BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036363
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81025|P2A03_ARATH Putative protein PHLOEM PROTEIN 2-LIKE A3 OS=Arabidopsis thaliana
GN=PP2A3 PE=4 SV=1
Length = 463
Score = 182 bits (463), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/185 (48%), Positives = 123/185 (66%), Gaps = 13/185 (7%)
Query: 16 SNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVID 75
S ++ +VLVG TGNGKS+TGN++LG + FKS+ + GVT CEM+R ++DG ++NVID
Sbjct: 2 SEPIKNIVLVGRTGNGKSSTGNTLLGTKQFKSKNQAKGVTMICEMYRAAIQDGPIINVID 61
Query: 76 TPGLFD-FSAGSEFDE------------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKN 122
TPGL D F G + IHA L+V S R R S+EEE+T+++LQ +FG
Sbjct: 62 TPGLCDSFVPGDDISNEIINCLTMAEEGIHAVLLVLSARGRISKEEESTVNTLQCIFGSQ 121
Query: 123 CFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTE 182
DY IVVF+G D+LE +D+TL+DY CP+ L ++L L R VLFDNK+KD K+ E
Sbjct: 122 ILDYCIVVFTGGDDLEEDDQTLDDYFRAGCPEFLTKVLRLCGGRKVLFDNKSKDEKKKVE 181
Query: 183 QIGKL 187
Q+ +L
Sbjct: 182 QVKQL 186
>sp|P54120|AIG1_ARATH Protein AIG1 OS=Arabidopsis thaliana GN=AIG1 PE=2 SV=1
Length = 353
Score = 176 bits (447), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/236 (46%), Positives = 140/236 (59%), Gaps = 24/236 (10%)
Query: 13 TSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVN 72
S + V +VLVG TGNGKSATGNSI+ + FKS+ SSGVT C + V +G ++N
Sbjct: 36 ASQPHPVENIVLVGRTGNGKSATGNSIVRSKVFKSKTKSSGVTMECHAVKAVTPEGPILN 95
Query: 73 VIDTPGLFDFSAGSEF--DEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLF 119
VIDTPGLFD S +EF EI HA L+V SVR+R SQEEE L +LQ LF
Sbjct: 96 VIDTPGLFDLSVSAEFIGKEIVKCLTLADGGLHAVLLVLSVRTRISQEEEMVLSTLQVLF 155
Query: 120 GKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAK 179
G DY+IVVF+G D LE + TLEDYLG P LK +L L R +LFDNKTKD K
Sbjct: 156 GSKIVDYLIVVFTGGDVLEDDGMTLEDYLGDNMPDFLKRVLILCGQRMILFDNKTKDDEK 215
Query: 180 RTEQIGKLRSL-QLAREHAARLKVEVTAKSTQMKSDDKIHKLREDLERAQRENEGL 234
+T+Q+ +L L L R+ + +D+ H ++E+ ER ++E E L
Sbjct: 216 KTKQVHELLKLIDLVRKQNNNIPY----------TDEMYHMIKEENERHKKEQEEL 261
>sp|Q9NUV9|GIMA4_HUMAN GTPase IMAP family member 4 OS=Homo sapiens GN=GIMAP4 PE=1 SV=1
Length = 329
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 21/187 (11%)
Query: 15 PSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVI 74
P N +VLVG TG GKSATGNSILGR+ F S ++ +T CE + K+ ++V V+
Sbjct: 26 PRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCEKRSSSWKETELV-VV 84
Query: 75 DTPGLFD--FSAGSEFDEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLFGK 121
DTPG+FD EI HA L+V + R+++EE + +FG+
Sbjct: 85 DTPGIFDTEVPNAETSKEIIRCILLTSPGPHALLLVVPL-GRYTEEEHKATEKILKMFGE 143
Query: 122 NCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDA---A 178
+MI++F+ +D+L D L DYL RE P+ +++++ +F +R +NK A A
Sbjct: 144 RARSFMILIFTRKDDL--GDTNLHDYL-REAPEDIQDLMDIFGDRYCALNNKATGAEQEA 200
Query: 179 KRTEQIG 185
+R + +G
Sbjct: 201 QRAQLLG 207
>sp|Q99JY3|GIMA4_MOUSE GTPase IMAP family member 4 OS=Mus musculus GN=Gimap4 PE=1 SV=1
Length = 219
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
+VL+G TG GKS+TGNSILG + F S + +T CE R DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGEKVFNSGICAKSITKVCE-KRVSTWDGKELVVVDTPGIFD 91
Query: 82 FSA--GSEFDEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
EI HA L+V + R++ EE + +FGK +MI
Sbjct: 92 TEVPDADTQREITRYVALTSPGPHALLLVVPL-GRYTVEEHKATQKILDMFGKQARRFMI 150
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLR 188
++ + +D+LE D + +YL + PK +E++H F NR LF+N+ A K +++ L
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-EKAPKFFQEVMHEFQNRYCLFNNRASGAEKEEQKMQLLT 207
Query: 189 SLQ 191
+Q
Sbjct: 208 LVQ 210
>sp|Q8K3K9|GIMA4_RAT GTPase IMAP family member 4 OS=Rattus norvegicus GN=Gimap4 PE=2
SV=1
Length = 310
Score = 97.1 bits (240), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 107/193 (55%), Gaps = 21/193 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
+VL+G TG GKS+TGNSILGR+AF S + +T CE ++ DG+ + V+DTPG+FD
Sbjct: 33 IVLLGKTGAGKSSTGNSILGRKAFLSGICAKSITKVCEKGVSIW-DGKELVVVDTPGIFD 91
Query: 82 FSA--GSEFDEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
EI HA L+V + +E +AT L ++F K +MI
Sbjct: 92 TEVPDADTQKEITRCVALTSPGPHALLLVIPLGCYTVEEHKAT-RKLLSMFEKKARRFMI 150
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLR 188
++ + +D+LE D + +YL P+ L+E+++ F NR LF+NK A++ EQ +L
Sbjct: 151 LLLTRKDDLEDTD--IHEYL-ETAPEVLQELIYEFRNRYCLFNNKA-SGAEQEEQKRQLL 206
Query: 189 SL--QLAREHAAR 199
+L + RE+ +
Sbjct: 207 TLVQSMVRENGGK 219
>sp|Q8NHV1|GIMA7_HUMAN GTPase IMAP family member 7 OS=Homo sapiens GN=GIMAP7 PE=2 SV=1
Length = 300
Score = 94.0 bits (232), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 102/182 (56%), Gaps = 17/182 (9%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
+VLVG TG+GKSAT N+ILG F SR ++ VT C+ + G+ + V+DTPGLFD
Sbjct: 11 IVLVGKTGSGKSATANTILGEEIFDSRIAAQAVTKNCQKASREWQ-GRDLLVVDTPGLFD 69
Query: 82 F--SAGSEFDEIHA----------ALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIV 129
