BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036362
(246 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 114 bits (284), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
S+ HS+R LH L P LIN L+D+ + A
Sbjct: 117 SFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
++ HS+R LH L P LIN L+D YT ++ L
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 113 bits (283), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
++ HS+R LH L P LIN L+D YT ++ L
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K+F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKDFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 113 bits (282), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 175
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 180
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 65
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 120
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 121 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 180
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 181 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 240
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 241 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 118 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 68
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 123
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 124 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 117
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 118 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 177
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 178 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 237
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 238 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
MEKY +E IG G YG YK + + E A + + L+ + +G+P + + +IS LKE+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60 YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
+ I + K + +FE+ L + +K LD+ TAK +L +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
+Y H R LH L P LIN + YT +I L
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
SVGCIFAEMV PL SE+ + + IFR++G P+ + P VT
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + EP L L+ +G+DLL KML+++P +RIT AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 119 AFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 63
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L +K+F+D + ++L+ L
Sbjct: 64 PNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 118
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 119 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 178
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 179 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 238
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 239 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L +K+F+D + ++L+ L
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEF-----LSMDLKDFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
MEKY +E IG G YG YK + + E A + + L+ + +G+P + + +IS LKE+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60 YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
+ I + K + +FE+ L + +K LD+ TAK +L +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
+Y H R LH L P LIN + YT ++ L
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
SVGCIFAEMV PL SE+ + + IFR++G P+ + P VT
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + EP L L+ +G+DLL KML+++P +RIT AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 134/293 (45%), Gaps = 59/293 (20%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAEN-AYQTVLLKADIIPDGVPISILTKISPLKEMD 59
MEKY +E IG G YG YK + + E A + + L+ + +G+P + + +IS LKE+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEGIPSTTIREISILKELK 58
Query: 60 YPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINN---PKTAK-----ILRVL 107
+ I + K + +FE+ L + +K LD+ TAK +L +
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEH-----LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 108 SYYHSNRCLHGRLNPYQALIN-------------------LSDYTVKIARLI-------- 140
+Y H R LH L P LIN + YT ++ L
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLM 173
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
SVGCIFAEMV PL SE+ + + IFR++G P+ + P VT
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK 233
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + EP L L+ +G+DLL KML+++P +RIT AL H Y+++
Sbjct: 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 111 bits (278), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ + + +K F+D + ++L+ L
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEH-----VHQDLKTFMDASALTGIPLPLIKSYLFQLLQGL 115
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSD-------------YTVKIARLI-------- 140
++ HS+R LH L P LIN L+D YT ++ L
Sbjct: 116 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 175
Query: 141 ------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 176 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 236 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 62
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVI-KNFLDIINNPKTA----KILRVLSYYH 111
P I + + +Y +FE+ + +L+K + + L I P ++L+ L++ H
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 112 SNRCLHGRLNPYQALIN------LSDYTVKIA---------------------------- 137
S+R LH L P LIN L+D+ + A
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 138 -----RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+ +
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 241
Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 242 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 136/291 (46%), Gaps = 49/291 (16%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVI-KNFLDIINNPKTA----KILRVLSYYH 111
P I + + +Y +FE+ + +L+K + + L I P ++L+ L++ H
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 112 SNRCLHGRLNPYQALIN------LSDYTVKIA---------------------------- 137
S+R LH L P LIN L+D+ + A
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 138 -----RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYC 192
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+ +
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS 243
Query: 193 YEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 244 FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 111 bits (277), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 57/293 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ L + +K F+D + ++L+ L
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 116
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 117 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 176
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 177 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++D
Sbjct: 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 110 bits (276), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 133/294 (45%), Gaps = 57/294 (19%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
E ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++P
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 62 LIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVLS 108
I + + +Y +FE+ L + +K F+D + ++L+ L+
Sbjct: 62 NIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116
Query: 109 YYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------- 137
+ HS+R LH L P LIN L+D+ + A
Sbjct: 117 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLG 176
Query: 138 --------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPF 189
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+ +
Sbjct: 177 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 236
Query: 190 IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 237 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 134/295 (45%), Gaps = 57/295 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
ME ++KVE IG G YG YK + ++ D +GVP + + +IS LKE+++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 64
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDI---------INNPKTAKILRVL 107
P I + + +Y +FE+ + + +K F+D + ++L+ L
Sbjct: 65 PNIVKLLDVIHTENKLYLVFEH-----VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGL 119
Query: 108 SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------ 137
++ HS+R LH L P LIN L+D+ + A
Sbjct: 120 AFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILL 179
Query: 138 ---------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
+ S+GCIFAEMV + L SE + IFR +G P E PGVT+
Sbjct: 180 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 239
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
+ + + +D + ++P L+ G LL +ML +P +RI+ AL H +++DV
Sbjct: 240 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 56/293 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
MEKY+K+E +G G YG YK ++ A + + L A+ +G+P + + +IS LKE+
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELH 77
Query: 60 YP----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYH 111
+P LI +++ + +FE+ +L+KV+ + + + ++LR +++ H
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
+R LH L P LIN SD +K+A
Sbjct: 137 QHRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI- 190
+ S+GCIFAEM+ +PL ++ + IF ++G P+ P V P
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL-PLWK 254
Query: 191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
++ E K + ++P G+DLL ML +P +RI+ DA+NH Y++D+
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 138/293 (47%), Gaps = 56/293 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAE-NAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
MEKY+K+E +G G YG YK ++ A + + L A+ +G+P + + +IS LKE+
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEGIPSTAIREISLLKELH 77
Query: 60 YP----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYH 111
+P LI +++ + +FE+ +L+KV+ + + + ++LR +++ H
Sbjct: 78 HPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIAR--------------------------------- 138
+R LH L P LIN SD +K+A
Sbjct: 137 QHRILHRDLKPQNLLIN-SDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSK 195
Query: 139 -------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI- 190
+ S+GCIFAEM+ +PL ++ + IF ++G P+ P V P
Sbjct: 196 KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL-PLWK 254
Query: 191 -YCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
++ E K + ++P G+DLL ML +P +RI+ DA+NH Y++D+
Sbjct: 255 QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 98.2 bits (243), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 127/295 (43%), Gaps = 61/295 (20%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
M+KY K+E IG G YG+ +K + ++ D +GVP S L +I LKE+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61 PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIIN---NPKTAK-----ILRVLS 108
I R + DK + +FE+ + +K + D N +P+ K +L+ L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 109 YYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------------- 137
+ HS LH L P LIN L+D+ + A
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 138 --------RLISVGCIFAEMV-IQEPL--SEDASESRERISIFRLMGEPSEETLPGVTTF 186
+ S GCIFAE+ PL D + +R IFRL+G P+EE P +T
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKR--IFRLLGTPTEEQWPSMTKL 233
Query: 187 FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ L ++P L G DLLQ +L+ NP +RI+ +AL H Y+ D
Sbjct: 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 62/293 (21%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEM 58
ME Y K++ +G G Y + YK + + +N A + + L+ + +G P + + ++S LK++
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTAIREVSLLKDL 57
Query: 59 DYPLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLD----IINNPKTA----KILRV 106
+ I + +K + +FEY L K +K +LD IIN ++LR
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEY-----LDKDLKQYLDDCGNIINMHNVKLFLFQLLRG 112
Query: 107 LSYYHSNRCLHGRLNPYQALIN------LSDYTVKIARLI-------------------- 140
L+Y H + LH L P LIN L+D+ + A+ I
Sbjct: 113 LAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL 172
Query: 141 -------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFF 187
VGCIF EM PL ++ + IFR++G P+EET PG+ +
Sbjct: 173 LGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE 232
Query: 188 PF-IYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
F Y Y + + L P L+ G DLL K+L+ + RI+ DA+ H ++
Sbjct: 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 123/293 (41%), Gaps = 57/293 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
M+KY K+E IG G YG+ +K + ++ D +GVP S L +I LKE+ +
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 61 PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIIN---NPKTAK-----ILRVLS 108
I R + DK + +FE+ + +K + D N +P+ K +L+ L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLG 115
Query: 109 YYHSNRCLHGRLNPYQALINLSD-------------------YTVKIARL---------- 139
+ HS LH L P LIN + Y+ ++ L
Sbjct: 116 FCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFG 175
Query: 140 ----------ISVGCIFAEMV-IQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFP 188
S GCIFAE+ PL + IFRL+G P+EE P +T
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ L ++P L G DLLQ +L+ NP +RI+ +AL H Y+ D
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 133/297 (44%), Gaps = 65/297 (21%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
+++YR++ +G G YG YK + V ++ + +GVP + + ++S LKE+ +
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQH 92
Query: 61 PLIFRKE----NDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA---------KILRVL 107
I + ++ ++ IFEY +K ++D NP + +++ +
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYA-----ENDLKKYMD--KNPDVSMRVIKSFLYQLINGV 145
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYT---------VKIAR-------------------- 138
++ HS RCLH L P L+++SD + +AR
Sbjct: 146 NFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRP 205
Query: 139 ---------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ S+ CI+AEM+++ PL SE + IF ++G P + T PGV
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGV 265
Query: 184 TTFFPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
T + + + K L +L L+ G+DLL ML ++P +RI+ +AL H Y+
Sbjct: 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 70/302 (23%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
++Y V IG G YG +K + +N + V LK +G+P+S + +++ L+ +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59 ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
D + R + + + +FE+ + + + +LD + P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
++LR L + HS+R +H L P L I L+D Y+ ++A
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
L SVGCIFAEM ++PL +S+ + I ++G P EE
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
P + + ++P + + D++ G DLL K L NP +RI+ AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 241 DV 242
D+
Sbjct: 302 DL 303
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 70/302 (23%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
++Y V IG G YG +K + +N + V LK +G+P+S + +++ L+ +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59 ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
D + R + + + +FE+ + + + +LD + P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
++LR L + HS+R +H L P L I L+D Y+ ++A
