Query 036361
Match_columns 485
No_of_seqs 175 out of 2220
Neff 10.7
Searched_HMMs 29240
Date Mon Mar 25 20:32:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036361.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036361hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v25_A Long-chain-fatty-acid-C 100.0 1.3E-74 4.4E-79 583.0 42.8 457 6-484 10-475 (541)
2 3ni2_A 4-coumarate:COA ligase; 100.0 5E-74 1.7E-78 578.5 39.5 443 13-484 21-474 (536)
3 3g7s_A Long-chain-fatty-acid-- 100.0 1.4E-73 4.9E-78 576.8 42.6 442 9-484 14-479 (549)
4 1mdb_A 2,3-dihydroxybenzoate-A 100.0 3.7E-73 1.3E-77 572.1 43.3 439 11-484 22-470 (539)
5 3o83_A Peptide arylation enzym 100.0 1.5E-73 5.1E-78 575.7 38.3 443 11-485 27-480 (544)
6 3rix_A Luciferase, luciferin 4 100.0 1.2E-73 4.1E-78 577.4 37.2 447 9-484 15-479 (550)
7 3r44_A Fatty acyl COA syntheta 100.0 1.6E-72 5.6E-77 564.6 38.2 442 6-484 8-453 (517)
8 4fuq_A Malonyl COA synthetase; 100.0 5.3E-72 1.8E-76 559.0 40.6 430 17-484 3-439 (503)
9 3ivr_A Putative long-chain-fat 100.0 3.2E-72 1.1E-76 562.4 38.9 434 11-484 3-440 (509)
10 3etc_A AMP-binding protein; ad 100.0 2.5E-71 8.4E-76 562.1 44.1 440 14-484 55-515 (580)
11 2d1s_A Luciferase, luciferin 4 100.0 1.8E-71 6.2E-76 560.6 42.5 440 14-484 25-481 (548)
12 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.6E-70 5.3E-75 549.1 41.6 425 14-484 2-442 (504)
13 1amu_A GRSA, gramicidin synthe 100.0 2.5E-70 8.5E-75 553.3 41.8 424 13-484 38-470 (563)
14 4dg8_A PA1221; ANL superfamily 100.0 5.1E-71 1.7E-75 562.7 36.3 422 12-483 25-458 (620)
15 3rg2_A Enterobactin synthase c 100.0 5E-70 1.7E-74 557.9 42.9 439 11-484 24-474 (617)
16 4gr5_A Non-ribosomal peptide s 100.0 3.8E-71 1.3E-75 561.2 34.3 426 11-484 72-509 (570)
17 3c5e_A Acyl-coenzyme A synthet 100.0 1.3E-69 4.5E-74 548.8 43.6 435 15-484 39-496 (570)
18 3fce_A D-alanine--poly(phospho 100.0 2.4E-70 8.1E-75 549.2 37.6 428 14-484 1-439 (512)
19 1ry2_A Acetyl-coenzyme A synth 100.0 1.4E-69 4.7E-74 556.9 42.6 450 15-485 83-567 (663)
20 1pg4_A Acetyl-COA synthetase; 100.0 8.1E-70 2.8E-74 558.5 40.2 448 15-484 77-557 (652)
21 3ipl_A 2-succinylbenzoate--COA 100.0 3.4E-70 1.2E-74 546.8 35.4 438 14-484 1-438 (501)
22 3e7w_A D-alanine--poly(phospho 100.0 9.7E-70 3.3E-74 544.3 37.3 427 14-484 1-438 (511)
23 3tsy_A Fusion protein 4-coumar 100.0 1E-69 3.5E-74 583.5 37.2 450 12-484 59-521 (979)
24 3l8c_A D-alanine--poly(phospho 100.0 2.5E-69 8.4E-74 543.3 36.9 428 12-482 2-441 (521)
25 2v7b_A Benzoate-coenzyme A lig 100.0 7E-69 2.4E-73 540.7 38.8 436 15-483 25-467 (529)
26 3gqw_A Fatty acid AMP ligase; 100.0 2E-66 6.8E-71 529.4 38.5 436 11-481 18-498 (576)
27 3nyq_A Malonyl-COA ligase; A/B 100.0 8.6E-68 2.9E-72 528.4 27.2 414 13-484 21-446 (505)
28 3kxw_A Saframycin MX1 syntheta 100.0 1.7E-67 5.7E-72 538.5 29.4 439 11-481 8-498 (590)
29 3ite_A SIDN siderophore synthe 100.0 9.2E-67 3.2E-71 529.1 33.3 430 10-484 16-468 (562)
30 2vsq_A Surfactin synthetase su 100.0 1.5E-65 5E-70 564.3 35.2 429 12-484 462-901 (1304)
31 3t5a_A Long-chain-fatty-acid-- 100.0 2.8E-62 9.7E-67 487.6 31.4 402 8-442 18-480 (480)
32 4gs5_A Acyl-COA synthetase (AM 100.0 3.3E-44 1.1E-48 341.2 16.9 253 187-484 36-294 (358)
33 3qov_A Phenylacetate-coenzyme 100.0 1.1E-42 3.7E-47 341.4 19.3 267 188-483 86-370 (436)
34 2y27_A Phenylacetate-coenzyme 100.0 9.1E-42 3.1E-46 334.9 19.4 269 185-483 87-372 (437)
35 2y4o_A Phenylacetate-coenzyme 100.0 1.2E-41 4.2E-46 334.7 19.5 269 185-483 89-374 (443)
36 3hgu_A EHPF; phenazine, antibi 100.0 7.8E-31 2.7E-35 251.3 14.4 234 185-452 88-368 (369)
37 4eql_A 4-substituted benzoates 98.8 5.1E-08 1.7E-12 95.9 12.9 63 385-466 381-447 (581)
38 4b2g_A GH3-1 auxin conjugating 98.7 6E-08 2E-12 95.5 9.9 63 384-465 392-458 (609)
39 4epl_A Jasmonic acid-amido syn 98.5 6.1E-07 2.1E-11 88.0 12.5 63 384-465 387-453 (581)
40 3lax_A Phenylacetate-coenzyme 98.5 4.8E-08 1.6E-12 74.7 2.9 44 441-484 1-44 (109)
41 3gxs_A Phenylacetate-coenzyme 98.4 1.1E-07 3.9E-12 72.5 3.0 44 441-484 1-44 (109)
42 2y27_A Phenylacetate-coenzyme 94.4 0.46 1.6E-05 45.5 12.9 91 38-129 108-200 (437)
43 3qov_A Phenylacetate-coenzyme 94.3 0.44 1.5E-05 45.7 12.5 92 38-130 104-197 (436)
44 2y4o_A Phenylacetate-coenzyme 94.2 0.5 1.7E-05 45.3 12.7 91 38-129 110-202 (443)
45 1mdb_A 2,3-dihydroxybenzoate-A 85.8 12 0.00041 36.6 13.9 99 27-129 180-290 (539)
46 3ipl_A 2-succinylbenzoate--COA 84.7 13 0.00043 36.0 13.3 99 27-129 161-269 (501)
47 4gs5_A Acyl-COA synthetase (AM 83.2 4.2 0.00014 37.5 8.7 95 27-127 35-139 (358)
48 2d1s_A Luciferase, luciferin 4 81.8 7.1 0.00024 38.4 10.2 97 29-127 192-299 (548)
49 3o83_A Peptide arylation enzym 81.3 8.5 0.00029 37.8 10.6 97 28-128 190-298 (544)
50 3g7s_A Long-chain-fatty-acid-- 80.9 16 0.00054 35.9 12.4 103 186-290 32-138 (549)
51 3r44_A Fatty acyl COA syntheta 79.7 12 0.0004 36.6 10.9 85 38-127 188-274 (517)
52 3rix_A Luciferase, luciferin 4 79.1 7.4 0.00025 38.3 9.3 98 188-290 35-136 (550)
53 3hgu_A EHPF; phenazine, antibi 79.0 3.4 0.00012 38.3 6.5 86 38-125 109-219 (369)
54 3ni2_A 4-coumarate:COA ligase; 78.9 13 0.00045 36.4 11.0 96 186-289 35-134 (536)
55 3ivr_A Putative long-chain-fat 77.8 16 0.00056 35.4 11.3 94 186-289 19-116 (509)
56 1v25_A Long-chain-fatty-acid-C 77.3 22 0.00075 34.8 12.1 98 187-290 32-133 (541)
57 3rg2_A Enterobactin synthase c 76.4 41 0.0014 33.5 14.0 98 28-129 183-292 (617)
58 3fce_A D-alanine--poly(phospho 75.5 9 0.00031 37.2 8.7 85 38-125 162-249 (512)
59 1t5h_X 4-chlorobenzoyl COA lig 74.9 27 0.00093 33.7 12.0 97 186-290 15-117 (504)
60 3e7w_A D-alanine--poly(phospho 74.8 16 0.00055 35.4 10.3 86 38-126 161-249 (511)
61 3c5e_A Acyl-coenzyme A synthet 73.8 31 0.0011 34.0 12.2 100 186-290 56-160 (570)
62 3kxw_A Saframycin MX1 syntheta 73.3 23 0.00078 35.1 11.2 99 27-128 165-277 (590)
63 1amu_A GRSA, gramicidin synthe 72.4 31 0.0011 34.0 11.8 95 186-290 52-150 (563)
64 3t5a_A Long-chain-fatty-acid-- 72.2 26 0.00087 33.5 11.0 104 186-291 37-147 (480)
65 3etc_A AMP-binding protein; ad 71.4 27 0.00092 34.5 11.1 94 186-284 69-166 (580)
66 4fuq_A Malonyl COA synthetase; 70.4 31 0.0011 33.3 11.2 79 207-286 28-110 (503)
67 3tbh_A O-acetyl serine sulfhyd 69.6 15 0.00052 33.4 8.1 65 56-120 62-127 (334)
68 2v7b_A Benzoate-coenzyme A lig 67.8 23 0.0008 34.4 9.7 81 207-288 48-132 (529)
69 1pg4_A Acetyl-COA synthetase; 67.6 42 0.0014 33.7 11.7 94 187-284 90-187 (652)
70 4gr5_A Non-ribosomal peptide s 65.8 43 0.0015 32.9 11.2 92 186-287 88-183 (570)
71 1ry2_A Acetyl-coenzyme A synth 64.9 44 0.0015 33.7 11.2 96 186-285 95-195 (663)
72 3vc3_A Beta-cyanoalnine syntha 63.9 23 0.0008 32.3 8.2 91 29-120 50-142 (344)
73 3tsy_A Fusion protein 4-coumar 61.8 24 0.00081 37.6 9.0 94 186-287 74-171 (979)
74 4dg8_A PA1221; ANL superfamily 58.2 47 0.0016 33.1 10.0 113 28-146 163-286 (620)
75 3l8c_A D-alanine--poly(phospho 57.4 58 0.002 31.5 10.3 78 206-284 28-109 (521)
76 3nyq_A Malonyl-COA ligase; A/B 56.9 61 0.0021 31.2 10.4 96 27-127 153-259 (505)
77 3gqw_A Fatty acid AMP ligase; 49.6 81 0.0028 30.8 10.1 84 206-290 48-142 (576)
78 4aec_A Cysteine synthase, mito 46.0 65 0.0022 30.3 8.1 63 57-119 166-229 (430)
79 2q3b_A Cysteine synthase A; py 45.7 75 0.0026 28.3 8.3 64 56-120 58-122 (313)
80 4eez_A Alcohol dehydrogenase 1 44.6 63 0.0022 29.2 7.8 78 39-119 136-216 (348)
81 1ve1_A O-acetylserine sulfhydr 44.2 1.3E+02 0.0045 26.5 9.7 63 57-120 52-117 (304)
82 3ju7_A Putative PLP-dependent 42.9 50 0.0017 30.4 6.9 60 56-118 70-136 (377)
83 2egu_A Cysteine synthase; O-ac 42.8 86 0.0029 27.8 8.2 63 57-120 57-120 (308)
84 3ite_A SIDN siderophore synthe 42.2 55 0.0019 32.0 7.4 86 38-123 193-284 (562)
85 1toa_A Tromp-1, protein (perip 41.8 82 0.0028 28.2 7.8 87 43-129 173-264 (313)
86 4h1h_A LMO1638 protein; MCCF-l 40.5 77 0.0026 28.6 7.5 59 60-118 8-85 (327)
87 3ezx_A MMCP 1, monomethylamine 40.2 52 0.0018 27.6 5.9 94 227-320 91-195 (215)
88 3mfq_A TROA, high-affinity zin 39.9 79 0.0027 27.7 7.3 87 42-128 138-229 (282)
89 2pqm_A Cysteine synthase; OASS 39.7 92 0.0032 28.2 8.0 62 58-120 71-133 (343)
90 3ujp_A Mn transporter subunit; 38.9 89 0.003 27.8 7.5 86 42-129 165-257 (307)
91 2v03_A Cysteine synthase B; py 38.6 1.3E+02 0.0043 26.6 8.6 61 58-119 54-115 (303)
92 3b8x_A WBDK, pyridoxamine 5-ph 38.5 1.3E+02 0.0045 27.4 9.1 55 60-118 76-135 (390)
93 1z7w_A Cysteine synthase; tran 38.4 1.1E+02 0.0038 27.3 8.3 64 57-120 58-122 (322)
94 2jtq_A Phage shock protein E; 38.3 59 0.002 22.0 5.1 46 38-90 22-67 (85)
95 3l6b_A Serine racemase; pyrido 38.0 51 0.0018 30.0 6.0 59 63-122 75-133 (346)
96 3sr3_A Microcin immunity prote 37.7 91 0.0031 28.2 7.5 60 60-119 9-87 (336)
97 1eg5_A Aminotransferase; PLP-d 37.6 1.1E+02 0.0039 27.6 8.5 7 205-211 211-217 (384)
98 1xvl_A Mn transporter, MNTC pr 37.2 94 0.0032 27.9 7.5 86 42-129 179-271 (321)
99 3hh8_A Metal ABC transporter s 37.0 66 0.0023 28.5 6.3 84 42-127 158-248 (294)
100 1o69_A Aminotransferase; struc 37.0 1.2E+02 0.0042 27.7 8.7 58 59-119 67-130 (394)
101 3ri6_A O-acetylhomoserine sulf 36.4 1.2E+02 0.0041 28.5 8.5 61 68-128 100-163 (430)
102 3tla_A MCCF; serine protease, 36.1 98 0.0033 28.5 7.4 61 59-119 38-117 (371)
103 3pc3_A CG1753, isoform A; CBS, 35.4 1.1E+02 0.0037 29.8 8.1 61 58-119 106-167 (527)
104 2cvh_A DNA repair and recombin 34.8 1.1E+02 0.0037 25.0 7.3 52 60-112 16-71 (220)
105 3two_A Mannitol dehydrogenase; 34.4 1.1E+02 0.0038 27.6 7.7 59 54-116 167-225 (348)
106 3euc_A Histidinol-phosphate am 34.3 1.6E+02 0.0054 26.5 8.9 55 61-118 106-164 (367)
107 4e5s_A MCCFLIKE protein (BA_56 34.1 1E+02 0.0035 27.8 7.2 59 60-118 8-85 (331)
108 3dwg_A Cysteine synthase B; su 33.8 1.4E+02 0.0046 26.8 8.0 63 57-120 65-128 (325)
109 1mdo_A ARNB aminotransferase; 33.0 1E+02 0.0035 28.1 7.4 15 204-218 195-210 (393)
110 3dzz_A Putative pyridoxal 5'-p 32.9 1.2E+02 0.0039 27.7 7.7 55 61-118 106-167 (391)
111 1y80_A Predicted cobalamin bin 32.8 1.7E+02 0.0057 24.1 8.0 83 38-120 55-148 (210)
112 3tqh_A Quinone oxidoreductase; 32.6 1.1E+02 0.0038 27.2 7.3 76 39-119 125-204 (321)
113 4dq6_A Putative pyridoxal phos 32.6 1.2E+02 0.0042 27.5 7.8 51 62-117 112-170 (391)
114 2prs_A High-affinity zinc upta 32.3 1E+02 0.0035 27.0 6.8 85 43-129 152-241 (284)
115 1vjk_A Molybdopterin convertin 32.3 88 0.003 22.1 5.3 45 13-72 36-94 (98)
116 3s2e_A Zinc-containing alcohol 31.9 1.4E+02 0.005 26.6 8.0 77 39-119 139-218 (340)
117 2o1e_A YCDH; alpha-beta protei 31.5 1.1E+02 0.0037 27.3 6.9 85 43-129 168-257 (312)
118 1h2b_A Alcohol dehydrogenase; 31.2 1.5E+02 0.0053 26.8 8.1 63 55-120 176-240 (359)
119 3ist_A Glutamate racemase; str 31.2 2.1E+02 0.0072 24.8 8.5 57 18-78 19-81 (269)
120 1zsy_A Mitochondrial 2-enoyl t 31.2 1.4E+02 0.0049 26.9 7.9 79 39-118 139-223 (357)
121 3ijw_A Aminoglycoside N3-acety 30.3 36 0.0012 29.6 3.3 23 50-72 18-40 (268)
122 1y7l_A O-acetylserine sulfhydr 29.9 2.3E+02 0.0078 25.1 8.9 90 28-120 25-117 (316)
123 1o58_A O-acetylserine sulfhydr 29.9 2.1E+02 0.0073 25.1 8.6 51 70-120 70-120 (303)
124 2e7j_A SEP-tRNA:Cys-tRNA synth 29.8 1.9E+02 0.0064 25.9 8.6 44 62-108 91-140 (371)
125 4h27_A L-serine dehydratase/L- 29.6 94 0.0032 28.5 6.3 60 64-123 92-151 (364)
126 3op7_A Aminotransferase class 29.6 1.3E+02 0.0045 27.2 7.4 54 61-118 102-161 (375)
127 4eb5_A Probable cysteine desul 29.5 1E+02 0.0035 27.8 6.7 33 86-118 86-119 (382)
128 3jv7_A ADH-A; dehydrogenase, n 29.3 1.9E+02 0.0065 25.9 8.4 78 40-120 143-225 (345)
129 3ndn_A O-succinylhomoserine su 28.5 2.3E+02 0.0078 26.3 8.9 60 69-128 100-162 (414)
130 3sma_A FRBF; N-acetyl transfer 28.2 41 0.0014 29.5 3.3 28 38-72 20-47 (286)
131 3isl_A Purine catabolism prote 28.2 1.7E+02 0.0059 26.7 8.1 69 49-119 72-144 (416)
132 2nyg_A YOKD protein; PFAM02522 28.1 41 0.0014 29.4 3.3 22 51-72 17-38 (273)
133 3fpc_A NADP-dependent alcohol 28.0 1.3E+02 0.0045 27.1 7.1 60 55-118 158-218 (352)
134 3a2b_A Serine palmitoyltransfe 27.5 2.6E+02 0.0089 25.4 9.2 55 61-119 124-181 (398)
135 4d9i_A Diaminopropionate ammon 27.3 2.9E+02 0.0098 25.5 9.3 58 67-124 114-171 (398)
136 2cf5_A Atccad5, CAD, cinnamyl 27.3 1.4E+02 0.0048 27.1 7.1 62 55-119 171-233 (357)
137 2cb1_A O-acetyl homoserine sul 26.8 2.2E+02 0.0075 26.2 8.5 12 62-73 93-104 (412)
138 3gi1_A LBP, laminin-binding pr 26.0 1.5E+02 0.0052 25.9 6.8 84 42-129 156-246 (286)
139 4hvk_A Probable cysteine desul 25.8 1.1E+02 0.0038 27.5 6.2 12 107-118 108-119 (382)
140 4ej6_A Putative zinc-binding d 25.4 1.7E+02 0.0059 26.6 7.4 59 55-117 174-233 (370)
141 1elu_A L-cysteine/L-cystine C- 25.2 1.6E+02 0.0055 26.6 7.2 76 42-119 54-134 (390)
142 1yqd_A Sinapyl alcohol dehydro 25.1 2.2E+02 0.0076 25.8 8.0 62 55-119 178-240 (366)
143 3zrp_A Serine-pyruvate aminotr 25.0 2.1E+02 0.0072 25.7 8.0 68 49-119 64-135 (384)
144 3i16_A Aluminum resistance pro 24.9 1.8E+02 0.006 27.3 7.4 59 61-119 112-184 (427)
145 2c81_A Glutamine-2-deoxy-scyll 24.8 1.4E+02 0.0047 27.6 6.7 17 203-219 198-215 (418)
146 3ss7_X D-serine dehydratase; t 24.7 3.2E+02 0.011 25.7 9.2 60 66-125 161-220 (442)
147 1uuf_A YAHK, zinc-type alcohol 24.7 1.8E+02 0.0061 26.5 7.3 61 54-118 185-245 (369)
148 3hvy_A Cystathionine beta-lyas 24.7 2E+02 0.0069 26.9 7.7 59 61-119 113-184 (427)
149 2ch1_A 3-hydroxykynurenine tra 24.5 2.3E+02 0.0077 25.7 8.1 34 85-118 90-123 (396)
150 2q5w_D Molybdopterin convertin 24.2 1.2E+02 0.004 20.1 4.5 46 12-72 24-73 (77)
151 2rkb_A Serine dehydratase-like 24.1 1.3E+02 0.0043 26.9 6.0 56 67-122 56-111 (318)
152 1wy5_A TILS, hypothetical UPF0 24.0 3.8E+02 0.013 23.7 9.4 71 49-119 8-92 (317)
153 1wxi_A NH(3)-dependent NAD(+) 23.7 3.5E+02 0.012 23.4 8.6 77 39-118 16-110 (275)
154 2z9v_A Aspartate aminotransfer 23.6 2E+02 0.0068 26.0 7.5 13 205-217 205-217 (392)
155 2e18_A NH(3)-dependent NAD(+) 23.6 1.4E+02 0.0049 25.5 6.1 74 40-119 4-83 (257)
156 2bkw_A Alanine-glyoxylate amin 23.6 3.2E+02 0.011 24.4 9.0 56 62-118 84-144 (385)
157 3frk_A QDTB; aminotransferase, 23.0 1E+02 0.0034 28.0 5.3 58 56-117 68-130 (373)
158 1pl8_A Human sorbitol dehydrog 22.9 2.1E+02 0.0071 25.8 7.4 60 55-118 163-223 (356)
159 3cx3_A Lipoprotein; zinc-bindi 22.8 94 0.0032 27.2 4.8 83 43-129 155-244 (284)
160 1e5e_A MGL, methionine gamma-l 22.8 2.3E+02 0.0078 26.1 7.7 11 205-215 220-230 (404)
161 3nnk_A Ureidoglycine-glyoxylat 22.7 2.6E+02 0.0088 25.4 8.2 69 49-119 74-146 (411)
162 3kax_A Aminotransferase, class 22.7 2.6E+02 0.009 25.0 8.2 53 61-117 103-162 (383)
163 1b9h_A AHBA synthase, protein 22.6 1.9E+02 0.0066 26.1 7.2 45 60-107 74-123 (388)
164 2z61_A Probable aspartate amin 22.5 2.3E+02 0.0078 25.4 7.7 22 200-221 227-248 (370)
165 3po0_A Small archaeal modifier 22.4 1.9E+02 0.0065 19.7 5.5 45 13-72 27-85 (89)
166 2ayi_A Aminopeptidase T; metal 22.3 1.4E+02 0.0048 27.8 6.0 51 45-95 4-58 (408)
167 2jwk_A Protein TOLR; periplasm 22.3 1.5E+02 0.0051 19.2 4.7 32 18-49 34-65 (74)
168 3jzl_A Putative cystathionine 22.1 2.1E+02 0.007 26.6 7.2 58 61-119 98-167 (409)
169 1rjw_A ADH-HT, alcohol dehydro 22.0 2.6E+02 0.009 24.9 7.8 58 55-116 156-213 (339)
170 3aey_A Threonine synthase; PLP 21.8 1.4E+02 0.005 26.9 6.0 56 66-121 78-134 (351)
171 1pq4_A Periplasmic binding pro 21.7 1.6E+02 0.0055 25.8 6.1 84 42-129 167-255 (291)
172 1p5j_A L-serine dehydratase; l 21.6 1.4E+02 0.0049 27.3 5.9 55 67-121 95-149 (372)
173 1t3i_A Probable cysteine desul 21.5 1.9E+02 0.0065 26.4 7.0 35 85-119 115-151 (420)
174 1ofu_X SULA, hypothetical prot 21.4 2.5E+02 0.0086 20.7 6.7 50 53-102 47-98 (119)
175 1kol_A Formaldehyde dehydrogen 21.2 3.4E+02 0.012 24.8 8.6 55 56-114 178-233 (398)
176 3cog_A Cystathionine gamma-lya 21.2 3E+02 0.01 25.3 8.2 56 71-126 88-145 (403)
177 2duw_A Putative COA-binding pr 20.9 1.3E+02 0.0046 23.0 4.8 11 27-37 12-22 (145)
178 1gu7_A Enoyl-[acyl-carrier-pro 20.9 1.8E+02 0.0061 26.3 6.5 79 39-118 138-223 (364)
179 3e19_A FEOA; transcriptional r 20.8 89 0.0031 20.8 3.3 23 50-72 25-47 (77)
180 3f9t_A TDC, L-tyrosine decarbo 20.6 3.8E+02 0.013 23.9 8.9 51 63-116 122-176 (397)
181 1y81_A Conserved hypothetical 20.6 1.5E+02 0.0053 22.4 5.0 48 65-113 71-118 (138)
182 2huf_A Alanine glyoxylate amin 20.5 3E+02 0.01 24.7 8.1 13 205-217 215-227 (393)
183 1c7n_A Cystalysin; transferase 20.4 2.7E+02 0.0092 25.2 7.8 22 200-221 243-265 (399)
184 2fsx_A RV0390, COG0607: rhodan 20.4 70 0.0024 24.6 3.1 39 51-89 67-105 (148)
185 2vsq_A Surfactin synthetase su 20.2 3.1E+02 0.01 30.2 9.1 80 207-287 489-572 (1304)
186 2d1f_A Threonine synthase; ami 20.2 1.7E+02 0.0059 26.5 6.2 56 66-121 86-142 (360)
187 3d1p_A Putative thiosulfate su 20.2 1.8E+02 0.006 21.9 5.4 53 38-90 61-117 (139)
188 1urh_A 3-mercaptopyruvate sulf 20.2 1.2E+02 0.0042 26.2 5.0 40 50-89 72-112 (280)
189 4b7c_A Probable oxidoreductase 20.2 2.5E+02 0.0086 24.9 7.3 58 58-118 144-202 (336)
190 2zsj_A Threonine synthase; PLP 20.2 1.6E+02 0.0054 26.7 5.9 57 66-122 80-137 (352)
191 1e0c_A Rhodanese, sulfurtransf 20.2 1.2E+02 0.0042 26.1 5.0 39 50-88 67-106 (271)
192 2fnu_A Aminotransferase; prote 20.1 1.7E+02 0.006 26.2 6.3 14 61-74 71-84 (375)
193 1vjo_A Alanine--glyoxylate ami 20.1 3.1E+02 0.011 24.7 8.1 69 49-119 95-167 (393)
194 1uar_A Rhodanese; sulfurtransf 20.1 1.2E+02 0.0042 26.3 5.0 40 50-89 219-259 (285)
195 3kgw_A Alanine-glyoxylate amin 20.1 2.8E+02 0.0096 24.9 7.8 67 51-119 86-156 (393)
No 1
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=1.3e-74 Score=583.03 Aligned_cols=457 Identities=34% Similarity=0.514 Sum_probs=376.5
Q ss_pred CCCCCCCCcchhHHHHHHHhhcCCCcEEEe----CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Q 036361 6 PNHANSTPLTTLGFLERAATAYSDCPSIVY----NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQ 81 (485)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~----~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~ 81 (485)
+......+.++.++|+++++.+|+++|+.+ .++++||+||.++++++|++|++.|+++||+|+++++|++++++++
T Consensus 10 ~~~~~~~~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 89 (541)
T 1v25_A 10 PSTMMDEELNLWDFLERAAALFGRKEVVSRLHTGEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAY 89 (541)
T ss_dssp BCCBCCCCCCTHHHHHHHHHHSTTCEEEEECTTSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHhCCCceEEEEecCCCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHH
Confidence 344445678999999999999999999994 4579999999999999999999999999999999999999999999
Q ss_pred HhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccc
Q 036361 82 FGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVT 161 (485)
Q Consensus 82 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 161 (485)
|||+++|++++|++|.++.+++.++++.++++++|++.+..+.+.......+ ....++.+++...
T Consensus 90 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~------------ 154 (541)
T 1v25_A 90 FAVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRGELK---TVQHFVVMDEKAP------------ 154 (541)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGGGCS---SCCEEEESSSCCC------------
T ss_pred HHHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHhhCC---CccEEEEecCCCC------------
Confidence 9999999999999999999999999999999999999888777666655443 3445555543210
Q ss_pred cccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHH--HHHhCCCCCCEEEEecchh
Q 036361 162 VDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANA--LIDWAVPKQPVYLWTLPMF 239 (485)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~ 239 (485)
.....++++....... ....++++++++|||||||.||+|+++|+++..++... ...+.+.++|++++.+|++
T Consensus 155 -~~~~~~~~~~~~~~~~----~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 229 (541)
T 1v25_A 155 -EGYLAYEEALGEEADP----VRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMF 229 (541)
T ss_dssp -TTCEEHHHHCCSCCCC----CCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTT
T ss_pred -cccccHHHHhhccCCc----ccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccch
Confidence 0112233332222111 23456899999999999999999999999998776553 2446788999999999999
Q ss_pred hHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhh
Q 036361 240 HANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPV 316 (485)
Q Consensus 240 ~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~ 316 (485)
|.+++..++.+++.|+++++.+ .+++..+++.++++++|+++++|+++..|.+.. ....++++|.+++||+++++++
T Consensus 230 h~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~ 309 (541)
T 1v25_A 230 HVNAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGHRLKTLRRLVVGGSAAPRSL 309 (541)
T ss_dssp SHHHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTCCCSSCCEEEECSSCCCHHH
T ss_pred hhhHHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCCcchhccEEEECCCCCCHHH
Confidence 9999877788999999999987 479999999999999999999999999998654 2356789999999999999999
Q ss_pred hhhhhccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEE
Q 036361 317 LSRTESMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVV 396 (485)
Q Consensus 317 ~~~~~~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~ 396 (485)
.++++.+++++++.||+||++++++.+.....+...+.+.......++|+|.+++ +++|+|+ ++++++.++.+.|||+
T Consensus 310 ~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~-~~~i~d~-~g~~~~~~~~~~GEl~ 387 (541)
T 1v25_A 310 IARFERMGVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLV-RLRVADE-EGRPVPKDGKALGEVQ 387 (541)
T ss_dssp HHHHHHTTCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTC-EEEEECT-TSCBCCSSSCCCEEEE
T ss_pred HHHHHHhCCceeecccccccccceecccccccccccCccccccccCCCCCcCCCc-EEEEECC-CCCCCCCCCCcceEEE
Confidence 9999777999999999999988776654333222233333334567999999998 9999996 7888885433689999
Q ss_pred EecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEe
Q 036361 397 LRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVA 476 (485)
Q Consensus 397 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~ 476 (485)
++||+++.||+++++.+...|..+|||+|||+|++|+||+++|+||.+|+||++|++|+|.+||++|.+||+|.+|+|++
T Consensus 388 v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~ 467 (541)
T 1v25_A 388 LKGPWITGGYYGNEEATRSALTPDGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHPKVKEAAVVA 467 (541)
T ss_dssp EESTTSBSSCBTCHHHHHTTBCTTSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHHHHCC----------CEEE
T ss_pred EeCcchhccccCChhhhhhhccCCCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHHHHHHHHHhCCCceEEEEEE
Confidence 99999999999999999999988999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC
Q 036361 477 RPDKFWGE 484 (485)
Q Consensus 477 ~~~~~~g~ 484 (485)
.+++.+||
T Consensus 468 ~~~~~~~~ 475 (541)
T 1v25_A 468 IPHPKWQE 475 (541)
T ss_dssp EECSSSSE
T ss_pred ecCCCcCc
Confidence 99988775
No 2
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=5e-74 Score=578.47 Aligned_cols=443 Identities=27% Similarity=0.381 Sum_probs=381.7
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+++++|.++++++|+++|+++. ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 21 ~~~l~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~la~~~~Gav 100 (536)
T 3ni2_A 21 NLPLHSYVLENLSNHSSKPCLINGANGDVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEFVLAFLGASHRGAI 100 (536)
T ss_dssp SCCHHHHHTTTGGGSTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred CCcHHHHHHHHhhcCCCceEEEECCCCCEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCE
Confidence 478999999999999999999986 589999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|++|..+.+++.++++.++++++|++....+.+.+..... ...++.++... .....+++
T Consensus 101 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~--------------~~~~~~~~ 161 (536)
T 3ni2_A 101 ITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARES-----DVKVMCVDSAP--------------DGCLHFSE 161 (536)
T ss_dssp EEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHH-----TCEEEESSCCC--------------TTCEETHH
T ss_pred EeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhc-----CceEEEecCCC--------------CCccCHHH
Confidence 999999999999999999999999999998877776654432 12344443321 11122333
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHhHHHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHANGWGY 246 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~ 246 (485)
+....... .......++++++++|||||||.||+|+++|+++...+..... .+.+.+++++++.+|++|.+++..
T Consensus 162 ~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~ 240 (536)
T 3ni2_A 162 LTQADENE-APQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIYALNS 240 (536)
T ss_dssp HHTSCGGG-CCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHHHHHH
T ss_pred Hhhccccc-cccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHHHHHH
Confidence 32222111 1222356789999999999999999999999999887766543 345788999999999999999865
Q ss_pred -HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-c
Q 036361 247 -TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-S 322 (485)
Q Consensus 247 -~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~ 322 (485)
++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....++++|.+++||+++++++.++++ .
T Consensus 241 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~~~~~ 320 (536)
T 3ni2_A 241 IMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDLDKHDLSSLRMIKSGGAPLGKELEDTVRAK 320 (536)
T ss_dssp THHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCGGGSCCTTCCEEEEESSCCCHHHHHHHHHH
T ss_pred HHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhCcccccCCCccceEEEECCCCCCHHHHHHHHHH
Confidence 788899999999999999999999999999999999999999999876 345688999999999999999999998 5
Q ss_pred c-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCc
Q 036361 323 M-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGC 401 (485)
Q Consensus 323 ~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~ 401 (485)
+ ++++++.||+||++++++.+....... .....+++|.|.+++ +++|+|+++++++++| +.|||+++|++
T Consensus 321 ~~~~~l~~~YG~TE~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~GEl~v~g~~ 391 (536)
T 3ni2_A 321 FPQARLGQGYGMTEAGPVLAMCLAFAKEP------FDIKPGACGTVVRNA-EMKIVDPETGASLPRN--QPGEICIRGDQ 391 (536)
T ss_dssp CTTSEEEEEEECGGGSSEEEECGGGSSSC------CCCCTTCCCEECSSC-EEEEECTTTCCBCCTT--CCEEEEEESTT
T ss_pred CCCCCccccccccccchhhhcccccCCcc------ccCCCCCeeEeCCCc-EEEEEeCCCCcCCCCC--CccEEEEeCcc
Confidence 5 899999999999987766543211100 012346889999999 9999998899999999 88999999999
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...|..++||+|||+|++|+||+++++||.+|+||++|++|+|.+||++|.+||+|.+|+|++.+++.
T Consensus 392 v~~GY~~~p~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~~~~ 471 (536)
T 3ni2_A 392 IMKGYLNDPEATSRTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIAHPEISDAAVVGLKDED 471 (536)
T ss_dssp SCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETT
T ss_pred cchhhcCChhHHHhhccCCCceEcccEEEEcCCceEEEEecccceEEECCEEECHHHHHHHHHhCCCcceEEEEeeecCC
Confidence 99999999999999998799999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCC
Q 036361 482 WGE 484 (485)
Q Consensus 482 ~g~ 484 (485)
.|+
T Consensus 472 ~g~ 474 (536)
T 3ni2_A 472 AGE 474 (536)
T ss_dssp TEE
T ss_pred CCc
Confidence 775
No 3
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=1.4e-73 Score=576.76 Aligned_cols=442 Identities=23% Similarity=0.349 Sum_probs=369.6
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEEeCC--------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHH
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIVYNN--------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYEL 80 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~~~~--------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~ 80 (485)
...+..++.++|+++++++|+++|+++.+ +++||+||.++++++|++|.+.|+++||+|+|+++|+++++++
T Consensus 14 ~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~ 93 (549)
T 3g7s_A 14 LYYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVMT 93 (549)
T ss_dssp CCCCCCCTTHHHHHHHHHHTTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHhCCCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHH
Confidence 34567899999999999999999999987 8999999999999999999999999999999999999999999
Q ss_pred HHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 81 QFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 81 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
+|||+++|++++||+|..+.+++.++++.++++++|++....+.+........ ...++..+...
T Consensus 94 ~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~------------ 157 (549)
T 3g7s_A 94 IYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKTG----VERVFVVGGEV------------ 157 (549)
T ss_dssp HHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTSC----CCEEEEETCSS------------
T ss_pred HHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhCC----CcEEEEeCCCC------------
Confidence 99999999999999999999999999999999999999988887776655433 34455544221
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFH 240 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 240 (485)
..+.++...............++++++++|||||||.||+|+++|+++..++......+++.+++++++.+|++|
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~ 232 (549)
T 3g7s_A 158 -----NSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFH 232 (549)
T ss_dssp -----SCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTS
T ss_pred -----cCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHH
Confidence 222333333222222222223479999999999999999999999999999999888899999999999999999
Q ss_pred HhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhh
Q 036361 241 ANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPV 316 (485)
Q Consensus 241 ~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~ 316 (485)
.+++..++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+.. ....++++|.+++||+++++++
T Consensus 233 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gg~~l~~~~ 312 (549)
T 3g7s_A 233 SAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPAL 312 (549)
T ss_dssp HHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCCCCCTTCCEEEEESSCCCHHH
T ss_pred HHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcccCCccceeEEEeCCccCCHHH
Confidence 999888888899999999999999999999999999999999999999998654 2256889999999999999999
Q ss_pred hhhhhc-----cC---CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCC
Q 036361 317 LSRTES-----MG---FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRD 388 (485)
Q Consensus 317 ~~~~~~-----~~---~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g 388 (485)
.+++.+ ++ +++++.||+||++++++.+... ......++|.|.+++ +++|+|+++++++++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~~~G~p~~~~-~~~i~d~~~g~~~~~g 381 (549)
T 3g7s_A 313 VEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPL----------RLDKSTTQGVPMSDI-ELKVISLEDGRELGVG 381 (549)
T ss_dssp HHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEEECCGG----------GGGGTTSCCEECTTC-EEEEECSSSCCEECTT
T ss_pred HHHHHHHHHhhcCCccccccceEeccccchhhhcCCcc----------ccCcCCCccccCCCC-EEEEEeCCCCcCCCCC
Confidence 999874 45 8999999999998877654311 113456889999998 9999998899999999
Q ss_pred CceecEEEEecCcccccccCChhhhccccc--CCC--eeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh
Q 036361 389 GVSLGEVVLRGGCVTVGYFKDKESTRRCIS--DNG--WFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY 464 (485)
Q Consensus 389 ~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--~~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~ 464 (485)
+.|||+|+|++++.||+++++.+...|. .+| ||+|||+|++|+||.|+|+||.+|+||++|++|+|.|||++|.
T Consensus 382 --~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 459 (549)
T 3g7s_A 382 --ESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFELEALLM 459 (549)
T ss_dssp --CCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEEEEECTTSCEEEEEEC------------CHHHHHHHT
T ss_pred --CceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHHHHHHHH
Confidence 8899999999999999999999999883 367 9999999999999999999999999999999999999999999
Q ss_pred cCcCcceeEEEeccCCCCCC
Q 036361 465 SNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 465 ~~~~v~~~~v~~~~~~~~g~ 484 (485)
+||+|.+|+|++.+++..|+
T Consensus 460 ~~p~V~~a~Vv~~~~~~~g~ 479 (549)
T 3g7s_A 460 KHEAVMDVAVIGKPDEEAGE 479 (549)
T ss_dssp TSTTEEEEEEECCCC-----
T ss_pred hCCCeeeEEEEeeEccccCc
Confidence 99999999999999988776
No 4
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=3.7e-73 Score=572.13 Aligned_cols=439 Identities=22% Similarity=0.310 Sum_probs=375.4
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
+...++.++|+++++++|+++|+.+.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 22 ~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 101 (539)
T 1mdb_A 22 WAGETFGDLLRDRAAKYGDRIAITCGNTHWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFALFRLGAL 101 (539)
T ss_dssp SCSCCHHHHHHHHHHHHTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHHHHHHTCE
T ss_pred ccCCCHHHHHHHHHHHCCCCEEEEeCCCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCeE
Confidence 34579999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
++|++|..+.+++.++++.++++++|++.... ..+.......+ ....++..++..
T Consensus 102 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~----------------- 161 (539)
T 1mdb_A 102 PVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLP---TLKNIIVAGEAE----------------- 161 (539)
T ss_dssp EEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCT---TCCCEEEESCCT-----------------
T ss_pred EecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCC---CccEEEEcCCcc-----------------
Confidence 99999999999999999999999999987542 22223322222 233344433211
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
.+.++...... ........++++++++|||||||.||+|+++|+++...+......+++++++++++.+|++|.+++.