S + EI A+V+ + R+++EE+ T+ ++ +FGK+ +M++
Sbjct: 70 TKESLDTTCKEISRCIISSCPGPHAIVLVLLLGRYTEEEQKTVALIKAVFGKSAMKHMVI 129
Query: 130 VFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDA-AKRTEQIGKLR 188
+F+ ++ELE ++ D++ + LK I+ NRC F N K + A++ Q+ +L
Sbjct: 130 LFTRKEELEG--QSFHDFIA-DADVGLKSIVKECGNRCCAFSNSKKTSKAEKESQVQELV 186
Query: 189 SL 190
L
Sbjct: 187 EL 188
>sp|Q75N62|GIMA8_MOUSE GTPase IMAP family member 8 OS=Mus musculus GN=Gimap8 PE=2 SV=1
Length = 688
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 96/183 (52%), Gaps = 20/183 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++L+G +G GKSATGN+ILGR AF S+ + VTS+ + + L D Q V V+DTP
Sbjct: 478 IILLGRSGAGKSATGNTILGRSAFFSQLRAQPVTSSSQSGKRTL-DWQDVVVVDTPSFIQ 536
Query: 82 FSAGSEFD------EIHAAL----------VVFSVRSRFSQEEEATLHSLQTLFGKNCFD 125
+ G+E D EIH L V+ RF+QE+E + L+ F +N
Sbjct: 537 -TPGTEKDPSRLKEEIHHCLSLCEEGMKIFVLVLQLGRFTQEDEVVVEQLEASFEENIMK 595
Query: 126 YMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIG 185
YMIV+F+ +++L D L DY K LK+IL + R F+NK + T+ G
Sbjct: 596 YMIVLFTRKEDL--GDGDLHDYTNNTKNKALKKILKKCNGRVCAFNNKETGEDQETQVKG 653
Query: 186 KLR 188
L+
Sbjct: 654 LLK 656
Score = 87.0 bits (214), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 98/179 (54%), Gaps = 19/179 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++L+G G GKSATGN+ILG+ F+S+ S VT C+ ++ QV+ VIDTP LF
Sbjct: 51 LLLLGKQGAGKSATGNTILGKAVFESKFSDHMVTDRCQSESVSVRGKQVI-VIDTPDLFS 109
Query: 82 FSAGSE------------FDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIV 129
+ SE + H L++ + +++E+ T+ + G + +MIV
Sbjct: 110 SLSCSEVRQQNLKQCLELLADDHCVLLLVTPIGHYTEEDRETIEGIWGKIGPKAYRHMIV 169
Query: 130 VFSGRDELEANDETLEDYLGRECPKPLKEIL-HLFDNRCVLFDNKTKDAAKRTEQIGKL 187
VF+ DEL ++++L +Y+ E + LKE++ ++ RC F+NK D +R Q+ KL
Sbjct: 170 VFTREDEL--DEDSLWNYI--ESKESLKELIKNIGSRRCCTFNNKA-DKKQRELQVFKL 223
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 17/188 (9%)
Query: 9 DCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSG-VTSTCEMHRTVLKD 67
DC+ P V+L+G G GKSA GNSILG++ FK++ S VT H V +
Sbjct: 277 DCDPDMPE---LRVLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTKAFASHSRVWQ- 332
Query: 68 GQVVNVIDTPGL----FDFSA--GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGK 121
G+ V +ID+P + D SA F HA L+V + S +++ ++ +FG+
Sbjct: 333 GKKVLIIDSPEISSWKLDESAVKNHTFPGPHAFLLVTPLGSSLKSDDDV-FSIIKRIFGE 391
Query: 122 NCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRT 181
+ IV+F+ +++ E D+ L+ + L + F R +F N +
Sbjct: 392 KFTKFTIVLFTRKEDFE--DQALDKVIKEN--DALYNLTQKFGERYAIF-NYRASVEEEQ 446
Query: 182 EQIGKLRS 189
Q+GKL S
Sbjct: 447 SQVGKLLS 454
>sp|Q8ND71|GIMA8_HUMAN GTPase IMAP family member 8 OS=Homo sapiens GN=GIMAP8 PE=1 SV=2
Length = 665
Score = 85.9 bits (211), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 104/179 (58%), Gaps = 19/179 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++L+G +GKSATGN+ILG+ FKS+ S V C+ VL++ +VV VIDTP LF
Sbjct: 13 LLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVV-VIDTPDLFS 71
Query: 82 FSAGSEFDE-------------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
A +E + +HA L+V ++ F++E+E T +Q +FG ++I
Sbjct: 72 SIACAEDKQRNIQHCLELSAPSLHALLLVIAI-GHFTREDEETAKGIQQVFGAEARRHII 130
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKL 187
+VF+ +D + D+ L+D++ E KPLK+++ ++ R +F+NKT ++ Q+ +L
Sbjct: 131 IVFTRKD--DLGDDLLQDFI--EKNKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVLEL 185
Score = 82.0 bits (201), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 22/178 (12%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
+VLVG +G GKSATGNSILG F SR + VT T + R DGQ V V+DTP F+
Sbjct: 441 IVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTW-DGQEVVVVDTPS-FN 498
Query: 82 FSAGSEFD------EIHAAL-----------VVFSVRSRFSQEEEATLHSLQTLFGKNCF 124
E D E+ L +VF + RF++E++ + L+ +FG +
Sbjct: 499 QMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQL-GRFTEEDKTAVAKLEAIFGADFT 557
Query: 125 DYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTE 182
Y I++F+ +++L A + LED++ K L+ I R F+NK A+ T+
Sbjct: 558 KYAIMLFTRKEDLGAGN--LEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQAQETQ 613
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 89/168 (52%), Gaps = 19/168 (11%)
Query: 14 SPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVT-STCEMHRTVLKDGQVVN 72
+P TV+LVG G GKSA GNSILGR+AF++ S VT S R+ K + V+
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVTQSFLSESRSWRK--KKVS 299
Query: 73 VIDTPGLFDFSAGSEFDE---------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNC 123
+ID P D S+ D HA L+V + +++ +EA L ++Q FG+
Sbjct: 300 IIDAP---DISSLKNIDSEVRKHICTGPHAFLLVTPL-GFYTKNDEAVLSTIQNNFGEKF 355
Query: 124 FDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFD 171
F+YMI++ + +++L D+ L+ +L R K L ++ NR F+
Sbjct: 356 FEYMIILLTRKEDL--GDQDLDTFL-RNSNKALYGLIQKCKNRYSAFN 400
>sp|Q96F15|GIMA5_HUMAN GTPase IMAP family member 5 OS=Homo sapiens GN=GIMAP5 PE=1 SV=1