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
L SVGCIFAEM ++PL +S+ + I ++G P EE
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
P + + ++P + + D++ G DLL K L NP +RI+ AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Query: 241 DV 242
D+
Sbjct: 302 DL 303
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
+Y V IG G YG+ YK + ++ V LK+ +P +G+PIS + +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58 ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
MD R + + V +FE+ + + ++ +LD P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
+ LR L + H+N +H L P L+ S TVK+A
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
+ SVGCIFAEM ++PL SE+ + IF L+G P E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
P + FP P+ + ++P++E +G LL +ML NP +RI+ AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
Y
Sbjct: 290 SY 291
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
+Y V IG G YG+ YK + ++ V LK+ +P +G+PIS + +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58 ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
MD R + + V +FE+ + + ++ +LD P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
+ LR L + H+N +H L P L+ S TVK+A
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
+ SVGCIFAEM ++PL SE+ + IF L+G P E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
P + FP P+ + ++P++E +G LL +ML NP +RI+ AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
Y
Sbjct: 290 SY 291
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 126/302 (41%), Gaps = 81/302 (26%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIP---DGVPISILTKISPLKE-- 57
+Y V IG G YG+ YK + ++ V LK+ +P +G+PIS + +++ L+
Sbjct: 5 RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 58 ----------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK-------- 99
MD R + + V +FE+ + + ++ +LD P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAETIKD 116
Query: 100 -TAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR-------------------- 138
+ LR L + H+N +H L P L+ S TVK+A
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 139 ------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
+ SVGCIFAEM ++PL SE+ + IF L+G P E+
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 235
Query: 181 PGVTTF----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
P + FP P+ + ++P++E +G LL +ML NP +RI+ AL H
Sbjct: 236 PRDVSLPRGAFP------PRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 289
Query: 237 HY 238
Y
Sbjct: 290 SY 291
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 128/300 (42%), Gaps = 70/300 (23%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK---ADIIPDGVPISILTKISPLKEM 58
++Y V IG G YG +K + +N + V LK +G+P+S + +++ L+ +
Sbjct: 11 QQYECVAEIGEGAYGKVFKARD--LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 59 ------------DYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----- 101
D + R + + + +FE+ + + + +LD + P
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEH-----VDQDLTTYLDKVPEPGVPTETIK 123
Query: 102 ----KILRVLSYYHSNRCLHGRLNPYQAL------INLSD------YTVKIA-------- 137
++LR L + HS+R +H L P L I L+D Y+ ++A
Sbjct: 124 DMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTL 183
Query: 138 -----------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL 180
L SVGCIFAEM ++PL +S+ + I ++G P EE
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 181 PGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
P + + ++P + + D++ G DLL K L NP +RI+ AL+H Y++
Sbjct: 244 PRDVALPRQAFHSKSAQP--IEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 73/303 (24%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAEN--AYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
+++++E +G G Y + YK A + V L ++ +G P + + +IS +KE+ +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPSTAIREISLMKELKH 62
Query: 61 PLIFR-----KENDKLVYQIFEYTGLLNLRKVIKNFLD---IINNPK----------TAK 102
I R +KL +FE+ + +K ++D + N P+ +
Sbjct: 63 ENIVRLYDVIHTENKLTL-VFEF-----MDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 103 ILRVLSYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------- 137
+L+ L++ H N+ LH L P LIN L D+ + A
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRA 176
Query: 138 --------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ S GCI AEM+ +PL ++ + IF +MG P+E P V
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSV 236
Query: 184 TTFFPFIYCYEESEPKDL-AILLPD----LEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
T + ++ P+DL +L P L+ +D L +L++NP R++ AL+H +
Sbjct: 237 TKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW 296
Query: 239 YRD 241
+ +
Sbjct: 297 FAE 299
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 125/301 (41%), Gaps = 76/301 (25%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG------VPISILTKISPLK 56
+Y V IG G YG+ YK + ++ V LK+ +P+G +PIS + +++ L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARD---PHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 57 E------------MDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA--- 101
MD R + + V +FE+ + + ++ +LD P
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEH-----VDQDLRTYLDKAPPPGLPAET 121
Query: 102 ------KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIAR----------------- 138
+ LR L + H+N +H L P L+ S TVK+A
Sbjct: 122 IKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-SGGTVKLADFGLARIYSYQMALTPVV 180
Query: 139 ---------------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSE 177
+ SVGCIFAEM ++PL SE+ + IF L+G P E
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 178 ETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
+ P + + P+ + ++P++E +G LL +ML NP +RI+ AL H
Sbjct: 241 DDWPRDVSL--PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHS 298
Query: 238 Y 238
Y
Sbjct: 299 Y 299
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/298 (21%), Positives = 126/298 (42%), Gaps = 58/298 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI---SILTKISPLKE 57
MEKY K+ IG G YG +KC + Q V +K + + P+ L +I LK+
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRN---RDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQ 58
Query: 58 MDYP-------LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYY 110
+ +P + RK LV++ ++T L L + + + + T + L+ +++
Sbjct: 59 LKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 111 HSNRCLHGRLNP------YQALINLSDYTVKIARLIS----------------------- 141
H + C+H + P ++I L D+ ARL++
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFG--FARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 142 ------------VGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTFF 187
+GC+FAE++ PL S+ + I + +G+ P + + +F
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVSV 245
+ + + + L + P++ + LL+ L ++P ER+T L+H Y+ ++ +
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREI 294
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 123/307 (40%), Gaps = 86/307 (28%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKA------DIIPDGVPISILTKISPL 55
++Y K++ +G G++ + YK + +N Q V +K DG+ + L +I L
Sbjct: 10 KRYEKLDFLGEGQFATVYKARD---KNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLL 66
Query: 56 KEMDYPLIF-------RKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAK-----I 103
+E+ +P I K N LV+ E +L +IK+ ++ P K
Sbjct: 67 QELSHPNIIGLLDAFGHKSNISLVFDFMET----DLEVIIKDN-SLVLTPSHIKAYMLMT 121
Query: 104 LRVLSYYHSNRCLHGRLNPYQALIN------LSDYTVK--------------IAR----- 138
L+ L Y H + LH L P L++ L+D+ + + R
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAP 181
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE------ 178
+ +VGCI AE++++ P S+ + IF +G P+EE
Sbjct: 182 ELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMC 241
Query: 179 TLPGVTTF--FPFIYCYE--ESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDAL 234
+LP TF FP I + + DL +DL+Q + NP RIT AL
Sbjct: 242 SLPDYVTFKSFPGIPLHHIFSAAGDDL-----------LDLIQGLFLFNPCARITATQAL 290
Query: 235 NHHYYRD 241
Y+ +
Sbjct: 291 KMKYFSN 297
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 112/299 (37%), Gaps = 73/299 (24%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKIS-PLKEMDYP 61
+Y +++ IG G YG + +AY V I P T L+E+
Sbjct: 44 RYTQLQYIGEGAYG--------MVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 62 LIFRKENDKLVYQIFEYTGLLNLRKV--IKNFLDI----------INNPKTA----KILR 105
L FR EN + I + L +R V +++ ++ ++N +ILR
Sbjct: 96 LRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR 155
Query: 106 VLSYYHSNRCLHGRLNPYQALINLS------------------DYT-------------- 133
L Y HS LH L P LIN + D+T
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 134 ----------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
K + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKD----LAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y +S P A L P + +DLL +ML NP +RITV +AL H Y
Sbjct: 276 INMKARNYL--QSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPY 332
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 126 LINLSDYTVKIARLISVGCIFAEM--VIQE------------------PLSEDASE---- 161
LI L + K + S GCIFAE+ ++Q PLS D +
Sbjct: 222 LILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVH 281
Query: 162 ---SRERISI-FRLMGEPSEETLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDL 215
+R++++I F ++G P+E+ L + +I + +P +L P + G++L
Sbjct: 282 EKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINL 341
Query: 216 LQKMLRVNPKERITVNDALNHHYYRDV 242
L+ ML+ NP +RIT++ AL+H Y +DV
Sbjct: 342 LESMLKFNPNKRITIDQALDHPYLKDV 368
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 63/118 (53%), Gaps = 3/118 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT + + SVGCI AEM+ + L + + + I ++ G P E + +
Sbjct: 195 EVILNWMRYT-QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRL 253
Query: 184 TT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ ++ E E KD A +L + P V+LL+KML ++ ++R+T +AL H Y+
Sbjct: 254 QSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++ ++YT I L S+GC+F E+++ +PL + + + I ++MG P++E + +
Sbjct: 211 ELMLGATEYTPSID-LWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM 269
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPA-GVDLLQKMLRVNPKERITVNDALNHHYY 239
+ + + + KD +LP+ P+ +DLL+++LR P RI +A+ H ++
Sbjct: 270 NPHYTEVR-FPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 31/142 (21%)
Query: 131 DYTVKIARLISVGCIFAEMVIQE--------------------PLSEDASE-------SR 163
+YT I + S GCIFAE++ PLS D + +R
Sbjct: 233 NYTNSID-IWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNR 291
Query: 164 ERISI-FRLMGEPSEETLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKML 220
++++I F ++G P EE L +T +I + + DL+ + G+DLL+ ML
Sbjct: 292 DQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESML 351
Query: 221 RVNPKERITVNDALNHHYYRDV 242
R N ++RIT++ AL+H Y +DV
Sbjct: 352 RFNAQKRITIDKALSHPYLKDV 373
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 72/181 (39%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----ARLI---------------- 140
++LR L Y HS LH L P IN D +KI AR++
Sbjct: 128 QLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVT 187
Query: 141 ----------------------SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
+ GCIFAEM+ + L A E + I + EE
Sbjct: 188 KWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEE 247
Query: 179 TLPGVTTFFPFIYCYEESEP-KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
+ + P + +EP K L LLP + VD L+++L +P +R+T +AL+H
Sbjct: 248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHP 307
Query: 238 Y 238
Y
Sbjct: 308 Y 308
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 42/186 (22%)
Query: 92 LDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQA--LINLSDYTVKIARLISVGCIFAEM 149
++++ P T + R L+ + R Y+A LI L + + + S+GCIFAE+
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRW-------YRAPELILLQENYTEAIDVWSIGCIFAEL 277
Query: 150 --VIQE------------------PLSEDASE----------SRERIS-IFRLMGEPSEE 178
+I+E PLS D +R++++ IF ++G PSEE
Sbjct: 278 LNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE 337
Query: 179 TLPGVTT--FFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
+ + +I + + E DLA P + LL++ML NP +RIT+N+ L H
Sbjct: 338 DIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAH 397
Query: 237 HYYRDV 242
++++V
Sbjct: 398 PFFKEV 403
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
Y
Sbjct: 312 Y 312
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
Y
Sbjct: 312 Y 312
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
+ KY K+ IG+G +G +K Q V LK ++ +G PI+ L +I L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58 MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
+ + + +Y +F++ +L ++ N L + ++++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
+L Y H N+ LH + LI L+D+ + A
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
L GCI AEM + P+ + +E + I +L G + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
P V + + + L + D P +DL+ K+L ++P +RI +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
LNH ++
Sbjct: 311 LNHDFF 316
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 238 Y 238
Y
Sbjct: 316 Y 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
+ KY K+ IG+G +G +K Q V LK ++ +G PI+ L +I L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58 MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
+ + + +Y +F++ +L ++ N L + ++++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
+L Y H N+ LH + LI L+D+ + A
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
L GCI AEM + P+ + +E + I +L G + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
P V + + + L + D P +DL+ K+L ++P +RI +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
LNH ++
Sbjct: 311 LNHDFF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
+ KY K+ IG+G +G +K Q V LK ++ +G PI+ L +I L+
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 72
Query: 58 MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
+ + + +Y +F++ +L ++ N L + ++++
Sbjct: 73 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 131
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
+L Y H N+ LH + LI L+D+ + A
Sbjct: 132 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
L GCI AEM + P+ + +E + I +L G + E
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
P V + + + L + D P +DL+ K+L ++P +RI +DA
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 309
Query: 234 LNHHYY 239
LNH ++
Sbjct: 310 LNHDFF 315
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
Y
Sbjct: 312 Y 312
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 217 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
S GCI AE+ ++ P+ + + IF ++G P S+ L + + P Y +S P
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
L + P + P G+DLLQ+ML +P +RIT +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 217 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 276 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 332
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 197 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 255
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 256 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 312
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 238 Y 238
Y
Sbjct: 314 Y 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
S GCI AE+ ++ P+ + + IF ++G P S+ L + + P Y +S P
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