T Consensus 162 -~~~~~~~~~~~-~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~ 239 (539)
T 1mdb_A 162 -EFLPLEDLHTE-PVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLS 239 (539)
T ss_dssp -TSEEGGGCCCC-CCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHH
T ss_pred -chhhhhhcccc-ccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhh
Confidence 11111111111 1111235678999999999999999999999999999988888888999999999999999999987
Q ss_pred H--HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 246 Y--TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 246 ~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....++++|.+++||+++++++.++++
T Consensus 240 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~ 319 (539)
T 1mdb_A 240 SPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAKFSAEAARRVK 319 (539)
T ss_dssp SSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSCCCHHHHTTHH
T ss_pred HHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCCCCHHHHHHHH
Confidence 4 788999999999999999999999999999999999999999998654 446789999999999999999999998
Q ss_pred -ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecC
Q 036361 322 -SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGG 400 (485)
Q Consensus 322 -~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~ 400 (485)
.+++++++.||+||++..+.... ........++|+|.++..+++|+|+ +++++++| +.|||+++|+
T Consensus 320 ~~~~~~~~~~YG~TE~~~~~~~~~----------~~~~~~~~~~G~p~~~~~~~~i~d~-~~~~~~~g--~~GEl~v~g~ 386 (539)
T 1mdb_A 320 AVFGCTLQQVFGMAEGLVNYTRLD----------DPEEIIVNTQGKPMSPYDESRVWDD-HDRDVKPG--ETGHLLTRGP 386 (539)
T ss_dssp HHTCSEEEEEEECTTSCEEECCTT----------SCHHHHHHCCCEESSTTCEEEEECT-TSCBCCTT--CCEEEEEECT
T ss_pred HHhCCcEEEEEcCCCCcccccCCC----------CcHHhcCCCCCcccCCCceEEEECC-CCCCCcCC--CcceEEeeCc
Confidence 56999999999999653322111 0112235689999976558999995 78999999 8899999999
Q ss_pred cccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 401 CVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 401 ~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
+++.||+++++.+...|..+|||+|||+|++|+||+|+|+||.+|+||++|++|+|.|||++|.+||+|.+|+|++.+++
T Consensus 387 ~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~ 466 (539)
T 1mdb_A 387 YTIRGYYKAEEHNAASFTEDGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLLAHPAVHDAAMVSMPDQ 466 (539)
T ss_dssp TSCSSCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHTTSTTEEEEEEEEEEET
T ss_pred ccchhhcCChhhhhhhccCCCCeecCceEEECCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCcceEEEEecccc
Confidence 99999999999999999879999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCC
Q 036361 481 FWGE 484 (485)
Q Consensus 481 ~~g~ 484 (485)
.+||
T Consensus 467 ~~g~ 470 (539)
T 1mdb_A 467 FLGE 470 (539)
T ss_dssp TTEE
T ss_pred ccCc
Confidence 8775
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=1.5e-73 Score=575.69 Aligned_cols=443 Identities=18% Similarity=0.261 Sum_probs=339.2
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
....|+.++|+++++++|+++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 27 ~~~~tl~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~Gav 106 (544)
T 3o83_A 27 WIDQPLTRILTVGVQSHPHSLAIICGERQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFALLKAGVV 106 (544)
T ss_dssp CCCCCTTHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHHHHhCCCceEEEcCCCceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHhCcE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
++|+++..+.+++.++++.++++++|++.... ........... ....++..+.... .
T Consensus 107 ~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~ 168 (544)
T 3o83_A 107 VLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNL---SPEIILMLNHQAT---------------D 168 (544)
T ss_dssp EEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTC---CCSEEEEETCCTT---------------S
T ss_pred EecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhccc---CcceEEEecCCcc---------------c
Confidence 99999999999999999999999999988654 33333333222 3344444443211 0
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
..+.++...............++++++++|||||||.||+|+++|+++..++......+++.++|++++.+|++|.+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~ 248 (544)
T 3o83_A 169 FGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLS 248 (544)
T ss_dssp EEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHH
T ss_pred cchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecc
Confidence 11111222222222222345678999999999999999999999999999999998889999999999999999999887
Q ss_pred H--HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 246 Y--TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 246 ~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..+++.. ....++++|.+++||+++++++.+++.
T Consensus 249 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~l~~~~~~~~~ 328 (544)
T 3o83_A 249 SPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGASFPESLARQVP 328 (544)
T ss_dssp SSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSCCCHHHHTHHH
T ss_pred hHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCCCCHHHHHHHH
Confidence 4 788999999999999999999999999999999999999999998654 234578999999999999999999998
Q ss_pred -ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccc-cCcceeEEecCCCCCcccCCCceecEEEEec
Q 036361 322 -SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKT-VGLTEVDVVNPETGESVKRDGVSLGEVVLRG 399 (485)
Q Consensus 322 -~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~-~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~ 399 (485)
.+++++++.||+||++..+.... ........++|+|+ ++. +++|+|+ +++++++| +.|||+++|
T Consensus 329 ~~~~~~~~~~YG~TE~~~~~~~~~----------~~~~~~~~~~G~p~~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g 394 (544)
T 3o83_A 329 EVLNCKLQQVFGMAEGLVNYTRLD----------DSDEQIFTTQGRPISSDD-EIKIVDE-QYREVPEG--EIGMLATRG 394 (544)
T ss_dssp HHHCSEEEEEEECTTSCEEECCTT----------SCHHHHHHCCCEESCTTC-EEEEECT-TSCBCCTT--CCEEEEEEC
T ss_pred HHhCCcEEeeeccccccceeecCC----------CchhhccCCCceecCCCc-EEEEECC-CCCCCCCC--CeeEEEEec
Confidence 45999999999999875443321 11123456889996 666 9999994 89999999 889999999
Q ss_pred CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 400 GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 400 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
++++.||+++++.+...|..++||+|||+|++++||.++|+||.+|+||++|++|+|.|||++|.+||+|.+|+|++.++
T Consensus 395 ~~v~~GY~~~~~~t~~~f~~~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~ 474 (544)
T 3o83_A 395 PYTFCGYYQSPEHNSQVFDEDNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEEIEKLILLHPEVMHAALVAIVD 474 (544)
T ss_dssp TTSCSCCTTCHHHHHHHBCTTCCEEEEEEEEECTTSCEEEEEEEC-----------------------------------
T ss_pred CCcchhhcCChhhhhhhCCCCCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHHHHHHHHhCCCccEEEEEeccC
Confidence 99999999999999999987999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 480 KFWGET 485 (485)
Q Consensus 480 ~~~g~~ 485 (485)
+..|++
T Consensus 475 ~~~g~~ 480 (544)
T 3o83_A 475 EQFGEK 480 (544)
T ss_dssp ------
T ss_pred CCCCce
Confidence 988763
No 6
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=1.2e-73 Score=577.44 Aligned_cols=447 Identities=23% Similarity=0.303 Sum_probs=338.3
Q ss_pred CCCCCcchhHHHHHHHhhcCCCcEEE---e--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHh
Q 036361 9 ANSTPLTTLGFLERAATAYSDCPSIV---Y--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 9 ~~~~~~tl~~~l~~~a~~~p~~~a~~---~--~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
......|+.++|.++++++|+++|++ + .++++||+||.++++++|++|++.|+++||+|+++++|++++++++||
T Consensus 15 ~~~~~~tl~~~l~~~a~~~p~~~a~~a~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 94 (550)
T 3rix_A 15 YPLEDGTAGEQLHKAMKRYALVPGTIAFTDAHIEVNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMPVLG 94 (550)
T ss_dssp SCCCCSCHHHHHHHHHHHHHTSTTCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHH
T ss_pred CCcccCCHHHHHHHHHHhCCCCceEEEeeecCCCcEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHHHHH
Confidence 34556899999999999999999976 3 458999999999999999999999999999999999999999999999
Q ss_pred hhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccc
Q 036361 84 VPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVD 163 (485)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (485)
|+++|++++|+++.++.+++.++++.++++++|++.+..+.+.......+ ....++.++..... .
T Consensus 95 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------------~ 159 (550)
T 3rix_A 95 ALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQKKLP---IIQKIIIMDSKTDY------------Q 159 (550)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHHHCT---TCCEEEETTCSSCB------------T
T ss_pred HHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHhhCC---CcceEEEEcCCccc------------c
Confidence 99999999999999999999999999999999999988888777766655 45566665543211 1
Q ss_pred cccccccccccCCC------CCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEE
Q 036361 164 FIDTYEGFVEEGDP------KYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLW 234 (485)
Q Consensus 164 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~ 234 (485)
....+.++...... .........++++++++|||||||.||+|+++|+++...+...... +.+.+++++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~ 239 (550)
T 3rix_A 160 GFQSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILS 239 (550)
T ss_dssp TBCBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEE
T ss_pred CcccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEE
Confidence 11222222221111 1111122345789999999999999999999999998887766554 46788999999
Q ss_pred ecchhhHhHHHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCC
Q 036361 235 TLPMFHANGWGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 235 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l 312 (485)
.+|++|.+++..++.++..|+++++.+.+++..+++.++++++|+++++|+++..|.+.. ....++++|.+++||+++
T Consensus 240 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l 319 (550)
T 3rix_A 240 VVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLIDKYDLSNLHEIASGGAPL 319 (550)
T ss_dssp CSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGGGGSCCTTCCEEEECSSCC
T ss_pred echHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccccccCcccccEEEEecCCC
Confidence 999999999988889999999999999999999999999999999999999999998876 445688999999999999
Q ss_pred Chhhhhhhh-ccCCe-eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCc
Q 036361 313 PAPVLSRTE-SMGFV-VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGV 390 (485)
Q Consensus 313 ~~~~~~~~~-~~~~~-i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~ 390 (485)
++++.+++. .++.. +++.||+||+++.++.+.... ....++|+|.+++ +++|+|+++++++++|
T Consensus 320 ~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~~~-----------~~~~~vG~~~~~~-~~~i~d~~~~~~~~~g-- 385 (550)
T 3rix_A 320 SKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPEGD-----------DKPGAVGKVVPFF-EAKVVDLDTGKTLGVN-- 385 (550)
T ss_dssp CHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCTTC-----------CCTTEEEEECTTC-EEEEECTTTCCBCCTT--
T ss_pred CHHHHHHHHHHcCCCccccccCcCccccceecCCCCC-----------CCCCCcccccCCc-EEEEEeCCCCcCCCCC--
Confidence 999999998 56764 899999999997776543211 2346899999998 9999998889999999
Q ss_pred eecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcc
Q 036361 391 SLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVN 470 (485)
Q Consensus 391 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~ 470 (485)
+.|||+|+|++++.||+++++.+...|..+|||+|||+|++++||+++++||.+|+||++|++|+|.+||++|.+||+|.
T Consensus 386 ~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~ 465 (550)
T 3rix_A 386 QRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAPAELESILLQHPNIF 465 (550)
T ss_dssp CCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEC------------------------------
T ss_pred CCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcEEEEeCCceEEEEecchheeEECCEEECHHHHHHHHHhCCCcc
Confidence 88999999999999999999999999977999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEeccCCCCCC
Q 036361 471 EAAVVARPDKFWGE 484 (485)
Q Consensus 471 ~~~v~~~~~~~~g~ 484 (485)
+|+|++.+++..|+
T Consensus 466 ~a~vv~~~~~~~g~ 479 (550)
T 3rix_A 466 DAGVAGLPDDDAGE 479 (550)
T ss_dssp --------------
T ss_pred eEEEEEeecCCCCc
Confidence 99999999988876
No 7
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=1.6e-72 Score=564.56 Aligned_cols=442 Identities=29% Similarity=0.384 Sum_probs=376.1
Q ss_pred CCCCCCCCcchhHHHHHHHhhcCCCcEEEeCCe--eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHh
Q 036361 6 PNHANSTPLTTLGFLERAATAYSDCPSIVYNNT--TYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 6 ~~~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~~--~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
..+......|+.++|+++++.+|+++|+++.++ ++||+||.++++++|++|++.|+++||+|+++++|++++++++||
T Consensus 8 ~~~~~~~~~~l~~~l~~~a~~~p~~~A~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 87 (517)
T 3r44_A 8 HVDDDDKMKNIGWMLRQRATVSPRLQAYVEPSTDVRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLFYG 87 (517)
T ss_dssp ----CGGGGCHHHHHHHHHHHSTTSEEEEEGGGTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred cCCCcccccCHHHHHHHHHHhCCCCeEEEeCCcCceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHHHH
Confidence 345567788999999999999999999999876 999999999999999999999999999999999999999999999
Q ss_pred hhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccc
Q 036361 84 VPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVD 163 (485)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (485)
|+++|++++|++|.++.+++.++++.++++++|++....+.+......... ...++.+...
T Consensus 88 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---------------- 148 (517)
T 3r44_A 88 AAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQADP---PGTVTDWIGA---------------- 148 (517)
T ss_dssp HHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSSSC---CTTCCEEEEH----------------
T ss_pred HHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhccCC---ccEEEEccCc----------------
Confidence 999999999999999999999999999999999998887777666544331 1111111100
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhH
Q 036361 164 FIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANG 243 (485)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g 243 (485)
..+.+........ .......++++++++|||||||.||+|+++|+++...+......+++.++|++++.+|++|..+
T Consensus 149 --~~~~~~~~~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~ 225 (517)
T 3r44_A 149 --DSLAERLRSAAAD-EPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAA 225 (517)
T ss_dssp --HHHHHHHHHCCCC-CCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHH
T ss_pred --ccHHHHhhccCcC-CCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHH
Confidence 1111222211111 1122356789999999999999999999999999999999888899999999999999999999
Q ss_pred HHHHHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh
Q 036361 244 WGYTWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE 321 (485)
Q Consensus 244 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~ 321 (485)
+...+.+++.|+++++.+.+++..+++.++++++|++.++|++++.|.+.. ....++++|.+++||+++++++.+.+.
T Consensus 226 ~~~~~~~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~ 305 (517)
T 3r44_A 226 LTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAPMPEALIKIYA 305 (517)
T ss_dssp HHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSCCCHHHHHHHH
T ss_pred HHHHHHHHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCCCCHHHHHHHH
Confidence 987666666999999999999999999999999999999999999998765 345678999999999999999999999
Q ss_pred ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCc
Q 036361 322 SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGC 401 (485)
Q Consensus 322 ~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~ 401 (485)
+.++++++.||+||+++.++..... .......++|.|.++. +++|+|+ ++.+++.| .|||+++|++
T Consensus 306 ~~~~~~~~~YG~TE~~~~~~~~~~~---------~~~~~~~~~G~~~~~~-~~~i~d~-~~~~~~~g---~GEl~v~g~~ 371 (517)
T 3r44_A 306 AKNIEVVQGYALTESCGGGTLLLSE---------DALRKAGSAGRATMFT-DVAVRGD-DGVIREHG---EGEVVIKSDI 371 (517)
T ss_dssp HTTCEEEEEEECGGGTTCEEEECGG---------GTTTTTTCCBEECTTE-EEEEECT-TSCEESSE---EEEEEEEETT
T ss_pred hcCCcEEEeecccccccceeecCCc---------cccccCCCCCcCCCCe-EEEEECC-CCCCCCCC---CeEEEEeCcc
Confidence 7699999999999998766554211 1123346889999998 9999996 78887775 4999999999
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
++.||+++++.+...|. ++||+|||+|++++||.|+|+||.+|+||++|++|+|.|||++|.++|+|.+|+|++.+++.
T Consensus 372 v~~GY~~~p~~t~~~f~-~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~Vv~~~~~~ 450 (517)
T 3r44_A 372 LLKEYWNRPEATRDAFD-NGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVSEVAVIGLPDEK 450 (517)
T ss_dssp SCSEETTCHHHHHHTEE-TTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHHHHHHHTTSTTEEEEEEEEEEETT
T ss_pred hhhhhCCChhhhHhhhc-CCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHHHHHHHHhCCCEeEEEEEeccccc
Confidence 99999999999999997 89999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCC
Q 036361 482 WGE 484 (485)
Q Consensus 482 ~g~ 484 (485)
+|+
T Consensus 451 ~g~ 453 (517)
T 3r44_A 451 WGE 453 (517)
T ss_dssp TEE
T ss_pred cCc
Confidence 775
No 8
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=5.3e-72 Score=558.96 Aligned_cols=430 Identities=25% Similarity=0.348 Sum_probs=368.1
Q ss_pred hHHHHHHHhhcCCCcEEE---eCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 17 LGFLERAATAYSDCPSIV---YNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 17 ~~~l~~~a~~~p~~~a~~---~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
.++|+++++++|++.|+. +.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 3 ~~l~~~~a~~~p~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~~vp 82 (503)
T 4fuq_A 3 ANLFARLFDKLDDPHKLAIETAAGDKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAGGVYLP 82 (503)
T ss_dssp CCHHHHHHSCCSCTTSEEEEETTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCEEEE
T ss_pred hhHHHHHHHhCCCCceEEEecCCCcEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCcEEEe
Confidence 357899999999999988 46689999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
++|.++.+++.++++.++++++|++.+..+.+........ ..+..++.... ..+.....
T Consensus 83 l~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------------~~~~~~~~ 141 (503)
T 4fuq_A 83 LNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKVG-----ATVETLGPDGR----------------GSLTDAAA 141 (503)
T ss_dssp CCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHHT-----CEEEECCTTSC----------------SHHHHHHH
T ss_pred cCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhcC-----ceEEEecCCcc----------------cccchhhh
Confidence 9999999999999999999999999876665544433322 23333322210 00111111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHHh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMAA 252 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l~ 252 (485)
.. ..........++++++++|||||||.||+|+++|+++..++......+++.++|++++.+|++|.+++.. .+.+++
T Consensus 142 ~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~ 220 (503)
T 4fuq_A 142 GA-SEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLF 220 (503)
T ss_dssp TS-CSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHH
T ss_pred cC-CCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHH
Confidence 11 1111122356789999999999999999999999999999999888999999999999999999999765 678889
Q ss_pred hcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-ccCCeeee
Q 036361 253 VGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCH 329 (485)
Q Consensus 253 ~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~ 329 (485)
.|+++++.+.+++..+++.++ ++|+++++|+++..+++.. ....++++|.+++||+++++++.+.+. .+++++++
T Consensus 221 ~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~ 298 (503)
T 4fuq_A 221 ARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQSPRLTKETTGHMRLFISGSAPLLADTHREWSAKTGHAVLE 298 (503)
T ss_dssp TTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTCSTTTTTTCCEEEECSSCCCHHHHHHHHHHHSCCEEE
T ss_pred hCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCccccchhhcEEEEECCCCCCHHHHHHHHHHhCCCccc
Confidence 999999999999999999998 8999999999999999876 345578999999999999999999998 55999999
Q ss_pred ccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCC
Q 036361 330 GYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKD 409 (485)
Q Consensus 330 ~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~ 409 (485)
.||+||++..+.... .. .....++|+|.+++ +++|+|+++++++++| +.|||+++|++++.||+++
T Consensus 299 ~YG~TE~~~~~~~~~-~~----------~~~~~~~G~p~~~~-~~~i~d~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~ 364 (503)
T 4fuq_A 299 RYGMTETNMNTSNPY-DG----------DRVPGAVGPALPGV-SARVTDPETGKELPRG--DIGMIEVKGPNVFKGYWRM 364 (503)
T ss_dssp CCEETTTEECBCCCS-SS----------CCCTTEEEEBCTTC-EEEEECTTTCCBCCTT--CCEEEEEESTTSCCCBTTC
T ss_pred eEcccccCcccccCC-CC----------CCcCCccccCCCCe-EEEEEECCCCCCCcCC--CceEEEEECCchhhhhcCC
Confidence 999999986643221 11 12235899999998 9999998899999999 8899999999999999999
Q ss_pred hhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 410 KESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 410 ~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
++.+...|..++||+|||+|++++||.++++||.+|+||++|++|+|.|||++|.+||+|.+|+|++.+++..|+
T Consensus 365 ~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~~~ 439 (503)
T 4fuq_A 365 PEKTKSEFRDDGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKEIESEIDAMPGVVESAVIGVPHADFGE 439 (503)
T ss_dssp HHHHHHTBCTTSCEEEEEEEEECTTCEEEECCSSTTCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEETTTEE
T ss_pred hhhhHhhhCCCCCeEcceeEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeEEEEEEeEchhcCc
Confidence 999999998899999999999999999999999999999999999999999999999999999999999987765
No 9
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=3.2e-72 Score=562.36 Aligned_cols=434 Identities=25% Similarity=0.393 Sum_probs=337.6
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..++|+.++|+++++++|+++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 3 ~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~Ga~ 82 (509)
T 3ivr_A 3 LHDFTLADVYRRNAALFPDRTAFMVDGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIGAVALIGAI 82 (509)
T ss_dssp TTCCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTTCE
T ss_pred CCcCCHHHHHHHHHHHCCCceEEEECCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCCE
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|++|..+.+++.++++.++++++|++.+..+.+........ ....++.+++.. ..+..
T Consensus 83 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-----------------~~~~~ 142 (509)
T 3ivr_A 83 LLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLPSLG---GVKKAYAIGDGS-----------------GPFAP 142 (509)
T ss_dssp EEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGGGCS---SCCEEEESSCCC-----------------SSCEE
T ss_pred EEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhcccC---CceEEEEcCCCC-----------------cChhh
Confidence 9999999999999999999999999999988777555554443 445555554321 11122
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGM 250 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 250 (485)
+...............++++++++|||||||.||+|+++|+++...+.+....+++.++|++++.+|++|.+++...+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~ 222 (509)
T 3ivr_A 143 FKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTL 222 (509)
T ss_dssp GGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHH
T ss_pred HhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHH
Confidence 22211111122234567899999999999999999999999999999998888999999999999999999999887777
Q ss_pred HhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc-CCeee
Q 036361 251 AAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFVVC 328 (485)
Q Consensus 251 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~i~ 328 (485)
+..|++.++...+++..+++.++++++|++.++|+++..|++......++++|.++.+|++ +..+++. .+ +++++
T Consensus 223 ~~~~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~~~~~g~~---~~~~~~~~~~~~~~~~ 299 (509)
T 3ivr_A 223 QQAGGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQAAPAQLASLRAVTGLDTP---ETIERFEATCPNATFW 299 (509)
T ss_dssp HHHTCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHCCGGGGTTCCEEEEECCH---HHHHHHHHHCTTCEEE
T ss_pred HHhCCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcccccchhhhheecccCCh---HHHHHHHHhcCCCeEE
Confidence 7777777777789999999999999999999999999999887766778899999999987 7777777 45 89999
Q ss_pred eccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccC
Q 036361 329 HGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFK 408 (485)
Q Consensus 329 ~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~ 408 (485)
+.||+||++++++.+.... ....+|+|.+++ +++|+|+ +++++++| +.|||+++|++++.||++
T Consensus 300 ~~YG~TE~~~~~~~~~~~~------------~~~~~G~p~~~~-~~~i~d~-~~~~~~~g--~~GEl~v~g~~~~~gY~~ 363 (509)
T 3ivr_A 300 ATFGQSETSGLSTFAPYRD------------RPKSAGRPLFWR-TVAVVDA-EDRPLPPG--EVGEIVLRGPTVFKGYWN 363 (509)
T ss_dssp EEEEEGGGTEEEEEEEGGG------------STTSCCEECTTC-EEEEECT-TSCBCCTT--CCEEEEEESTTSCCEETT
T ss_pred cccCccccccccccCcccc------------CCCcccccCCCc-EEEEECC-CCCCCCCC--CceEEEEecCCccccccC
Confidence 9999999998766543211 123489999998 9999996 69999999 889999999999999999
Q ss_pred ChhhhcccccCCCeeecCceEEEecCceEEEEccC--CceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 409 DKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRS--KDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 409 ~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~--~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+++.+...|. ++||+|||+|++++||+++++||. +|+||++|++|+|.+||++|.++|+|.+|+|++.+++.+|+
T Consensus 364 ~~~~t~~~f~-~g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~~~p~V~~a~vv~~~~~~~~~ 440 (509)
T 3ivr_A 364 NAAATQHAFR-NGWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAEVEGALKQHPAIADAVVIGVPDPQWSE 440 (509)
T ss_dssp CHHHHHHHTG-GGSEEEEEEEEECTTSCEEEEEEC-------------------------------------------
T ss_pred CHHHhHHHhh-cCCcccccEEEECCCceEEEeCCCCcceeEEECCEEECHHHHHHHHHhCCCceeEEEEeccccccCc
Confidence 9999999998 899999999999999999999999 99999999999999999999999999999999999988776
No 10
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.5e-71 Score=562.14 Aligned_cols=440 Identities=21% Similarity=0.258 Sum_probs=374.3
Q ss_pred cchh-HHHHHHHhhcCCCcEEEeC-----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 14 LTTL-GFLERAATAYSDCPSIVYN-----NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 14 ~tl~-~~l~~~a~~~p~~~a~~~~-----~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
.++. ++|+++|+.+|+++|+++. ++++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++
T Consensus 55 ~n~~~~~l~~~a~~~pd~~Al~~~~~~g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~lA~~~~ 134 (580)
T 3etc_A 55 FNFAYDVVDVYARDSPEKLAMIWCDDYGNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCMLGLHKL 134 (580)
T ss_dssp CCHHHHTHHHHHHHCTTCEEEEEEESSSCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhhCCCCEEEEEEcCCCCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHhC
Confidence 3444 9999999999999999972 378999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch--HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS--SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
|++++|+++.++.+++.++++.++++++|++.+.. +.+.+....++. ....++.++.... ...
T Consensus 135 Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-------------~~~ 199 (580)
T 3etc_A 135 GAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGD--IPLKKAKVGGDVL-------------EGW 199 (580)
T ss_dssp TCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCS--CCCEEEEESSSCC-------------TTC
T ss_pred CEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCC--cceEEEEeCCccc-------------ccc
Confidence 99999999999999999999999999999988765 555555544431 1144555543211 222
Q ss_pred cccccccccCCCCCCCC---CCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHh
Q 036361 166 DTYEGFVEEGDPKYKWV---RPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
..+.+............ ....++++++++|||||||.||+|.++|.++...+........+.+++++++..|++|..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (580)
T 3etc_A 200 IDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGK 279 (580)
T ss_dssp EEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTH
T ss_pred ccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHH
Confidence 33333333333222111 245678999999999999999999999999888777766667889999999999999988
Q ss_pred HHHH-HHHHHhhcceEeec--ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhhh
Q 036361 243 GWGY-TWGMAAVGATNICL--RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVLS 318 (485)
Q Consensus 243 g~~~-~~~~l~~G~~~~~~--~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~~ 318 (485)
+... ++.++..|+++++. ..+++..+++.|+++++|+++++|++++.|.+.. ....++++|.+++||+++++++.+
T Consensus 280 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~l~~lr~i~~gGe~l~~~~~~ 359 (580)
T 3etc_A 280 CVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKEDLSHYNFSTLKYAVVAGEPLNPEVFN 359 (580)
T ss_dssp HHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSCC---CCTTCCEEEECSSCCCHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcccccCCCccceEEEEccCCCCHHHHH
Confidence 7765 77888999998887 4789999999999999999999999999998764 445678999999999999999999
Q ss_pred hhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEE
Q 036361 319 RTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVL 397 (485)
Q Consensus 319 ~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v 397 (485)
++. .+++++++.||+||++..++...... ...+++|+|.+++ +++|+|+ +++++++| +.|||++
T Consensus 360 ~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~-----------~~~~~~G~p~~~~-~v~ivd~-~g~~~~~g--~~GEl~v 424 (580)
T 3etc_A 360 RFLEFTGIKLMEGFGQTETVVTIATFPWME-----------PKPGSIGKPTPGY-KIELMDR-DGRLCEVG--EEGEIVI 424 (580)
T ss_dssp HHHHHHSCCCEEEECCTTSSCCEECCTTSC-----------CCTTCCBEECTTC-EEEEECT-TSCBCCTT--CCEEEEE
T ss_pred HHHHHhCCeEecccccccccceeecCCCCC-----------CCCCccccCCCCC-EEEEECC-CCCCCCCC--CceEEEE
Confidence 998 46999999999999987665543211 1246899999999 9999996 79999999 8899999
Q ss_pred ec-----CcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCccee
Q 036361 398 RG-----GCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEA 472 (485)
Q Consensus 398 ~~-----~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~ 472 (485)
+| ++++.||+++++.+...|. +|||+|||+|++|+||+|+|+||.||+||++|++|+|.|||++|.+||+|.+|
T Consensus 425 ~~~~g~~~~~~~gY~~~p~~t~~~f~-~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~eIE~~l~~~p~V~~a 503 (580)
T 3etc_A 425 NTMEGKPVGLFVHYGKDPERTEETWH-DGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFEVESALIQHPAVLEC 503 (580)
T ss_dssp ECTTCCCTTCCCEETTCHHHHHHHEE-TTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHHHHHHHTTSTTEEEE
T ss_pred ecCCCCCCeeeccccCCHhHHHhhcC-CCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeeE
Confidence 97 7899999999999999998 89999999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCC
Q 036361 473 AVVARPDKFWGE 484 (485)
Q Consensus 473 ~v~~~~~~~~g~ 484 (485)
+|++.+++..|+
T Consensus 504 ~Vvg~~~~~~g~ 515 (580)
T 3etc_A 504 AITGVPDPVRGQ 515 (580)
T ss_dssp EEEEEEETTTEE
T ss_pred EEEeeeccCCCc
Confidence 999999988775
No 11
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.8e-71 Score=560.58 Aligned_cols=440 Identities=21% Similarity=0.267 Sum_probs=374.9
Q ss_pred cchhH-HHHHHHhhcCCCcEEEe--CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 14 LTTLG-FLERAATAYSDCPSIVY--NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 14 ~tl~~-~l~~~a~~~p~~~a~~~--~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
.++.+ ++.++++++ +++|+++ .++++||+||.++++++|+.|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 25 ~~l~~~~l~~~~~~~-~~~A~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~la~~~~Gav 103 (548)
T 2d1s_A 25 AGTQLRKYMERYAKL-GAIAFTNAVTGVDYSYAEYLEKSCCLGKALQNYGLVVDGRIALCSENCEEFFIPVIAGLFIGVG 103 (548)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEEETTTCCEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHHHHHHHHHTCE
T ss_pred CcHHHHHHHhhhccc-CCceEEEcCCCCEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCchhHHHHHHHHHhhCCE
Confidence 58899 899999999 9999998 4689999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|+++.++.+++.++++.++++++|++.+..+.+.......+ ....++.++..... .....+++
T Consensus 104 ~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~------------~~~~~~~~ 168 (548)
T 2d1s_A 104 VAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKTVT---TIKTIVILDSKVDY------------RGYQCLDT 168 (548)
T ss_dssp EEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHHST---TCCEEEETTCSSCB------------TTBCBHHH
T ss_pred EeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcCCC---CCCEEEEeCCcccc------------cccccHHH
Confidence 9999999999999999999999999999988777666554433 23455554432100 01122333
Q ss_pred ccccCCCC-CCCCCCC-----CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhH
Q 036361 171 FVEEGDPK-YKWVRPR-----SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHA 241 (485)
Q Consensus 171 ~~~~~~~~-~~~~~~~-----~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~ 241 (485)
+....... ....... .++++++++|||||||.||+|+++|+++..++...... +++.+++++++.+|++|.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~ 248 (548)
T 2d1s_A 169 FIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHG 248 (548)
T ss_dssp HHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSH
T ss_pred HHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHH
Confidence 33222111 1100101 23899999999999999999999999999888777665 577889999999999999
Q ss_pred hHHHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhh
Q 036361 242 NGWGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLS 318 (485)
Q Consensus 242 ~g~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~ 318 (485)
+++.. ++.++ .|+++++.+.+++..+++.|+++++|+++++|++++.|.+.. ....++++|.+++||+++++++.+
T Consensus 249 ~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~l~~~~~~ 327 (548)
T 2d1s_A 249 FGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAPLSKEVGE 327 (548)
T ss_dssp HHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSCCCHHHHH
T ss_pred HHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCccCCHHHHH
Confidence 99876 55566 999999999999999999999999999999999999998765 334678999999999999999999
Q ss_pred hhh-cc-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEE
Q 036361 319 RTE-SM-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVV 396 (485)
Q Consensus 319 ~~~-~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~ 396 (485)
++. .+ ++.+++.||+||++++++.+... .....++|.|.++. +++|+|+++++++++| +.|||+
T Consensus 328 ~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~-----------~~~~~~~G~~~~~~-~~~i~d~~~~~~~~~g--~~GEl~ 393 (548)
T 2d1s_A 328 AVARRFNLPGVRQGYGLTETTSAIIITPEG-----------DDKPGASGKVVPLF-KAKVIDLDTKKSLGPN--RRGEVC 393 (548)
T ss_dssp HHHHHTTCSCCEEEEECGGGSSEEEECCTT-----------CCCTTCCBEECTTC-EEEEECTTTCCBCCTT--CCEEEE
T ss_pred HHHHHcCCCceeeccccccccceeeecCcc-----------cCCCCCCCccCCCc-eEEEEeCCcCccCCCC--CCeEEE
Confidence 998 55 68899999999998766553211 12346899999998 9999998799999999 889999
Q ss_pred EecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEe
Q 036361 397 LRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVA 476 (485)
Q Consensus 397 v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~ 476 (485)
++|++++.||+++++.+...|..++||+|||+|++|+||+++++||.+|+||++|++|+|.+||++|.+||+|.+|+|++
T Consensus 394 v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~V~~ 473 (548)
T 2d1s_A 394 VKGPMLMKGYVNNPEATKELIDEEGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPSIFDAGVAG 473 (548)
T ss_dssp EESTTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCCBCHHHHHHHHHTSTTEEEEEEEE
T ss_pred ECCHHHhhhhcCChHHhhhcccCCcEEEccCEEEEcCCCeEEEeccccceEEECCEEECHHHHHHHHHhCCCccEEEEEE
Confidence 99999999999999999999977999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCC
Q 036361 477 RPDKFWGE 484 (485)
Q Consensus 477 ~~~~~~g~ 484 (485)
.+++.+||
T Consensus 474 ~~~~~~g~ 481 (548)
T 2d1s_A 474 VPDPVAGE 481 (548)
T ss_dssp EEETTTEE
T ss_pred EEcCCCCe
Confidence 99988775
No 12
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.6e-70 Score=549.13 Aligned_cols=425 Identities=25% Similarity=0.342 Sum_probs=358.0
Q ss_pred cchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 14 LTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
+|+.++|+++++++|+++|+.+. ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~tl~~~l~~~a~~~p~~~a~~~~~~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G~~~ 81 (504)
T 1t5h_X 2 QTVNEMLRRAATRAPDHCALAVPARGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILALHRLGAVP 81 (504)
T ss_dssp CCHHHHHHHHHHHCTTSEEEEETTTTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHHTCEE
T ss_pred CcHHHHHHHHHHhCCCceEEEEcCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHhCcEE
Confidence 47899999999999999999998 8899999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEE--cCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFV--DHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+|++|.++.+++.++++.++++++|+ +....+.+... .. . ..++.+++.... .
T Consensus 82 vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~---~~---~-~~~~~~~~~~~~------------------~ 136 (504)
T 1t5h_X 82 ALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQS---GS---G-ARIIFLGDLVRD------------------G 136 (504)
T ss_dssp EEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHH---CC---C-CEEEEGGGTEET------------------T
T ss_pred EecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhc---cc---c-ceeEEecchhhc------------------C
Confidence 99999999999999999999999999 66544433111 11 1 122222111000 0
Q ss_pred cccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCC--CCCCEEEEecchhhHhHHH-H
Q 036361 170 GFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAV--PKQPVYLWTLPMFHANGWG-Y 246 (485)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~-~ 246 (485)
........ .......++++++++|||||||.||+|+++|+++...+......+++ .+++++++.+|++|.+++. .
T Consensus 137 ~~~~~~~~--~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~ 214 (504)
T 1t5h_X 137 EPYSYGPP--IEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAV 214 (504)
T ss_dssp EECCCSCC--CCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTT
T ss_pred cccccCCc--cCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHH
Confidence 00000000 01123457899999999999999999999999999888888777777 8899999999999999984 4
Q ss_pred HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhhhh-
Q 036361 247 TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSRTE- 321 (485)
Q Consensus 247 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~~~- 321 (485)
++.++..|+++++.+.+++..+++.++++++|+++++|++++.|.+.. ....++++|.+++||+++++++.++++
T Consensus 215 ~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~l~~~~~~~~~~ 294 (504)
T 1t5h_X 215 LVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGATMPDAVLETVHQ 294 (504)
T ss_dssp HHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCcCCHHHHHHHHH
Confidence 788999999999999999999999999999999999999999997643 334678999999999999999999998
Q ss_pred ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCC---CcccCCCceecEEEEe
Q 036361 322 SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETG---ESVKRDGVSLGEVVLR 398 (485)
Q Consensus 322 ~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~---~~~~~g~~~~Gel~v~ 398 (485)
.++..+++.||+||++ .+.... .....++|.|.++. +++|+|+ ++ +++++| +.|||+++
T Consensus 295 ~~~~~~~~~YG~TE~~-~~~~~~-------------~~~~~~~g~p~~~~-~~~i~~~-~~~~~~~~~~g--~~GEl~v~ 356 (504)
T 1t5h_X 295 HLPGEKVNIYGTTEAM-NSLYMR-------------QPKTGTEMAPGFFS-EVRIVRI-GGGVDEIVANG--EEGELIVA 356 (504)
T ss_dssp HCCSEEEEEEEETTTE-EEEEEE-------------SCSSSSEEBCCTTC-CEEEECT-TSCTTCBCCTT--CCEEEEEE
T ss_pred hcCcceeeeecccccc-cccccc-------------CCCCCccccCCCCC-ceeEEec-cCCCCCcCCCC--CcceEEEe
Confidence 5589999999999993 222211 01235789999998 9999996 45 889998 88999999
Q ss_pred -cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEec
Q 036361 399 -GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVAR 477 (485)
Q Consensus 399 -~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~ 477 (485)
|++++.||+++++.+...|. +|||+|||+|++++||+++++||.+|+||++|++|+|.+||++|.+||+|.+|+|++.
T Consensus 357 gg~~~~~GY~~~~~~t~~~f~-~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~ 435 (504)
T 1t5h_X 357 ASDSAFVGYLNQPQATAEKLQ-DGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTEVVVIGL 435 (504)
T ss_dssp CCTTSCCCBTTCHHHHHHHEE-TTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHTTSTTEEEEEEEEE
T ss_pred CCceeeceecCCchhhhhhhc-CCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHHHHHHHHhCCCcceEEEEEe
Confidence 99999999999999999996 8999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC
Q 036361 478 PDKFWGE 484 (485)
Q Consensus 478 ~~~~~g~ 484 (485)
+++.+||
T Consensus 436 ~~~~~g~ 442 (504)
T 1t5h_X 436 ADQRWGQ 442 (504)
T ss_dssp ECSSSSE
T ss_pred ecCCCCc
Confidence 9988876
No 13
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=2.5e-70 Score=553.28 Aligned_cols=424 Identities=19% Similarity=0.221 Sum_probs=359.8
Q ss_pred CcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 13 PLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
..++.++|+++++.+|+++|+.+.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++
T Consensus 38 ~~~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~Gav~v 117 (563)
T 1amu_A 38 DKTIHQLFEEQVSKRPNNVAIVCENEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYV 117 (563)
T ss_dssp TCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEE
T ss_pred CCcHHHHHHHHHHHCCCCeEEEeCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEE
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|+++.++.+++.++++.++++++|++.+....+.. .. ....+..++... +.
T Consensus 118 pl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~----~~---~~~~~~~~~~~~-------------------~~--- 168 (563)
T 1amu_A 118 PIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHN----IQ---FNGQVEIFEEDT-------------------IK--- 168 (563)
T ss_dssp ECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTT----SC---CCSEEEECCCST-------------------TT---
T ss_pred EeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhh----cc---ccCceeeecchh-------------------hc---
Confidence 99999999999999999999999998765543321 11 112233222110 00
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.. .......+..++++++++|||||||.||+|++||+++...+......+++.++|++++..|++|..++..++.+++
T Consensus 169 ~~--~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~ 246 (563)
T 1amu_A 169 IR--EGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVWEMFMALL 246 (563)
T ss_dssp TS--CCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHHHHHHHHT
T ss_pred cc--cCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHHHHHHHHH
Confidence 00 0001112345689999999999999999999999999988888877888999999999999999999888889999
Q ss_pred hcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeee
Q 036361 253 VGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCH 329 (485)
Q Consensus 253 ~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~ 329 (485)
.|+++++.+. +++..+++.++++++|++.++|+++..+.. ..++++|.+++||+++++++.+++.+ .+++++
T Consensus 247 ~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~----~~~~~lr~~~~gG~~l~~~~~~~~~~-~~~~~~ 321 (563)
T 1amu_A 247 TGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDP----ERILSIQTLITAGSATSPSLVNKWKE-KVTYIN 321 (563)
T ss_dssp TTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCT----TTCCSCSEEEEESSCCCHHHHHHHTT-TSEEEE
T ss_pred CCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh----cccccccEEEEEEecCCHHHHHHHHh-CCeEEE
Confidence 9999999875 689999999999999999999999987754 34688999999999999999999886 489999
Q ss_pred ccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCC
Q 036361 330 GYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKD 409 (485)
Q Consensus 330 ~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~ 409 (485)
.||+||++.+++.+....... ....++|+|.+++ +++|+|+ +++++++| +.|||+++|++++.||+++
T Consensus 322 ~YG~TE~~~~~~~~~~~~~~~--------~~~~~vG~p~~~~-~v~i~d~-~~~~~~~g--~~GEl~v~g~~v~~GY~~~ 389 (563)
T 1amu_A 322 AYGPTETTICATTWVATKETI--------GHSVPIGAPIQNT-QIYIVDE-NLQLKSVG--EAGELCIGGEGLARGYWKR 389 (563)
T ss_dssp EECCGGGSSCSEEEECCSSCC--------CSSCCCBEECTTE-EEEEECT-TSCBCCTT--CEEEEEEEETTCCCEETTC
T ss_pred EECcCHHhHhheeeecccccC--------CCCCcccceeCCC-EEEEECC-CcCCCCCC--CcEEEEEechhhChhhCCC
Confidence 999999987666543221100 1235789999998 9999995 78999999 8899999999999999999
Q ss_pred hhhhcccccC------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 410 KESTRRCISD------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 410 ~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
++.+...|.+ ++||+|||+|++|+||+|+|+||.+|+||++|++|+|.+||++|.++|+|.+|+|++.+++..|
T Consensus 390 pe~t~~~f~~~~~~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~p~V~~a~Vv~~~~~~~~ 469 (563)
T 1amu_A 390 PELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSVHKDHQEQ 469 (563)
T ss_dssp HHHHHHHEEECSSSTTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHTTSTTEEEEEEEEEECTTSC
T ss_pred chhhhhhcccCCCCCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEEeecCCCC
Confidence 9999888853 3599999999999999999999999999999999999999999999999999999999998776
Q ss_pred C
Q 036361 484 E 484 (485)
Q Consensus 484 ~ 484 (485)
+
T Consensus 470 ~ 470 (563)
T 1amu_A 470 P 470 (563)
T ss_dssp E
T ss_pred e
Confidence 5
No 14
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=5.1e-71 Score=562.72 Aligned_cols=422 Identities=18% Similarity=0.180 Sum_probs=358.6
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...|++++|+++++++|+++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|+++
T Consensus 25 ~~~tl~~~~~~~a~~~Pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~lailkaGa~~ 104 (620)
T 4dg8_A 25 AHPTVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLLAILLSGHHY 104 (620)
T ss_dssp GSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEcCCCcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+||||..+.+++.++++.+++++++++....... . ... .+.+...