Length = 307
Score = 85.1 bits (209), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 110/209 (52%), Gaps = 21/209 (10%)
Query: 1 MGGSRIDDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEM 60
M R +D+ T P+ ++LVG TG GKSATGNSILG+ F+S+ + VT TC++
Sbjct: 12 MAEGRSEDNLSATPPA---LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV 68
Query: 61 HRTVLKDGQVVNVIDTPGLFDFSAGSE--FDEI-----------HAALVVFSVRSRFSQE 107
+T +G+ V V+DTP +F+ A ++ + I H L+V + RF+ +
Sbjct: 69 -KTGTWNGRKVLVVDTPSIFESQADTQELYKNIGDCYLLSAPGPHVLLLVIQL-GRFTAQ 126
Query: 108 EEATLHSLQTLFGKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRC 167
+ + ++ +FG +++++F+ +++L + L+DY+ LK+++ + R
Sbjct: 127 DTVAIRKVKEVFGTGAMRHVVILFTHKEDL--GGQALDDYVANTDNCSLKDLVRECERRY 184
Query: 168 VLFDNKTKDAAKRTEQIGKLRSLQ-LARE 195
F+N +R +Q L ++ L RE
Sbjct: 185 CAFNNWGSVEEQRQQQAELLAVIERLGRE 213
>sp|Q8K349|GIMA6_MOUSE GTPase IMAP family member 6 OS=Mus musculus GN=Gimap6 PE=2 SV=1
Length = 305
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 98/180 (54%), Gaps = 19/180 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++LVG TG+GKSATGNSILGR+AF+S+ S+ VT+T + T +G+ + VIDTP +F
Sbjct: 106 LLLVGKTGSGKSATGNSILGRQAFESKISARPVTTTFQ-KGTREFEGKELEVIDTPDIFS 164
Query: 82 FSAGSEFDE-----------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVV 130
E HA L+V V R++ E++A LQ +FG Y I+V
Sbjct: 165 PQNQPEATAKKICDLLASPGPHAVLLVIQV-GRYTAEDQAVARCLQEIFGNTILAYTILV 223
Query: 131 FSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLRSL 190
F+ +++L + +LE+Y+ K L + + R F+NK A+ EQ +L+ L
Sbjct: 224 FTRKEDLA--EGSLEEYIQENNNKSLDVLDVACERRHCGFNNK----AQGDEQEAQLKKL 277
>sp|Q4KLG2|GIMA8_RAT GTPase IMAP family member 8 OS=Rattus norvegicus GN=Gimap8 PE=2
SV=1
Length = 688
Score = 85.1 bits (209), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 95/172 (55%), Gaps = 19/172 (11%)
Query: 16 SNGVRTV--VLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNV 73
S G T+ +L+G G GKSATGN+ILG+ F+SR S VT C+ ++ QV+ V
Sbjct: 43 SQGTSTLRLLLLGKQGAGKSATGNTILGKAVFESRFSHHMVTKRCQSESVSVRGKQVI-V 101
Query: 74 IDTPGLFDFSAGSEFDEIH-----------AALVVFSVRSRFSQEEEATLHSLQTLFGKN 122
IDTP LF E + + L++ + ++E++ T+ +Q +FG
Sbjct: 102 IDTPDLFSSLGCPEVQQQNLRQCLDLLADPYVLLLVTPIGHSTEEDKKTIEGIQGVFGPQ 161
Query: 123 CFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEIL-HLFDNRCVLFDNK 173
+ +MIVVF+ DEL ++TL++++ E K LK+++ ++ RC F+NK
Sbjct: 162 AYRHMIVVFTREDEL--GEDTLQNHI--ESKKYLKKLIENIGSQRCCAFNNK 209
Score = 84.7 bits (208), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++L+G +G GKSATGN+ILGR AF S+ + VTS + R L D Q + V+DTP L
Sbjct: 477 IILLGRSGVGKSATGNTILGRPAFVSQLRAQPVTSRSQSGRRTL-DWQDIVVVDTPSLNQ 535
Query: 82 FSAGSEFD------EIHAAL------------VVFSVRSRFSQEEEATLHSLQTLFGKNC 123
S G+E + EI L +VF + RF+QE+EA + L+ F +N
Sbjct: 536 MS-GTEKNPAQLKKEIKQCLLQNCEEGMKVFVLVFQL-GRFTQEDEAVVEQLEASFEENI 593
Query: 124 FDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNK 173
YMIV+F+ +++L D L D+ K LK I R F+NK
Sbjct: 594 MKYMIVLFTRKEDL--GDGDLYDFTNNTKNKVLKRIFKKCKGRVCAFNNK 641
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 12/174 (6%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
V+L+G G GKSA GNSILG++ FK++ S + + L + + +ID+P +
Sbjct: 286 VLLMGKRGVGKSAAGNSILGKQVFKTQFSEKQRVTEAFASHSRLWNQKKFLIIDSPEISS 345
Query: 82 FSAGSE------FDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVVFSGRD 135
+ F HA L+V + S + ++ ++ +FG+ + I++F+ ++
Sbjct: 346 WKLDESDVKEHTFPGPHAFLLVTPLGSSL-KSGDSVFSIIKRIFGEKFIKFTIILFTRKE 404
Query: 136 ELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLRS 189
+ E D D +E L ++ +F+ R +F N + Q+GKL S
Sbjct: 405 DFEGQD---LDTFTKE-NDALCNLIQIFEGRYAVF-NYRATVEEEQSQVGKLLS 453
>sp|Q8WWP7|GIMA1_HUMAN GTPase IMAP family member 1 OS=Homo sapiens GN=GIMAP1 PE=1 SV=1
Length = 306
Score = 84.3 bits (207), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 28/197 (14%)
Query: 1 MGGSRIDDDCE--------LTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSS 52
MGG ++ D E S R ++LVG TG GKSATGNSILG+R F SR ++
Sbjct: 1 MGGRKMATDEENVYGLEENAQSRQESTRRLILVGRTGAGKSATGNSILGQRRFFSRLGAT 60
Query: 53 GVTSTCEMHRTVLKDGQVVNVIDTPGLFDFSAGSEFDE---------------IHAALVV 97
VT C + D V V+DTP +F S S+ D HA L+V
Sbjct: 61 SVTRACTTG-SRRWDKCHVEVVDTPDIFS-SQVSKTDPGCEERGHCYLLSAPGPHALLLV 118
Query: 98 FSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLK 157
+ RF+ +++ + ++ +FG++ +M++VF+ +++L +L DY+ + L+
Sbjct: 119 TQL-GRFTAQDQQAVRQVRDMFGEDVLKWMVIVFTRKEDLAGG--SLHDYVSNTENRALR 175
Query: 158 EILHLFDNRCVLFDNKT 174
E++ R FDN+
Sbjct: 176 ELVAECGGRVCAFDNRA 192
>sp|Q6P9H5|GIMA6_HUMAN GTPase IMAP family member 6 OS=Homo sapiens GN=GIMAP6 PE=2 SV=1
Length = 292
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/181 (33%), Positives = 94/181 (51%), Gaps = 20/181 (11%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++L+G TG+GKSATGNSILGR F+S+ S+ VT T + R+ G+ + VIDTP +
Sbjct: 43 LILMGKTGSGKSATGNSILGRDVFESKLSTRPVTKTSQ-RRSREWAGKELEVIDTPNILS 101