L + P + P G+DLLQ+ML +P +RIT +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 202 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 203 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 261
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 262 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 318
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 194 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 252
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 253 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 309
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 201 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 316
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 202 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 260
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 261 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 195 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 253
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 53/117 (45%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G PS+E L +
Sbjct: 199 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 257
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 258 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 314
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 141 SVGCIFAEMVIQEPLSEDASESRERISIFRLMGEP-SEETLPGVTTFFPFIYCYEESEP- 198
S GCI AE+ ++ P+ + + IF ++G P S+ L + + P Y +S P
Sbjct: 208 SCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIES--PRAREYIKSLPM 265
Query: 199 ---KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
L + P + P G+DLLQ+ML +P +RIT +AL H Y
Sbjct: 266 YPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPY 308
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 260 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 319
Query: 238 Y 238
Y
Sbjct: 320 Y 320
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 66/181 (36%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L + Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 238 Y 238
Y
Sbjct: 312 Y 312
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 116/306 (37%), Gaps = 73/306 (23%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADII---PDGVPISILTKISPLKE 57
+ KY K+ IG+G +G +K Q V LK ++ +G PI+ L +I L+
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARH---RKTGQKVALKKVLMENEKEGFPITALREIKILQL 73
Query: 58 MDYPLIFR------------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR 105
+ + + +Y +F++ +L ++ N L + ++++
Sbjct: 74 LKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQ 132
Query: 106 VL----SYYHSNRCLHGRLNPYQALIN------LSDYTVKIA------------------ 137
+L Y H N+ LH + LI L+D+ + A
Sbjct: 133 MLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 138 -------------------RLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEE 178
L GCI AEM + P+ + +E + I +L G + E
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 179 TLPGVTTF-----FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDA 233
P V + + + L + D P +DL+ K+L ++P +RI +DA
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD--PYALDLIDKLLVLDPAQRIDSDDA 310
Query: 234 LNHHYY 239
LNH ++
Sbjct: 311 LNHDFF 316
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ ++N YT I + SVGCI AEM+ P+ + I ++G P +E L +
Sbjct: 195 EIMLNSKGYTKSID-IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCI 253
Query: 184 TTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
Y + L P+ + +DLL KML NP +RI V AL H Y
Sbjct: 254 INLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY 310
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 65/181 (35%), Gaps = 44/181 (24%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLS------------------DYT---------- 133
+ILR L Y HS LH L P L+N + D+T
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 134 --------------VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEET 179
K + SVGCI AEM+ P+ + I ++G PS+E
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 180 LPGVTTFFPFIYCYEESEPKDLAI--LLPDLEPAGVDLLQKMLRVNPKERITVNDALNHH 237
L Y + L P+ + +DLL KML NP +RI V AL H
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 238 Y 238
Y
Sbjct: 314 Y 314
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT--TFFPFIYCYEES 196
+ SVGCI AEM+ + L + + I ++ G P E + + +I ++
Sbjct: 207 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 266
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
KD L P P DLL+KML ++ +R+T AL H ++
Sbjct: 267 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT--TFFPFIYCYEES 196
+ SVGCI AEM+ + L + + I ++ G P E + + +I ++
Sbjct: 225 IWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQT 284
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
KD L P P DLL+KML ++ +R+T AL H ++
Sbjct: 285 PRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71 LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
L+YQI ++ +I L +N KIL H++ + G + Y+
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYR 191
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
A ++N Y + + SVGCI AE++ L + I RL+G P E L
Sbjct: 192 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 250
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+++ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 251 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71 LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
L+YQI ++ +I L +N KIL H++ + G + Y+
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYR 195
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
A ++N Y + + SVGCI AE++ L + I RL+G P E L
Sbjct: 196 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 254
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+++ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 255 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDXELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 104 LRVLSYY---HSNRCLHGRLNP--YQA---LINLSDYTVKIARLISVGCIFAEMVIQEPL 155
L++L +Y H++ + G + Y+A ++N Y + + SVGCI AE++ L
Sbjct: 164 LKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTL 222
Query: 156 SEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGV 213
+ I RL+G P E L +++ Y ++ PK + A + P V
Sbjct: 223 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
Query: 214 DLLQKMLRVNPKERITVNDALNHHYY 239
DLL+KML ++ +RIT AL H Y+
Sbjct: 283 DLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
+ILR L Y HS +H L P +N L+ +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
+ + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 80/180 (44%), Gaps = 12/180 (6%)
Query: 71 LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
L+YQI ++ +I L +N KIL H++ + G + Y+
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYR 189
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
A ++N Y + + SVGCI AE++ L + I RL+G P E L
Sbjct: 190 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 248
Query: 182 GVTTFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+++ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN------LSDYTV--------------------- 134
+ILR L Y HS +H L P +N + DY +
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPE 192
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
+ + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 253 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
+ILR L Y HS +H L P +N L+ +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
+ + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 38/176 (21%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALIN-----------LSDYTV---------------- 134
+ILR L Y HS +H L P +N L+ +T
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPE 199
Query: 135 ---------KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
+ + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 260 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGXVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 131 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 189
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 144 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 202
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 145 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 203
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILGFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDGGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMXGYVATRWYRAP 214
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 132 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 190
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 12/180 (6%)
Query: 71 LVYQIFEYTGLLNLRKVIKNFLD----IINNPKTAKILRVLSYYHSNRCLHGRLNP--YQ 124
L+YQI ++ +I L +N KIL H++ + G + Y+
Sbjct: 150 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYR 209
Query: 125 A---LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP 181
A ++N Y + + SVGCI AE++ L + I RL+G P E L
Sbjct: 210 APEIMLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 268
Query: 182 GVTTFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+++ +I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 269 KISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 138 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 196
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 130 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 188
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 272 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 190 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 249 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 198
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 199 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 258
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDRGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDAGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 271 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 156 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 214
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 135 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 193
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMAGFVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 153 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 211
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 212 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 271
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ +I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 272 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 71/177 (40%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 139 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 197
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 185 TFFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 152 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 210
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 211 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 270
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ +I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 271 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 133 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 191
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ +I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKI-----AR------------------ 138
+ILR L Y HS +H L P +N D +KI AR
Sbjct: 143 QILRGLKYIHSADIIHRDLKPSNLAVN-EDCELKILDFGLARHTDDEMTGYVATRWYRAP 201
Query: 139 --------------LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVT 184
+ SVGCI AE++ L + I RL+G P E L ++
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 185 TFFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ +I + + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 259 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ L + I RL+G P E L +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 186 FFPFIYCYEESE-PK-DLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y ++ PK + A + P VDLL+KML ++ +RIT AL H Y+
Sbjct: 259 ESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 153 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 210
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 211 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 270
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 271 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 310
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 164 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 221
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 222 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 281
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 282 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 165 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID-VWSA 222
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 223 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 282
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 283 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 180 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 237
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 238 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 297
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 298 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 337
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 160 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 217
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 218 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 277
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 278 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 317
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 156 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 213
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 214 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 273
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 274 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 313
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 164 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 221
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 222 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 281
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 282 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 321
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 171 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 228
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 229 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 288
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 289 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 328
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 188 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 245
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 246 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 305
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P P + L ++L P R+T +A H ++
Sbjct: 306 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 186 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 243
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 303
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P P + L ++L P R+T +A H ++
