..+...
T Consensus 65 ~p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~-v~~~lA~~~~Gav~vpl~~ 140 (628)
T TIGR02316 65 RGEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEA-VFAMLACARIGAIHSVVFG 140 (628)
T ss_pred CCCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecCC
Confidence 34566665432 22222 246888888776655544 45789999999999876543 345678888888877664
Q ss_pred cCCHHHHHHHHHhcCceeeecch
Q 036361 262 RFDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p 284 (485)
.+.+.++...++..++..++...
T Consensus 141 ~~~~~~l~~~l~~~~~~~li~~~ 163 (628)
T TIGR02316 141 GFASHSLALRIDDATPKLIVSAD 163 (628)
T ss_pred CCCHHHHHHHHHhcCceEEEECC
Confidence 68889999999999999988754
No 211
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=52.46 E-value=1.1e+02 Score=32.08 Aligned_cols=85 Identities=12% Similarity=-0.072 Sum_probs=65.1
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|.+.+...+..+... .++.++|++...++....+ +...++++..|+..+-+. .+.+.++...+++.++..++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~ 154 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAF 154 (660)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEE
Confidence 468988888777665554 4789999999888876553 334678888888877665 57889999999999999999
Q ss_pred cchHHHHHHh
Q 036361 282 GAPVVLNMIS 291 (485)
Q Consensus 282 ~~p~~~~~l~ 291 (485)
.....+..+.
T Consensus 155 ~~~~~~~~~~ 164 (660)
T PLN02861 155 VQESKISSIL 164 (660)
T ss_pred ECHHHHHHHH
Confidence 8776665553
No 212
>PRK13391 acyl-CoA synthetase; Provisional
Probab=52.33 E-value=1.7e+02 Score=29.36 Aligned_cols=96 Identities=9% Similarity=0.110 Sum_probs=68.4
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.++++...++ ..+|...+...+...... .++.+++++....+-...+ +..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~~ 81 (511)
T PRK13391 10 TPDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVNS 81 (511)
T ss_pred CCCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEecccc
Confidence 3556666654432 258888887766555554 3678889988887765553 344678888888888775
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
......+...++..++..++..+.....
T Consensus 82 ~~~~~~l~~~l~~~~~~~li~~~~~~~~ 109 (511)
T PRK13391 82 HLTPAEAAYIVDDSGARALITSAAKLDV 109 (511)
T ss_pred ccCHHHHHHHHhccCCcEEEEchhhHHH
Confidence 4678899999999999999887765543
No 213
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.14 E-value=1.2e+02 Score=30.40 Aligned_cols=83 Identities=8% Similarity=0.051 Sum_probs=61.8
Q ss_pred EeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..... ..++++++++....+-.... ...+++++..|+..+..+ .+....+...+++.+++.++.
T Consensus 11 ~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~-~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 11 VVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEF-FEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHH-HHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 5777777666655544 34688999998888766543 345678888898888775 467888999999999999988
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.+.....+
T Consensus 90 ~~~~~~~~ 97 (502)
T PRK08276 90 SAALADTA 97 (502)
T ss_pred ccchhhHH
Confidence 77666554
No 214
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=52.06 E-value=1.5e+02 Score=30.13 Aligned_cols=84 Identities=7% Similarity=-0.091 Sum_probs=62.4
Q ss_pred EeccHHHHHHHHHHHHH---h-CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 207 VHSHRGIFILTANALID---W-AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~-~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
.+|...+...+...... . ++.+++++....+.... .+..+++++..|+..+..+ ...+.++...++..+++.++
T Consensus 35 ~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 113 (546)
T PRK08314 35 AISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQ-FVIAYYAILRANAVVVPVNPMNREEELAHYVTDSGARVAI 113 (546)
T ss_pred eecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChH-HHHHHHHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEE
Confidence 57888887666554443 3 78889998888875543 3445778888888888765 56788999999999999999
Q ss_pred cchHHHHHHh
Q 036361 282 GAPVVLNMIS 291 (485)
Q Consensus 282 ~~p~~~~~l~ 291 (485)
..+.....+.
T Consensus 114 ~~~~~~~~~~ 123 (546)
T PRK08314 114 VGSELAPKVA 123 (546)
T ss_pred EccchhhhHH
Confidence 8877665543
No 215
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=51.70 E-value=1e+02 Score=28.56 Aligned_cols=89 Identities=10% Similarity=0.032 Sum_probs=59.0
Q ss_pred CCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHH
Q 036361 29 DCPSIVYNNT--TYTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSV 105 (485)
Q Consensus 29 ~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (485)
.++.+...+. +-|++. +.....+.. +.+.| +.+|+.| +....+-.-..+.++|.+.|..+..+-|...+.....
T Consensus 22 ~~i~~K~E~~~ptGS~K~-R~a~~~~~~-a~~~g~~~~g~~v-v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~ 98 (299)
T TIGR01136 22 ARVLAKLEGRNPSGSVKD-RIALSMIED-AEKRGLLKPGDTI-IEATSGNTGIALAMVAAAKGYKLILTMPETMSLERRK 98 (299)
T ss_pred ceEEEEEcccCCCCCccH-HHHHHHHHH-HHHcCCCCCCCEE-EEeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHH
Confidence 3455554442 344443 333333433 34445 4778866 4666677777778888899988887777766666678
Q ss_pred HhhhcCCcEEEEcCc
Q 036361 106 LLQHSESKLVFVDHL 120 (485)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (485)
.++..++++++++..
T Consensus 99 ~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 99 LLRAYGAELILTPAE 113 (299)
T ss_pred HHHHcCCEEEEeCCC
Confidence 899999999999864
No 216
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=51.49 E-value=1.6e+02 Score=26.56 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhhcc------C--ceEEecCCCC---CHHHHHHHhhhcCCcEE
Q 036361 48 RCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMS------G--AILNNINTRL---DAHNLSVLLQHSESKLV 115 (485)
Q Consensus 48 ~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~~~------G--~~~v~l~~~~---~~~~l~~~l~~~~~~~i 115 (485)
..+++.+.+.+. -+.+|++|+|.+.-+.|.++++..+... | ..++.++... ..+.+..+.+..+..+.
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 344555567774 4678999999999999999888777442 2 3444555432 23334555566666655
Q ss_pred EEc
Q 036361 116 FVD 118 (485)
Q Consensus 116 i~~ 118 (485)
+.+
T Consensus 92 v~~ 94 (258)
T PRK10696 92 IEE 94 (258)
T ss_pred EEE
Confidence 554
No 217
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=51.15 E-value=33 Score=26.28 Aligned_cols=41 Identities=15% Similarity=0.164 Sum_probs=33.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+...+.+.|+.+++.|.++|.++.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45666677889999999999999988777777777888863
No 218
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=51.02 E-value=27 Score=29.80 Aligned_cols=33 Identities=24% Similarity=0.571 Sum_probs=28.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVV 70 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~ 70 (485)
.-+||.++++.+.++|..+.+.|.+|.-.||+.
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiaia 37 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAIA 37 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEEc
Confidence 458999999999999999999999998666654
No 219
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=50.65 E-value=1.7e+02 Score=29.80 Aligned_cols=91 Identities=10% Similarity=0.002 Sum_probs=67.3
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc-
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR- 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~- 262 (485)
++.++++...-+. .+|++.+...+......+ ++.++|++...++.+..+ +..+++++..|+..+.++.
T Consensus 25 ~~~~a~~~~~~~~-------~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~-~~~~~a~~~~Gav~vpln~~ 96 (534)
T COG0318 25 PDRPALIFLGRGG-------RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEF-LIAFLAALRAGAVAVPLNPR 96 (534)
T ss_pred CCceEEEEcCCCc-------eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeecCcc
Confidence 4456665543332 789999888776665543 467899998888876553 3456788888999888864
Q ss_pred CCHHHHHHHHHhcCceeeecchH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
..+.++...++..++..++....
T Consensus 97 ~~~~~l~~~l~~~~~~~~~~~~~ 119 (534)
T COG0318 97 LTPRELAYILNDAGAKVLITSAE 119 (534)
T ss_pred cCHHHHHHHHHhcCCeEEEEccc
Confidence 57889999999999999888765
No 220
>PLN02574 4-coumarate--CoA ligase-like
Probab=50.39 E-value=2.2e+02 Score=29.10 Aligned_cols=97 Identities=13% Similarity=0.060 Sum_probs=67.8
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---H-hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---D-WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~-~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 261 (485)
.++.++++-.. ++ ..+|.+.+...+..... . .++.++|++....+....+ +..+++++..|+..+..+
T Consensus 52 ~~~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 52 HNGDTALIDSS---TG----FSISYSELQPLVKSMAAGLYHVMGVRQGDVVLLLLPNSVYF-PVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred cCCCCEEEECC---CC----CcccHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcchH-HHHHHHHHHhCeEEeCcC
Confidence 34566666422 22 14677877666544443 3 5688999999888865443 344678888898888775
Q ss_pred -cCCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 262 -RFDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+...++...++..++..++..+.....+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 46788999999999999998887766554
No 221
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=50.04 E-value=2.1e+02 Score=29.80 Aligned_cols=95 Identities=14% Similarity=0.087 Sum_probs=66.7
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++.. +..+|. .-.+|.+.+...+..+.. ..++.++|++...+|..... ...+++++..|+..+...
T Consensus 66 ~p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~v~~~~ 141 (629)
T PRK10524 66 RPEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEA-AFAMLACARIGAIHSVVFG 141 (629)
T ss_pred CCCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeCC
Confidence 3556676543 222222 346788888776655544 45788999999998876553 344678888888877664
Q ss_pred cCCHHHHHHHHHhcCceeeecch
Q 036361 262 RFDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p 284 (485)
.+.+..+...++..++..++...
T Consensus 142 ~~~~~~l~~~l~~~~~~~li~~~ 164 (629)
T PRK10524 142 GFASHSLAARIDDAKPVLIVSAD 164 (629)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcc
Confidence 67889999999999999988754
No 222
>PLN00011 cysteine synthase
Probab=50.00 E-value=1.1e+02 Score=28.68 Aligned_cols=68 Identities=10% Similarity=-0.001 Sum_probs=50.4
Q ss_pred HHHHHHHcCCCCC-CEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 52 VASSLSSVGIQRG-HVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 52 lA~~L~~~gi~~g-d~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
+...+.+--+.|| +.|. ....+-.-..+.++|...|..+..+-|...+......++..++++++++..
T Consensus 56 l~~a~~~g~~~~g~~~vv-~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 56 IKDAEDKGLITPGKSTLI-EATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHHHHcCCCCCCCcEEE-EeCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3333333337788 5554 567777788888889999998877777666677788999999999999864
No 223
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=49.97 E-value=26 Score=32.12 Aligned_cols=52 Identities=8% Similarity=0.084 Sum_probs=42.7
Q ss_pred eeeHHHHHH-----HHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 39 TYTWSETHR-----RCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 39 ~~Ty~~l~~-----~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.+.|.++.+ ....+...|.+.|+.+++.|.++|.++.....+++++-.+|..
T Consensus 201 ~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 201 NVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 577777763 2456777777889999999999999999999999999888975
No 224
>PRK09088 acyl-CoA synthetase; Validated
Probab=49.95 E-value=1.7e+02 Score=29.18 Aligned_cols=77 Identities=16% Similarity=0.045 Sum_probs=58.1
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+...... .++.+++++....+....+ +..+++++..|+..+..+ ...+..+...+++.+++.++.
T Consensus 22 ~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLLLG 100 (488)
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEEEE
Confidence 58888887766555443 4678889988888766653 334678888888888775 567889999999999999877
Q ss_pred ch
Q 036361 283 AP 284 (485)
Q Consensus 283 ~p 284 (485)
..
T Consensus 101 ~~ 102 (488)
T PRK09088 101 DD 102 (488)
T ss_pred cc
Confidence 55
No 225
>PRK07787 acyl-CoA synthetase; Validated
Probab=49.64 E-value=2.2e+02 Score=28.23 Aligned_cols=84 Identities=12% Similarity=-0.016 Sum_probs=61.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|+..+...+..++.. .++.++|++...+|-. .-++..+++.+..|+.++..+ ...++.+...++ .++..+
T Consensus 146 v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~-~~~t~~ 220 (471)
T PRK07787 146 VVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTG-RPTPEAYAQALS-EGGTLY 220 (471)
T ss_pred EEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecC-CCCHHHHHHHHh-hCceEE
Confidence 458999888776655543 4688899876666542 345566888899999988765 456788888898 899988
Q ss_pred EEcCcchHHHH
Q 036361 116 FVDHLHSSLVL 126 (485)
Q Consensus 116 i~~~~~~~~~~ 126 (485)
...+.....+.
T Consensus 221 ~~~P~~~~~l~ 231 (471)
T PRK07787 221 FGVPTVWSRIA 231 (471)
T ss_pred EcchHHHHHHH
Confidence 88776665544
No 226
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=49.62 E-value=1.9e+02 Score=29.54 Aligned_cols=83 Identities=5% Similarity=-0.071 Sum_probs=62.4
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|...+...+..+... .++.+++++....+..... ...+++++..|+..+..+ .+.+..+...+++.+++.++
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi 125 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIV 125 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceEEE
Confidence 368999887776555543 4688899998888766553 334578888898888765 46788999999999999998
Q ss_pred cchHHHHH
Q 036361 282 GAPVVLNM 289 (485)
Q Consensus 282 ~~p~~~~~ 289 (485)
........
T Consensus 126 ~~~~~~~~ 133 (557)
T PRK07059 126 VLENFATT 133 (557)
T ss_pred EchhhHHH
Confidence 87665443
No 227
>PRK07470 acyl-CoA synthetase; Validated
Probab=49.28 E-value=2.7e+02 Score=28.13 Aligned_cols=89 Identities=17% Similarity=0.110 Sum_probs=57.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEec-CCCCCHHHHHHHhhhcCCcEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI-NTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l-~~~~~~~~l~~~l~~~~~~~ii 116 (485)
..+|+..+...+......+. .++.++|++..+.|-+-.+-...+..+..|+..+.+ ....+++.+...+++.++..++
T Consensus 181 v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~ 259 (528)
T PRK07470 181 AVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLPSERFDPAEVWALVERHRVTNLF 259 (528)
T ss_pred EEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEecccCcCHHHHHHHHHhcCCeEEe
Confidence 45888888644333221111 267888988888886644333333334455555444 3456788899999999999999
Q ss_pred EcCcchHHHHH
Q 036361 117 VDHLHSSLVLE 127 (485)
Q Consensus 117 ~~~~~~~~~~~ 127 (485)
..+.....+.+
T Consensus 260 ~~P~~~~~l~~ 270 (528)
T PRK07470 260 TVPTILKMLVE 270 (528)
T ss_pred chHHHHHHHHh
Confidence 98877766543
No 228
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=48.78 E-value=2.7e+02 Score=28.92 Aligned_cols=100 Identities=6% Similarity=-0.078 Sum_probs=67.7
Q ss_pred CCCcEEEEec--CCCCCCcccEEeccHHHHHHHHHHHHHh--CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec-c
Q 036361 187 EWDPMVLNYT--SGTTSSPKGVVHSHRGIFILTANALIDW--AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL-R 261 (485)
Q Consensus 187 ~~~~~~i~~T--SGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 261 (485)
++.++++... .+++|. ...+|...+...+..+...+ .+.++|++...++....+ +..+++++..|+..+.+ +
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~~~~~gd~V~l~~~n~~e~-~~~~lA~~~aG~v~vpl~~ 124 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQVAGPGDRVAILAPQGIDY-VAGFFAAIKAGTIAVPLFA 124 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHHhcCCCCEEEEECCCChhH-HHHHHHHHHcCceeEecCC
Confidence 4567765432 112232 34688888877766655443 267889999888877543 34467888888887755 3
Q ss_pred -cCC--HHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 -RFD--ASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 -~~~--~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
.+. +.++...++..++..++..+.....
T Consensus 125 ~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~ 155 (612)
T PRK12476 125 PELPGHAERLDTALRDAEPTVVLTTTAAAEA 155 (612)
T ss_pred CCcchhHHHHHHHHHhCCCCEEEEcHHHHHH
Confidence 222 6789999999999999988766544
No 229
>PRK13383 acyl-CoA synthetase; Provisional
Probab=48.69 E-value=1.3e+02 Score=30.29 Aligned_cols=83 Identities=12% Similarity=0.056 Sum_probs=62.2
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+...... .++.+++++...++..-.+ ...+++++..|+..+..+ .+.+..+...+++.++..++.
T Consensus 60 ~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~ 138 (516)
T PRK13383 60 ALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGF-VTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTVVA 138 (516)
T ss_pred cEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEE
Confidence 47777777666555554 4678899988888755443 334678888888888775 578899999999999999998
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.+...+.+
T Consensus 139 ~~~~~~~~ 146 (516)
T PRK13383 139 DNEFAERI 146 (516)
T ss_pred chhHHHHH
Confidence 87766554
No 230
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=48.64 E-value=1.1e+02 Score=31.24 Aligned_cols=83 Identities=11% Similarity=0.013 Sum_probs=62.9
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+...... .++.++|++....+....+ +..+++++..|+..+..+ .+.+..+...+++.++..++.
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 135 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQH-IVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIV 135 (573)
T ss_pred cccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEe
Confidence 47888887766555443 4688899999888876653 344678888888887765 578999999999999999998
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.......+
T Consensus 136 ~~~~~~~~ 143 (573)
T PRK05605 136 WDKVAPTV 143 (573)
T ss_pred chhhHHHH
Confidence 77765544
No 231
>PRK06164 acyl-CoA synthetase; Validated
Probab=47.69 E-value=1.4e+02 Score=30.33 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=69.6
Q ss_pred CCCcEEEeC--C-------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHhhhccCceEEecCCC
Q 036361 28 SDCPSIVYN--N-------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV-PSMYELQFGVPMSGAILNNINTR 97 (485)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~-~~~~~~~lA~~~~G~~~v~l~~~ 97 (485)
++.++++.. + ..+|+..+...+..++..+ ++.+++++...+|-+ .-.+..+++.+..|+..+.. +.
T Consensus 180 ~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~ 255 (540)
T PRK06164 180 PDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE-PV 255 (540)
T ss_pred CCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec-CC
Confidence 456666652 1 4688888877666555444 788999998887764 33345678888899888766 45
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 98 LDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
.....+...+++.++..++..+.....+..
T Consensus 256 ~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 256 FDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred CCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 677888999999999999988776665443
No 232
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=47.21 E-value=92 Score=30.00 Aligned_cols=66 Identities=14% Similarity=0.103 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhh---cCCcEEEEc
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQH---SESKLVFVD 118 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~---~~~~~ii~~ 118 (485)
..+...+...++++||.|.+-.+.. ....-++...|+.++.++.+ .+.+.+...++. -+.++|+..
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~ 128 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPV 128 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEe
Confidence 4444555556789999877766543 33445566788877766542 467778777763 356676643
No 233
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=47.15 E-value=2.1e+02 Score=25.44 Aligned_cols=67 Identities=9% Similarity=-0.042 Sum_probs=47.7
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
.+.+.|..++..|.. ...+-.-..+.++|...|..++.+-|...+......++..+++++.++....
T Consensus 41 ~a~~~g~~~~~~vv~-~ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~~~ 107 (244)
T cd00640 41 LAEEEGKLPKGVIIE-STGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGDFD 107 (244)
T ss_pred HHHHcCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 334444334555544 4446666777788888998888887777777778889999999999987633
No 234
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=47.10 E-value=2.1e+02 Score=26.33 Aligned_cols=64 Identities=9% Similarity=0.092 Sum_probs=48.4
Q ss_pred HHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc
Q 036361 57 SSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 57 ~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
.+.|. ++|+.|+ ....+-.-....++|.+.|..+..+-|...+......++..++++++++...
T Consensus 45 ~~~g~~~~~~~vv-~~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 45 EKRGLLKPGTTII-EPTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 34453 3566654 4677778888888999999988777776666667788999999999998764
No 235
>PRK08162 acyl-CoA synthetase; Validated
Probab=46.85 E-value=1.2e+02 Score=30.74 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=63.5
Q ss_pred EeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+......+ ++.+++++....+-...+ +..+++++..|+..+..+ .+...++...++..+++.++.
T Consensus 43 ~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~ 121 (545)
T PRK08162 43 RRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAM-VEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIV 121 (545)
T ss_pred EEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEEEE
Confidence 588888887776665544 688899998888876543 334678888888777665 578899999999999999998
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.+.....+
T Consensus 122 ~~~~~~~~ 129 (545)
T PRK08162 122 DTEFAEVA 129 (545)
T ss_pred ccchhhHH
Confidence 87665543
No 236
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=46.73 E-value=1.6e+02 Score=29.84 Aligned_cols=77 Identities=9% Similarity=-0.006 Sum_probs=57.8
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|.+.+...+...... .++.+++++...+|....+ +..+++++..|+..+..+ .+...++...++..++..++
T Consensus 48 ~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~ 126 (547)
T PRK06087 48 ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEF-TIIYLACLKVGAVSVPLLPSWREAELVWVLNKCQAKMFF 126 (547)
T ss_pred CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccchhcCHHHHHHHHHhcCCeEEE
Confidence 357888887766555544 4788999998887765543 345678888999887765 46788899999999998887
Q ss_pred cc
Q 036361 282 GA 283 (485)
Q Consensus 282 ~~ 283 (485)
..
T Consensus 127 ~~ 128 (547)
T PRK06087 127 AP 128 (547)
T ss_pred Ee
Confidence 64
No 237
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=46.54 E-value=1.5e+02 Score=27.35 Aligned_cols=89 Identities=11% Similarity=0.079 Sum_probs=58.0
Q ss_pred CCcEEEeCCeeeeHH-HHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 29 DCPSIVYNNTTYTWS-ETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 29 ~~~a~~~~~~~~Ty~-~l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
.++.+......-|-. ..+.....+...+ +.| +.+|+.|+- ...+-.-....++|.+.|..+..+-|...+......
T Consensus 23 ~~i~~K~E~~nptGS~K~R~a~~~v~~a~-~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~ 100 (290)
T TIGR01138 23 SEVWLKLEGNNPAGSVKDRPALSMIVEAE-KRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAA 100 (290)
T ss_pred CeEEEEEccCCCCccHHHHHHHHHHHHHH-HcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHH
Confidence 355555554333321 1222233333333 344 477876644 666777777888888999988887777666677788
Q ss_pred hhhcCCcEEEEcC
Q 036361 107 LQHSESKLVFVDH 119 (485)
Q Consensus 107 l~~~~~~~ii~~~ 119 (485)
++..++++++++.
T Consensus 101 ~~~~GA~v~~v~~ 113 (290)
T TIGR01138 101 MRAYGAELILVTK 113 (290)
T ss_pred HHHcCCEEEEeCC
Confidence 9999999999975
No 238
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=46.20 E-value=1.7e+02 Score=28.80 Aligned_cols=85 Identities=9% Similarity=0.013 Sum_probs=51.7
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCC
Q 036361 59 VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKR 138 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~ 138 (485)
.|+.+|++++++......+.-. +......+...+...+.++....|+..+|.++++.++....+.+...........
T Consensus 138 ~g~~~g~r~a~~~~~~~~ly~~---~~~~~~~~~~~~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l~~~~ 214 (430)
T TIGR02304 138 DGLFAKHRIAFFLRADNNLYQS---VNNRWISLDFFDLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGELTIKP 214 (430)
T ss_pred cccccCCcEEEEEccChhHHHH---HHhccceeeecCCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCCCCCc
Confidence 3889999999995333322221 1222322344444467888899999999999999988776655544332211234
Q ss_pred CeEEEecC
Q 036361 139 PHLVLVDD 146 (485)
Q Consensus 139 ~~~i~~~~ 146 (485)
+.+++.++
T Consensus 215 k~ii~~~E 222 (430)
T TIGR02304 215 KKVISVAE 222 (430)
T ss_pred eEEEEccC
Confidence 45555544
No 239
>PLN02479 acetate-CoA ligase
Probab=46.20 E-value=2.4e+02 Score=28.92 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=61.2
Q ss_pred EeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+......+ ++.++|++....+....+ +...++++..|+..+..+ .+...++...+++.++..++.