T Consensus 105 vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~-------~---~~~-~~~~~~~------------------------ 149 (620)
T 4dg8_A 105 LYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPA-------N---GLP-CVPVRHL------------------------ 149 (620)
T ss_dssp EECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCC-------T---TSC-EEEGGGC------------------------
T ss_pred EeeCccChHHHHHHHHHhCCCcEEEecCcccccc-------c---CCc-eeeeccC------------------------
Confidence 9999999999999999999999999765432110 0 011 1110000
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMA 251 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 251 (485)
.............++++++++|||||||.||+|+++|+++.+.+.. ...+.+.+++++++..|++|..++..++.++
T Consensus 150 --~~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l 226 (620)
T 4dg8_A 150 --PAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAATLEIWGAL 226 (620)
T ss_dssp --CCCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHHHHHHHHH
T ss_pred --CcCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHHHHHHHHH
Confidence 0000111112345789999999999999999999999999776654 4456789999999999999999998899999
Q ss_pred hhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc-CCee
Q 036361 252 AVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFVV 327 (485)
Q Consensus 252 ~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~i 327 (485)
+.|+++++.+ .+++..+++.++++++|++.++|++++.|.+. ....++++|.+++||++++++..+++. .+ ++++
T Consensus 227 ~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~-~~~~l~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l 305 (620)
T 4dg8_A 227 LNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDL-DPDCLGGLRQLLTGGDILSVPHVRRALLRHPRLHL 305 (620)
T ss_dssp TTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHH-CGGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCEE
T ss_pred hcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhc-ChhhCCCccEEEEEeCcCCHHHHHHHHHhCCCeEE
Confidence 9999999865 58999999999999999999999999999764 345688999999999999998888876 44 8899
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCc-ccCCCceecEEEEecCcccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGES-VKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~-~~~g~~~~Gel~v~~~~~~~gy 406 (485)
++.||+||++.+++.+.... ........++|+|.+++ +++|+|+ ++++ +++| +.|||+|+|+++++||
T Consensus 306 ~n~YG~TE~~~~~~~~~~~~-------~~~~~~~~~iG~p~~~~-~~~i~d~-~~~~~~~~g--~~GEl~i~G~~v~~GY 374 (620)
T 4dg8_A 306 VNGYGPTENTTFTCCHVVTD-------DDLEEDDIPIGKAIAGT-AVLLLDE-HGQEIAEPD--RAGEIVAFGAGLAQGY 374 (620)
T ss_dssp EEEECCGGGCSCSEEEECCT-------GGGGSSSCCCBEECTTE-EEEEECT-TSCBCCSSS--CCEEEEEEETTCCSEE
T ss_pred EeeEchhhhhhheEEEeccc-------cccCCCCCCceecccCc-EEEEECc-cCCCCCCCC--CceEEEEecccccccc
Confidence 99999999987765433211 11122345889999998 9999997 4555 7888 8899999999999999
Q ss_pred cCChhhhcccccCC-------CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 407 FKDKESTRRCISDN-------GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 407 ~~~~~~~~~~~~~~-------~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
+++++.+...|.++ +||+|||+|++++||.|+|+||.||+||++|++|+|.|||++|.+||+|.+|+|++.++
T Consensus 375 ~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~~p~V~~a~Vv~~~~ 454 (620)
T 4dg8_A 375 RNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVRER 454 (620)
T ss_dssp TTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEHHHHHHHHHTSTTEEEEEEEEEEE
T ss_pred CCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCHHHHHHHHHhCCCccEEEEEEEeC
Confidence 99999999998653 79999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCC
Q 036361 480 KFWG 483 (485)
Q Consensus 480 ~~~g 483 (485)
+..+
T Consensus 455 ~~~~ 458 (620)
T 4dg8_A 455 NGVK 458 (620)
T ss_dssp TTEE
T ss_pred CCce
Confidence 6543
No 15
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=5e-70 Score=557.86 Aligned_cols=439 Identities=21% Similarity=0.307 Sum_probs=373.8
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
....+++++|+++++ ||++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 24 ~~~~~l~~~~~~~a~--pd~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA~l~aG~~ 101 (617)
T 3rg2_A 24 WQDLPLTDILTRHAA--SDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVA 101 (617)
T ss_dssp CCCCCTTHHHHTTTT--CCSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHHTCE
T ss_pred CCcCCHHHHHHHhhC--CCCeEEecCCceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHHHhcCeE
Confidence 456899999999987 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcch-----HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHS-----SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFI 165 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 165 (485)
++|++|..+.+++.++++.+++++++++.... +.......... ....+...++...
T Consensus 102 ~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------- 162 (617)
T 3rg2_A 102 PVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHS---SIRVVQLLNDSGE---------------- 162 (617)
T ss_dssp EEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHST---TCCEEEEETCCST----------------
T ss_pred EccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCC---ccceeeecccccc----------------
Confidence 99999999999999999999999999997654 22333333222 2333443332210
Q ss_pred cccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHH
Q 036361 166 DTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWG 245 (485)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~ 245 (485)
..+.+........ ....+..++++++++|||||||.||+|+++|+++...+.+....+++.+++++++.+|++|.+++.
T Consensus 163 ~~~~~~~~~~~~~-~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~ 241 (617)
T 3rg2_A 163 HNLQDAINHPAED-FTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMS 241 (617)
T ss_dssp TBHHHHHHSCCSS-CCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHH
T ss_pred cchhhhhcccccc-cCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhh
Confidence 1111111111111 112335678999999999999999999999999999999988889999999999999999998886
Q ss_pred H--HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEeccCCCChhhhhh
Q 036361 246 Y--TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAGAPPPAPVLSR 319 (485)
Q Consensus 246 ~--~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g~~l~~~~~~~ 319 (485)
. ++.+++.|+++++.+.+++..+++.++++++|++.++|+++..+.+.. ....++++|.+++||+++++++.++
T Consensus 242 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~l~~~~~~~ 321 (617)
T 3rg2_A 242 SPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAAR 321 (617)
T ss_dssp SSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSCCCHHHHHH
T ss_pred HHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCcCCHHHHHH
Confidence 4 789999999999999899999999999999999999999999887543 3346889999999999999999999
Q ss_pred hh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 320 TE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 320 ~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
+. .+++++++.||+||++..++... ........++|.|..+..+++|+|+ +++++++| +.|||+|+
T Consensus 322 ~~~~~~~~~~~~YG~tE~~~~~~~~~----------~~~~~~~~~~G~p~~~~~~~~i~d~-~~~~~p~G--~~GEl~i~ 388 (617)
T 3rg2_A 322 IPAEIGCQLQQVFGMAEGLVNYTRLD----------DSAEKIIHTQGYPMCPDDEVWVADA-EGNPLPQG--EVGRLMTR 388 (617)
T ss_dssp HHHHTCSEEEEEEEETTEEEEECCTT----------SCHHHHHHCCCEESCTTCEEEEECT-TSCBCCTT--CCEEEEEE
T ss_pred HHHHhCCcEEEEeccCcceeecccCC----------CcccccccCCCccCCCCceEEEECC-CCCCCCCC--CceEEEec
Confidence 98 56999999999999975544321 1112334678999743349999995 89999999 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|+++++||+++++.+...|..++||+|||+|++++||.|+|+||.||+||++|++|+|.|||++|.++|+|.+|+|++.+
T Consensus 389 G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~~l~~~p~V~~a~vv~~~ 468 (617)
T 3rg2_A 389 GPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSME 468 (617)
T ss_dssp CSSSCSCCTTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHHHHTTSTTEEEEEEEEEE
T ss_pred CccccchhcCChhhhhhccCCCCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCeeEEEEEecc
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 469 ~~~~~~ 474 (617)
T 3rg2_A 469 DELMGE 474 (617)
T ss_dssp ETTTEE
T ss_pred CcccCe
Confidence 887664
No 16
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=3.8e-71 Score=561.23 Aligned_cols=426 Identities=20% Similarity=0.271 Sum_probs=321.4
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
....+++++|+++++++|+++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++
T Consensus 72 ~~~~~l~~~l~~~a~~~pd~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 151 (570)
T 4gr5_A 72 PAGACVHELFEAQAARAPDAVALLHEADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVALLAVLKAGGG 151 (570)
T ss_dssp CCSCCHHHHHHHHHHHCTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHHTTCE
T ss_pred CccCCHHHHHHHHHHHCCCCeEEECCCCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHHCCE
Confidence 34578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccc
Q 036361 91 LNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEG 170 (485)
Q Consensus 91 ~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (485)
++|++|.++.+++.++++.++++++|++......+ .....+.+.+..
T Consensus 152 ~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-----------~~~~~~~~~~~~---------------------- 198 (570)
T 4gr5_A 152 YTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRL-----------TGTTTLYVEDEA---------------------- 198 (570)
T ss_dssp EEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSS-----------CSSEEEECCC------------------------
T ss_pred EEEcCCCChHHHHHHHHHhcCCCEEEecchhhhcc-----------cCCcceeeeccc----------------------
Confidence 99999999999999999999999999987543221 111111111110
Q ss_pred ccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHH
Q 036361 171 FVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGM 250 (485)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~ 250 (485)
..............++++++++|||||||.||+|+++|+++...+.. ...+.+.+++++++.+|++|..+...++.+
T Consensus 199 --~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~ 275 (570)
T 4gr5_A 199 --ASDAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFGLELFGA 275 (570)
T ss_dssp -------CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHHHHHHHH
T ss_pred --cccccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHHHHHHHH
Confidence 00001111122356789999999999999999999999998765543 334568889999999999988777778899
Q ss_pred HhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhh-cc-CCe
Q 036361 251 AAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GFV 326 (485)
Q Consensus 251 l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~~ 326 (485)
++.|+++++.+ .+++..+++.++++++|++.++|++++.|.+.. ...++++|.+++||++++++..+++. .+ +++
T Consensus 276 l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-~~~~~~lr~~~~gG~~l~~~~~~~~~~~~~~~~ 354 (570)
T 4gr5_A 276 LLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEV-PEAFEGVRYAITGGEPASVPHVAKARRDHPALR 354 (570)
T ss_dssp HTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC-GGGGTTCSEEEEESSCCCHHHHHHHHHHCTTCE
T ss_pred HhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhc-hhhCCCceEEEEecccCCHHHHHHHHHhCCCcE
Confidence 99999999886 478999999999999999999999999998654 34688999999999999999988888 44 899
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++++++.+..... .......++|+|.+++ +++|+|+ +++++++| +.|||+|+|++++.||
T Consensus 355 l~~~YG~TE~~~~~~~~~~~~~-------~~~~~~~~iG~p~~~~-~v~i~d~-~~~~~~~G--~~GEl~v~g~~v~~GY 423 (570)
T 4gr5_A 355 LGNGYGPAESMGFTTHHAVVAG-------DLSGTALPIGVPLAGK-RAYVLDD-DLKPAANG--ALGELYVAGAGLAHGY 423 (570)
T ss_dssp EEEEECCGGGCSCSEEEECCGG-------GTTSSSCCCBEECTTE-EEEEECT-TSCBCCTT--CEEEEEEEETTCCCEE
T ss_pred EEEeechhhheeeeeeeeeccc-------ccCCCccccceeeCCC-EEEEECC-CCCCCCCC--CcEEEEEeecccchhc
Confidence 9999999999877665432111 1111234689999998 9999995 79999999 8999999999999999
Q ss_pred cCChhhhcccccCC--------CeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 407 FKDKESTRRCISDN--------GWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 407 ~~~~~~~~~~~~~~--------~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
+++++.+...|..+ +||+|||+|++|+||+|+|+||.+|+||++|++|+|.|||++|.+||+|.+|+|++.+
T Consensus 424 ~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~p~V~~a~Vv~~~ 503 (570)
T 4gr5_A 424 VSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVEPGEVEARLVGHPAVRQAAVLAQD 503 (570)
T ss_dssp TTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC------------------------------------
T ss_pred CCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeCHHHHHHHHhcCCCcceEEEEEee
Confidence 99999999888543 6999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 504 ~~~~~~ 509 (570)
T 4gr5_A 504 SRLGDK 509 (570)
T ss_dssp ------
T ss_pred CCCCCe
Confidence 887665
No 17
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=1.3e-69 Score=548.77 Aligned_cols=435 Identities=22% Similarity=0.266 Sum_probs=370.8
Q ss_pred chhHHHHHHHhh-----cCCCcEEEeC-----CeeeeHHHHHHHHHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHh
Q 036361 15 TTLGFLERAATA-----YSDCPSIVYN-----NTTYTWSETHRRCLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFG 83 (485)
Q Consensus 15 tl~~~l~~~a~~-----~p~~~a~~~~-----~~~~Ty~~l~~~~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA 83 (485)
++.++|+++++. +|+++|+.+. ++++||+||.++++++|++|.+. |+++||+|+++++|++++++++||
T Consensus 39 ~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~~~~~lA 118 (570)
T 3c5e_A 39 FASDVLDHWADMEKAGKRPPSPALWWVNGKGKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEWWLVILG 118 (570)
T ss_dssp HHHHTHHHHHHHHHTTSSCCCEEEEEECSSSCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhhccccCCCCceEEEEEcCCCceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 457899999998 9999999972 37899999999999999999998 999999999999999999999999
Q ss_pred hhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccc
Q 036361 84 VPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVD 163 (485)
Q Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 163 (485)
|+++|++++|+++.++.+++.++++.++++++|++.+..+.+.+.....+ ....++.+++... .
T Consensus 119 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------------~ 182 (570)
T 3c5e_A 119 CIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVASECP---SLRIKLLVSEKSC-------------D 182 (570)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGGGCT---TCCEEEEESSSCC-------------T
T ss_pred HHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhhcCC---ceeEEEEecccCc-------------c
Confidence 99999999999999999999999999999999999988877766655444 3445555543210 1
Q ss_pred cccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHH--HHHHHHHHhCCCCCCEEEEecchhhH
Q 036361 164 FIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFI--LTANALIDWAVPKQPVYLWTLPMFHA 241 (485)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~--~~~~~~~~~~~~~~~~~~~~~p~~~~ 241 (485)
....++++........ ......++++++++|||||||.||+|+++|+ ++. ..... ..+++.++|++++..|++|.
T Consensus 183 ~~~~~~~~~~~~~~~~-~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~ 259 (570)
T 3c5e_A 183 GWLNFKKLLNEASTTH-HCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWTGLQASDIMWTISDTGWI 259 (570)
T ss_dssp TSEEHHHHHHHSCSCC-CCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTTSCCTTCEEEECCCTTSH
T ss_pred ccccHHHHhhcccccc-cccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhcCCCCCceEEEcCchHHH
Confidence 1122333333222211 1123457899999999999999999999999 444 33333 56778899999999999999
Q ss_pred hHHH-HHHHHHhhcceEeecc--cCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhh
Q 036361 242 NGWG-YTWGMAAVGATNICLR--RFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVL 317 (485)
Q Consensus 242 ~g~~-~~~~~l~~G~~~~~~~--~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~ 317 (485)
.++. .++.++..|+++++.+ .+++..+++.++++++|+++++|++++.|.+.. ....++++|.++++|+++++++.
T Consensus 260 ~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~lr~i~~gGe~l~~~~~ 339 (570)
T 3c5e_A 260 LNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGESLLPETL 339 (570)
T ss_dssp HHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSCTTTCCCTTCCEEEEESSCCCHHHH
T ss_pred HHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhccccccccccceEEEEcCCcCCHHHH
Confidence 9987 4788999999999886 689999999999999999999999999998764 34467899999999999999999
Q ss_pred hhhh-ccCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEE
Q 036361 318 SRTE-SMGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVV 396 (485)
Q Consensus 318 ~~~~-~~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~ 396 (485)
+++. .+++++++.||+||++.+++..... .....++|.|.+++ +++|+|+ +++++++| +.|||+
T Consensus 340 ~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~-----------~~~~~~vG~p~~~~-~v~i~d~-~g~~~~~G--~~GEl~ 404 (570)
T 3c5e_A 340 ENWRAQTGLDIRESYGQTETGLTCMVSKTM-----------KIKPGYMGTAASCY-DVQIIDD-KGNVLPPG--TEGDIG 404 (570)
T ss_dssp HHHHHHHSCCCEEEEEETTTEEEEECCTTS-----------CCCTTCCCEECTTC-CEEEECT-TSCBCCTT--CCEEEE
T ss_pred HHHHHHhCCchhhccchhhcccceecCccc-----------ccCCCcccccCCCc-eEEEECC-CCCCCCCC--CCCeeE
Confidence 9998 4699999999999998665543211 11246899999998 9999996 79999999 889999
Q ss_pred Ee-----cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcce
Q 036361 397 LR-----GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNE 471 (485)
Q Consensus 397 v~-----~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~ 471 (485)
++ |++++.||+++++.+...|. ++||+|||+|++|+||.|+|+||.+|+||++|++|+|.+||++|.++|+|.+
T Consensus 405 v~~~~~~g~~v~~GY~~~~~~t~~~f~-~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~ 483 (570)
T 3c5e_A 405 IRVKPIRPIGIFSGYVDNPDKTAANIR-GDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVENALMEHPAVVE 483 (570)
T ss_dssp EECSSBCCTTCCCEETTCHHHHHHTEE-TTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHHTSTTEEE
T ss_pred EeccCCCCchhhccccCChhHhhhhhc-CCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHHHHHHHHhCCCcce
Confidence 99 99999999999999999997 8999999999999999999999999999999999999999999999999999
Q ss_pred eEEEeccCCCCCC
Q 036361 472 AAVVARPDKFWGE 484 (485)
Q Consensus 472 ~~v~~~~~~~~g~ 484 (485)
|+|++.+++..|+
T Consensus 484 a~Vv~~~~~~~g~ 496 (570)
T 3c5e_A 484 TAVISSPDPVRGE 496 (570)
T ss_dssp EEEEEEEETTTEE
T ss_pred EEEEeeeCCCCCe
Confidence 9999999887765
No 18
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=2.4e-70 Score=549.17 Aligned_cols=428 Identities=17% Similarity=0.161 Sum_probs=363.4
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
|++.++|+++++++|+++|+++.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~~~~G~v~vp 80 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWRDAKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGCVKAGHAYIP 80 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHHHHTTCCEEE
T ss_pred CcHHHHHHHHHHHCCCceEEEeCCceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEe
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++.++.+++.++++.++++++|++...... . ....++..+ .+.....
T Consensus 81 l~~~~~~~~l~~il~~~~~~~~i~~~~~~~~------~-----~~~~~~~~~---------------------~~~~~~~ 128 (512)
T 3fce_A 81 VDLSIPADRVQRIAENSGAKLLLSATAVTVT------D-----LPVRIVSED---------------------NLKDIFF 128 (512)
T ss_dssp EETTSCHHHHHHHHHHSCCCEEEESSCCCSS------C-----CSSEEEETH---------------------HHHHHHH
T ss_pred eCCCCcHHHHHHHHHhcCCCEEEecCccccc------c-----cccceechh---------------------hhhhhcc
Confidence 9999999999999999999999997532110 0 001111110 0011111
Q ss_pred -cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 174 -EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 174 -~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
.............++++++++|||||||.||+|+++|+++...+.+....+++.++|++++.+|++|..++..++.+++
T Consensus 129 ~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~ 208 (512)
T 3fce_A 129 THKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVMDIYPSLV 208 (512)
T ss_dssp HTTTCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHHHHHHHHH
T ss_pred cccccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHHHHHHHHh
Confidence 1111111223456789999999999999999999999999999998888899999999999999999999888899999
Q ss_pred hcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc-CC
Q 036361 253 VGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GF 325 (485)
Q Consensus 253 ~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~ 325 (485)
.|+++++.+. +++..+++.++++++|++.++|++++.++... ....++++|.++++|+++++++.+++. .+ ++
T Consensus 209 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~~~~ 288 (512)
T 3fce_A 209 TGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEVLPNEVARKLIERFPKA 288 (512)
T ss_dssp TTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSCCCHHHHHHHHHHCTTC
T ss_pred CCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCcCCHHHHHHHHHHCCCC
Confidence 9999999885 79999999999999999999999999998765 445688999999999999999999998 55 89
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 405 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~g 405 (485)
++++.||+||+++.++..... ..........++|.|.+++ +++|+|+ +++++++| +.|||+++||+++.|
T Consensus 289 ~i~~~YG~TE~~~~~~~~~~~------~~~~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~GEl~v~g~~v~~G 358 (512)
T 3fce_A 289 TIMNTYGPTEATVAVTGIHVT------EEVLDQYKSLPVGYCKSDC-RLLIMKE-DGTIAPDG--EKGEIVIVGPSVSVG 358 (512)
T ss_dssp EEEEEECCGGGSSCSEEEECC------HHHHHHCSSCCCEEECTTC-EEEEECS-SSCBCCTT--SCEEEEEESTTSCSC
T ss_pred EEEeCcccChhhhheeeEEec------cccccccCCCccccccCCc-EEEEECC-CCCCCCCC--CeEEEEEeccccChh
Confidence 999999999998776654311 1111222446789999998 9999995 89999999 889999999999999
Q ss_pred ccCChhhhccccc---CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCC
Q 036361 406 YFKDKESTRRCIS---DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFW 482 (485)
Q Consensus 406 y~~~~~~~~~~~~---~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~ 482 (485)
|+++++.+...|. .++||+|||+|++ +||+++++||.+|+||++|++|+|.+||++|.++|+|.+|+|++.+++..
T Consensus 359 Y~~~~~~t~~~f~~~~~~~~~~TGDlg~~-~dG~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~ 437 (512)
T 3fce_A 359 YLGSPELTEKAFTMIDGERAYKTGDAGYV-ENGLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEGAVIVPIKKGEK 437 (512)
T ss_dssp BTTCHHHHHHHEEEETTEEEEEEEEEEEE-ETTEEEEEEEGGGCEEETTEEECHHHHHHHHHHSTTEEEEEEEEEEETTE
T ss_pred hcCCchhhhhccccCCCCEEEeCCceEEe-cCCEEEEecccCCEEEECCEEECHHHHHHHHHhCCCcceEEEEEEecCCC
Confidence 9999999998873 3569999999999 79999999999999999999999999999999999999999999988765
Q ss_pred CC
Q 036361 483 GE 484 (485)
Q Consensus 483 g~ 484 (485)
|+
T Consensus 438 ~~ 439 (512)
T 3fce_A 438 YD 439 (512)
T ss_dssp EE
T ss_pred ce
Confidence 54
No 19
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=1.4e-69 Score=556.92 Aligned_cols=450 Identities=22% Similarity=0.320 Sum_probs=372.1
Q ss_pred chhHHHHHHHhhcCCCcEEEe------CCeeeeHHHHHHHHHHHHHHHH-HcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 15 TTLGFLERAATAYSDCPSIVY------NNTTYTWSETHRRCLQVASSLS-SVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~------~~~~~Ty~~l~~~~~~lA~~L~-~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
+++++|+++++.+|+++|+++ ..+++||+||.++++++|+.|+ ++|+++||+|+++++|++++++++|||+++
T Consensus 83 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA~~~~ 162 (663)
T 1ry2_A 83 ACYNCVDRHALKTPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLAISRI 162 (663)
T ss_dssp HHHHHTHHHHTTCTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 567899999999999999998 3478999999999999999999 899999999999999999999999999999
Q ss_pred CceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch---------HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCC
Q 036361 88 GAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS---------SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSP 158 (485)
Q Consensus 88 G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 158 (485)
|++++|+++..+.+++.++++.++++++|++.... +.+.++....+ ....+++++........ ..
T Consensus 163 Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~vi~~~~~~~~~~~--~~- 236 (663)
T 1ry2_A 163 GAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETP---GVRHVLVYRKTNNPSVA--FH- 236 (663)
T ss_dssp TCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCT---TCCEEEEECSSCCSSCC--CC-
T ss_pred CCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCC---CCceEEEEecCCCCccc--cC-
Confidence 99999999999999999999999999999987643 23334433322 34566666543210000 00
Q ss_pred ccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHH-HHHHhCCCCCCEEEEecc
Q 036361 159 TVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTAN-ALIDWAVPKQPVYLWTLP 237 (485)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~-~~~~~~~~~~~~~~~~~p 237 (485)
......|.++....... ....+..++++++|+|||||||.||+|+++|+++..++.. ....+.+.++|++++..|
T Consensus 237 ---~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 312 (663)
T 1ry2_A 237 ---APRDLDWATEKKKYKTY-YPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFTAGD 312 (663)
T ss_dssp ---SSSEEEHHHHHTTSCSC-CCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEECSC
T ss_pred ---CCccccHHHHHhhcCCC-CCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEEcCC
Confidence 01112333433322211 1122346789999999999999999999999998876643 445678999999999999
Q ss_pred hhhHhHHH-HHHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEec
Q 036361 238 MFHANGWG-YTWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTA 308 (485)
Q Consensus 238 ~~~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~ 308 (485)
++|..+.. .++.+++.|+++++.+. +++..+++.|+++++|+++++|++++.|.+.. +..+++++|.++++
T Consensus 313 ~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~~~l~sLr~i~~g 392 (663)
T 1ry2_A 313 IGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDSYIENHSLKSLRCLGSV 392 (663)
T ss_dssp TTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTTSSSSCCCTTCCEEEEC
T ss_pred cHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCccccccCCcCceEEEEEE
Confidence 99999984 47899999999999864 58999999999999999999999999998765 24568999999999
Q ss_pred cCCCChhhhhhhh-ccC---CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCc
Q 036361 309 GAPPPAPVLSRTE-SMG---FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGES 384 (485)
Q Consensus 309 g~~l~~~~~~~~~-~~~---~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~ 384 (485)
|+++++++++++. .++ +++++.||+||+++.++....... . ....+++|.|.+++ +++|+|+++|++
T Consensus 393 Ge~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~-~-------~~~~gs~G~p~~g~-~v~i~d~~~g~~ 463 (663)
T 1ry2_A 393 GEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGSHLVTPLAGGV-T-------PMKPGSASFPFFGI-DAVVLDPNTGEE 463 (663)
T ss_dssp SSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCSCSEECCTTTC-C-------CCCTTCCCEECTTC-CEEEECSSSTTC
T ss_pred cCCCCHHHHHHHHHHhCCCCceEEEeECCccccCeeeccCCCCC-c-------ccCCCccccCcCCC-eEEEEcCCCCCc
Confidence 9999999999998 566 899999999999876665432110 0 12346899999999 999999768999
Q ss_pred ccC-CCceecEEEEec--CcccccccCChhhhcccccC--CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHH
Q 036361 385 VKR-DGVSLGEVVLRG--GCVTVGYFKDKESTRRCISD--NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEV 459 (485)
Q Consensus 385 ~~~-g~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~~--~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~i 459 (485)
+++ | +.|||+++| |+++.||+++++.+...+.. +|||+|||+|++|+||+++|+||.||+||++|++|++.||
T Consensus 464 v~~~g--~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eI 541 (663)
T 1ry2_A 464 LNTSH--AEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGYYFTGDGAAKDKDGYIWILGRVDDVVNVSGHRLSTAEI 541 (663)
T ss_dssp EECSS--CEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTSEEEEEEEEECTTCCEEECSCTTSCBCSSSCCBCHHHH
T ss_pred CCCCC--cceEEEEecCCCchhcccccChHHHHHhhhcCCCCEEEcCCEEEEcCCCCEEEEeecCCEEEECCEEcCHHHH
Confidence 988 7 789999999 58999999999988776643 7899999999999999999999999999999999999999
Q ss_pred HHHHhcCcCcceeEEEeccCCCCCCC
Q 036361 460 ESVLYSNTAVNEAAVVARPDKFWGET 485 (485)
Q Consensus 460 e~~l~~~~~v~~~~v~~~~~~~~g~~ 485 (485)
|++|.+||+|.+|+|++.+++..||.
T Consensus 542 E~~l~~~p~V~ea~Vvg~~~~~~g~~ 567 (663)
T 1ry2_A 542 EAAIIEDPIVAECAVVGFNDDLTGQA 567 (663)
T ss_dssp HHHHHSSTTEEEEEEECCCCCTTSCC
T ss_pred HHHHHhCCCcceEEEEEEecCCCCeE
Confidence 99999999999999999999888763
No 20
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=8.1e-70 Score=558.53 Aligned_cols=448 Identities=22% Similarity=0.294 Sum_probs=370.3
Q ss_pred chhHHHHHHHhhcCCCcEEEe------CCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC
Q 036361 15 TTLGFLERAATAYSDCPSIVY------NNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG 88 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~------~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G 88 (485)
+++++|+++++.+|+++|+++ ..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|
T Consensus 77 ~~~~~l~~~a~~~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~~~~G 156 (652)
T 1pg4_A 77 LAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIG 156 (652)
T ss_dssp HHHHHTGGGHHHHTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHcC
Confidence 467889999999999999997 23789999999999999999999999999999999999999999999999999
Q ss_pred ceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch---------HHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCc
Q 036361 89 AILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS---------SLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 89 ~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~---------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 159 (485)
++++|+++..+.+++.++++.++++++|++.... +.+.++...... .....+++++........
T Consensus 157 av~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vi~~~~~~~~~~~------ 229 (652)
T 1pg4_A 157 AVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNV-TSVEHVIVLKRTGSDIDW------ 229 (652)
T ss_dssp CEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTC-CSCCEEEEECSSCCCCCC------
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCc-CCCCEEEEEeCCCCcccc------
Confidence 9999999999999999999999999999987542 233344332210 123556666532210000
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHH-HHHHHhCCCCCCEEEEecch
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTA-NALIDWAVPKQPVYLWTLPM 238 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~ 238 (485)
.......|+++....... ....+..++++++|+|||||||.||+|+++|++++.++. .....+++.++|++++..|+
T Consensus 230 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 307 (652)
T 1pg4_A 230 -QEGRDLWWRDLIEKASPE-HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADV 307 (652)
T ss_dssp -CBTTEEEHHHHHTTSCSC-CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCT
T ss_pred -cCCCceeHHHHHhhcCCC-CCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEEccCC
Confidence 001112344444332221 112234578999999999999999999999999887664 34556789999999999999
Q ss_pred hhHhHHH-HHHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC----CCCCCCCCceEEecc
Q 036361 239 FHANGWG-YTWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP----DFEPLKTPVQILTAG 309 (485)
Q Consensus 239 ~~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----~~~~l~~lr~i~~~g 309 (485)
+|..++. .++.+++.|+++++.+. +++..+++.++++++|+++++|++++.|.+.. ...+++++|.++++|
T Consensus 308 ~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gG 387 (652)
T 1pg4_A 308 GWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVG 387 (652)
T ss_dssp TSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEES
T ss_pred eeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEec
Confidence 9999984 57899999999999874 58999999999999999999999999998764 345689999999999
Q ss_pred CCCChhhhhhhh-ccC---CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcc
Q 036361 310 APPPAPVLSRTE-SMG---FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESV 385 (485)
Q Consensus 310 ~~l~~~~~~~~~-~~~---~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~ 385 (485)
+++++++.+++. .++ +++++.||+||+++.++...... .....+++|+|.+++ +++|+|+ +++++
T Consensus 388 e~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~s~G~p~~g~-~v~i~d~-~g~~v 456 (652)
T 1pg4_A 388 EPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGA---------IELKAGSATRPFFGV-QPALVDN-EGHPQ 456 (652)
T ss_dssp SCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSSCSBCCCTTT---------CCBCTTCCBSBCTTC-CEEEECT-TCCBC
T ss_pred CCCCHHHHHHHHHHhCCCCCcEEccccCcccccceecCCCCC---------cCccCCccccCcCCC-eEEEECC-CCCCc
Confidence 999999999998 566 89999999999987665432111 012346899999999 9999996 79999
Q ss_pred cCCCceecEEEEec--CcccccccCChhhhccccc--CCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHH
Q 036361 386 KRDGVSLGEVVLRG--GCVTVGYFKDKESTRRCIS--DNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVES 461 (485)
Q Consensus 386 ~~g~~~~Gel~v~~--~~~~~gy~~~~~~~~~~~~--~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~ 461 (485)
+.| +.|||+|+| |+++.||+++++.+...+. .+|||+|||+|++|+||+|+|+||.||+||++|++|++.|||+
T Consensus 457 ~~g--~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~~G~rI~~~eIE~ 534 (652)
T 1pg4_A 457 EGA--TEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIES 534 (652)
T ss_dssp CSS--EEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHH
T ss_pred CCC--ceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEECCcEEEEcCCCcEEEEecCCCEEEECCEEECHHHHHH
Confidence 998 899999999 7999999999988776653 2789999999999999999999999999999999999999999
Q ss_pred HHhcCcCcceeEEEeccCCCCCC
Q 036361 462 VLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 462 ~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
+|.+||+|.+|+|++.+++..||
T Consensus 535 ~l~~~p~V~ea~Vvg~~~~~~g~ 557 (652)
T 1pg4_A 535 ALVAHPKIAEAAVVGIPHAIKGQ 557 (652)
T ss_dssp HHHHSTTEEEEEEEEEEETTTEE
T ss_pred HHHhCCCcceEEEEEEEcCCCCe
Confidence 99999999999999999987775
No 21
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.4e-70 Score=546.82 Aligned_cols=438 Identities=23% Similarity=0.337 Sum_probs=357.6
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEe
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNN 93 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~ 93 (485)
+|+.++|+++++++|+++|+++.++++||+||.++++++|++|++. +||+|+++++|++++++++|||+++|++++|
T Consensus 1 mtl~~~l~~~a~~~pd~~Al~~~~~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~~~Gav~vp 77 (501)
T 3ipl_A 1 MSLDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACWLANIEIAM 77 (501)
T ss_dssp --CCCHHHHHHHHHTTSEEEECSSCEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHHhcCCceEEEeCCcEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEe
Confidence 5788999999999999999999999999999999999999999986 8999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 94 INTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 94 l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
+++.++.+++.++++.++++++|++.+.......... .. ....+.............. ........+....
T Consensus 78 l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 148 (501)
T 3ipl_A 78 INTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVS-LD---DIEFAGRDITTNGLLDNTM-----GIQYDTSNETVVP 148 (501)
T ss_dssp CCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEE-TT---C------------------------------------
T ss_pred cCccCCHHHHHHHHHhcCCCEEEEccccccccccccc-cc---cceeeeeeccccccccccc-----ccccccchhhccc
Confidence 9999999999999999999999998765433211100 00 0000000000000000000 0000000011111
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhh
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAV 253 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~ 253 (485)
.............++++++++|||||||.||+|+++|+++...+......+++.+++++++.+|++|.+++..++.++..
T Consensus 149 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~ 228 (501)
T 3ipl_A 149 KESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLSVLLRAVIE 228 (501)
T ss_dssp -CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHHHHHHHHHH
T ss_pred cCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHHHHHHHHHc
Confidence 11111111233567899999999999999999999999999999988888999999999999999999999888999999
Q ss_pred cceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCC
Q 036361 254 GATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGL 333 (485)
Q Consensus 254 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~ 333 (485)
|+++++.+.+++..+++.++++++|++.++|++++.|.+....... ++|.+++||+++++++.+++.++++++++.||+
T Consensus 229 G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~-~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~YG~ 307 (501)
T 3ipl_A 229 GFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPY-NLQKILLGGAKLSATMIETALQYNLPIYNSFGM 307 (501)
T ss_dssp TCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCT-TCCEEEECSSCCCHHHHHHHHHTTCCEEEEEEE
T ss_pred CceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcC-cccEEEEeCCCCCHHHHHHHHHhCCCEeccccc
Confidence 9999999999999999999999999999999999999876533333 899999999999999999999889999999999
Q ss_pred ccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhh
Q 036361 334 TETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEST 413 (485)
Q Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~ 413 (485)
||+++.++.+. .........++|.|.+++ +++|+|++ ++ +.|||+++|++++.||+++++.+
T Consensus 308 TE~~~~~~~~~---------~~~~~~~~~~~G~p~~~~-~~~i~d~~------~~--~~GEl~v~g~~~~~gY~~~~~~t 369 (501)
T 3ipl_A 308 TETCSQFLTAT---------PEMLHARPDTVGMPSANV-DVKIKNPN------KE--GHGELMIKGANVMNGYLYPTDLT 369 (501)
T ss_dssp GGGTEEEEEEC---------HHHHHHCTTCCBEECTTC-EEEEESCC------SS--CCEEEEEESTTSCSCCSBSTTCC
T ss_pred cccccceeecC---------ccccccCCCCCCCCCCCc-EEEEecCC------CC--CccEEEEeccchhhhhCcChhhc
Confidence 99987655432 233334567899999998 99999974 33 66999999999999999999988
Q ss_pred cccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 414 RRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.. |. +|||+|||+|++++||+++++||.+|+||++|++|+|.+||++|.+||+|.+|+|++.+++.+|+
T Consensus 370 ~~-~~-~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~l~~~p~V~~~~vv~~~~~~~g~ 438 (501)
T 3ipl_A 370 GT-FE-NGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQ 438 (501)
T ss_dssp CS-EE-TTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHHHHHHHTTSTTEEEEEEEEEEETTTEE
T ss_pred ch-hc-CCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHHHHHHHHhCCCccEEEEEEEecccCCc
Confidence 87 55 89999999999999999999999999999999999999999999999999999999999988775
No 22
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=9.7e-70 Score=544.34 Aligned_cols=427 Identities=18% Similarity=0.210 Sum_probs=365.6
Q ss_pred cchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEE
Q 036361 14 LTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILN 92 (485)
Q Consensus 14 ~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v 92 (485)
+++.++|+++|+++|+++|+.+.++++||+||.++++++|++|.+ .|.++|++|+++++|++++++++|||+++|++++
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~~~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA~~~~G~~~v 80 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQGQSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLGSVKAGHPYI 80 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHHHHHHTCCEE
T ss_pred CcHHHHHHHHHHHCCCCeEEEcCCceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHHHHHhCCEEE
Confidence 578999999999999999999999999999999999999999998 4889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcccccccccccccc
Q 036361 93 NINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFV 172 (485)
Q Consensus 93 ~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (485)
|+++.++.+++.++++.++++++|++...... ... .....+ .+.++.
T Consensus 81 pl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~------~~~---~~~~~~------------------------~~~~~~ 127 (511)
T 3e7w_A 81 PVDLSIPSERIAKIIESSGAELLIHAAGLSID------AVG---QQIQTV------------------------SAEELL 127 (511)
T ss_dssp EEETTSCHHHHHHHHHHHTCCEEEESSSCCTT------CCC---CSSCEE------------------------EHHHHH
T ss_pred ecCCCChHHHHHHHHHhCCCCEEEecccccch------hcc---ccccee------------------------cHhhhh
Confidence 99999999999999999999999997543210 000 001111 111112
Q ss_pred ccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHh
Q 036361 173 EEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAA 252 (485)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~ 252 (485)
..............++++++++|||||||.||+|+++|+++...+.+....+++.+++++++.+|++|..++..++.++.
T Consensus 128 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~ 207 (511)
T 3e7w_A 128 ENEGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSVMDLYPCLQ 207 (511)
T ss_dssp TSCSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHHHHHHHHHH
T ss_pred ccccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHHHHHHHHHh
Confidence 11111122223356789999999999999999999999999999998888899999999999999999999888899999
Q ss_pred hcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc-CC
Q 036361 253 VGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM-GF 325 (485)
Q Consensus 253 ~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~-~~ 325 (485)
.|+++++.+. +++..+++.++++++|++.++|+++..++... ....++++|.++++|+++++++.+++. .+ ++
T Consensus 208 ~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~~~~ 287 (511)
T 3e7w_A 208 SGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEVLPVSVAKALLERFPKA 287 (511)
T ss_dssp TTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHCTTC
T ss_pred cCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCCCCHHHHHHHHHHCCCc
Confidence 9999999875 68999999999999999999999999998876 345678999999999999999999998 55 89
Q ss_pred eeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccc
Q 036361 326 VVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVG 405 (485)
Q Consensus 326 ~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~g 405 (485)
++++.||+||+++.++.+.... .........++|.|.+++ +++|+|+ +++++++| +.|||+++|++++.|
T Consensus 288 ~i~~~YG~TE~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~-~~~i~d~-~g~~~~~g--~~GEl~v~g~~v~~G 357 (511)
T 3e7w_A 288 KIFNTYGPTEATVAVTSVEITN------DVISRSESLPVGFAKPDM-NIFIMDE-EGQPLPEG--EKGEIVIAGPSVSRG 357 (511)
T ss_dssp EEEECCCCGGGSSCSEEEEECH------HHHTTCSSCCCBEECTTC-EEEEECT-TSCBCCTT--CCEEEEEESTTSCCC
T ss_pred EEEeCcccchheeeeeEEeccc------cccccCCcCCCcceeCCC-EEEEECC-CCCCCCCC--CceEEEEecCccChh
Confidence 9999999999987766543111 011112235689999998 9999996 69999999 889999999999999
Q ss_pred ccCChhhhcccccC-CC--eeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCC
Q 036361 406 YFKDKESTRRCISD-NG--WFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFW 482 (485)
Q Consensus 406 y~~~~~~~~~~~~~-~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~ 482 (485)
|+++++.+...|.. ++ ||+|||+|++ +||.++++||.+|+||++|++|+|.+||++|.++|+|.+|+|++.+++..
T Consensus 358 Y~~~~~~t~~~f~~~~g~~~~~TGDlg~~-~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~~~~ 436 (511)
T 3e7w_A 358 YLGEPELTEKAFFSHEGQWAYRTGDAGFI-QDGQIFCQGRLDFQIKLHGYRMELEEIEFHVRQSQYVRSAVVIPYQPNGT 436 (511)
T ss_dssp BTTCHHHHHHHEEESSSSEEEEEEEEEEE-ETTEEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEEEEEEEECSSSS
T ss_pred hCCCcccchhhhcCCCCCEEEeCCCeEEc-cCCeEEEEccccCEEEECCEEeCHHHHHHHHHhCCCcceEEEEEEcCCCC
Confidence 99999999988842 33 7999999999 59999999999999999999999999999999999999999999998877
Q ss_pred CC
Q 036361 483 GE 484 (485)
Q Consensus 483 g~ 484 (485)
|+
T Consensus 437 ~~ 438 (511)
T 3e7w_A 437 VE 438 (511)
T ss_dssp CC
T ss_pred ce
Confidence 65
No 23
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1e-69 Score=583.46 Aligned_cols=450 Identities=23% Similarity=0.342 Sum_probs=345.1
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeC--CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYN--NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~--~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
...|++++|+++++++|+++|+++. ++++||+||.++++++|++|++.|+++||+|+|+++|++++++++|||+++|+
T Consensus 59 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga 138 (979)
T 3tsy_A 59 NHLSLHDYIFQNISEFATKPCLINGPTGHVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGA 138 (979)
T ss_dssp TTSCHHHHHTTTGGGTTTSEEEEETTTCCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEECCCCcEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCC
Confidence 3579999999999999999999986 68999999999999999999999999999999999999999999999999999
Q ss_pred eEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccc
Q 036361 90 ILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYE 169 (485)
Q Consensus 90 ~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (485)
+++|++|.++.+++.++++.++++++|++....+.+....... ...++.+++...... ......+.
