BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036366
(84 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O81235|SODM1_ARATH Superoxide dismutase [Mn] 1, mitochondrial OS=Arabidopsis
thaliana GN=MSD1 PE=1 SV=2
Length = 231
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/87 (70%), Positives = 71/87 (81%), Gaps = 3/87 (3%)
Query: 1 MALRSLAIRKAI-GLGKSVG--LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHH 57
MA+R +A RK + GL ++ L +RG+QT TLPDLPYDY ALEPAISGEIMQ+HHQKHH
Sbjct: 1 MAIRCVASRKTLAGLKETSSRLLRIRGIQTFTLPDLPYDYGALEPAISGEIMQIHHQKHH 60
Query: 58 QAYVTNYNKAVEQLFQALNKVDTSTVV 84
QAYVTNYN A+EQL QA+NK D STVV
Sbjct: 61 QAYVTNYNNALEQLDQAVNKGDASTVV 87
>sp|P35017|SODM_HEVBR Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis
GN=SODA PE=2 SV=1
Length = 233
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Query: 1 MALRSLAIRKAI--GLGKSVGLG-LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHH 57
MALRSL RK + + GLG LRGLQT +LPDLPYDY ALEPAISGEIMQLHHQKHH
Sbjct: 1 MALRSLVTRKNLPSAFKAATGLGQLRGLQTFSLPDLPYDYGALEPAISGEIMQLHHQKHH 60
Query: 58 QAYVTNYNKAVEQLFQALNKVDTSTVV 84
Q Y+TNYNKA+EQL A+ K D++ VV
Sbjct: 61 QTYITNYNKALEQLNDAIEKGDSAAVV 87
>sp|P11796|SODM_NICPL Superoxide dismutase [Mn], mitochondrial OS=Nicotiana
plumbaginifolia GN=SODA PE=1 SV=1
Length = 228
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 63/83 (75%)
Query: 1 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAY 60
MALR+L R+ + G LRGLQT +LPDLPYDY ALEPAISG+IMQLHHQ HHQ Y
Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYDYGALEPAISGDIMQLHHQNHHQTY 60
Query: 61 VTNYNKAVEQLFQALNKVDTSTV 83
VTNYNKA+EQL A++K D TV
Sbjct: 61 VTNYNKALEQLHDAISKGDAPTV 83
>sp|Q9SM64|SODM_PRUPE Superoxide dismutase [Mn], mitochondrial OS=Prunus persica GN=SOD
PE=2 SV=1
Length = 228
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/83 (65%), Positives = 63/83 (75%)
Query: 1 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAY 60
MALR+L R+ + G LRGLQT +LPDLPY+Y ALEPAISG+IMQLHHQ HHQ Y
Sbjct: 1 MALRTLVSRRTLATGLGFRQQLRGLQTFSLPDLPYNYGALEPAISGDIMQLHHQNHHQTY 60
Query: 61 VTNYNKAVEQLFQALNKVDTSTV 83
VTNYNKA+EQL A++K D TV
Sbjct: 61 VTNYNKALEQLHDAISKGDAPTV 83
>sp|O49066|SODM_CAPAN Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum
GN=SODA PE=2 SV=1
Length = 228
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 61/83 (73%)
Query: 1 MALRSLAIRKAIGLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAY 60
MALR+L +K + LR +QT +LPDL YDY ALEPAISGEIMQLHHQKHHQ Y
Sbjct: 1 MALRNLMTKKPFAGILTFRQQLRCVQTFSLPDLSYDYGALEPAISGEIMQLHHQKHHQTY 60
Query: 61 VTNYNKAVEQLFQALNKVDTSTV 83
+TNYN A++QL A+NK D+ TV
Sbjct: 61 ITNYNNALQQLHDAINKGDSPTV 83
>sp|P27084|SODM_PEA Superoxide dismutase [Mn], mitochondrial OS=Pisum sativum GN=SODA
PE=2 SV=2
Length = 233
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/96 (56%), Positives = 62/96 (64%), Gaps = 12/96 (12%)
Query: 1 MALRSLAIRKAIGL-----GKSVGLGL-------RGLQTVTLPDLPYDYSALEPAISGEI 48
MA R+L RK + K +G + RGL TLPDL YDY ALEP ISGEI
Sbjct: 1 MAARTLLCRKTLSSVLRNDAKPIGAAIAAASTQSRGLHVFTLPDLAYDYGALEPVISGEI 60
Query: 49 MQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
MQ+HHQKHHQ Y+TNYNKA+EQL A+ K DTST V
Sbjct: 61 MQIHHQKHHQTYITNYNKALEQLHDAVAKADTSTTV 96
>sp|P09233|SODM1_MAIZE Superoxide dismutase [Mn] 3.1, mitochondrial OS=Zea mays
GN=SODA.4 PE=2 SV=1
Length = 235
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/91 (59%), Positives = 65/91 (71%), Gaps = 7/91 (7%)
Query: 1 MALRSLAIRKAI-----GLGK--SVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHH 53
MALR+LA +K + G G+ + RG+ TVTLPDL YD+ ALEPAISGEIM+LHH
Sbjct: 1 MALRTLASKKVLSFPFGGAGRPLAAAASARGVTTVTLPDLSYDFGALEPAISGEIMRLHH 60
Query: 54 QKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
QKHH YV NYNKA+EQL A++K D S VV
Sbjct: 61 QKHHATYVANYNKALEQLETAVSKGDASAVV 91
>sp|Q43008|SODM_ORYSJ Superoxide dismutase [Mn], mitochondrial OS=Oryza sativa subsp.