T Consensus 45 ~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~ 123 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAM-YEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMV 123 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHH-HHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEEEE
Confidence 578888877766665544 788999999888865543 334678888888887775 577889999999999999998
Q ss_pred chHHH
Q 036361 283 APVVL 287 (485)
Q Consensus 283 ~p~~~ 287 (485)
.+..+
T Consensus 124 ~~~~~ 128 (567)
T PLN02479 124 DQEFF 128 (567)
T ss_pred chhhh
Confidence 76654
No 240
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=45.92 E-value=1.5e+02 Score=34.40 Aligned_cols=97 Identities=10% Similarity=-0.091 Sum_probs=67.0
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++...+..........+|++.+...+...... .++.+++++...++-...+ ...+++++..|+..+.++
T Consensus 249 ~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~-i~~~lA~l~~G~~~vpldp 327 (1389)
T TIGR03443 249 HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDL-VVAVMGVLKAGATFSVIDP 327 (1389)
T ss_pred CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHH-HHHHHHHHhhCcEEeccCC
Confidence 46677776533211111123468999988777666554 3688999998888876554 345788889999888776
Q ss_pred cCCHHHHHHHHHhcCceeeecc
Q 036361 262 RFDASAISDLIQKHNVTHMCGA 283 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~ 283 (485)
...+.++...++..++..++..
T Consensus 328 ~~p~~~~~~~l~~~~~~~li~~ 349 (1389)
T TIGR03443 328 AYPPARQTIYLSVAKPRALIVI 349 (1389)
T ss_pred CCcHHHHHHHHHhcCCCEEEEe
Confidence 4667788888998888887754
No 241
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=45.80 E-value=97 Score=29.89 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=37.8
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEE
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii 116 (485)
..+...|...++++||.|.+-.+. +.....++...|+.++.++.+ .+.+.+...+.. +.++|+
T Consensus 59 ~al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 59 AGMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 334444555678889987765443 333344556678887776532 356677776653 456665
No 242
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=45.42 E-value=1.1e+02 Score=30.28 Aligned_cols=12 Identities=25% Similarity=0.501 Sum_probs=6.4
Q ss_pred CHHHHHHHHHhc
Q 036361 264 DASAISDLIQKH 275 (485)
Q Consensus 264 ~~~~~~~~i~~~ 275 (485)
+...+.+.++++
T Consensus 299 Na~~la~~L~~~ 310 (432)
T PRK06702 299 NALAVAKWLADH 310 (432)
T ss_pred HHHHHHHHHHhC
Confidence 445555555554
No 243
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=45.36 E-value=1.6e+02 Score=30.07 Aligned_cols=80 Identities=9% Similarity=-0.030 Sum_probs=59.6
Q ss_pred EEeccHHHHHHHHHHHHHh----CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceee
Q 036361 206 VVHSHRGIFILTANALIDW----AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHM 280 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~ 280 (485)
..+|...+...+..+...+ ++.++|++...++....+ ...+++++..|+..+..+ .+...++...++..++..+
T Consensus 48 ~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~-~~~~la~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~ 126 (562)
T PRK12492 48 VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQY-PIAVFGALRAGLIVVNTNPLYTAREMRHQFKDSGARAL 126 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeccCccCCHHHHHHHHhccCceEE
Confidence 3688888877766655443 678899998887766543 344678888888877665 5678899999999999998
Q ss_pred ecchHH
Q 036361 281 CGAPVV 286 (485)
Q Consensus 281 ~~~p~~ 286 (485)
+..+.+
T Consensus 127 i~~~~~ 132 (562)
T PRK12492 127 VYLNMF 132 (562)
T ss_pred Eecccc
Confidence 876543
No 244
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=45.09 E-value=1.1e+02 Score=31.18 Aligned_cols=78 Identities=6% Similarity=-0.050 Sum_probs=59.7
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+..+... .++.++|++...++....+ ...+++++..|+..+.++ .+.+.++...+++.+++.++.
T Consensus 32 ~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~-~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~ 110 (563)
T PLN02860 32 RRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLY-LEWLLAVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVT 110 (563)
T ss_pred eeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEE
Confidence 57888887766555543 4788999999888876554 334678888888888775 578899999999999999887
Q ss_pred chH
Q 036361 283 APV 285 (485)
Q Consensus 283 ~p~ 285 (485)
.+.
T Consensus 111 ~~~ 113 (563)
T PLN02860 111 DET 113 (563)
T ss_pred ecc
Confidence 653
No 245
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=45.07 E-value=1.5e+02 Score=30.29 Aligned_cols=82 Identities=10% Similarity=0.020 Sum_probs=61.6
Q ss_pred EeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 207 VHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
.+|+..+...+..+.. ..++.+++++...++....+ ...+++++..|+..+..+ .+.+.++...+++.+++.++
T Consensus 50 ~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi 128 (560)
T PRK08751 50 TITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY-PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLV 128 (560)
T ss_pred eeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHH-HHHHHHHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEE
Confidence 5788888776655554 35788899998888766553 344678888898888665 57888999999999999999
Q ss_pred cchHHHHH
Q 036361 282 GAPVVLNM 289 (485)
Q Consensus 282 ~~p~~~~~ 289 (485)
........
T Consensus 129 ~~~~~~~~ 136 (560)
T PRK08751 129 VIDNFGTT 136 (560)
T ss_pred EcchhHHH
Confidence 87665543
No 246
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=45.00 E-value=1.6e+02 Score=31.38 Aligned_cols=92 Identities=9% Similarity=0.035 Sum_probs=63.2
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (485)
.++.+|++.. +..+|++.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+..+..+
T Consensus 363 ~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~~~ 439 (718)
T PRK08043 363 QPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYP 439 (718)
T ss_pred CCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEEeC
Confidence 3456666542 246899888776665543 34789999988877752 344456778888999888765
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcc
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
.......+...+.+.++..++..+..
T Consensus 440 ~~~~~~~~~~~i~~~~vt~~~~~p~~ 465 (718)
T PRK08043 440 SPLHYRIVPELVYDRNCTVLFGTSTF 465 (718)
T ss_pred CcccHHHHHHHHHhcCCeEEEchHHH
Confidence 44445566777888888888776543
No 247
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=44.90 E-value=1e+02 Score=29.02 Aligned_cols=61 Identities=18% Similarity=0.189 Sum_probs=47.4
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.|++.+++||++|+|..--+.-....++|-. .|+.++.++.... -....++.+++.++...
T Consensus 158 alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka-~ga~Via~~~~~~---K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 158 ALKKANVKPGKWVAVVGAGGLGHMAVQYAKA-MGAEVIAITRSEE---KLELAKKLGADHVINSS 218 (339)
T ss_pred ehhhcCCCCCCEEEEECCcHHHHHHHHHHHH-cCCeEEEEeCChH---HHHHHHHhCCcEEEEcC
Confidence 3555789999999999888999999999864 4588888875433 34456778899999865
No 248
>PRK10717 cysteine synthase A; Provisional
Probab=44.69 E-value=1.5e+02 Score=28.00 Aligned_cols=88 Identities=10% Similarity=-0.030 Sum_probs=57.3
Q ss_pred CcEEEeCCee--eeHHHHHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 30 CPSIVYNNTT--YTWSETHRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 30 ~~a~~~~~~~--~Ty~~l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
++.+.....+ -|++. +.....+...+ +.| +++|+.|. ....+-.-..+.++|.+.|..+..+-|...+......
T Consensus 29 ~i~~K~E~~nptGS~K~-Rga~~~v~~a~-~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~ 105 (330)
T PRK10717 29 EILGKAEFLNPGGSVKD-RAALNIIWDAE-KRGLLKPGGTIV-EGTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDL 105 (330)
T ss_pred eEEEEeeccCCCCCchH-HHHHHHHHHHH-HcCCCCCCCEEE-EeCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHH
Confidence 4555554433 33322 22233333333 344 46777654 4666777777888888999887777776666777889
Q ss_pred hhhcCCcEEEEcCc
Q 036361 107 LQHSESKLVFVDHL 120 (485)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (485)
++..++++++++..
T Consensus 106 ~~~~GA~V~~~~~~ 119 (330)
T PRK10717 106 LRALGAELVLVPAA 119 (330)
T ss_pred HHHcCCEEEEeCCc
Confidence 99999999999853
No 249
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=44.39 E-value=3.4e+02 Score=27.08 Aligned_cols=86 Identities=10% Similarity=-0.014 Sum_probs=62.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCCC--CCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINTR--LDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (485)
..+|++.+...+..+... .++..++++....|-.. ..+..+++++..|+..+..++. .....+...+...++..
T Consensus 159 v~~s~~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 235 (502)
T TIGR01734 159 VQISHDNLVSFTNWMLAD---FPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNV 235 (502)
T ss_pred EEEecHHHHHHHHHHHHh---CCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeE
Confidence 468999887666544333 57888888877766643 3345677889999999888654 35677888899999999
Q ss_pred EEEcCcchHHHH
Q 036361 115 VFVDHLHSSLVL 126 (485)
Q Consensus 115 ii~~~~~~~~~~ 126 (485)
+...+...+.+.
T Consensus 236 ~~~~p~~~~~~l 247 (502)
T TIGR01734 236 WVSTPSFVDMCL 247 (502)
T ss_pred EEEChhHHHHHH
Confidence 988877665443
No 250
>PRK06381 threonine synthase; Validated
Probab=44.37 E-value=2.1e+02 Score=26.71 Aligned_cols=97 Identities=8% Similarity=0.012 Sum_probs=60.9
Q ss_pred HHHHHhhcC-CCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC
Q 036361 20 LERAATAYS-DCPSIVYNNT--TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT 96 (485)
Q Consensus 20 l~~~a~~~p-~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~ 96 (485)
+.+-.+..+ .++.+-..+. +=|+++ +. +..+...+.+.|. ++| +....+-.-..+.++|...|..+..+-|
T Consensus 21 ~~~l~~~~G~~~i~~K~E~~nptGS~K~-R~-a~~~l~~a~~~g~---~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp 94 (319)
T PRK06381 21 ARKLEEELGLRKIYLKFEGANPTGTQKD-RI-AEAHVRRAMRLGY---SGI-TVGTCGNYGASIAYFARLYGLKAVIFIP 94 (319)
T ss_pred hHhhHHhcCCceEEEEecCCCCccCcHH-HH-HHHHHHHHHHcCC---CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEEC
Confidence 344344443 3567666553 333433 22 2222223344443 334 4566778888888899999988877766
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 97 RLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
...+......++..++++++++....
T Consensus 95 ~~~~~~~~~~l~~~GA~V~~~~~~~~ 120 (319)
T PRK06381 95 RSYSNSRVKEMEKYGAEIIYVDGKYE 120 (319)
T ss_pred CCCCHHHHHHHHHcCCEEEEcCCCHH
Confidence 66666667789999999999987543
No 251
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=44.22 E-value=1.7e+02 Score=30.31 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=72.8
Q ss_pred HhhcCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH-HhhhccCceEEe
Q 036361 24 ATAYSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ-FGVPMSGAILNN 93 (485)
Q Consensus 24 a~~~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~-lA~~~~G~~~v~ 93 (485)
....||.+|.+.. +.-+||+.|..++..+.+.+. -++++|++.-++|-.-=+=-++ +++...|.+.+.
T Consensus 186 ~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~--~~~~~d~~LsfLPlaHi~Er~~~~~~~~~~g~~~~ 263 (613)
T COG1022 186 APPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLP--PIGPGDRVLSFLPLAHIFERAFEGGLALYGGVTVL 263 (613)
T ss_pred CCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCC--CCCCCcEEEEeCcHHHHHHHHHHHHHHhhcceEEE
Confidence 3456788887652 256999999999998877765 4889999999999763332222 444444444443
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHh
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEAL 129 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (485)
. ..++..+..-++..+|.+++.-+-..+.+.+..
T Consensus 264 ~--~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I 297 (613)
T COG1022 264 F--KEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGI 297 (613)
T ss_pred e--cCCHHHHHHHHHHhCCeEEeechHHHHHHHHHH
Confidence 3 345778899999999999999888777766543
No 252
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=43.83 E-value=52 Score=24.54 Aligned_cols=53 Identities=4% Similarity=-0.206 Sum_probs=38.7
Q ss_pred eeeeHHHHHHHH----HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 38 TTYTWSETHRRC----LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 38 ~~~Ty~~l~~~~----~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+.+.++.+.. ..+...+...++.+++.|.++|.++.....+...+..+|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 346666665432 35666666678888999999999988877777888888864
No 253
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=43.78 E-value=2.3e+02 Score=26.56 Aligned_cols=90 Identities=8% Similarity=-0.012 Sum_probs=59.2
Q ss_pred CCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHH
Q 036361 28 SDCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSV 105 (485)
Q Consensus 28 p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (485)
+.++.+.... .+-|+++ +.....+.... +.|..+++.|.... .+-.-..+.++|...|..++.+-|...+.....
T Consensus 15 g~~i~~K~E~~nptGS~K~-R~a~~~l~~a~-~~g~~~~~~vv~aS-sGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~ 91 (316)
T cd06448 15 GCNVFLKLENLQPSGSFKI-RGIGHLCQKSA-KQGLNECVHVVCSS-GGNAGLAAAYAARKLGVPCTIVVPESTKPRVVE 91 (316)
T ss_pred CCeEEEEeccCCCcCChHH-HHHHHHHHHHH-HhhcccCCeEEEeC-CcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHH
Confidence 3456665544 3344443 22233333333 33444566665544 567777788889999999888888777777888
Q ss_pred HhhhcCCcEEEEcCc
Q 036361 106 LLQHSESKLVFVDHL 120 (485)
Q Consensus 106 ~l~~~~~~~ii~~~~ 120 (485)
.++..++++++++..
T Consensus 92 ~l~~~GA~v~~~~~~ 106 (316)
T cd06448 92 KLRDEGATVVVHGKV 106 (316)
T ss_pred HHHHcCCEEEEECCc
Confidence 999999999999865
No 254
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=43.28 E-value=2.8e+02 Score=31.98 Aligned_cols=98 Identities=10% Similarity=-0.019 Sum_probs=69.5
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH-HHHHhhhccCceEEecCC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY-ELQFGVPMSGAILNNINT 96 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~-~~~lA~~~~G~~~v~l~~ 96 (485)
.|+.+|++.. +..+|.+.+........ ...+++++|++....+-+.+.- .-+++.+..|+..+..++
T Consensus 596 ~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~ 672 (1296)
T PRK10252 596 QPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMAEP 672 (1296)
T ss_pred CCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEECCh
Confidence 3566666542 24688888766554432 3468999999998888765543 346777889999887765
Q ss_pred C--CCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 97 R--LDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 97 ~--~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
. ..++.+...+++.++..+...+.....+..
T Consensus 673 ~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~ 705 (1296)
T PRK10252 673 EAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVA 705 (1296)
T ss_pred hccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHh
Confidence 3 467888999999999999888766655443
No 255
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=43.28 E-value=2.7e+02 Score=31.59 Aligned_cols=97 Identities=10% Similarity=0.073 Sum_probs=69.0
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~ 95 (485)
.++.+|.+.. ...+|.+.+...+..... ..++.++|++...+|-. ..+....++.+..|+..+...
T Consensus 780 ~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~~~ 856 (1146)
T PRK08633 780 KPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVYHP 856 (1146)
T ss_pred CCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEEeC
Confidence 3566666652 246899888776665533 35688899887776643 233344677778898888776
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHH
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVL 126 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (485)
...+.+.+...+++.++..+...+.....+.
T Consensus 857 ~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 887 (1146)
T PRK08633 857 DPTDALGIAKLVAKHRATILLGTPTFLRLYL 887 (1146)
T ss_pred CCCCHHHHHHHHHHcCCeEEEecHHHHHHHH
Confidence 6677888999999999999999887665544
No 256
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=42.92 E-value=88 Score=30.92 Aligned_cols=56 Identities=18% Similarity=0.270 Sum_probs=35.2
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEEc
Q 036361 59 VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (485)
.++++||.|.+-.+... ....++...|+.+++++.+ .+.+.+...+.. +.++|++.
T Consensus 106 ~~~~pGd~VIv~~~t~~---a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~-~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGFP---TTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVSP-KTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcCc-CCeEEEEe
Confidence 37889998877655543 3345555678887766543 356667666643 56666664
No 257
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=42.80 E-value=2.5e+02 Score=28.42 Aligned_cols=95 Identities=17% Similarity=0.105 Sum_probs=64.8
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.++++..-... .....+|...+...+..+... .++.+++++....+-...+ ....++++..|+..+..+ .
T Consensus 36 p~~~a~~~~~~~~---~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~ 111 (538)
T TIGR03208 36 PDKPALTAYRDGH---GAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEF-TALYLACARIGAVLNPLMPI 111 (538)
T ss_pred CCceEEEeecccC---CCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHhcCEEEeccCcc
Confidence 4456665432111 113468888887766555544 4678899998888765543 344678888888877665 4
Q ss_pred CCHHHHHHHHHhcCceeeecchH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
..+.++...++..+++.++..+.
T Consensus 112 ~~~~~l~~~l~~~~~~~li~~~~ 134 (538)
T TIGR03208 112 FRERELSFMLNHADSKVFVVPSV 134 (538)
T ss_pred cCHHHHHHHHHhcCCeEEEEccc
Confidence 67888999999999998887553
No 258
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=42.07 E-value=3.8e+02 Score=27.16 Aligned_cols=87 Identities=14% Similarity=0.049 Sum_probs=63.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH---HHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY---ELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~---~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (485)
..+|...+...+.... ...++.++|++...+|-.-.+- ...++++..|+..+.. +...+.....++++.++..
T Consensus 200 V~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~l~~~~~t~ 275 (536)
T PRK10946 200 IPRTHNDYYYSVRRSV---EICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVVLA-PDPSATLCFPLIEKHQVNV 275 (536)
T ss_pred EEEehHHHHHHHHHHH---HhcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEEEC-CCCCHHHHHHHHHHhCCcE
Confidence 5689999888666543 3357889998888777543322 2467888899988765 4446677788899999999
Q ss_pred EEEcCcchHHHHHH
Q 036361 115 VFVDHLHSSLVLEA 128 (485)
Q Consensus 115 ii~~~~~~~~~~~~ 128 (485)
+...+.....+...
T Consensus 276 ~~~~p~~~~~l~~~ 289 (536)
T PRK10946 276 TALVPPAVSLWLQA 289 (536)
T ss_pred EEeChHHHHHHHhh
Confidence 99988776665443
No 259
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=41.98 E-value=47 Score=31.17 Aligned_cols=52 Identities=10% Similarity=0.112 Sum_probs=42.2
Q ss_pred eeeHHHHHHH------HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 39 TYTWSETHRR------CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 39 ~~Ty~~l~~~------~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.+.|.++.+. ...+...+.+.|+.+++.|.++|.++......++++-.+|..
T Consensus 238 nip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 238 CVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred ccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 4667766442 456777788889999999999999999999999999999964
No 260
>PRK13382 acyl-CoA synthetase; Provisional
Probab=41.80 E-value=2e+02 Score=29.20 Aligned_cols=81 Identities=10% Similarity=0.031 Sum_probs=60.4
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..+... .++.+++++...++.... .+..+++++..|+..+..+ .+...++...+++.+++.++.
T Consensus 68 ~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 146 (537)
T PRK13382 68 TLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRG-FVEALLAANRIGADILLLNTSFAGPALAEVVTREGVDTVIY 146 (537)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHH-HHHHHHHHHHcCcEEEecCcccCHHHHHHHHHhcCCCEEEE
Confidence 57888877666555554 467889999888876655 2445678888898888775 467889999999999999887
Q ss_pred chHHHH
Q 036361 283 APVVLN 288 (485)
Q Consensus 283 ~p~~~~ 288 (485)
......
T Consensus 147 ~~~~~~ 152 (537)
T PRK13382 147 DEEFSA 152 (537)
T ss_pred chhhHH
Confidence 655443
No 261
>PRK13390 acyl-CoA synthetase; Provisional
Probab=41.73 E-value=3.3e+02 Score=27.17 Aligned_cols=92 Identities=10% Similarity=-0.014 Sum_probs=64.4
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.++++.... | ..+|...+...+..+... .++.++|++....+....+ +..+++++..|+..+..+
T Consensus 10 ~p~~~a~~~~~~---~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~-~~~~la~~~~Ga~~~~l~~ 81 (501)
T PRK13390 10 APDRPAVIVAET---G----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEA-LVVLWAALRSGLYITAINH 81 (501)
T ss_pred CCCCcEEEecCC---C----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEecccc
Confidence 355666654221 2 358888887776665554 4688999988887766553 344678888888877665
Q ss_pred cCCHHHHHHHHHhcCceeeecchH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
.+.+.++...++..++..++....
T Consensus 82 ~~~~~~~~~~~~~~~~~~~i~~~~ 105 (501)
T PRK13390 82 HLTAPEADYIVGDSGARVLVASAA 105 (501)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcch
Confidence 577888999999888888876543
No 262
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=41.35 E-value=72 Score=27.25 Aligned_cols=55 Identities=20% Similarity=0.194 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 45 THRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 45 l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
..+|.+.+++.+.+ +++++||...++.. .|-.++|++ +....++-++++|.+..-
T Consensus 85 ~lErieg~~~~~l~~~~i~~~DVliviSn--------------SGrNpvpie-------~A~~~rekGa~vI~vTSl 140 (243)
T COG4821 85 YLERIEGYAKLFLHRLQIRPNDVLIVISN--------------SGRNPVPIE-------VAEYAREKGAKVIAVTSL 140 (243)
T ss_pred hhHhhhhHHHHHHHHhcCCCCCEEEEEeC--------------CCCCCcchH-------HHHHHHhcCCeEEEEehh
Confidence 46677788887766 79999998888766 566666663 566777788888888653
No 263
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=41.15 E-value=2.7e+02 Score=28.26 Aligned_cols=83 Identities=10% Similarity=-0.059 Sum_probs=61.1
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|...+...+...... .++.+++++...++....+- ..+++++..|+..+..+ .+.+.++...++..++..++
T Consensus 38 ~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~-~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~ 116 (542)
T PRK06018 38 VRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHL-EAWYGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVI 116 (542)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHH-HHHHHHHhcCeEeeccccccCHHHHHHHHhccCCCEEE
Confidence 467888887776666554 46888999888877665542 34677888888877765 56788999999999999988
Q ss_pred cchHHHHH
Q 036361 282 GAPVVLNM 289 (485)
Q Consensus 282 ~~p~~~~~ 289 (485)
........
T Consensus 117 ~~~~~~~~ 124 (542)
T PRK06018 117 TDLTFVPI 124 (542)
T ss_pred EccccHHH
Confidence 76554433
No 264
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=40.89 E-value=1.6e+02 Score=22.51 Aligned_cols=40 Identities=3% Similarity=0.067 Sum_probs=33.3
Q ss_pred HHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 80 LQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
....+-..|.-++.+.+..+.+++...+.+.++++|..+.