Query: 82 FSAGSEF-DEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIV 129
E D I HA L+V + RF+ E++ + LQ +FG + I+
Sbjct: 102 PQVSPEVADAICQAIVLSAPGPHAVLLVTQL-GRFTDEDQQVVRRLQEVFGVGVLGHTIL 160
Query: 130 VFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLRS 189
VF+ +++L +LEDY+ + L + R F+N+ A+ EQ +LR
Sbjct: 161 VFTRKEDLAGG--SLEDYVRETNNQALAWLDVTLARRHCGFNNR----AQGEEQEAQLRE 214
Query: 190 L 190
L
Sbjct: 215 L 215
>sp|Q5FVN6|GIMA6_RAT GTPase IMAP family member 6 OS=Rattus norvegicus GN=Gimap6 PE=2
SV=1
Length = 304
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 19/180 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++LVG TG+GKSATGNSILGR+ F+S+ S+ VT + L +G+ + VIDTP +
Sbjct: 105 LLLVGKTGSGKSATGNSILGRQVFESKISARPVTMAFQKGSREL-EGKELEVIDTPDILS 163
Query: 82 FSAGSEFDE-----------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVV 130
E HA L+V V R++ E++ LQ +FG Y I+V
Sbjct: 164 PQNQPEATAKKICDILASPGPHAVLLVIQV-GRYTTEDQEAARCLQEIFGNGILAYTILV 222
Query: 131 FSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLRSL 190
F+ ++EL + +LE+Y+ K L + + R F+N+ A+ EQ +L+ L
Sbjct: 223 FTRKEELA--EGSLEEYIKENNNKTLDALDVACERRHCGFNNR----AQGDEQEAQLQKL 276
>sp|P70224|GIMA1_MOUSE GTPase IMAP family member 1 OS=Mus musculus GN=Gimap1 PE=1 SV=3
Length = 277
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 113/238 (47%), Gaps = 34/238 (14%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++LVG TG GKSATGNSILG++ F SR + VT +C + + Q V V+DTP +F
Sbjct: 6 LILVGRTGTGKSATGNSILGQKCFLSRLGAVPVTRSCTLASRMWAGWQ-VEVVDTPDIFS 64
Query: 82 FSAGSEFDEI------------------HAALVVFSVRSRFSQEEEATLHSLQTLFGKNC 123
SE HA L+V + RF+ ++ L +++ LFGK
Sbjct: 65 ----SEIPRTDPGCVETARCFVLSAPGPHALLLVTQL-GRFTMQDSQALAAVKRLFGKQV 119
Query: 124 FDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQ 183
+VVF+ +++L ++L+DY+ + L++++ R +N+ ++R Q
Sbjct: 120 MARTVVVFTRQEDLAG--DSLQDYVHCTDNRALRDLVAECGGRVCALNNRAT-GSEREAQ 176
Query: 184 IGKLRSLQ--LAREHA----ARLKVEVTAKSTQMKSDDKIHKLREDL-ERAQRENEGL 234
+L + L REH + E+ + D++ K+ E + ER QR L
Sbjct: 177 AEQLLGMVACLVREHGGAHYSNEVYELVQDTRCADPQDQVAKVAEIVAERMQRRTRLL 234
>sp|A5PKB7|GIMA6_BOVIN GTPase IMAP family member 6 OS=Bos taurus GN=GIMAP6 PE=2 SV=1
Length = 341
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 93/174 (53%), Gaps = 17/174 (9%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLF- 80
++LVG +G+GKSATGNSILGRR F+S+ S+ VT + +G+ + VIDTP +
Sbjct: 96 LILVGKSGSGKSATGNSILGRRVFESKLSARPVTQAFQQGCRAW-EGRELQVIDTPDILS 154
Query: 81 DFSAG------------SEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
++AG + +A L+V + RF++E++ L+ +FGK I
Sbjct: 155 PWAAGWATAQGVGEAGTGSLPKQYAVLLVTQL-GRFTEEDQQVAGRLEEVFGKGILARTI 213
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTE 182
+VF+ +++L+ +LE YL + L ++ + R F+NK A + T+
Sbjct: 214 LVFTRKEDLDGR--SLETYLRETDNRALAKLDDVCSRRHCGFNNKGDGAEQETQ 265
>sp|Q8K3L6|GIMA5_RAT GTPase IMAP family member 5 OS=Rattus norvegicus GN=Gimap5 PE=2
SV=1
Length = 326
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 120/245 (48%), Gaps = 37/245 (15%)
Query: 17 NGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDT 76
+G+ ++LVG +G GKSATGNSIL R AF+SR VT T + +G+ V+DT
Sbjct: 42 SGLLRILLVGKSGCGKSATGNSILRRPAFESRLRGQSVTRTSQAEMGTW-EGRSFLVVDT 100
Query: 77 PGLFDFSAGSE-FDE------------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNC 123
P +F+ ++ D+ H L+V + R++ E+ + ++ +FG
Sbjct: 101 PPIFESKIQNQDMDKDIGNCYLMCAPGPHVLLLVTQL-GRYTVEDAMAVRMVKQIFGVGV 159
Query: 124 FDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQ 183
YMIV+F+ +++L DE+LE+++ L ++ R F+NK A EQ
Sbjct: 160 MRYMIVLFTHKEDLA--DESLEEFVTHTGNLDLHRLVQECGRRYCAFNNK----ASGEEQ 213
Query: 184 IGKLRSL-----QLAREHAARL---------KVEVTAKSTQMKSDDKIH--KLREDLERA 227
G+L L +L +EH +V + ++ + K + K+R+++E+
Sbjct: 214 QGQLAELMALVRRLEQEHEGSFHSNDLFVYTQVFLRGGYSEHQEPYKFYLTKVRQEVEKQ 273
Query: 228 QRENE 232
+RE E
Sbjct: 274 KRELE 278
>sp|Q9UG22|GIMA2_HUMAN GTPase IMAP family member 2 OS=Homo sapiens GN=GIMAP2 PE=1 SV=2
Length = 337
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++LVG TG GKSA GNSIL ++AF+S+ S +T TC + + ++V +IDTP +F
Sbjct: 25 IILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIV-IIDTPDMFS 83
Query: 82 FSAGSE--FDEI-----------HAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
+ E + E+ H L+V + R++ +++ ++ +FG++ + I
Sbjct: 84 WKDHCEALYKEVQRCYLLSAPGPHVLLLVTQL-GRYTSQDQQAAQRVKEIFGEDAMGHTI 142
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKL 187
V+F+ +++L N +L DY+ K L +++ R F+N+ + + + +Q+ +L
Sbjct: 143 VLFTHKEDL--NGGSLMDYMHDSDNKALSKLVAACGGRICAFNNRA-EGSNQDDQVKEL 198
>sp|Q8BWF2|GIMA5_MOUSE GTPase IMAP family member 5 OS=Mus musculus GN=Gimap5 PE=2 SV=1
Length = 308
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 97/182 (53%), Gaps = 21/182 (11%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++LVG +G GKSATGNSIL R AF+SR VT T + T +G+ + V+DTP +F+
Sbjct: 29 ILLVGKSGCGKSATGNSILRRPAFQSRLRGQSVTRTSQAE-TGTWEGRSILVVDTPPIFE 87