T Consensus 139 ~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---------~~~~~~~~ 204 (979)
T 3tsy_A 139 TATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD-----GVVIVCIDDNESVPI---------PEGCLRFT 204 (979)
T ss_dssp EEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS-----CCEEEECCCCTTSCC---------CTTEEEGG
T ss_pred EEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC-----CceEEEeCCcccccC---------CcccccHH
Confidence 9999999999999999999999999999988777665554332 233444443211100 01122333
Q ss_pred cccccCCCC--CCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHhH
Q 036361 170 GFVEEGDPK--YKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHANG 243 (485)
Q Consensus 170 ~~~~~~~~~--~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g 243 (485)
++....... .....+..++++++++|||||||.||+|+++|+++...+..... .+.+.+++++++.+|++|.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~ 284 (979)
T 3tsy_A 205 ELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYA 284 (979)
T ss_dssp GTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEEEECSCSSSHHH
T ss_pred HHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEEEEECchHHHHH
Confidence 333322221 11223456789999999999999999999999999988766554 345788999999999999999
Q ss_pred HHH-HHHHHhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhh
Q 036361 244 WGY-TWGMAAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 244 ~~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
+.. ++.++..|+++++.+.+++..+++.++++++|++.++|+++..|.+.. ....++++|.+++||+++++++.+++
T Consensus 285 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gg~~l~~~~~~~~ 364 (979)
T 3tsy_A 285 LNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETEKYDLSSIRVVKSGAAPLGKELEDAV 364 (979)
T ss_dssp HHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGGTSCCTTCCEEEESSCCCCSSHHHHH
T ss_pred HHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCccccCCCccceEEEEEcCCCCCHHHHHHH
Confidence 865 688899999999999999999999999999999999999999998775 34568899999999999999999999
Q ss_pred h-cc-CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEe
Q 036361 321 E-SM-GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLR 398 (485)
Q Consensus 321 ~-~~-~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~ 398 (485)
. .+ ++++++.||+||++++++.+...... .......++|.|.+++ +++|+|+++++++++| +.|||+|+
T Consensus 365 ~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~------~~~~~~~~~G~p~~~~-~~~i~d~~~~~~~~~g--~~GEl~i~ 435 (979)
T 3tsy_A 365 NAKFPNAKLGQGYGMTEAGPVLAMSLGFAKE------PFPVKSGACGTVVRNA-EMKIVDPDTGDSLSRN--QPGEICIR 435 (979)
T ss_dssp HHHCTTCEEEECEECGGGCSEEEECGGGSSS------CCCCCTTCCCEECSSC-EEEEECTTSCCBCCTT--CCEEEEEE
T ss_pred HHHCCCCeEEeeechhhhhHHHHhCCCCCCC------ccccCCCCcCcccCCc-EEEEEeCCCCCCCCCC--CccEEEEE
Confidence 8 55 89999999999998776554211110 0012246889999998 9999998889999999 88999999
Q ss_pred cCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEecc
Q 036361 399 GGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARP 478 (485)
Q Consensus 399 ~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~ 478 (485)
|++++.||+++++.+...|..++||+|||+|++++||.|+|+||.+|+||++|++|+|.|||++|.++|+|.+++|++.+
T Consensus 436 g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~p~V~~~~Vv~~~ 515 (979)
T 3tsy_A 436 GHQIMKGYLNNPAATAETIDKDGWLHTGDIGLIDDDDELFIVDRLKELIKYKGFQVAPAELEALLIGHPDITDVAVVAMK 515 (979)
T ss_dssp STTSCSEETTCHHHHHHHBCTTSCEEEEEEEEECTTSCEEEEEESCC---------------------------------
T ss_pred CCCccccccCChhhhhhhccCCCcEEcCCEEEEcCCceEEEecCCCCEEEECCEEECHHHHHHHHHhCCCcceEEEEEec
Confidence 99999999999999999998899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 036361 479 DKFWGE 484 (485)
Q Consensus 479 ~~~~g~ 484 (485)
++..|+
T Consensus 516 ~~~~g~ 521 (979)
T 3tsy_A 516 EEAAGE 521 (979)
T ss_dssp ------
T ss_pred ccCCCc
Confidence 987776
No 24
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=2.5e-69 Score=543.26 Aligned_cols=428 Identities=19% Similarity=0.196 Sum_probs=356.2
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...++.++|+++++++|+++|+.+.++++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~~l~~~l~~~a~~~p~~~a~~~~~~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA~~~~G~v~ 81 (521)
T 3l8c_A 2 SLKDMIDSIEQFAQTQADFPVYDCLGERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAY 81 (521)
T ss_dssp CCCCHHHHHHHHHHHSTTSEEEEETTEEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHHHHHTTCCE
T ss_pred cHHHHHHHHHHHHHHCCCCcceecCCCeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+|+++..+.+++.++++.++++++|++.+....+ ....++.+.+. ...
T Consensus 82 vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~-----------~~~~~~~~~~~---------------------~~~ 129 (521)
T 3l8c_A 82 IPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTI-----------EGISLVSLSEI---------------------ESA 129 (521)
T ss_dssp EEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCC-----------TTSEEEEHHHH---------------------HHH
T ss_pred EecCccccHHHHHHHHHhCCCCEEEecCcccccc-----------ccCcccchhhh---------------------hhc
Confidence 9999999999999999999999999987543211 01111111110 000
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH--hCCCCCCEEEEecchhhHhHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID--WAVPKQPVYLWTLPMFHANGWGYTWG 249 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~--~~~~~~~~~~~~~p~~~~~g~~~~~~ 249 (485)
..... .........++++++++|||||||.||+|+++|+++...+.+.... +....++++++..|++|..++..++.
T Consensus 130 ~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 208 (521)
T 3l8c_A 130 KLAEM-PYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMYWAP 208 (521)
T ss_dssp HHHTC-CCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGHHHHHH
T ss_pred ccccC-CcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHHHHHHH
Confidence 00001 1111233567899999999999999999999999999877776655 67788999999999999999888889
Q ss_pred HHhhcceEeecccC---CHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCCCCCCCceEEeccCCCChhhhhhhh-cc
Q 036361 250 MAAVGATNICLRRF---DASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFEPLKTPVQILTAGAPPPAPVLSRTE-SM 323 (485)
Q Consensus 250 ~l~~G~~~~~~~~~---~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~ 323 (485)
++..|+++++.+.+ ++..+++.+.++++|++.++|+++..+.... ....++++|.++++|+++++++.+++. .+
T Consensus 209 ~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~ 288 (521)
T 3l8c_A 209 TLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERF 288 (521)
T ss_dssp HHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSCCCHHHHHHHHHHC
T ss_pred HHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEecccCCHHHHHHHHHHC
Confidence 99999999998754 8999999999999999999999999988765 345678999999999999999999988 55
Q ss_pred -CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcc
Q 036361 324 -GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCV 402 (485)
Q Consensus 324 -~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~ 402 (485)
++++++.||+||++++++.+.... .........++|+|.+++ +++|+|+ +++++++| +.|||+++||++
T Consensus 289 ~~~~i~~~YG~TE~~~~~~~~~~~~------~~~~~~~~~~vG~p~~~~-~~~i~d~-~g~~~~~g--~~GEl~v~g~~v 358 (521)
T 3l8c_A 289 PSAKIINAYGPTEATVALSAIEITR------EMVDNYTRLPIGYPKPDS-PTYIIDE-DGKELSSG--EQGEIIVTGPAV 358 (521)
T ss_dssp TTCEEEEEECCGGGSSCSEEEEECH------HHHHHCSSCEEEEECTTS-CEEEECT-TSCBCCTT--CCEEEEEESTTS
T ss_pred CCceEEeCcCccHHhhhhceeeccc------ccccCCCccccccccCCC-EEEEECC-CcCCCCCC--CceEEEeccccc
Confidence 899999999999987766543111 111122345799999998 9999996 79999999 889999999999
Q ss_pred cccccCChhhhcccc---cCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccC
Q 036361 403 TVGYFKDKESTRRCI---SDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPD 479 (485)
Q Consensus 403 ~~gy~~~~~~~~~~~---~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~ 479 (485)
+.||+++++.+...| ..++||+|||+|++|+||.+++.||.+|+||++|++|+|.+||++|.++|+|.+|+|++.++
T Consensus 359 ~~GY~~~~~~t~~~f~~~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~a~vv~~~~ 438 (521)
T 3l8c_A 359 SKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELEDVSQQLNQSPMVASAVAVPRYN 438 (521)
T ss_dssp CSCBTTCHHHHHHHEEEETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHHHHHHHHTSTTEEEEEEECCCS
T ss_pred ChhhcCCchHhhccCcCCCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHHHHHHHHcCCCcceEEEEEeec
Confidence 999999999999887 34679999999999999999999999999999999999999999999999999999999876
Q ss_pred CCC
Q 036361 480 KFW 482 (485)
Q Consensus 480 ~~~ 482 (485)
+..
T Consensus 439 ~~~ 441 (521)
T 3l8c_A 439 KEH 441 (521)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 25
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=7e-69 Score=540.70 Aligned_cols=436 Identities=22% Similarity=0.288 Sum_probs=355.0
Q ss_pred chhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEec
Q 036361 15 TTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI 94 (485)
Q Consensus 15 tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l 94 (485)
++.++|+++++ +|+++|+++.++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++|++++|+
T Consensus 25 ~~~~~l~~~~~-~p~~~A~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~vpl 103 (529)
T 2v7b_A 25 FAAYLFRLNET-RAGKTAYIDDTGSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVA 103 (529)
T ss_dssp HHHHHHHHTGG-GTTSEEEECSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHhhhc-cCCceEEEeCCCCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCceEEec
Confidence 47889999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCC-CeEEEecCCcccccCccCCCccccccccccccccc
Q 036361 95 NTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKR-PHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGFVE 173 (485)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (485)
++.++.+++.++++.++++++|++.+..+.+.+...... .. ..++..+...... .....++++..
T Consensus 104 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ 169 (529)
T 2v7b_A 104 NTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESAE---HDGCQLIVSQPRESEP-----------RLAPLFEELID 169 (529)
T ss_dssp CTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC------CCEEEEECC-----------------CCCBHHHHHH
T ss_pred CcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhcc---ccCceEEEeccccccc-----------ccccchhhhhc
Confidence 999999999999999999999999887776665543322 22 3444433321000 00112333332
Q ss_pred cCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHH-HHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHHH
Q 036361 174 EGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGI-FILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGMA 251 (485)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~l 251 (485)
..... .......++++++++|||||||.||+|+++|+++ ..........+++.++|++++..|++|.+++.. ++.++
T Consensus 170 ~~~~~-~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l 248 (529)
T 2v7b_A 170 AAAPA-AKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGLTFPL 248 (529)
T ss_dssp TSCCC-SSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHTHHHH
T ss_pred cCCCc-ccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHHHHHH
Confidence 21111 1122356789999999999999999999999998 444444444567889999999999999999865 67788
Q ss_pred hhcceEeec-ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCC--CCCCceEEeccCCCChhhhhhhh-ccCCee
Q 036361 252 AVGATNICL-RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEP--LKTPVQILTAGAPPPAPVLSRTE-SMGFVV 327 (485)
Q Consensus 252 ~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i 327 (485)
..|+++++. +.+++..+++.++++++|+++++|+++..+++...... ..++|.+++||+++++++.++++ .+++++
T Consensus 249 ~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i 328 (529)
T 2v7b_A 249 SVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLPARADVAIRICTSAGEALPREIGERFTAHFGCEI 328 (529)
T ss_dssp HHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCCCGGGCCCCEEEECSSCCCHHHHHHHHHHHSCCE
T ss_pred hcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccccccCCceEEEEEcCCCCCHHHHHHHHHHhCCce
Confidence 999999987 57899999999999999999999999999987653221 34899999999999999999998 469999
Q ss_pred eeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCccccccc
Q 036361 328 CHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYF 407 (485)
Q Consensus 328 ~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~ 407 (485)
++.||+||++++++.+.... ....++|.|.+++ +++|+|+ +++++++| +.|||+++|++++.||+
T Consensus 329 ~~~YG~TE~~~~~~~~~~~~-----------~~~~~~G~p~~~~-~~~i~d~-~g~~~~~g--~~GEl~v~g~~~~~gY~ 393 (529)
T 2v7b_A 329 LDGIGSTEMLHIFLSNRAGA-----------VEYGTTGRPVPGY-EIELRDE-AGHAVPDG--EVGDLYIKGPSAAVMYW 393 (529)
T ss_dssp EEEEECTTTSSEEEECCTTC-----------CCTTSCCEECTTC-EEEEECT-TSCBCCTT--SCEEEEEECTTCCCCBT
T ss_pred eeeEchhhcCceeeccccCC-----------CccCCcccCCCCC-EEEEECC-CCCCCCCC--CccEEEEecCCcccccC
Confidence 99999999976655442111 1235889999998 9999995 79999999 88999999999999999
Q ss_pred CChhhhcccccCCCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 408 KDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 408 ~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
++++.+...|. ++||+|||+|++++||.++++||.+|+||++|++|+|.+||++|.++|+|.+|+|++. ++..|
T Consensus 394 ~~~~~t~~~f~-~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~~-~~~~~ 467 (529)
T 2v7b_A 394 NNREKSRATFL-GEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVLVQHDAVLEAAVVGV-DHGGL 467 (529)
T ss_dssp TCHHHHHHHEE-TTEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHHHHHHHTTSTTEEEEEEEEE-EETTE
T ss_pred CChHHHHHhhh-cCCcccCceEEECCCccEEEeCccCCeEEECCEEECHHHHHHHHHhCCCcceEEEEEe-cCCCc
Confidence 99999999997 8999999999999999999999999999999999999999999999999999999998 44333
No 26
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=2e-66 Score=529.39 Aligned_cols=436 Identities=20% Similarity=0.213 Sum_probs=361.9
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC---CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhcc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN---NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMS 87 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~---~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~ 87 (485)
....++.++|+++++++|+.+++... ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||+++
T Consensus 18 ~~~~tl~~~l~~~a~~~p~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~ 97 (576)
T 3gqw_A 18 ADFPTLVDALDYAALSSAGMNFYDRRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEFVEAFFACQYA 97 (576)
T ss_dssp SCCSSHHHHHHHHTTSSCEEEEECTTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHHHHHHHHHHHT
T ss_pred CCCCcHHHHHHHHhhCCCCeEEeCCCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHHHHHh
Confidence 44569999999999999999888653 378999999999999999999999999999999999999999999999999
Q ss_pred CceEEecCCCCC-------HHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCcc
Q 036361 88 GAILNNINTRLD-------AHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTV 160 (485)
Q Consensus 88 G~~~v~l~~~~~-------~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 160 (485)
|++++|+++.++ .+++.++++.++++++|++.+....+........ ...++....
T Consensus 98 G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~----~~~~~~~~~-------------- 159 (576)
T 3gqw_A 98 GLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNP----ELHVLSHAW-------------- 159 (576)
T ss_dssp TCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCT----TCEEEEHHH--------------
T ss_pred CCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCC----cceecchhh--------------
Confidence 999999999998 7899999999999999999988777766554432 111111000
Q ss_pred ccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH-hCCCCCCEEEEecchh
Q 036361 161 TVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID-WAVPKQPVYLWTLPMF 239 (485)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~ 239 (485)
...............++++++++|||||||.||+|+++|+++..++...... +++.++|++++.+|++
T Consensus 160 -----------~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 228 (576)
T 3gqw_A 160 -----------FKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFY 228 (576)
T ss_dssp -----------HHTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTT
T ss_pred -----------hhcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCcc
Confidence 0000001111123457899999999999999999999999999888777654 7889999999999999
Q ss_pred hHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCCC-----CCCCCCCCceEEecc
Q 036361 240 HANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNSP-----DFEPLKTPVQILTAG 309 (485)
Q Consensus 240 ~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-----~~~~l~~lr~i~~~g 309 (485)
|.+++.. ++.++..|+++++.+. +++..+++.++++++|+++++|++++.+.+.. ....++++|.+++||
T Consensus 229 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg 308 (576)
T 3gqw_A 229 HDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGA 308 (576)
T ss_dssp SHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECS
T ss_pred ccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccC
Confidence 9999876 6677888888888763 68999999999999999999999998886554 455689999999999
Q ss_pred CCCChhhhhhhh-cc------CCeeeeccCCccccccccccCCCCCCCCCChHHH-----------------hhhhhccC
Q 036361 310 APPPAPVLSRTE-SM------GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEER-----------------ARLKARQG 365 (485)
Q Consensus 310 ~~l~~~~~~~~~-~~------~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~G 365 (485)
+++++++.+++. .+ +..+++.||+||++.+++.+...........+.. .....++|
T Consensus 309 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G 388 (576)
T 3gqw_A 309 EPISAEQLHQFAECFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCG 388 (576)
T ss_dssp SCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCC
T ss_pred ccCCHHHHHHHHHHHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecC
Confidence 999999999988 44 6789999999999987776543222111100000 00113789
Q ss_pred ccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccCCc
Q 036361 366 VKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRSKD 445 (485)
Q Consensus 366 ~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~~~ 445 (485)
+|.+++ +++|+| ++++++++| +.|||+++|++++.||+++++.+...+. +|||+|||+|++ +||.++++||.+|
T Consensus 389 ~p~~~~-~~~i~d-~~g~~~~~g--~~GEl~v~g~~~~~gY~~~~~~~~~~~~-~g~~~TGDl~~~-~dG~l~~~GR~dd 462 (576)
T 3gqw_A 389 KALPEH-GIEIRN-EAGMPVAER--VVGHICISGPSLMSGYFGDQVSQDEIAA-TGWLDTGDLGYL-LDGYLYVTGRIKD 462 (576)
T ss_dssp EECTTC-EEEEEC-TTSCBCCTT--BCEEEEEESTTSCCCBTTCHHHHHHHHH-HSCEEEEEEEEE-ETTEEEEEEETTT
T ss_pred CcCCCC-eEEEEC-CCCCCCCCC--CeEEEEEeCccccccccCCccccccccC-CCeeeccceEEE-ECCEEEEEecCcc
Confidence 999998 999999 589999999 8999999999999999999988777655 899999999999 6999999999999
Q ss_pred eEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCC
Q 036361 446 VIISGGENICSAEVESVLYSNTAVNEAAVVARPDKF 481 (485)
Q Consensus 446 ~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~ 481 (485)
+||++|++|+|.+||++|.+||+|.+++|++..+..
T Consensus 463 ~ik~~G~~v~p~eIE~~l~~~p~V~~~~vv~~~~~~ 498 (576)
T 3gqw_A 463 LIIIRGRNIWPQDIEYIAEQEPEIHSGDAIAFVTAQ 498 (576)
T ss_dssp CEEETTEEECHHHHHHHHTTSSSCCTTSEEEEECTT
T ss_pred eEEECCEEECHHHHHHHHHhCcccccccEEEEEcCC
Confidence 999999999999999999999999998888877653
No 27
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=8.6e-68 Score=528.45 Aligned_cols=414 Identities=25% Similarity=0.327 Sum_probs=347.8
Q ss_pred CcchhHHHHHHHhhcCC-CcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 13 PLTTLGFLERAATAYSD-CPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~-~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
-.++.+.|.++++++|+ ++|+++.++++||+||.++++++|++|. .|++|+++++|++++++++|||+++|+++
T Consensus 21 ~~tl~~~l~~~a~~~p~d~~Al~~~~~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~~la~~~~Ga~~ 95 (505)
T 3nyq_A 21 MSSLFPALSPAPTGAPADRPALRFGERSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVAVVAALLAGVAA 95 (505)
T ss_dssp ---CCTTTSSCCCSGGGGSEEEEETTEEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHHHHHHHHHTCCE
T ss_pred cchhHHHHHHHHHhCCCCCeEEEECCeeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHHHHHHHHhCCEE
Confidence 35788889999999987 9999999999999999999999998874 48899999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+||+|..+.+++.++++.++++++|++.+.... ... .....+.++..
T Consensus 96 vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~-----~~~----~~~~~~~~~~~------------------------ 142 (505)
T 3nyq_A 96 VPLNPKSGDKELAHILSDSAPSLVLAPPDAELP-----PAL----GALERVDVDVR------------------------ 142 (505)
T ss_dssp EEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC-----GGG----TTSEEEECCTT------------------------
T ss_pred EEcCCCCCHHHHHHHHHHCCCCEEEECCccccc-----hhh----ccccccccccc------------------------
Confidence 999999999999999999999999998642100 000 01111111100
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHH-HHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGY-TWGM 250 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~-~~~~ 250 (485)
...........++++++++|||||||.||+|+++|+++...+......+++.++|++++.+|++|..++.. ++.+
T Consensus 143 ----~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~ 218 (505)
T 3nyq_A 143 ----ARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGP 218 (505)
T ss_dssp ----CCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHH
T ss_pred ----cccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHH
Confidence 00011112346789999999999999999999999999999999888899999999999999999999865 7899
Q ss_pred HhhcceEeecccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC-----CCCCCCCCceEEeccCCCChhhhhhhh-ccC
Q 036361 251 AAVGATNICLRRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP-----DFEPLKTPVQILTAGAPPPAPVLSRTE-SMG 324 (485)
Q Consensus 251 l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-----~~~~l~~lr~i~~~g~~l~~~~~~~~~-~~~ 324 (485)
+..|+++++.+.+++..+++.+ ++++|+++++|+++..+.+.. ....++++|.+++||+++++++.+++. .++
T Consensus 219 l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~~ 297 (505)
T 3nyq_A 219 LRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPELAKALAGARLLVSGSAALPVHDHERIAAATG 297 (505)
T ss_dssp HHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHHHHHHHHHCSEEEECSSCCCHHHHHHHHHHHS
T ss_pred HhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCchhhcccccceEEEECCCCCCHHHHHHHHHhcC
Confidence 9999999999999999999999 889999999999999998633 123467889999999999999999998 569
Q ss_pred CeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccC---CCceecEEEEecCc
Q 036361 325 FVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKR---DGVSLGEVVLRGGC 401 (485)
Q Consensus 325 ~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~---g~~~~Gel~v~~~~ 401 (485)
+++++.||+||++..++...... ....++|+|.+++ +++|+|+ ++++++. | +.|||+++|++
T Consensus 298 ~~~~~~YG~TE~~~~~~~~~~~~-----------~~~~~vG~p~~~~-~~~i~d~-~g~~~~~~~~g--~~GEl~v~g~~ 362 (505)
T 3nyq_A 298 RRVIERYGMTETLMNTSVRADGE-----------PRAGTVGVPLPGV-ELRLVEE-DGTPIAALDGE--SVGEIQVRGPN 362 (505)
T ss_dssp CCCEEEEEETTTEEEEECCTTSC-----------CCTTCCCEECTTC-EEEEC------CCCCCCSC--CCEEEEEESTT
T ss_pred CeeecccchhhcccccccCCCCC-----------CCCCCcccCCCCC-EEEEECC-CCCCcccCCCC--ceEEEEEecCc
Confidence 99999999999986655432111 1235789999998 9999996 6888876 5 88999999999
Q ss_pred ccccccCChhhhcccccCCCeeecCceEEEecCceEEEEccC-CceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 402 VTVGYFKDKESTRRCISDNGWFYTGDIAVMHVDGYVEIKDRS-KDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 402 ~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~gR~-~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
++.||+++++.+...|..++||+|||+|++++||.++++||. +|+||++|++|+|.|||++|.++|+|.+|+|++.+++
T Consensus 363 v~~GY~~~~~~t~~~f~~~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~~p~V~~a~Vv~~~~~ 442 (505)
T 3nyq_A 363 LFTEYLNRPDATAAAFTEDGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPEVREAAVTGEPDP 442 (505)
T ss_dssp SCCEETTCHHHHHHTBCTTSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHHHHHHHTTSTTEEEEEEEEEEET
T ss_pred hhhhhCCChhHhhhhhcCCCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHHHHHHHHHCcCccEEEEEeeECC
Confidence 999999999999999988999999999999999999999997 5999999999999999999999999999999999998
Q ss_pred CCCC
Q 036361 481 FWGE 484 (485)
Q Consensus 481 ~~g~ 484 (485)
.+|+
T Consensus 443 ~~g~ 446 (505)
T 3nyq_A 443 DLGE 446 (505)
T ss_dssp TTEE
T ss_pred CCCc
Confidence 8775
No 28
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=1.7e-67 Score=538.48 Aligned_cols=439 Identities=18% Similarity=0.192 Sum_probs=359.2
Q ss_pred CCCcchhHHHHHHHhhcCCCcEEEeC----CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhc
Q 036361 11 STPLTTLGFLERAATAYSDCPSIVYN----NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPM 86 (485)
Q Consensus 11 ~~~~tl~~~l~~~a~~~p~~~a~~~~----~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~ 86 (485)
...+|+.++|+++|+++|+++|+++. ++++||+||.++++++|++|++.|+++||+|+++++|++++++++|||++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~lA~~~ 87 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFLNKELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAFLGCLY 87 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEEcCCeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHHHHH
Confidence 46789999999999999999999874 48999999999999999999999999999999999999999999999999
Q ss_pred cCceEEecCCCC---CHHHHHHHhhhcCCcEEEEcCcchHHHHHHh-ccCCCCCCCCeEEEecCCcccccCccCCCcccc
Q 036361 87 SGAILNNINTRL---DAHNLSVLLQHSESKLVFVDHLHSSLVLEAL-SLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTV 162 (485)
Q Consensus 87 ~G~~~v~l~~~~---~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 162 (485)
+|++++|++|.. +.+++.++++.+++++++++.+....+.... .... ....+..+...
T Consensus 88 ~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--------------- 149 (590)
T 3kxw_A 88 AGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNP---KFLKIPAIALE--------------- 149 (590)
T ss_dssp TTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CC---EETTEEEEEGG---------------
T ss_pred hCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcc---cccccceeech---------------
Confidence 999999999987 4578999999999999999876554432211 0000 00111111100
Q ss_pred ccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHh
Q 036361 163 DFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHAN 242 (485)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 242 (485)
.+.... ..........++++++++|||||||.||+|++||+++..++.+....+++.+++++++.+|++|.+
T Consensus 150 -------~~~~~~-~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 221 (590)
T 3kxw_A 150 -------SIELNR-SSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDM 221 (590)
T ss_dssp -------GCCGGG-GGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHH
T ss_pred -------hccccc-cccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcch
Confidence 000000 001111235678999999999999999999999999999999998899999999999999999999
Q ss_pred HHHH-HHHHHhhcceEeecccC----CHHHHHHHHHhcCceeeecchHHHHHHhCCC-----CCCCCCCCceEEeccCCC
Q 036361 243 GWGY-TWGMAAVGATNICLRRF----DASAISDLIQKHNVTHMCGAPVVLNMISNSP-----DFEPLKTPVQILTAGAPP 312 (485)
Q Consensus 243 g~~~-~~~~l~~G~~~~~~~~~----~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-----~~~~l~~lr~i~~~g~~l 312 (485)
|+.. ++.+++.|+++++.+.+ ++..+++.++++++|++.++|+++..+.+.. ...+++++|.+++||+++
T Consensus 222 g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~l 301 (590)
T 3kxw_A 222 GLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEPV 301 (590)
T ss_dssp HHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSCC
T ss_pred hhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCCC
Confidence 9886 78899999999998865 8999999999999999999999999887642 445789999999999999
Q ss_pred Chhhhhhhh-cc------CCeeeeccCCccccccccccCCCCCCCC---------------C-ChHHHhhhhhccCcccc
Q 036361 313 PAPVLSRTE-SM------GFVVCHGYGLTETAGLVVSCSWKPEWDK---------------L-PLEERARLKARQGVKTV 369 (485)
Q Consensus 313 ~~~~~~~~~-~~------~~~i~~~Yg~tE~~~~~~~~~~~~~~~~---------------~-~~~~~~~~~~~~G~~~~ 369 (485)
++++.+++. .+ +..+++.||+||++++++.......+.. . +.........++|.|.+
T Consensus 302 ~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~ 381 (590)
T 3kxw_A 302 REETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQ 381 (590)
T ss_dssp CHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESS
T ss_pred CHHHHHHHHHHHHHcCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCC
Confidence 999999987 43 3479999999999987765432211000 0 00111123467888887
Q ss_pred CcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccC------CC--eeecCceEEEecCceEEEEc
Q 036361 370 GLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISD------NG--WFYTGDIAVMHVDGYVEIKD 441 (485)
Q Consensus 370 ~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------~~--~~~TGD~~~~~~~g~l~~~g 441 (485)
+ ++|+|++++.++++| +.|||+|+||+++.||+++++.+...|.+ +| ||+|||+|++| ||.|+|+|
T Consensus 382 ~---v~i~d~~~~~~~~~g--~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~d-dG~l~~~G 455 (590)
T 3kxw_A 382 E---VKIIDPDTLIPCDFD--QVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLH-ENELYVTG 455 (590)
T ss_dssp E---EEEECTTTCCBCCTT--BCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEE-TTEEEEEE
T ss_pred C---eEEEcCCCCcCCCCC--CEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEE-CCEEEEEc
Confidence 6 788998779999999 88999999999999999999999998864 24 99999999999 99999999
Q ss_pred cCCceEEeCCeeechHHHHHHH-hcCcCcc--eeEEEeccCCC
Q 036361 442 RSKDVIISGGENICSAEVESVL-YSNTAVN--EAAVVARPDKF 481 (485)
Q Consensus 442 R~~~~i~~~G~~i~~~~ie~~l-~~~~~v~--~~~v~~~~~~~ 481 (485)
|.+|+||++|++|+|.|||++| ..+|+|. +|+|++.+++.
T Consensus 456 R~dd~Ik~~G~~v~p~eIE~~l~~~~~~v~~~~~~v~~~~~~~ 498 (590)
T 3kxw_A 456 RIKDLIIIYGKNHYPQDIEFSLMHSPLHHVLGKCAAFVIQEEH 498 (590)
T ss_dssp ESSCHHHHHHHTTHHHHHHHHHHHSGGGGGEEEEEEEEEEETT
T ss_pred CccceEEECCEecCHHHHHHHHHhcCccccCccEEEEEecCCC
Confidence 9999999999999999999999 7889998 89999988765
No 29
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=9.2e-67 Score=529.13 Aligned_cols=430 Identities=18% Similarity=0.185 Sum_probs=316.4
Q ss_pred CCCCcchhHHHHHHHhhcCCCcEEEeCC----------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH
Q 036361 10 NSTPLTTLGFLERAATAYSDCPSIVYNN----------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE 79 (485)
Q Consensus 10 ~~~~~tl~~~l~~~a~~~p~~~a~~~~~----------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~ 79 (485)
....+++.++|+++|+++|+++|+++.+ +++||+||.++++++|++|.+.|+ +||+|+++++|++++++
T Consensus 16 ~~~~~tl~~~l~~~a~~~p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~~~ 94 (562)
T 3ite_A 16 YTSTVPPSHYIETWAKTHPEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIAFA 94 (562)
T ss_dssp --CCCCTTHHHHHHHHHCTTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHHHH
T ss_pred ecccCCHHHHHHHHHHHCCCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHHHH
Confidence 3567899999999999999999998743 789999999999999999999999 79999999999999999
Q ss_pred HHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCc
Q 036361 80 LQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPT 159 (485)
Q Consensus 80 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 159 (485)
++|||+++|++++|+++.++.+++.++++.++++++|++.+....+ . ......++....
T Consensus 95 ~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~-------~-~~~~~~~~~~~~------------- 153 (562)
T 3ite_A 95 IIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGV-------E-LPPETKVLDTKN------------- 153 (562)
T ss_dssp HHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTC-------C-CCTTCEEEETTC-------------
T ss_pred HHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEcccccccc-------c-cCccceeecccc-------------
Confidence 9999999999999999999999999999999999999986543221 0 001111111110
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH--------hCCCCCCE
Q 036361 160 VTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID--------WAVPKQPV 231 (485)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~--------~~~~~~~~ 231 (485)
..+.+....... ........++++++++|||||||.||+|+++|+++...+...... +.+...++
T Consensus 154 ------~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (562)
T 3ite_A 154 ------QSFIENLSTQDT-SDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGK 226 (562)
T ss_dssp ------HHHHHHHHHSCC-SCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCE
T ss_pred ------hhhhhhcccccc-cccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCce
Confidence 011111111111 111223456788999999999999999999999998877665443 34778899
Q ss_pred EEEecchhhHhHHHHHHHHHhhcceEeecccCC-HHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccC
Q 036361 232 YLWTLPMFHANGWGYTWGMAAVGATNICLRRFD-ASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGA 310 (485)
Q Consensus 232 ~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~-~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~ 310 (485)
+++..|+.|..++..++.++..|+++++.+.+. +..+++.++++++|++.++|++++.+... ...++++|.+++||+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~~--~~~~~~lr~~~~gG~ 304 (562)
T 3ite_A 227 FLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGLV--PEDAPHLVYLGVGGE 304 (562)
T ss_dssp EECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTCC--GGGSTTCCEEEEESS
T ss_pred EEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhcccC--ccccCceEEEEEecC
Confidence 999999999988888888999999999887543 57788999999999999999999988554 356889999999999
Q ss_pred CCChhhhhhhhc-cCCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCC
Q 036361 311 PPPAPVLSRTES-MGFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDG 389 (485)
Q Consensus 311 ~l~~~~~~~~~~-~~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~ 389 (485)
++++++.+++.+ +++.+++.||+||++..++....... ....++|.|.++. +++|+|+++++++++|
T Consensus 305 ~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~----------~~~~~~G~p~~~~-~~~i~d~~~~~~~~~g- 372 (562)
T 3ite_A 305 KMTPRTQQIWSSSDRVALVNVYGPTEVTIGCSAGRILPD----------SDTRCIGHPLGDS-VAHVLAPGSNEHVKKG- 372 (562)
T ss_dssp CCCHHHHHHHTTCSSCEEEEEECCGGGCSCSEEEECCTT----------SCTTEEEEECTTC-EEEEECTTSSCBCCTT-
T ss_pred CCCHHHHHHHhhCCCcEEEEeeccchheeeeeeeeecCC----------CCCccccccCCCC-eEEEEeCCCCCCCCCC-
Confidence 999999999984 58999999999999876665432221 1235789999998 9999998889999999
Q ss_pred ceecEEEEecCcccccccCChhhhcccccCCC--eeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcC-
Q 036361 390 VSLGEVVLRGGCVTVGYFKDKESTRRCISDNG--WFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSN- 466 (485)
Q Consensus 390 ~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~--~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~- 466 (485)
+.|||+++|++++.||+++++.+...+. +| ||+|||+|++|+||+|+|+||.+|+||++|++|+|.|||++|.++
T Consensus 373 -~~GEl~v~g~~v~~GY~~~p~~t~~~~~-~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~ 450 (562)
T 3ite_A 373 -MAGELVIEGSLVANGYLNRPDAKGFCDI-NGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGEVSEVIRSLS 450 (562)
T ss_dssp -SCEEEEEESTTSCCEESSCTTCCSEEEE-TTEEEEEEEEEEEECTTSCEEEEEEC------------------------
T ss_pred -CceEEEEeccccchhhCCCccccccccC-CCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHHHHHHHHhcC
Confidence 8899999999999999999998887765 55 999999999999999999999999999999999999999999998
Q ss_pred cCcceeEEEeccCCCCCC
Q 036361 467 TAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 467 ~~v~~~~v~~~~~~~~g~ 484 (485)
+.+.+++|++.+++..|+
T Consensus 451 ~~~~~~~v~~~~~~~~~~ 468 (562)
T 3ite_A 451 PTDIDVVTLLLNHPGTSK 468 (562)
T ss_dssp ------------------
T ss_pred CCceeEEEEEecCCCCcc
Confidence 888999999988877665
No 30
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-65 Score=564.27 Aligned_cols=429 Identities=21% Similarity=0.253 Sum_probs=361.8
Q ss_pred CCcchhHHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceE
Q 036361 12 TPLTTLGFLERAATAYSDCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAIL 91 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~ 91 (485)
...+++++|+++++++|+++|+++.++++||+||+++++++|+.|++.|+++|++|+|+++|++++++++|||+++|+++
T Consensus 462 ~~~~l~~~~~~~~~~~p~~~Av~~~~~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~lailkaG~~~ 541 (1304)
T 2vsq_A 462 ETKPLTYWFKEAVNANPDAPALTYSGQTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILGVLKAGAAY 541 (1304)
T ss_dssp CCCCHHHHHHHHHHHCTTSEEEESSSCEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHHHHHTTCEE
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEECCeeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHHHHHHCCEE
Confidence 34789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCccCCCccccccccccccc
Q 036361 92 NNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTTTSPTVTVDFIDTYEGF 171 (485)
Q Consensus 92 v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (485)
+||+|.++.+++.++++.+++++++++.+..+.+. ..+ .....+.+++... +
T Consensus 542 vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~----~~~---~~~~~~~~~~~~~------------------~--- 593 (1304)
T 2vsq_A 542 LPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAA----ELP---YTGTTLFIDDQTR------------------F--- 593 (1304)
T ss_dssp EECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTST----TCC---CCSEEEESSCGGG------------------G---
T ss_pred EEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhh----ccC---CCCcEEEeccccc------------------c---
Confidence 99999999999999999999999999876443211 011 1222333222110 0
Q ss_pred cccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHH
Q 036361 172 VEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMA 251 (485)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l 251 (485)
. . ..........++++++++|||||||.||||+++|+++.+. .+....+.+.++++++...|++|..+...++.++
T Consensus 594 ~-~--~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l 669 (1304)
T 2vsq_A 594 E-E--QASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASM 669 (1304)
T ss_dssp G-S--CSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHH
T ss_pred c-c--ccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHH
Confidence 0 0 0111112346789999999999999999999999998754 3344456788999999999999998888899999
Q ss_pred hhcceEeeccc---CCHHHHHHHHHhcCceeeecchHHHHHHhCCCCCCCCCCCceEEeccCCCChhhhhhhhc-c-CCe
Q 036361 252 AVGATNICLRR---FDASAISDLIQKHNVTHMCGAPVVLNMISNSPDFEPLKTPVQILTAGAPPPAPVLSRTES-M-GFV 326 (485)
Q Consensus 252 ~~G~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~i~~~g~~l~~~~~~~~~~-~-~~~ 326 (485)
..|+++++.+. +++..+.+.|+++++|+++++|++++.+.+.. ...++++|.+++||+++++++.+++.+ + +.+
T Consensus 670 ~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~-~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~ 748 (1304)
T 2vsq_A 670 LNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG-EDWMKGLRCILFGGERASVPHVRKALRIMGPGK 748 (1304)
T ss_dssp TTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC-SHHHHTCSEEEEESSCCCHHHHHHHHHHHCTTC
T ss_pred HcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc-hhcCCCccEEEEecCCCCHHHHHHHHHhCCCCE
Confidence 99999999874 68999999999999999999999999997642 234678999999999999999999884 4 578
Q ss_pred eeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccc
Q 036361 327 VCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGY 406 (485)
Q Consensus 327 i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy 406 (485)
+++.||+||++.+++.+....... .....++|+|++++ +++|+|+ ++++++.| +.|||+|+|+++++||
T Consensus 749 l~n~YG~TE~~~~~~~~~~~~~~~-------~~~~~~iG~p~~~~-~~~i~d~-~~~~~p~G--~~GEl~i~G~~v~~GY 817 (1304)
T 2vsq_A 749 LINCYGPTEGTVFATAHVVHDLPD-------SISSLPIGKPISNA-SVYILNE-QSQLQPFG--AVGELCISGMGVSKGY 817 (1304)
T ss_dssp EEEEECCGGGSSCSEEEECCCCCS-------SCSSCCCBEECTTE-EEEEECT-TSCBCCTT--CCEEEEEEETTCCCCB
T ss_pred EEEeEChhHHhHHheeeeccCccc-------cCCCCCCceeeCCC-EEEEECC-CcCCCCCC--CceEEEEeccccCccc
Confidence 999999999987766543221100 01235789999998 9999996 78999999 8899999999999999
Q ss_pred cCChhhhcccccC------CCeeecCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCC
Q 036361 407 FKDKESTRRCISD------NGWFYTGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDK 480 (485)
Q Consensus 407 ~~~~~~~~~~~~~------~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~ 480 (485)
+++++.|..+|.. ++||+|||+|++++||.|+|+||.||+||++|++|.|.|||++|.++|+|++|+|++.+++
T Consensus 818 ~~~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eIE~~l~~~p~V~~a~V~~~~~~ 897 (1304)
T 2vsq_A 818 VNRADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKDAVVVADRHE 897 (1304)
T ss_dssp TTCHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHHHSSSCCEEEEEEECCS
T ss_pred cCCcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHHHHHHHhCCCCceEEEEEEecC
Confidence 9999999988843 3499999999999999999999999999999999999999999999999999999999887
Q ss_pred CCCC
Q 036361 481 FWGE 484 (485)
Q Consensus 481 ~~g~ 484 (485)
..++
T Consensus 898 ~~~~ 901 (1304)
T 2vsq_A 898 SGDA 901 (1304)
T ss_dssp SSCC
T ss_pred CCCE
Confidence 6543
No 31
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=2.8e-62 Score=487.62 Aligned_cols=402 Identities=20% Similarity=0.241 Sum_probs=318.2
Q ss_pred CCCCCCcchhHHHHHHHhhcCCCcEEEeCC---------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 036361 8 HANSTPLTTLGFLERAATAYSDCPSIVYNN---------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY 78 (485)
Q Consensus 8 ~~~~~~~tl~~~l~~~a~~~p~~~a~~~~~---------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~ 78 (485)
..+++.+++.++|+++++++|+++|+++.+ +++||+||.++++++|++|++.|+ +||+|+|+++|+++++
T Consensus 18 ~~~~~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~ 96 (480)
T 3t5a_A 18 GSHMSVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYV 96 (480)
T ss_dssp ------CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHH
T ss_pred cCCCCcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHH
Confidence 345778899999999999999999999865 899999999999999999999996 9999999999999999
Q ss_pred HHHHhhhccCceEEecCC---CCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecCCcccccCcc
Q 036361 79 ELQFGVPMSGAILNNINT---RLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDDDAAASSTTT 155 (485)
Q Consensus 79 ~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 155 (485)
+++|||+++|++++||++ ..+.+++.++++.++++++|++....+.+.+........ ....++.++...