T Consensus 19 ~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~ 58 (119)
T cd02067 19 VARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSG 58 (119)
T ss_pred HHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEec
Confidence 3344445888889999999999999999999999998874
No 265
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=40.66 E-value=4.4e+02 Score=27.41 Aligned_cols=99 Identities=4% Similarity=-0.130 Sum_probs=64.0
Q ss_pred CCCcEEEEec--CCCCCCcccEEeccHHHHHHHHHHHHHh--CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec-c
Q 036361 187 EWDPMVLNYT--SGTTSSPKGVVHSHRGIFILTANALIDW--AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL-R 261 (485)
Q Consensus 187 ~~~~~~i~~T--SGtTG~pK~v~~s~~~~~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~ 261 (485)
++.++++... .+..|. ...+|.+.+...+..+...+ .+.++|++...++....+ +..+++++..|+..+-+ +
T Consensus 35 ~~~~a~~~~~~~~~~~~~--~~~~Ty~el~~~v~~lA~~L~~~~~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~ 111 (631)
T PRK07769 35 GDKLAYRFLDFSTERDGV--ARDLTWSQFGARNRAVGARLQQVTKPGDRVAILAPQNLDY-LIAFFGALYAGRIAVPLFD 111 (631)
T ss_pred CCCeEEEEeccCCCCCCc--eeEeeHHHHHHHHHHHHHHHHHhcCCCCEEEEEcCCChHH-HHHHHHHHHcCCEEEeeCC
Confidence 4466665432 112221 34678888877665554433 267889998888876543 33467788888877654 3
Q ss_pred cCC---HHHHHHHHHhcCceeeecchHHHH
Q 036361 262 RFD---ASAISDLIQKHNVTHMCGAPVVLN 288 (485)
Q Consensus 262 ~~~---~~~~~~~i~~~~~t~~~~~p~~~~ 288 (485)
... ..++...++..++..++.......
T Consensus 112 ~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~ 141 (631)
T PRK07769 112 PAEPGHVGRLHAVLDDCTPSAILTTTDSAE 141 (631)
T ss_pred CCccchHHHHHHHHHhCCCCEEEEChHHHH
Confidence 222 467888999999999988776544
No 266
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=39.57 E-value=31 Score=23.76 Aligned_cols=30 Identities=17% Similarity=0.297 Sum_probs=17.1
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Q 036361 40 YTWSETHRRCLQVASSLSSVGIQRGHVVSV 69 (485)
Q Consensus 40 ~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l 69 (485)
+.|-+-.-+...+-..|.+.|+++||.|-|
T Consensus 33 ~~rf~~~L~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 33 LRRFQRKLKKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHHHHHHHHHTTHHHHHHTTT--TT-EEEE
T ss_pred HHHHHHHHHHCCHHHHHHHcCCCCCCEEEE
Confidence 333333334445566788889999999976
No 267
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=39.39 E-value=2e+02 Score=28.92 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=61.3
Q ss_pred EeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..... ..++.+++++....+..... ...+++++..|+..+..+ .+...++...++..+++.++.
T Consensus 11 ~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 11 RRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAF-FEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 5677777665555444 45788999998888766553 344677888888877775 577889999999999999998
Q ss_pred chHHHHHH
Q 036361 283 APVVLNMI 290 (485)
Q Consensus 283 ~p~~~~~l 290 (485)
.....+.+
T Consensus 90 ~~~~~~~~ 97 (509)
T PRK12406 90 HADLLHGL 97 (509)
T ss_pred ccchhhhh
Confidence 77666554
No 268
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=39.26 E-value=37 Score=23.37 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=15.2
Q ss_pred HHHHHHHcCCCCCCEEEEE
Q 036361 52 VASSLSSVGIQRGHVVSVV 70 (485)
Q Consensus 52 lA~~L~~~gi~~gd~V~l~ 70 (485)
+-..|.+.|+++||.|-|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456777899999999875
No 269
>PLN02356 phosphateglycerate kinase
Probab=38.90 E-value=1.9e+02 Score=28.45 Aligned_cols=63 Identities=17% Similarity=0.056 Sum_probs=46.9
Q ss_pred HHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 56 LSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 56 L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+.+.|. ++|..|+ ....+-.-+...++|...|..++.+-|...+.+-..+++..+++++.++.
T Consensus 95 a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 95 ALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 334444 4676544 45666668888889999999888777776666677899999999999953
No 270
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=38.67 E-value=2.5e+02 Score=24.06 Aligned_cols=110 Identities=11% Similarity=0.094 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhC----CCCCCEEEEecch--hhHhHHHHHHHHHhhcceEeec--ccCCHHHHHHHHHhcCceeeec
Q 036361 211 RGIFILTANALIDWA----VPKQPVYLWTLPM--FHANGWGYTWGMAAVGATNICL--RRFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 211 ~~~~~~~~~~~~~~~----~~~~~~~~~~~p~--~~~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~i~~~~~t~~~~ 282 (485)
+.+..........+. .....+++...+- .|..|...+-..+...+--++. ....++.+.+.+++.+++.+.+
T Consensus 62 ~~~~~~l~~l~~~~~~~~~~~~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~l 141 (197)
T TIGR02370 62 DAMLAGIKVLTPEMEKAVETEVLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTG 141 (197)
T ss_pred HHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEE
Q ss_pred ch------HHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhh
Q 036361 283 AP------VVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 283 ~p------~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
+- ..+..+.+..+...+..--.+++||.++.++..+.+
T Consensus 142 S~~~~~~~~~~~~~i~~l~~~~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 142 SALMTTTMYGQKDINDKLKEEGYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred ccccccCHHHHHHHHHHHHHcCCCCCCEEEEEChhcCHHHHHHh
No 271
>PRK06178 acyl-CoA synthetase; Validated
Probab=38.47 E-value=2.1e+02 Score=29.29 Aligned_cols=84 Identities=12% Similarity=0.061 Sum_probs=63.3
Q ss_pred EeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..... ..++.+++++....+....+ ...+++++..|+..+..+ ......+...+++.++..++.
T Consensus 58 ~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~ 136 (567)
T PRK06178 58 VITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQF-HIVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLA 136 (567)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHH-HHHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 5788888776655544 34678889988888876653 345678888888877665 567889999999999999999
Q ss_pred chHHHHHHh
Q 036361 283 APVVLNMIS 291 (485)
Q Consensus 283 ~p~~~~~l~ 291 (485)
.+.....+.
T Consensus 137 ~~~~~~~l~ 145 (567)
T PRK06178 137 LDQLAPVVE 145 (567)
T ss_pred ccchHHHHH
Confidence 887766543
No 272
>PLN02550 threonine dehydratase
Probab=38.22 E-value=4.4e+02 Score=27.30 Aligned_cols=93 Identities=5% Similarity=-0.060 Sum_probs=61.0
Q ss_pred hcCCCcEEEeCCeee--eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHH
Q 036361 26 AYSDCPSIVYNNTTY--TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNL 103 (485)
Q Consensus 26 ~~p~~~a~~~~~~~~--Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (485)
..+..+.+-..+.+- ||+. +...+++.+.-.+ ..++| .+....+-......++|.++|..+..+=|...+...
T Consensus 121 ~~g~~IylK~E~lqptGSFK~-RGA~n~I~~L~~e-~~~~G---VV~aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~K 195 (591)
T PLN02550 121 RLGVKVLLKREDLQPVFSFKL-RGAYNMMAKLPKE-QLDKG---VICSSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIK 195 (591)
T ss_pred hhCCEEEEEEcCCCCCCcHHH-HHHHHHHHHHHHh-cCCCC---EEEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHH
Confidence 344456665555433 4443 4444444443233 44566 344566777777888999999888777777766666
Q ss_pred HHHhhhcCCcEEEEcCcchH
Q 036361 104 SVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~ 123 (485)
...++..++++++++....+
T Consensus 196 v~~~r~~GAeVvl~g~~~de 215 (591)
T PLN02550 196 WQSVERLGATVVLVGDSYDE 215 (591)
T ss_pred HHHHHHcCCEEEEeCCCHHH
Confidence 78889999999999865444
No 273
>PRK05852 acyl-CoA synthetase; Validated
Probab=38.15 E-value=2.4e+02 Score=28.54 Aligned_cols=87 Identities=11% Similarity=0.098 Sum_probs=61.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEe-cCCCCCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNN-INTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 114 (485)
..+|+..+...+..+... .+++++|++....|-.. .+...+++++..|.+.+. -....++..+...+++.++..
T Consensus 194 v~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITG---YRLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHH---hCCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 458988887766665543 47889998887776543 455567777777776543 233456778888999999999
Q ss_pred EEEcCcchHHHHH
Q 036361 115 VFVDHLHSSLVLE 127 (485)
Q Consensus 115 ii~~~~~~~~~~~ 127 (485)
++..+.....+..
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9988876665543
No 274
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=37.74 E-value=2.2e+02 Score=26.17 Aligned_cols=87 Identities=10% Similarity=0.053 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHH---HHHHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHN---LSVLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii 116 (485)
++.+.++.+.+-+.+.+. .+....+..+...+...++.-.|++-..+..-.--....++.+ +...+++.++++||
T Consensus 152 ~~~~~~~L~~l~~~~~~~l~~~~~~~~~~v~~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 231 (287)
T cd01137 152 AAAYKAKLKALDEWAKAKFATIPAEKRKLVTSEGAFSYFAKAYGLKEAYLWPINTEEEGTPKQVATLIEQVKKEKVPAVF 231 (287)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccCEEEEecccHHHHHHHcCCeEeecccCCCCCCCCHHHHHHHHHHHHHhCCCEEE
Confidence 344555555555555541 3433456777788888998888887776643211122334544 55667888999999
Q ss_pred EcCcchHHHHHH
Q 036361 117 VDHLHSSLVLEA 128 (485)
Q Consensus 117 ~~~~~~~~~~~~ 128 (485)
+++.......+.
T Consensus 232 ~e~~~~~~~~~~ 243 (287)
T cd01137 232 VESTVNDRLMKQ 243 (287)
T ss_pred EeCCCChHHHHH
Confidence 998766654433
No 275
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=37.60 E-value=3.1e+02 Score=28.49 Aligned_cols=94 Identities=1% Similarity=-0.146 Sum_probs=65.4
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR 262 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 262 (485)
.++.++++... ..| ....+|.+.+...+...... .++.+++++...++....+ +...++++..|+..+.++.
T Consensus 52 ~p~~~a~~~~~--~~~--~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~ 126 (614)
T PRK08180 52 APDRVFLAERG--ADG--GWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEH-ALLALAAMYAGVPYAPVSP 126 (614)
T ss_pred CCCCceeeecc--CCC--ceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeecc
Confidence 35566665431 112 23568888888777666554 4688999999888876654 3346788888998887753
Q ss_pred -CC-----HHHHHHHHHhcCceeeecch
Q 036361 263 -FD-----ASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 263 -~~-----~~~~~~~i~~~~~t~~~~~p 284 (485)
+. +.++...++..++..++...
T Consensus 127 ~~~~~~~~~~~l~~~l~~~~~~~li~~~ 154 (614)
T PRK08180 127 AYSLVSQDFGKLRHVLELLTPGLVFADD 154 (614)
T ss_pred ccccccCCHHHHHHHHhcCCCcEEEEcC
Confidence 33 67888999999998888753
No 276
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=37.49 E-value=1.4e+02 Score=28.69 Aligned_cols=55 Identities=2% Similarity=-0.086 Sum_probs=46.9
Q ss_pred EEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 69 VVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 69 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
+++.-+-....+.||+.++|..+..+=|...+....+.++..++.+++.....-+
T Consensus 118 iasSaGNha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~de 172 (457)
T KOG1250|consen 118 IASSAGNHAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWDE 172 (457)
T ss_pred EEecCccHHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHHH
Confidence 4555566778889999999999998889999999999999999999998776544
No 277
>cd00754 MoaD Ubiquitin domain of MoaD-like proteins. MoaD family. Members of this family are involved in biosynthesis of the molybdenum cofactor (Moco), an essential cofactor of a diverse group of redox enzymes. Moco biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and eukaryotes. Moco contains a tricyclic pyranopterin, termed molybdopterin (MPT), that contains the cis-dithiolene group responsible for molybdenum ligation. This dithiolene group is generated by MPT synthase, the second major step in Moco biosynthesis. MPT synthase consists of a large (MoeE) and small (MoaD) subunit. The small subunit is inserted into the lare subunit to form the active site. The small subunit, which is structurally similar to ubiquitin, contains a C-terminal thiocarboxylated glycine residue that serves as a sulfur donor for the synthesis of the MPT dithiolene group.
Probab=37.42 E-value=94 Score=21.74 Aligned_cols=45 Identities=18% Similarity=0.253 Sum_probs=31.1
Q ss_pred CcchhHHHHHHHhhcCC-------CcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 036361 13 PLTTLGFLERAATAYSD-------CPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~-------~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..|+.++++.....+|. ..++..+++.++ .+.-++.||+|+++-|
T Consensus 25 ~~tv~~ll~~l~~~~~~~~~~~~~~~~v~vNg~~v~---------------~~~~l~~gD~v~i~pp 76 (80)
T cd00754 25 GATVGELLDALEARYPGLLEELLARVRIAVNGEYVR---------------LDTPLKDGDEVAIIPP 76 (80)
T ss_pred CCcHHHHHHHHHHHCchHHHhhhhcEEEEECCeEcC---------------CCcccCCCCEEEEeCC
Confidence 57888999888888775 344444554444 2345889999999866
No 278
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=37.10 E-value=2.2e+02 Score=22.83 Aligned_cols=44 Identities=9% Similarity=0.075 Sum_probs=37.7
Q ss_pred hHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 76 SMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 76 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
-..+..+.+-..|.-++-+..+.+++++.....+.+|++|..+.
T Consensus 19 G~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 19 GNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 34445556668999999999999999999999999999999975
No 279
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=36.89 E-value=3.6e+02 Score=28.60 Aligned_cols=88 Identities=5% Similarity=-0.058 Sum_probs=66.1
Q ss_pred ccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec-ccCCHHHHHHHHHhcCcee
Q 036361 204 KGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL-RRFDASAISDLIQKHNVTH 279 (485)
Q Consensus 204 K~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~ 279 (485)
....+|.+.+...+..+... .++.++|++...++-...+ ....++++..|+..+-. +.+.++++...++..++..
T Consensus 118 ~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 196 (700)
T PTZ00216 118 ETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEW-LASIYGIWSQSMVAATVYANLGEDALAYALRETECKA 196 (700)
T ss_pred CceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEeeCCCCCHHHHHhhhhccCccE
Confidence 35688999888777666544 4788999998888865543 23457778888776655 4578899999999999999
Q ss_pred eecchHHHHHHhC
Q 036361 280 MCGAPVVLNMISN 292 (485)
Q Consensus 280 ~~~~p~~~~~l~~ 292 (485)
++.....+..+..
T Consensus 197 lv~~~~~~~~l~~ 209 (700)
T PTZ00216 197 IVCNGKNVPNLLR 209 (700)
T ss_pred EEECHHHHHHHHH
Confidence 9988777666543
No 280
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=36.53 E-value=2.1e+02 Score=28.31 Aligned_cols=87 Identities=7% Similarity=-0.045 Sum_probs=57.7
Q ss_pred CcEEEeCCeeee--HHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 30 CPSIVYNNTTYT--WSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 30 ~~a~~~~~~~~T--y~~l~~~~~~lA~~L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
++.+...+..-| ++. +.....+...+ +.|. .+|+.| +.+..+-.-..+.++|.+.|..+..+=|...+.+....
T Consensus 27 ~i~~K~E~~nptGS~K~-R~a~~~l~~a~-~~g~~~~g~~v-v~~ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~ 103 (454)
T TIGR01137 27 ELLAKCEFFNPGGSVKD-RIALRMIEDAE-ASGRLKPGDTI-IEPTSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDV 103 (454)
T ss_pred eEEEEEhhcCCCcchHH-HHHHHHHHHHH-HcCCCCCCCEE-EEeCCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHH
Confidence 455555543323 322 22233344444 3454 677765 44577778888888999999988777776666667788
Q ss_pred hhhcCCcEEEEcC
Q 036361 107 LQHSESKLVFVDH 119 (485)
Q Consensus 107 l~~~~~~~ii~~~ 119 (485)
++..++++++++.
T Consensus 104 ~~~~GA~v~~~~~ 116 (454)
T TIGR01137 104 LKALGAEIVRTPT 116 (454)
T ss_pred HHHCCCEEEEcCC
Confidence 9999999999975
No 281
>PLN02409 serine--glyoxylate aminotransaminase
Probab=35.68 E-value=2.8e+02 Score=26.97 Aligned_cols=77 Identities=5% Similarity=-0.085 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 43 SETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.++.+...++...|.+ .|.++++.|.+-...+.-+..++..++..|-.++..++.........+++..+.+++.+..
T Consensus 38 ~~~~~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 38 PAFPALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 3445555555555555 3665545444444333333344455667777766666665555555667777877777753
No 282
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=35.47 E-value=2.5e+02 Score=28.50 Aligned_cols=82 Identities=11% Similarity=-0.012 Sum_probs=60.7
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+...... .++.+++++...++-...+ +..+++++..|+..+..+ ...+.++...+++.++..++.
T Consensus 42 ~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~-~~~~~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~ 120 (542)
T PRK07786 42 TTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEF-VESVLAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVT 120 (542)
T ss_pred cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEE
Confidence 68888887766655443 4678889988887755543 345778888888888765 467889999999999999888
Q ss_pred chHHHHH
Q 036361 283 APVVLNM 289 (485)
Q Consensus 283 ~p~~~~~ 289 (485)
.+.....
T Consensus 121 ~~~~~~~ 127 (542)
T PRK07786 121 EAALAPV 127 (542)
T ss_pred ccchHHH
Confidence 7665543
No 283
>PF01297 TroA: Periplasmic solute binding protein family; InterPro: IPR006127 This is a family of ABC transporter metal-binding lipoproteins. An example is the periplasmic zinc-binding protein TroA P96116 from SWISSPROT that interacts with an ATP-binding cassette transport system in Treponema pallidum and plays a role in the transport of zinc across the cytoplasmic membrane. Related proteins are found in both Gram-positive and Gram-negative bacteria. ; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2PS9_A 2PS0_A 2OSV_A 2OGW_A 2PS3_A 2PRS_B 3MFQ_C 3GI1_B 2OV3_A 1PQ4_A ....
Probab=35.24 E-value=1.4e+02 Score=26.81 Aligned_cols=86 Identities=17% Similarity=0.233 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHH---HHHHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHN---LSVLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii 116 (485)
++++.++...+.+.+.+. .+ ++ +..+...+..+++.-.|++-..|..-.--....++.+ +...++..++++||
T Consensus 127 ~~~~~~~L~~l~~~~~~~~~~~-~~-~~~v~~h~~~~Y~~~~~gl~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~i~ 204 (256)
T PF01297_consen 127 AEKYLKELDELDAEIKEKLAKL-PG-RPVVVYHDAFQYFAKRYGLKVIGVIEISPGEEPSPKDLAELIKLIKENKVKCIF 204 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTS-SG-GEEEEEESTTHHHHHHTT-EEEEEESSSSSSSS-HHHHHHHHHHHHHTT-SEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-cC-CeEEEEChHHHHHHHhcCCceeeeeccccccCCCHHHHHHHHHHhhhcCCcEEE
Confidence 455666666666666652 23 33 6677788899999999988877765111123334444 45667889999999
Q ss_pred EcCcchHHHHHHh
Q 036361 117 VDHLHSSLVLEAL 129 (485)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (485)
++........+.+
T Consensus 205 ~e~~~~~~~~~~l 217 (256)
T PF01297_consen 205 TEPQFSSKLAEAL 217 (256)
T ss_dssp EETTS-THHHHHH
T ss_pred ecCCCChHHHHHH
Confidence 9987766654444
No 284
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=35.06 E-value=2.5e+02 Score=25.77 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHH---HHHHhhhcCCcEEEEc
Q 036361 42 WSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHN---LSVLLQHSESKLVFVD 118 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~~ 118 (485)
++++.++.+.+-..+.+.--....+..+...+...++.-.|++-..+..-.--....++.+ +...+++.++++||++
T Consensus 156 ~~~~~~~L~~l~~~~~~~~~~~~~~~~v~~H~af~Yl~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e 235 (286)
T cd01019 156 LEAFNARLAELDATIKERLAPVKTKPFFVFHDAYGYFEKRYGLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAE 235 (286)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCeEEEecccHHHHHHHcCCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 3445555555555544421112345666677788888888877655532211123334554 5566778899999998
Q ss_pred CcchHHHHHHhc
Q 036361 119 HLHSSLVLEALS 130 (485)
Q Consensus 119 ~~~~~~~~~~~~ 130 (485)
....+...+.+.
T Consensus 236 ~~~~~~~~~~ia 247 (286)
T cd01019 236 PQFHPKIAETLA 247 (286)
T ss_pred CCCChHHHHHHH
Confidence 877665554443
No 285
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=35.06 E-value=62 Score=22.86 Aligned_cols=40 Identities=15% Similarity=0.042 Sum_probs=34.3
Q ss_pred HHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 53 ASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 53 A~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..+|.+ .||+.|+.++.+.-.-.|.+..+=|.+++.-+-+
T Consensus 3 GsYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 3 GSYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred chhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 356777 7999999999999999999999999999886644
No 286
>cd01016 TroA Metal binding protein TroA. These proteins have been shown to function as initial receptors in ABC transport of Zn2+ and possibly Fe3+ in many eubacterial species. The TroA proteins belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=34.98 E-value=2.6e+02 Score=25.58 Aligned_cols=87 Identities=16% Similarity=0.158 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHH---HHHHHhhhcCCcEEEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAH---NLSVLLQHSESKLVFV 117 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~---~l~~~l~~~~~~~ii~ 117 (485)
+.+.++.+.+-..+.+. .+....++.+...+...++.-.+++-..|..-+.=...-++. ++...+++.++++||+
T Consensus 137 ~~~~~~L~~l~~~~~~~l~~~~~~~~~~~t~H~af~Y~~~~ygl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 216 (276)
T cd01016 137 EAYVEELDSLDAYAKKKIAEIPEQQRVLVTAHDAFGYFGRAYGFEVKGLQGISTDSEAGLRDINELVDLIVERKIKAIFV 216 (276)
T ss_pred HHHHHHHHHHHHHHHHHHhhCchhcCeEEEecCcHHHHHHHcCCeEecCcCCCcccCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34444555555544442 233345778888889999998888877774321112222344 4566778889999999
Q ss_pred cCcchHHHHHHh
Q 036361 118 DHLHSSLVLEAL 129 (485)
Q Consensus 118 ~~~~~~~~~~~~ 129 (485)
++.......+.+
T Consensus 217 e~~~~~~~~~~l 228 (276)
T cd01016 217 ESSVNQKSIEAL 228 (276)
T ss_pred eCCCCHHHHHHH
Confidence 987766544443
No 287
>PRK07476 eutB threonine dehydratase; Provisional
Probab=34.85 E-value=2.8e+02 Score=26.06 Aligned_cols=55 Identities=15% Similarity=0.067 Sum_probs=42.7
Q ss_pred EEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 69 VVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 69 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
+....+-.-..+.++|.+.|..+..+-|...+......++..++++++++....+
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~~~~ 125 (322)
T PRK07476 71 VTASTGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRSQDD 125 (322)
T ss_pred EEECCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 4446667777788889999998777777766677788899999999999865433
No 288
>PF08734 GYD: GYD domain; InterPro: IPR014845 These proteins of unknown function are usually less than 100 amino acids in length. They may belong to the dimeric alpha/beta barrel superfamily.