Query: 82 FSAGSE-FDE------------IHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMI 128
A ++ D+ H L+V + RF+ E+ + ++ +FG +MI
Sbjct: 88 SKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDAMAVRMVKEVFGVGVMRHMI 146
Query: 129 VVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAKRTEQIGKLR 188
V+F+ +++LE +++LE+++ + L+ + R F+N+ A EQ G+L
Sbjct: 147 VLFTRKEDLE--EKSLEEFVTHTDNRSLRSLTQECGRRYCAFNNR----ASGEEQQGQLA 200
Query: 189 SL 190
L
Sbjct: 201 EL 202
>sp|Q99MI6|GIMA3_MOUSE GTPase IMAP family member 3 OS=Mus musculus GN=Gimap3 PE=1 SV=2
Length = 301
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 102/191 (53%), Gaps = 22/191 (11%)
Query: 13 TSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVN 72
TS S +R ++LVG +G GKSATGNS+L R AF+SR VT T + T +G+ +
Sbjct: 17 TSGSRPLR-ILLVGKSGCGKSATGNSLLRRPAFESRLRGQSVTRTSQAE-TGTWEGRSIL 74
Query: 73 VIDTPGLFDFSAGSE-FDE------------IHAALVVFSVRSRFSQEEEATLHSLQTLF 119
V+DTP +F+ A ++ D+ H L+V + RF+ E+ + ++ +F
Sbjct: 75 VVDTPPIFESKAQNQDMDKDIGDCYLLCAPGPHVLLLVTQL-GRFTAEDVMAVRMVKEVF 133
Query: 120 GKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFDNKTKDAAK 179
G +MIV+F+ +++L +++LE+++ + L+ ++ R F+N+ A
Sbjct: 134 GVGVMRHMIVLFTRKEDL--AEKSLEEFVTHTDNRSLRSLVQECGRRYCAFNNR----AS 187
Query: 180 RTEQIGKLRSL 190
EQ G+L L
Sbjct: 188 GEEQQGQLAEL 198
>sp|Q9LVT3|DRL38_ARATH Probable disease resistance protein At5g47260 OS=Arabidopsis
thaliana GN=At5g47260 PE=3 SV=2
Length = 948
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 12 LTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVV 71
LTS S+ ++T+ LVG TG+G++AT N+I G++ +S ++ VT C+ ++ D +
Sbjct: 874 LTSESHPIQTIDLVGTTGSGETATANNIQGKKVVQSGTHATVVTMECQTYKVFTPDCPIN 933
Query: 72 NVIDTPG 78
N+IDTPG
Sbjct: 934 NMIDTPG 940
>sp|E9PW74|GIMD1_MOUSE GTPase IMAP family member GIMD1 OS=Mus musculus GN=Gimd1 PE=3 SV=1
Length = 217
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 29/189 (15%)
Query: 12 LTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTS------TCEMHRTVL 65
+T + + + + G T +GKS+ GN +LG F S + VT +C +H +
Sbjct: 1 MTDTNKMIINLAVFGRTQSGKSSAGNVLLGSADFYSSFAPGSVTKECSLGRSCHLHGFMR 60
Query: 66 KDGQ----VVNVIDTPGLFDFSAGS--------------EFDE--IHAALVVFSV-RSRF 104
+ GQ + V+DTPG + S S F + +H AL+V F
Sbjct: 61 RGGQEISLQIQVLDTPG-YPHSKLSTRCVKQEVKKALLHHFGQEGLHLALLVQRADVPFF 119
Query: 105 SQEEEATLHSLQTLFGKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFD 164
QE + +Q L G +C +YM V+F+ +ELE + E+YL RE L +L
Sbjct: 120 GQEASNAVQLMQELLGDSCKNYMAVLFTHAEELEEAGLSEEEYL-REASDTLLTLLDSVQ 178
Query: 165 NRCVLFDNK 173
+R + +
Sbjct: 179 HRYIFLSGR 187
>sp|P0DJR0|GIMD1_HUMAN GTPase IMAP family member GIMD1 OS=Homo sapiens GN=GIMD1 PE=2 SV=1
Length = 217
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 84/199 (42%), Gaps = 27/199 (13%)
Query: 12 LTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTV------- 64
+T P+ + + L G T +GKS+ GN +LG F S + VT+ C + R+
Sbjct: 1 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 60
Query: 65 ---LKDGQVVNVIDTPGLFDFSAGSEFDE---------------IHAALVVFSVRSRF-S 105
L+ V V+DTPG ++ + +H AL+V F
Sbjct: 61 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCG 120
Query: 106 QEEEATLHSLQTLFGKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDN 165
QE + +Q L G +Y ++F+ +++E T + YL E LK +L+ +
Sbjct: 121 QEVTDPVQMIQELLGHAWMNYTAILFTHAEKIEEAGLTEDKYL-HEASDTLKTLLNSIQH 179
Query: 166 RCVLFDNKTKDAAKRTEQI 184
+ V K K ++ +I
Sbjct: 180 KYVFQYKKGKSLNEQRMKI 198
>sp|G3MZQ6|GIMD1_BOVIN GTPase IMAP family member GIMD1 OS=Bos taurus GN=GIMD1 PE=3 SV=1
Length = 216
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 77/174 (44%), Gaps = 27/174 (15%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRT------VLKDGQ----VV 71
+ L G T +GKS+ GN ILG F S + VT C + R+ + + GQ V
Sbjct: 10 LALFGMTQSGKSSAGNIILGSTDFHSSFAPCSVTRDCSLGRSCHFRSFMRRGGQEVTLQV 69
Query: 72 NVIDTPG-----LFDFSAGSEFDE----------IHAALVVFSVRSRF-SQEEEATLHSL 115
V+DTPG L E E +H AL+V QEE + + +
Sbjct: 70 QVLDTPGYPHSRLSKKHVRQEVREALAHHFGQEGLHLALLVQRADVPLCGQEESSPVQMI 129
Query: 116 QTLFGKNCFDYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVL 169
Q L G +Y ++F+ +++E ++YL RE + L ++L+ +R +
Sbjct: 130 QELLGHTWMNYTAILFTHAEKIEEAGFNEDEYL-REASETLLKLLNSIQHRYIF 182
>sp|B0BMZ3|GIMD1_RAT GTPase IMAP family member GIMD1 OS=Rattus norvegicus GN=Gimd1 PE=2
SV=1
Length = 216
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 69/158 (43%), Gaps = 30/158 (18%)
Query: 19 VRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQV-------- 70
+ + ++G T +GKS+ GN +LG F SR + VT C + R+ G +
Sbjct: 7 IINLAVLGKTQSGKSSAGNVLLGSADFYSRFAPGSVTKDCSLGRSCHIHGFMRRGGHEIS 66
Query: 71 --VNVIDTPGL-----------------FDFSAGSEFDEIHAALVVFSV-RSRFSQEEEA 110
+ V+DTPG + G E +H AL+V F QE
Sbjct: 67 LQIQVLDTPGYPHSKLSTRCVKQEVKKALEHHFGQE--GLHLALLVHRADMPFFGQEASD 124
Query: 111 TLHSLQTLFGKNCFDYMIVVFSGRDELEANDETLEDYL 148
++ +Q L G + +Y ++F+ ++++ + E+YL
Sbjct: 125 SVQLIQELLGDSWKNYTAILFTHAEKIKEAGLSEEEYL 162