T Consensus 97 ~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~------- 168 (480)
T 3t5a_A 97 VAFLGALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGE-SPPSIIEVDLLD------- 168 (480)
T ss_dssp HHHHHHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC-------CCEEEEGGGSC-------
T ss_pred HHHHHHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccc-cccceeEecccc-------
Confidence 999999999999999999 778999999999999999999998877766544332210 112233222111
Q ss_pred CCCccccccccccccccccCCCCCCCCCCCCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCC------C
Q 036361 156 TSPTVTVDFIDTYEGFVEEGDPKYKWVRPRSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPK------Q 229 (485)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~------~ 229 (485)
.............++++++++|||||||.||+|++||+++..++.+....+.... +
T Consensus 169 ------------------~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~ 230 (480)
T 3t5a_A 169 ------------------LDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPN 230 (480)
T ss_dssp ------------------TTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTT
T ss_pred ------------------cccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCC
Confidence 0001111122346779999999999999999999999999999988888887777 8
Q ss_pred CEEEEecchhhHhHHHH-HHHHHhhcceEeeccc----CCHHHHHHHHHhcCceeeecchHHHHHHhCC------CCCCC
Q 036361 230 PVYLWTLPMFHANGWGY-TWGMAAVGATNICLRR----FDASAISDLIQKHNVTHMCGAPVVLNMISNS------PDFEP 298 (485)
Q Consensus 230 ~~~~~~~p~~~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~------~~~~~ 298 (485)
+++++.+|++|.+++.. ++.+++.|+++++.+. +++..+++.++++++| +..+|+++..++.. .....
T Consensus 231 d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~~~~~~~~ 309 (480)
T 3t5a_A 231 SALVSWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTDDDMAGRD 309 (480)
T ss_dssp EEEEECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCTGGGTTCC
T ss_pred CeEEEeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCcccccccc
Confidence 99999999999999764 7889999999999875 3999999999999999 78888888777642 14567
Q ss_pred CCCCceEEeccCCCChhhhhhhh-ccC------CeeeeccCCccccccccccCCCCCCCC--CChHHH------------
Q 036361 299 LKTPVQILTAGAPPPAPVLSRTE-SMG------FVVCHGYGLTETAGLVVSCSWKPEWDK--LPLEER------------ 357 (485)
Q Consensus 299 l~~lr~i~~~g~~l~~~~~~~~~-~~~------~~i~~~Yg~tE~~~~~~~~~~~~~~~~--~~~~~~------------ 357 (485)
++++|.+++||+++++++.+++. .++ +.+++.||+||++++++.......... ......
T Consensus 310 l~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 389 (480)
T 3t5a_A 310 LGNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGG 389 (480)
T ss_dssp CTTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSS
T ss_pred hhhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCC
Confidence 89999999999999999999998 442 479999999999987776543221110 011110
Q ss_pred hhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhccccc-----------CCCeeecC
Q 036361 358 ARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS-----------DNGWFYTG 426 (485)
Q Consensus 358 ~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~-----------~~~~~~TG 426 (485)
.....++|+|.+ . +++|+|+++++++++| +.|||+|+|++++.||+++++.+...|. .++||+||
T Consensus 390 ~~~~~~~G~p~~-~-~~~ivd~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TG 465 (480)
T 3t5a_A 390 ATSLISYMLPRS-P-IVRIVDSDTCIECPDG--TVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTG 465 (480)
T ss_dssp CEEEECEECCSS-S-EEEEEETTTTEECCTT--BCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEE
T ss_pred cceeeecCcccC-C-EEEEEcCCCCcCCCCC--CEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeecc
Confidence 123457899999 7 9999998779999999 8999999999999999999999999884 46799999
Q ss_pred ceEEEecCceEEEEcc
Q 036361 427 DIAVMHVDGYVEIKDR 442 (485)
Q Consensus 427 D~~~~~~~g~l~~~gR 442 (485)
|+|+++ ||+|+|+||
T Consensus 466 Dlg~~d-dG~l~~~GR 480 (480)
T 3t5a_A 466 DSGFVT-DGKMFIIGR 480 (480)
T ss_dssp EEEEEE-TTEEEECC-
T ss_pred ceeeEE-CCEEEEeCC
Confidence 999997 999999998
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=3.3e-44 Score=341.18 Aligned_cols=253 Identities=17% Similarity=0.151 Sum_probs=214.2
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc-CCH
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR-FDA 265 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~-~~~ 265 (485)
.|++++|+|||||||.||+|++||+++..++......++++++|++++.+|++|.+|+..++.++..|+++++.++ ++
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~~~~- 114 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEPTAN- 114 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECCCSC-
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCcccc-
Confidence 4689999999999999999999999999999999999999999999999999999999888899999999888764 33
Q ss_pred HHHHHHHHhcCceeeecchHHHHHHhCCC-CCCCCCCCceEEeccCCCChhhhhhhhccCCeeeeccCCccccccccccC
Q 036361 266 SAISDLIQKHNVTHMCGAPVVLNMISNSP-DFEPLKTPVQILTAGAPPPAPVLSRTESMGFVVCHGYGLTETAGLVVSCS 344 (485)
Q Consensus 266 ~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-~~~~l~~lr~i~~~g~~l~~~~~~~~~~~~~~i~~~Yg~tE~~~~~~~~~ 344 (485)
.++.++++++|++.++|++++.|++.. ....++++|.+++||+++++++.++++++++++++.||+||+++.++...
T Consensus 115 --~~~~i~~~~~t~~~~~P~~l~~ll~~~~~~~~l~~lr~v~~gG~~l~~~~~~~~~~~~~~~~~~YG~TEt~~~~~~~~ 192 (358)
T 4gs5_A 115 --PLAGLDHADFDFVAMVPMQLQSILENSATSGQVDRLGKVLLGGAPVNHALAMQISDLAMPVYQSYGMTETVSHVALKA 192 (358)
T ss_dssp --TTTTCSSCCCSEEEECHHHHHHHHHCTTTGGGGGGGCSEEECSSCCCHHHHHHHHTCSSCEEEEEECGGGSSEEEEEE
T ss_pred --HHHHHHHhCCeEEEcChHHHHHhhccccccccCCcceEEEEcccCCCchheecccccCceEEeccccccccceeeccc
Confidence 366789999999999999999998766 45568899999999999999999999988999999999999987665543
Q ss_pred CCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhcccccCCCeee
Q 036361 345 WKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFY 424 (485)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~ 424 (485)
.... ..+.+|.+.+++ .+.+. +.|||+++|+.. +++||+
T Consensus 193 ~~~~-----------~~g~~~~~~pgv-~~~~~-------------~~Gel~~~g~~~----------------~~g~~~ 231 (358)
T 4gs5_A 193 LNGP-----------EASELYVFLPGI-QYGVD-------------ERGCLHISGAVT----------------NGQTVQ 231 (358)
T ss_dssp CSST-----------TCCSCEEECTTC-EEEEC-------------TTSEEEEESGGG----------------TTCCEE
T ss_pred cccc-----------ccceeeccCCCe-EEEec-------------CcCceEEecccc----------------cCccee
Confidence 2111 123556666665 55442 338999887532 278999
Q ss_pred cCceEEEecCceEEEEccCCceEEeCCeeechHHHHHHHh---cCcCcceeEEE-eccCCCCCC
Q 036361 425 TGDIAVMHVDGYVEIKDRSKDVIISGGENICSAEVESVLY---SNTAVNEAAVV-ARPDKFWGE 484 (485)
Q Consensus 425 TGD~~~~~~~g~l~~~gR~~~~i~~~G~~i~~~~ie~~l~---~~~~v~~~~v~-~~~~~~~g~ 484 (485)
|||+|++|+|| ++++||.||+||++|++|+|.+||++|. .||+|.+++|+ +.+|+.+||
T Consensus 232 TGDlg~~d~~g-~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V~~a~vv~~~~d~~~ge 294 (358)
T 4gs5_A 232 TNDLVEIHGNA-FQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNIGNAFFCWWEPDAKLGQ 294 (358)
T ss_dssp EEEEEEECSSE-EEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTCCCCEEEEEEEETTTEE
T ss_pred cCCccccccCc-eEEcccccCeEEECCEEECHHHHHHHHHHhccCCCccEEEEEEecCCccCCE
Confidence 99999999888 6677999999999999999999998874 68999998876 677888776
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=1.1e-42 Score=341.41 Aligned_cols=267 Identities=19% Similarity=0.224 Sum_probs=224.2
Q ss_pred CCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH---HHhCCCCCCEEEEecchhhHhHH-HHHHHHHhhcceEeecccC
Q 036361 188 WDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL---IDWAVPKQPVYLWTLPMFHANGW-GYTWGMAAVGATNICLRRF 263 (485)
Q Consensus 188 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~~~~g~-~~~~~~l~~G~~~~~~~~~ 263 (485)
+++++++|||||||.||+|+++|+++...+.... ..+++.++|++++..|+.|..+. ..++.++..|+++++.+.+
T Consensus 86 ~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~ 165 (436)
T 3qov_A 86 RDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG 165 (436)
T ss_dssp HHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC
T ss_pred CCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC
Confidence 7899999999999999999999999977665553 34578999999999998655554 4577889999999999888
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHHhCCC--C--CCCCCCCceEEeccCCCChhhhhhhhc-cCCeeeeccCCccccc
Q 036361 264 DASAISDLIQKHNVTHMCGAPVVLNMISNSP--D--FEPLKTPVQILTAGAPPPAPVLSRTES-MGFVVCHGYGLTETAG 338 (485)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~--~~~l~~lr~i~~~g~~l~~~~~~~~~~-~~~~i~~~Yg~tE~~~ 338 (485)
++..+++.|+++++|+++++|+++..|++.. . ...++++|.+++||+++++++.+++++ +++++++.||+||+++
T Consensus 166 ~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~ 245 (436)
T 3qov_A 166 NSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNG 245 (436)
T ss_dssp CHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTE
T ss_pred CHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcC
Confidence 9999999999999999999999999998664 1 123789999999999999999999984 5999999999999965
Q ss_pred cccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhhccccc
Q 036361 339 LVVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCIS 418 (485)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~ 418 (485)
.++...... ....+.+.++. .++|+|+++++++++| +.|||+++|. +...+.
T Consensus 246 ~~~~~~~~~-------------~~g~~~~~~~~-~v~i~d~~~g~~~~~g--~~Gel~v~~~------------~~~~~~ 297 (436)
T 3qov_A 246 PGVAFECQE-------------QNGMHFWEDCY-LVEIIDPETGEPVPEG--EIGELVLTTL------------DREMMP 297 (436)
T ss_dssp EEEEEECTT-------------CSSEEECTTTE-EEEEECTTTCSBCSTT--CCEEEEEEES------------SCCSSC
T ss_pred CeeEEecCC-------------CCeeEEccCce-EEEEEECCCCCCCCCC--CceEEEEecc------------CcCCce
Confidence 433322110 11245555677 9999998899999999 8899999983 223333
Q ss_pred CCCeeecCceEEEecCc------e---EEEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 419 DNGWFYTGDIAVMHVDG------Y---VEIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 419 ~~~~~~TGD~~~~~~~g------~---l~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
++||+|||+|+++++| . +++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|
T Consensus 298 -~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~p~v~~~~vv~~~~~~~~ 370 (436)
T 3qov_A 298 -LIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQFPELGSNYLITLETVNNQ 370 (436)
T ss_dssp -CCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTTCTTEEEEEEEEEEEETTE
T ss_pred -EEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHHHhCcCcCCcEEEEEEcCCCC
Confidence 7899999999999998 5 69999999999999999999999999999999999999998876544
No 34
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=9.1e-42 Score=334.95 Aligned_cols=269 Identities=19% Similarity=0.174 Sum_probs=224.2
Q ss_pred CCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH---HHhCCCCCCEEEEecch-hhHhHHHHHHHHHhhcceEeec
Q 036361 185 RSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL---IDWAVPKQPVYLWTLPM-FHANGWGYTWGMAAVGATNICL 260 (485)
Q Consensus 185 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~-~~~~g~~~~~~~l~~G~~~~~~ 260 (485)
..++++++++|||||||.||+|+++|+++...+.... ..+++.++|++++.+|+ +|..++...+.++..|+++++.
T Consensus 87 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 166 (437)
T 2y27_A 87 VPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPF 166 (437)
T ss_dssp SCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECC
T ss_pred CChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeC
Confidence 3567899999999999999999999999877664433 35678899999999998 6777777778889999999988
Q ss_pred ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCC--CCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCcc
Q 036361 261 RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFE--PLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTE 335 (485)
Q Consensus 261 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~--~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE 335 (485)
+.+++..+++.|+++++|+++++|+++..|.+.. ... .++++|.+++||+++++++.++++ .+++++++.||+||
T Consensus 167 ~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE 246 (437)
T 2y27_A 167 GGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSE 246 (437)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETT
T ss_pred CCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchh
Confidence 8889999999999999999999999999998653 112 257899999999999999999998 56999999999999
Q ss_pred cccc--ccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhh
Q 036361 336 TAGL--VVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEST 413 (485)
Q Consensus 336 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~ 413 (485)
+++. +..+... ....+.+.++. .++|+|+++++++++| +.|||+++|. +
T Consensus 247 ~~g~~~~~~~~~~--------------~~g~~~~~~~~-~~~i~d~~~g~~~~~g--~~Gel~v~~~------------t 297 (437)
T 2y27_A 247 VMGPGVASECVET--------------KDGPTIWEDHF-YPEIIDPETGEVLPDG--ELGELVFTSL------------T 297 (437)
T ss_dssp TTEEEEEECCTTT--------------CSSCEECTTTE-EEEEECTTTCCBCCTT--CCEEEEEEES------------S
T ss_pred hcCCeeEEecCCC--------------CCceeEccCce-EEEEEcCCCCCCCCCC--CccEEEEecC------------C
Confidence 8433 3322210 01234455666 9999998789999999 8899999982 2
Q ss_pred cccccCCCeeecCceEEEec-CceE-----EEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 414 RRCISDNGWFYTGDIAVMHV-DGYV-----EIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~-~g~l-----~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
...|. ++||+|||+|++++ +|++ ++.||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|
T Consensus 298 ~~~~~-~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~~~~~~~~ 372 (437)
T 2y27_A 298 KEALP-IIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQRALAPHYQIVLTKEGPL 372 (437)
T ss_dssp CSSSC-CCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCTTBCSCCEEEEEEETTE
T ss_pred cCCch-hheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHhCcCcCccEEEEEeecCCC
Confidence 33343 78999999999998 6985 8999999999999999999999999999999999999887765443
No 35
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=1.2e-41 Score=334.66 Aligned_cols=269 Identities=16% Similarity=0.173 Sum_probs=223.8
Q ss_pred CCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH---HHhCCCCCCEEEEecch-hhHhHHHHHHHHHhhcceEeec
Q 036361 185 RSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL---IDWAVPKQPVYLWTLPM-FHANGWGYTWGMAAVGATNICL 260 (485)
Q Consensus 185 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~-~~~~g~~~~~~~l~~G~~~~~~ 260 (485)
..++++++++|||||||.||+|+++|+++...+.... ..+++.++|++++.+|+ +|..++...+.++..|+++++.
T Consensus 89 ~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~ 168 (443)
T 2y4o_A 89 VPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPM 168 (443)
T ss_dssp SCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECC
T ss_pred CChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEEC
Confidence 3567899999999999999999999999877654443 35678999999999998 5677776778889999999998
Q ss_pred ccCCHHHHHHHHHhcCceeeecchHHHHHHhCCC--CCC--CCCCCceEEeccCCCChhhhhhhh-ccCCeeeeccCCcc
Q 036361 261 RRFDASAISDLIQKHNVTHMCGAPVVLNMISNSP--DFE--PLKTPVQILTAGAPPPAPVLSRTE-SMGFVVCHGYGLTE 335 (485)
Q Consensus 261 ~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~--~~~--~l~~lr~i~~~g~~l~~~~~~~~~-~~~~~i~~~Yg~tE 335 (485)
+.+++..+++.|+++++|++.++|+++..|.+.. ... .++++|.+++||+++++++.++++ .+++++++.||+||
T Consensus 169 ~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE 248 (443)
T 2y4o_A 169 SGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSE 248 (443)
T ss_dssp CSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETT
T ss_pred CCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchh
Confidence 8889999999999999999999999999998653 112 257899999999999999999998 56999999999999
Q ss_pred cccc--ccccCCCCCCCCCChHHHhhhhhccCccccCcceeEEecCCCCCcccCCCceecEEEEecCcccccccCChhhh
Q 036361 336 TAGL--VVSCSWKPEWDKLPLEERARLKARQGVKTVGLTEVDVVNPETGESVKRDGVSLGEVVLRGGCVTVGYFKDKEST 413 (485)
Q Consensus 336 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~i~~~~~~~~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~ 413 (485)
+++. +..+... ....+.+.++. .++|+|+++++++++| +.|||+++|. +
T Consensus 249 ~~g~~~~~~~~~~--------------~~g~~~~~~~~-~~~i~d~~~g~~~~~G--~~Gel~v~~~------------t 299 (443)
T 2y4o_A 249 VMGPGVACECVET--------------KDGPVIWEDHF-YPEIIDPVTGEVLPDG--SQGELVFTSL------------T 299 (443)
T ss_dssp TTEEEEEEECTTT--------------CCSEEECTTTE-EEEEECTTTCCBCCTT--CCEEEEEEES------------S
T ss_pred hcCCeEEeccCCC--------------CCceEEccCCe-EEEEEcCCCCCCCCCC--CceEEEEeCC------------C
Confidence 8443 3322210 00133344666 9999998789999999 8899999982 2
Q ss_pred cccccCCCeeecCceEEEecC-ceE-----EEEccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCC
Q 036361 414 RRCISDNGWFYTGDIAVMHVD-GYV-----EIKDRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWG 483 (485)
Q Consensus 414 ~~~~~~~~~~~TGD~~~~~~~-g~l-----~~~gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g 483 (485)
...|. ++||+|||+|+++++ |++ +++||.+|+||++|++|+|.+||++|.++|+|.+++|++.+++..|
T Consensus 300 ~~~~p-~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V~~~~vv~~~~~~~~ 374 (443)
T 2y4o_A 300 KEAMP-VIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLLSGQFQITLSRDGHM 374 (443)
T ss_dssp CSSSC-CSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHTSTTEEEEEEEEEEEETTE
T ss_pred cccCh-hheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHhCcCcCccEEEEEecCCCC
Confidence 23343 789999999999999 986 8999999999999999999999999999999999999987765433
No 36
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.97 E-value=7.8e-31 Score=251.32 Aligned_cols=234 Identities=17% Similarity=0.135 Sum_probs=179.5
Q ss_pred CCCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHH---HHhCCCCCCEEEEecch-hhHhHHHHHHHHHhhcceEeec
Q 036361 185 RSEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANAL---IDWAVPKQPVYLWTLPM-FHANGWGYTWGMAAVGATNICL 260 (485)
Q Consensus 185 ~~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~---~~~~~~~~~~~~~~~p~-~~~~g~~~~~~~l~~G~~~~~~ 260 (485)
..++++++++|||||||.||+|+++|+++...+.+.. ..+++.+++++++.+|+ +|..++...+.++..|+ +++.
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~-~v~~ 166 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGG-MFFS 166 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTS-CEEC
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCC-EEEC
Confidence 3677899999999999999999999999988877543 44567899999999999 99999888777788888 6666
Q ss_pred ccCCHH-----------------------HHHHHHHhcCceeeecchHHHHHHhCCCC--CCCCCCCceEEeccCCCChh
Q 036361 261 RRFDAS-----------------------AISDLIQKHNVTHMCGAPVVLNMISNSPD--FEPLKTPVQILTAGAPPPAP 315 (485)
Q Consensus 261 ~~~~~~-----------------------~~~~~i~~~~~t~~~~~p~~~~~l~~~~~--~~~l~~lr~i~~~g~~l~~~ 315 (485)
..++|. .+++.|+++++|++.++|+++..|++... ...++++|.+++||++++++
T Consensus 167 ~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~lr~i~~gGe~l~~~ 246 (369)
T 3hgu_A 167 IDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVVLQMKQSLAQITLGGTELNLD 246 (369)
T ss_dssp CCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHHHHHHHHCSEEEEESSCCCHH
T ss_pred ccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhhccccCCeeEEEECCccCCHH
Confidence 677877 88889999999999999999999987642 23467899999999999999
Q ss_pred hhhhhh-cc--CCeeeeccCCccccccccccCCCCCCCCCChHHHhhhhhccCcc------ccCcceeEEecCCCCCccc
Q 036361 316 VLSRTE-SM--GFVVCHGYGLTETAGLVVSCSWKPEWDKLPLEERARLKARQGVK------TVGLTEVDVVNPETGESVK 386 (485)
Q Consensus 316 ~~~~~~-~~--~~~i~~~Yg~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~------~~~~~~~~i~~~~~~~~~~ 386 (485)
+++++. +. ++++++.||+||+++++..+.. .++|.+ .+++ +++|+|++++++++
T Consensus 247 ~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~----------------~~~G~~~~~~~~~~~~-~v~ivD~~~g~~vp 309 (369)
T 3hgu_A 247 EIKFIASEILPDCEFSASYGSTSALGVSRSLLI----------------TSESQQVIYDSFSPFI-TYDVVDSITAQTVE 309 (369)
T ss_dssp HHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB----------------CTTCSSCEEECCTTTE-EEEEECTTTCSBCC
T ss_pred HHHHHHHHhCCCcEEEcccCchhhhcceecccc----------------ccCCCcccccCCCCCe-EEEEECCCCCcCCC
Confidence 999998 55 8999999999999877654420 147888 8887 99999988899999
Q ss_pred CCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecC--c-------eEEEEccCCceEEeCCe
Q 036361 387 RDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVD--G-------YVEIKDRSKDVIISGGE 452 (485)
Q Consensus 387 ~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~--g-------~l~~~gR~~~~i~~~G~ 452 (485)
+| +.|||+|++.. ...+ -.+|+|||+++..+. | .+..++|.++..++.|.
T Consensus 310 ~G--~~GEl~vt~l~------------~~~~--l~ry~tgD~~~~~~~~~g~~~d~~~~v~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 310 YG--ERGNVIVTHLS------------PWAF--YPRVAERDTAIRLPGVSGFAGDRLADIEPLKISEGRKVIEGV 368 (369)
T ss_dssp TT--CEEEEEEEEEE------------TTEE--EEEEEEEEEEEEECCSTTCSSCEEEEEEECC-----------
T ss_pred CC--CceEEEEEEcC------------cccc--cccccCCceEEEecCCCCCcCcccccceeccccCCCceeeec
Confidence 99 89999998732 1111 115899999987543 2 35667788888887775
No 37
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=98.77 E-value=5.1e-08 Score=95.89 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=51.9
Q ss_pred ccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEec----CceEEEEccCCceEEeCCeeechHHHH
Q 036361 385 VKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHV----DGYVEIKDRSKDVIISGGENICSAEVE 460 (485)
Q Consensus 385 ~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~i~~~~ie 460 (485)
+..| +.+||+++..+ |.| .|++||++++.. ..++.|+||.++++.+.|++++..+||
T Consensus 381 Ve~G--~~YelViTt~~---GL~--------------RYr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~~~v~ 441 (581)
T 4eql_A 381 VKLG--CTYEPVVTNFA---GLY--------------RMRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNEEDLF 441 (581)
T ss_dssp CCTT--CEEEEEEECSS---SCC--------------SEECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEHHHHH
T ss_pred cCCC--ceEEEEEeecc---cee--------------eEEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCHHHHH
Confidence 4455 77999998842 222 399999999975 467999999999999999999999999
Q ss_pred HHHhcC
Q 036361 461 SVLYSN 466 (485)
Q Consensus 461 ~~l~~~ 466 (485)
++|.+.
T Consensus 442 ~al~~a 447 (581)
T 4eql_A 442 KAVSQA 447 (581)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 999843
No 38
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.67 E-value=6e-08 Score=95.52 Aligned_cols=63 Identities=16% Similarity=0.213 Sum_probs=52.4
Q ss_pred cccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEec----CceEEEEccCCceEEeCCeeechHHH
Q 036361 384 SVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHV----DGYVEIKDRSKDVIISGGENICSAEV 459 (485)
Q Consensus 384 ~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~----~g~l~~~gR~~~~i~~~G~~i~~~~i 459 (485)
.+..| +.+||+++..+ |.|+ |++||+++++. ..++.|+||.++++++.|+++++.+|
T Consensus 392 eVe~G--~~YelViTt~~---GL~R--------------Yr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~~~~v 452 (609)
T 4b2g_A 392 HVEVG--KEYELVITTYA---GLYR--------------YRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTDEAEL 452 (609)
T ss_dssp GCCTT--CEEEEEEECTT---SCCS--------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHH
T ss_pred HcCCC--CeEEEehhhhh---hhhh--------------eecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCCHHHH
Confidence 45566 77999997742 4433 99999999974 47799999999999999999999999
Q ss_pred HHHHhc
Q 036361 460 ESVLYS 465 (485)
Q Consensus 460 e~~l~~ 465 (485)
|+++.+
T Consensus 453 ~~av~~ 458 (609)
T 4b2g_A 453 QKAVDN 458 (609)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999983
No 39
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=98.53 E-value=6.1e-07 Score=88.04 Aligned_cols=63 Identities=16% Similarity=0.126 Sum_probs=51.9
Q ss_pred cccCCCceecEEEEecCcccccccCChhhhcccccCCCeeecCceEEEecC----ceEEEEccCCceEEeCCeeechHHH
Q 036361 384 SVKRDGVSLGEVVLRGGCVTVGYFKDKESTRRCISDNGWFYTGDIAVMHVD----GYVEIKDRSKDVIISGGENICSAEV 459 (485)
Q Consensus 384 ~~~~g~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~~~~~~~----g~l~~~gR~~~~i~~~G~~i~~~~i 459 (485)
.+..| +.+||+++..+ |.| .|++||++++..- .++.|+||.++++.+.|++++..+|
T Consensus 387 eve~G--~~YelviTt~~---GL~--------------RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~~~~v 447 (581)
T 4epl_A 387 QVKIG--EEYEVVITNYA---GLY--------------RYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNTERDL 447 (581)
T ss_dssp GCCTT--CEEEEEEESTT---SCS--------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBCHHHH
T ss_pred HcCCC--CeEEEEEeecc---cee--------------eEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECCHHHH
Confidence 45566 77999998842 222 3999999999742 5699999999999999999999999
Q ss_pred HHHHhc
Q 036361 460 ESVLYS 465 (485)
Q Consensus 460 e~~l~~ 465 (485)
|+++.+
T Consensus 448 ~~al~~ 453 (581)
T 4epl_A 448 QLSVES 453 (581)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999974
No 40
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=98.49 E-value=4.8e-08 Score=74.70 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=40.9
Q ss_pred ccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 441 DRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 441 gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
.|.||||+++|.+++|.+||++|.+||+|.++++++.+++..|+
T Consensus 1 srADDmIiv~G~nv~P~eIE~vl~~~p~v~~~~vv~v~~~~~~~ 44 (109)
T 3lax_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGSDYLITLETAESND 44 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEEEEEEEEEEETTEE
T ss_pred CCcCEEEEECCEEECHHHHHHHHHhCCCcccceEEEEeccccce
Confidence 38899999999999999999999999999999999999887664
No 41
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=98.40 E-value=1.1e-07 Score=72.45 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=39.9
Q ss_pred ccCCceEEeCCeeechHHHHHHHhcCcCcceeEEEeccCCCCCC
Q 036361 441 DRSKDVIISGGENICSAEVESVLYSNTAVNEAAVVARPDKFWGE 484 (485)
Q Consensus 441 gR~~~~i~~~G~~i~~~~ie~~l~~~~~v~~~~v~~~~~~~~g~ 484 (485)
||.+|+|+++|.+++|.+||++|.+||+|.++++++.+++..||
T Consensus 1 GR~~D~Iiv~G~nv~P~eIE~~l~~~p~v~~~~~v~v~~~~~~e 44 (109)
T 3gxs_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGSDYLITLETAESND 44 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEEEEEEEEEEETTEE
T ss_pred CCccCEEEECCEEECHHHHHHHHHhCCCcCCcEEEEEEcCCCce
Confidence 79999999999999999999999999999999988887765443
No 42
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=94.40 E-value=0.46 Score=45.49 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=74.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|.+.+...+..+++.+...|+.++|++....+-. ...+...++++..|+.+++++. .+++.+...+++.++.++
T Consensus 108 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~i~~~~~t~l 186 (437)
T 2y27_A 108 VGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIPFGG-GQTEKQVQLIQDFRPDII 186 (437)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEECCCS-CCHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHhCCCEE
Confidence 4589999998888888888889999999999988853 4445567888999999988765 478889999999999999
Q ss_pred EEcCcchHHHHHHh
Q 036361 116 FVDHLHSSLVLEAL 129 (485)
Q Consensus 116 i~~~~~~~~~~~~~ 129 (485)
+..+.....+.+..
T Consensus 187 ~~~Ps~~~~l~~~~ 200 (437)
T 2y27_A 187 MVTPSYMLSIADEI 200 (437)
T ss_dssp EECHHHHHHHHHHH
T ss_pred EECHHHHHHHHHHH
Confidence 99888777665543
No 43
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=94.30 E-value=0.44 Score=45.67 Aligned_cols=92 Identities=12% Similarity=0.085 Sum_probs=75.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|.+.+...+..+++.+...|+.++|++....+-+ ...+..+++++..|+..++.++. .++.+...+++.++.++
T Consensus 104 v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~~-~~~~~~~~i~~~~~t~~ 182 (436)
T 3qov_A 104 IVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAAG-NSKRQIKFISDFKTTAL 182 (436)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHTCCEE
T ss_pred EEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCCC-CHHHHHHHHHHHCCCEE
Confidence 4699999999999999888889999999999988753 44555678889999999887654 67888999999999999
Q ss_pred EEcCcchHHHHHHhc
Q 036361 116 FVDHLHSSLVLEALS 130 (485)
Q Consensus 116 i~~~~~~~~~~~~~~ 130 (485)
+..+.....+.+...
T Consensus 183 ~~~P~~~~~l~~~~~ 197 (436)
T 3qov_A 183 HAIPSYAIRLAEVFQ 197 (436)
T ss_dssp ECCHHHHHHHHHHHH
T ss_pred EECHHHHHHHHHHHH
Confidence 998887776665543
No 44
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=94.21 E-value=0.5 Score=45.34 Aligned_cols=91 Identities=13% Similarity=0.183 Sum_probs=74.5
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|.+.+...+..+++.+...|+.++|++...++-+ ...+...++++..|+.+++++.. .++.+...+++.++.++
T Consensus 110 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~i~~~~~t~l 188 (443)
T 2y4o_A 110 VGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVPMSGG-QTEKQVQLIRDFEPKII 188 (443)
T ss_dssp EEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEECCCSC-CHHHHHHHHHHHCCSEE
T ss_pred EecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEECCCC-CHHHHHHHHHHhCCcEE
Confidence 4589999998888888888889999999999988863 34455678888999999888654 78889999999999999
Q ss_pred EEcCcchHHHHHHh
Q 036361 116 FVDHLHSSLVLEAL 129 (485)
Q Consensus 116 i~~~~~~~~~~~~~ 129 (485)
+..+.....+.+..
T Consensus 189 ~~~Ps~~~~l~~~~ 202 (443)
T 2y4o_A 189 LVTPSYMLNLIDEM 202 (443)
T ss_dssp EECHHHHHHHHHHH
T ss_pred EECHHHHHHHHHHH
Confidence 99888776665543
No 45
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=85.82 E-value=12 Score=36.64 Aligned_cols=99 Identities=9% Similarity=-0.014 Sum_probs=73.0
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HH-HHHhhhccCceEEec
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YE-LQFGVPMSGAILNNI 94 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~--~~-~~lA~~~~G~~~v~l 94 (485)
.|+.+|++.. +..+|.+.+...+..... ..++.++|++...+|-.-.+ .. .+++.+..|+..+..
T Consensus 180 ~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~ 256 (539)
T 1mdb_A 180 KSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVE---VCWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVVLS 256 (539)
T ss_dssp CTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHH---HHTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEEC
T ss_pred CcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEEEC
Confidence 3566666542 146999988777665543 35789999998888865433 32 478888999998876
Q ss_pred CCCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHh
Q 036361 95 NTRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEAL 129 (485)
Q Consensus 95 ~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (485)
+ ...++.+...+++.++..++..+.....+.+..
T Consensus 257 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 290 (539)
T 1mdb_A 257 P-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAA 290 (539)
T ss_dssp S-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHH
T ss_pred C-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCc
Confidence 5 467888999999999999999887777665543
No 46
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=84.75 E-value=13 Score=36.03 Aligned_cols=99 Identities=10% Similarity=0.116 Sum_probs=74.2
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINT 96 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 96 (485)
.|+.+|++.. +..+|.+.+...+..... ..++.++|++...+|-.- -.+..+++++..|+..+..+
T Consensus 161 ~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 236 (501)
T 3ipl_A 161 NLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIVD- 236 (501)
T ss_dssp CTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-
T ss_pred CCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeCC-
Confidence 4567776652 146999998877666543 358999999998888753 23344677888999988875
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHh
Q 036361 97 RLDAHNLSVLLQHSESKLVFVDHLHSSLVLEAL 129 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (485)
..+++.+...+++.++..++..+.....+.+..
T Consensus 237 ~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 269 (501)
T 3ipl_A 237 KFNAEQILTMIKNERITHISLVPQTLNWLMQQG 269 (501)
T ss_dssp SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcC
Confidence 467889999999999999999888777665543
No 47
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=83.15 E-value=4.2 Score=37.53 Aligned_cols=95 Identities=12% Similarity=0.014 Sum_probs=65.1
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccCceEEecCC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSGAILNNINT 96 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G~~~v~l~~ 96 (485)
+.|.+|++.. +..+|++.+...+..++. ..+++++|++...+|-.- -.+..++..+..|+..+..++
T Consensus 35 ~~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~~ 111 (358)
T 4gs5_A 35 LGGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTEP 111 (358)
T ss_dssp HHTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEECC
T ss_pred CCCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecCc
Confidence 4566776642 156999998877666544 358999999998888653 334445666777887777765
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 97 RLDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
... ....+++.++..++..+.....+.+
T Consensus 112 ~~~---~~~~i~~~~~t~~~~~P~~l~~ll~ 139 (358)
T 4gs5_A 112 TAN---PLAGLDHADFDFVAMVPMQLQSILE 139 (358)
T ss_dssp CSC---TTTTCSSCCCSEEEECHHHHHHHHH
T ss_pred ccc---HHHHHHHhCCeEEEcChHHHHHhhc
Confidence 543 2456788899999988766655543
No 48
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=81.84 E-value=7.1 Score=38.44 Aligned_cols=97 Identities=12% Similarity=0.121 Sum_probs=71.8
Q ss_pred CCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH--HHHHHhhhccCceEEecCCC
Q 036361 29 DCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM--YELQFGVPMSGAILNNINTR 97 (485)
Q Consensus 29 ~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~--~~~~lA~~~~G~~~v~l~~~ 97 (485)
+.+|++.. +..+|.+.+...+......+...++.++|++...+|-.-.+ ...+++.+ .|+..+.++ .
T Consensus 192 ~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~-~ 269 (548)
T 2d1s_A 192 EQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT-K 269 (548)
T ss_dssp TCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC-C
T ss_pred CCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC-C
Confidence 66777653 24699999887766655443336889999998888765433 33467777 999988875 5
Q ss_pred CCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 98 LDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 98 ~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
..++.+...+++.++..++..+.....+.+
T Consensus 270 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 299 (548)
T 2d1s_A 270 FDEETFLKTLQDYKCTSVILVPTLFAILNK 299 (548)
T ss_dssp CCHHHHHHHHHHTTEEEEEECHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCcEEEecHHHHHHHHh
Confidence 678899999999999999998877666544
No 49
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=81.26 E-value=8.5 Score=37.82 Aligned_cols=97 Identities=12% Similarity=0.072 Sum_probs=72.2
Q ss_pred CCCcEEEeC--C-------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH---HHHhhhccCceEEecC
Q 036361 28 SDCPSIVYN--N-------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE---LQFGVPMSGAILNNIN 95 (485)
Q Consensus 28 p~~~a~~~~--~-------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~---~~lA~~~~G~~~v~l~ 95 (485)
++.+|++.. + ..+|.+.+...+...+.. .++.++|++...+|-...+-. .+++.+..|+..+..+
T Consensus 190 ~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v~~~ 266 (544)
T 3o83_A 190 ADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVVMAP 266 (544)
T ss_dssp TTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEEECS
T ss_pred ccceEEEEECCCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEEECC
Confidence 566676642 1 469999988777666543 588999999999886544332 4788888999888775
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHH
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
...+..+...+++.++..++..+.....+.+.
T Consensus 267 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 298 (544)
T 3o83_A 267 -NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEK 298 (544)
T ss_dssp -SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHCCCEEEechHHHHHHHhc
Confidence 45788888999999999999988776665443
No 50
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=80.92 E-value=16 Score=35.90 Aligned_cols=103 Identities=10% Similarity=0.004 Sum_probs=73.4
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++....+..+ -..-.+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+.++
T Consensus 32 ~p~~~A~~~~~~~~~~-~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 109 (549)
T 3g7s_A 32 FGEKTAIISAEPKFPS-EFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDY-VMTIYALWRVAATPVPINP 109 (549)
T ss_dssp HTTSEEEEEESSCCCC-SSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEeCCCcccc-cccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCCEEEccCC
Confidence 3557777665322111 112468888887776655544 4788999999998876543 345688889999888876
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+...++...++..++..++..+.....+
T Consensus 110 ~~~~~~l~~il~~~~~~~~i~~~~~~~~~ 138 (549)
T 3g7s_A 110 MYKSFELEHILNDSEATTLVVHSMLYENF 138 (549)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEEGGGHHHH
T ss_pred CCCHHHHHHHHHhcCCCEEEEChHHHHHH
Confidence 57888999999999999999887665544
No 51
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=79.72 E-value=12 Score=36.56 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=64.8
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH--HHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE--LQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
..+|.+.+...+...+.. .++.++|++...+|-.-.+-. .+++++ .|+..+.. +...+..+...+++.++..+
T Consensus 188 V~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~-~~~~~~~~~~~i~~~~~t~~ 262 (517)
T 3r44_A 188 VVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISM-PQFDATKVWSLIVEERVCIG 262 (517)
T ss_dssp EEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEEC-SSCCHHHHHHHHHHTTCCEE
T ss_pred eeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEe-CCCCHHHHHHHHHHhCCeEE
Confidence 469999988777666544 489999999998887644333 355555 89888877 45788899999999999999
Q ss_pred EEcCcchHHHHH
Q 036361 116 FVDHLHSSLVLE 127 (485)
Q Consensus 116 i~~~~~~~~~~~ 127 (485)
+..+.....+..
T Consensus 263 ~~~P~~~~~l~~ 274 (517)
T 3r44_A 263 GAVPAILNFMRQ 274 (517)
T ss_dssp EECHHHHHHHHH
T ss_pred EeHHHHHHHHHh
Confidence 998877766544
No 52
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=79.08 E-value=7.4 Score=38.31 Aligned_cols=98 Identities=9% Similarity=0.027 Sum_probs=71.2
Q ss_pred CCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cC
Q 036361 188 WDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RF 263 (485)
Q Consensus 188 ~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~ 263 (485)
+.++++.+..+.++ ..+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+..+ .+
T Consensus 35 ~~~a~~a~~~~~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~ 109 (550)
T 3rix_A 35 LVPGTIAFTDAHIE----VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQF-FMPVLGALFIGVAVAPANDIY 109 (550)
T ss_dssp TSTTCEEEEETTTC----CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTT-HHHHHHHHHHTCEEEECCTTC
T ss_pred CCceEEEeeecCCC----cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccH-HHHHHHHHHcCCEEeecCCcC
Confidence 45555533333322 468999887776655544 4789999999988866543 345678888998888775 57
Q ss_pred CHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 264 DASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 264 ~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+.++...++..++..++........+
T Consensus 110 ~~~~l~~~l~~~~~~~vi~~~~~~~~~ 136 (550)
T 3rix_A 110 NERELLNSMNISQPTVVFVSKKGLQKI 136 (550)
T ss_dssp CHHHHHHHHHHHCCSEEEECGGGHHHH
T ss_pred CHHHHHHHHHhcCCeEEEEcHHHHHHH
Confidence 889999999999999999887765544
No 53
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=79.03 E-value=3.4 Score=38.29 Aligned_cols=86 Identities=7% Similarity=-0.106 Sum_probs=62.9
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCc--hhHHHHHHhhhccCceEEecCCCCCHH--------------
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNV--PSMYELQFGVPMSGAILNNINTRLDAH-------------- 101 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~--~~~~~~~lA~~~~G~~~v~l~~~~~~~-------------- 101 (485)
..+|.+.+...+..+++.+...|+.++|++..++|-+ .--+...++++..|+.+++.+ .++.
T Consensus 109 v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~~~--~dp~~~~~~~~~~~~~~~ 186 (369)
T 3hgu_A 109 VVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFSID--IDPRWVKRSLSEGDTATV 186 (369)
T ss_dssp EEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEECCC--CCHHHHHHHHHTTCHHHH
T ss_pred EEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEECcc--CChHHHHHhhcccchhhh
Confidence 4589999998888877777778999999999998862 233444555588898665543 2333
Q ss_pred ---------HHHHHhhhcCCcEEEEcCcchHHH
Q 036361 102 ---------NLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 102 ---------~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
.+...+++.++.+++..+.....+
T Consensus 187 ~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l 219 (369)
T 3hgu_A 187 RKYTHHLVDQVQNTLMNQDIRFLVTTPPVLREL 219 (369)
T ss_dssp HHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHH
Confidence 666688999999999877655443
No 54
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=78.89 E-value=13 Score=36.36 Aligned_cols=96 Identities=10% Similarity=0.042 Sum_probs=70.3
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++....| -.+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+..+
T Consensus 35 ~p~~~a~~~~~~~-------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~la~~~~Gav~vpl~~ 106 (536)
T 3ni2_A 35 HSSKPCLINGANG-------DVYTYADVELTARRVASGLNKIGIQQGDVIMLFLPSSPEF-VLAFLGASHRGAIITAANP 106 (536)
T ss_dssp STTSEEEEETTTC-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHHTCEEEECCT
T ss_pred CCCceEEEECCCC-------CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHHhCCEEeccCC
Confidence 3556776643222 368989887776655544 4788999999988876543 345688888898888775
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
.+.+.++...++..++..++..+.....
T Consensus 107 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~ 134 (536)
T 3ni2_A 107 FSTPAELAKHAKASRAKLLITQACYYEK 134 (536)
T ss_dssp TCCHHHHHHHHHHHTEEEEEECGGGTHH
T ss_pred CCCHHHHHHHHHhcCCEEEEEChHHHHH
Confidence 5788899999999999999987655443
No 55
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=77.80 E-value=16 Score=35.36 Aligned_cols=94 Identities=12% Similarity=0.025 Sum_probs=71.3
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++. ....+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+.++
T Consensus 19 ~pd~~Al~~---------~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~Ga~~vpl~~ 88 (509)
T 3ivr_A 19 FPDRTAFMV---------DGVRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEM-IELIGAVALIGAILLPVNY 88 (509)
T ss_dssp STTSEEEEE---------TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCceEEEE---------CCcEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCCEEEecCC
Confidence 355677664 12578999988777665554 4788999999988876543 345688888999888876
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNM 289 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~ 289 (485)
.+...++...++..++..++..+.....