Sbjct: 304 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 231 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 288
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 289 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 348
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 349 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 388
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 152 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSID-VWSA 209
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 269
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 270 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 309
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 157 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 214
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 215 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 274
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 275 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 314
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 190 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSI-DVWSA 247
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 248 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 307
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P P + L ++L P R+T +A H ++
Sbjct: 308 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 93 DIINNPKTAKILRVLSYYHSNRCLHGRLNP-------YQA---LINLSDYTVKIARLISV 142
+++ +P TA +L++ + + + + G N Y+A + +DYT I + S
Sbjct: 186 NLLLDPDTA-VLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSI-DVWSA 243
Query: 143 GCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF-FPFIYCYEESE 197
GC+ AE+++ +P+ S + + I +++G P+ E + P T F FP I + ++
Sbjct: 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTK 303
Query: 198 PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ P P + L ++L P R+T +A H ++ ++
Sbjct: 304 -----VFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDEL 343
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
+ ++YT I + S GC+ AE++ +PL S + + I +++G PS E + +
Sbjct: 213 IFGATNYTTNID-IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNP 271
Query: 186 FFPFIYCYEESEPKDLA-ILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ + + + P + + P P +DL+ ++L P R+T +AL H ++ ++
Sbjct: 272 NY-MEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 257
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 207 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 263
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 264 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 319
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 258
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 259 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 202 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 258
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 259 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 314
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 265
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 201 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 257
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 258 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 313
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 302
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 265 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 320
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 209 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 265
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 266 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 321
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ + L + + I ++G PS E L +++
Sbjct: 192 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 250
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y +S P KDL+ + P +DLL +ML ++ +R++ +AL H Y+
Sbjct: 251 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 306
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ + L + + I ++G PS E L +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y +S P KDL+ + P +DLL +ML ++ +R++ +AL H Y+
Sbjct: 259 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 7/118 (5%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + SVGCI AE++ + L + + I ++G PS E L +++
Sbjct: 200 MLNWMHYN-QTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISS 258
Query: 186 FFPFIYCYEESEP----KDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
Y +S P KDL+ + P +DLL +ML ++ +R++ +AL H Y+
Sbjct: 259 EHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYF 314
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 246 IWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRNYVENRP 302
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K + P L P + DLL KML ++P +RI+V+DAL H Y
Sbjct: 303 KYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPY 358
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTT 185
++N Y + + + SVGCI AE++ L + I RL G P + + +
Sbjct: 223 MLNWMHYNMTV-DIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPS 281
Query: 186 FFP--FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+I + ++ A + P VDLL+KML ++ +RIT ++AL H Y+
Sbjct: 282 HEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYF 337
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP--GV 183
+++L +YT I L SVGCIF EM+ + L + + I ++G PS + G
Sbjct: 234 MLSLHEYTQAI-DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 292
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
+I +P + P + + LL +MLR P RI+ AL H +
Sbjct: 293 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 347
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLP--GV 183
+++L +YT I L SVGCIF EM+ + L + + I ++G PS + G
Sbjct: 235 MLSLHEYTQAI-DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGA 293
Query: 184 TTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
+I +P + P + + LL +MLR P RI+ AL H +
Sbjct: 294 ERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPF 348
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 115 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 174
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 175 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 234
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 235 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLNKYRIELDPQLEALVGRHSRK 294
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 295 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 342
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 95 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 154
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 155 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 275 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 95 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 154
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 155 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 214
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 215 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 274
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 275 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 322
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 96 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 155
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 156 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 215
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 216 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 275
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 276 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 323
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 62/235 (26%)
Query: 63 IFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNP 122
I R ++ K IFEY + + + D ++L+ L Y HS +H + P
Sbjct: 94 IVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIMHRDVKP 153
Query: 123 YQALINL-------------------SDYTVKIAR--------------------LISVG 143
+ +I+ +Y V++A + S+G
Sbjct: 154 HNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLG 213
Query: 144 CIFAEMVI-QEPLSEDASESRERISIFRLMG---------------EPSEETLPGVTTFF 187
C+FA M+ +EP + + I +++G +P E L G +
Sbjct: 214 CMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLNKYRIELDPQLEALVGRHSRK 273
Query: 188 PFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
P++ + ++ + L + P +D L K+LR + +ER+T +A+ H Y++ V
Sbjct: 274 PWL-KFMNADNQHL------VSPEAIDFLDKLLRYDHQERLTALEAMTHPYFQQV 321
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/292 (21%), Positives = 116/292 (39%), Gaps = 56/292 (19%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG---VPISILTKISPLKE 57
MEKY + L+G G YG KC ++ + V +K + D V + +I LK+
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRN---KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 58 MDYPLIF-------RKENDKLVYQIFEYTGLLNLRKVIKNFLDI-INNPKTAKILRVLSY 109
+ + + +K+ LV++ ++T L +L ++ N LD + +I+ + +
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 110 YHSNRCLHGRLNPYQALIN------LSDYTV----------------------------- 134
HS+ +H + P L++ L D+
Sbjct: 140 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGD 199
Query: 135 ----KIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGE--PSEETLPGVTTFFP 188
K + ++GC+ EM + EPL S+ + I +G P + L F
Sbjct: 200 VKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFA 259
Query: 189 FIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
+ E E + L P L +DL +K L ++P +R + L+H +++
Sbjct: 260 GVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
K+ + S GC+ AEM ++ L ++ + I ++G P E + ++ P Y
Sbjct: 212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS--PSARDY 269
Query: 194 EESE-----PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ + ++P +P +DL+ KML NP+ RI+ AL H Y+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 134 VKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCY 193
K+ + S GC+ AEM ++ L ++ + I ++G P E + ++ P Y
Sbjct: 212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS--PSARDY 269
Query: 194 EESE-----PKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ + ++P +P +DL+ KML NP+ RI+ AL H Y+
Sbjct: 270 LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 20/122 (16%)
Query: 132 YTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL----PGVTTF- 186
YT + + SVGCIFAEM++ EP+ + + + I R++G PS E L P T
Sbjct: 209 YTTAVD-IWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVD 267
Query: 187 ------FPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
P+ + + KD DLL +L+ P+ER+ +AL H Y+
Sbjct: 268 LYNSKGIPWSNVFSDHSLKDAK--------EAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Query: 241 DV 242
++
Sbjct: 320 EL 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI E+V + + + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ---PTVRNYVENRP 264
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
K I +L P + DLL KML ++P +RI+V++AL H Y
Sbjct: 265 KYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 320
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI E+V + + + + +G PS E + + P + Y E+ P
Sbjct: 206 IWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ---PTVRNYVENRP 262
Query: 199 KDLAILLPDLEPAGV----------------DLLQKMLRVNPKERITVNDALNHHY 238
I +L P + DLL KML ++P +RI+V++AL H Y
Sbjct: 263 AYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPY 318
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL K + GV + ++ + +P I R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S+ +KIA SV + + P + E++ ++ L
Sbjct: 139 KPENLLLG-SNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 196
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G+ F Y + PD G DL+ ++L+ N +R+T+
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 232 DALNHHYYRDVVSVP 246
+ L H + + S P
Sbjct: 257 EVLEHPWIKANSSKP 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 107/255 (41%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL K + GV + ++ + +P I R
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-LSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
P L+ S+ +KIA SV + + L + E R E++ ++ L
Sbjct: 139 KPENLLLG-SNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 196
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G+ F Y + PD G DL+ ++L+ N +R+T+
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLLKHNASQRLTLA 256
Query: 232 DALNHHYYRDVVSVP 246
+ L H + + S P
Sbjct: 257 EVLEHPWIKANSSKP 271
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 23/133 (17%)
Query: 124 QALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGV 183
+ L+ + YT I + S+GCI E++ +P+ +S + I ++ PS E + +
Sbjct: 200 EILLGSTKYTKGID-MWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESI 258
Query: 184 TTFFPFIYCYEESEPKDLAI--------------LLPDLEPAG------VDLLQKMLRVN 223
+ PF ES + + I LL + P +DLL K+L+ N
Sbjct: 259 QS--PFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFN 316
Query: 224 PKERITVNDALNH 236
P +RI+ NDAL H
Sbjct: 317 PNKRISANDALKH 329
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 1 MEKYRKVELIGRGKYGSFYKC------EEDVAENAYQTVLLKADIIPDGVPISILTKISP 54
+ KY V+ +G+G YG +K E + + D I ILT++S
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSG 67
Query: 55 LKEMDYPL-IFRKENDKLVYQIFEYTGLLNLRKVIK-NFLDIINNPKTA-KILRVLSYYH 111
+ + L + R +ND+ VY +F+Y +L VI+ N L+ ++ ++++V+ Y H
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIA 137
S LH + P L+N ++ VK+A
Sbjct: 127 SGGLLHRDMKPSNILLN-AECHVKVA 151
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
++Y++V+ +G G YG C++ + AE A + ++ K+ + ++L +++ LK++D
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 60 YPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
+P I + K N LV +++ L + + + F ++ ++L +Y H
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 139
Query: 113 NRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVIQEPL 155
+ +H L P ALI + D+ + K+ + A V+++
Sbjct: 140 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 199
Query: 156 SEDASESRERISIFRLM-------GEPSEETL----PGVTTFFPFIYCYEESEPKDLAIL 204
E + ++ L+ G+ +E L G +F P + E K L L
Sbjct: 200 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 259
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
ML P +RI+ +ALNH +
Sbjct: 260 --------------MLTYEPSKRISAEEALNHPW 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV--AENAYQTVLLKADIIPDGVPISILTKISPLKEMD 59
++Y++V+ +G G YG C++ + AE A + ++ K+ + ++L +++ LK++D
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIK-IIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 60 YPLIFR-------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHS 112
+P I + K N LV +++ L + + + F ++ ++L +Y H
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHK 122
Query: 113 NRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVIQEPL 155
+ +H L P ALI + D+ + K+ + A V+++
Sbjct: 123 HNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKY 182
Query: 156 SEDASESRERISIFRLM-------GEPSEETL----PGVTTFFPFIYCYEESEPKDLAIL 204
E + ++ L+ G+ +E L G +F P + E K L L
Sbjct: 183 DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKL 242
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
ML P +RI+ +ALNH +
Sbjct: 243 --------------MLTYEPSKRISAEEALNHPW 262
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 114/280 (40%), Gaps = 53/280 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