>sp|Q1QS64|IF2_NITHX Translation initiation factor IF-2 OS=Nitrobacter hamburgensis
(strain X14 / DSM 10229) GN=infB PE=3 SV=1
Length = 868
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 15/146 (10%)
Query: 7 DDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLK 66
DDD + P + V TV+ GH +GK++ +++ R A + G+T ++
Sbjct: 357 DDDSTVVEPRSPVVTVM--GHVDHGKTSLLDAV--RHANVVSGEAGGITQHIGAYQVTSP 412
Query: 67 DGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKN 122
DG+ + IDTPG F+A G++ +I LVV + Q EA H+ K
Sbjct: 413 DGKKITFIDTPGHAAFTAMRARGAKVTDI-VVLVVAADDGVMPQTVEAINHA------KA 465
Query: 123 CFDYMIVVFSGRDELEANDETLEDYL 148
MI+ + D+ +A E + L
Sbjct: 466 AKVPMIIAINKIDKPDAKPERVRTEL 491
>sp|Q38906|TOC34_ARATH Translocase of chloroplast 34, chloroplastic OS=Arabidopsis
thaliana GN=TOC34 PE=1 SV=2
Length = 313
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 21 TVVLVGHTGNGKSATGNSILGRRAFK-SRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGL 79
TV+++G G GKS+T NS++G +A S S G+ T + RT + G +N+IDTPGL
Sbjct: 40 TVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTL-VSRT--RSGFTLNIIDTPGL 96
Query: 80 FD 81
+
Sbjct: 97 IE 98
>sp|Q6S5G3|TOC90_ARATH Translocase of chloroplast 90, chloroplastic OS=Arabidopsis
thaliana GN=TOC90 PE=1 SV=1
Length = 793
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLFD 81
++++G TG GKSAT NSI G+ ++ A G E+ TV G V IDTPG
Sbjct: 169 ILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV--SGVKVTFIDTPGFHP 226
Query: 82 FSAGS 86
S+ S
Sbjct: 227 LSSSS 231
>sp|A8MIS4|ENGB_ALKOO Probable GTP-binding protein EngB OS=Alkaliphilus oremlandii
(strain OhILAs) GN=engB PE=3 SV=1
Length = 208
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 30/138 (21%)
Query: 15 PSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVN-- 72
P NG+ + L G + GKS+T N+IL RR ++S G T T + +VN
Sbjct: 19 PENGLPEIALAGRSNVGKSSTVNTILKRRKLARVSASPGKTRTINFY--------IVNNE 70
Query: 73 --VIDTPGLFDFSAGSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVV 130
++D PG + ++ S+ + + + + E L S + L+ +I++
Sbjct: 71 FHIVDLPG-YGYAKVSKGE-----------KETWGKMMETYLSSRKNLYE------VILL 112
Query: 131 FSGRDELEANDETLEDYL 148
R E A+D+ + D++
Sbjct: 113 VDIRHEPTADDKMMYDWI 130
>sp|Q9ZBT9|RSGA_STRCO Putative ribosome biogenesis GTPase RsgA OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=rsgA PE=3 SV=1
Length = 366
Score = 41.2 bits (95), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 21 TVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVIDT 76
T VL+G +G GKS N++LG A +A G +T + L G V +IDT
Sbjct: 203 TAVLLGQSGAGKSTLANALLGEAAMDVQAIRDVDGKGRHTTTTRNLLALPGGGV--LIDT 260
Query: 77 PGLFD---FSAGSEFDEIHAALVVFSVRSRF 104
PGL F AG+ D++ A + + RF
Sbjct: 261 PGLRGVGLFDAGNGVDQVFAEIAELAEECRF 291
>sp|Q4DZ91|GUF12_TRYCC Translation factor GUF1 homolog 2, mitochondrial OS=Trypanosoma
cruzi (strain CL Brener) GN=Tc00.1047053504105.210 PE=3
SV=1
Length = 748
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 1 MGGSRI--DDD---CELTS-PSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSS-- 52
MG R DDD C L S P + +R V +V H +GK+ ++IL R S +
Sbjct: 72 MGAPRPPHDDDRAFCTLASFPPSHIRNVAVVAHVDHGKTTLSDAILRRTGVLSGSQVGTY 131
Query: 53 ----------GVT---STCEMHRTVLKDGQ--VVNVIDTPGLFDF 82
G+T TC + V+ DG+ ++N+IDTPG DF
Sbjct: 132 TDRLLVERERGITIKAQTCSIF--VVWDGEEFLLNLIDTPGHVDF 174
>sp|Q8P5H9|RSGA_XANCP Putative ribosome biogenesis GTPase RsgA OS=Xanthomonas campestris
pv. campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=rsgA PE=3 SV=1
Length = 363
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVID 75
RT VLVG +G GKS N++LG + K+ A S G +T HR ++ +ID
Sbjct: 204 RTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTT--HRALIPLPSGACLID 261
Query: 76 TPGLFDFSAGSEFD 89
TPG+ + E D
Sbjct: 262 TPGMRELKPTGEED 275
>sp|B0RNZ3|RSGA_XANCB Putative ribosome biogenesis GTPase RsgA OS=Xanthomonas campestris
pv. campestris (strain B100) GN=rsgA PE=3 SV=1
Length = 363
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVID 75
RT VLVG +G GKS N++LG + K+ A S G +T HR ++ +ID
Sbjct: 204 RTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTT--HRALIPLPSGACLID 261
Query: 76 TPGLFDFSAGSEFD 89
TPG+ + E D
Sbjct: 262 TPGMRELKPTGEED 275
>sp|Q4UYJ6|RSGA_XANC8 Putative ribosome biogenesis GTPase RsgA OS=Xanthomonas campestris
pv. campestris (strain 8004) GN=rsgA PE=3 SV=1
Length = 363
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVID 75
RT VLVG +G GKS N++LG + K+ A S G +T HR ++ +ID
Sbjct: 204 RTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTT--HRALIPLPSGACLID 261
Query: 76 TPGLFDFSAGSEFD 89
TPG+ + E D
Sbjct: 262 TPGMRELKPTGEED 275
>sp|A5IZ33|EFG_MYCAP Elongation factor G OS=Mycoplasma agalactiae (strain PG2) GN=fusA
PE=3 SV=1
Length = 697
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 80/199 (40%), Gaps = 31/199 (15%)
Query: 20 RTVVLVGHTGNGKSATGNSIL----------------GRRAFKSRASSSGVTSTCEMHRT 63
R + ++ H GK+ T IL + + ++ G+T T T