T Consensus 89 ~~~~~~l~~~l~~~~~~~vi~~~~~~~~ 116 (509)
T 3ivr_A 89 RLNADEIAFVLGDGAPSVVVAGTDYRDI 116 (509)
T ss_dssp TSCHHHHHHHHHHHCEEEEEECSTTHHH
T ss_pred CCCHHHHHHHHHhcCceEEEECcchhhh
Confidence 5788899999999999999987776554
No 56
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=77.27 E-value=22 Score=34.78 Aligned_cols=98 Identities=9% Similarity=0.034 Sum_probs=71.2
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.++++....+ ....+|.+.+...+..+.. ..++.++|++...++-+..+ ...+++++..|+..+..+ .
T Consensus 32 p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~~ 105 (541)
T 1v25_A 32 GRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRH-LEAYFAVPGMGAVLHTANPR 105 (541)
T ss_dssp TTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCTT
T ss_pred CCceEEEEecCC-----CCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHhcCcEEEecCcc
Confidence 456666543211 2357899988776655544 45788999999988866543 345678888899888775 5
Q ss_pred CCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 263 FDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
+.+.++...++..++..++..+.....+
T Consensus 106 ~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 133 (541)
T 1v25_A 106 LSPKEIAYILNHAEDKVLLFDPNLLPLV 133 (541)
T ss_dssp SCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred cCHHHHHHHHHhCCCcEEEEChhHHHHH
Confidence 7889999999999999999887765443
No 57
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=76.40 E-value=41 Score=33.48 Aligned_cols=98 Identities=14% Similarity=0.043 Sum_probs=71.8
Q ss_pred CCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHH-HHHhhhccCceEEecC
Q 036361 28 SDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYE-LQFGVPMSGAILNNIN 95 (485)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~-~~lA~~~~G~~~v~l~ 95 (485)
|+.+|++.. +..+|.+.+...+...... .++.++|++...+|-... +.. .+++.+..|+..+..+
T Consensus 183 ~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~~~ 259 (617)
T 3rg2_A 183 ADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEI---CQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAA 259 (617)
T ss_dssp TTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEECS
T ss_pred CCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHh---cCCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEEeC
Confidence 456666542 1569999887776665443 478999999999885543 332 4788888898888775
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHh
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVLEAL 129 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~ 129 (485)
. .....+...+++.++..+...+.....+.+..
T Consensus 260 ~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~ 292 (617)
T 3rg2_A 260 D-PSATLCFPLIEKHQVNVTALVPPAVSLWLQAL 292 (617)
T ss_dssp S-CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHH
T ss_pred C-CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhh
Confidence 4 57778888999999999999887777665543
No 58
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=75.53 E-value=9 Score=37.24 Aligned_cols=85 Identities=14% Similarity=0.085 Sum_probs=65.0
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCC--CCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTR--LDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (485)
..+|++.+...+..... ..++.++|++...+|-+.. .+..+++++..|+..+.+++. ..+..+...+++.++..
T Consensus 162 v~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 238 (512)
T 3fce_A 162 VQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQV 238 (512)
T ss_dssp EEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCE
T ss_pred EEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcE
Confidence 46999988876655543 3688999999999887533 344578888999998888653 46788889999999999
Q ss_pred EEEcCcchHHH
Q 036361 115 VFVDHLHSSLV 125 (485)
Q Consensus 115 ii~~~~~~~~~ 125 (485)
++..+.....+
T Consensus 239 ~~~~P~~~~~l 249 (512)
T 3fce_A 239 WTSTPSFAEMC 249 (512)
T ss_dssp EEECHHHHHHH
T ss_pred EEecHHHHHHH
Confidence 99887665543
No 59
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=74.90 E-value=27 Score=33.71 Aligned_cols=97 Identities=13% Similarity=0.069 Sum_probs=69.0
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++... .+..+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+..+
T Consensus 15 ~p~~~a~~~~~-------~~~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~ 86 (504)
T 1t5h_X 15 APDHCALAVPA-------RGLRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADV-VIAILALHRLGAVPALLNP 86 (504)
T ss_dssp CTTSEEEEETT-------TTEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHH-HHHHHHHHHHTCEEEEECT
T ss_pred CCCceEEEEcC-------CCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHhCcEEEecCC
Confidence 34566666421 13578999888776655544 4788999999988876553 345688888999888776
Q ss_pred cCCHHHHHHHHHhcCceeeec--chHHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCG--APVVLNMI 290 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~--~p~~~~~l 290 (485)
.+.+.++...++..+++.++. .+.....+
T Consensus 87 ~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~ 117 (504)
T 1t5h_X 87 RLKSAELAELIKRGEMTAAVIAVGRQVADAI 117 (504)
T ss_dssp TSCHHHHHHHHHHTTCSEEEECC--CHHHHH
T ss_pred ccChHHHHHHHhhcCCcEEEEecchhhhhhh
Confidence 577889999999999999888 55554443
No 60
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=74.77 E-value=16 Score=35.44 Aligned_cols=86 Identities=12% Similarity=0.021 Sum_probs=65.7
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCC--CCHHHHHHHhhhcCCcE
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTR--LDAHNLSVLLQHSESKL 114 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~--~~~~~l~~~l~~~~~~~ 114 (485)
..+|.+.+...+..++. ..++.++|++...+|-+.. .+..+++++..|+..+.++.. ..+..+...+++.++..
T Consensus 161 V~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~ 237 (511)
T 3e7w_A 161 VQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNV 237 (511)
T ss_dssp EEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSE
T ss_pred EEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcE
Confidence 46999998776665543 3688999999998887643 344578889999998887653 46778889999999999
Q ss_pred EEEcCcchHHHH
Q 036361 115 VFVDHLHSSLVL 126 (485)
Q Consensus 115 ii~~~~~~~~~~ 126 (485)
++..+.....+.
T Consensus 238 ~~~~P~~~~~l~ 249 (511)
T 3e7w_A 238 WTSTPSFVQMCL 249 (511)
T ss_dssp EEECHHHHHHHH
T ss_pred EEecHHHHHHHH
Confidence 999877665543
No 61
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=73.76 E-value=31 Score=33.96 Aligned_cols=100 Identities=12% Similarity=0.079 Sum_probs=72.1
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---h-CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---W-AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~-~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 261 (485)
.++.+|++.... .| ....+|.+.+...+..+... . ++.++|++...++-+..+ ...+++++..|+..+..+
T Consensus 56 ~p~~~al~~~~~--~g--~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Ga~~vpl~ 130 (570)
T 3c5e_A 56 RPPSPALWWVNG--KG--KELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPEW-WLVILGCIRAGLIFMPGT 130 (570)
T ss_dssp SCCCEEEEEECS--SS--CEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHHH-HHHHHHHHHHTCEEEECC
T ss_pred CCCceEEEEEcC--CC--ceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEecC
Confidence 456777765431 11 23578999887776555543 3 778999999988876543 345678888899888776
Q ss_pred -cCCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 262 -RFDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+.+.++...++..++..++..+.....+
T Consensus 131 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~ 160 (570)
T 3c5e_A 131 IQMKSTDILYRLQMSKAKAIVAGDEVIQEV 160 (570)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEETTTHHHH
T ss_pred CCCCHHHHHHHHHhcCCeEEEechHHHHHH
Confidence 57788999999999999999877665544
No 62
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=73.25 E-value=23 Score=35.05 Aligned_cols=99 Identities=5% Similarity=-0.055 Sum_probs=72.6
Q ss_pred cCCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHH--HHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYE--LQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~--~~lA~~~~G~~~v~l~ 95 (485)
.|+.+|++.. +..+|.+.+...+...+. ..++.++|++..++|-.-.+-. .+++.+..|+..+..+
T Consensus 165 ~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~~~ 241 (590)
T 3kxw_A 165 KSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIMMS 241 (590)
T ss_dssp CTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEECC
T ss_pred CCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEEeC
Confidence 3566776652 146999999887766644 4588999999999887755433 3788889999988876
Q ss_pred CCC---CHHHHHHHhhhcCCcEEEEcCcchHHHHHH
Q 036361 96 TRL---DAHNLSVLLQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 96 ~~~---~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
+.. .+..+...+++.++.++...+.....+.+.
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 277 (590)
T 3kxw_A 242 PFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKR 277 (590)
T ss_dssp HHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHH
T ss_pred HHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHH
Confidence 542 567788899999999998877666555443
No 63
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=72.44 E-value=31 Score=33.95 Aligned_cols=95 Identities=4% Similarity=-0.011 Sum_probs=70.2
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++.. .-.+|.+.+...+..+... .++.++|++...++-+..+ ...+++++..|+..+..+
T Consensus 52 ~p~~~Al~~~---------~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~-~~~~lA~~~~Gav~vpl~~ 121 (563)
T 1amu_A 52 RPNNVAIVCE---------NEQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDL-FIGILAVLKAGGAYVPIDI 121 (563)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEEeC---------CceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEEeCC
Confidence 3456666531 2368998887766555443 4788999999888866543 345678888999888776
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHHHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVLNMI 290 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 290 (485)
.+.+.++...++..++..++..+.....+
T Consensus 122 ~~~~~~l~~il~~~~~~~li~~~~~~~~~ 150 (563)
T 1amu_A 122 EYPKERIQYILDDSQARMLLTQKHLVHLI 150 (563)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECGGGHHHH
T ss_pred CCcHHHHHHHHHhcCCCEEEEcCchhhhh
Confidence 57888999999999999999887665543
No 64
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=72.24 E-value=26 Score=33.52 Aligned_cols=104 Identities=8% Similarity=0.017 Sum_probs=73.5
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHHh---CCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeeccc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALIDW---AVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLRR 262 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~~---~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~~ 262 (485)
.++.+|++.........-....+|.+.+...+..+...+ +. ++|++...++-+..+ ...+++++..|+..+.++.
T Consensus 37 ~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~-~~~~lA~~~~G~v~vpl~~ 114 (480)
T 3t5a_A 37 QPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEY-VVAFLGALQAGRIAVPLSV 114 (480)
T ss_dssp STTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEECS
T ss_pred CCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHH-HHHHHHHHHhCcEEEeeCC
Confidence 456777776542211111336799999988777766654 43 789998888766543 3456788889998887753
Q ss_pred ----CCHHHHHHHHHhcCceeeecchHHHHHHh
Q 036361 263 ----FDASAISDLIQKHNVTHMCGAPVVLNMIS 291 (485)
Q Consensus 263 ----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 291 (485)
....++...++..++..++..+.....+.
T Consensus 115 ~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~ 147 (480)
T 3t5a_A 115 PQGGVTDERSDSVLSDSSPVAILTTSSAVDDVV 147 (480)
T ss_dssp CCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHH
T ss_pred CCccchHHHHHHHHHhCCCCEEEeChhHHHHHH
Confidence 45688999999999999999887766554
No 65
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=71.41 E-value=27 Score=34.53 Aligned_cols=94 Identities=13% Similarity=0.104 Sum_probs=69.9
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++..... | ....+|.+.+...+..+.. ..++.++|++...++-+..+ +..+++++..|+..+..+
T Consensus 69 ~pd~~Al~~~~~~--g--~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~-~~~~lA~~~~Gav~vpl~~ 143 (580)
T 3etc_A 69 SPEKLAMIWCDDY--G--NEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDF-WYCMLGLHKLGAIAVPATH 143 (580)
T ss_dssp CTTCEEEEEEESS--S--CEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHH-HHHHHHHHHHTCEEEECCT
T ss_pred CCCCEEEEEEcCC--C--CEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHH-HHHHHHHHhCCEEEEeCCc
Confidence 4667888765321 2 2467899888776655554 45789999999998876553 345678888898888775
Q ss_pred cCCHHHHHHHHHhcCceeeecch
Q 036361 262 RFDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p 284 (485)
.+.+.++...++..++..++..+
T Consensus 144 ~~~~~~l~~~l~~~~~~~ii~~~ 166 (580)
T 3etc_A 144 MLKTRDIVYRIEKAGLKMIVCIA 166 (580)
T ss_dssp TCCHHHHHHHHHHHTCCEEEEES
T ss_pred cCCHHHHHHHHHhcCCCEEEEec
Confidence 57889999999999999988754
No 66
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=70.40 E-value=31 Score=33.29 Aligned_cols=79 Identities=6% Similarity=-0.068 Sum_probs=61.9
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+...... .++.++|++...++-+..+ ...+++++..|+..+..+ .+...++...++..++..++.
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~ 106 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEA-LVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIVVC 106 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHH-HHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEEEE
T ss_pred EEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEEEE
Confidence 58999887776655544 4788999999888876543 345788889999888776 578889999999999999998
Q ss_pred chHH
Q 036361 283 APVV 286 (485)
Q Consensus 283 ~p~~ 286 (485)
.+..
T Consensus 107 ~~~~ 110 (503)
T 4fuq_A 107 DPSK 110 (503)
T ss_dssp CGGG
T ss_pred Cchh
Confidence 7653
No 67
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=69.63 E-value=15 Score=33.36 Aligned_cols=65 Identities=11% Similarity=0.036 Sum_probs=50.0
Q ss_pred HHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 56 LSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 56 L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
+.+.| +++|++|.+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34455 488998766667788888888899999988776666655556677889999999999764
No 68
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=67.81 E-value=23 Score=34.41 Aligned_cols=81 Identities=6% Similarity=-0.056 Sum_probs=62.5
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+...... .++.++|++...++-+..+ ...+++++..|+..+..+ .+.+.++...++..++..++.
T Consensus 48 ~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~ 126 (529)
T 2v7b_A 48 STTYGELEERARRFASALRTLGVHPEERILLVMLDTVAL-PVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVIA 126 (529)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHH-HHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEE
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHHcCceEEecCcccCHHHHHHHHhccCCeEEEe
Confidence 58888887776655543 4788999999988876543 345678888898888775 578889999999999999988
Q ss_pred chHHHH
Q 036361 283 APVVLN 288 (485)
Q Consensus 283 ~p~~~~ 288 (485)
.+....
T Consensus 127 ~~~~~~ 132 (529)
T 2v7b_A 127 SGALVQ 132 (529)
T ss_dssp EGGGHH
T ss_pred chhhhh
Confidence 766543
No 69
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=67.59 E-value=42 Score=33.71 Aligned_cols=94 Identities=17% Similarity=0.082 Sum_probs=68.6
Q ss_pred CCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH---HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-c
Q 036361 187 EWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI---DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-R 262 (485)
Q Consensus 187 ~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~ 262 (485)
++.+|++.... .+| ....+|.+.+...+..+.. ..++.++|++...+|....+ ...+++++..|+..+.++ .
T Consensus 90 pd~~Al~~~~~-~~~--~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~-vva~lA~~~~Gav~vpl~~~ 165 (652)
T 1pg4_A 90 GDRTAIIWEGD-DTS--QSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEA-AVAMLACARIGAVHSVIFGG 165 (652)
T ss_dssp TTSEEEEEECS-STT--CEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHH-HHHHHHHHHHTCEEEECCTT
T ss_pred CCceEEEEEcC-CCC--ceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHcCcEEEecCCC
Confidence 55677765322 122 2357899888776655544 45789999999999876553 345688888898887775 6
Q ss_pred CCHHHHHHHHHhcCceeeecch
Q 036361 263 FDASAISDLIQKHNVTHMCGAP 284 (485)
Q Consensus 263 ~~~~~~~~~i~~~~~t~~~~~p 284 (485)
+.+.++...++..++..++...
T Consensus 166 ~~~~~l~~~l~~~~~~~li~~~ 187 (652)
T 1pg4_A 166 FSPEAVAGCIIDSSSRLVITAD 187 (652)
T ss_dssp SCHHHHHHHHHHHTCSEEEEES
T ss_pred CCHHHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999888754
No 70
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=65.80 E-value=43 Score=32.92 Aligned_cols=92 Identities=7% Similarity=-0.087 Sum_probs=68.7
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++.. .-.+|.+.+...+...... .++.++|++...++-+..+ ...+++++..|+..+.++
T Consensus 88 ~pd~~A~~~~---------~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~vpl~~ 157 (570)
T 4gr5_A 88 APDAVALLHE---------ADELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDM-VVALLAVLKAGGGYTMLDP 157 (570)
T ss_dssp CTTSEEEEET---------TEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEECCT
T ss_pred CCCCeEEECC---------CCcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHHCCEEEEcCC
Confidence 4556776641 2368999887776655543 4788999999998876553 345688889999888776
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVL 287 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~ 287 (485)
...+.++...++..++..++......
T Consensus 158 ~~~~~~l~~~l~~~~~~~~i~~~~~~ 183 (570)
T 4gr5_A 158 QFPVERLALSLEDTGAPLLVTSRPLS 183 (570)
T ss_dssp TSCHHHHHHHHHHHTCSEEEECTTTT
T ss_pred CChHHHHHHHHHhcCCCEEEecchhh
Confidence 57889999999999999998876543
No 71
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=64.90 E-value=44 Score=33.69 Aligned_cols=96 Identities=10% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHH----HhCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALI----DWAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~----~~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~ 261 (485)
.++.+|++.... .+| ....+|.+.+...+..+.. ..++.++|++...+|....+ ...+++++..|+..+.+.
T Consensus 95 ~pd~~Al~~~~~-~~~--~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~-v~a~lA~~~~Gav~vpl~ 170 (663)
T 1ry2_A 95 TPNKKAIIFEGD-EPG--QGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEA-IITLLAISRIGAIHSVVF 170 (663)
T ss_dssp CTTSEEEEEECS-STT--CCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHH-HHHHHHHHHTTCEEEECC
T ss_pred CCCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEeeC
Confidence 456777765432 122 2356898888776655443 45688999999999876553 345688888898877765
Q ss_pred -cCCHHHHHHHHHhcCceeeecchH
Q 036361 262 -RFDASAISDLIQKHNVTHMCGAPV 285 (485)
Q Consensus 262 -~~~~~~~~~~i~~~~~t~~~~~p~ 285 (485)
.+.+.++...++..++.+++....
T Consensus 171 ~~~~~~~l~~~l~~~~~~~li~~~~ 195 (663)
T 1ry2_A 171 AGFSSNSLRDRINDGDSKVVITTDE 195 (663)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEEESB
T ss_pred CCCCHHHHHHHHHhcCCeEEEEccc
Confidence 688999999999999999987654
No 72
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=63.86 E-value=23 Score=32.27 Aligned_cols=91 Identities=10% Similarity=0.061 Sum_probs=63.8
Q ss_pred CCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 29 DCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 29 ~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
-++.+-..+ .+=||++ +...+.+.....+--+++|.+..+....+-.-+.+.++|.++|..+..+=|...+..-...
T Consensus 50 ~~IylK~E~lnptGSfK~-RgA~~~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~ 128 (344)
T 3vc3_A 50 AYVAVKQEMMQPTASIAD-RPAYAMITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVT 128 (344)
T ss_dssp SEEEEEEGGGSTTSBTTH-HHHHHHHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHH
T ss_pred CEEEEEecCCCCCCCcHH-HHHHHHHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHH
Confidence 344444433 3345542 2333444444444346888877778888889999999999999988777777777777888
Q ss_pred hhhcCCcEEEEcCc
Q 036361 107 LQHSESKLVFVDHL 120 (485)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (485)
++..++++++++..
T Consensus 129 ~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 129 MRAFGAELILTDPA 142 (344)
T ss_dssp HHHTTCEEEEECGG
T ss_pred HHHcCCEEEEECCC
Confidence 99999999999753
No 73
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=61.76 E-value=24 Score=37.60 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=69.9
Q ss_pred CCCCcEEEEecCCCCCCcccEEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-
Q 036361 186 SEWDPMVLNYTSGTTSSPKGVVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR- 261 (485)
Q Consensus 186 ~~~~~~~i~~TSGtTG~pK~v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~- 261 (485)
.++.+|++...+| ..+|.+.+...+..+... .++.++|++...++-+..+ +..+++++..|+..+.++
T Consensus 74 ~pd~~Al~~~~~~-------~~~TY~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~ns~e~-~v~~lA~~~~Ga~~vpl~~ 145 (979)
T 3tsy_A 74 FATKPCLINGPTG-------HVYTYSDVHVISRQIAANFHKLGVNQNDVVMLLLPNCPEF-VLSFLAASFRGATATAANP 145 (979)
T ss_dssp TTTSEEEEETTTC-------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECSSCHHH-HHHHHHHHHHTCEEEEECT
T ss_pred CCCCeEEEECCCC-------cEEEHHHHHHHHHHHHHHHHHcCCCCcCEEEEEeCCCHHH-HHHHHHHHHcCCEEEeeCC
Confidence 4567777653222 468888887766555544 4788999999998876543 345688888999888775
Q ss_pred cCCHHHHHHHHHhcCceeeecchHHH
Q 036361 262 RFDASAISDLIQKHNVTHMCGAPVVL 287 (485)
Q Consensus 262 ~~~~~~~~~~i~~~~~t~~~~~p~~~ 287 (485)
.+.+.++...++..++..++..+...
T Consensus 146 ~~~~~~l~~~l~~~~~~~vi~~~~~~ 171 (979)
T 3tsy_A 146 FFTPAEIAKQAKASNTKLIITEARYV 171 (979)
T ss_dssp TSCHHHHHHHHHHHTEEEEEECSTTT
T ss_pred CCCHHHHHHHHHHcCCeEEEEChHHH
Confidence 57889999999999999999876543
No 74
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=58.19 E-value=47 Score=33.11 Aligned_cols=113 Identities=14% Similarity=0.050 Sum_probs=75.8
Q ss_pred CCCcEEEeC---------CeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhH-HHHHHhhhccCceEEecC-C
Q 036361 28 SDCPSIVYN---------NTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSM-YELQFGVPMSGAILNNIN-T 96 (485)
Q Consensus 28 p~~~a~~~~---------~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~-~~~~lA~~~~G~~~v~l~-~ 96 (485)
|+.+|++.. +..+|.+.+...+.. ....++.++|++....|-+.+. +..+++.+..|+..+..+ .
T Consensus 163 ~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~~~~ 238 (620)
T 4dg8_A 163 ADQIAYINFSSGTTGRPKAIACTHAGITRLCLG----QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLNDLG 238 (620)
T ss_dssp TTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS----CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCSS
T ss_pred CCCeEEEEECCCccccCeEEEEchHHHHHHHHH----HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeCccc
Confidence 566776542 146898887544322 2236889999999998876443 445788888998887764 3
Q ss_pred CCCHHHHHHHhhhcCCcEEEEcCcchHHHHHHhccCCCCCCCCeEEEecC
Q 036361 97 RLDAHNLSVLLQHSESKLVFVDHLHSSLVLEALSLFPRDTKRPHLVLVDD 146 (485)
Q Consensus 97 ~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 146 (485)
...++.+...+++.++..++..+.....+.+..... ....+.+++-++
T Consensus 239 ~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~--l~~lr~v~~gGe 286 (620)
T 4dg8_A 239 PLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDC--LGGLRQLLTGGD 286 (620)
T ss_dssp SCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGGG--GTTCSEEEEESS
T ss_pred cCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChhh--CCCccEEEEEeC
Confidence 467889999999999999999887766655432211 124455555444
No 75
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=57.35 E-value=58 Score=31.47 Aligned_cols=78 Identities=8% Similarity=-0.101 Sum_probs=59.5
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeee
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMC 281 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 281 (485)
-.+|.+.+...+...... .++.+++++...++-+..+ +..+++++..|+..+.++ ...+.++...++..++..++
T Consensus 28 ~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii 106 (521)
T 3l8c_A 28 ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDM-LATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLII 106 (521)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHH-HHHHHHHHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEE
T ss_pred CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHH-HHHHHHHHHhCCEEEecCccccHHHHHHHHHhCCCCEEE
Confidence 358899887776665544 4788999988888765543 345678888898888775 57889999999999999988
Q ss_pred cch
Q 036361 282 GAP 284 (485)
Q Consensus 282 ~~p 284 (485)
...
T Consensus 107 ~~~ 109 (521)
T 3l8c_A 107 AIE 109 (521)
T ss_dssp ESS
T ss_pred ecC
Confidence 654
No 76
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=56.93 E-value=61 Score=31.21 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=68.5
Q ss_pred cCCCcEEEeC--C-------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchh--HHHHHHhhhccCceEEecC
Q 036361 27 YSDCPSIVYN--N-------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPS--MYELQFGVPMSGAILNNIN 95 (485)
Q Consensus 27 ~p~~~a~~~~--~-------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~--~~~~~lA~~~~G~~~v~l~ 95 (485)
.|+.+|++.. + ..+|.+.+...+..++..+ ++.++|++...+|-.-. ++..+++.+..|+..+..+
T Consensus 153 ~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~ 229 (505)
T 3nyq_A 153 DDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHLG 229 (505)
T ss_dssp CTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEECS
T ss_pred CCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEECC
Confidence 3556666542 1 4699999988877766544 78899998888876432 3345788889999988774
Q ss_pred CCCCHHHHHHHhhhcCCcEEEEcCcchHHHHH
Q 036361 96 TRLDAHNLSVLLQHSESKLVFVDHLHSSLVLE 127 (485)
Q Consensus 96 ~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~ 127 (485)
...++.+...+ +.++..++..+.....+.+
T Consensus 230 -~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 230 -RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp -SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred -CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 56677777777 6789999988776665544
No 77
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=49.59 E-value=81 Score=30.81 Aligned_cols=84 Identities=6% Similarity=-0.039 Sum_probs=63.1
Q ss_pred EEeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCC-------HHHHHHHHHh
Q 036361 206 VVHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFD-------ASAISDLIQK 274 (485)
Q Consensus 206 v~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~-------~~~~~~~i~~ 274 (485)
-.+|.+.+...+...... .++.++|++...++-+..+ ...+++++..|+..+.++ .+. ..++...++.
T Consensus 48 ~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~ 126 (576)
T 3gqw_A 48 DQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSSEF-VEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLAS 126 (576)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSHHH-HHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHH
T ss_pred eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHH-HHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHh
Confidence 578999988777665544 4788999999998876543 345688889998888775 333 5788889999
Q ss_pred cCceeeecchHHHHHH
Q 036361 275 HNVTHMCGAPVVLNMI 290 (485)
Q Consensus 275 ~~~t~~~~~p~~~~~l 290 (485)
.++..++........+
T Consensus 127 ~~~~~ii~~~~~~~~~ 142 (576)
T 3gqw_A 127 CQPAAIITGDEWLPLV 142 (576)
T ss_dssp HCCSEEEECGGGHHHH
T ss_pred cCCCEEEecHHHHHHH
Confidence 9999998877655443
No 78
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=46.01 E-value=65 Score=30.33 Aligned_cols=63 Identities=24% Similarity=0.162 Sum_probs=48.8
Q ss_pred HHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 57 SSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 57 ~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.+.| +++|....+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 3456 47786666666778888888889999999877766666566667788999999999975
No 79
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=45.73 E-value=75 Score=28.28 Aligned_cols=64 Identities=9% Similarity=0.051 Sum_probs=45.6
Q ss_pred HHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 56 LSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 56 L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
+.+.|. ++|+.|.. ...+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 58 a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 58 AEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 334454 67776654 66667777777888899988777666554555667788999999999863
No 80
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=44.56 E-value=63 Score=29.19 Aligned_cols=78 Identities=9% Similarity=0.094 Sum_probs=51.7
Q ss_pred eeeHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 39 TYTWSETHRRCLQ--VA-SSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 39 ~~Ty~~l~~~~~~--lA-~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
.+++.+..-.... .| +.|...++++|++|.|....+.-..++++|....|+.++.++.. ++. ..+.+..++..+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~--~~r-~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN--QDK-LNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC--HHH-HHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc--HHH-hhhhhhcCCeEE
Confidence 3666654332222 22 23445799999999999888787888888877778877776543 333 456677888887
Q ss_pred EEcC
Q 036361 116 FVDH 119 (485)
Q Consensus 116 i~~~ 119 (485)
+-..
T Consensus 213 i~~~ 216 (348)
T 4eez_A 213 INSG 216 (348)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 7643
No 81
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=44.19 E-value=1.3e+02 Score=26.54 Aligned_cols=63 Identities=16% Similarity=0.096 Sum_probs=44.6
Q ss_pred HHcC-CCCCC--EEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 57 SSVG-IQRGH--VVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 57 ~~~g-i~~gd--~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.+.| +++|+ .|.. ...+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 52 ~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 52 EERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3444 56776 4433 56667777777888899988776655544556667889999999999865
No 82
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=42.94 E-value=50 Score=30.38 Aligned_cols=60 Identities=12% Similarity=0.067 Sum_probs=35.8
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcC--CcEEEEc
Q 036361 56 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSE--SKLVFVD 118 (485)
Q Consensus 56 L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~--~~~ii~~ 118 (485)
|...++++||.|.+-.+...-+. -++...|+.++.++.+ .+.+.+...+..-+ .++|+..
T Consensus 70 l~~l~~~~Gd~Vi~~~~~~~~~~---~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~~ 136 (377)
T 3ju7_A 70 IQLKKRKKGKYALMPSFTFPATP---LAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVPY 136 (377)
T ss_dssp HHHHSCTTCCEEEEESSSCTHHH---HHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECCB
T ss_pred HHHcCCCCcCEEEECCCCcHHHH---HHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEEE
Confidence 44456788888877766655433 3345667776655432 36677777664333 6666643
No 83
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=42.82 E-value=86 Score=27.83 Aligned_cols=63 Identities=13% Similarity=0.057 Sum_probs=45.0
Q ss_pred HHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 57 SSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 57 ~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.+.|. ++|+.|.. ...+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 57 ~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 57 EKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34454 67765544 66677777788888899988776655544455566789999999999864
No 84
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=42.17 E-value=55 Score=32.01 Aligned_cols=86 Identities=5% Similarity=-0.185 Sum_probs=63.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHH-----cCCCCCCEEEEEcCCchh-HHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcC
Q 036361 38 TTYTWSETHRRCLQVASSLSS-----VGIQRGHVVSVVAPNVPS-MYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSE 111 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~-----~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 111 (485)
..+|.+.+...+..++..+.. ..+...+++....+...+ .+..++..+..|+..+........+.+...+++.+
T Consensus 193 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (562)
T 3ite_A 193 VRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELG 272 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTT
T ss_pred EEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcC
Confidence 459999999888888776652 457778888777776544 33446777888988877654444567788899999
Q ss_pred CcEEEEcCcchH
Q 036361 112 SKLVFVDHLHSS 123 (485)
Q Consensus 112 ~~~ii~~~~~~~ 123 (485)
+..++..+....
T Consensus 273 ~t~~~~~P~~l~ 284 (562)
T 3ite_A 273 VTHAGIVPSLLD 284 (562)
T ss_dssp CCEEEECHHHHH
T ss_pred CCEEEcCHHHHh
Confidence 999998776443
No 85
>1toa_A Tromp-1, protein (periplasmic binding protein TROA); zinc binding protein, ABC trans binding protein; 1.80A {Treponema pallidum} SCOP: c.92.2.2 PDB: 1k0f_A
Probab=41.76 E-value=82 Score=28.16 Aligned_cols=87 Identities=13% Similarity=0.211 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHH---HHHhhhcCCcEEEE
Q 036361 43 SETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNL---SVLLQHSESKLVFV 117 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~--~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l---~~~l~~~~~~~ii~ 117 (485)
+++.++...+-..+++ ..++...+..+...+...++.-.|++-..|..-+.=....++.++ ...+++.++++||+
T Consensus 173 ~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 252 (313)
T 1toa_A 173 QAYQQQLDKLDAYVRRKAQSLPAERRVLVTAHDAFGYFSRAYGFEVKGLQGVSTASEASAHDMQELAAFIAQRKLPAIFI 252 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCGGGCEEEEEESCCHHHHHHHTCEEEEEECSSCSSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhCCccCCEEEEECCcHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 4455555555555544 245444566677778899999999988766432111223355554 55567789999999
Q ss_pred cCcchHHHHHHh
Q 036361 118 DHLHSSLVLEAL 129 (485)
Q Consensus 118 ~~~~~~~~~~~~ 129 (485)
+........+.+
T Consensus 253 e~~~~~~~~~~l 264 (313)
T 1toa_A 253 ESSIPHKNVEAL 264 (313)
T ss_dssp ETTSCTHHHHHH
T ss_pred eCCCChHHHHHH
Confidence 987766654444
No 86
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=40.55 E-value=77 Score=28.55 Aligned_cols=59 Identities=12% Similarity=0.199 Sum_probs=36.8
Q ss_pred CCCCCCEEEEEcCCch------hHHHHHHh-hhccCceEEecCCCC------------CHHHHHHHhhhcCCcEEEEc
Q 036361 60 GIQRGHVVSVVAPNVP------SMYELQFG-VPMSGAILNNINTRL------------DAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~------~~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~ 118 (485)
-+++||+|+|+.|.+. +-+-.... +-..|..++.-+... ..+++..++..-.++.|++.
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~ 85 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTV 85 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEES
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEc
Confidence 5789999999999852 22222222 234577665442221 24566777778888899985
No 87
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=40.20 E-value=52 Score=27.55 Aligned_cols=94 Identities=13% Similarity=0.085 Sum_probs=0.0
Q ss_pred CCCCEEEEecch-hhHhHHHHHHHHHhhcceEeec--ccCCHHHHHHHHHhcCceeeec------chHH--HHHHhCCCC
Q 036361 227 PKQPVYLWTLPM-FHANGWGYTWGMAAVGATNICL--RRFDASAISDLIQKHNVTHMCG------APVV--LNMISNSPD 295 (485)
Q Consensus 227 ~~~~~~~~~~p~-~~~~g~~~~~~~l~~G~~~~~~--~~~~~~~~~~~i~~~~~t~~~~------~p~~--~~~l~~~~~ 295 (485)
..+.+++.+.+- .|..|...+-..+...+.-++. ....++.+.+.+++++++.+.+ ++.+ +..+.+..+
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~ 170 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLN 170 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHH
Q ss_pred CCCCCCCceEEeccCCCChhhhhhh
Q 036361 296 FEPLKTPVQILTAGAPPPAPVLSRT 320 (485)
Q Consensus 296 ~~~l~~lr~i~~~g~~l~~~~~~~~ 320 (485)
...+..--.+++||.+++++..+.+
T Consensus 171 ~~~~~~~v~v~vGG~~~~~~~a~~i 195 (215)
T 3ezx_A 171 EEKLRDSVKCMFGGAPVSDKWIEEI 195 (215)
T ss_dssp HTTCGGGSEEEEESSSCCHHHHHHH
T ss_pred HcCCCCCCEEEEECCCCCHHHHHHh
No 88
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=39.94 E-value=79 Score=27.74 Aligned_cols=87 Identities=6% Similarity=0.077 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHH---HHHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNL---SVLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~--~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l---~~~l~~~~~~~ii 116 (485)
++++.++...+-..+++ ..+.++.+..+...+...++.-.|++-..|..-+.=...-++.++ ...+++.++++||
T Consensus 138 ~~~~~~~L~~ld~~~~~~l~~~~~~~~~~vt~H~af~Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if 217 (282)
T 3mfq_A 138 TEKYQAQLDDLHAWVEKELSVIPKESRYLVTPHDAFNYFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIF 217 (282)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGCEEECSSSCCHHHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCccCcEEEEECchHHHHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 44555566666666655 245446778888888899999999888776432211122345554 5566778999999
Q ss_pred EcCcchHHHHHH
Q 036361 117 VDHLHSSLVLEA 128 (485)
Q Consensus 117 ~~~~~~~~~~~~ 128 (485)
+++....+..+.
T Consensus 218 ~e~~~~~~~~~~ 229 (282)
T 3mfq_A 218 TESTTNPERMKK 229 (282)
T ss_dssp CBTTSCTHHHHH
T ss_pred EeCCCChHHHHH
Confidence 988776654443
No 89
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=39.69 E-value=92 Score=28.20 Aligned_cols=62 Identities=10% Similarity=0.049 Sum_probs=43.8
Q ss_pred HcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 58 SVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 58 ~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
+.| +++|+.|.-. ..+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 71 ~~g~~~~g~~vv~a-SsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 71 KDGRLKPGMEIIES-TSGNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHTSSCTTCEEEEE-CSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HcCCCCCCCEEEEE-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 345 4677765555 4466666777778889987776655555555667889999999999863
No 90
>3ujp_A Mn transporter subunit; manganese binding protein, metal binding protein; 2.70A {Synechocystis SP} PDB: 1xvl_A 3v63_A
Probab=38.89 E-value=89 Score=27.85 Aligned_cols=86 Identities=9% Similarity=0.056 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC--CCHHH---HHHHhhhcCCcE
Q 036361 42 WSETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--LDAHN---LSVLLQHSESKL 114 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~--~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~ 114 (485)
++++.++...+-..+++ ..+....+..+...+...++.-.|++-..+. ..+.+. -++.+ +...+++.++++
T Consensus 165 a~~~~~~L~~Ld~~~~~~l~~~p~~~~~~v~~H~af~Yfa~~yGl~~~~~--~~i~~~~ePs~~~l~~l~~~ik~~~v~~ 242 (307)
T 3ujp_A 165 AAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVPT 242 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSCCSSCCCHHHHHHHHHHHHTTTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccCCEEEEECchHHHHHHHCCCcEEEe--eccCCCCCCCHHHHHHHHHHHHhcCCcE
Confidence 34555566666666655 2444455677777888999999999886643 234433 34444 556677889999
Q ss_pred EEEcCcchHHHHHHh
Q 036361 115 VFVDHLHSSLVLEAL 129 (485)
Q Consensus 115 ii~~~~~~~~~~~~~ 129 (485)
||++.....+..+.+
T Consensus 243 If~e~~~~~k~~~~i 257 (307)
T 3ujp_A 243 IFCESTVSDKGQKQV 257 (307)
T ss_dssp EEEETTSCSHHHHHT
T ss_pred EEEeCCCChHHHHHH
Confidence 999987666544443
No 91
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=38.63 E-value=1.3e+02 Score=26.65 Aligned_cols=61 Identities=13% Similarity=0.164 Sum_probs=44.2
Q ss_pred HcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 58 SVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 58 ~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+.| +++|+.|.-.. .+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 54 ~~g~~~~g~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~ 115 (303)
T 2v03_A 54 KRGEIKPGDVLIEAT-SGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTK 115 (303)
T ss_dssp HTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 345 46777665554 56666677777889998877766655555566788999999999986
No 92
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=38.50 E-value=1.3e+02 Score=27.39 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=34.3
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEEc
Q 036361 60 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~~ 118 (485)
++++||.|.+..+....... ++...|+.++.++.+ ...+.+...++. +.++|++.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 67889988887776555443 344567665554432 356777777754 56666663
No 93
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=38.43 E-value=1.1e+02 Score=27.29 Aligned_cols=64 Identities=19% Similarity=0.150 Sum_probs=46.5
Q ss_pred HHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 57 SSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 57 ~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.+.| +++|....+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3445 466754445566777778888888999988777666555555667889999999999854
No 94
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=38.26 E-value=59 Score=22.00 Aligned_cols=46 Identities=9% Similarity=-0.005 Sum_probs=33.6
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+.+.+|.+ .+.+.++.++..|.++|..+.....+...+...|..
T Consensus 22 ~~ip~~~l~~-------~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKE-------RIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHH-------HHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHH-------HHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 4566766654 344557788899999999988777777777777753
No 95
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=38.01 E-value=51 Score=29.98 Aligned_cols=59 Identities=8% Similarity=0.104 Sum_probs=43.0
Q ss_pred CCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 63 RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 63 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
+.+. .+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++....
T Consensus 75 ~~~~-vv~~SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~~ 133 (346)
T 3l6b_A 75 KPKA-VVTHSSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDE 133 (346)
T ss_dssp CCSC-EEEECSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCE-EEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCHH
Confidence 3344 3444567777778888999998877666666666667888999999999987543
No 96
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=37.73 E-value=91 Score=28.21 Aligned_cols=60 Identities=13% Similarity=0.239 Sum_probs=37.0
Q ss_pred CCCCCCEEEEEcCCchh------HHHHHHh-hhccCceEEecCCCC------------CHHHHHHHhhhcCCcEEEEcC
Q 036361 60 GIQRGHVVSVVAPNVPS------MYELQFG-VPMSGAILNNINTRL------------DAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~------~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~ 119 (485)
-+++||+|+|+.|.+.- -+-.... +-..|..++.-.... ..+++..++..-.++.|+|..