E Y++V+ +G G YG C + V +++ + +L +++ LK +D+P
Sbjct: 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHP 96
Query: 62 LIFRKENDKLVYQIFE----YTGLLNLRKVIKNFLDIINNPK---------TAKILRVLS 108
I + +Y FE Y ++ K + F +II+ K ++L ++
Sbjct: 97 NIMK------LYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVT 150
Query: 109 YYHSNRCLHGRLNP---------YQALINLSDYTV--------KIARLISVGCIFAEMVI 151
Y H + +H L P ALI + D+ + K+ + A V+
Sbjct: 151 YLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL 210
Query: 152 QEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAIL 204
++ E + +F L+ G+ +E L V Y ++ E K+++
Sbjct: 211 RKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVE---KGKYTFDSPEWKNVS-- 265
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS 244
DL+++ML+ + + RI+ AL H + +++ S
Sbjct: 266 -----EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
L SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 202 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 258
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 259 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 314
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
P L+ S +KIA + P S A+ E R E
Sbjct: 138 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 188
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
++ ++ L G E L G F Y + PD G DL+ ++L+ N
Sbjct: 189 KVDLWSL-GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 247
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
P +R + + L H + S P
Sbjct: 248 PSQRPMLREVLEHPWITANSSKP 270
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 107/268 (39%), Gaps = 40/268 (14%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
++Y+ ++G+G +G C++ + + V+ K + S+L ++ LK++D+
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 61 PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
P I + +Y+ FE YTG ++I K F ++ ++L +
Sbjct: 92 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 145
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
+Y H N+ +H L P L+ I R+I G + +D + I+
Sbjct: 146 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFG--LSTHFEASKKMKDKIGTAYYIA 202
Query: 168 IFRLMG---EPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPDLEP--- 210
L G E + GV + C ++ E LP +
Sbjct: 203 PEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE 262
Query: 211 AGVDLLQKMLRVNPKERITVNDALNHHY 238
+ DL++KML P RI+ DAL+H +
Sbjct: 263 SAKDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
L SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 213 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 269
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 270 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 325
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
P L+ S +KIA + P S A+ E R E
Sbjct: 135 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
++ ++ L G E L G F Y + PD G DL+ ++L+ N
Sbjct: 186 KVDLWSL-GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
P +R + + L H + S P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
L SVGCI EMV + L + + +G P E + + P + Y E+ P
Sbjct: 208 LWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 115/275 (41%), Gaps = 45/275 (16%)
Query: 4 YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
Y E+IG+G + +C E + A + V + G+ L + + + M +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
P L+ +D ++Y +FE+ +L ++ F+ + + + +IL L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 110 YHSNRCLHGRLNPYQAL---------INLSDYTVKI----ARLISVGCIFA------EMV 150
H N +H + P L + L D+ V I + L++ G + E+V
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVV 205
Query: 151 IQEPLSEDASESRERISIFRLMGEPSEETLPGVTT----FFPFIYCYEESEPKDLAILLP 206
+EP + + +F L+ LP T F I + P+ +
Sbjct: 206 KREPYGKPVDVWGCGVILFILL----SGCLPFYGTKERLFEGIIKGKYKMNPRQWS---- 257
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + DL+++ML ++P ERITV +ALNH + ++
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
++Y+ ++G+G +G C++ + + V+ K + S+L ++ LK++D+
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
P I + +Y+ FE YTG ++I K F ++ ++L +
Sbjct: 86 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
+Y H N+ +H L P L+ I R+I G E + + +++I
Sbjct: 140 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 190
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
+ E + GV + C ++ E LP
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
+ + DL++KML P RI+ DAL+H +
Sbjct: 251 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
++Y+ ++G+G +G C++ + + V+ K + S+L ++ LK++D+
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 61 PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
P I + +Y+ FE YTG ++I K F ++ ++L +
Sbjct: 110 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 163
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
+Y H N+ +H L P L+ I R+I G E + + +++I
Sbjct: 164 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 214
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
+ E + GV + C ++ E LP
Sbjct: 215 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 274
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
+ + DL++KML P RI+ DAL+H +
Sbjct: 275 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 107/274 (39%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
++Y+ ++G+G +G C++ + + V+ K + S+L ++ LK++D+
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 61 PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
P I + +Y+ FE YTG ++I K F ++ ++L +
Sbjct: 109 PNIMK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 162
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
+Y H N+ +H L P L+ I R+I G E + + +++I
Sbjct: 163 TYMHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKMKDKIG 213
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
+ E + GV + C ++ E LP
Sbjct: 214 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 273
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
+ + DL++KML P RI+ DAL+H +
Sbjct: 274 WKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 195
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 196 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 254
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 255 REVLEHPWITANSSKP 270
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPXLR 257
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 258 EVLEHPWITANSSKP 272
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 133
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 134 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 191
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 192 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 250
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 251 REVLEHPWITANSSKP 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 138 KPENLLLG-SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 256 EVLEHPWITANSSKP 270
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
E+Y V ++G+G +G KC++ + + Y ++ + +IL ++ LK++D+P
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
I + E+ Y + E YTG ++IK + A+I++ ++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
+ +H L P L+ + I ++I G + Q +D + I+ L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
G E + GV + P Y E E A LP + DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
++KML +P RIT L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 139 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 196
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 197 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 255
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 256 REVLEHPWITANSSKP 271
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
E+Y V ++G+G +G KC++ + + Y ++ + +IL ++ LK++D+P
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
I + E+ Y + E YTG ++IK + A+I++ ++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
+ +H L P L+ + I ++I G + Q +D + I+ L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
G E + GV + P Y E E A LP + DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
++KML +P RIT L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 101/248 (40%), Gaps = 23/248 (9%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 195
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 196 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 254
Query: 231 NDALNHHY 238
+ L H +
Sbjct: 255 REVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 192
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 251
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 252 REVLEHPWITANSSKP 267
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTL--DYLPPEMIEGRMHDEKVDLWSL 192
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 251
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 252 REVLEHPWITANSSKP 267
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 197
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 198 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 256
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 257 REVLEHPWITANSSKP 272
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMVIQ----EPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 137 KPENLLLG-SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 194
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 255 EVLEHPWITANSSKP 269
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 253 EVLEHPWITANSSKP 267
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 253 EVLEHPWITANSSKP 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 258 EVLEHPWITANSSKP 272
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 100/247 (40%), Gaps = 21/247 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 138 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHY 238
+ L H +
Sbjct: 256 EVLEHPW 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 218
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 219 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 277
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 278 REVLEHPWITANSSKP 293
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 138 KPENLLLG-SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 195
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 196 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 255
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 256 EVLEHPWITANSSKP 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 253 EVLEHPWITANSSKP 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 103/256 (40%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 151
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 152 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 209
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 210 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 268
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 269 REVLEHPWITANSSKP 284
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 135 KPENLLLG-SAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSL- 192
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 193 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 252
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 253 EVLEHPWITANSSKP 267
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 4 YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
Y E+IG+G + +C E + A + V + G+ L + + + M +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
P L+ +D ++Y +FE+ +L ++ F+ + + + +IL L Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIF 169
H N +H + P+ L+ + + + +L G + IQ L E + R+
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFG-----VAIQ--LGESGLVAGGRVGTP 199
Query: 170 RLM----------GEPSEETLPGVTTFFPFIYC---YEESEPKDLAIL----------LP 206
M G+P + GV F C Y E I+
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 259
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + DL+++ML ++P ERITV +ALNH + ++
Sbjct: 260 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 111/275 (40%), Gaps = 45/275 (16%)
Query: 4 YRKVELIGRGKYGSFYKC--EEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM-DY 60
Y E+IG+G + +C E + A + V + G+ L + + + M +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNL-----RKVIKNFL--DIINNPKTAKILRVLSY 109
P L+ +D ++Y +FE+ +L ++ F+ + + + +IL L Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 110 YHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIF 169
H N +H + P+ L+ + + + +L G + IQ L E + R+
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPV-KLGGFG-----VAIQ--LGESGLVAGGRVGTP 197
Query: 170 RLM----------GEPSEETLPGVTTFFPFIYC---YEESEPKDLAIL----------LP 206
M G+P + GV F C Y E I+
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWS 257
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRD 241
+ + DL+++ML ++P ERITV +ALNH + ++
Sbjct: 258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 137 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSL- 194
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 195 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 254
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 255 EVLEHPWITANSSKP 269
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARLISVGC---------IFAEMVIQEPLSEDASESRERISIFRL 171
P L+ S +KIA C + + P + E++ ++ L
Sbjct: 136 KPENLLLG-SAGELKIADF-GWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSL 193
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 194 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 252
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 253 REVLEHPWITANSSKP 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 104/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARL-ISVGCIFAEMV----IQEPLSEDASESR---ERISIFRLM 172
P L+ S +KIA SV + + L + E R E++ ++ L
Sbjct: 136 KPENLLLG-SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 193
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 254 EVLEHPWITANSSKP 268
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 136 KPENLLLG-SAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL- 193
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 194 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 253
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 254 EVLEHPWITANSSKP 268
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 103/263 (39%), Gaps = 37/263 (14%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS + +H +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKKVIHRDI 134
Query: 121 NPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDAS-------------ESR---E 164
P L+ S +KIA + P S A+ E R E
Sbjct: 135 KPENLLLG-SAGELKIADF--------GWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDE 185
Query: 165 RISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVN 223
++ ++ L G E L G F Y + PD G DL+ ++L+ N
Sbjct: 186 KVDLWSL-GVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLISRLLKHN 244
Query: 224 PKERITVNDALNHHYYRDVVSVP 246
P +R + + L H + S P
Sbjct: 245 PSQRPMLREVLEHPWITANSSKP 267
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G P E + + P + Y E+ P
Sbjct: 209 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 265
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 266 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 321