Probab=34.83 E-value=1.8e+02 Score=21.26 Aligned_cols=62 Identities=15% Similarity=0.194 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHcCC---------CCCCEEEEE-cCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHh
Q 036361 46 HRRCLQVASSLSSVGI---------QRGHVVSVV-APNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLL 107 (485)
Q Consensus 46 ~~~~~~lA~~L~~~gi---------~~gd~V~l~-~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (485)
-+|..++...+.+.|. ++-|.|.++ .|+........+++...|.+-.-.-+..+.+++..++
T Consensus 19 ~~R~~a~~~~~e~~Gg~l~~~y~t~G~yD~v~i~eaPD~~~a~~~~l~i~~~G~v~~et~~a~~~~e~~~~~ 90 (91)
T PF08734_consen 19 PDRAEAVRALIEALGGKLKSFYWTLGEYDFVVIVEAPDDETAAAASLAIRSSGNVRTETLRAFPWDEFDEIV 90 (91)
T ss_pred HHHHHHHHHHHHHcCCEEEEEEEecCCCCEEEEEEcCCHHHHHHHHHHHHcCCceEEEEEecCCHHHHHHHh
Confidence 4455555555555554 556777777 6777778888999999997766556777888887765
No 289
>cd01529 4RHOD_Repeats Member of the Rhodanese Homology Domain superfamily. This CD includes putative rhodanese-related sulfurtransferases which contain 4 copies of the Rhodanese Homology Domain. Only the second and most of the fourth repeats contain the putative catalytic Cys residue. This CD aligns the 1st , 2nd, 3rd, and 4th repeats.
Probab=34.30 E-value=1.5e+02 Score=21.61 Aligned_cols=48 Identities=8% Similarity=-0.054 Sum_probs=31.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 39 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
.+.+.++......+.. +.. +.+++.|.++|.++.....+...+.+.|.
T Consensus 34 ~ip~~~~~~~~~~~~~-~~~--~~~~~~ivv~c~~g~~s~~~~~~l~~~G~ 81 (96)
T cd01529 34 SIPGAALVLRSQELQA-LEA--PGRATRYVLTCDGSLLARFAAQELLALGG 81 (96)
T ss_pred eCCHHHhcCCHHHHHH-hhc--CCCCCCEEEEeCChHHHHHHHHHHHHcCC
Confidence 4666666554444432 222 45778899999887777666666677775
No 290
>PRK06060 acyl-CoA synthetase; Validated
Probab=34.25 E-value=2.6e+02 Score=29.66 Aligned_cols=81 Identities=11% Similarity=-0.035 Sum_probs=59.5
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+..+... .++.+++++...++-+..+ +..+++++..|+..+..+ .+...++...++..++..++.
T Consensus 30 ~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~-~~~~la~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~ 108 (705)
T PRK06060 30 VVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDL-VQLLLACLARGVMAFLANPELHRDDHALAARNTEPALVVT 108 (705)
T ss_pred ceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEE
Confidence 47888887766555543 4688999999888876654 334678888888777665 467788888889999988887
Q ss_pred chHHHH
Q 036361 283 APVVLN 288 (485)
Q Consensus 283 ~p~~~~ 288 (485)
......
T Consensus 109 ~~~~~~ 114 (705)
T PRK06060 109 SDALRD 114 (705)
T ss_pred chHHhh
Confidence 655443
No 291
>PRK05973 replicative DNA helicase; Provisional
Probab=33.99 E-value=1.3e+02 Score=26.84 Aligned_cols=90 Identities=17% Similarity=0.144 Sum_probs=60.9
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHH--HHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHh--h
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQ--VASSLSSVGIQRGHVVSVVAPNV--PSMYELQFG--V 84 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~--lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA--~ 84 (485)
....++++.+++.|...+-+ +|.-|...+.+ -+..|.. |+.+|+.+.|..+++ -..+...++ .
T Consensus 20 ~~~~~~~~~~~~~a~~~g~~----------~w~~~~~~~~~~~p~~~l~G-Gl~~Gsl~LIaG~PG~GKT~lalqfa~~~ 88 (237)
T PRK05973 20 AQNIPLHEALDRIAAEEGFS----------SWSLLAAKAAATTPAEELFS-QLKPGDLVLLGARPGHGKTLLGLELAVEA 88 (237)
T ss_pred hcCCcHHHHHHHHHHHhccc----------hHHHHHHhccCCCCHHHhcC-CCCCCCEEEEEeCCCCCHHHHHHHHHHHH
Confidence 45667788888888776544 55556555544 2334433 999999999999987 344444333 2
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcC
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSE 111 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (485)
.+.|-.++.+....+++++...+...+
T Consensus 89 a~~Ge~vlyfSlEes~~~i~~R~~s~g 115 (237)
T PRK05973 89 MKSGRTGVFFTLEYTEQDVRDRLRALG 115 (237)
T ss_pred HhcCCeEEEEEEeCCHHHHHHHHHHcC
Confidence 345877788888888888887776664
No 292
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=33.59 E-value=2.2e+02 Score=28.30 Aligned_cols=69 Identities=19% Similarity=0.299 Sum_probs=42.4
Q ss_pred eeeeHHHHHHHHHHH--------------HHHH-HHcCCCCCCEEEEEcCCchhHHHHHHh-hhccCceEEec-------
Q 036361 38 TTYTWSETHRRCLQV--------------ASSL-SSVGIQRGHVVSVVAPNVPSMYELQFG-VPMSGAILNNI------- 94 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~l--------------A~~L-~~~gi~~gd~V~l~~~~~~~~~~~~lA-~~~~G~~~v~l------- 94 (485)
..-||.+|.+.+..+ |..| ...++++||.| + +..++.+.-| +...|++++-+
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V----p-~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV----P-GNMYFTTTRYHQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE----C-CccchHhhHHHHHhCCcEEEeeecccccc
Confidence 345777777766543 3232 33689999965 3 3334444444 67888877644
Q ss_pred -------CCCCCHHHHHHHhhhcC
Q 036361 95 -------NTRLDAHNLSVLLQHSE 111 (485)
Q Consensus 95 -------~~~~~~~~l~~~l~~~~ 111 (485)
.-+.+.+.++..++...
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhcccc
Confidence 33467888888887543
No 293
>PF15136 UPF0449: Uncharacterised protein family UPF0449
Probab=33.41 E-value=1.4e+02 Score=22.10 Aligned_cols=51 Identities=22% Similarity=0.218 Sum_probs=40.7
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEeCC--------------------eeeeHHHHHHHHHHHHHHHHH
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVYNN--------------------TTYTWSETHRRCLQVASSLSS 58 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~--------------------~~~Ty~~l~~~~~~lA~~L~~ 58 (485)
+....|.|+.++|+..-...++.++|.... ++-+|-+++++-.+....|++
T Consensus 8 PtRP~PPTvEqILEDv~~A~~~DpVFt~l~~~~~~~~~~~~~~~~e~~Y~Qs~~Yv~~NerLqqa~~~Lkk 78 (97)
T PF15136_consen 8 PTRPEPPTVEQILEDVRGAPPDDPVFTILDSPDPSNKNEDSESEREQQYQQSRTYVAMNERLQQARDQLKK 78 (97)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCeeeeeccCccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788999999999988889998887641 357788888888888877776
No 294
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=33.22 E-value=3.2e+02 Score=23.53 Aligned_cols=87 Identities=17% Similarity=0.202 Sum_probs=51.6
Q ss_pred CEEEEecc-hhhHhHHHHHHHHH-hhcceEeecc-cCCHHHHHHHHHhcCceeeecchHH------HHHHhCCCCCCCCC
Q 036361 230 PVYLWTLP-MFHANGWGYTWGMA-AVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVV------LNMISNSPDFEPLK 300 (485)
Q Consensus 230 ~~~~~~~p-~~~~~g~~~~~~~l-~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~------~~~l~~~~~~~~l~ 300 (485)
.+++.+.+ =.|..|...+-..+ ..|-.++... ...++.+.+.+++.+++.+.++-+. +..+.+..+.....
T Consensus 84 ~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~ 163 (201)
T cd02070 84 KVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALMTTTMGGMKEVIEALKEAGLR 163 (201)
T ss_pred eEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccccccHHHHHHHHHHHHHCCCC
Confidence 44455555 37888876654444 4566666554 5678999999999999987765422 22222222222211
Q ss_pred CCceEEeccCCCChhh
Q 036361 301 TPVQILTAGAPPPAPV 316 (485)
Q Consensus 301 ~lr~i~~~g~~l~~~~ 316 (485)
.--.+++||..++.+.
T Consensus 164 ~~~~i~vGG~~~~~~~ 179 (201)
T cd02070 164 DKVKVMVGGAPVNQEF 179 (201)
T ss_pred cCCeEEEECCcCCHHH
Confidence 1234788888888753
No 295
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=32.84 E-value=1.3e+02 Score=25.49 Aligned_cols=46 Identities=7% Similarity=0.016 Sum_probs=33.0
Q ss_pred CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHh
Q 036361 37 NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 37 ~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
+.-+||.|+.+.+.++|..+.+. ++....+.+...++-..++..+|
T Consensus 14 ~~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La 59 (181)
T PRK09162 14 DCLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLL 59 (181)
T ss_pred cEeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHH
Confidence 45789999999999999999984 22222355666666666666665
No 296
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=32.18 E-value=41 Score=22.09 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=14.3
Q ss_pred cCceEEEecCceEEEEccC
Q 036361 425 TGDIAVMHVDGYVEIKDRS 443 (485)
Q Consensus 425 TGD~~~~~~~g~l~~~gR~ 443 (485)
-|.+.+.++||.+.+.|++
T Consensus 32 ~~~i~Y~~~dg~yli~G~l 50 (57)
T PF10411_consen 32 GGGILYVDEDGRYLIQGQL 50 (57)
T ss_dssp TTEEEEEETTSSEEEES-E
T ss_pred CCeEEEEcCCCCEEEEeEE
Confidence 4568888889988888874
No 297
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=32.08 E-value=2.4e+02 Score=28.79 Aligned_cols=81 Identities=9% Similarity=-0.041 Sum_probs=60.2
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..+... .++..++++...++-...+ +..+++++..|+..+..+ .+...++...++..+++.++.
T Consensus 49 ~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~ 127 (563)
T PRK06710 49 DITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQA-VIGYYGTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILC 127 (563)
T ss_pred eecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEE
Confidence 57888887766655544 3677889998888776553 345678888887777665 567889999999999999988
Q ss_pred chHHHH
Q 036361 283 APVVLN 288 (485)
Q Consensus 283 ~p~~~~ 288 (485)
.+....
T Consensus 128 ~~~~~~ 133 (563)
T PRK06710 128 LDLVFP 133 (563)
T ss_pred eccchh
Confidence 765443
No 298
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=31.96 E-value=2.2e+02 Score=27.56 Aligned_cols=10 Identities=20% Similarity=0.165 Sum_probs=5.8
Q ss_pred eeeccCCccc
Q 036361 327 VCHGYGLTET 336 (485)
Q Consensus 327 i~~~Yg~tE~ 336 (485)
+...+|..|+
T Consensus 325 ~~~s~G~~~s 334 (385)
T PRK08574 325 PSPSLGGVES 334 (385)
T ss_pred EccCCCCCcc
Confidence 4555666665
No 299
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=31.79 E-value=4.9e+02 Score=25.53 Aligned_cols=71 Identities=7% Similarity=-0.101 Sum_probs=52.6
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEec--CCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 53 ASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI--NTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 53 A~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
...+.+..-=+|-+|+.+++=.++..+.+..+...|+-+... ||..+.++....|...+..+.=......+
T Consensus 25 ~~~~~~~~p~~g~~i~~~~hl~~~ta~l~~~L~~~GA~v~~~~~np~stqd~vaa~l~~~gi~v~a~~~~~~~ 97 (413)
T cd00401 25 REEYGASKPLKGARIAGCLHMTVQTAVLIETLVALGAEVRWSSCNIFSTQDHAAAAIAAAGIPVFAWKGETLE 97 (413)
T ss_pred HHHhhccCCCCCCEEEEEEcchHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhcCceEEEEcCCCHH
Confidence 334443333468999999999999999999999999875433 57778899999999888886554444333
No 300
>PRK07867 acyl-CoA synthetase; Validated
Probab=31.76 E-value=3.5e+02 Score=27.35 Aligned_cols=83 Identities=12% Similarity=-0.028 Sum_probs=60.6
Q ss_pred EeccHHHHHHHHHHHHHh----CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 207 VHSHRGIFILTANALIDW----AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
.+|...+...+......+ +..+++++....+-...+ ...+++++..|+..+..+ ...++++...++..++..++
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li 106 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEF-SLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLVL 106 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHH-HHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEE
Confidence 588888877766655543 356678877777754432 334678888898888765 56788999999999999999
Q ss_pred cchHHHHHH
Q 036361 282 GAPVVLNMI 290 (485)
Q Consensus 282 ~~p~~~~~l 290 (485)
........+
T Consensus 107 ~~~~~~~~~ 115 (529)
T PRK07867 107 TESAHAELL 115 (529)
T ss_pred ECHhHHHHH
Confidence 887666543
No 301
>PRK05939 hypothetical protein; Provisional
Probab=31.74 E-value=2.1e+02 Score=27.84 Aligned_cols=30 Identities=20% Similarity=0.453 Sum_probs=12.2
Q ss_pred ccCceEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 86 MSGAILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 86 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
+.|+.+..++.. ..+.+...+.. +.++|++
T Consensus 108 ~~G~~v~~v~~~-d~e~l~~~l~~-~tklV~v 137 (397)
T PRK05939 108 GLGVEVTMVDAT-DVQNVAAAIRP-NTRMVFV 137 (397)
T ss_pred hcCCEEEEECCC-CHHHHHHhCCC-CCeEEEE
Confidence 345444444332 33444444422 3444444
No 302
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=31.61 E-value=1.6e+02 Score=27.12 Aligned_cols=66 Identities=15% Similarity=0.064 Sum_probs=50.4
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe-cCCCCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 59 VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN-INTRLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
..+++||.|+=-..|+.--.+.+-=|-..|..-+- +..+...+++...|+.+++..||++++..+.
T Consensus 156 v~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 156 VQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred HhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 46889999998888886555555555566765444 4456678999999999999999999877654
No 303
>TIGR01101 V_ATP_synt_F vacuolar ATP synthase F subunit. This model describes the vacuolar ATP synthase F subunit (14 kDa subunit) in eukaryotes. In some archaeal species this protein subunit is referred as G subunit
Probab=31.41 E-value=2.5e+02 Score=21.75 Aligned_cols=78 Identities=8% Similarity=0.205 Sum_probs=52.0
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCce---------EEecCCCCCHHHHHHH----hhhcCCcEEEEcCcchHHHHHH
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAI---------LNNINTRLDAHNLSVL----LQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~---------~v~l~~~~~~~~l~~~----l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
..+..|+++.. .|.+.-+.. +|.- +...+...+.+++... +.+-+..+|+..+...+.+...
T Consensus 3 ~~~~~IaVIGD--~Dtv~GF~L---aGi~~~~~~~~~nf~~v~~~t~~eei~~~~~~~l~~~digIIlIte~~a~~i~~~ 77 (115)
T TIGR01101 3 EKGKLIAVIGD--EDTVVGFLL---GGIGEINKNRHPNFLVVDKNTTVSEIEDCFNRFLKRDDIAIILINQHIAEMIRHA 77 (115)
T ss_pred CCCcEEEEEec--HHHHHHHHH---hCCCccccccccceeeecCCCCHHHHHHHHHHHhhcCCeEEEEEcHHHHHHhHHH
Confidence 35678999988 565544444 4543 3445665566665544 5567788999999888888877
Q ss_pred hccCCCCCCCCeEEEecC
Q 036361 129 LSLFPRDTKRPHLVLVDD 146 (485)
Q Consensus 129 ~~~~~~~~~~~~~i~~~~ 146 (485)
..... ...+.++.+.+
T Consensus 78 I~~~~--~~~PaIieIP~ 93 (115)
T TIGR01101 78 VDAHT--RSIPAVLEIPS 93 (115)
T ss_pred HHhcC--CcCCEEEEECC
Confidence 77655 25677777765
No 304
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=31.33 E-value=25 Score=16.26 Aligned_cols=9 Identities=78% Similarity=1.280 Sum_probs=6.7
Q ss_pred ccCCccccc
Q 036361 330 GYGLTETAG 338 (485)
Q Consensus 330 ~Yg~tE~~~ 338 (485)
.||+|++.+
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888864
No 305
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=31.03 E-value=3.2e+02 Score=25.83 Aligned_cols=77 Identities=8% Similarity=-0.040 Sum_probs=38.6
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 41 TWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
.|....+...++...+.+ .|..+.+ +++...++.+ +..++.+.+..|-.++..++..........++..+++++++.
T Consensus 26 ~~~~~~~~~~~~~~~la~~~g~~~~~-~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 104 (356)
T cd06451 26 RSPEFLALMDEILEGLRYVFQTENGL-TFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVE 104 (356)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCCC-EEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHHHHHHHHHhCCCeEEee
Confidence 344444444455555554 3663333 4444444333 344444666667665555443333223455566677766664
No 306
>PRK12582 acyl-CoA synthetase; Provisional
Probab=30.95 E-value=2.5e+02 Score=29.23 Aligned_cols=78 Identities=4% Similarity=-0.129 Sum_probs=56.9
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc-CC-----HHHHHHHHHhcC
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR-FD-----ASAISDLIQKHN 276 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~-----~~~~~~~i~~~~ 276 (485)
-.+|.+.+...+..+... .++.++|++...++....+ ...+++++..|+..+..+. +. ..++...++..+
T Consensus 79 ~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~ 157 (624)
T PRK12582 79 RKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEH-ALMTLAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVK 157 (624)
T ss_pred EEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCeEeeccCccccccCCHHHHHHHHHhcC
Confidence 468888887776665554 4788999999888855443 3446788888888877653 33 378899999999
Q ss_pred ceeeecch
Q 036361 277 VTHMCGAP 284 (485)
Q Consensus 277 ~t~~~~~p 284 (485)
+..++...
T Consensus 158 ~~~vi~~~ 165 (624)
T PRK12582 158 PRVVFAQS 165 (624)
T ss_pred CcEEEecC
Confidence 88887653
No 307
>PRK06382 threonine dehydratase; Provisional
Probab=30.89 E-value=3.2e+02 Score=26.71 Aligned_cols=61 Identities=5% Similarity=0.083 Sum_probs=45.5
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 60 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
+.++| .+....+-.-..+.++|...|..+..+=|...+......++..+++++++.....+
T Consensus 71 ~~~~g---vv~aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~~~ 131 (406)
T PRK06382 71 ELRNG---VITASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDYDE 131 (406)
T ss_pred ccCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCHHH
Confidence 44455 34455566777778899999988887777777667777899999999999875333
No 308
>cd06447 D-Ser-dehyd D-Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- or D-serine to pyruvate and ammonia. D-serine dehydratase serves as a detoxifying enzyme in most E. coli strains where D-serine is a competitive antagonist of beta-alanine in the biosynthetic pathway to pentothenate and coenzyme A. D-serine dehydratase is different from other pyridoxal-5'-phosphate-dependent enzymes in that it catalyzes alpha, beta-elimination reactions on amino acids.
Probab=30.84 E-value=1.9e+02 Score=28.18 Aligned_cols=58 Identities=9% Similarity=-0.139 Sum_probs=47.0
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
-.+....+-.-+...++|...|..+..+=|...+.+-...++..+++++.++....+.
T Consensus 136 ~VV~aSsGN~G~alA~~a~~~G~~~~IvvP~~~~~~K~~~ira~GAeVv~v~~~~~~a 193 (404)
T cd06447 136 SIAVGSTGNLGLSIGIMAAALGFKVTVHMSADAKQWKKDKLRSKGVTVVEYETDYSKA 193 (404)
T ss_pred EEEEECccHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEECCCHHHH
Confidence 4566677788888889999999988877777777777888999999999998654444
No 309
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=30.72 E-value=94 Score=16.70 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=14.1
Q ss_pred EecCceEEEEccCCceEE
Q 036361 431 MHVDGYVEIKDRSKDVII 448 (485)
Q Consensus 431 ~~~~g~l~~~gR~~~~i~ 448 (485)
++++|.+++.++..+.|.
T Consensus 9 v~~~g~i~VaD~~n~rV~ 26 (28)
T PF01436_consen 9 VDSDGNIYVADSGNHRVQ 26 (28)
T ss_dssp EETTSEEEEEECCCTEEE
T ss_pred EeCCCCEEEEECCCCEEE
Confidence 447999999998777665
No 310
>PRK10287 thiosulfate:cyanide sulfurtransferase; Provisional
Probab=30.42 E-value=1.7e+02 Score=22.02 Aligned_cols=49 Identities=6% Similarity=-0.024 Sum_probs=34.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
..+.+.++.+ .+.+.+..+.+.|.++|.++.....+...+.+.|..-+-
T Consensus 41 iniP~~~l~~-------~l~~l~~~~~~~IVlyC~~G~rS~~aa~~L~~~G~~~v~ 89 (104)
T PRK10287 41 INIPLKEVKE-------RIATAVPDKNDTVKLYCNAGRQSGQAKEILSEMGYTHAE 89 (104)
T ss_pred EECCHHHHHH-------HHHhcCCCCCCeEEEEeCCChHHHHHHHHHHHcCCCeEE
Confidence 4566666543 345556666788999999988877777888888876543
No 311
>PTZ00297 pantothenate kinase; Provisional
Probab=30.30 E-value=5.1e+02 Score=30.35 Aligned_cols=98 Identities=11% Similarity=-0.048 Sum_probs=70.7
Q ss_pred EEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeec
Q 036361 206 VVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~ 282 (485)
..+|.+.+...+..... .+++.++|++...++-...+. ...++++..|+..+-.. .+..++...+++.++.++++
T Consensus 456 ~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewv-ia~lA~~~~GaV~VPly-~t~~eL~yIL~~S~akvVfv 533 (1452)
T PTZ00297 456 EWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIV-ILEVACALYGFTTLPLV-GKGSTMRTLIDEHKIKVVFA 533 (1452)
T ss_pred eEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHH-HHHHHHHHcCCEEEeCC-CCHHHHHHHHHhcCCcEEEE
Confidence 35888888776655544 458899999998888665432 23567778887777664 35678999999999999999
Q ss_pred chHHHHHHhCCCCCCCCCCCceEEecc
Q 036361 283 APVVLNMISNSPDFEPLKTPVQILTAG 309 (485)
Q Consensus 283 ~p~~~~~l~~~~~~~~l~~lr~i~~~g 309 (485)
....+..+.+... ..++.+++..