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~r 87 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTI 87 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 57899999999998832 2222222 234687766532111 134566677777888888853
No 97
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=37.61 E-value=1.1e+02 Score=27.56 Aligned_cols=7 Identities=14% Similarity=0.430 Sum_probs=3.3
Q ss_pred cEEeccH
Q 036361 205 GVVHSHR 211 (485)
Q Consensus 205 ~v~~s~~ 211 (485)
|+++..+
T Consensus 211 G~~~~~~ 217 (384)
T 1eg5_A 211 GITYIRK 217 (384)
T ss_dssp EEEEECT
T ss_pred EEEEEcC
Confidence 4555444
No 98
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=37.23 E-value=94 Score=27.88 Aligned_cols=86 Identities=9% Similarity=0.056 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC--CCHHHH---HHHhhhcCCcE
Q 036361 42 WSETHRRCLQVASSLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--LDAHNL---SVLLQHSESKL 114 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~--~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~l---~~~l~~~~~~~ 114 (485)
++++.++...+-..+++ ..+....+..+...+...++.-.|++-..|. ..+++. -++.++ ...+++.++++
T Consensus 179 a~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H~af~Yfa~~yGL~~~~~--~~~~~~~eps~~~l~~l~~~ik~~~v~~ 256 (321)
T 1xvl_A 179 AAVYSEQLKAIDRQLGADLEQVPANQRFLVSCEGAFSYLARDYGMEEIYM--WPINAEQQFTPKQVQTVIEEVKTNNVPT 256 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEESTTHHHHHHTTCEEEEE--ESSSSSCSCCHHHHHHHHHHHHTTTCSE
T ss_pred HHHHHHHHHHHHHHHHHHHhhCcccCCEEEEECchHHHHHHHCCCeEEEe--eccCCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 34455555555555554 2343344566777778999999999887763 334333 345554 55567789999
Q ss_pred EEEcCcchHHHHHHh
Q 036361 115 VFVDHLHSSLVLEAL 129 (485)
Q Consensus 115 ii~~~~~~~~~~~~~ 129 (485)
||++........+.+
T Consensus 257 If~e~~~~~~~~~~i 271 (321)
T 1xvl_A 257 IFCESTVSDKGQKQV 271 (321)
T ss_dssp EEEETTSCSHHHHHH
T ss_pred EEEeCCCChHHHHHH
Confidence 999987776654444
No 99
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=37.04 E-value=66 Score=28.46 Aligned_cols=84 Identities=17% Similarity=0.167 Sum_probs=53.8
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC--CCHHH---HHHHhhhcCCcE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--LDAHN---LSVLLQHSESKL 114 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--~~~~~---l~~~l~~~~~~~ 114 (485)
++++.++...+-..+++. .++.+.+..+...+...++.--|++-..+.. -+.+. -++.+ +...+++.++++
T Consensus 158 ~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 235 (294)
T 3hh8_A 158 LKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSEGCFKYFSKAYGVPSAYIW--EINTEEEGTPDQISSLIEKLKVIKPSA 235 (294)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEESCCHHHHHHHTCCEEEEE--SSCCSCCCCHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCccCcEEEEECChHHHHHHHcCCceeecc--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 445555566666666552 4433346666777899999999998876532 23332 34544 455667789999
Q ss_pred EEEcCcchHHHHH
Q 036361 115 VFVDHLHSSLVLE 127 (485)
Q Consensus 115 ii~~~~~~~~~~~ 127 (485)
||++.....+..+
T Consensus 236 if~e~~~~~~~~~ 248 (294)
T 3hh8_A 236 LFVESSVDRRPME 248 (294)
T ss_dssp EEEETTSCSHHHH
T ss_pred EEEeCCCCcHHHH
Confidence 9998876655433
No 100
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=36.97 E-value=1.2e+02 Score=27.74 Aligned_cols=58 Identities=14% Similarity=0.185 Sum_probs=35.1
Q ss_pred cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhc--CCcEEEEcC
Q 036361 59 VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHS--ESKLVFVDH 119 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~ii~~~ 119 (485)
.++++||.|.+..+....+... +...|+.++.++.+ ...+.+...++.. ++++|++..
T Consensus 67 l~~~~gd~Vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 67 AGVKQDDIVLASSFTFIASVAP---ICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp TTCCTTCEEEEESSSCGGGTHH---HHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred cCCCCCCEEEECCCccHHHHHH---HHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 3567888888777766554432 23367666555432 3567777777653 466666643
No 101
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=36.41 E-value=1.2e+02 Score=28.48 Aligned_cols=61 Identities=13% Similarity=0.064 Sum_probs=35.0
Q ss_pred EEEcCCchhHHH-HHHhhhccCceEEecCCCCCHHH--HHHHhhhcCCcEEEEcCcchHHHHHH
Q 036361 68 SVVAPNVPSMYE-LQFGVPMSGAILNNINTRLDAHN--LSVLLQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 68 ~l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~--l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
++++.++.+.+. ++.++.+.|-.++.-++....-. +...+...++++++++....+.+.+.
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~a 163 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHA 163 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHH
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHh
Confidence 455666655544 34456666766655555554321 22256677888888876655555444
No 102
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=36.05 E-value=98 Score=28.46 Aligned_cols=61 Identities=10% Similarity=0.132 Sum_probs=37.9
Q ss_pred cCCCCCCEEEEEcCCchh------HHHHHHh-hhccCceEEecCCCC------------CHHHHHHHhhhcCCcEEEEcC
Q 036361 59 VGIQRGHVVSVVAPNVPS------MYELQFG-VPMSGAILNNINTRL------------DAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 59 ~gi~~gd~V~l~~~~~~~------~~~~~lA-~~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.-+++||+|+|+.|.+.- -+-.... +-..|..++.-+... ..+++..++..-.++.|+|..
T Consensus 38 ~~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~r 117 (371)
T 3tla_A 38 APLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTI 117 (371)
T ss_dssp CCCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESC
T ss_pred CCCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcc
Confidence 468999999999998742 2222222 234687766542211 234566677777788888853
No 103
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=35.38 E-value=1.1e+02 Score=29.79 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=46.5
Q ss_pred HcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 58 SVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 58 ~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+.| +++|++|.- ...+-.-..+.++|.+.|..++.+-|...+..-...++..+++++++..
T Consensus 106 ~~g~~~~g~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 106 EQGLLKPGYTIIE-PTSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEE-eCCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 445 578887754 5667777888889999998877666665556667888999999999975
No 104
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=34.79 E-value=1.1e+02 Score=25.05 Aligned_cols=52 Identities=21% Similarity=0.337 Sum_probs=36.0
Q ss_pred CCCCCCEEEEEcCCch--hHHHHHHhhhccCceEEecCCCC--CHHHHHHHhhhcCC
Q 036361 60 GIQRGHVVSVVAPNVP--SMYELQFGVPMSGAILNNINTRL--DAHNLSVLLQHSES 112 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~--~~~~~~lA~~~~G~~~v~l~~~~--~~~~l~~~l~~~~~ 112 (485)
|+.+|+.+++..+++. ..++..+|. ..|..++.++... +.+++..+.+..+.
T Consensus 16 gi~~G~~~~i~G~~GsGKTtl~~~l~~-~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 71 (220)
T 2cvh_A 16 GFAPGVLTQVYGPYASGKTTLALQTGL-LSGKKVAYVDTEGGFSPERLVQMAETRGL 71 (220)
T ss_dssp SBCTTSEEEEECSTTSSHHHHHHHHHH-HHCSEEEEEESSCCCCHHHHHHHHHTTTC
T ss_pred CCcCCEEEEEECCCCCCHHHHHHHHHH-HcCCcEEEEECCCCCCHHHHHHHHHhcCC
Confidence 7999999999999973 555555555 6666666665444 77777766655443
No 105
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=34.43 E-value=1.1e+02 Score=27.61 Aligned_cols=59 Identities=17% Similarity=0.139 Sum_probs=41.2
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 54 SSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 54 ~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
+.|.+.++++|++|.|.....+-..++.+|- ..|+.++.++... +++ ..+++.+++.++
T Consensus 167 ~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~--~~~-~~~~~lGa~~v~ 225 (348)
T 3two_A 167 SPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNE--HKK-QDALSMGVKHFY 225 (348)
T ss_dssp HHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSS--TTH-HHHHHTTCSEEE
T ss_pred HHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCH--HHH-HHHHhcCCCeec
Confidence 3455679999999999987666777777775 4688777765443 222 345667888877
No 106
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=34.35 E-value=1.6e+02 Score=26.48 Aligned_cols=55 Identities=13% Similarity=0.231 Sum_probs=34.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEec--CC--CCCHHHHHHHhhhcCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNI--NT--RLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l--~~--~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+++||.|.+..+....+.- ++...|+.++.+ ++ ....+.+...++..++++|++.
T Consensus 106 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 164 (367)
T 3euc_A 106 ARPGAKVMAPVPGFVMYAM---SAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAIVYLA 164 (367)
T ss_dssp CCTTCEEEEEESCSCCSCH---HHHTTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHH---HHHHcCCeEEEecCCCCCCCCHHHHHHHhhccCCCEEEEc
Confidence 4678888777665544332 234456655544 33 2467788888877677877774
No 107
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=34.12 E-value=1e+02 Score=27.77 Aligned_cols=59 Identities=12% Similarity=0.188 Sum_probs=36.6
Q ss_pred CCCCCCEEEEEcCCchh------HHHHHHhh-hccCceEEecCCCC------------CHHHHHHHhhhcCCcEEEEc
Q 036361 60 GIQRGHVVSVVAPNVPS------MYELQFGV-PMSGAILNNINTRL------------DAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~------~~~~~lA~-~~~G~~~v~l~~~~------------~~~~l~~~l~~~~~~~ii~~ 118 (485)
-+++||+|+|+.|.+.- -+-..... -..|..++.-+... ..+++..++..-.++.|++.
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~ 85 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTT 85 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEES
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEc
Confidence 47899999999998741 22222222 24677766443211 23456667777778888885
No 108
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=33.84 E-value=1.4e+02 Score=26.81 Aligned_cols=63 Identities=13% Similarity=0.148 Sum_probs=46.3
Q ss_pred HHcC-CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 57 SSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 57 ~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.+.| +++++.|.- ...+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 65 ~~~g~l~~~~~vv~-aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 65 EADGLLRPGATILE-PTSGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3444 567777655 45577778888888999988776666655556677889999999999863
No 109
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=33.00 E-value=1e+02 Score=28.13 Aligned_cols=15 Identities=13% Similarity=0.022 Sum_probs=7.9
Q ss_pred ccEEecc-HHHHHHHH
Q 036361 204 KGVVHSH-RGIFILTA 218 (485)
Q Consensus 204 K~v~~s~-~~~~~~~~ 218 (485)
-|..+.. +.+.....
T Consensus 195 ~g~~~~~~~~~~~~l~ 210 (393)
T 1mdo_A 195 GGIVVTDNPQFADKLR 210 (393)
T ss_dssp CEEEEESCHHHHHHHH
T ss_pred ceEEEeCCHHHHHHHH
Confidence 4455554 66655444
No 110
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=32.86 E-value=1.2e+02 Score=27.66 Aligned_cols=55 Identities=13% Similarity=0.134 Sum_probs=32.6
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-------CCHHHHHHHhhhcCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-------LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+++||.|.+..+....+. .++...|+.++.++.. ...+.+...++..++++|++.
T Consensus 106 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~ 167 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNMFY---SVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFC 167 (391)
T ss_dssp SCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEE
T ss_pred CCCCCeEEECCCCcHHHH---HHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEE
Confidence 357777766655544433 2344567666665542 567777777765566766553
No 111
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=32.79 E-value=1.7e+02 Score=24.09 Aligned_cols=83 Identities=6% Similarity=0.029 Sum_probs=44.3
Q ss_pred eeeeHHHHHHHHHHHHHHHHH-------cCCCCCCEEEEEcCCc----hhHHHHHHhhhccCceEEecCCCCCHHHHHHH
Q 036361 38 TTYTWSETHRRCLQVASSLSS-------VGIQRGHVVSVVAPNV----PSMYELQFGVPMSGAILNNINTRLDAHNLSVL 106 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~-------~gi~~gd~V~l~~~~~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 106 (485)
..++-.|....+..+...+.. ..-..+-+|.+.+..+ +-..+....+-..|.-++.+....+.+++...
T Consensus 55 g~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~ 134 (210)
T 1y80_A 55 NEMFVPEVLMSANAMNAGVEVVKQSQQAFDMPSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEA 134 (210)
T ss_dssp ------------------------------CCCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHH
T ss_pred CceeHHHHHHHHHHHHHHHHHHHHHhccccCCCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHH
Confidence 445556655544444433322 1112233566665442 44455555566889999999999999999999
Q ss_pred hhhcCCcEEEEcCc
Q 036361 107 LQHSESKLVFVDHL 120 (485)
Q Consensus 107 l~~~~~~~ii~~~~ 120 (485)
+++.++++|..+..
T Consensus 135 ~~~~~~d~v~lS~~ 148 (210)
T 1y80_A 135 VKKYQPDIVGMSAL 148 (210)
T ss_dssp HHHHCCSEEEEECC
T ss_pred HHHcCCCEEEEecc
Confidence 99999999998764
No 112
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=32.63 E-value=1.1e+02 Score=27.16 Aligned_cols=76 Identities=14% Similarity=0.191 Sum_probs=48.7
Q ss_pred eeeHHHHHHHHHH--HH-HHHHHcCCCCCCEEEEEc-CCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcE
Q 036361 39 TYTWSETHRRCLQ--VA-SSLSSVGIQRGHVVSVVA-PNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 39 ~~Ty~~l~~~~~~--lA-~~L~~~gi~~gd~V~l~~-~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (485)
.+++.+..-.... .| +.|...++++|++|.|.. .-..-..++++|- ..|+.++.+. +.++ ..++++.+++.
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 4666665433222 12 334457999999999997 5566777777765 5688766553 3444 45677788887
Q ss_pred EEEcC
Q 036361 115 VFVDH 119 (485)
Q Consensus 115 ii~~~ 119 (485)
++...
T Consensus 200 ~i~~~ 204 (321)
T 3tqh_A 200 CINYH 204 (321)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 76543
No 113
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=32.56 E-value=1.2e+02 Score=27.49 Aligned_cols=51 Identities=12% Similarity=0.135 Sum_probs=26.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC--------CCHHHHHHHhhhcCCcEEEE
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR--------LDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~ii~ 117 (485)
++||.|.+..+....+.. ++...|+.++.++.. ...+.+...++. ++++++
T Consensus 112 ~~gd~vl~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~v~i 170 (391)
T 4dq6_A 112 KANDKIMIQEPVYSPFNS---VVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD--VKLFIL 170 (391)
T ss_dssp CTTCEEEECSSCCTHHHH---HHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT--EEEEEE
T ss_pred CCCCEEEEcCCCCHHHHH---HHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc--CCEEEE
Confidence 566666655544443322 333456655555433 355666666665 555544
No 114
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=32.31 E-value=1e+02 Score=26.98 Aligned_cols=85 Identities=16% Similarity=0.245 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHH---HHHHhhhcCCcEEEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHN---LSVLLQHSESKLVFV 117 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~---l~~~l~~~~~~~ii~ 117 (485)
+++.++...+-..+++. .+ ++. ..+...+...++.-.|++-..|..-+.=...-++.+ +...+++.++++||+
T Consensus 152 ~~~~~~L~~Ld~~~~~~l~~~-~~~-~~v~~H~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~ 229 (284)
T 2prs_A 152 KDFEAQLASTETQVGNELAPL-KGK-GYFVFHDAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFA 229 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHGGG-TTC-CEEEEESCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCC-eEEEECccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34444444444444431 33 343 345567789999999999877654221123345554 455667889999999
Q ss_pred cCcchHHHHHHh
Q 036361 118 DHLHSSLVLEAL 129 (485)
Q Consensus 118 ~~~~~~~~~~~~ 129 (485)
+.....+..+.+
T Consensus 230 e~~~~~~~~~~i 241 (284)
T 2prs_A 230 EPQFRPAVVESV 241 (284)
T ss_dssp CTTSCSHHHHHH
T ss_pred eCCCChHHHHHH
Confidence 987766555444
No 115
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=32.26 E-value=88 Score=22.11 Aligned_cols=45 Identities=20% Similarity=0.318 Sum_probs=32.3
Q ss_pred CcchhHHHHHHHhhcC--------------CCcEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 036361 13 PLTTLGFLERAATAYS--------------DCPSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p--------------~~~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..|+.++++.....+| ...++..+++.+.+ +.-++.||.|+++-|
T Consensus 36 ~~Tv~~Ll~~L~~~~p~l~~~l~~~~g~~~~~v~v~VNg~~v~~---------------~~~L~dGDeV~i~pp 94 (98)
T 1vjk_A 36 GARVRDLIEEIKKRHEKFKEEVFGEGYDEDADVNIAVNGRYVSW---------------DEELKDGDVVGVFPP 94 (98)
T ss_dssp TCBHHHHHHHHHHHCGGGGGSCBCSSSCTTSSBEEEETTBCCCT---------------TCBCCTTCEEEEESC
T ss_pred CCCHHHHHHHHHhHChhHHHHhhccccccCCcEEEEECCEECCC---------------CCCCCCCCEEEEECC
Confidence 4689999988888765 44555556655541 456899999999865
No 116
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=31.95 E-value=1.4e+02 Score=26.65 Aligned_cols=77 Identities=13% Similarity=0.119 Sum_probs=49.6
Q ss_pred eeeHHHHHHHHHH---HHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEE
Q 036361 39 TYTWSETHRRCLQ---VASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLV 115 (485)
Q Consensus 39 ~~Ty~~l~~~~~~---lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 115 (485)
.+++.+..-.... .-+.|...++++|++|.|......-..++.+|- ..|+.++.++. +++.+ ..+++.+++.+
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~ 214 (340)
T 3s2e_A 139 KVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKL-NLARRLGAEVA 214 (340)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSEE
T ss_pred CCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHH-HHHHHcCCCEE
Confidence 4666664322111 123455568999999999987667777777776 45887776654 34443 35677888887
Q ss_pred EEcC
Q 036361 116 FVDH 119 (485)
Q Consensus 116 i~~~ 119 (485)
+...
T Consensus 215 i~~~ 218 (340)
T 3s2e_A 215 VNAR 218 (340)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7543
No 117
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=31.48 E-value=1.1e+02 Score=27.34 Aligned_cols=85 Identities=11% Similarity=0.109 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHH---HHhhhcCCcEEEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLS---VLLQHSESKLVFV 117 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~---~~l~~~~~~~ii~ 117 (485)
+++.++..++-..+++. .+ ++ +..+...+...++.-.|++-..|..-+.-....++.++. ..+++.++++||+
T Consensus 168 ~~~~~~L~~Ld~~~~~~l~~~-~~-~~~v~~H~af~Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~ 245 (312)
T 2o1e_A 168 KEYIAKLQDLDKLYRTTAKKA-EK-KEFITQHTAFGYLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYF 245 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC-SC-CEEEESSCTTHHHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEEC
T ss_pred HHHHHHHHHHHHHHHHHhhcc-CC-CEEEEECCchHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 34444444554444441 33 34 445667778899988888877664322112334555554 4556778999999
Q ss_pred cCcchHHHHHHh
Q 036361 118 DHLHSSLVLEAL 129 (485)
Q Consensus 118 ~~~~~~~~~~~~ 129 (485)
+.....+..+.+
T Consensus 246 e~~~~~~~~~~i 257 (312)
T 2o1e_A 246 EEIASSKVADTL 257 (312)
T ss_dssp SSCCCHHHHHHH
T ss_pred eCCCChHHHHHH
Confidence 987776644443
No 118
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=31.18 E-value=1.5e+02 Score=26.77 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=43.9
Q ss_pred HHHH--cCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 55 SLSS--VGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 55 ~L~~--~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
.|.+ .++++|++|.|..-...-..++.+|-...|+.++.++. +++.+ ..+++.+++.++-..+
T Consensus 176 al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi~~~~ 240 (359)
T 1h2b_A 176 AVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKL-KLAERLGADHVVDARR 240 (359)
T ss_dssp HHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHH-HHHHHTTCSEEEETTS
T ss_pred HHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHH-HHHHHhCCCEEEeccc
Confidence 4555 68999999999998667777777776543887666654 33443 3456788888876443
No 119
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=31.17 E-value=2.1e+02 Score=24.80 Aligned_cols=57 Identities=12% Similarity=0.079 Sum_probs=43.4
Q ss_pred HHHHHHHhhcCCCcEEEeCC------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHH
Q 036361 18 GFLERAATAYSDCPSIVYNN------TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMY 78 (485)
Q Consensus 18 ~~l~~~a~~~p~~~a~~~~~------~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~ 78 (485)
.++.+..+..|+...+.+.+ ...|..++.+++.+.++.|.+.|. ...++.-|+...+
T Consensus 19 tv~~~i~~~lP~~~~iy~~D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~----~~IVIACNTa~~~ 81 (269)
T 3ist_A 19 TVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGI----KMLVIACNTATAA 81 (269)
T ss_dssp HHHHHHHHHCTTCCEEEEECGGGCCCTTSCHHHHHHHHHHHHHHHHHTTC----SEEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCCccHH
Confidence 34566667789988887655 468999999999999999999766 3666666776654
No 120
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=31.15 E-value=1.4e+02 Score=26.95 Aligned_cols=79 Identities=19% Similarity=0.101 Sum_probs=49.3
Q ss_pred eeeHHHHHHHH--HHHH-HHHHH-cCCCCCCEEEEEcC-CchhHHHHHHhhhccCceE-EecCCCCCHHHHHHHhhhcCC
Q 036361 39 TYTWSETHRRC--LQVA-SSLSS-VGIQRGHVVSVVAP-NVPSMYELQFGVPMSGAIL-NNINTRLDAHNLSVLLQHSES 112 (485)
Q Consensus 39 ~~Ty~~l~~~~--~~lA-~~L~~-~gi~~gd~V~l~~~-~~~~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~ 112 (485)
.+++.+..... -..| +.|.+ .++++|++|.|... ...-.+++++|- ..|+.. +..+.....++....++..++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAA-ALGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHH-HHTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHH-HcCCEEEEEecCccchHHHHHHHHhcCC
Confidence 46776643321 1222 23444 58999999999997 556777777765 468754 444444444445566778888
Q ss_pred cEEEEc
Q 036361 113 KLVFVD 118 (485)
Q Consensus 113 ~~ii~~ 118 (485)
+.++..
T Consensus 218 ~~vi~~ 223 (357)
T 1zsy_A 218 EHVITE 223 (357)
T ss_dssp SEEEEH
T ss_pred cEEEec
Confidence 888753
No 121
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=30.29 E-value=36 Score=29.62 Aligned_cols=23 Identities=22% Similarity=0.466 Sum_probs=20.2
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcC
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..|.+.|.++||++||.|.|...
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsS 40 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSS 40 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCCCCEEEEEec
Confidence 56778899999999999999876
No 122
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=29.94 E-value=2.3e+02 Score=25.08 Aligned_cols=90 Identities=12% Similarity=0.041 Sum_probs=55.5
Q ss_pred CCCcEEEeCC--eeeeHHHHHHHHHHHHHHHHHcCC-CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHH
Q 036361 28 SDCPSIVYNN--TTYTWSETHRRCLQVASSLSSVGI-QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLS 104 (485)
Q Consensus 28 p~~~a~~~~~--~~~Ty~~l~~~~~~lA~~L~~~gi-~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~ 104 (485)
+.++.+..+. .+-|+++--- ...+.. +.+.|. ++|+.|.- ...+-.-..+.++|.+.|..++.+-|...+..-.
T Consensus 25 g~~i~~K~E~~~ptGSfK~R~a-~~~i~~-a~~~g~~~~~~~vv~-~ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~ 101 (316)
T 1y7l_A 25 NGNVVVKIEGRNPSYSVKCRIG-ANMVWQ-AEKDGTLTKGKEIVD-ATSGNTGIALAYVAAARGYKITLTMPETMSLERK 101 (316)
T ss_dssp TTCEEEEETTSSGGGBTHHHHH-HHHHHH-HHHTTSSCTTCEEEE-SCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHH
T ss_pred CCEEEEEeccCCCCCChHHHHH-HHHHHH-HHHcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHH
Confidence 3455664544 2334444322 233333 334454 66665544 4557777777888889998776665555555566
Q ss_pred HHhhhcCCcEEEEcCc
Q 036361 105 VLLQHSESKLVFVDHL 120 (485)
Q Consensus 105 ~~l~~~~~~~ii~~~~ 120 (485)
..++..++++++++..
T Consensus 102 ~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 102 RLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHHHHTTCEEEEECGG
T ss_pred HHHHHcCCEEEEeCCC
Confidence 7889999999999864
No 123
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=29.85 E-value=2.1e+02 Score=25.13 Aligned_cols=51 Identities=8% Similarity=-0.106 Sum_probs=37.5
Q ss_pred EcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCc
Q 036361 70 VAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHL 120 (485)
Q Consensus 70 ~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~ 120 (485)
....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 70 ~aSsGN~g~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 70 EPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLKMLGAELVLTPGE 120 (303)
T ss_dssp EECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred EECchHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 455566666777788899987766655544555667889999999999764
No 124
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=29.79 E-value=1.9e+02 Score=25.92 Aligned_cols=44 Identities=11% Similarity=0.103 Sum_probs=20.9
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCceEEecC--CC----CCHHHHHHHhh
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN--TR----LDAHNLSVLLQ 108 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~ 108 (485)
++||.|.+..+........ +...|+.++.++ .+ ...+.+...++
T Consensus 91 ~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 140 (371)
T 2e7j_A 91 KKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIE 140 (371)
T ss_dssp CTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHH
T ss_pred CCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHH
Confidence 4566665555544433322 344555544443 21 24555555554
No 125
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=29.61 E-value=94 Score=28.46 Aligned_cols=60 Identities=10% Similarity=0.017 Sum_probs=44.4
Q ss_pred CCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchH
Q 036361 64 GHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSS 123 (485)
Q Consensus 64 gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~ 123 (485)
|....+....+-.-..+.++|.+.|..++.+-|...+......++..++++++++....+
T Consensus 92 g~~~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~ 151 (364)
T 4h27_A 92 GCAHFVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELLDE 151 (364)
T ss_dssp TCCEEEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSSTTH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCHHH
Confidence 333445555577778888889999988777666666666778889999999999865443
No 126
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=29.61 E-value=1.3e+02 Score=27.16 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC------CCHHHHHHHhhhcCCcEEEEc
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR------LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~------~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+++||.|.+..+....+.- ++...|+.+++++.+ ...+.+...++. ++++|++.
T Consensus 102 ~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~-~~~~v~~~ 161 (375)
T 3op7_A 102 IEPGDHVISLYPTYQQLYD---IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRP-TTKMICIN 161 (375)
T ss_dssp CCTTCEEEEEESSCTHHHH---HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCT-TCCEEEEE
T ss_pred cCCCCEEEEeCCCchhHHH---HHHHcCCEEEEEeccccCCCCCCHHHHHHhhcc-CCeEEEEc
Confidence 5688888887776655443 234556655544322 366777777753 56666664
No 127
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=29.53 E-value=1e+02 Score=27.84 Aligned_cols=33 Identities=12% Similarity=0.082 Sum_probs=14.9
Q ss_pred ccCceEEecCCCCCHH-HHHHHhhhcCCcEEEEc
Q 036361 86 MSGAILNNINTRLDAH-NLSVLLQHSESKLVFVD 118 (485)
Q Consensus 86 ~~G~~~v~l~~~~~~~-~l~~~l~~~~~~~ii~~ 118 (485)
.-|-.++..++..+.- .....+...+.+++.++
T Consensus 86 ~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~ 119 (382)
T 4eb5_A 86 RKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIP 119 (382)
T ss_dssp GGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEEC
T ss_pred CCCCEEEECCCcchHHHHHHHHHHhCCcEEEEec
Confidence 3454444444444322 22223344566666664
No 128
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=29.31 E-value=1.9e+02 Score=25.89 Aligned_cols=78 Identities=12% Similarity=0.005 Sum_probs=50.4
Q ss_pred eeHHHHHHHHHH---HHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcE
Q 036361 40 YTWSETHRRCLQ---VASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 40 ~Ty~~l~~~~~~---lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (485)
+++.+....... .-+.|.+. ++++|++|.+......-..++++|-..-|+.++.++. +.+. ..++++.+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~-~~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDR-LALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHH-HHHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHH-HHHHHHcCCCE
Confidence 677665432221 12344443 7999999999988667777777776664667666644 3333 34567788888
Q ss_pred EEEcCc
Q 036361 115 VFVDHL 120 (485)
Q Consensus 115 ii~~~~ 120 (485)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 876543
No 129
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=28.49 E-value=2.3e+02 Score=26.30 Aligned_cols=60 Identities=17% Similarity=-0.031 Sum_probs=30.2
Q ss_pred EEcCCchhHHH-HHHhhhccCceEEecCCCCCHHH--HHHHhhhcCCcEEEEcCcchHHHHHH
Q 036361 69 VVAPNVPSMYE-LQFGVPMSGAILNNINTRLDAHN--LSVLLQHSESKLVFVDHLHSSLVLEA 128 (485)
Q Consensus 69 l~~~~~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~--l~~~l~~~~~~~ii~~~~~~~~~~~~ 128 (485)
++++++.+.+. ++.++.+.|-.++..++.+..-. +...+...+++.++++....+.+.+.
T Consensus 100 ~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~a 162 (414)
T 3ndn_A 100 FATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERA 162 (414)
T ss_dssp EEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHh
Confidence 44455544433 34455556655555555554321 22334556777777765544444443
No 130
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=28.18 E-value=41 Score=29.52 Aligned_cols=28 Identities=32% Similarity=0.442 Sum_probs=22.1
Q ss_pred eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 036361 38 TTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 38 ~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..+|-.+ |.+.|.++||++||.|.|...
T Consensus 20 ~~~T~~~-------L~~~L~~LGI~~Gd~llVHsS 47 (286)
T 3sma_A 20 ELVTRDR-------LASDLAALGVRPGGVLLVHAS 47 (286)
T ss_dssp CEECHHH-------HHHHHHHHTCCTTCEEEEEEC
T ss_pred CCcCHHH-------HHHHHHHcCCCCCCEEEEEec
Confidence 4566555 556788999999999999876
No 131
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=28.15 E-value=1.7e+02 Score=26.71 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 49 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 49 ~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+..+...+... +++||.|.+..+...... ..-++...|+.++.++.+ ...+.+...+++.++++|+...
T Consensus 72 t~al~~~~~~l-~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 72 RAGIEAVLASV-IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHHh-cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
No 132
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=28.06 E-value=41 Score=29.39 Aligned_cols=22 Identities=23% Similarity=0.526 Sum_probs=19.2
Q ss_pred HHHHHHHHcCCCCCCEEEEEcC
Q 036361 51 QVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 51 ~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
.|.+.|.++||++||.|.|...
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsS 38 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSS 38 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEEC
T ss_pred HHHHHHHHcCCCCCCEEEEEec
Confidence 4677789999999999999976
No 133
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=28.04 E-value=1.3e+02 Score=27.12 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=41.8
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc-eEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA-ILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
.+...++++|++|.|+..-.+-.+++++|- ..|+ .++.++.. ++. ..++++.+++.++..
T Consensus 158 al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~--~~~-~~~~~~lGa~~vi~~ 218 (352)
T 3fpc_A 158 GAELANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGSR--KHC-CDIALEYGATDIINY 218 (352)
T ss_dssp HHHHTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECCC--HHH-HHHHHHHTCCEEECG
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECCC--HHH-HHHHHHhCCceEEcC
Confidence 355579999999999987666777777765 5787 56666543 333 356677888877754
No 134
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=27.52 E-value=2.6e+02 Score=25.37 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=30.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhc---CCcEEEEcC
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHS---ESKLVFVDH 119 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~ii~~~ 119 (485)
+++||.|.+..+....+.- ++...|+.+++++. ...+.+...++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~~---~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASIID---GSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHHH---HHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHHH---HHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 3567776666655544332 23445666666643 3556666666654 456666543
No 135
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=27.35 E-value=2.9e+02 Score=25.49 Aligned_cols=58 Identities=5% Similarity=-0.088 Sum_probs=43.5
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHH
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSL 124 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~ 124 (485)
..+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++....+.
T Consensus 114 ~vv~aSsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~~~a 171 (398)
T 4d9i_A 114 TFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAECIVTDMNYDDT 171 (398)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTCEEEEEECTTCCHHHHHHHHTTTCEEEECSSCHHHH
T ss_pred EEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHcCCEEEEECCCHHHH
Confidence 3444666777778888899999887776666666666778899999999998754433
No 136
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=27.25 E-value=1.4e+02 Score=27.06 Aligned_cols=62 Identities=13% Similarity=0.134 Sum_probs=42.4
Q ss_pred HHHHcCCC-CCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 55 SLSSVGIQ-RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 55 ~L~~~gi~-~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.|.+.+++ +|++|.|.....+-..++.+|-. .|+.++.++.. ++.+..+.++.+++.++...
T Consensus 171 ~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~~~~lGa~~vi~~~ 233 (357)
T 2cf5_A 171 PLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEALQDLGADDYVIGS 233 (357)
T ss_dssp HHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHHHTTSCCSCEEETT
T ss_pred HHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHHHHHcCCceeeccc
Confidence 35557888 99999999876677777777754 68876666543 34444444477888776544
No 137
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=26.81 E-value=2.2e+02 Score=26.24 Aligned_cols=12 Identities=17% Similarity=0.094 Sum_probs=5.4
Q ss_pred CCCCEEEEEcCC
Q 036361 62 QRGHVVSVVAPN 73 (485)
Q Consensus 62 ~~gd~V~l~~~~ 73 (485)
++||.|.+..+.
T Consensus 93 ~~gd~vi~~~~~ 104 (412)
T 2cb1_A 93 RPGDEVVAAKGL 104 (412)
T ss_dssp CTTCEEEEETTC
T ss_pred CCCCEEEEeCCC
Confidence 444544444443
No 138
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=26.03 E-value=1.5e+02 Score=25.91 Aligned_cols=84 Identities=13% Similarity=0.194 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC--CCCHHH---HHHHhhhcCCcE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--RLDAHN---LSVLLQHSESKL 114 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~ 114 (485)
++++.++..++-..+++. .+ ++.. .+...+...++.-.|++-..|.. -+++ .-++.+ +...+++.++++
T Consensus 156 ~~~~~~~L~~Ld~~~~~~l~~~-~~~~-~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~ 231 (286)
T 3gi1_A 156 AKAFKKEAEQLTEEYTQKFKKV-RSKT-FVTQHTAFSYLAKRFGLKQLGIS--GISPEQEPSPRQLKEIQDFVKEYNVKT 231 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC-SCCE-EEEEESCCHHHHHHTTCEEEEEE--CSCC---CCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CCCE-EEEECCchHHHHHHCCCeEeecc--ccCCCCCCCHHHHHHHHHHHHHcCCCE
Confidence 344555555555555552 33 4444 45667789999999998877633 2333 234544 455667889999
Q ss_pred EEEcCcchHHHHHHh
Q 036361 115 VFVDHLHSSLVLEAL 129 (485)
Q Consensus 115 ii~~~~~~~~~~~~~ 129 (485)
||++........+.+
T Consensus 232 if~e~~~~~~~~~~l 246 (286)
T 3gi1_A 232 IFAEDNVNPKIAHAI 246 (286)
T ss_dssp EEECTTSCTHHHHHH
T ss_pred EEEeCCCChHHHHHH
Confidence 999987776655444
No 139
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=25.78 E-value=1.1e+02 Score=27.51 Aligned_cols=12 Identities=17% Similarity=0.349 Sum_probs=6.0
Q ss_pred hhhcCCcEEEEc
Q 036361 107 LQHSESKLVFVD 118 (485)
Q Consensus 107 l~~~~~~~ii~~ 118 (485)
+...+++.+.++
T Consensus 108 ~~~~g~~~~~v~ 119 (382)
T 4hvk_A 108 LQKQGFEVEYIP 119 (382)
T ss_dssp HHHTTCEEEEEC
T ss_pred HHhcCCEEEEec
Confidence 334455555554
No 140
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=25.41 E-value=1.7e+02 Score=26.59 Aligned_cols=59 Identities=17% Similarity=0.253 Sum_probs=40.7
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc-eEEecCCCCCHHHHHHHhhhcCCcEEEE
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA-ILNNINTRLDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~ 117 (485)
.|...++++|++|.|......-.+++.+|- ..|+ .++.++.. ++. ..++++.+++.++.
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTRQ--ATK-RRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--HHH-HHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHH-HHHHHHcCCCEEEC
Confidence 355578999999999987556777666665 5788 66666543 333 34566778887764
No 141
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=25.17 E-value=1.6e+02 Score=26.62 Aligned_cols=76 Identities=8% Similarity=0.052 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCCEEEEEcCCchhHHHHHHhhh--ccCceEEecCCCCCHHH--HHHHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSS-VGIQRGHVVSVVAPNVPSMYELQFGVP--MSGAILNNINTRLDAHN--LSVLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~-~gi~~gd~V~l~~~~~~~~~~~~lA~~--~~G~~~v~l~~~~~~~~--l~~~l~~~~~~~ii 116 (485)
|.+.......+...|.+ .|+.+. .| ++.+++.+.+.+.+.++ .-|-.++..+|...... +..+.+..+++.+.
T Consensus 54 y~~~~~~~~~l~~~la~~~g~~~~-~v-~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 131 (390)
T 1elu_A 54 NQHIQQLIAQLRQALAETFNVDPN-TI-TITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRF 131 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCGG-GE-EEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHH-HE-EEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEE
Confidence 43333334444444444 355443 23 33445555544444433 45555555556555433 22334555666666
Q ss_pred EcC
Q 036361 117 VDH 119 (485)
Q Consensus 117 ~~~ 119 (485)
+..
T Consensus 132 v~~ 134 (390)
T 1elu_A 132 FPV 134 (390)
T ss_dssp ECC
T ss_pred EcC
Confidence 653
No 142
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=25.06 E-value=2.2e+02 Score=25.79 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=42.5
Q ss_pred HHHHcCCC-CCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcC
Q 036361 55 SLSSVGIQ-RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 55 ~L~~~gi~-~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.|.+.+++ +|++|.|.....+-..++.+|- ..|+.++.++. +++.+....+..+++.++...
T Consensus 178 al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 178 PLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp HHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEETT
T ss_pred HHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEecc
Confidence 45567888 9999999987666777777765 46887665543 345555555577888776543
No 143
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=24.96 E-value=2.1e+02 Score=25.68 Aligned_cols=68 Identities=16% Similarity=0.144 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 49 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 49 ~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
...+. .+... +++||.|.+.-+...- ....-.+...|+.++.++.+ ...+.+...++..++++|++..
T Consensus 64 t~al~-~~~~~-~~~gd~vi~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 135 (384)
T 3zrp_A 64 TSAME-SVTSL-LKPNDKILVVSNGVFG-DRWEQIFKRYPVNVKVLRPSPGDYVKPGEVEEEVRKSEYKLVALTH 135 (384)
T ss_dssp HHHHH-HGGGG-CCTTCEEEEECSSHHH-HHHHHHHTTSSCEEEEECCSTTCCCCHHHHHHHHHHSCEEEEEEES
T ss_pred HHHHH-HHHhh-cCCCCEEEEecCCcch-HHHHHHHHHcCCcEEEecCCCCCCCCHHHHHHHHHhCCCcEEEEeC
No 144
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=24.92 E-value=1.8e+02 Score=27.34 Aligned_cols=59 Identities=10% Similarity=0.214 Sum_probs=34.5
Q ss_pred CCCCCEEEEEc-CCchhHHHHH--------HhhhccCceEEecCCC----CCHHHHHHHhhh-cCCcEEEEcC
Q 036361 61 IQRGHVVSVVA-PNVPSMYELQ--------FGVPMSGAILNNINTR----LDAHNLSVLLQH-SESKLVFVDH 119 (485)
Q Consensus 61 i~~gd~V~l~~-~~~~~~~~~~--------lA~~~~G~~~v~l~~~----~~~~~l~~~l~~-~~~~~ii~~~ 119 (485)
+++||.|.+.. +......-.+ -.+...|+.+..++.+ ...+.+...+++ .++++|++..
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 56888776664 3322222122 1234557777766653 466777777764 4677887766
No 145
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=24.79 E-value=1.4e+02 Score=27.62 Aligned_cols=17 Identities=18% Similarity=0.413 Sum_probs=9.4
Q ss_pred cccEEec-cHHHHHHHHH
Q 036361 203 PKGVVHS-HRGIFILTAN 219 (485)
Q Consensus 203 pK~v~~s-~~~~~~~~~~ 219 (485)
.-|.++. .+.+......
T Consensus 198 ~~g~~~~~~~~l~~~~~~ 215 (418)
T 2c81_A 198 EGGIIVTKNPRLFELIQQ 215 (418)
T ss_dssp SCEEEEESCHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHH
Confidence 4456666 4666554443
No 146
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=24.73 E-value=3.2e+02 Score=25.68 Aligned_cols=60 Identities=8% Similarity=-0.136 Sum_probs=44.9
Q ss_pred EEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcchHHH
Q 036361 66 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHSSLV 125 (485)
Q Consensus 66 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~ 125 (485)
+..+....+-.-..+.++|.+.|..++.+=|...+..-...++..++++++++....+..
T Consensus 161 ~~vv~aSsGNhg~avA~~aa~~G~~~~Ivmp~~~~~~k~~~~r~~GA~Vv~v~~~~~~a~ 220 (442)
T 3ss7_X 161 YSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAV 220 (442)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEESSCHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHHH
Confidence 356667777777888888999998877665655555667788999999999987654443
No 147
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=24.69 E-value=1.8e+02 Score=26.53 Aligned_cols=61 Identities=16% Similarity=0.081 Sum_probs=40.7
Q ss_pred HHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 54 SSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 54 ~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+.|.+.++++|++|.|.....+-..++.+|-. .|+.++.++.. ++.+. .+++.+++.++..
T Consensus 185 ~al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~Vi~~~~~--~~~~~-~a~~lGa~~vi~~ 245 (369)
T 1uuf_A 185 SPLRHWQAGPGKKVGVVGIGGLGHMGIKLAHA-MGAHVVAFTTS--EAKRE-AAKALGADEVVNS 245 (369)
T ss_dssp HHHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESS--GGGHH-HHHHHTCSEEEET
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCC--HHHHH-HHHHcCCcEEecc
Confidence 34555689999999999876667777777754 58876555533 33333 3445778777654
No 148
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=24.65 E-value=2e+02 Score=26.92 Aligned_cols=59 Identities=8% Similarity=0.146 Sum_probs=34.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHH---------hhhccCceEEecCCC---CCHHHHHHHhhh-cCCcEEEEcC
Q 036361 61 IQRGHVVSVVAPNVPSMYELQF---------GVPMSGAILNNINTR---LDAHNLSVLLQH-SESKLVFVDH 119 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~l---------A~~~~G~~~v~l~~~---~~~~~l~~~l~~-~~~~~ii~~~ 119 (485)
++|||.|.+...........++ .+...|+.+..++.. ...+.+...+++ .++++|+++.
T Consensus 113 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~~~d~e~l~~~i~~~~~tklV~i~~ 184 (427)
T 3hvy_A 113 LRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDLKDGKVDINTVKEELKKDDSIKLIHIQR 184 (427)
T ss_dssp CCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCCBTTBCCHHHHHHHHHHCTTEEEEEEES
T ss_pred cCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecCCCCCcCHHHHHHHhhCCCCCEEEEEEC
Confidence 6788887766512222222222 233467777766542 456777777764 5678888776
No 149
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=24.45 E-value=2.3e+02 Score=25.68 Aligned_cols=34 Identities=6% Similarity=-0.054 Sum_probs=14.8
Q ss_pred hccCceEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 85 PMSGAILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
+.-|-.++..+|..........++..+.+.+.+.