Sbjct: 11 RNIGIMAHIDAGKTTTTERILLHTGKIHKIGETHDGASQMDWMAQEQERGITITSAA-TT 69
Query: 64 VLKDGQVVNVIDTPGLFDFSAGSE--FDEIHAALVVFSVRSRFSQEEE-----ATLHSLQ 116
G+ +N+IDTPG DF+ E + A+ V +S + E AT + +
Sbjct: 70 AFWKGKRINIIDTPGHVDFTVEVERSLRVLDGAVTVLDAQSGVEPQTETVWRQATTYRVP 129
Query: 117 TLFGKNCF-----DYMIVVFSGRDELEANDETLEDYLGRECPKPLKEILHLFDNRCVLFD 171
L N D+ V S + L AN ++ +G+E K I+ L + + +D
Sbjct: 130 RLIYVNKMDKAGADFFASVKSVKTRLNANAVAIQIPIGQES--DFKGIVDLVEMKAYEYD 187
Query: 172 NKTKDAAKRTEQIGKLRSL 190
K ++ AK E L++L
Sbjct: 188 GKPEENAKEIEIPFDLQAL 206
>sp|Q3BPG1|RSGA_XANC5 Putative ribosome biogenesis GTPase RsgA OS=Xanthomonas campestris
pv. vesicatoria (strain 85-10) GN=rsgA PE=3 SV=1
Length = 363
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVID 75
RT VLVG +G GKS N++LG + K+ A S G +T HR ++ +ID
Sbjct: 204 RTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTT--THRALIPLPSGACLID 261
Query: 76 TPGLFDFSAGSEFD 89
TPG+ + E D
Sbjct: 262 TPGMRELKPTGEED 275
>sp|B4S4S6|IF2_PROA2 Translation initiation factor IF-2 OS=Prosthecochloris aestuarii
(strain DSM 271 / SK 413) GN=infB PE=3 SV=1
Length = 936
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 8 DDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKD 67
+D E+ P V ++GH +GK++ + I R + S G+T + L +
Sbjct: 429 EDLEIRPP-----VVTIMGHVDHGKTSLLDYI--RSSNVVAGESGGITQHIGAYEVTLDN 481
Query: 68 GQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNC 123
G+ + +DTPG F+A G++ +I LVV + S Q EA HS K
Sbjct: 482 GRSITFLDTPGHEAFTAMRARGAQVTDI-VILVVAADDSVMPQTIEAINHS------KAA 534
Query: 124 FDYMIVVFSGRDELEANDETLEDYL 148
++V + D+ EAN E + L
Sbjct: 535 NVPIVVAINKIDKPEANPEKIRAQL 559
>sp|Q8PGW9|RSGA_XANAC Putative ribosome biogenesis GTPase RsgA OS=Xanthomonas axonopodis
pv. citri (strain 306) GN=rsgA PE=3 SV=1
Length = 363
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFKSRA----SSSGVTSTCEMHRTVLKDGQVVNVID 75
RT VLVG +G GKS N++LG + K+ A S G +T HR ++ +ID
Sbjct: 204 RTAVLVGSSGAGKSTLTNTLLGTQKMKTNAVRENDSRGRHTTT--HRALIPLPSGACLID 261
Query: 76 TPGLFDFSAGSEFD 89
TPG+ + E D
Sbjct: 262 TPGMRELKPTGEED 275
>sp|Q3B1Z8|IF2_PELLD Translation initiation factor IF-2 OS=Pelodictyon luteolum (strain
DSM 273) GN=infB PE=3 SV=1
Length = 915
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 18/146 (12%)
Query: 7 DDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLK 66
D+D E P V ++GH +GK++ + I R + S G+T +
Sbjct: 407 DEDLETRPP-----VVTIMGHVDHGKTSLLDYI--RNSNVVAGESGGITQHVAAYEVTAS 459
Query: 67 DGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKN 122
+G+ + +DTPG F+A G++ +I LVV + S Q EA H+ K
Sbjct: 460 NGRKITFLDTPGHEAFTAMRARGAQVTDI-VILVVAADDSVMPQTIEAINHA------KA 512
Query: 123 CFDYMIVVFSGRDELEANDETLEDYL 148
++V + D+ EAN E ++ L
Sbjct: 513 AGVPIVVAINKMDKPEANPEKIKTQL 538
>sp|Q8KFT1|IF2_CHLTE Translation initiation factor IF-2 OS=Chlorobium tepidum (strain
ATCC 49652 / DSM 12025 / TLS) GN=infB PE=3 SV=1
Length = 914
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 21 TVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLF 80
V ++GH +GK++ + I RR+ S G+T + L DG+ + +DTPG
Sbjct: 415 VVTIMGHVDHGKTSLLDYI--RRSNVVAGESGGITQHIGAYEVSLDDGRHITFLDTPGHE 472
Query: 81 DFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKNCFDYMIVVFSGRDE 136
F+A G++ +I LVV + S Q EA H+ K ++V + D+
Sbjct: 473 AFTAMRARGAQVTDI-VILVVAADDSVMPQTIEAINHA------KAAGVPIVVAINKIDK 525
Query: 137 LEANDETLEDYL 148
EAN E ++ L
Sbjct: 526 PEANVEKIKAQL 537
>sp|Q41009|TOC34_PEA Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1
Length = 310
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 21 TVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGLF 80
T++++G G GKS+T NSI+G R S + R+ + G +N+IDTPGL
Sbjct: 41 TILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRS--RAGFTLNIIDTPGLI 98
Query: 81 D 81
+
Sbjct: 99 E 99
>sp|Q4DKF7|GUF11_TRYCC Translation factor GUF1 homolog 1, mitochondrial OS=Trypanosoma
cruzi (strain CL Brener) GN=Tc00.1047053503697.90 PE=3
SV=1
Length = 748
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 25/105 (23%)
Query: 1 MGGSRI--DDD---CELTS-PSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSS-- 52
MG R DDD C L S P + +R +V H +GK+ ++IL R S +
Sbjct: 72 MGAPRPPHDDDRAFCTLASFPPSHIRNFAVVAHVDHGKTTLSDAILRRTGVLSGSQVGTY 131
Query: 53 ----------GVT---STCEMHRTVLKDGQ--VVNVIDTPGLFDF 82
G+T TC + V++DG+ ++N+IDTPG DF
Sbjct: 132 TDRLLVERERGITIKAQTCSIF--VVRDGEEFLLNLIDTPGHVDF 174
>sp|O81283|TC159_ARATH Translocase of chloroplast 159, chloroplastic OS=Arabidopsis
thaliana GN=TOC159 PE=1 SV=1
Length = 1503
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 22 VVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLKDGQVVNVIDTPGL 79
++++G G GKSAT NSILG + A TS E+ TV +G + IDTPGL
Sbjct: 858 ILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTV--NGVKITFIDTPGL 913
>sp|Q92SW4|IF2_RHIME Translation initiation factor IF-2 OS=Rhizobium meliloti (strain
1021) GN=infB PE=3 SV=1
Length = 889
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 19/149 (12%)