T Consensus 534 ~~~~l~kl~~i~~----~~Lr~IIv~d 556 (1452)
T PTZ00297 534 DRNSVAAILTCRS----RKLETVVYTH 556 (1452)
T ss_pred chhHHHHHHhhcc----cCCcEEEEEC
Confidence 8888887764321 2577777654
No 312
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=30.25 E-value=5.6e+02 Score=25.51 Aligned_cols=57 Identities=19% Similarity=0.167 Sum_probs=34.2
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC-CCCHHHHHHHhhhcCCcEEEEcC
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-RLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+|||+|++=-|. ...+..++-..-+-.+.||+|. ...++.+...++..+++++++.+
T Consensus 177 ~pGd~v~vE~Pt-Y~~~~~~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P 234 (459)
T COG1167 177 DPGDTVLVEDPT-YPGALQALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTP 234 (459)
T ss_pred CCCCEEEEcCCC-cHHHHHHHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECC
Confidence 467777665553 3333333333333344444432 35688888888888889988865
No 313
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=30.20 E-value=3e+02 Score=25.16 Aligned_cols=85 Identities=13% Similarity=0.169 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHH---HHHHhhhcCCcEEEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHN---LSVLLQHSESKLVFV 117 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~ 117 (485)
+++.++...+-..+.+. .+ ++ +..+...+...++.-.|++-..|..-.--....++.+ +...+++.++++||+
T Consensus 149 ~~~~~~L~~l~~~~~~~~~~~-~~-~~~v~~H~af~Y~~~~~gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 226 (282)
T cd01017 149 AAYAKKLEALDQEYRAKLAKA-KG-KTFVTQHAAFGYLARRYGLKQIAIVGVSPEVEPSPKQLAELVEFVKKSDVKYIFF 226 (282)
T ss_pred HHHHHHHHHHHHHHHHHHhcc-CC-CeEEEecccHHHHHHHCCCeEEecccCCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34444455555555442 22 33 4455666688888888887776632211122334444 556778888999999
Q ss_pred cCcchHHHHHHh
Q 036361 118 DHLHSSLVLEAL 129 (485)
Q Consensus 118 ~~~~~~~~~~~~ 129 (485)
++.......+.+
T Consensus 227 e~~~~~~~~~~l 238 (282)
T cd01017 227 EENASSKIAETL 238 (282)
T ss_pred eCCCChHHHHHH
Confidence 988776544443
No 314
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=30.01 E-value=4.5e+02 Score=26.76 Aligned_cols=97 Identities=12% Similarity=-0.029 Sum_probs=67.5
Q ss_pred CcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH----hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeec-ccC
Q 036361 189 DPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID----WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICL-RRF 263 (485)
Q Consensus 189 ~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~-~~~ 263 (485)
+...+++-+-.++. -.+|.+.+...+...... .+. ++|+++..+|..... ...++++...|+..+.+ +.|
T Consensus 25 ~~~aii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~-~~a~LA~~riGAI~~~vf~~f 99 (528)
T COG0365 25 DDTAIIFDGEDGLF---RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEA-VIALLATARIGAIPAVVSPGL 99 (528)
T ss_pred CceEEEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHH-HHHHHHHHHcCCEEeecccCC
Confidence 33444444433333 577888877665444443 346 999999999987764 33456777778765554 578
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 264 DASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+..+..-+...++.+++.....++..
T Consensus 100 ~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 100 SAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CHHHHHHHHHccCCCEEEEeccccccc
Confidence 999999999999999999877766544
No 315
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=29.98 E-value=1.7e+02 Score=27.44 Aligned_cols=89 Identities=10% Similarity=-0.033 Sum_probs=54.1
Q ss_pred CCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 29 DCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 29 ~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
.++.+.... .+=|+++ +.+..+...+.+.| ++.|... ..+-.-..+.++|...|..+..+-|...+......
T Consensus 38 ~~i~~K~E~~nptGS~K~--R~a~~~l~~a~~~g---~~~vv~~-SsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~ 111 (324)
T cd01563 38 KNLYVKDEGLNPTGSFKD--RGMTVAVSKAKELG---VKAVACA-STGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQ 111 (324)
T ss_pred CceEEEecCCCCcccHHH--hhHHHHHHHHHHcC---CCEEEEe-CCCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHH
Confidence 456665544 2333332 22333333333434 4455444 45555566668889999887776666556667788
Q ss_pred hhhcCCcEEEEcCcchH
Q 036361 107 LQHSESKLVFVDHLHSS 123 (485)
Q Consensus 107 l~~~~~~~ii~~~~~~~ 123 (485)
++..++++++++....+
T Consensus 112 l~~~GA~Vi~~~~~~~~ 128 (324)
T cd01563 112 ALAYGATVLAVEGNFDD 128 (324)
T ss_pred HHHcCCEEEEECCcHHH
Confidence 99999999999875443
No 316
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=29.97 E-value=5.2e+02 Score=25.01 Aligned_cols=107 Identities=10% Similarity=0.061 Sum_probs=63.5
Q ss_pred CcchhHHHHHHHhhcCCCcEEEe-C--------CeeeeHHHHHHHHHHHHHHHHHcCCCC--CCEEEEEcCCch--hHHH
Q 036361 13 PLTTLGFLERAATAYSDCPSIVY-N--------NTTYTWSETHRRCLQVASSLSSVGIQR--GHVVSVVAPNVP--SMYE 79 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~-~--------~~~~Ty~~l~~~~~~lA~~L~~~gi~~--gd~V~l~~~~~~--~~~~ 79 (485)
..++.+.++-..+++-+..+++. - ...+|++.+...+..++..+ ++.+ .|++..++|-.- -+..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~~Pl~h~~g~~~ 155 (386)
T TIGR02372 79 RRRIGEWVDLIAHHSTPTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISCVPAHHLYGFLF 155 (386)
T ss_pred hccHHHHHHHHHhcCCCCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEeCCcHHHHHHHH
Confidence 34566666555555544455544 1 25699999998888777654 4433 456766666552 3344
Q ss_pred HHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 80 LQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
.++..+..|+.++.... .++..+-..++.. .+++..+.....+
T Consensus 156 ~~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 156 SCLLPSRRGLEAKQLAA-APASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred HHHHHHHCCCeEEecCC-CChHHHHHhhccC--CEEEECcHHHHHH
Confidence 55666778988877653 4554444444322 5666666655544
No 317
>COG1171 IlvA Threonine dehydratase [Amino acid transport and metabolism]
Probab=29.75 E-value=4.8e+02 Score=24.78 Aligned_cols=98 Identities=8% Similarity=-0.042 Sum_probs=64.1
Q ss_pred cCCCcEEEeCCeeeeH-HHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHH
Q 036361 27 YSDCPSIVYNNTTYTW-SETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLS 104 (485)
Q Consensus 27 ~p~~~a~~~~~~~~Ty-~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (485)
.+.++.+-..+.+.|- -.++..-+++.+ |... ..++| .+....+-..--..|||-++|...+.+=|..++..-.
T Consensus 38 ~g~~v~lK~E~lQ~~gSFK~RGA~n~i~~-Ls~e~~~~~g---ViaaSaGNHaQGvA~aa~~lGi~a~IvMP~~tp~~Kv 113 (347)
T COG1171 38 LGAEIYLKRENLQPVGSFKIRGAYNKLSS-LSEEEERAAG---VIAASAGNHAQGVAYAAKRLGIKATIVMPETTPKIKV 113 (347)
T ss_pred hCceEEEeeccCcccccchhhhHHHHHHh-cChhhhhcCc---eEEecCCcHHHHHHHHHHHhCCCEEEEecCCCcHHHH
Confidence 4566666665532222 345555555555 4422 22233 3344444455566899999999988888888888888
Q ss_pred HHhhhcCCcEEEEcCcchHHHHHH
Q 036361 105 VLLQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 105 ~~l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
..++..++.+++++....+....+
T Consensus 114 ~a~r~~GaeVil~g~~~dda~~~a 137 (347)
T COG1171 114 DATRGYGAEVILHGDNFDDAYAAA 137 (347)
T ss_pred HHHHhcCCEEEEECCCHHHHHHHH
Confidence 999999999999998766554443
No 318
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=29.42 E-value=5.7e+02 Score=25.34 Aligned_cols=85 Identities=9% Similarity=-0.010 Sum_probs=60.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCC--CCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTR--LDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (485)
..+|++.+...+...+.. .++..++++....|-+.. .+..+++.+..|...+..+.. ..+..+...+++.++..
T Consensus 161 v~~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~ 237 (503)
T PRK04813 161 VQISHDNLVSFTNWMLED---FALPEGPQFLNQAPYSFDLSVMDLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINV 237 (503)
T ss_pred EEeehHHHHHHHHHHHHH---cCCCcCceeeecCCcchhHhHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeE
Confidence 468999988776655544 577888887777665532 234566778899888877653 35677788889999999
Q ss_pred EEEcCcchHHH
Q 036361 115 VFVDHLHSSLV 125 (485)
Q Consensus 115 ii~~~~~~~~~ 125 (485)
+...+.....+
T Consensus 238 ~~~~p~~~~~~ 248 (503)
T PRK04813 238 WVSTPSFADMC 248 (503)
T ss_pred EEeChHHHHHH
Confidence 88887666543
No 319
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=29.16 E-value=1.4e+02 Score=21.27 Aligned_cols=40 Identities=18% Similarity=0.226 Sum_probs=23.2
Q ss_pred cEEEeCC------eeeeHHHHHH-HHHHHHHHHHHcCCCCCCEEEEEcCCc
Q 036361 31 PSIVYNN------TTYTWSETHR-RCLQVASSLSSVGIQRGHVVSVVAPNV 74 (485)
Q Consensus 31 ~a~~~~~------~~~Ty~~l~~-~~~~lA~~L~~~gi~~gd~V~l~~~~~ 74 (485)
+|+++.+ -+++=.|+.+ |..+++..|.++|++ |-+--.+|
T Consensus 16 I~vi~e~kIqGItfslDg~efl~eri~~L~~~L~kRgv~----v~L~~~~S 62 (86)
T PF09153_consen 16 IAVIFEEKIQGITFSLDGEEFLRERISRLIEFLKKRGVS----VSLDEEPS 62 (86)
T ss_dssp EEEEESSSEEEEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred EEEEEcCceeeEEEEeccHHHHHHHHHHHHHHHHhcCce----eEEeecCC
Confidence 4566665 2455578777 999999999998774 44444443
No 320
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=29.11 E-value=1.3e+02 Score=23.05 Aligned_cols=41 Identities=20% Similarity=0.090 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCC-chhHHHHHHhhhccCce
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPN-VPSMYELQFGVPMSGAI 90 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~-~~~~~~~~lA~~~~G~~ 90 (485)
..+.+.+...|+.++..|.++|.. +.....+.+.+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 445556677789999999999988 47666667777778854
No 321
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.08 E-value=2.8e+02 Score=28.21 Aligned_cols=80 Identities=8% Similarity=0.029 Sum_probs=58.6
Q ss_pred EeccHHHHHHHHHHHHH----hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 207 VHSHRGIFILTANALID----WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~----~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
.+|...+...+..+... .++.+++++....+-...+ ...+++++..|+..+..+ ...+..+...+++.+++.++
T Consensus 48 ~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii 126 (560)
T PRK08974 48 VMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQY-PIALFGILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIV 126 (560)
T ss_pred cccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEeccCccCCHHHHHHHHHhcCceEEE
Confidence 57888887766555543 3677889988887655432 334678888898888775 56788999999999999998
Q ss_pred cchHHH
Q 036361 282 GAPVVL 287 (485)
Q Consensus 282 ~~p~~~ 287 (485)
..+...
T Consensus 127 ~~~~~~ 132 (560)
T PRK08974 127 IVSNFA 132 (560)
T ss_pred Eecccc
Confidence 766543
No 322
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=29.07 E-value=1.1e+02 Score=30.02 Aligned_cols=118 Identities=19% Similarity=0.133 Sum_probs=61.4
Q ss_pred cchhHHHHHHHhhcCCC-cEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 14 LTTLGFLERAATAYSDC-PSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~-~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
-.+.+.-+..|+-++.. ..+...+.+-. +-..+.. -.++||.| ++-.|+--.+.- ||...|+.++
T Consensus 66 G~I~eAe~~aA~~fGAd~t~flvnGsT~g----------~~a~i~a-~~~~gd~V-Lv~RN~HkSv~~--alil~ga~Pv 131 (417)
T PF01276_consen 66 GIIKEAEELAARAFGADKTFFLVNGSTSG----------NQAMIMA-LCRPGDKV-LVDRNCHKSVYN--ALILSGAIPV 131 (417)
T ss_dssp THHHHHHHHHHHHHTESEEEEESSHHHHH----------HHHHHHH-HTTTTCEE-EEETT--HHHHH--HHHHHTEEEE
T ss_pred cHHHHHHHHHHHhcCCCeEEEEecCchHH----------HHHHHHH-hcCCCCEE-EEcCCcHHHHHH--HHHHcCCeEE
Confidence 34455556666666644 44433443321 1111112 14799975 555666666554 9999999999
Q ss_pred ecCCC---------CCH-----HHHHHHhhhcC-Cc----EEEEcCcch---HHHHHHhccCCCCCCCCeEEEecCCc
Q 036361 93 NINTR---------LDA-----HNLSVLLQHSE-SK----LVFVDHLHS---SLVLEALSLFPRDTKRPHLVLVDDDA 148 (485)
Q Consensus 93 ~l~~~---------~~~-----~~l~~~l~~~~-~~----~ii~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~~~~ 148 (485)
.|+|. .++ +.+...+++.. ++ ++++.+... ..+..+.+.+. .....+++|+-.
T Consensus 132 yi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h---~~~~~llvDEAh 206 (417)
T PF01276_consen 132 YIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICH---KHGIPLLVDEAH 206 (417)
T ss_dssp EEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHC---CTECEEEEE-TT
T ss_pred EecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhc---ccCCEEEEEccc
Confidence 88875 233 77877777654 33 455554322 23444444443 334455566543
No 323
>PRK08813 threonine dehydratase; Provisional
Probab=29.03 E-value=4.2e+02 Score=25.25 Aligned_cols=82 Identities=9% Similarity=-0.028 Sum_probs=53.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
.+-||+. +...+.+.+.. +.|...+ .+....+-.-....++|...|..+..+=|...+......++..++.++.+
T Consensus 59 ptGSfK~-RgA~~~l~~a~-~~~~~~~---VV~aSsGN~G~alA~aa~~~Gi~~~IvvP~~~~~~K~~~i~~~GAeVv~~ 133 (349)
T PRK08813 59 RTGSYKV-RGALNALLAGL-ERGDERP---VICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGATVRQH 133 (349)
T ss_pred CcCCCHH-HHHHHHHHHHH-HcCCCCe---EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHHHHHHcCCEEEEE
Confidence 3455543 22233444433 3344333 45667777888888899999988777666666666677789999999999
Q ss_pred cCcchHH
Q 036361 118 DHLHSSL 124 (485)
Q Consensus 118 ~~~~~~~ 124 (485)
+....+.
T Consensus 134 g~~~~~a 140 (349)
T PRK08813 134 GNSYDEA 140 (349)
T ss_pred CCCHHHH
Confidence 7654433
No 324
>PRK09545 znuA high-affinity zinc transporter periplasmic component; Reviewed
Probab=28.87 E-value=3.5e+02 Score=25.23 Aligned_cols=84 Identities=14% Similarity=0.238 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC--CCHHH---HHHHhhhcCCcE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--LDAHN---LSVLLQHSESKL 114 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~ 114 (485)
++++.++.+.+-..+++. .+ + .+..+...+...++.--|++-..|.. -+.+. -++.+ +...+++.++++
T Consensus 180 ~~~~~~~L~~l~~~~~~~l~~~-~-~~~~i~~H~af~Yf~~~ygl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 255 (311)
T PRK09545 180 LKDFEAQLAQTDKQIGNQLAPV-K-GKGYFVFHDAYGYFEKHYGLTPLGHF--TVNPEIQPGAQRLHEIRTQLVEQKATC 255 (311)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-C-CCcEEEECchHHHHHHhCCCceeeee--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 344444555555555542 22 2 34456677788888888888777643 23333 24455 555667888999
Q ss_pred EEEcCcchHHHHHHh
Q 036361 115 VFVDHLHSSLVLEAL 129 (485)
Q Consensus 115 ii~~~~~~~~~~~~~ 129 (485)
||+++.......+.+
T Consensus 256 If~e~~~~~~~~~~l 270 (311)
T PRK09545 256 VFAEPQFRPAVIESV 270 (311)
T ss_pred EEecCCCChHHHHHH
Confidence 999988776655444
No 325
>PRK10595 SOS cell division inhibitor; Provisional
Probab=28.72 E-value=2.3e+02 Score=23.55 Aligned_cols=14 Identities=14% Similarity=0.135 Sum_probs=6.4
Q ss_pred HHHhhhcCCcEEEE
Q 036361 104 SVLLQHSESKLVFV 117 (485)
Q Consensus 104 ~~~l~~~~~~~ii~ 117 (485)
+..|+...+..|++
T Consensus 99 EqaLrsG~~~aVL~ 112 (164)
T PRK10595 99 ERALRTGNYSVVLG 112 (164)
T ss_pred HHHHhhCCCcEEEE
Confidence 33444444444444
No 326
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=28.06 E-value=3.9e+02 Score=22.96 Aligned_cols=84 Identities=5% Similarity=-0.036 Sum_probs=57.1
Q ss_pred CCeeeeHHHHHHHHHHHHHHHHH-------cCCCCCCEEEEEcCCc----hhHHHHHHhhhccCceEEecCCCCCHHHHH
Q 036361 36 NNTTYTWSETHRRCLQVASSLSS-------VGIQRGHVVSVVAPNV----PSMYELQFGVPMSGAILNNINTRLDAHNLS 104 (485)
Q Consensus 36 ~~~~~Ty~~l~~~~~~lA~~L~~-------~gi~~gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (485)
....++..|..-.+..+-..|.. .+..++-+|.+.+..+ .-..+....+-..|.-++.+..+.+.+++.
T Consensus 47 ~~~~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~ 126 (201)
T cd02070 47 EEGEIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFV 126 (201)
T ss_pred ccCCeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 34678888877766655444333 1222244666665553 223344445557899999999999999999
Q ss_pred HHhhhcCCcEEEEcC
Q 036361 105 VLLQHSESKLVFVDH 119 (485)
Q Consensus 105 ~~l~~~~~~~ii~~~ 119 (485)
..+.+.+|++|..+-
T Consensus 127 ~~~~~~~~d~v~lS~ 141 (201)
T cd02070 127 EAVKEHKPDILGLSA 141 (201)
T ss_pred HHHHHcCCCEEEEec
Confidence 999999999998875
No 327
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=27.86 E-value=5.2e+02 Score=29.35 Aligned_cols=96 Identities=13% Similarity=0.071 Sum_probs=65.9
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~ 95 (485)
.|+.+|.+.. +..+|.+++...+...++ ..+++++|++...+|-.- .+...++..+..|+..+..+
T Consensus 791 ~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~~~ 867 (1140)
T PRK06814 791 DPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAA---RIDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFLYP 867 (1140)
T ss_pred CCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHH---hhCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEEec
Confidence 4566666542 145899988766665543 347889999888877532 33345667777898887765
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
.....+.+...+++.++..+...+.....+
T Consensus 868 ~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l 897 (1140)
T PRK06814 868 SPLHYRIIPELIYDTNATILFGTDTFLNGY 897 (1140)
T ss_pred CcccHHHHHHHHHhcCCEEEEecHHHHHHH
Confidence 545556677888999999998877655443
No 328
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=27.69 E-value=2.5e+02 Score=25.93 Aligned_cols=57 Identities=9% Similarity=0.003 Sum_probs=43.0
Q ss_pred CEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 65 HVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 65 d~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
+.| +....+-.-..+.++|.+.|..++.+-|...+.+....++..++++++++....
T Consensus 66 ~~i-v~~ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~~~ 122 (304)
T cd01562 66 KGV-VAASAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGEDFD 122 (304)
T ss_pred CcE-EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 344 344567777788888889998877776666666677889999999999987533
No 329
>PF07994 NAD_binding_5: Myo-inositol-1-phosphate synthase; InterPro: IPR002587 1L-myo-Inositol-1-phosphate synthase (5.5.1.4 from EC) catalyzes the conversion of D-glucose 6-phosphate to 1L-myo-inositol-1-phosphate, the first committed step in the production of all inositol-containing compounds, including phospholipids, either directly or by salvage. The enzyme exists in a cytoplasmic form in a wide range of plants, animals, and fungi. It has also been detected in several bacteria and a chloroplast form is observed in alga and higher plants. Inositol phosphates play an important role in signal transduction. In Saccharomyces cerevisiae (Baker's yeast), the transcriptional regulation of the INO1 gene has been studied in detail [] and its expression is sensitive to the availability of phospholipid precursors as well as growth phase. The regulation of the structural gene encoding 1L-myo-inositol-1-phosphate synthase has also been analyzed at the transcriptional level in the aquatic angiosperm, Spirodela polyrrhiza (Giant duckweed) and the halophyte, Mesembryanthemum crystallinum (Common ice plant) [].; GO: 0004512 inositol-3-phosphate synthase activity, 0006021 inositol biosynthetic process, 0008654 phospholipid biosynthetic process; PDB: 1GR0_A 1P1K_B 1LA2_B 1RM0_B 1P1I_B 1JKF_A 1P1F_A 1P1J_B 1JKI_B 1P1H_A ....
Probab=27.65 E-value=4.3e+02 Score=24.47 Aligned_cols=69 Identities=13% Similarity=0.062 Sum_probs=44.2
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-h---------------------------hHHHHHHhhhccCceEE
Q 036361 41 TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV-P---------------------------SMYELQFGVPMSGAILN 92 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~-~---------------------------~~~~~~lA~~~~G~~~v 92 (485)
.+.++.+....+..++.+.|+. ..|.|.+-++ . -..+..+|+++.|+.++
T Consensus 127 ~~~~~e~~~~DI~~f~~~~~~d--~vVvvn~asTE~~~~~~~~~~~t~~~l~~al~~~~~~~~aS~~YA~AAl~~g~~fv 204 (295)
T PF07994_consen 127 KREQVEQIREDIRDFKKENGLD--RVVVVNVASTERYIPVIPGVHDTLEALEKALDENDPEISASMLYAYAALEAGVPFV 204 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-S--CEEEEE-SSCC-S---CCCCCSSHHHHHHHHHTT-TTHHHHHHHHHHHHHTTEEEE
T ss_pred hHHHHHHHHHHHHHHHHHhCCC--cEEEEECCCCCCCCCCCccccCCHHHHHHHhhcCCCcCChHHHHHHHHHHCCCCeE
Confidence 4566667778888888888774 3455544433 2 24567789999999999
Q ss_pred ecCCCCCH--HHHHHHhhhcC
Q 036361 93 NINTRLDA--HNLSVLLQHSE 111 (485)
Q Consensus 93 ~l~~~~~~--~~l~~~l~~~~ 111 (485)
-..|.... ..+..+.++.+
T Consensus 205 N~tP~~~a~~P~l~ela~~~g 225 (295)
T PF07994_consen 205 NGTPSNIADDPALVELAEEKG 225 (295)
T ss_dssp E-SSSTTTTSHHHHHHHHHHT
T ss_pred eccCccccCCHHHHHHHHHcC
Confidence 88888755 45555555543
No 330
>smart00450 RHOD Rhodanese Homology Domain. An alpha beta fold found duplicated in the Rhodanese protein. The the Cysteine containing enzymatically active version of the domain is also found in the CDC25 class of protein phosphatases and a variety of proteins such as sulfide dehydrogenases and stress proteins such as Senesence specific protein 1 in plants, PspE and GlpE in bacteria and cyanide and arsenate resistance proteins. Inactive versions with a loss of the cysteine are also seen in Dual specificity phosphatases, ubiquitin hydrolases from yeast and in sulfuryltransferases. These are likely to play a role in protein interactions.
Probab=27.62 E-value=1.9e+02 Score=20.64 Aligned_cols=40 Identities=13% Similarity=0.108 Sum_probs=30.5
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 51 QVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 51 ~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.+...+...++.+++.|.++|.++.....+...+...|..
T Consensus 43 ~~~~~~~~~~~~~~~~iv~~c~~g~~a~~~~~~l~~~G~~ 82 (100)
T smart00450 43 EFEELLKRLGLDKDKPVVVYCRSGNRSAKAAWLLRELGFK 82 (100)
T ss_pred HHHHHHHHcCCCCCCeEEEEeCCCcHHHHHHHHHHHcCCC
Confidence 3445555678889999999998888777777777777765
No 331
>PRK09192 acyl-CoA synthetase; Validated
Probab=27.49 E-value=4.7e+02 Score=26.80 Aligned_cols=85 Identities=4% Similarity=-0.067 Sum_probs=61.2
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc-CC-------HHHHHHHHHh
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR-FD-------ASAISDLIQK 274 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~-------~~~~~~~i~~ 274 (485)
-.+|...+...+...... .++.+++++...++.+..+ +...++++..|+..+.++. +. .+++...++.