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 100/248 (40%), Gaps = 23/248 (9%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E + VL KA + GV + ++ + +P I R
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 131
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 132 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 189
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 190 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 248
Query: 231 NDALNHHY 238
+ L H +
Sbjct: 249 REVLEHPW 256
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G P E + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EM+ L + + +G P E + + P + Y E+ P
Sbjct: 210 IWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ---PTVRTYVENRP 266
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 267 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 322
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 120/319 (37%), Gaps = 99/319 (31%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP------LI 63
+GRG YG YK + ++ L + I G+ +S +I+ L+E+ +P +
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQ--IEGTGISMSACREIALLRELKHPNVISLQKV 86
Query: 64 FRKENDKLVYQIFEYT-----GLLNLRKVIKNFLDIINNPKTA------KILRVLSYYHS 112
F D+ V+ +F+Y ++ + K + P+ +IL + Y H+
Sbjct: 87 FLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA 146
Query: 113 NRCLHGRLNP--------------------------------------------YQA--- 125
N LH L P Y+A
Sbjct: 147 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPEL 206
Query: 126 LINLSDYTVKIARLISVGCIFAEMVIQEPL----SEDASESR-----ERISIFRLMGEPS 176
L+ YT K + ++GCIFAE++ EP+ ED S + IF +MG P+
Sbjct: 207 LLGARHYT-KAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA 265
Query: 177 E------ETLPGVTTFF------PFIYC----YEESEPKDLAILLPDLEPAGVDLLQKML 220
+ + +P +T + C Y E + PD + LLQK+L
Sbjct: 266 DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK-----VKPDSK--AFHLLQKLL 318
Query: 221 RVNPKERITVNDALNHHYY 239
++P +RIT A+ Y+
Sbjct: 319 TMDPIKRITSEQAMQDPYF 337
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 31/263 (11%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
E+Y V ++G+G +G KC++ + + Y ++ + +IL ++ LK++D+P
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 62 LIFR----KENDKLVYQIFE-YTGLLNLRKVIKNFLDIINNPKTAKILRV----LSYYHS 112
I + E+ Y + E YTG ++IK + A+I++ ++Y H
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHK 139
Query: 113 NRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERISIFRLM 172
+ +H L P L+ + I ++I G + Q +D + I+ L
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDI-KIIDFG--LSTCFQQNTKMKDRIGTAYYIAPEVLR 196
Query: 173 G---EPSEETLPGVTTFF-----PFIYCYEE------SEPKDLAILLPD---LEPAGVDL 215
G E + GV + P Y E E A LP + DL
Sbjct: 197 GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDL 256
Query: 216 LQKMLRVNPKERITVNDALNHHY 238
++KML +P RIT L H +
Sbjct: 257 IRKMLTFHPSLRITATQCLEHPW 279
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 102/256 (39%), Gaps = 23/256 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY + K ++ L + +TA ++ LSY HS R +H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEPLSEDASESR---ERISIFRL 171
P L+ ++D+ + S + + L + E R E++ ++ L
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTL--DYLPPEMIEGRMHDEKVDLWSL 197
Query: 172 MGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITV 230
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 198 -GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPML 256
Query: 231 NDALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 257 REVLEHPWITANSSKP 272
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 102/255 (40%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY L + + ++ L + +TA ++ LSY HS R +H +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 161 KPENLLLG-SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSL- 218
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 219 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 278
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 279 EVLEHPWITANSSKP 293
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 106/274 (38%), Gaps = 52/274 (18%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDV-AENAYQTVLLKADIIPDGVPISILTKISPLKEMDY 60
++Y+ ++G+G +G C++ + + V+ K + S+L ++ LK++D+
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 61 PLIFRKENDKLVYQIFE-----------YTGLLNLRKVI--KNFLDIINNPKTAKILRVL 107
P I + +Y+ FE YTG ++I K F ++ ++L +
Sbjct: 86 PNIXK------LYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGI 139
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS 167
+Y H N+ +H L P L+ I R+I G E + + +++I
Sbjct: 140 TYXHKNKIVHRDLKPENLLLESKSKDANI-RIIDFGL--------STHFEASKKXKDKIG 190
Query: 168 ---------IFRLMGEPSEETLPGVTTFFPFIYC-----------YEESEPKDLAILLPD 207
+ E + GV + C ++ E LP
Sbjct: 191 TAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQ 250
Query: 208 LEP---AGVDLLQKMLRVNPKERITVNDALNHHY 238
+ + DL++K L P RI+ DAL+H +
Sbjct: 251 WKKVSESAKDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 101/255 (39%), Gaps = 21/255 (8%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDYPLIFRK-- 66
+G+GK+G+ Y E ++ VL KA + GV + ++ + +P I R
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 67 --ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA----KILRVLSYYHSNRCLHGRL 120
+ VY I EY + K ++ L + +TA ++ LSY HS R +H +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQK-LSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 121 NPYQALINLSDYTVKIARL-ISVGC-------IFAEMVIQEPLSEDASESRERISIFRLM 172
P L+ S +KIA SV + + P + E++ ++ L
Sbjct: 140 KPENLLLG-SAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSL- 197
Query: 173 GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVN 231
G E L G F Y + PD G DL+ ++L+ NP +R +
Sbjct: 198 GVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLR 257
Query: 232 DALNHHYYRDVVSVP 246
+ L H + S P
Sbjct: 258 EVLEHPWITANSSKP 272
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN------ 128
+FEY + +++ + D ++L+ L Y HS +H + P+ +I+
Sbjct: 118 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKL 177
Query: 129 -------------LSDYTVKIAR--------------------LISVGCIFAEMVIQ-EP 154
+Y V++A + S+GC+ A M+ + EP
Sbjct: 178 RLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 237
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + FI+ S
Sbjct: 238 FFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIH----S 293
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +DLL K+LR + ++R+T +A+ H Y+ VV
Sbjct: 294 ENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVV 334
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/227 (19%), Positives = 88/227 (38%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALIN------ 128
+FEY + +++ + D ++L+ L Y HS +H + P+ +I+
Sbjct: 113 VFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKKL 172
Query: 129 -------------LSDYTVKIAR--------------------LISVGCIFAEMVIQ-EP 154
+Y V++A + S+GC+ A M+ + EP
Sbjct: 173 RLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREP 232
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + FI+ S
Sbjct: 233 FFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIH----S 288
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +DLL K+LR + ++R+T +A+ H Y+ VV
Sbjct: 289 ENRHL------VSPEALDLLDKLLRYDHQQRLTAKEAMEHPYFYPVV 329
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVG I EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVG I EM+ L + + +G PS E + + P + Y E+ P
Sbjct: 208 IWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ---PTVRTYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEP 198
+ SVGCI EMV + L + + +G P + + P + Y E+ P
Sbjct: 208 IWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQ---PTVRNYVENRP 264
Query: 199 K----DLAILLPD-LEPA-----------GVDLLQKMLRVNPKERITVNDALNHHY 238
K L PD L PA DLL KML ++ +RI+V++AL H Y
Sbjct: 265 KYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPY 320
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 112/267 (41%), Gaps = 45/267 (16%)
Query: 10 IGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI-SILTKISPLKEMDYPLIFRKEN 68
+G G +G + EE + + V+ + VP+ I +I LK +D+P I +
Sbjct: 30 LGSGAFGDVHLVEE--RSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIK--- 84
Query: 69 DKLVYQIFE-YTGLLNLRKVIKN--FLDIINNPKT--------------AKILRVLSYYH 111
++++FE Y + + + + L+ I + + +++ L+Y+H
Sbjct: 85 ---IFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 112 SNRCLHGRLNPYQALINLSDYTVKIARLISVGCIFAEMVIQEPLSEDASESRERIS--IF 169
S +H L P L + I ++I G AE+ + S +A+ + ++ +F
Sbjct: 142 SQHVVHKDLKPENILFQDTSPHSPI-KIIDFG--LAELFKSDEHSTNAAGTALYMAPEVF 198
Query: 170 -RLMGEPSEETLPGVTTFFPFIYCY-------EESEPK------DLAILLPDLEPAGVDL 215
R + + GV +F C EE + K + A+ L P VDL
Sbjct: 199 KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDL 258
Query: 216 LQKMLRVNPKERITVNDALNHHYYRDV 242
L++ML +P+ R + L+H +++
Sbjct: 259 LKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ LI+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 24/29 (82%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNH 236
L P+ + LLQ+ML+V+PK+RI++ + LNH
Sbjct: 233 LSPSSILLLQQMLQVDPKKRISMKNLLNH 261
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 110 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 169
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 170 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 229
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 230 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 285
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 286 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 231 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 286
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 287 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 111 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 170
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 171 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 230
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 231 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 286
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 287 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 327
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 117 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 176
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 177 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 236
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 237 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 292
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 293 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 333
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYPVV 328
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 68/227 (29%)
Query: 75 IFEYTGLLNLRKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINL----- 129
+FE+ + +++ + D +IL+ L Y HS +H + P+ +I+
Sbjct: 112 VFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKL 171
Query: 130 --------------SDYTVKIAR--------------------LISVGCIFAEMVI-QEP 154
+Y V++A + S+GC+ A M+ +EP
Sbjct: 172 RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEP 231
Query: 155 LSEDASESRERISIFRLMG---------------EPSEETLPGVTT---FFPFIYCYEES 196
+ + I +++G +P + G + + F++ S
Sbjct: 232 FFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVH----S 287
Query: 197 EPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVV 243
E + L + P +D L K+LR + + R+T +A+ H Y+ VV
Sbjct: 288 ENQHL------VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 328
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNHHY 238
P DL+ KML +NP +RIT ++AL H +
Sbjct: 235 PEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 19/35 (54%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
L +D L+ LR NP ERIT DAL H + D
Sbjct: 295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT 329
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNHHY 238
P DL+ KML +NP +RIT ++AL H +
Sbjct: 235 PEAKDLINKMLTINPAKRITASEALKHPW 263
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNHHY--YRDVVS 244
P DL+ KML +NP +RIT +AL H + +R V+
Sbjct: 242 PEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVA 278
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNHHY--YRDVVS 244
P DL+ KML +NP +RIT +AL H + +R V+
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVA 289
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 30/138 (21%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI-------Y 191
+ S+GCI AE++ PL E + + L+G PS++ L F+ Y
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRY 341
Query: 192 CYEES----------------------EPKDLAILLPDL-EPAGVDLLQKMLRVNPKERI 228
C + E ++ L +P +D L++ L +P R+
Sbjct: 342 CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401
Query: 229 TVNDALNHHYYRDVVSVP 246
T AL H + R + P
Sbjct: 402 TPGQALRHPWLRRRLPKP 419
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 229
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 230 DQITSGKYNFIPEVWA--------------EVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 237 HYYRD 241
+ +D
Sbjct: 276 PWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 59 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 115
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 116 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 175
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 176 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 228
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 229 DQITSGKYNFIPEVWA--------------EVSEKALDLVKKLLVVDPKARFTTEEALRH 274
Query: 237 HYYRD 241
+ +D
Sbjct: 275 PWLQD 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 66 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 122
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 123 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 182
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 183 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 235
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 236 DQITSGKYNFIPEVWA--------------EVSEKALDLVKKLLVVDPKARFTTEEALRH 281
Query: 237 HYYRD 241
+ +D
Sbjct: 282 PWLQD 286
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 41/182 (22%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPI-----SILTKISPLK 56
E + +E +G G YGS YK + + Q V +K VP+ I+ +IS ++
Sbjct: 29 EVFDVLEKLGEGSYGSVYKA---IHKETGQIVAIKQ------VPVESDLQEIIKEISIMQ 79
Query: 57 EMDYPLIFR------KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILRV---- 106
+ D P + + K D ++ + EY G ++ +I+ + + A IL+
Sbjct: 80 QCDSPHVVKYYGSYFKNTD--LWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKG 137
Query: 107 LSYYHSNRCLHGRLNPYQALIN---------------LSDYTVKIARLISVGCIFAEMVI 151
L Y H R +H + L+N L+D K +I A VI
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVI 197
Query: 152 QE 153
QE
Sbjct: 198 QE 199
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 34.3 bits (77), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 30/132 (22%), Positives = 50/132 (37%), Gaps = 30/132 (22%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI-------Y 191
+ S+GCI AE++ PL E + + L+G PS++ L F+ Y
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRY 341
Query: 192 CYEES----------------------EPKDLAILLPDL-EPAGVDLLQKMLRVNPKERI 228
C + E ++ L +P +D L++ L +P R+