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~ 123 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAERAVEMSERYGADVRTIE 123 (396)
T ss_dssp CCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCeEEEEcCCcccHHHHHHHHHcCCceEEec
Confidence 3344444444444443322234444555555544
No 150
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=24.16 E-value=1.2e+02 Score=20.07 Aligned_cols=46 Identities=22% Similarity=0.216 Sum_probs=32.7
Q ss_pred CCcchhHHHHHHHhhcCC--Cc--EEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 036361 12 TPLTTLGFLERAATAYSD--CP--SIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 12 ~~~tl~~~l~~~a~~~p~--~~--a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
...|+.++++.....+|+ .+ ++..+++.+.. +.-++.||+|+++-|
T Consensus 24 ~~~tv~~ll~~l~~~~p~~~~v~~~v~vNg~~v~~---------------~~~L~~gD~V~i~pp 73 (77)
T 2q5w_D 24 QALTVQQFEDLLFERYPQINNKKFQVAVNEEFVQK---------------SDFIQPNDTVALIPP 73 (77)
T ss_dssp SCEEHHHHHHHHHHHCGGGTTCCCEEEETTEEECT---------------TSEECTTCEEEEECS
T ss_pred CCCCHHHHHHHHHHHCcchhcceEEEEECCEECCC---------------CCCcCCCCEEEEECC
Confidence 456899999888877763 44 56666665552 246889999999865
No 151
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=24.10 E-value=1.3e+02 Score=26.88 Aligned_cols=56 Identities=7% Similarity=0.006 Sum_probs=40.8
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcch
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
..+....+-.-..+.++|.+.|..++.+-|...+......++..++++++++....
T Consensus 56 ~vv~~ssGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~~~ 111 (318)
T 2rkb_A 56 HLVCSSGGNAGIAAAYAARKLGIPATIVLPESTSLQVVQRLQGEGAEVQLTGKVWD 111 (318)
T ss_dssp EEEECCCSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSSHH
T ss_pred EEEEECCchHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHhcCCEEEEECCCHH
Confidence 33444557777777888889998877766655555667788899999999886543
No 152
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=23.99 E-value=3.8e+02 Score=23.70 Aligned_cols=71 Identities=10% Similarity=-0.054 Sum_probs=47.7
Q ss_pred HHHHHHHHHHc-CCCCCCEEEEEcCCchhHHHHHHhhhcc----C---ceEEecCCCCC---H---HHHHHHhhhcCCcE
Q 036361 49 CLQVASSLSSV-GIQRGHVVSVVAPNVPSMYELQFGVPMS----G---AILNNINTRLD---A---HNLSVLLQHSESKL 114 (485)
Q Consensus 49 ~~~lA~~L~~~-gi~~gd~V~l~~~~~~~~~~~~lA~~~~----G---~~~v~l~~~~~---~---~~l~~~l~~~~~~~ 114 (485)
..++.+.+.+. -+.++++|+|.+.-+.|..+++..+.+. | ...+.+|.... . +....+.+..+..+
T Consensus 8 ~~~~~~~i~~~~l~~~~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~ 87 (317)
T 1wy5_A 8 IRKVLALQNDEKIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKI 87 (317)
T ss_dssp HHHHHHHHHHHCSCSSCCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcE
Confidence 44566667764 3688999999999999999988777654 3 44566665553 1 22445556667776
Q ss_pred EEEcC
Q 036361 115 VFVDH 119 (485)
Q Consensus 115 ii~~~ 119 (485)
.+.+-
T Consensus 88 ~v~~~ 92 (317)
T 1wy5_A 88 FVGKE 92 (317)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 66653
No 153
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=23.73 E-value=3.5e+02 Score=23.45 Aligned_cols=77 Identities=12% Similarity=0.008 Sum_probs=45.4
Q ss_pred eeeHHH-HHHHHHHHHHHHHHcC-CCCCCEEEEEcCCchhHHHHHHhhhccC-------------ceEEecCC--CCCHH
Q 036361 39 TYTWSE-THRRCLQVASSLSSVG-IQRGHVVSVVAPNVPSMYELQFGVPMSG-------------AILNNINT--RLDAH 101 (485)
Q Consensus 39 ~~Ty~~-l~~~~~~lA~~L~~~g-i~~gd~V~l~~~~~~~~~~~~lA~~~~G-------------~~~v~l~~--~~~~~ 101 (485)
.+++.+ +.+.+..+...+.+.| . ..|.|-+.-++|+.++..-|.+++ .+.+.++. ..+.+
T Consensus 16 ~~~~~~~i~~~~~~L~~~l~~~g~~---~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~~~~~ 92 (275)
T 1wxi_A 16 QINAEEEIRRSVDFLKSYLQTYPFI---KSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQADEQ 92 (275)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHSTTC---CEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCTTHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHcCCC---CCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCccCHH
Confidence 466654 4555666666776666 4 368888999999977765444442 23334432 22344
Q ss_pred HHHHHhhhcCC-cEEEEc
Q 036361 102 NLSVLLQHSES-KLVFVD 118 (485)
Q Consensus 102 ~l~~~l~~~~~-~~ii~~ 118 (485)
....+.+..++ ...+++
T Consensus 93 dA~~va~~lgi~~~~~i~ 110 (275)
T 1wxi_A 93 DCQDAIAFIQPDRVLTVN 110 (275)
T ss_dssp HHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHcCCCeEEEEe
Confidence 45556666666 555554
No 154
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=23.62 E-value=2e+02 Score=26.04 Aligned_cols=13 Identities=0% Similarity=-0.043 Sum_probs=8.0
Q ss_pred cEEeccHHHHHHH
Q 036361 205 GVVHSHRGIFILT 217 (485)
Q Consensus 205 ~v~~s~~~~~~~~ 217 (485)
|+++....+....
T Consensus 205 G~l~~~~~~~~~l 217 (392)
T 2z9v_A 205 TMMGVSERAWAKM 217 (392)
T ss_dssp EEEEECHHHHHHH
T ss_pred eEEEECHHHHHHh
Confidence 6777777665433
No 155
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=23.61 E-value=1.4e+02 Score=25.47 Aligned_cols=74 Identities=1% Similarity=-0.072 Sum_probs=45.7
Q ss_pred eeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccC----ceEEecCCCCC--HHHHHHHhhhcCCc
Q 036361 40 YTWSETHRRCLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSG----AILNNINTRLD--AHNLSVLLQHSESK 113 (485)
Q Consensus 40 ~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G----~~~v~l~~~~~--~~~l~~~l~~~~~~ 113 (485)
+.+.++ .+++..+|++. .++.|++.+.-+.|..++..-|.+++ ...+.++...+ .+....+.+..+++
T Consensus 4 ~~~~~~---~~~l~~~i~~~---~~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~~~~~~a~~~a~~lgi~ 77 (257)
T 2e18_A 4 LDYDKV---IERILEFIREK---GNNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFENKDVEDAKLVAEKLGIG 77 (257)
T ss_dssp ECHHHH---HHHHHHHHHHH---CTTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCSTHHHHHHHHHHHHTCE
T ss_pred CCHHHH---HHHHHHHHHHh---CCCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCchHHHHHHHHHHHhCCC
Confidence 344444 44556667766 45679999999999988777666654 23444444332 22345556667777
Q ss_pred EEEEcC
Q 036361 114 LVFVDH 119 (485)
Q Consensus 114 ~ii~~~ 119 (485)
+.+++-
T Consensus 78 ~~~i~i 83 (257)
T 2e18_A 78 YKVINI 83 (257)
T ss_dssp EEECCC
T ss_pred EEEEEC
Confidence 766653
No 156
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=23.59 E-value=3.2e+02 Score=24.45 Aligned_cols=56 Identities=16% Similarity=0.048 Sum_probs=26.3
Q ss_pred CCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC-C----CCHHHHHHHhhhcCCcEEEEc
Q 036361 62 QRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT-R----LDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 62 ~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~-~----~~~~~l~~~l~~~~~~~ii~~ 118 (485)
++||.|.+.-+....... .-++...|+.++.++. + ...+.+...++..++++|++.
T Consensus 84 ~~gd~vlv~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 144 (385)
T 2bkw_A 84 APNKNVLVVSTGTFSDRF-ADCLRSYGAQVDVVRPLKIGESVPLELITEKLSQNSYGAVTVT 144 (385)
T ss_dssp CSCCEEEEECSSHHHHHH-HHHHHHTTCEEEEECCSSTTSCCCHHHHHHHHHHSCCSEEEEE
T ss_pred CCCCeEEEEcCCcchHHH-HHHHHHcCCceEEEecCCCCCCCCHHHHHHHHhcCCCCEEEEE
Confidence 567766555333322211 1223345655544433 1 345666666654445555554
No 157
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=23.04 E-value=1e+02 Score=27.99 Aligned_cols=58 Identities=17% Similarity=0.180 Sum_probs=28.6
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-----CCHHHHHHHhhhcCCcEEEE
Q 036361 56 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-----LDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 56 L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~ii~ 117 (485)
|...++++||.|.+..+....... ++...|+.++.++.+ ...+.+...++. ++++|+.
T Consensus 68 l~~l~~~~gd~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 130 (373)
T 3frk_A 68 LKGYDIGFGDEVIVPSNTFIATAL---AVSYTGAKPIFVEPDIRTYNIDPSLIESAITE-KTKAIIA 130 (373)
T ss_dssp HHHTTCCTTCEEEEETTSCTHHHH---HHHHHSCEEEEECEETTTTEECGGGTGGGCCT-TEEEEEE
T ss_pred HHHcCCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEeccccccCcCHHHHHHhcCC-CCeEEEE
Confidence 333456677776666555544332 234456555444322 144555554443 4455554
No 158
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=22.90 E-value=2.1e+02 Score=25.82 Aligned_cols=60 Identities=22% Similarity=0.174 Sum_probs=40.3
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc-eEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA-ILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
.|...++++|++|.|......-..++.+|- ..|+ .++.++. +.+.+ .++++.+++.++..
T Consensus 163 al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~vi~~ 223 (356)
T 1pl8_A 163 ACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATRL-SKAKEIGADLVLQI 223 (356)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHHH-HHHHHTTCSEEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHHH-HHHHHhCCCEEEcC
Confidence 344468999999999987666777777775 4687 5665543 23333 44567788777653
No 159
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=22.83 E-value=94 Score=27.25 Aligned_cols=83 Identities=16% Similarity=0.203 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC--CCCHHH---HHHHhhhcCCcEE
Q 036361 43 SETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--RLDAHN---LSVLLQHSESKLV 115 (485)
Q Consensus 43 ~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~~~~~~---l~~~l~~~~~~~i 115 (485)
+++.++...+-..+++. .+ ++.. .+...+...++.-.|++-..|.. -+.+ ..++.+ +...+++.++++|
T Consensus 155 ~~~~~~L~~Ld~~~~~~l~~~-~~~~-~v~~H~af~Yf~~~yGl~~~~~~--~~~~~~eps~~~l~~l~~~ik~~~v~~i 230 (284)
T 3cx3_A 155 QAFIKKAQELTKKFQPKFEKA-TQKT-FVTQHTAFSYLAKRFGLNQLGIA--GISPEQEPSPRQLTEIQEFVKTYKVKTI 230 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHSC-SCCC-EEEEESCCHHHHHHTTCCEEEEE--CSSTTCCCCSHHHHHHHHHHHHTTCCCE
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CCCE-EEEECCchHHHHHHcCCEEeecc--CCCCCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 33444444444444431 33 3444 45566688999999998877643 2332 234444 4556777899999
Q ss_pred EEcCcchHHHHHHh
Q 036361 116 FVDHLHSSLVLEAL 129 (485)
Q Consensus 116 i~~~~~~~~~~~~~ 129 (485)
|++........+.+
T Consensus 231 f~e~~~~~~~~~~i 244 (284)
T 3cx3_A 231 FTESNASSKVAETL 244 (284)
T ss_dssp EECSSSCCHHHHHH
T ss_pred EEeCCCCcHHHHHH
Confidence 99987776554444
No 160
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=22.75 E-value=2.3e+02 Score=26.10 Aligned_cols=11 Identities=9% Similarity=0.413 Sum_probs=7.3
Q ss_pred cEEeccHHHHH
Q 036361 205 GVVHSHRGIFI 215 (485)
Q Consensus 205 ~v~~s~~~~~~ 215 (485)
|+++..+.++.
T Consensus 220 G~~~~~~~~~~ 230 (404)
T 1e5e_A 220 GLICGKADLLQ 230 (404)
T ss_dssp EEEEECHHHHH
T ss_pred EEEEECHHHHH
Confidence 77777776544
No 161
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=22.70 E-value=2.6e+02 Score=25.43 Aligned_cols=69 Identities=14% Similarity=0.080 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 49 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 49 ~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
...+...+... +++||.|.+..+...-.. ..-++...|+.++.++.+ ...+.+...++..++++|++..
T Consensus 74 t~al~~~~~~~-~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 146 (411)
T 3nnk_A 74 RAGIEAILVSA-IRPGDKVLVPVFGRFGHL-LCEIARRCRAEVHTIEVPWGEVFTPDQVEDAVKRIRPRLLLTVQ 146 (411)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEECSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHHh-cCCCCEEEEecCCchHHH-HHHHHHHcCCeEEEEecCCCCCCCHHHHHHHHhhCCCeEEEEeC
No 162
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=22.67 E-value=2.6e+02 Score=25.01 Aligned_cols=53 Identities=19% Similarity=0.232 Sum_probs=25.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC-------CCHHHHHHHhhhcCCcEEEE
Q 036361 61 IQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR-------LDAHNLSVLLQHSESKLVFV 117 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~ii~ 117 (485)
+++||.|.+..+....+. -++...|+.++.++.. ...+.+...+ ..++++|++
T Consensus 103 ~~~gd~vl~~~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l-~~~~~~v~i 162 (383)
T 3kax_A 103 TKENESVLVQPPIYPPFF---EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQF-QQGVKLMLL 162 (383)
T ss_dssp CCTTCEEEECSSCCHHHH---HHHHHTTCEEEECCCEEETTEEECCHHHHHHHH-TTTCCEEEE
T ss_pred CCCCCEEEEcCCCcHHHH---HHHHHcCCEEEeccceecCCcEEEcHHHHHHHh-CcCCeEEEE
Confidence 346666665555444332 2233455555544432 3555666655 334555544
No 163
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=22.59 E-value=1.9e+02 Score=26.15 Aligned_cols=45 Identities=22% Similarity=0.256 Sum_probs=20.7
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCC--C---CCHHHHHHHh
Q 036361 60 GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--R---LDAHNLSVLL 107 (485)
Q Consensus 60 gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~---~~~~~l~~~l 107 (485)
++++||.|.+..+......- ++...|+.++.++. . ...+.+...+
T Consensus 74 ~~~~gd~Vi~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~~d~~~l~~~i 123 (388)
T 1b9h_A 74 GVGPGTEVIVPAFTFISSSQ---AAQRLGAVTVPVDVDAATYNLDPEAVAAAV 123 (388)
T ss_dssp TCCTTCEEEEESSSCTHHHH---HHHHTTCEEEEECBCTTTCCBCHHHHHHHC
T ss_pred CCCCcCEEEECCCccHHHHH---HHHHcCCEEEEEecCCCcCCCCHHHHHHhc
Confidence 45566666655554443322 23444554443332 1 2445555544
No 164
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=22.49 E-value=2.3e+02 Score=25.41 Aligned_cols=22 Identities=23% Similarity=0.046 Sum_probs=13.8
Q ss_pred CCCcccEEeccHHHHHHHHHHH
Q 036361 200 TSSPKGVVHSHRGIFILTANAL 221 (485)
Q Consensus 200 TG~pK~v~~s~~~~~~~~~~~~ 221 (485)
+|.+-|.++..+.+........
T Consensus 227 ~G~r~G~~~~~~~~~~~~~~~~ 248 (370)
T 2z61_A 227 TGWRIGYVISNDEIIEAILKLQ 248 (370)
T ss_dssp GGGCCEEEECCHHHHHHHHHHH
T ss_pred ccceEEEEEECHHHHHHHHHHH
Confidence 4445678888887766554443
No 165
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=22.38 E-value=1.9e+02 Score=19.70 Aligned_cols=45 Identities=13% Similarity=0.120 Sum_probs=32.1
Q ss_pred CcchhHHHHHHHhhcCCC--------------cEEEeCCeeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcC
Q 036361 13 PLTTLGFLERAATAYSDC--------------PSIVYNNTTYTWSETHRRCLQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 13 ~~tl~~~l~~~a~~~p~~--------------~a~~~~~~~~Ty~~l~~~~~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..|+.++++....++|.- ..+..+++.+.. +.-++.||.|+++-|
T Consensus 27 ~~Tv~~ll~~L~~~~p~~~~~~l~~~g~l~~~~~v~VN~~~v~~---------------~~~l~~gDeV~i~Pp 85 (89)
T 3po0_A 27 DATVGDALDALVGAHPALESRVFGDDGELYDHINVLRNGEAAAL---------------GEATAAGDELALFPP 85 (89)
T ss_dssp TCBHHHHHHHHHHHCGGGHHHHBCTTSCBCTTSEEEETTEECCT---------------TSBCCTTCEEEEECC
T ss_pred CCcHHHHHHHHHHHCcHHHHHHhccCCcccccEEEEECCEECCC---------------CcccCCCCEEEEECC
Confidence 468999999888888742 445555555542 456899999999865
No 166
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=22.29 E-value=1.4e+02 Score=27.83 Aligned_cols=51 Identities=20% Similarity=0.143 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHH--cCCCCCCEEEEEcCCc-hhHH-HHHHhhhccCceEEecC
Q 036361 45 THRRCLQVASSLSS--VGIQRGHVVSVVAPNV-PSMY-ELQFGVPMSGAILNNIN 95 (485)
Q Consensus 45 l~~~~~~lA~~L~~--~gi~~gd~V~l~~~~~-~~~~-~~~lA~~~~G~~~v~l~ 95 (485)
+..+..++|..+.+ .++++|+.|.|..+.. .+++ .+.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 45677888888887 5889999999998865 3333 33446677888877654
No 167
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=22.26 E-value=1.5e+02 Score=19.23 Aligned_cols=32 Identities=6% Similarity=0.007 Sum_probs=16.6
Q ss_pred HHHHHHHhhcCCCcEEEeCCeeeeHHHHHHHH
Q 036361 18 GFLERAATAYSDCPSIVYNNTTYTWSETHRRC 49 (485)
Q Consensus 18 ~~l~~~a~~~p~~~a~~~~~~~~Ty~~l~~~~ 49 (485)
..|....+.+|+...++-.++..+|..+.+-.
T Consensus 34 ~~l~~~~~~~~~~~V~I~aD~~~~y~~vv~vm 65 (74)
T 2jwk_A 34 QLSRQEFDKDNNTLFLVGGAKEVPYEEVIKAL 65 (74)
T ss_dssp HHHHHHHHHCTTCCEEEEECTTSCHHHHHHHH
T ss_pred HHHHHHHhhCCCceEEEEcCCCCCHHHHHHHH
Confidence 33444444555555555555555655554433
No 168
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=22.11 E-value=2.1e+02 Score=26.62 Aligned_cols=58 Identities=5% Similarity=0.022 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHH--------hhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 61 IQRGHVVSVVAPNVPSMYELQF--------GVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 61 i~~gd~V~l~~~~~~~~~~~~l--------A~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
+++||.|.+...........++ .+...|+.+..++.+ ...+.+...++. +.++|+++.
T Consensus 98 l~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~~g~~d~e~l~~ai~~-~tklV~i~~ 167 (409)
T 3jzl_A 98 LRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTP-KTKMIGIQR 167 (409)
T ss_dssp CCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCTTSCCCHHHHHHHCCT-TEEEEEEEC
T ss_pred cCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCCCCCcCHHHHHHhccC-CCeEEEEEC
Confidence 4677777665512222222222 234557666666542 456666666653 566776654
No 169
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=21.99 E-value=2.6e+02 Score=24.88 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=39.7
Q ss_pred HHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEE
Q 036361 55 SLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 55 ~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii 116 (485)
.|.+.++++|++|.|.....+-..++.+|- ..|+.++.++. +++.+. .+++.+++.++
T Consensus 156 ~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~~ 213 (339)
T 1rjw_A 156 ALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADLVV 213 (339)
T ss_dssp HHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSEEE
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCEEe
Confidence 344568999999999988667777777765 46887766654 344443 34567777665
No 170
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=21.79 E-value=1.4e+02 Score=26.94 Aligned_cols=56 Identities=9% Similarity=-0.110 Sum_probs=40.1
Q ss_pred EEEEEcCCchhHHHHHHhhhccCceEEecCCCC-CHHHHHHHhhhcCCcEEEEcCcc
Q 036361 66 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRL-DAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 66 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
...+....+-.-..+.++|.+.|..++.+-|.. .+..-...++..++++++++...
T Consensus 78 ~~vv~~SsGN~g~alA~~a~~~G~~~~iv~p~~~~~~~k~~~~~~~GA~V~~v~~~~ 134 (351)
T 3aey_A 78 QAVACASTGNTAASAAAYAARAGILAIVVLPAGYVALGKVAQSLVHGARIVQVEGNF 134 (351)
T ss_dssp SEEEESCSSHHHHHHHHHHHHHTSEEEEEEETTCSCHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEeCCCHHHHHHHHHHHHcCCCEEEEECCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 344555666666767788899999877665553 44455678889999999998753
No 171
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=21.73 E-value=1.6e+02 Score=25.82 Aligned_cols=84 Identities=11% Similarity=0.062 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHHHc--CCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHH---HHhhhcCCcEEE
Q 036361 42 WSETHRRCLQVASSLSSV--GIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLS---VLLQHSESKLVF 116 (485)
Q Consensus 42 y~~l~~~~~~lA~~L~~~--gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~---~~l~~~~~~~ii 116 (485)
++++.++...+-..+++. .+ ++ +..+...+...++.-.|++-..|..- ....-++.++. ..+++.++++||
T Consensus 167 ~~~~~~~L~~Ld~~~~~~l~~~-~~-~~~v~~H~af~Yf~~~yGl~~~~~~~--~~~eps~~~l~~l~~~ik~~~v~~If 242 (291)
T 1pq4_A 167 LAAFLAELERLNQELGQILQPL-PQ-RKFIVFHPSWAYFARDYNLVQIPIEV--EGQEPSAQELKQLIDTAKENNLTMVF 242 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTC-SC-CEEEESSCCCHHHHHHTTCEEEESCB--TTBCCCHHHHHHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCC-CC-CEEEEECCchHHHHHHCCCEEeeccc--CCCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 344555555555555441 33 34 44666788899999999988776542 24444566554 456778899999
Q ss_pred EcCcchHHHHHHh
Q 036361 117 VDHLHSSLVLEAL 129 (485)
Q Consensus 117 ~~~~~~~~~~~~~ 129 (485)
++.....+..+.+
T Consensus 243 ~e~~~~~~~~~~i 255 (291)
T 1pq4_A 243 GETQFSTKSSEAI 255 (291)
T ss_dssp EETTSCCHHHHHH
T ss_pred EeCCCChHHHHHH
Confidence 9887666554443
No 172
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=21.61 E-value=1.4e+02 Score=27.30 Aligned_cols=55 Identities=9% Similarity=-0.045 Sum_probs=41.1
Q ss_pred EEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEcCcc
Q 036361 67 VSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 67 V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
..+....+-.-..+.++|.+.|..++.+-|...+......++..++++++++...
T Consensus 95 ~vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~~ 149 (372)
T 1p5j_A 95 HFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATCKVVGELL 149 (372)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEEeCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHhcCCEEEEECCCH
Confidence 4444555777777788889999887776666555666778899999999988643
No 173
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=21.48 E-value=1.9e+02 Score=26.42 Aligned_cols=35 Identities=11% Similarity=0.099 Sum_probs=18.3
Q ss_pred hccCceEEecCCCCCHHH--HHHHhhhcCCcEEEEcC
Q 036361 85 PMSGAILNNINTRLDAHN--LSVLLQHSESKLVFVDH 119 (485)
Q Consensus 85 ~~~G~~~v~l~~~~~~~~--l~~~l~~~~~~~ii~~~ 119 (485)
+.-|-.++..++...... ...+.+..+.+.+.++.
T Consensus 115 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 115 LKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp CCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred cCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc
Confidence 345555555555555432 33444556666666653
No 174
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=21.40 E-value=2.5e+02 Score=20.72 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=32.5
Q ss_pred HHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecC--CCCCHHH
Q 036361 53 ASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNIN--TRLDAHN 102 (485)
Q Consensus 53 A~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~--~~~~~~~ 102 (485)
+.+|.+.|+.+...+.+...+..+.+-++==+++.|...+.+- +..+...
T Consensus 47 ~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~aVl~wl~~l~~~~ 98 (119)
T 1ofu_X 47 HEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSHTVVSWLEPLSRAA 98 (119)
T ss_dssp HHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEEEEEECCSSCCHHH
T ss_pred HHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCccEEEECCCcCChHH
Confidence 5567778887777666666677777777777777776544432 3444444
No 175
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=21.18 E-value=3.4e+02 Score=24.78 Aligned_cols=55 Identities=13% Similarity=0.103 Sum_probs=36.9
Q ss_pred HHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc-eEEecCCCCCHHHHHHHhhhcCCcE
Q 036361 56 LSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA-ILNNINTRLDAHNLSVLLQHSESKL 114 (485)
Q Consensus 56 L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 114 (485)
|...++++|++|.|...-.+-.+++++|-. .|+ .++.++. +.+.+ .++++.+++.
T Consensus 178 l~~~~~~~g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~ 233 (398)
T 1kol_A 178 AVTAGVGPGSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDL--NPARL-AHAKAQGFEI 233 (398)
T ss_dssp HHHTTCCTTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEES--CHHHH-HHHHHTTCEE
T ss_pred HHHcCCCCCCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcC--CHHHH-HHHHHcCCcE
Confidence 445689999999999865567777777654 687 4555543 33443 4456778873
No 176
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=21.17 E-value=3e+02 Score=25.25 Aligned_cols=56 Identities=11% Similarity=0.013 Sum_probs=26.2
Q ss_pred cCCchhHHHHHHhhhccCceEEecCCCCCH--HHHHHHhhhcCCcEEEEcCcchHHHH
Q 036361 71 APNVPSMYELQFGVPMSGAILNNINTRLDA--HNLSVLLQHSESKLVFVDHLHSSLVL 126 (485)
Q Consensus 71 ~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~--~~l~~~l~~~~~~~ii~~~~~~~~~~ 126 (485)
..++.+.+.+.+.+++.|-.++..++.+.. ..+...++..+.++++++....+.+.
T Consensus 88 ~~sG~~ai~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~ 145 (403)
T 3cog_A 88 FASGLAATVTITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLE 145 (403)
T ss_dssp ESCHHHHHHHHHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHH
T ss_pred ECCHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHH
Confidence 334444444443334445444545555542 11333445566666666554333333
No 177
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=20.92 E-value=1.3e+02 Score=23.00 Aligned_cols=11 Identities=9% Similarity=0.006 Sum_probs=7.7
Q ss_pred cCCCcEEEeCC
Q 036361 27 YSDCPSIVYNN 37 (485)
Q Consensus 27 ~p~~~a~~~~~ 37 (485)
.|.++|++.-.
T Consensus 12 ~p~~IavIGas 22 (145)
T 2duw_A 12 STRTIALVGAS 22 (145)
T ss_dssp HCCCEEEESCC
T ss_pred CCCEEEEECcC
Confidence 47788887653
No 178
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=20.92 E-value=1.8e+02 Score=26.32 Aligned_cols=79 Identities=14% Similarity=0.078 Sum_probs=48.2
Q ss_pred eeeHHHHHHHH--HHHH-HHHHH-cCCCCC-CEEEEEcC-CchhHHHHHHhhhccCceEEecCC-CCCHHHHHHHhhhcC
Q 036361 39 TYTWSETHRRC--LQVA-SSLSS-VGIQRG-HVVSVVAP-NVPSMYELQFGVPMSGAILNNINT-RLDAHNLSVLLQHSE 111 (485)
Q Consensus 39 ~~Ty~~l~~~~--~~lA-~~L~~-~gi~~g-d~V~l~~~-~~~~~~~~~lA~~~~G~~~v~l~~-~~~~~~l~~~l~~~~ 111 (485)
.+++.+..-.. -..| +.|.+ .++++| ++|.|..- ...-.+++.+|- ..|+..+.+.. ....++....+++.+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcC
Confidence 47776643221 1222 23444 389999 99999987 566777777776 46886655532 222233344557788
Q ss_pred CcEEEEc
Q 036361 112 SKLVFVD 118 (485)
Q Consensus 112 ~~~ii~~ 118 (485)
++.++..
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8888754
No 179
>3e19_A FEOA; transcriptional regulator, metal-binding, iron uptake, beta- transcription regulator, metal binding protein; HET: GOL; 2.00A {Thermococcus thioreducens}
Probab=20.79 E-value=89 Score=20.79 Aligned_cols=23 Identities=22% Similarity=0.416 Sum_probs=19.5
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcC
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAP 72 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~ 72 (485)
..+.+.|.++|+.+|..|-+...
T Consensus 25 ~~~~~rL~~lGi~~G~~v~v~~~ 47 (77)
T 3e19_A 25 HNARQKLVSMGLTPGATIQVLES 47 (77)
T ss_dssp HHHHHHHHTTTCSTTCEEEEEEC
T ss_pred HHHHHHHHHCCCCCCCEEEEEEe
Confidence 46788899999999999988754
No 180
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=20.62 E-value=3.8e+02 Score=23.94 Aligned_cols=51 Identities=10% Similarity=-0.012 Sum_probs=22.0
Q ss_pred CCCEEEEEcCCchhHHHHHHhhhccCceEEecCC--C--CCHHHHHHHhhhcCCcEEE
Q 036361 63 RGHVVSVVAPNVPSMYELQFGVPMSGAILNNINT--R--LDAHNLSVLLQHSESKLVF 116 (485)
Q Consensus 63 ~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~--~--~~~~~l~~~l~~~~~~~ii 116 (485)
+||.|.+..+....+.- ++...|+.++.++. . ...+.+...++..+++.++
T Consensus 122 ~gd~vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~ 176 (397)
T 3f9t_A 122 EHPKIIVPITAHFSFEK---GREMMDLEYIYAPIKEDYTIDEKFVKDAVEDYDVDGII 176 (397)
T ss_dssp SSCEEEEETTCCTHHHH---HHHHHTCEEEEECBCTTSSBCHHHHHHHHHHSCCCEEE
T ss_pred CCeEEEECCcchhHHHH---HHHHcCceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEE
Confidence 45555555554443222 22223443333322 2 2455566555553444444
No 181
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=20.57 E-value=1.5e+02 Score=22.43 Aligned_cols=48 Identities=10% Similarity=0.102 Sum_probs=25.6
Q ss_pred CEEEEEcCCchhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCc
Q 036361 65 HVVSVVAPNVPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESK 113 (485)
Q Consensus 65 d~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~ 113 (485)
|.|.++.| .....-++..|..+|...+.+.+....+++....++.+.+
T Consensus 71 Dlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 71 DVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE 118 (138)
T ss_dssp CEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE
T ss_pred CEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE
Confidence 45555555 3333334445555665555555555555666666665554
No 182
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=20.46 E-value=3e+02 Score=24.73 Aligned_cols=13 Identities=8% Similarity=-0.268 Sum_probs=7.7
Q ss_pred cEEeccHHHHHHH
Q 036361 205 GVVHSHRGIFILT 217 (485)
Q Consensus 205 ~v~~s~~~~~~~~ 217 (485)
|+++..+.+....
T Consensus 215 G~~~~~~~~~~~~ 227 (393)
T 2huf_A 215 TPVSFSHRAVERY 227 (393)
T ss_dssp EEEEECHHHHHHH
T ss_pred EEEEECHHHHHHH
Confidence 5677666665433
No 183
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=20.40 E-value=2.7e+02 Score=25.24 Aligned_cols=22 Identities=5% Similarity=-0.183 Sum_probs=12.2
Q ss_pred CCCcccEEecc-HHHHHHHHHHH
Q 036361 200 TSSPKGVVHSH-RGIFILTANAL 221 (485)
Q Consensus 200 TG~pK~v~~s~-~~~~~~~~~~~ 221 (485)
.|.+-|.++.. +.+........
T Consensus 243 ~G~r~G~~~~~~~~~~~~l~~~~ 265 (399)
T 1c7n_A 243 AGMGMSNIIIKNPDIRERFTKSR 265 (399)
T ss_dssp GGGCCEEEECCCHHHHHHHHHHH
T ss_pred cchheEEEEECCHHHHHHHHHHH
Confidence 55566776654 55655544443
No 184
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=20.36 E-value=70 Score=24.62 Aligned_cols=39 Identities=8% Similarity=-0.033 Sum_probs=22.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCc
Q 036361 51 QVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGA 89 (485)
Q Consensus 51 ~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~ 89 (485)
++...|.+.|+.++..|.++|..+.....+...+...|.
T Consensus 67 ~l~~~l~~~~~~~~~~ivvyC~~G~rS~~aa~~L~~~G~ 105 (148)
T 2fsx_A 67 ELRDRIPADADQHERPVIFLCRSGNRSIGAAEVATEAGI 105 (148)
T ss_dssp HHHHHCC-------CCEEEECSSSSTHHHHHHHHHHTTC
T ss_pred HHHHHHhhccCCCCCEEEEEcCCChhHHHHHHHHHHcCC
Confidence 344444445777788888888887776666666777775
No 185
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=20.23 E-value=3.1e+02 Score=30.19 Aligned_cols=80 Identities=11% Similarity=-0.034 Sum_probs=60.9
Q ss_pred EeccHHHHHHHHHHHHH---hCCCCCCEEEEecchhhHhHHHHHHHHHhhcceEeecc-cCCHHHHHHHHHhcCceeeec
Q 036361 207 VHSHRGIFILTANALID---WAVPKQPVYLWTLPMFHANGWGYTWGMAAVGATNICLR-RFDASAISDLIQKHNVTHMCG 282 (485)
Q Consensus 207 ~~s~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~~ 282 (485)
.+|.+.+...+..+... .++++++++...++-+..+ ...+++++..|+..+..+ .+...++...++..++..++.
T Consensus 489 ~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~-vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~ 567 (1304)
T 2vsq_A 489 TLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLEL-VIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLT 567 (1304)
T ss_dssp EEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHH-HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEE
T ss_pred eEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHH-HHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEE
Confidence 58888887766555544 4788999999888865543 345788889999888876 467788999999999999887
Q ss_pred chHHH
Q 036361 283 APVVL 287 (485)
Q Consensus 283 ~p~~~ 287 (485)
.+...
T Consensus 568 ~~~~~ 572 (1304)
T 2vsq_A 568 HQEMK 572 (1304)
T ss_dssp CSTTC
T ss_pred Ccchh
Confidence 66543
No 186
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=20.22 E-value=1.7e+02 Score=26.55 Aligned_cols=56 Identities=9% Similarity=-0.089 Sum_probs=40.4
Q ss_pred EEEEEcCCchhHHHHHHhhhccCceEEecCCCC-CHHHHHHHhhhcCCcEEEEcCcc
Q 036361 66 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRL-DAHNLSVLLQHSESKLVFVDHLH 121 (485)
Q Consensus 66 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~ 121 (485)
...+....+-.-..+.++|.+.|..++.+-|.. .+..-...++..++++++++...
T Consensus 86 ~~vv~aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~ 142 (360)
T 2d1f_A 86 RAVLCASTGNTSASAAAYAARAGITCAVLIPQGKIAMGKLAQAVMHGAKIIQIDGNF 142 (360)
T ss_dssp SEEEECCSSHHHHHHHHHHHHHTCEEEEEECSSCCCHHHHHHHHHTTCEEEEBSSCH
T ss_pred CEEEEeCCcHHHHHHHHHHHHcCCcEEEEEcCCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 344445666666767788899999877766654 44555678899999999998753
No 187
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=20.21 E-value=1.8e+02 Score=21.86 Aligned_cols=53 Identities=8% Similarity=-0.054 Sum_probs=36.6
Q ss_pred eeeeHHHHHHHH----HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCce
Q 036361 38 TTYTWSETHRRC----LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAI 90 (485)
Q Consensus 38 ~~~Ty~~l~~~~----~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~ 90 (485)
..+.+.++.+.. ..+...+...++.++..|.++|..+.....+...+...|..
T Consensus 61 inip~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~ 117 (139)
T 3d1p_A 61 INVPYRSHPDAFALDPLEFEKQIGIPKPDSAKELIFYCASGKRGGEAQKVASSHGYS 117 (139)
T ss_dssp EECCTTTCTTGGGSCHHHHHHHHSSCCCCTTSEEEEECSSSHHHHHHHHHHHTTTCC
T ss_pred EEcCHHHhhhhccCCHHHHHHHHhccCCCCCCeEEEECCCCchHHHHHHHHHHcCCC
Confidence 345565654332 23444444457888999999999998888888888888864
No 188
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=20.20 E-value=1.2e+02 Score=26.24 Aligned_cols=40 Identities=10% Similarity=0.057 Sum_probs=29.3
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchh-HHHHHHhhhccCc
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPS-MYELQFGVPMSGA 89 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~-~~~~~lA~~~~G~ 89 (485)
..++..|.+.|+.+++.|.++|..+.. ...+.+.+...|.
T Consensus 72 ~~~~~~~~~~gi~~~~~ivvyc~~g~~~a~~a~~~L~~~G~ 112 (280)
T 1urh_A 72 ETFAVAMRELGVNQDKHLIVYDEGNLFSAPRAWWMLRTFGV 112 (280)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSSCSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCccHHHHHHHHHHcCC
Confidence 566777778899999999999987654 5555555666665
No 189
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=20.19 E-value=2.5e+02 Score=24.92 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=40.0
Q ss_pred HcCCCCCCEEEEEcCC-chhHHHHHHhhhccCceEEecCCCCCHHHHHHHhhhcCCcEEEEc
Q 036361 58 SVGIQRGHVVSVVAPN-VPSMYELQFGVPMSGAILNNINTRLDAHNLSVLLQHSESKLVFVD 118 (485)
Q Consensus 58 ~~gi~~gd~V~l~~~~-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~ 118 (485)
..++++|++|.|.... .+-..++.+|. ..|+.++.++. +.+++..+.++.++..++..
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~~ 202 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAG--GAEKCRFLVEELGFDGAIDY 202 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHTTCCSEEEET
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHcCCCEEEEC
Confidence 4689999999999884 56666665554 67887766643 35555555477788776653
No 190
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=20.16 E-value=1.6e+02 Score=26.70 Aligned_cols=57 Identities=7% Similarity=-0.132 Sum_probs=40.6
Q ss_pred EEEEEcCCchhHHHHHHhhhccCceEEecCCCC-CHHHHHHHhhhcCCcEEEEcCcch
Q 036361 66 VVSVVAPNVPSMYELQFGVPMSGAILNNINTRL-DAHNLSVLLQHSESKLVFVDHLHS 122 (485)
Q Consensus 66 ~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~~-~~~~l~~~l~~~~~~~ii~~~~~~ 122 (485)
...+....+-.-..+.++|.+.|..++.+-|.. .+..-...++..++++++++....
T Consensus 80 ~~vv~~SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~~k~~~~~~~GA~v~~v~~~~~ 137 (352)
T 2zsj_A 80 RAVICASTGNTSASAAAYAARAGLRAYVLLPKGAVAIGKLSQAMIYGAKVLAIQGTFD 137 (352)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHHHTTCEEEEESSCHH
T ss_pred CEEEEeCCchHHHHHHHHHHhcCCcEEEEECCCCCCHHHHHHHHHcCCEEEEECCCHH
Confidence 344455666666767788899999877665553 444556788899999999987533
No 191
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=20.16 E-value=1.2e+02 Score=26.08 Aligned_cols=39 Identities=15% Similarity=0.066 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCch-hHHHHHHhhhccC
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVP-SMYELQFGVPMSG 88 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~-~~~~~~lA~~~~G 88 (485)
..++..+.+.|+.+++.|.++|..+. ....+...+...|
T Consensus 67 ~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L~~~G 106 (271)
T 1e0c_A 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLLDVIG 106 (271)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHHHHcC
No 192
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=20.15 E-value=1.7e+02 Score=26.19 Aligned_cols=14 Identities=0% Similarity=-0.092 Sum_probs=6.5
Q ss_pred CCCCCEEEEEcCCc
Q 036361 61 IQRGHVVSVVAPNV 74 (485)
Q Consensus 61 i~~gd~V~l~~~~~ 74 (485)
+++||.|.+..+..
T Consensus 71 ~~~gd~Vl~~~~~~ 84 (375)
T 2fnu_A 71 SADRNEIITTPISF 84 (375)
T ss_dssp CTTSCEEEECSSSC
T ss_pred CCCCCEEEECCCcc
Confidence 44555554444333
No 193
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=20.08 E-value=3.1e+02 Score=24.67 Aligned_cols=69 Identities=14% Similarity=0.178 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 49 CLQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 49 ~~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
...+...+... +++||.|.+..+..... ...-++...|+.++.++.. ...+.+...++..++++|++..
T Consensus 95 t~al~~~~~~~-~~~gd~Vl~~~~~~~~~-~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~~ 167 (393)
T 1vjo_A 95 TAAMEATIANA-VEPGDVVLIGVAGYFGN-RLVDMAGRYGADVRTISKPWGEVFSLEELRTALETHRPAILALVH 167 (393)
T ss_dssp HHHHHHHHHHH-CCTTCEEEEEESSHHHH-HHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHHHhc-cCCCCEEEEEcCChhHH-HHHHHHHHcCCceEEEecCCCCCCCHHHHHHHHhhCCceEEEEec
No 194
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=20.07 E-value=1.2e+02 Score=26.31 Aligned_cols=40 Identities=13% Similarity=0.131 Sum_probs=32.7
Q ss_pred HHHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhh-ccCc
Q 036361 50 LQVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVP-MSGA 89 (485)
Q Consensus 50 ~~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~-~~G~ 89 (485)
..+...+.+.|+.++..|.++|..+.....+.+.+. .+|.
T Consensus 219 ~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~~~G~ 259 (285)
T 1uar_A 219 EELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGY 259 (285)
T ss_dssp HHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHHHcCC
Confidence 345566777899999999999999988888888887 7886
No 195
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=20.07 E-value=2.8e+02 Score=24.90 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCCCCEEEEEcCCchhHHHHHHhhhccCceEEecCCC----CCHHHHHHHhhhcCCcEEEEcC
Q 036361 51 QVASSLSSVGIQRGHVVSVVAPNVPSMYELQFGVPMSGAILNNINTR----LDAHNLSVLLQHSESKLVFVDH 119 (485)
Q Consensus 51 ~lA~~L~~~gi~~gd~V~l~~~~~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~ii~~~ 119 (485)
.+...+... +++||.|.+. .++.......-++...|+.++.++.. ...+.+...++..++++|++..
T Consensus 86 al~~~~~~~-~~~gd~vl~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 156 (393)
T 3kgw_A 86 AMETALFNL-LEPGDSFLTG-TNGIWGMRAAEIADRIGARVHQMIKKPGEHYTLQEVEEGLAQHKPVLLFLVH 156 (393)
T ss_dssp HHHHHHHHH-CCTTCEEEEE-ESSHHHHHHHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred HHHHHHHhc-CCCCCEEEEE-eCCchhHHHHHHHHHcCCceEEEeCCCCCCCCHHHHHHHHhhCCCcEEEEec
Done!