T Consensus 48 ~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~~~-~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~ 126 (579)
T PRK09192 48 EALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDGDF-VEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLAS 126 (579)
T ss_pred EEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCchhH-HHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHh
Confidence 568888887666555443 4788999999888875543 3446788888988887742 11 5789999999
Q ss_pred cCceeeecchHHHHHHh
Q 036361 275 HNVTHMCGAPVVLNMIS 291 (485)
Q Consensus 275 ~~~t~~~~~p~~~~~l~ 291 (485)
.++..++........+.
T Consensus 127 ~~~~~il~~~~~~~~~~ 143 (579)
T PRK09192 127 AQPAAIITPDELLPWVN 143 (579)
T ss_pred cCCCEEEeChHHHHHHH
Confidence 99999988776654433
No 332
>TIGR02035 D_Ser_am_lyase D-serine ammonia-lyase. This family consists of D-serine ammonia-lyase (EC 4.3.1.18), a pyridoxal-phosphate enzyme that converts D-serine to pyruvate and NH3. This enzyme is also called D-serine dehydratase and D-serine deaminase and was previously designated EC 4.2.1.14. It is homologous to an enzyme that acts on threonine and may itself act weakly on threonine.
Probab=27.01 E-value=2.3e+02 Score=27.89 Aligned_cols=62 Identities=10% Similarity=-0.138 Sum_probs=48.3
Q ss_pred EEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 66 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 66 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
+-.+....+-.-+...++|...|..+..+=|...+..-...++..++++++++....+....
T Consensus 153 ~~Vv~aSsGN~G~slA~~Aa~lG~~~~IvmP~~a~~~K~~~ir~~GAeVv~~~~~~~~a~~~ 214 (431)
T TIGR02035 153 YSIAVGSTGNLGLSIGIISAALGFQVTVHMSADAKQWKKDKLRSKGVTVVEYESDYGVAVEE 214 (431)
T ss_pred ceEEEECccHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCCHHHHHHH
Confidence 34566677778888888899999888877777777777889999999999998765544333
No 333
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=26.99 E-value=1.2e+02 Score=27.90 Aligned_cols=55 Identities=15% Similarity=0.143 Sum_probs=44.3
Q ss_pred eeeeHHHHHHH-----HH-HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 38 TTYTWSETHRR-----CL-QVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 38 ~~~Ty~~l~~~-----~~-~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..+.|.++.+. +. .++..+...|+.+.+.|.++|..+....+.+||+-.+|...+
T Consensus 202 iNipw~~~~~~~~~~~~~~~~~~l~~~~gi~~~~~vI~yCgsG~~As~~~~al~~lg~~~~ 262 (285)
T COG2897 202 INIPWTDLVDDGGLFKSPEEIARLYADAGIDPDKEVIVYCGSGVRASVTWLALAELGGPNN 262 (285)
T ss_pred cCcCHHHHhcCCCccCcHHHHHHHHHhcCCCCCCCEEEEcCCchHHHHHHHHHHHhCCCCc
Confidence 56889988872 23 333334468999999999999999999999999999997655
No 334
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=26.82 E-value=3.7e+02 Score=26.47 Aligned_cols=79 Identities=8% Similarity=-0.056 Sum_probs=58.4
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
..+|+..+...+..+... .++.+++++....+....+ ...+++++..|+..+..+ .+.+..+...+++.++..++
T Consensus 27 ~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i 105 (458)
T PRK09029 27 EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPET-LLAYLALLQCGARVLPLNPQLPQPLLEELLPSLTLDFAL 105 (458)
T ss_pred cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHH-HHHHHHHHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEE
Confidence 358888887777666554 3678889988887765543 344678888888888775 56778888999999998887
Q ss_pred cchH
Q 036361 282 GAPV 285 (485)
Q Consensus 282 ~~p~ 285 (485)
....
T Consensus 106 ~~~~ 109 (458)
T PRK09029 106 VLEG 109 (458)
T ss_pred EcCc
Confidence 6543
No 335
>PRK06145 acyl-CoA synthetase; Validated
Probab=26.79 E-value=6.4e+02 Score=25.03 Aligned_cols=86 Identities=14% Similarity=0.190 Sum_probs=59.2
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|+..+...+. ......++..+|++....|-.-. +....++.+..|+..+.. +..++..+...+++.++..+
T Consensus 167 v~~s~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~ 242 (497)
T PRK06145 167 VMHSYGNLHWKSI---DHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTLRIH-REFDPEAVLAAIERHRLTCA 242 (497)
T ss_pred EEEecHHHHHHHH---HHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEEEEC-CcCCHHHHHHHHHHhCCeEE
Confidence 4688988875443 23345689999998887765322 223345566777776554 45678888999999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
+..+.....+..
T Consensus 243 ~~~P~~~~~ll~ 254 (497)
T PRK06145 243 WMAPVMLSRVLT 254 (497)
T ss_pred EehHHHHHHHHc
Confidence 988766655443
No 336
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=26.78 E-value=2.8e+02 Score=26.22 Aligned_cols=14 Identities=14% Similarity=0.169 Sum_probs=5.7
Q ss_pred CCCcccEEeccHHH
Q 036361 200 TSSPKGVVHSHRGI 213 (485)
Q Consensus 200 TG~pK~v~~s~~~~ 213 (485)
+|..-|.+...+.+
T Consensus 218 ~GlRiG~~v~~~~~ 231 (351)
T PRK14807 218 AGLRVGYAVANENI 231 (351)
T ss_pred chhceeeeecCHHH
Confidence 33333444444433
No 337
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=26.77 E-value=3.5e+02 Score=26.74 Aligned_cols=57 Identities=9% Similarity=-0.030 Sum_probs=26.3
Q ss_pred EEcCCchhHHH-HHHhhhccCceEEecCCCCCH--HHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 69 VVAPNVPSMYE-LQFGVPMSGAILNNINTRLDA--HNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 69 l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
+..+++...+. ++.++++.|-.++..+..+.. .-+...+.+.+++..+++....+.+
T Consensus 83 v~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l 142 (433)
T PRK08134 83 IATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGW 142 (433)
T ss_pred EEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHH
Confidence 45555544443 334455555544443333321 2223334556666666665433333
No 338
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=26.64 E-value=3e+02 Score=26.57 Aligned_cols=51 Identities=18% Similarity=0.164 Sum_probs=22.0
Q ss_pred EEcCCchhHHH-HHHhhhccCceEEecCCCCCH--HHHHHHhhhcCCcEEEEcC
Q 036361 69 VVAPNVPSMYE-LQFGVPMSGAILNNINTRLDA--HNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 69 l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~ 119 (485)
++.+++.+.+. ++.+++..|-.++..+|.+.. ..+..+......++.+++.
T Consensus 70 ~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~ 123 (382)
T TIGR02080 70 VVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ 123 (382)
T ss_pred EEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC
Confidence 34444444333 233455556555555555542 1122233333455555543
No 339
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=26.30 E-value=3.6e+02 Score=26.00 Aligned_cols=92 Identities=11% Similarity=-0.018 Sum_probs=59.2
Q ss_pred cCCCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHH
Q 036361 27 YSDCPSIVYNNT--TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLS 104 (485)
Q Consensus 27 ~p~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (485)
.+.++.+-..+. +=|+++ +...+.+.+ +.+.+..+ -.+....+-.-....++|.+.|..+..+=|...+..-.
T Consensus 13 ~g~~i~~K~E~~~ptgS~K~-R~a~~~i~~-~~~~~~~~---~vv~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~ 87 (380)
T TIGR01127 13 TGSEVYLKLENLQKTGSFKI-RGALNKIAN-LSEDQRQR---GVVAASAGNHAQGVAYAAKKFGIKAVIVMPESAPPSKV 87 (380)
T ss_pred hCCeEEEEecCCCCCCCcHH-HHHHHHHHh-cchhccCC---EEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCcHHHH
Confidence 344566665553 444443 223333333 33334332 24555667777888889999998888777777777778
Q ss_pred HHhhhcCCcEEEEcCcchH
Q 036361 105 VLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 105 ~~l~~~~~~~ii~~~~~~~ 123 (485)
..++..++++++++....+
T Consensus 88 ~~~~~~GA~V~~~~~~~~~ 106 (380)
T TIGR01127 88 KATKSYGAEVILHGDDYDE 106 (380)
T ss_pred HHHHHCCCEEEEECCCHHH
Confidence 8899999999999764333
No 340
>PF00156 Pribosyltran: Phosphoribosyl transferase domain; InterPro: IPR000836 The name PRT comes from phosphoribosyltransferase (PRTase) enzymes, which carry out phosphoryl transfer reactions on 5-phosphoribosyl-alpha1-pyrophosphate PRPP, an activated form of ribose-5-phosphate. Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage []. This includes a range of diverse phosphoribosyl transferase enzymes including adenine phosphoribosyltransferase (2.4.2.7 from EC); hypoxanthine-guanine-xanthine phosphoribosyltransferase; hypoxanthine phosphoribosyltransferase (2.4.2.8 from EC); ribose-phosphate pyrophosphokinase (2.7.6.1 from EC); amidophosphoribosyltransferase (2.4.2.14 from EC); orotate phosphoribosyltransferase (2.4.2.10 from EC);uracil phosphoribosyltransferase (2.4.2.9 from EC); and xanthine-guanine phosphoribosyltransferase (2.4.2.22 from EC). Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. Members of PRT are defined by the protein fold and by a short 13-residue sequence motif, The motif consists of four hydrophobic amino acids, two acidic amino acids and seven amino acids of variable character, usually including glycine and threonine. The motif has been predicted to be a PRPP-binding site in advance of structural information [, ]. Apart of this motif, different PRT proteins have a low level of sequence identity, less than 15%. The PRT sequence motif is only found in PRTases from the nucleotide synthesis and salvage pathways. Other PRTases, from the tryptophan, histidine and nicotinamide synthetic and salvage pathways, lack the PRT sequence motif and appear to be unrelated to each other and unrelated to the PRT family.; GO: 0009116 nucleoside metabolic process; PDB: 2JBH_A 1Y0B_D 2FXV_B 1GPH_1 1AO0_D 1ORO_B 1VCH_C 2WNS_A 2PRZ_B 2PS1_A ....
Probab=26.26 E-value=1.7e+02 Score=22.48 Aligned_cols=27 Identities=7% Similarity=0.053 Sum_probs=23.1
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCC
Q 036361 39 TYTWSETHRRCLQVASSLSSVGIQRGH 65 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi~~gd 65 (485)
-++|.++.+.++.+|..|.+.+.+...
T Consensus 4 ~~~~~~~~~~~~~la~~i~~~~~~~~~ 30 (125)
T PF00156_consen 4 ILSPEQIEALAERLAEQIKESGFDFDV 30 (125)
T ss_dssp EEBHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred EEcHHHHHHHHHHHHHHHHHhCCCCCE
Confidence 479999999999999999998775544
No 341
>PRK07868 acyl-CoA synthetase; Validated
Probab=26.15 E-value=6.5e+02 Score=28.17 Aligned_cols=81 Identities=12% Similarity=0.071 Sum_probs=60.6
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecc
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGA 283 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~ 283 (485)
.+|.+.+...+..+... .++.+++++...++-.-.+ +..+++++..|+..+..+.. ..+...++..++..++..
T Consensus 472 ~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~-v~a~lA~~~aGav~vpl~p~--~~l~~il~~s~~~~li~~ 548 (994)
T PRK07868 472 VHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSA-LVAIAALSRLGAVAVLMPPD--TDLAAAVRLGGVTEIITD 548 (994)
T ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhcCCEEEEeCCc--hhHHHHHhccCCeEEEEC
Confidence 57888888777665554 4788999998888765543 34567888889988887752 567788888899998887
Q ss_pred hHHHHHH
Q 036361 284 PVVLNMI 290 (485)
Q Consensus 284 p~~~~~l 290 (485)
+..+..+
T Consensus 549 ~~~~~~~ 555 (994)
T PRK07868 549 PTNLEAA 555 (994)
T ss_pred hHHHHHH
Confidence 7766554
No 342
>COG1916 Uncharacterized homolog of PrgY (pheromone shutdown protein) [Function unknown]
Probab=25.95 E-value=1.7e+02 Score=27.69 Aligned_cols=77 Identities=12% Similarity=0.104 Sum_probs=54.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCC-----------eeeeHHHHHHHHHH---HHHHHHH---------cCCCCCCEEE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNN-----------TTYTWSETHRRCLQ---VASSLSS---------VGIQRGHVVS 68 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~-----------~~~Ty~~l~~~~~~---lA~~L~~---------~gi~~gd~V~ 68 (485)
.+.++.+.=+..-+..||.+|+.-+. ..++..|..+.-+. +++++.+ .|++||
T Consensus 23 S~~SveeVrr~I~~~~PDaVAVELd~~R~~sLl~~~~~~ldl~~vlk~Gk~~~~l~~~lLa~~Qrklg~~~Gv~PG---- 98 (388)
T COG1916 23 SKDSVEEVRRIILEEKPDAVAVELDEARLLSLLGGSREELDLAQVLKEGKAFFLLAGLLLAYFQRKLGKELGVKPG---- 98 (388)
T ss_pred CHhHHHHHHHHHHhcCCCeEEEEecHHHHHHHhcCCcccCCHHHHHHcCchHHHHHHHHHHHHHHHHHHhcCCCCh----
Confidence 34556666666777899999998654 24777777644322 2222222 377776
Q ss_pred EEcCCchhHHHHHHhhhccCceEEecCCCC
Q 036361 69 VVAPNVPSMYELQFGVPMSGAILNNINTRL 98 (485)
Q Consensus 69 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~ 98 (485)
.|+..++-++..+|+.+.++|.+.
T Consensus 99 ------sEmk~AIe~A~e~ga~V~lIDRdI 122 (388)
T COG1916 99 ------SEMKAAIEAARELGAPVALIDRDI 122 (388)
T ss_pred ------HHHHHHHHHHHHcCCCEEEecccH
Confidence 599999999999999999998774
No 343
>PRK08246 threonine dehydratase; Provisional
Probab=25.71 E-value=4.8e+02 Score=24.32 Aligned_cols=59 Identities=12% Similarity=0.028 Sum_probs=44.8
Q ss_pred CCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 63 RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 63 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
+++.| +....+-.-..+.++|.+.|..+..+-|...+......++..++++++++....
T Consensus 67 ~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~ 125 (310)
T PRK08246 67 PAAGV-VAASGGNAGLAVAYAAAALGVPATVFVPETAPPAKVARLRALGAEVVVVGAEYA 125 (310)
T ss_pred cCCeE-EEeCCCHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHCCCEEEEeCCCHH
Confidence 45555 444557777788888899998877777766667778899999999999986533
No 344
>PRK06721 threonine synthase; Reviewed
Probab=25.55 E-value=2.7e+02 Score=26.58 Aligned_cols=57 Identities=7% Similarity=-0.106 Sum_probs=40.5
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCC-CHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRL-DAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
..+....+-.-..+.++|...|..+..+-|.. .+......++..++++++++....+
T Consensus 77 ~vV~aSsGN~G~alA~~aa~~G~~~~vvvp~~~~~~~k~~~~~~~GA~V~~~~~~~~~ 134 (352)
T PRK06721 77 AIICASTGNTSASAAAYAARLGMKCIIVIPEGKIAHGKLAQAVAYGAEIISIEGNFDD 134 (352)
T ss_pred EEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 33444566666777888899998877776654 3455566788999999999865433
No 345
>PF00291 PALP: Pyridoxal-phosphate dependent enzyme; InterPro: IPR001926 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. Pyridoxal-5'-phosphate-dependent enzymes (B6 enzymes) catalyze manifold reactions in the metabolism of amino acids. Most of these enzymes can be assigned to one of three different families of homologous proteins, the alpha, beta and gamma families. The alpha and gamma family might be distantly related with one another, but are clearly not homologous with the beta family. The beta family includes L- and D-serine dehydratase, threonine dehydratase, the beta subunit of tryptophan synthase, threonine synthase and cysteine synthase. These enzymes catalyze beta-replacement or beta-elimination reactions []. Comparison of sequences from eukaryotic, archebacterial, and eubacterial species indicates that the functional specialization of most B6 enzymes has occurred already in the universal ancestor cell. The cofactor pyridoxal-5-phosphate must have emerged very early in biological evolution; conceivably, organic cofactors and metal ions were the first biological catalysts []. The 3D structure of the beta-subunit of tryptophan synthase has been solved. The subunit has two domains that are approximately the same size and similar to each other in folding pattern. Each has a core containing a four-stranded parallel beta-sheet with three helices on its inner side and one on the outer side. The cofactor is bound at the interface between the domains [].; GO: 0003824 catalytic activity, 0030170 pyridoxal phosphate binding, 0008152 metabolic process; PDB: 1P5J_A 2D1F_B 3AEY_B 3AEX_B 3IAU_A 2Q3B_A 2Q3D_A 2Q3C_A 1TZJ_A 1RQX_D ....
Probab=25.07 E-value=3.3e+02 Score=25.01 Aligned_cols=57 Identities=12% Similarity=0.027 Sum_probs=46.0
Q ss_pred CCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 63 RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 63 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.++.| +....+-.-..+.++|...|..++.+-|...+......++..+++++.+...
T Consensus 55 ~~~~v-v~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 111 (306)
T PF00291_consen 55 GGRTV-VGASSGNHGRALAYAAARLGLKCTIVVPEDVSPEKLKQMRALGAEVILVPGD 111 (306)
T ss_dssp TTSEE-EEESSSHHHHHHHHHHHHHTCEEEEEEETTSHHHHHHHHHHTTCEEEEESST
T ss_pred cccee-eeeccCCceehhhhhhhhccccceeeeccccccccccceeeecceEEEcccc
Confidence 34556 7777788888888899999998888877777777888999999999988664
No 346
>cd01524 RHOD_Pyr_redox Member of the Rhodanese Homology Domain superfamily. Included in this CD are the Lactococcus lactis NADH oxidase, Bacillus cereus NADH dehydrogenase, and Bacteroides thetaiotaomicron pyridine nucleotide-disulphide oxidoreductase, and similar rhodanese-like domains found C-terminal of the pyridine nucleotide-disulphide oxidoreductase (Pyr-redox) domain and the Pyr-redox dimerization domain.
Probab=24.83 E-value=2.6e+02 Score=19.91 Aligned_cols=43 Identities=12% Similarity=0.004 Sum_probs=29.4
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
..+++.++..... .+.++..|.++|.++.....+...+.+.|.
T Consensus 34 ~~ip~~~~~~~~~---------~~~~~~~vvl~c~~g~~a~~~a~~L~~~G~ 76 (90)
T cd01524 34 INIPLDELRDRLN---------ELPKDKEIIVYCAVGLRGYIAARILTQNGF 76 (90)
T ss_pred EeCCHHHHHHHHH---------hcCCCCcEEEEcCCChhHHHHHHHHHHCCC
Confidence 4677776654322 256778899999987666666666677776
No 347
>PRK05638 threonine synthase; Validated
Probab=24.44 E-value=2.4e+02 Score=27.95 Aligned_cols=91 Identities=10% Similarity=0.022 Sum_probs=55.4
Q ss_pred CCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 29 DCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 29 ~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
.++.+-... -+-||++ +.....+...+. .| .++| +....+-.-..+.+.|.++|..+..+-|...+..-...
T Consensus 80 ~~l~~K~E~~nPtGSfKd-R~a~~~i~~a~~-~g---~~~v-v~aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~ 153 (442)
T PRK05638 80 ENVYIKDETRNPTGSFRD-RLATVAVSYGLP-YA---ANGF-IVASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQ 153 (442)
T ss_pred CeEEEEeCCCCCCCChHH-HHHHHHHHHHHH-cC---CCEE-EEeCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHH
Confidence 345555443 4556665 222333333332 23 2344 44566666666777778899877766666555666778
Q ss_pred hhhcCCcEEEEcCcchHHH
Q 036361 107 LQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 107 l~~~~~~~ii~~~~~~~~~ 125 (485)
++..++++++++....+..
T Consensus 154 ~~~~GA~vi~v~~~~~~~~ 172 (442)
T PRK05638 154 MIAFGAKIIRYGESVDEAI 172 (442)
T ss_pred HHhcCcEEEEECCCHHHHH
Confidence 9999999999986544443
No 348
>TIGR02981 phageshock_pspE phage shock operon rhodanese PspE. Members of this very narrowly defined protein family are proteins active as rhodanese (EC 2.8.1.1) and found in the extended variants of the phage shock protein (psp operon) in Escherichia coli and a few closely related species. Note that the designation phage shock protein PspE has been applied, incorrectly, in many instances where the genome lacks the phage shock regulon entirely.
Probab=24.12 E-value=2.5e+02 Score=20.96 Aligned_cols=49 Identities=6% Similarity=-0.077 Sum_probs=35.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
..+.+.++.+. +...+..+...|.++|.++.....+...+...|..-+-
T Consensus 39 inip~~~l~~~-------l~~~~~~~~~~vvlyC~~G~rS~~aa~~L~~~G~~~v~ 87 (101)
T TIGR02981 39 INIPLKEIKEH-------IATAVPDKNDTVKLYCNAGRQSGMAKDILLDMGYTHAE 87 (101)
T ss_pred EECCHHHHHHH-------HHHhCCCCCCeEEEEeCCCHHHHHHHHHHHHcCCCeEE
Confidence 45777766543 33334456778999999999888888888899976443
No 349
>PF11142 DUF2917: Protein of unknown function (DUF2917); InterPro: IPR021317 This bacterial family of proteins appears to be restricted to Proteobacteria.
Probab=23.89 E-value=1.8e+02 Score=19.58 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=26.4
Q ss_pred cEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEc
Q 036361 393 GEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKD 441 (485)
Q Consensus 393 Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~g 441 (485)
|.+|++-.+- + .|-|+..||...+...+++++.+
T Consensus 25 G~vWlT~~g~-------~--------~D~~L~~G~~l~l~~g~~vvl~a 58 (63)
T PF11142_consen 25 GRVWLTREGD-------P--------DDYWLQAGDSLRLRRGGRVVLSA 58 (63)
T ss_pred ccEEEECCCC-------C--------CCEEECCCCEEEeCCCCEEEEEe
Confidence 8899876431 1 26699999999999888888766
No 350
>PRK07503 methionine gamma-lyase; Provisional
Probab=23.81 E-value=3.9e+02 Score=26.01 Aligned_cols=13 Identities=15% Similarity=0.153 Sum_probs=6.8
Q ss_pred cEEeccHHHHHHH
Q 036361 205 GVVHSHRGIFILT 217 (485)
Q Consensus 205 ~v~~s~~~~~~~~ 217 (485)
|++...+.+....
T Consensus 222 G~v~~~~~l~~~l 234 (403)
T PRK07503 222 GLVVGGKALADRI 234 (403)
T ss_pred EEEEcCHHHHHHH
Confidence 5555555554444
No 351
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=23.77 E-value=3.2e+02 Score=23.96 Aligned_cols=83 Identities=14% Similarity=0.132 Sum_probs=52.6
Q ss_pred hhhHhHHHHHHHHHhh-cceEeec-ccCCHHHHHHHHHhcCceeeecchHHHHHHhC------CCCCCCCCCCceEEecc
Q 036361 238 MFHANGWGYTWGMAAV-GATNICL-RRFDASAISDLIQKHNVTHMCGAPVVLNMISN------SPDFEPLKTPVQILTAG 309 (485)
Q Consensus 238 ~~~~~g~~~~~~~l~~-G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~------~~~~~~l~~lr~i~~~g 309 (485)
--|..|-..+...+-. |--++=. +.--++.+.+..++++++.+..+-.+=..+.. ..+...++.--.+.+||
T Consensus 115 DvHdIGk~iV~~ml~~aGfevidLG~dvP~e~fve~a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~v~vGG 194 (227)
T COG5012 115 DVHDIGKNIVATMLEAAGFEVIDLGRDVPVEEFVEKAKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVIVMVGG 194 (227)
T ss_pred cHHHHHHHHHHHHHHhCCcEEEecCCCCCHHHHHHHHHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeEEeecC
Confidence 3677777666555533 3333333 24567899999999999998876544333322 22445555555677899
Q ss_pred CCCChhhhhhh
Q 036361 310 APPPAPVLSRT 320 (485)
Q Consensus 310 ~~l~~~~~~~~ 320 (485)
.+++.+....+
T Consensus 195 Apvtq~~a~~i 205 (227)
T COG5012 195 APVTQDWADKI 205 (227)
T ss_pred ccccHHHHHHh
Confidence 99988765554
No 352
>TIGR02991 ectoine_eutB ectoine utilization protein EutB. Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.