Sbjct: 342 CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401
Query: 229 TVNDALNHHYYR 240
T AL H + R
Sbjct: 402 TPGQALRHPWLR 413
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 229
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 230 DQITSGKYNFIPEVWA--------------EVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 237 HYYRD 241
+ +D
Sbjct: 276 PWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 60 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 116
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 117 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 176
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 177 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 229
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 230 DQITSGKYNFIPEVWA--------------EVSEKALDLVKKLLVVDPKARFTTEEALRH 275
Query: 237 HYYRD 241
+ +D
Sbjct: 276 PWLQD 280
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 49/251 (19%), Positives = 101/251 (40%), Gaps = 23/251 (9%)
Query: 7 VELIGRGKYGSFYKCEEDVAENAY---QTVLLKADIIPDGVPISILTKISPLKEMDYPLI 63
V +G+GK+G+ Y E +N + VL K+ + +GV + +I + +P I
Sbjct: 19 VRPLGKGKFGNVYLARE--KQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNI 76
Query: 64 FRKEN----DKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTAKILR----VLSYYHSNRC 115
R N K +Y + E+ L K ++ + ++A + L Y H +
Sbjct: 77 LRMYNYFHDRKRIYLMLEFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCHERKV 135
Query: 116 LHGRLNP------YQALINLSDYTVKI-ARLISVGCIFAEMVIQEPLSEDASESRERISI 168
+H + P Y+ + ++D+ + A + + + P + E++ +
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDL 195
Query: 169 FRLMGEPSEETLPGVTTFFPFIYCYEESEPKDLAILLPD-LEPAGVDLLQKMLRVNPKER 227
+ G E L G+ F + ++ + P L DL+ K+LR +P +R
Sbjct: 196 W-CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQR 254
Query: 228 ITVNDALNHHY 238
+ + + H +
Sbjct: 255 LPLKGVMEHPW 265
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G GK+ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 199 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 255
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 256 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 315
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 316 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 368
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 369 DQITSGKYNFIPEVW--------------AEVSEKALDLVKKLLVVDPKARFTTEEALRH 414
Query: 237 HYYRD 241
+ +D
Sbjct: 415 PWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 73/245 (29%)
Query: 46 ISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK----TA 101
+++ T+I LK++++P I + +N + +Y +L L + + F ++ N + T
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKN---FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATC 241
Query: 102 KI-----LRVLSYYHSNRCLHGRLNPYQALINLS--DYTVKIAR---------------- 138
K+ L + Y H N +H L P L++ D +KI
Sbjct: 242 KLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL 301
Query: 139 -----------LISVG---------CIFAEMVIQEPLSE--DASESRERISIFRLMGEPS 176
L+SVG C +++ LS SE R ++S+
Sbjct: 302 CGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSL-------K 354
Query: 177 EETLPGVTTFFPFIYCYEESEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNH 236
++ G F P ++ ++ +DL++K+L V+PK R T +AL H
Sbjct: 355 DQITSGKYNFIPEVW--------------AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
Query: 237 HYYRD 241
+ +D
Sbjct: 401 PWLQD 405
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 244 INPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 105/278 (37%), Gaps = 47/278 (16%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPIS-ILTKISPLKE 57
+ Y E +G G++ KC + Y +K + GV I +++ L+E
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 58 MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA---KILRVLSYY 110
+ +P I EN V I E L + + + T +IL + Y
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 111 HSNRCLHGRLNPYQALI---NLSDYTVK-----IARLISVGCIFA-----------EMVI 151
HS R H L P ++ N+ + +K IA I G F E+V
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 152 QEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAIL 204
EPL +A + + L+ GE +ETL ++ Y ++E
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN---YDFDEE-------Y 234
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ D ++++L +PK R+T+ +L H + + +
Sbjct: 235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.7 bits (73), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 264 INPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 238 INPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 262 INPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYY 239
+ P L+QKML+ +P R T+N+ LN ++
Sbjct: 240 INPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|1KFS|A Chain A, Dna Polymerase I Klenow Fragment (e.c.2.7.7.7) Mutant/dna
Complex
pdb|1KRP|A Chain A, Dna Polymerase I Klenow Fragment (E.C.2.7.7.7) MutantDNA
Complex
pdb|1KSP|A Chain A, Dna Polymerase I Klenow Fragment (E.C.2.7.7.7) MutantDNA
Complex
pdb|2KFN|A Chain A, Klenow Fragment With Bridging-Sulfur Substrate And
Manganese
pdb|2KFZ|A Chain A, Klenow Fragment With Bridging-Sulfur Substrate And Zinc
Only
pdb|2KZM|A Chain A, Klenow Fragment With Normal Substrate And Zinc And
Manganese
pdb|2KZZ|A Chain A, Klenow Fragment With Normal Substrate And Zinc Only
pdb|1QSL|A Chain A, Klenow Fragment Complexed With Single-Stranded Substrate
And Europium (Iii) Ion
pdb|1D9D|A Chain A, Crystall Structure Of The Complex Of Dna Polymerase I
Klenow Fragment With Short Dna Fragment Carrying 2'-0-
Aminopropyl-Rna Modifications 5'-D(Tcg)-Ap(Auc)-3'
pdb|1D9F|A Chain A, Crystal Structure Of The Complex Of Dna Polymerase I
Klenow Fragment With Dna Tetramer Carrying
2'-O-(3-Aminopropyl)- Rna Modification
5'-D(Tt)-Ap(U)-D(T)-3'
Length = 605
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Query: 31 QTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNL 84
QT+L + I P G P + + L +DYPL I EY GL L
Sbjct: 264 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPL---------PKVILEYRGLAKL 313
Query: 85 RKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLN 121
+ + L ++ NPKT RV + YH GRL+
Sbjct: 314 KSTYTDKLPLMINPKTG---RVHTSYHQAVTATGRLS 347
>pdb|1KLN|A Chain A, Dna Polymerase I Klenow Fragment (E.C.2.7.7.7) MutantDNA
Complex
Length = 605
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Query: 31 QTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNL 84
QT+L + I P G P + + L +DYPL I EY GL L
Sbjct: 264 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPL---------PKVILEYRGLAKL 313
Query: 85 RKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLN 121
+ + L ++ NPKT RV + YH GRL+
Sbjct: 314 KSTYTDKLPLMINPKTG---RVHTSYHQAVTATGRLS 347
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 150 GIIHRDLKPENILLN 164
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 30/138 (21%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETLPGVTTFFPFI-------Y 191
+ S+GCI AE++ PL E + + L+G P ++ L F+ Y
Sbjct: 282 MWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRY 341
Query: 192 CYEES----------------------EPKDLAILLPDL-EPAGVDLLQKMLRVNPKERI 228
C + E ++ L +P +D L++ L +P R+
Sbjct: 342 CTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRM 401
Query: 229 TVNDALNHHYYRDVVSVP 246
T AL H + R + P
Sbjct: 402 TPGQALRHPWLRRRLPKP 419
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|1D8Y|A Chain A, Crystal Structure Of The Complex Of Dna Polymerase I
Klenow Fragment With Dna
Length = 605
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Query: 31 QTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNL 84
QT+L + I P G P + + L +DYPL I EY GL L
Sbjct: 264 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPL---------PKVILEYRGLAKL 313
Query: 85 RKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLN 121
+ + L ++ NPKT RV + YH GRL+
Sbjct: 314 KSTYTDKLPLMINPKTG---RVHTSYHQAVTATGRLS 347
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 153 GIIHRDLKPENILLN 167
>pdb|1DPI|A Chain A, Structure Of Large Fragment Of Escherichia Coli Dna
Polymerase I Complexed With DTMP
pdb|1KFD|A Chain A, Crystal Structures Of The Klenow Fragment Of Dna
Polymerase I Complexed With Deoxynucleoside Triphosphate
And Pyrophosphate
Length = 605
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 19/97 (19%)
Query: 31 QTVLLKADII------PDGVPISILTKISPLKEMDYPLIFRKENDKLVYQIFEYTGLLNL 84
QT+L + I P G P + + L +DYPL I EY GL L
Sbjct: 264 QTILFEKQGIKPLKKTPGGAPSTSEEVLEELA-LDYPL---------PKVILEYRGLAKL 313
Query: 85 RKVIKNFLDIINNPKTAKILRVLSYYHSNRCLHGRLN 121
+ + L ++ NPKT RV + YH GRL+
Sbjct: 314 KSTYTDKLPLMINPKTG---RVHTSYHQAVTATGRLS 347
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 155 GIIHRDLKPENILLN 169
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 150 GIIHRDLKPENILLN 164
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 134 GIIHRDLKPENILLN 148
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 129
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 130 GIIHRDLKPENILLN 144
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.7 bits (73), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 150 GIIHRDLKPENILLN 164
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 152 GIIHRDLKPENILLN 166
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 149 GIIHRDLKPENILLN 163
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYY 239
DL+QKML +P +RIT+ +AL H ++
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 18/146 (12%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM---D 59
+Y V+ +G G +G +C + A + V + ++ D + ++I L+ + D
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTD 72
Query: 60 YPLIFRK-------ENDKLVYQIFEYTGLLNLRKVIKNF-----LDIINNPKTAKILRVL 107
FR E+ + +FE GL + +N LD I +I + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK-MAYQICKSV 131
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYT 133
++ HSN+ H L P L SDYT
Sbjct: 132 NFLHSNKLTHTDLKPENILFVQSDYT 157
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 153 GIIHRDLKPENILLN 167
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 149 GIIHRDLKPENILLN 163
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 127
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 128 GIIHRDLKPENILLN 142
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 128
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 129 GIIHRDLKPENILLN 143
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYY 239
DL+QKML +P +RIT+ +AL H ++
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 18/146 (12%)
Query: 3 KYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEM---D 59
+Y V+ +G G +G +C + A + V + ++ D + ++I L+ + D
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTD 72
Query: 60 YPLIFRK-------ENDKLVYQIFEYTGLLNLRKVIKNF-----LDIINNPKTAKILRVL 107
FR E+ + +FE GL + +N LD I +I + +
Sbjct: 73 PNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK-MAYQICKSV 131
Query: 108 SYYHSNRCLHGRLNPYQALINLSDYT 133
++ HSN+ H L P L SDYT
Sbjct: 132 NFLHSNKLTHTDLKPENILFVQSDYT 157
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 126
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 127 GIIHRDLKPENILLN 141
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 246
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 247 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 150 GIIHRDLKPENILLN 164
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 131
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 132 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 191
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 246
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 247 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNH 236
P +L+ +ML +NP +RIT ++AL H
Sbjct: 235 PEAKNLINQMLTINPAKRITAHEALKH 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
L P+ + LL+ ML+V+P +R T+ D H +++
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN---YEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQ-TVLLKADIIPDGVPISILTKISPLKEMDY 60
E ++ +++G G + + E Y +L K II + + + + +D+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 61 P----LIFRKENDKLVYQIFEYTG---LLNLRKVIKNFLDIINNPKTAKILRVLSYYHSN 113
P L F ++D+ +Y Y LL + I +F + TA+I+ L Y H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 114 RCLHGRLNPYQALIN 128
+H L P L+N
Sbjct: 157 GIIHRDLKPENILLN 171
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSALAK 249
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 250 DF-------IRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDALNHHY 238
P +L+ +ML +NP +RIT + AL H +
Sbjct: 262 PEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN---YEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN---YEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL---PGVTTFF 187
+ S+GCI EM EPL A+E + I ++G P L P FF
Sbjct: 241 MWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 292
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL---PGVTTFF 187
+ S+GCI EM EPL A+E + I ++G P L P FF
Sbjct: 241 MWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 292
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
+ P D ++ +L+ P++R+TV+DAL H + +
Sbjct: 277 VSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.6 bits (70), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 139 LISVGCIFAEMVIQEPLSEDASESRERISIFRLMGEPSEETL---PGVTTFF 187
+ S+GCI EM EPL A+E + I ++G P L P FF
Sbjct: 222 MWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFF 273
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 104/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G++ KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 31.2 bits (69), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLL-KADIIPDGVPISILTKISPLKEMDY 60
E Y V++IGRG +G ++ Y LL K ++I + + +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 61 PLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHSN 113
P + + ++DK +Y + EY +L ++ N+ D+ TA+++ L HS
Sbjct: 135 PWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSM 193
Query: 114 RCLHGRLNPYQALIN------LSDYTVKIARLISVGCIFAEMVIQEP 154
+H + P L++ L+D+ + ++ G + + + P
Sbjct: 194 GLIHRDVKPDNMLLDKHGHLKLADFGTCM-KMDETGMVHCDTAVGTP 239
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 30.8 bits (68), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 17/126 (13%)
Query: 7 VELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD-----GVPISILTKISPLKEM-DY 60
VEL+G G YG YK + + D+ D I++L K S + + Y
Sbjct: 29 VELVGNGTYGQVYKGRH--VKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATY 86
Query: 61 PLIFRKEN----DKLVYQIFEYTGLLNLRKVIKNFL-DIINNPKTA----KILRVLSYYH 111
F K+N D ++ + E+ G ++ +IKN + + A +ILR LS+ H
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 112 SNRCLH 117
++ +H
Sbjct: 147 QHKVIH 152
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 103/274 (37%), Gaps = 47/274 (17%)
Query: 4 YRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPI-SILTKISPLKEMD 59
Y E +G G + KC E Y +K GV I ++S LKE+
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 60 YPLIFR----KENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKT---AKILRVLSYYHS 112
+P + EN V I E L + + T +IL + Y HS
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHS 132
Query: 113 NRCLHGRLNPYQALI---NLSDYTVKI-----ARLISVGCIFA-----------EMVIQE 153
+ H L P ++ N+ +KI A I G F E+V E