Query: 4 SRIDDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRT 63
S +DDD + P V ++GH +GK++ ++I R A + G+T ++
Sbjct: 379 SDVDDDMQSRPP-----IVTIMGHVDHGKTSLLDAI--RHANVVAGEAGGITQHIGAYQ- 430
Query: 64 VLKDGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLF 119
V ++GQ + IDTPG F+A G++ +I A LVV + S Q E+ H+
Sbjct: 431 VEQNGQKITFIDTPGHAAFTAMRARGAQATDI-AVLVVAADDSVMPQTIESINHA----- 484
Query: 120 GKNCFDYMIVVFSGRDELEANDETLEDYL 148
K +IV + D+ AN + + L
Sbjct: 485 -KAAGVPIIVAINKIDKPSANPQKVRTEL 512
>sp|B1ZDQ8|IF2_METPB Translation initiation factor IF-2 OS=Methylobacterium populi
(strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=infB PE=3
SV=1
Length = 990
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 6 IDDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVL 65
+++D E P V ++GH +GK++ ++I RRA + G+T ++
Sbjct: 480 LEEDLEPRPP-----VVTIMGHVDHGKTSLLDAI--RRANVVEGEAGGITQHIGAYQVAA 532
Query: 66 KDGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGK 121
G ++ IDTPG F++ G++ +I +VV + Q EA H+ K
Sbjct: 533 PSGDLITFIDTPGHAAFTSMRARGAKVTDI-VVIVVAADDGVMPQTIEAIQHA------K 585
Query: 122 NCFDYMIVVFSGRDELEANDETLEDYL 148
MI+ + D+ +AN + + L
Sbjct: 586 AAGVPMIIAINKIDKADANPQRVRTEL 612
>sp|Q1MN39|IF2_RHIL3 Translation initiation factor IF-2 OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=infB PE=3 SV=1
Length = 917
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 7 DDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTVLK 66
D+D EL S V ++GH +GK++ ++I R A + G+T ++ V +
Sbjct: 408 DEDGELVSRPP---VVTIMGHVDHGKTSLLDAI--RHANVVSGEAGGITQHIGAYQ-VEQ 461
Query: 67 DGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFGKN 122
+GQ + IDTPG F+A G++ +I A LVV + S Q E+ H+ K
Sbjct: 462 NGQKITFIDTPGHAAFTAMRARGAQATDI-AILVVAADDSVMPQTIESINHA------KA 514
Query: 123 CFDYMIVVFSGRDELEANDETLEDYL 148
+IV + D+ EA+ + + + L
Sbjct: 515 AGVPIIVAINKVDKHEADPQKVRNQL 540
>sp|P75590|IF2_MYCPN Translation initiation factor IF-2 OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=infB PE=3 SV=1
Length = 617
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 5 RIDDDCELTSPSNGVRTVVLVGHTGNGKSATGNSILGRRAFKSRASSSGVTSTCEMHRTV 64
+ DDD SP + T++ GH +GK++ ++I R+ + G+T ++
Sbjct: 109 KFDDDPTQLSPRPPIVTIM--GHVDHGKTSLLDAI--RQTNTAAKEFGGITQKIGAYQVK 164
Query: 65 LKDGQVVNVIDTPGLFDFSA----GSEFDEIHAALVVFSVRSRFSQEEEATLHSLQTLFG 120
++G+ + IDTPG F+ G++ +I LVV Q EEA H+
Sbjct: 165 NQEGKTITFIDTPGHEAFTGMRARGAQVTDI-VVLVVAGDDGLKQQTEEAISHA------ 217
Query: 121 KNCFDYMIVVFSGRDELEANDETLEDYLGR 150
K+ +IV + D+ AN + + L +
Sbjct: 218 KSAKTPIIVFINKMDKPTANPDMVIQQLNK 247
>sp|B2I7R5|RSGA_XYLF2 Putative ribosome biogenesis GTPase RsgA OS=Xylella fastidiosa
(strain M23) GN=rsgA PE=3 SV=1
Length = 332
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFK-----SRASSSGVTSTCEMHRTVLKDGQVVNVI 74
RTV L+G +G GKS N++LG + K R S T+T HR +L +I
Sbjct: 195 RTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTT---HRALLPLPSGACLI 251
Query: 75 DTPGL--FDFSAGSEFDEIHAALVVFSVRSRF 104
DTPG+ F+ + E A + + + + RF
Sbjct: 252 DTPGMRELKFTGEEDLVEEFADIELLATQCRF 283
>sp|Q87B73|RSGA_XYLFT Putative ribosome biogenesis GTPase RsgA OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=rsgA PE=3 SV=1
Length = 341
Score = 39.3 bits (90), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 20 RTVVLVGHTGNGKSATGNSILGRRAFK-----SRASSSGVTSTCEMHRTVLKDGQVVNVI 74
RTV L+G +G GKS N++LG + K R S T+T HR +L +I
Sbjct: 204 RTVALLGSSGAGKSTLTNTLLGEQRMKVGEVRQRDSRGRHTTT---HRALLPLPSGACLI 260
Query: 75 DTPGL--FDFSAGSEFDEIHAALVVFSVRSRF 104
DTPG+ F+ + E A + + + + RF
Sbjct: 261 DTPGMRELKFTGEEDLVEEFADIELLATQCRF 292
>sp|A0RQI0|EFG_CAMFF Elongation factor G OS=Campylobacter fetus subsp. fetus (strain
82-40) GN=fusA PE=3 SV=1
Length = 691
Score = 39.3 bits (90), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 91/223 (40%), Gaps = 33/223 (14%)
Query: 14 SPSNGVRTVVLVGHTGNGKSATGNSIL----------------GRRAFKSRASSSGVTST 57
+P N VR + + H GK+ T IL + + G+T T
Sbjct: 5 TPLNMVRNIGIAAHIDAGKTTTSERILFFTGMSHKIGEVHDGAATMDWMEQEKERGITIT 64
Query: 58 CEMHRTVLKDGQVVNVIDTPGLFDFSAGSE--FDEIHAALVVFSVRSRFSQEEE-----A 110
KD Q +N+IDTPG DF+ E + A+ VF + E A
Sbjct: 65 SAATTCFWKDHQ-INLIDTPGHVDFTIEVERSMRVLDGAVAVFCAVGGVQPQSETVWRQA 123
Query: 111 TLHSLQTLFGKNCFDYMIVVFSGRDE-----LEANDETLEDYLGRECPKPLKEILHLFDN 165
+ + + N D + F +E L+AN ++ +G E K ++ L +
Sbjct: 124 NKYRVPRMVFVNKMDRVGANFFNVEEQIKNRLKANPVPIQIPIGAE--DEFKGVIDLIEM 181
Query: 166 RCVLFDNKTKDAAKRTEQIGKLRSLQLAREHAARLKVEVTAKS 208
+ +++++ TK T+ I L+ A+E+ A++ +E A++
Sbjct: 182 KALVWEDDTKPTDYVTKDI-PAELLEKAQEYRAKM-IEAVAET 222
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,106,262
Number of Sequences: 539616
Number of extensions: 3538055
Number of successful extensions: 17694
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 686
Number of HSP's that attempted gapping in prelim test: 17352
Number of HSP's gapped (non-prelim): 798
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)