Probab=23.74 E-value=4.5e+02 Score=24.60 Aligned_cols=53 Identities=13% Similarity=0.068 Sum_probs=42.2
Q ss_pred EEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc
Q 036361 69 VVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 69 l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
+....+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 71 v~aSsGN~g~alA~~a~~~G~~~~v~~p~~~~~~k~~~~~~~GA~V~~~~~~~ 123 (317)
T TIGR02991 71 VAASTGNHGRALAYAAAEEGVRATICMSELVPQNKVDEIRRLGAEVRIVGRSQ 123 (317)
T ss_pred EEECCCHHHHHHHHHHHHhCCCEEEEcCCCCCHHHHHHHHHcCCEEEEeCCCH
Confidence 45556777788888999999988777676666677788999999999998753
No 353
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=23.68 E-value=4.4e+02 Score=26.65 Aligned_cols=77 Identities=12% Similarity=-0.016 Sum_probs=56.6
Q ss_pred EeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|...+...+..... ..++.+++++...++-...+ ...+++++..|+..+..+ .+...++...++..++..++.
T Consensus 46 ~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~-~~~~la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~ 124 (541)
T TIGR03205 46 PITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDH-PINFFGALKAGARVVHLSPLDGERALSHKLSDSGARLLIT 124 (541)
T ss_pred EeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHH-HHHHHHHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEE
Confidence 5788887666555444 34788999998888865543 334677778888887665 467889999999999999886
Q ss_pred ch
Q 036361 283 AP 284 (485)
Q Consensus 283 ~p 284 (485)
..
T Consensus 125 ~~ 126 (541)
T TIGR03205 125 SD 126 (541)
T ss_pred eC
Confidence 53
No 354
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.60 E-value=4.1e+02 Score=24.05 Aligned_cols=84 Identities=13% Similarity=0.136 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCH---HHHHHHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDA---HNLSVLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~---~~l~~~l~~~~~~~ii 116 (485)
++++.++...+-+.+.+. .+ + .+..+...+...++.-.|++-..+.. .-....++ .++...+++.++++||
T Consensus 147 ~~~~~~~L~~l~~~~~~~~~~~-~-~~~~v~~H~af~Y~~~~ygl~~~~~~--~~~~eps~~~l~~l~~~ik~~~v~~if 222 (266)
T cd01018 147 LDALLAELDALDSEIRTILSKL-K-QRAFMVYHPAWGYFARDYGLTQIPIE--EEGKEPSPADLKRLIDLAKEKGVRVVF 222 (266)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-C-CCeEEEECchhHHHHHHcCCEEEecC--CCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 344555555555555542 22 3 34566677788888888887766532 11122234 3456677888999999
Q ss_pred EcCcchHHHHHHh
Q 036361 117 VDHLHSSLVLEAL 129 (485)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (485)
++........+.+
T Consensus 223 ~e~~~~~~~~~~l 235 (266)
T cd01018 223 VQPQFSTKSAEAI 235 (266)
T ss_pred EcCCCCcHHHHHH
Confidence 9877666544443
No 355
>PRK08526 threonine dehydratase; Provisional
Probab=23.58 E-value=5.3e+02 Score=25.20 Aligned_cols=95 Identities=8% Similarity=-0.059 Sum_probs=59.2
Q ss_pred CCCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHH
Q 036361 28 SDCPSIVYNNT--TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSV 105 (485)
Q Consensus 28 p~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~ 105 (485)
+.++.+-..+. +-||+ .+...+.+.+...+.+ .+| | +....+-.-....++|.++|..+..+=|...+..-..
T Consensus 34 g~~iylK~E~lqptGSfK-~RgA~n~i~~l~~~~~-~~g--V-V~aSaGNhg~avA~aa~~~Gi~~~IvmP~~~p~~k~~ 108 (403)
T PRK08526 34 GAEVYLKKENLQITGAYK-IRGAYNKIANLSEEQK-QHG--V-IAASAGNHAQGVAISAKKFGIKAVIVMPEATPLLKVS 108 (403)
T ss_pred CCeEEEEecCCCCCCCCH-HHHHHHHHHhccHhhc-CCE--E-EEECccHHHHHHHHHHHHcCCCEEEEEcCCCCHHHHH
Confidence 34566666654 33333 2333334443333322 233 3 4466677788888899999988777777766655567
Q ss_pred HhhhcCCcEEEEcCcchHHHHH
Q 036361 106 LLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 106 ~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
.++..++++++++....+....
T Consensus 109 ~~r~~GA~Vv~~g~~~~~a~~~ 130 (403)
T PRK08526 109 GTKALGAEVILKGDNYDEAYAF 130 (403)
T ss_pred HHHhCCCEEEEECCCHHHHHHH
Confidence 7899999999998754444333
No 356
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=23.43 E-value=4.8e+02 Score=24.75 Aligned_cols=77 Identities=8% Similarity=-0.064 Sum_probs=41.9
Q ss_pred eHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc-hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 41 TWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV-PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~-~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.|.++.+.+++....| .|.+++....++..++ .-+..++.++...|...+.+.+......+..+.+..+.+++.+.-
T Consensus 32 ~~~~~~~~~r~~la~l--~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 32 DYNIVVEQIRQQLLAL--ATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHHH--hCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 3555555554443333 3566654445555554 445555556666665544444444444455666777777777643
No 357
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=23.28 E-value=5.6e+02 Score=25.54 Aligned_cols=64 Identities=9% Similarity=0.091 Sum_probs=46.7
Q ss_pred cchhHHHHHHHhhc-----CCCcEEEeCC-eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 036361 14 LTTLGFLERAATAY-----SDCPSIVYNN-TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY 78 (485)
Q Consensus 14 ~tl~~~l~~~a~~~-----p~~~a~~~~~-~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~ 78 (485)
..+.+.+++....+ -+..|+...+ ...+|+++.+.++.++..+.+. ++++..+.|++.+..-=+
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~g~~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKv 422 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALPGKPNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKV 422 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHH
Confidence 56667776665553 3356666655 6899999999999999999875 667777777777765433
No 358
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=23.20 E-value=5.7e+02 Score=25.36 Aligned_cols=59 Identities=14% Similarity=0.127 Sum_probs=38.4
Q ss_pred HHHcCCC--CCCEEEEEcCCchhHHHHHHhhhccCceEEecCC-------CCCHHHHHHHhhhc--CCcEEEE
Q 036361 56 LSSVGIQ--RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-------RLDAHNLSVLLQHS--ESKLVFV 117 (485)
Q Consensus 56 L~~~gi~--~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-------~~~~~~l~~~l~~~--~~~~ii~ 117 (485)
|...+.+ +|+.|.+ .++ .+..+.-|+..+|+.++.+++ ....+.++..++.. +...+++
T Consensus 141 L~alr~~~~~gd~VI~-p~~--th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv 210 (444)
T TIGR03531 141 LSALRHKRPKAKYVIW-PRI--DQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVL 210 (444)
T ss_pred HHHcCCcCCCCCEEEE-ECc--ChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEE
Confidence 4445543 4775543 333 377778899999998888874 34678888888753 3445444
No 359
>PLN02238 hypoxanthine phosphoribosyltransferase
Probab=23.16 E-value=2.2e+02 Score=24.32 Aligned_cols=22 Identities=18% Similarity=0.261 Sum_probs=19.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHc
Q 036361 38 TTYTWSETHRRCLQVASSLSSV 59 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~ 59 (485)
.-+||.|+.+++.++|..+.+.
T Consensus 10 ~lis~~~I~~~i~~lA~~I~~~ 31 (189)
T PLN02238 10 VLWTAEDISARVAELAAQIASD 31 (189)
T ss_pred EEcCHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999884
No 360
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=22.96 E-value=5.1e+02 Score=22.58 Aligned_cols=85 Identities=2% Similarity=-0.020 Sum_probs=58.3
Q ss_pred CCeeeeHHHHHHHHHHHHHHHH-------HcC-C-CCCCEEEEEcCCc----hhHHHHHHhhhccCceEEecCCCCCHHH
Q 036361 36 NNTTYTWSETHRRCLQVASSLS-------SVG-I-QRGHVVSVVAPNV----PSMYELQFGVPMSGAILNNINTRLDAHN 102 (485)
Q Consensus 36 ~~~~~Ty~~l~~~~~~lA~~L~-------~~g-i-~~gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 102 (485)
....+|-.|.+-.++.+...|. ... - +..-+|.+.+..+ .-..+.-..+-..|.-++-|..+.|.++
T Consensus 51 ~~gei~vaqe~~as~~~~~~l~~l~~~l~~~~~~~~~~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~ 130 (213)
T cd02069 51 GAGKMFLPQVLKSARVMKAAVAYLEPYMEKEKGENSSKGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIEK 130 (213)
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHHH
Confidence 3457777777766555554332 222 1 1233666666654 3344445555678999999999999999
Q ss_pred HHHHhhhcCCcEEEEcCc
Q 036361 103 LSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 103 l~~~l~~~~~~~ii~~~~ 120 (485)
+...+.+.+|++|..+..
T Consensus 131 ~v~~~~~~~~~~V~lS~~ 148 (213)
T cd02069 131 ILEAAKEHKADIIGLSGL 148 (213)
T ss_pred HHHHHHHcCCCEEEEccc
Confidence 999999999999998753
No 361
>TIGR01203 HGPRTase hypoxanthine phosphoribosyltransferase. Sequence differences as small as a single residue can affect whether members of this family act on hypoxanthine and guanine or hypoxanthine only. The designation of this model as equivalog reflects hypoxanthine specificity and does not reflect whether or not guanine can replace hypoxanthine.
Probab=22.91 E-value=3.9e+02 Score=22.14 Aligned_cols=45 Identities=9% Similarity=0.002 Sum_probs=28.5
Q ss_pred eeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhh
Q 036361 40 YTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVP 85 (485)
Q Consensus 40 ~Ty~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~ 85 (485)
+||.|+.+.+.++|..+.+. +- ....|.-....+..+...+.-.+
T Consensus 3 is~~~i~~~i~~lA~~I~~~~~~-~~~vvv~i~~GG~~~a~~l~~~L 48 (166)
T TIGR01203 3 IPEEQIKARIAELAKQITEDYAG-KPLVLLCVLKGSFPFFADLIRYI 48 (166)
T ss_pred cCHHHHHHHHHHHHHHHHHHcCC-CCeEEEEEccCCHHHHHHHHHhc
Confidence 79999999999999999884 11 22333334444555544443333
No 362
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=22.81 E-value=2.9e+02 Score=22.95 Aligned_cols=96 Identities=17% Similarity=0.165 Sum_probs=57.4
Q ss_pred HHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc----hhHHHHHHhhhccCceEEecCC
Q 036361 21 ERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV----PSMYELQFGVPMSGAILNNINT 96 (485)
Q Consensus 21 ~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~ 96 (485)
-++++..++...+.+.++.+|=+=.. .+.++|++|.++|+.+ |+|..----. .+.+.-.++ -....++--+.|
T Consensus 7 mRHgkA~~~~~~~~D~dR~Lt~~G~~-ea~~~a~~L~~~~~~~-D~VL~Spa~Ra~QTae~v~~~~~-~~~~~~~~~l~p 83 (163)
T COG2062 7 MRHGKAEWAAPGIADFDRPLTERGRK-EAELVAAWLAGQGVEP-DLVLVSPAVRARQTAEIVAEHLG-EKKVEVFEELLP 83 (163)
T ss_pred eecccccccCCCCCCccCcCCHHHHH-HHHHHHHHHHhcCCCC-CEEEeChhHHHHHHHHHHHHhhC-cccceeccccCC
Confidence 45666677777777888888866554 5889999999999844 3333322112 333333333 122244455556
Q ss_pred CCCHHHHHHHhhhcC---CcEEEEcC
Q 036361 97 RLDAHNLSVLLQHSE---SKLVFVDH 119 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~---~~~ii~~~ 119 (485)
...+..+...++... ..++++.+
T Consensus 84 ~~d~~~~l~~l~~~~d~v~~vllVgH 109 (163)
T COG2062 84 NGDPGTVLDYLEALGDGVGSVLLVGH 109 (163)
T ss_pred CCCHHHHHHHHHHhcccCceEEEECC
Confidence 667777666666555 35666654
No 363
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=22.79 E-value=6.7e+02 Score=25.25 Aligned_cols=97 Identities=16% Similarity=-0.043 Sum_probs=61.0
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCC-CCCCEEEEecchhhHhHHHHHHHHHhhcceEeecccC--
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAV-PKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRRF-- 263 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~-- 263 (485)
++.++++.-.+++ ...+|.+.+...+......+.- .+++++...++.+..+ +..+++++..|+.+++.+..
T Consensus 16 ~~~~a~~~~~~~~-----~~~~ty~el~~~~~~lA~~L~~~~~g~~V~l~~~~~~e~-~~~~la~~~~G~~~~~~~~~~~ 89 (525)
T PRK05851 16 GRDLVVLDRESGL-----WRRHPWPEVHGRAENVAARLLDRDRPGAVGLVGEPTVEL-VAAIQGAWLAGAAVSILPGPVR 89 (525)
T ss_pred CCceEEeCCCCCc-----ceeecHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCCHHH-HHHHHHHHHcCCCCcCCCCCCC
Confidence 4455555433332 3578888888877776665532 6888888888765553 34467888888775544321
Q ss_pred --C----HHHHHHHHHhcCceeeecchHHHHH
Q 036361 264 --D----ASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 264 --~----~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
+ ...+...+...++..++..+..+..
T Consensus 90 ~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~ 121 (525)
T PRK05851 90 GADDGRWADATLTRFAGIGVRTVLSHGSHLER 121 (525)
T ss_pred ccchhhHHHHHHHHHHhcCCCEEEeCHHHHHH
Confidence 1 1344556777888888877765543
No 364
>PRK12483 threonine dehydratase; Reviewed
Probab=22.74 E-value=4.6e+02 Score=26.66 Aligned_cols=94 Identities=9% Similarity=0.052 Sum_probs=60.5
Q ss_pred CcEEEeCCee--eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHh
Q 036361 30 CPSIVYNNTT--YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLL 107 (485)
Q Consensus 30 ~~a~~~~~~~--~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 107 (485)
.+.+-..+.+ -|| ..+...+.+.+...+. .++| .+....+-......++|..+|..+..+=|...+..-...+
T Consensus 53 ~IylK~E~lqptGSf-K~RGA~n~i~~l~~~~-~~~G---VV~aSaGNha~gvA~aA~~lGi~~~IvmP~~tp~~Kv~~~ 127 (521)
T PRK12483 53 QVLLKREDLQPVFSF-KIRGAYNKMARLPAEQ-LARG---VITASAGNHAQGVALAAARLGVKAVIVMPRTTPQLKVDGV 127 (521)
T ss_pred EEEEEEcCCCCCCch-HHHHHHHHHHHhHHHH-hcCc---EEEECCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHH
Confidence 4455444432 345 3344444555433232 2344 4556667788888889999999888877777666677889
Q ss_pred hhcCCcEEEEcCcchHHHHHH
Q 036361 108 QHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 108 ~~~~~~~ii~~~~~~~~~~~~ 128 (485)
+..+++++++.....+....+
T Consensus 128 r~~GAeVil~g~~~d~a~~~A 148 (521)
T PRK12483 128 RAHGGEVVLHGESFPDALAHA 148 (521)
T ss_pred HHCCCEEEEECCCHHHHHHHH
Confidence 999999999986544443333
No 365
>PF08967 DUF1884: Domain of unknown function (DUF1884); InterPro: IPR014418 This group represents an uncharacterised conserved protein.; PDB: 2PK8_A.
Probab=22.71 E-value=2.3e+02 Score=20.21 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 44 ETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 44 ~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
++.+.++..++.|..-|+.|. |.++.|--.+++..- ..-.+|.. .+.+++.+.++|++|.....
T Consensus 9 ~il~~ie~~inELk~dG~ePD--ivL~G~ef~e~~~~~-~l~~~~lk-------------vy~i~ELg~DAVvaDSk~LG 72 (85)
T PF08967_consen 9 RILELIEEKINELKEDGFEPD--IVLVGPEFYEFLSEE-VLEVSGLK-------------VYVIEELGSDAVVADSKYLG 72 (85)
T ss_dssp HHHHHHHHHHHHHHHTT------EEEE-HHHHHHHHH----EETTEE-------------EEE-GGGTTEEEEE-TTTTT
T ss_pred HHHHHHHHHHHHHHhcCCCCC--EEEEcHHHHHHHHHH-HHHhhCce-------------EEEHHhcCCceEEEchHHhc
Confidence 456678888999999999987 888888877776441 01112211 24567789999999987766
Q ss_pred HHHH
Q 036361 124 LVLE 127 (485)
Q Consensus 124 ~~~~ 127 (485)
.+..
T Consensus 73 ~~~~ 76 (85)
T PF08967_consen 73 QLKK 76 (85)
T ss_dssp TSTT
T ss_pred cccc
Confidence 5443
No 366
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.70 E-value=5.8e+02 Score=23.62 Aligned_cols=76 Identities=8% Similarity=-0.011 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHH---HHHhhhccCceE--EecCCCCCHHHHHHHhhhcC----C
Q 036361 43 SETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYE---LQFGVPMSGAIL--NNINTRLDAHNLSVLLQHSE----S 112 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~---~~lA~~~~G~~~--v~l~~~~~~~~l~~~l~~~~----~ 112 (485)
+++.+....-...|.+. |++|+=.+.+..++...... -.=+|..+|..+ .-++.+.+.+++...+++.+ .
T Consensus 11 ~~i~~~l~~~v~~l~~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (293)
T PRK14185 11 AQIKQEIAAEVAEIVAKGGKRPHLAAILVGHDGGSETYVANKVKACEECGFKSSLIRYESDVTEEELLAKVRELNQDDDV 90 (293)
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 34444444444456554 88886655555555433332 244899999888 44666677777777666654 3
Q ss_pred cEEEEc
Q 036361 113 KLVFVD 118 (485)
Q Consensus 113 ~~ii~~ 118 (485)
+-|++.
T Consensus 91 ~GIlvq 96 (293)
T PRK14185 91 DGFIVQ 96 (293)
T ss_pred CeEEEe
Confidence 445543
No 367
>PLN02494 adenosylhomocysteinase
Probab=22.66 E-value=7.8e+02 Score=24.66 Aligned_cols=67 Identities=7% Similarity=-0.064 Sum_probs=50.6
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce--EEecCCCCCHHHHHHHhhhcCCcEEEEcCcc
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI--LNNINTRLDAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~--~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
.+.+..--+|-+|+.++.=.++..+.+..+...|+- ...-||..+.+.....|...+..+.=-..+.
T Consensus 37 ~~~~~~pl~G~~i~~~lHl~~kTa~L~~tL~~~GA~v~~~~~Np~sTqd~vaaal~~~gi~vfa~~g~~ 105 (477)
T PLN02494 37 EFGPSQPFKGARITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHAAAAIARDSAAVFAWKGET 105 (477)
T ss_pred HhhccCCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEcCCCccchHHHHHHHHhCCceEEEecCCC
Confidence 333333346899999999999999999999999995 4555778889999999888777744433333
No 368
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=22.65 E-value=1.6e+02 Score=27.68 Aligned_cols=41 Identities=17% Similarity=0.077 Sum_probs=31.6
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHhhhccCce
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAI 90 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~ 90 (485)
..++..|.+.|+.+.+.|.+++.++..+ .-+++.+...|..
T Consensus 89 ~~~~~~l~~~Gi~~~~~VVvY~~~g~~~a~r~~~~L~~~G~~ 130 (320)
T PLN02723 89 EAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHE 130 (320)
T ss_pred HHHHHHHHHcCCCCCCEEEEEcCCCcchHHHHHHHHHHcCCC
Confidence 5778889999999999999999876443 3445667777864
No 369
>PRK08638 threonine dehydratase; Validated
Probab=22.32 E-value=4.9e+02 Score=24.59 Aligned_cols=57 Identities=5% Similarity=-0.053 Sum_probs=44.0
Q ss_pred EEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 68 SVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 68 ~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
.+....+-.-....++|...|..+..+-|...+......++..++++++++....+.
T Consensus 78 vv~~SsGN~g~alA~~aa~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~~~~ 134 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALLGIDGKVVMPKGAPKSKVAATCGYGAEVVLHGDNFNDT 134 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHcCCCEEEEeCCCCcHHHHHHHHHcCCEEEEECcCHHHH
Confidence 444555777788888999999888877777666777888999999999997654433
No 370
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=22.32 E-value=2.2e+02 Score=25.63 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=51.9
Q ss_pred HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCC--HHHHHHHhh-hcCCcEEEEcC
Q 036361 52 VASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLD--AHNLSVLLQ-HSESKLVFVDH 119 (485)
Q Consensus 52 lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~-~~~~~~ii~~~ 119 (485)
+-..+.+.-..||.-=.+.||++.-+.+.--++--++.+-+|++|+.+ .+.+...++ ++.+|++|...
T Consensus 98 ~ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK~~F~tS 168 (375)
T KOG0633|consen 98 LIDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIKCIFLTS 168 (375)
T ss_pred HHHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCCCccccHHHHHHHHhccccceEEEEcC
Confidence 333445555678866778899999998888899999999999998865 566666665 45899999864
No 371
>PRK09177 xanthine-guanine phosphoribosyltransferase; Validated
Probab=22.20 E-value=2.8e+02 Score=22.79 Aligned_cols=38 Identities=21% Similarity=0.208 Sum_probs=27.3
Q ss_pred eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 036361 39 TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY 78 (485)
Q Consensus 39 ~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~ 78 (485)
-+||.|+.+.++++|..+.+.| + -+.|.-+...+.-+.
T Consensus 9 ~is~~~i~~~i~~la~~I~~~~-~-~d~vvgv~~GG~~fa 46 (156)
T PRK09177 9 PVSWDQLHRDARALAWRLLPAG-Q-WKGIIAVTRGGLVPA 46 (156)
T ss_pred EcCHHHHHHHHHHHHHHHHhhC-C-CCEEEEEecCCeehH
Confidence 4899999999999999998764 2 355555555454333
No 372
>PF00667 FAD_binding_1: FAD binding domain; InterPro: IPR003097 This domain is found in sulphite reductase, NADPH cytochrome P450 reductase, nitric oxide synthase and methionine synthase reductase. Flavoprotein pyridine nucleotide cytochrome reductases [] (FPNCR) catalyse the interchange of reducing equivalents between one-electron carriers and the two-electron-carrying nicotinamide dinucleotides. The enzymes include ferredoxin:NADP+reductases (FNR) [], plant and fungal NAD(P)H:nitrate reductases [, ], NADH:cytochrome b5 reductases [], NADPH:P450 reductases [], NADPH:sulphite reductases [], nitric oxide synthases [], phthalate dioxygenase reductase [], and various other flavoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3QFR_B 3FJO_A 3QFC_B 3QE2_B 3QFS_A 3QFT_A 2B5O_B 2QTZ_A 2QTL_A 2BPO_B ....