Sbjct: 133 LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE 192
Query: 154 PLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAILLP 206
PL +A + + L+ G+ +ETL V+ Y +E+ + + L
Sbjct: 193 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAV---NYEFEDEYFSNTSAL-- 247
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
D ++++L +PK+R+T+ D+L H + +
Sbjct: 248 -----AKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS 244
++ P L++++L +PK+RIT AL H ++ +S
Sbjct: 233 NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 270
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTV---LLKADIIPDGVPISILTKISPLKEM 58
+++ ++G+G++GS + + + ++ V +LKADII L + + +KE
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 59 DYPLIFR 65
D+P + +
Sbjct: 83 DHPHVAK 89
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 207 DLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDVVS 244
++ P L++++L +PK+RIT AL H ++ +S
Sbjct: 250 NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS 287
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 191 YCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVNDALNHHYY 239
Y E +P +L LE + DL+++ML +P +RIT+ +AL H ++
Sbjct: 320 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 104/278 (37%), Gaps = 47/278 (16%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPIS-ILTKISPLKE 57
+ Y E +G G++ KC + Y +K + GV I +++ L+E
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 58 MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA---KILRVLSYY 110
+ +P I EN V I E L + + + T +IL + Y
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 111 HSNRCLHGRLNPYQALI---NLSDYTVK-----IARLISVGCIFA-----------EMVI 151
HS R H L P ++ N+ + +K IA I G F E+V
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 205
Query: 152 QEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAIL 204
EPL +A + + L+ GE +ETL ++ Y ++E
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN---YDFDEE-------Y 255
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYRDV 242
+ D ++++L +PK R+ + +L H + + +
Sbjct: 256 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 59/276 (21%), Positives = 103/276 (37%), Gaps = 47/276 (17%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPD---GVPIS-ILTKISPLKE 57
+ Y E +G G++ KC + Y +K + GV I +++ L+E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 58 MDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPKTA---KILRVLSYY 110
+ +P I EN V I E L + + + T +IL + Y
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 111 HSNRCLHGRLNPYQALI---NLSDYTVK-----IARLISVGCIFA-----------EMVI 151
HS R H L P ++ N+ + +K IA I G F E+V
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 191
Query: 152 QEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEESEPKDLAIL 204
EPL +A + + L+ GE +ETL ++ Y ++E
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVN---YDFDEE-------Y 241
Query: 205 LPDLEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
+ D ++++L +PK R+ + +L H + +
Sbjct: 242 FSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 191 YCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVNDALNHHYY 239
Y E +P +L LE + DL+++ML +P +RIT+ +AL H ++
Sbjct: 297 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 191 YCYEESEPKDLAILLPDLEPAGV-DLLQKMLRVNPKERITVNDALNHHYY 239
Y E +P +L LE + DL+++ML +P +RIT+ +AL H ++
Sbjct: 288 YVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDAL 234
P L+ ML VNPK+RIT + AL
Sbjct: 236 PEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDAL 234
P L+ ML VNPK+RIT + AL
Sbjct: 235 PEAKSLIDSMLTVNPKKRITADQAL 259
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDAL 234
P L+ ML VNPK+RIT + AL
Sbjct: 236 PEAKSLIDSMLTVNPKKRITADQAL 260
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 210 PAGVDLLQKMLRVNPKERITVNDAL 234
P L+ ML VNPK+RIT + AL
Sbjct: 259 PEAKSLIDSMLTVNPKKRITADQAL 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 10/26 (38%), Positives = 19/26 (73%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYY 239
DL+ ++L+V+P+ R+T AL H ++
Sbjct: 338 DLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLK 36
EKY E +GRG++G ++C E ++ Y +K
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK 39
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 6 KVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYPLIFR 65
K E++G G++G +KCEE ++K + D + +IS + ++D+ + +
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK--NEISVMNQLDHANLIQ 150
Query: 66 KENDKLVYQIFE 77
+Y FE
Sbjct: 151 ------LYDAFE 156
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHY 238
DL+ KML V+P +R+T L H +
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
L P L+++ML VNP RI++++ + +++
Sbjct: 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
L P L+++ML VNP RI++++ + +++
Sbjct: 236 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
L P L+++ML VNP RI++++ + +++
Sbjct: 226 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 21/33 (63%)
Query: 208 LEPAGVDLLQKMLRVNPKERITVNDALNHHYYR 240
L P L+++ML VNP RI++++ + +++
Sbjct: 230 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHY 238
DL+ KML V+P +R+T L H +
Sbjct: 261 DLVSKMLHVDPHQRLTAKQVLQHPW 285
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 30/150 (20%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDG-----------VPISILT 50
E Y KV +G G YG C+E + ++K G I
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 51 KISPLKEMDYPLIFRK----ENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK------- 99
+IS LK +D+P I + E+ K Y + E+ L F IIN K
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL------FEQIINRHKFDECDAA 149
Query: 100 --TAKILRVLSYYHSNRCLHGRLNPYQALI 127
+IL + Y H + +H + P L+
Sbjct: 150 NIMKQILSGICYLHKHNIVHRDIKPENILL 179
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 44/166 (26%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQAL---------INLSDYTVKIAR---LISVGC----- 144
++L + Y H N +H L P L I ++D+ + ++S C
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGY 173
Query: 145 IFAEMVIQEPLSEDAS-ESRERISIFRLMGEPSEETLPGVTTFFPFIYCYEESEPKDL-- 201
+ E++ Q+P S+ S I+ L G P PF YEE+E K
Sbjct: 174 VAPEVLAQKPYSKAVDCWSIGVITYILLCGYP------------PF---YEETESKLFEK 218
Query: 202 ---------AILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
+ D+ + D + +L +P ER T AL+H +
Sbjct: 219 IKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLL-KADIIPDGVPISILTKISPLKEMDY 60
E Y V++IGRG +G Y LL K ++I + + +
Sbjct: 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHSN 113
P L + ++D+ +Y + EY +L ++ N+ D+ TA+++ L HS
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM 187
Query: 114 RCLHGRLNPYQALINLSDY 132
+H + P L++ S +
Sbjct: 188 GFIHRDVKPDNMLLDKSGH 206
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLL-KADIIPDGVPISILTKISPLKEMDY 60
E Y V++IGRG +G Y LL K ++I + + +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHSN 113
P L + ++D+ +Y + EY +L ++ N+ D+ TA+++ L HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM 192
Query: 114 RCLHGRLNPYQALINLSDY 132
+H + P L++ S +
Sbjct: 193 GFIHRDVKPDNMLLDKSGH 211
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 9/139 (6%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLL-KADIIPDGVPISILTKISPLKEMDY 60
E Y V++IGRG +G Y LL K ++I + + +
Sbjct: 74 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 61 P----LIFRKENDKLVYQIFEYTGLLNLRKVIKNFLDIINNPK---TAKILRVLSYYHSN 113
P L + ++D+ +Y + EY +L ++ N+ D+ TA+++ L HS
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNY-DVPEKWARFYTAEVVLALDAIHSM 192
Query: 114 RCLHGRLNPYQALINLSDY 132
+H + P L++ S +
Sbjct: 193 GFIHRDVKPDNMLLDKSGH 211
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35
A Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35
A Resolution
Length = 336
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MEKYRKVELIGRGKYGSFYKCEED 24
++ + +ELIGRG+YG+ YK D
Sbjct: 12 LDNLKLLELIGRGRYGAVYKGSLD 35
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 28.1 bits (61), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 212 GVDLLQKMLRVNPKERITVNDALNHHY 238
G D ++K+L +P R+T++ AL H +
Sbjct: 387 GKDFIRKLLLADPNTRMTIHQALEHPW 413
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
+KY + E IG+G G+ Y DVA + + + ++ I+ +I ++E P
Sbjct: 21 KKYTRFEKIGQGASGTVYTA-MDVA-TGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 62 LIFRKENDKLV----YQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSN 113
I + LV + + EY +L V+ ++ + A + L+ L + HSN
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 114 RCLHGRLNPYQALINLSDYTVKIA 137
+ +H + L+ + D +VK+
Sbjct: 137 QVIHRNIKSDNILLGM-DGSVKLT 159
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
DL++ ML P +R+T+ +AL H ++ + + P
Sbjct: 326 DLIESMLEYEPAKRLTLGEALQHPFFARLRAEP 358
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 28.1 bits (61), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 39 IIPDGVPISILTKISPLKEMDYPLIFR------KENDKLVYQIFEYTGLLNLRKV--IKN 90
I P G + +I+ LK++D+P + + N+ +Y +FE + +V +K
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP 133
Query: 91 FLDIINNPKTAKILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARL-ISVGCIFAEM 149
+ +++ + Y H + +H + P L+ D +KIA +S ++
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG-EDGHIKIADFGVSNEFKGSDA 192
Query: 150 VIQEPLSEDASESRERISIFR--LMGEPSEETLPGVTTF-FPFIYC--------YEESEP 198
++ + A + E +S R G+ + GVT + F F C S+
Sbjct: 193 LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKI 252
Query: 199 KDLAILLPDLEPAG---VDLLQKMLRVNPKERITVNDALNHHY 238
K A+ PD DL+ +ML NP+ RI V + H +
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPW 295
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 271 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 302
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 212 GVDLLQKMLRVNPKERITVNDALNHHY 238
G D ++K+L +P R+T++ AL H +
Sbjct: 281 GKDFIRKLLLADPNTRMTIHQALEHPW 307
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ +P ER+T+ +NH + + VP
Sbjct: 267 LIRLLLKTDPTERLTITQFMNHPWINQSMVVP 298
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 263 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 294
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 256 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 287
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 236 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 267
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 262 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 293
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 261 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 292
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 301 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 332
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 255 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 286
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 27.7 bits (60), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 307 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 338
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/32 (31%), Positives = 20/32 (62%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ +P ER+T+ +NH + + VP
Sbjct: 248 LIRLLLKTDPTERLTITQFMNHPWINQSMVVP 279
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 27.7 bits (60), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 215 LLQKMLRVNPKERITVNDALNHHYYRDVVSVP 246
L++ +L+ P +R+T+ + +NH + VP
Sbjct: 257 LIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP 288
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYYRDVV 243
DL+ + L V P++R T +AL H +++ V
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 214 DLLQKMLRVNPKERITVNDALNH 236
DL+ ++LR NP +R++++ L+H
Sbjct: 241 DLIHQLLRRNPADRLSLSSVLDH 263
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 214 DLLQKMLRVNPKERITVNDALNHHYYRDVV 243
DL+ + L V P++R T +AL H +++ V
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
+KY + E IG+G G+ Y DVA + + + ++ I+ +I ++E P
Sbjct: 20 KKYTRFEKIGQGASGTVYTA-MDVA-TGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 62 LIFRKENDKLV----YQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSN 113
I + LV + + EY +L V+ ++ + A + L+ L + HSN
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 114 RCLHGRLNPYQALINLSDYTVKIA 137
+ +H + L+ + D +VK+
Sbjct: 136 QVIHRDIKSDNILLGM-DGSVKLT 158
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
+KY + E IG+G G+ Y DVA + + + ++ I+ +I ++E P
Sbjct: 20 KKYTRFEKIGQGASGTVYTA-MDVA-TGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 62 LIFRKENDKLV----YQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSN 113
I + LV + + EY +L V+ ++ + A + L+ L + HSN
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 114 RCLHGRLNPYQALINLSDYTVKIA 137
+ +H + L+ + D +VK+
Sbjct: 136 QVIHRDIKSDNILLGM-DGSVKLT 158
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
+KY + E IG+G G+ Y DVA + + + ++ I+ +I ++E P
Sbjct: 21 KKYTRFEKIGQGASGTVYTA-MDVA-TGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 78
Query: 62 LIFRKENDKLV----YQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSN 113
I + LV + + EY +L V+ ++ + A + L+ L + HSN
Sbjct: 79 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN 136
Query: 114 RCLHGRLNPYQALINLSDYTVKIA 137
+ +H + L+ + D +VK+
Sbjct: 137 QVIHRDIKSDNILLGM-DGSVKLT 159
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 2 EKYRKVELIGRGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKISPLKEMDYP 61
+KY + E IG+G G+ Y DVA + + + ++ I+ +I ++E P
Sbjct: 20 KKYTRFEKIGQGASGTVYTA-MDVA-TGQEVAIRQMNLQQQPKKELIINEILVMRENKNP 77
Query: 62 LIFRKENDKLV----YQIFEYTGLLNLRKVIKNFLDIINNPKTAKI----LRVLSYYHSN 113
I + LV + + EY +L V+ ++ + A + L+ L + HSN
Sbjct: 78 NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSN 135
Query: 114 RCLHGRLNPYQALINLSDYTVKIA 137
+ +H + L+ + D +VK+
Sbjct: 136 QVIHRDIKSDNILLGM-DGSVKLT 158
>pdb|4G84|A Chain A, Crystal Structure Of Human Hisrs
pdb|4G84|B Chain B, Crystal Structure Of Human Hisrs
Length = 464
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 8/50 (16%)
Query: 12 RGKYGSFYKCEEDVAENAYQTVLLKADIIPDGVPISILTKI-SPLKEMDY 60
RG+Y FY+C+ D+A N +IPD + I+ +I S L+ D+
Sbjct: 123 RGRYREFYQCDFDIAGNF-------DPMIPDAECLKIMCEILSSLQIGDF 165
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 42/166 (25%)
Query: 102 KILRVLSYYHSNRCLHGRLNPYQALINLSDYTVKIARLISVGC------------IFA-- 147
+IL ++Y H+ + H L P ++ + + +LI G IF
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 148 -----EMVIQEPLSEDASESRERISIFRLM-------GEPSEETLPGVTTFFPFIYCYEE 195
E+V EPL +A + + L+ G+ +ETL +T Y ++E
Sbjct: 183 EFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV---SYDFDE 239
Query: 196 ---SEPKDLAILLPDLEPAGVDLLQKMLRVNPKERITVNDALNHHY 238
S+ +LA D ++K+L ++R+T+ +AL H +
Sbjct: 240 EFFSQTSELA----------KDFIRKLLVKETRKRLTIQEALRHPW 275
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,436,580
Number of Sequences: 62578
Number of extensions: 297621
Number of successful extensions: 2037
Number of sequences better than 100.0: 473
Number of HSP's better than 100.0 without gapping: 341
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 806
length of query: 246
length of database: 14,973,337
effective HSP length: 96
effective length of query: 150
effective length of database: 8,965,849
effective search space: 1344877350
effective search space used: 1344877350
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)