Probab=21.93 E-value=96 Score=27.15 Aligned_cols=29 Identities=24% Similarity=0.198 Sum_probs=20.3
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 59 VGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
...++||.++|+.+|..+.+-.++..+.+
T Consensus 40 l~Y~pGD~l~V~P~N~~~~V~~~l~~lgl 68 (219)
T PF00667_consen 40 LSYQPGDHLGVYPPNDPEEVERLLKRLGL 68 (219)
T ss_dssp G---TT-EEEEE-SSEHHHHHHHHHHHTS
T ss_pred CcccCCCEEEEEccCCHHHHHHHHHHhCC
Confidence 45689999999999999999888876643
No 373
>PRK07409 threonine synthase; Validated
Probab=21.90 E-value=3.1e+02 Score=26.09 Aligned_cols=56 Identities=7% Similarity=-0.125 Sum_probs=39.1
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCC-CHHHHHHHhhhcCCcEEEEcCcch
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRL-DAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
..+....+-.-..+.++|...|..+..+-|.. .+......++..++++++++....
T Consensus 80 ~iv~aSsGN~g~alA~~a~~~G~~~~ivvP~~~~~~~k~~~~~~~GA~Vi~~~~~~~ 136 (353)
T PRK07409 80 AVICASTGNTSASAAAYAARAGLKAFVLIPEGKIALGKLAQAVMYGAEIIQIDGNFD 136 (353)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEEcCCCCchhhHHHHHhcCCEEEEECCCHH
Confidence 34445666667888888999998876555553 344445567889999999987433
No 374
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=21.88 E-value=3.2e+02 Score=25.08 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=34.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----------CCHHHHHHHhhh-cCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----------LDAHNLSVLLQH-SESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----------~~~~~l~~~l~~-~~~~~ii~~ 118 (485)
+++||.|.+.-+...- ..-++...|+.++.+++. .+.+.+...+++ .++++++..
T Consensus 96 ~~~gd~Vlv~~~~h~s---~~~~~~~~g~~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~ 161 (294)
T cd00615 96 CGPGDKILIDRNCHKS---VINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVIT 161 (294)
T ss_pred CCCCCEEEEeCCchHH---HHHHHHHCCCEEEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5689988776554332 233445578777666542 457778887764 457766654
No 375
>PRK02991 D-serine dehydratase; Provisional
Probab=21.78 E-value=3.3e+02 Score=26.96 Aligned_cols=59 Identities=8% Similarity=-0.149 Sum_probs=45.5
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
..+....+-.-..+.++|...|..+..+=|...+......++..++++++++....+..
T Consensus 159 ~VV~aSsGN~G~alA~aA~~~G~~~tIvvP~~a~~~K~~~ir~~GAeVi~~~~~~~~a~ 217 (441)
T PRK02991 159 SIAVGSTGNLGLSIGIMSAALGFKVTVHMSADARQWKKDKLRSHGVTVVEYEGDYGVAV 217 (441)
T ss_pred EEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHH
Confidence 45556667778888889999998877776766677777889999999999987654443
No 376
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=21.69 E-value=3.9e+02 Score=25.19 Aligned_cols=61 Identities=10% Similarity=0.058 Sum_probs=52.0
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 60 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
-+.||..+.+=-..+-.-+...|.|...|..++..=|..=+.+-+.+|+..++.+|.++.+
T Consensus 99 ~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a 159 (362)
T KOG1252|consen 99 LITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILTPPA 159 (362)
T ss_pred CccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEecChH
Confidence 5788888888877788888889999999999888877777777788999999999999863
No 377
>PRK09629 bifunctional thiosulfate sulfurtransferase/phosphatidylserine decarboxylase; Provisional
Probab=21.58 E-value=1.6e+02 Score=30.62 Aligned_cols=41 Identities=12% Similarity=-0.028 Sum_probs=35.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+...+.+.|+.+++.|.++|..+.....+++++-.+|..
T Consensus 209 ~el~~~~~~~Gi~~~~~VVvYC~sG~rAa~~~~~L~~lG~~ 249 (610)
T PRK09629 209 QDMPEILRDLGITPDKEVITHCQTHHRSGFTYLVAKALGYP 249 (610)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCCChHHHHHHHHHHHcCCC
Confidence 45777788899999999999999998888888888888875
No 378
>PRK08198 threonine dehydratase; Provisional
Probab=21.30 E-value=4.9e+02 Score=25.31 Aligned_cols=61 Identities=8% Similarity=0.043 Sum_probs=45.2
Q ss_pred CCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 64 GHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 64 gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
++.| +....+-.-....++|...|..+..+=|...+..-...++..++++++++....+..
T Consensus 70 ~~~v-v~aSsGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vi~~~~~~~~~~ 130 (404)
T PRK08198 70 ARGV-VAASAGNHAQGVAYAASLLGIKATIVMPETAPLSKVKATRSYGAEVVLHGDVYDEAL 130 (404)
T ss_pred CCEE-EEECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHHHH
Confidence 3444 444556777777889999999888877777776777788999999999976544433
No 379
>PRK14665 mnmA tRNA-specific 2-thiouridylase MnmA; Provisional
Probab=21.29 E-value=2.9e+02 Score=26.49 Aligned_cols=58 Identities=9% Similarity=0.055 Sum_probs=42.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC-----CH---HHHHHHhhhcCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL-----DA---HNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-----~~---~~l~~~l~~~~~~~ii~~ 118 (485)
++++++|++.+.-+.|+.++++-+.+.|.-++.+.-+. +. +....+.+..+..+.+.+
T Consensus 2 ~~~~~kVlValSGGVDSsvaa~LL~~~G~~V~~v~~~~~~~~~~~~d~~~a~~va~~LgIp~~vvd 67 (360)
T PRK14665 2 MEKNKRVLLGMSGGTDSSVAAMLLLEAGYEVTGVTFRFYEFNGSTEYLEDARALAERLGIGHITYD 67 (360)
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHcCCeEEEEEEecCCCCCChHHHHHHHHHHHHhCCCEEEEe
Confidence 57899999999999999999999988887655543221 22 224566677777777665
No 380
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=21.27 E-value=1.1e+02 Score=29.57 Aligned_cols=58 Identities=14% Similarity=0.097 Sum_probs=28.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHH--hhhccCc--eEEecCC-----CCCHHHHHHHhhhcCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQF--GVPMSGA--ILNNINT-----RLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~l--A~~~~G~--~~v~l~~-----~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+++||.|.+.-+...-.+.... ++...|+ ..++++. ....+.+...+...+++++++.
T Consensus 102 ~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~ 168 (402)
T cd00378 102 LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG 168 (402)
T ss_pred cCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence 3577777666554322211111 1333454 2343332 2356667666665567777663
No 381
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=21.12 E-value=1.8e+02 Score=26.59 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCce
Q 036361 48 RCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAI 90 (485)
Q Consensus 48 ~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~ 90 (485)
....+...|.+.|+.+++.|.++|..... ...+.+.+...|..
T Consensus 71 ~~~~~~~~~~~~Gi~~d~~VVvyc~~~~~~a~~~~~~l~~~G~~ 114 (281)
T PRK11493 71 RPETFAVAMRELGVNQDKHLVVYDEGNLFSAPRAWWMLRTFGVE 114 (281)
T ss_pred CHHHHHHHHHHcCCCCCCEEEEECCCCCchHHHHHHHHHHhcCC
Confidence 35678888999999999999999987543 33445666777855
No 382
>TIGR01747 diampropi_NH3ly diaminopropionate ammonia-lyase family. This small subfamily includes diaminopropionate ammonia-lyase from Salmonella typhimurium and a small number of close homologs, about 50 % identical in sequence. The enzyme is a pyridoxal phosphate-binding homodimer homologous to threonine dehydratase (threonine deaminase).
Probab=21.09 E-value=7.6e+02 Score=23.85 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=64.7
Q ss_pred HHHhhcC-CCcEEEeCCee---eeHHHHHHHHHHHHHHHHHc----------------CCC--CCCEEEEEcCCchhHHH
Q 036361 22 RAATAYS-DCPSIVYNNTT---YTWSETHRRCLQVASSLSSV----------------GIQ--RGHVVSVVAPNVPSMYE 79 (485)
Q Consensus 22 ~~a~~~p-~~~a~~~~~~~---~Ty~~l~~~~~~lA~~L~~~----------------gi~--~gd~V~l~~~~~~~~~~ 79 (485)
.-++..+ .++.+.....+ -||+..- .+..+++.+.+. .++ .|.+..+....+-.-..
T Consensus 30 ~l~~~~g~~~v~~K~E~~~~~tgSFK~RG-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~aSsGN~g~a 108 (376)
T TIGR01747 30 HLANLLGLKKILVKDESKRFGLNAFKMLG-GSYAIAQYLAEKLHLDIETLSFEHLKNDAIGEKMGQATFATATDGNHGRG 108 (376)
T ss_pred HHHHHhCCCcEEEeeCCCCCCCCChHHHH-HHHHHHHHHHHHhCCCcccCCHHHHhhhHHHhhcCCCEEEEECccHHHHH
Confidence 3344444 46777666543 3665543 333355554431 111 13445566677777888
Q ss_pred HHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 80 LQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
+.++|...|..++.+-|...+......++..++++++++....+
T Consensus 109 ~A~~Aa~~G~~~~I~vP~~~~~~k~~~i~~~GAeVi~v~~~~~~ 152 (376)
T TIGR01747 109 VAWAAQQLGQKAVVYMPKGSAQERVENILNLGAECTITDMNYDD 152 (376)
T ss_pred HHHHHHHcCCCEEEEECCCCCHHHHHHHHhCCCEEEEECCCHHH
Confidence 88899999988777766666667777888999999999865443
No 383
>PRK06234 methionine gamma-lyase; Provisional
Probab=21.04 E-value=4.9e+02 Score=25.31 Aligned_cols=13 Identities=15% Similarity=0.164 Sum_probs=7.1
Q ss_pred cEEeccHHHHHHH
Q 036361 205 GVVHSHRGIFILT 217 (485)
Q Consensus 205 ~v~~s~~~~~~~~ 217 (485)
|++...+.+....
T Consensus 223 G~v~~~~~~~~~l 235 (400)
T PRK06234 223 GFVVGKEEFINQV 235 (400)
T ss_pred EEEEecHHHHHHH
Confidence 5666655554443
No 384
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=21.00 E-value=3.6e+02 Score=26.73 Aligned_cols=68 Identities=21% Similarity=0.291 Sum_probs=44.7
Q ss_pred eeeeHHHHHHHHHHH--------------H-HHHHHcCCCCCCEEEEEcCCchhHHHHHHh-hhccCceEEec--C----
Q 036361 38 TTYTWSETHRRCLQV--------------A-SSLSSVGIQRGHVVSVVAPNVPSMYELQFG-VPMSGAILNNI--N---- 95 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~l--------------A-~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA-~~~~G~~~v~l--~---- 95 (485)
.+-||.+|.+++..+ | +.|...+++|||.| + +..++.+.-| +...|++++-+ +
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV----p-sn~~f~Tt~ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV----P-GNMYFTTTRYHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE----C-CceeHHHHHHHHHhCCeEEEeeecccccc
Confidence 455888888875543 3 23445689999976 3 3555556665 67888877666 2
Q ss_pred --------CCCCHHHHHHHhhhc
Q 036361 96 --------TRLDAHNLSVLLQHS 110 (485)
Q Consensus 96 --------~~~~~~~l~~~l~~~ 110 (485)
-+.+.+.+...++..
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccc
Confidence 124688888888754
No 385
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=20.78 E-value=7e+02 Score=25.20 Aligned_cols=80 Identities=11% Similarity=0.008 Sum_probs=53.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCC-CEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCC---CHHHHHHHhhhcC
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRG-HVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRL---DAHNLSVLLQHSE 111 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~g-d~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~ 111 (485)
..+|++.+...+..+. ...++.++ |++...+|-. ..++..+++.+..|+..+.+.+.. .+.....++++.+
T Consensus 170 v~~s~~~~~~~~~~~~---~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~ 246 (545)
T PRK07768 170 VQITHGNLYANAEAMF---VAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYR 246 (545)
T ss_pred EEEcHHHHHHHHHHHH---HhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhC
Confidence 4689998876554443 33577776 7777776654 344445666788898888775532 4566778899999
Q ss_pred CcEEEEcCc
Q 036361 112 SKLVFVDHL 120 (485)
Q Consensus 112 ~~~ii~~~~ 120 (485)
+..+.+...
T Consensus 247 ~~~~~~~~~ 255 (545)
T PRK07768 247 GTMTAAPNF 255 (545)
T ss_pred CEEEECchH
Confidence 998765443
No 386
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=20.51 E-value=3.4e+02 Score=19.60 Aligned_cols=69 Identities=13% Similarity=0.107 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCEEEEE-cCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 46 HRRCLQVASSLSSVGIQRGHVVSVV-APNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 46 ~~~~~~lA~~L~~~gi~~gd~V~l~-~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
++-+..++..+...+ .-+.|.|. ..+-++.+.+.--+.+.+++.++.+ +.-++.....|+..+++-+++
T Consensus 9 yeTs~~va~~~~~~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~~v~i 78 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIKKVYI 78 (92)
T ss_pred HHHHHHHHHHhcccC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCCEEEE
Confidence 344555666654422 34445554 4444555554444455677877777 444466666666664444433
No 387
>cd01526 RHOD_ThiF Member of the Rhodanese Homology Domain superfamily. This CD includes several putative molybdopterin synthase sulfurylases including the molybdenum cofactor biosynthetic protein (CnxF) of Aspergillus nidulans and the molybdenum cofactor synthesis protein 3 (MOCS3) of Homo sapiens. These rhodanese-like domains are found C-terminal of the ThiF and MoeZ_MoeB domains.
Probab=20.45 E-value=4e+02 Score=20.43 Aligned_cols=52 Identities=12% Similarity=-0.004 Sum_probs=37.0
Q ss_pred eeeeHHHHHHHHHHHHHH-HHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 38 TTYTWSETHRRCLQVASS-LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~-L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
..+.+.++......+... +...++.++..|.++|..+.....+...+...|.
T Consensus 45 i~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~C~~G~rs~~aa~~L~~~G~ 97 (122)
T cd01526 45 INIPLSELLSKAAELKSLQELPLDNDKDSPIYVVCRRGNDSQTAVRKLKELGL 97 (122)
T ss_pred eEccHHHHhhhhhhhhhhhhcccccCCCCcEEEECCCCCcHHHHHHHHHHcCC
Confidence 467788776655444332 2235677888999999988877777777888887
No 388
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=20.39 E-value=3.4e+02 Score=21.15 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=26.6
Q ss_pred cCCCCCCEEEEEcC-CchhHHHHHHhhhccCceEEecC
Q 036361 59 VGIQRGHVVSVVAP-NVPSMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 59 ~gi~~gd~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~ 95 (485)
.|+.+.+.|.++|. .+.....+.+.+...|..+..|+
T Consensus 81 ~~i~~~~~vvvyC~~~G~rs~~a~~~L~~~G~~v~~L~ 118 (128)
T cd01520 81 ARLERDPKLLIYCARGGMRSQSLAWLLESLGIDVPLLE 118 (128)
T ss_pred hccCCCCeEEEEeCCCCccHHHHHHHHHHcCCceeEeC
Confidence 58999999999996 45666666666677787644443
No 389
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=20.39 E-value=5.2e+02 Score=23.36 Aligned_cols=60 Identities=15% Similarity=0.144 Sum_probs=38.9
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce-EEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI-LNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~-~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
.+.+.+..+|++|.|+..-..-...+++|- ..|+. ++.++. ++++ ..++++.+++.++..
T Consensus 112 al~~~~~~~g~~VlV~G~G~vG~~~~~~ak-~~G~~~Vi~~~~--~~~r-~~~a~~~Ga~~~i~~ 172 (280)
T TIGR03366 112 ALEAAGDLKGRRVLVVGAGMLGLTAAAAAA-AAGAARVVAADP--SPDR-RELALSFGATALAEP 172 (280)
T ss_pred HHHhccCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHH-HHHHHHcCCcEecCc
Confidence 355567779999999977666666666664 45875 554532 3333 345667788777654
No 390
>TIGR01279 DPOR_bchN light-independent protochlorophyllide reductase, N subunit. This enzyme describes the N subunit of the dark form protochlorophyllide reductase, a nitrogenase-like enzyme involved in bacteriochlorophyll biosynthesis. This subunit shows homology to the nitrogenase molybdenum-iron protein NifN.
Probab=20.38 E-value=7.2e+02 Score=24.26 Aligned_cols=90 Identities=14% Similarity=0.102 Sum_probs=0.0
Q ss_pred hhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecC
Q 036361 16 TLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 16 l~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~ 95 (485)
+.+.+....+....+.++++.+. ..+..++++|.++|..+ ..+.....+.++..-.+..+.-+ +.+-
T Consensus 261 ~~~~l~~~~~~l~Gkrv~i~gd~--------~~~~~l~~~L~elGm~~--v~~~t~~~~~~~~~~~~~~l~~~---~~v~ 327 (407)
T TIGR01279 261 AWRALEPHTQLLRGKKIFFFGDN--------LLELPLARFLKRCGMEV--VECGTPYIHRRFHAAELALLEGG---VRIV 327 (407)
T ss_pred HHHHHHHHHHhcCCCEEEEECCc--------hHHHHHHHHHHHCCCEE--EEecCCCCChHHHHHHHhhcCCC---CeEE
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEc
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
......++...+++.+++++|..
T Consensus 328 ~~~d~~~l~~~i~~~~pDllig~ 350 (407)
T TIGR01279 328 EQPDFHRQLQRIRATRPDLVVTG 350 (407)
T ss_pred eCCCHHHHHHHHHhcCCCEEecC
No 391
>PF13580 SIS_2: SIS domain; PDB: 1TK9_C 2I22_B 2I2W_A 1X92_A 3BJZ_D 2XBL_B 2X3Y_F 2YVA_B 3CVJ_D 3TRJ_D ....
Probab=20.23 E-value=2.9e+02 Score=22.00 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=35.2
Q ss_pred eHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCC--chhHHHHHHhhhccCceEEec
Q 036361 41 TWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPN--VPSMYELQFGVPMSGAILNNI 94 (485)
Q Consensus 41 Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~--~~~~~~~~lA~~~~G~~~v~l 94 (485)
+...-.+.-..+++.+.+ ..++|||.+.++... ++..+-++..+-+.|+..+-|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~gDvli~iS~SG~s~~vi~a~~~Ak~~G~~vIal 136 (138)
T PF13580_consen 80 AISNDLEYDEGFARQLLALYDIRPGDVLIVISNSGNSPNVIEAAEEAKERGMKVIAL 136 (138)
T ss_dssp HHHHHTTGGGTHHHHHHHHTT--TT-EEEEEESSS-SHHHHHHHHHHHHTT-EEEEE
T ss_pred hhhcccchhhHHHHHHHHHcCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEE
Confidence 344444555667777766 578999999888654 577777888888889887755
No 392
>PRK09224 threonine dehydratase; Reviewed
Probab=20.19 E-value=6.3e+02 Score=25.59 Aligned_cols=94 Identities=6% Similarity=-0.016 Sum_probs=59.6
Q ss_pred hcCCCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHH
Q 036361 26 AYSDCPSIVYNNT--TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNL 103 (485)
Q Consensus 26 ~~p~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l 103 (485)
.....+.+-..+. +-||+. +...+.++....+.+ ++| .+.+..+-......++|.++|..++.+=|...+...
T Consensus 32 ~~g~~i~lK~E~lqptgSfK~-RgA~n~i~~l~~~~~-~~g---vV~aSaGNha~avA~aa~~lGi~~~IvmP~~tp~~K 106 (504)
T PRK09224 32 RLGNQVLLKREDLQPVFSFKL-RGAYNKMAQLTEEQL-ARG---VITASAGNHAQGVALSAARLGIKAVIVMPVTTPDIK 106 (504)
T ss_pred HhCCEEEEEecCCCCCCCChH-HHHHHHHHhhhHHhc-CCE---EEEECcCHHHHHHHHHHHHcCCCEEEEECCCCCHHH
Confidence 3344566665553 335544 333444444322222 222 344567778888888999999887777777666666
Q ss_pred HHHhhhcCCcEEEEcCcchHH
Q 036361 104 SVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 104 ~~~l~~~~~~~ii~~~~~~~~ 124 (485)
...++..++++++++....+.
T Consensus 107 ~~~~r~~GA~Vi~~g~~~~~a 127 (504)
T PRK09224 107 VDAVRAFGGEVVLHGDSFDEA 127 (504)
T ss_pred HHHHHhCCCEEEEECCCHHHH
Confidence 778999999999998654433
No 393
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=20.16 E-value=4.1e+02 Score=25.62 Aligned_cols=55 Identities=7% Similarity=0.112 Sum_probs=30.1
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC--C----CCHHHHHHHhhhc------CCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--R----LDAHNLSVLLQHS------ESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~----~~~~~l~~~l~~~------~~~~ii~~ 118 (485)
+++||.|.+.-+.+.- ...++...|+.++.++. + .+.+.+...++.. ++++|++.
T Consensus 99 ~~~gd~Vlv~~~~h~s---~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~ 165 (387)
T PRK09331 99 CKKGDYVVLDGLAHYT---SYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLT 165 (387)
T ss_pred cCCCCEEEECCCchHH---HHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEE
Confidence 3677776654332222 22345566777666654 1 3466666666542 56666654
No 394
>TIGR03772 anch_rpt_subst anchored repeat ABC transporter, substrate-binding protein. Members of this protein family are ABC transporter permease subunits as identified by pfam00950, but additionally contain the Actinobacterial insert domain described by TIGR03769. Some homologs (lacking the insert) have been described as transporters of manganese or of chelated iron. Members of this family typically are found along with an ATP-binding cassette protein, a permease, and an LPXTG-anchored protein with two or three copies of the TIGR03769 insert that occurs just once in this protein family.
Probab=20.09 E-value=6e+02 Score=25.54 Aligned_cols=79 Identities=13% Similarity=0.184 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCC--CH---HHHHHHhhhcCCcEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRL--DA---HNLSVLLQHSESKLV 115 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~--~~---~~l~~~l~~~~~~~i 115 (485)
+++.++..++-..+++. .++...+..+...+...++.--|++-..|.. -+++.. ++ .++...+++.++++|
T Consensus 347 ~ay~~eL~~Ld~~~~~~la~ip~k~r~vvt~H~af~YLa~~YGL~~~~~~--~~~~~~ePS~~~L~~Li~~IK~~~V~~I 424 (479)
T TIGR03772 347 SAYIHRLERLDTYVRRTIATIPPSRRHLITTHDAYSYLGQAYGLNIAGFV--TPNPAVEPSLADRRRLTRTIENLKVPAV 424 (479)
T ss_pred HHHHHHHHHHHHHHHHHhhhccccCCEEEEECCcHHHHHHHCCCeEEeee--ccCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 33444444444444442 2323346777788899999999998887733 244333 33 345677788899999
Q ss_pred EEcCcchH
Q 036361 116 FVDHLHSS 123 (485)
Q Consensus 116 i~~~~~~~ 123 (485)
|+++....
T Consensus 425 F~Epq~~~ 432 (479)
T TIGR03772 425 FLEPNLAA 432 (479)
T ss_pred EEeCCCCC
Confidence 99987653
No 395
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=20.03 E-value=6.7e+02 Score=22.82 Aligned_cols=65 Identities=9% Similarity=-0.045 Sum_probs=45.3
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHhhhccCceEE--ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 60 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN--NINTRLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
.-=+|-+|+.++.=.++..+.+..+...||-+. .-||..+.+.....|...+..+.--..+..+.
T Consensus 39 kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~get~ee 105 (268)
T PF05221_consen 39 KPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGETDEE 105 (268)
T ss_dssp -TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT--HHH
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCCCHHH
Confidence 334688999999999999999999999999765 45778889999999988877554443333333
Done!