japonica GN=SODA PE=2 SV=2
Length = 231
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/87 (59%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 1 MALRSLAIRKAIGLGKSVGLGL---RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHH 57
MALR+LA RK + RG+ TV LPDLPYDY ALEPAISGEIM+LHHQKHH
Sbjct: 1 MALRTLASRKTLAAAALPLAAAAAARGVTTVALPDLPYDYGALEPAISGEIMRLHHQKHH 60
Query: 58 QAYVTNYNKAVEQLFQALNKVDTSTVV 84
YV NYNKA+EQL A+ K D +V
Sbjct: 61 ATYVANYNKALEQLDAAVAKGDAPAIV 87
>sp|P41980|SODM4_MAIZE Superoxide dismutase [Mn] 3.4, mitochondrial OS=Zea mays
GN=SODA.3 PE=2 SV=1
Length = 233
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 61/89 (68%), Gaps = 5/89 (5%)
Query: 1 MALRSLAIRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQK 55
MALR+LA + A+ G + RG+ TV LPDL YD+ ALEPAISGEIM+LHHQK
Sbjct: 1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPAISGEIMRLHHQK 60
Query: 56 HHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
HH YV NYNKA+EQL A+ K D S VV
Sbjct: 61 HHATYVGNYNKALEQLDAAVAKGDASAVV 89
>sp|P41979|SODM3_MAIZE Superoxide dismutase [Mn] 3.3, mitochondrial OS=Zea mays
GN=SODA.2 PE=2 SV=1
Length = 233
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 1 MALRSLAIRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQK 55
MALR+LA + A+ G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQK
Sbjct: 1 MALRTLASKNALSFALGGAARPSAESARGVTTVALPDLSYDFGALEPVISGEIMRLHHQK 60
Query: 56 HHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+H YV NYNKA+EQ+ + K D S VV
Sbjct: 61 NHATYVVNYNKALEQIDDVVVKGDDSAVV 89
>sp|P41978|SODM2_MAIZE Superoxide dismutase [Mn] 3.2, mitochondrial OS=Zea mays
GN=SODA.1 PE=2 SV=1
Length = 232
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
Query: 1 MALRSLAIRKAI-----GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQK 55
MALR+LA + A+ G + RG+ TV LPDL YD+ ALEP ISGEIM+LHHQK
Sbjct: 1 MALRTLASKNALSFALGGAARPSAASARGVTTVALPDLSYDFGALEPVISGEIMRLHHQK 60
Query: 56 HHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
HH YV NYNKA+EQL + K D S VV
Sbjct: 61 HHATYVVNYNKALEQLDAVVVKGDASAVV 89
>sp|O96347|SODM_CHAFE Superoxide dismutase [Mn], mitochondrial OS=Charybdis feriatus
PE=2 SV=1
Length = 224
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/69 (60%), Positives = 48/69 (69%)
Query: 16 KSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQAL 75
+S+ GL Q TLPDLPYDY ALEP IS EIMQLHH KHHQ YV N N A E+L +A
Sbjct: 10 RSLRAGLWCRQKHTLPDLPYDYGALEPTISAEIMQLHHSKHHQTYVNNLNVAEEKLAEAK 69
Query: 76 NKVDTSTVV 84
K D ST++
Sbjct: 70 EKGDVSTII 78
>sp|Q9LYK8|SODM2_ARATH Superoxide dismutase [Mn] 2, mitochondrial OS=Arabidopsis
thaliana GN=MSD2 PE=1 SV=1
Length = 241
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 50/70 (71%)
Query: 15 GKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQA 74
G ++ L ++T +LPDLPY Y ALEPAIS EIM+LHHQKHHQ YVT YNKA+ L A
Sbjct: 23 GATMEPCLESMKTASLPDLPYAYDALEPAISEEIMRLHHQKHHQTYVTQYNKALNSLRSA 82
Query: 75 LNKVDTSTVV 84
+ D S+VV
Sbjct: 83 MADGDHSSVV 92
>sp|Q00637|SODM_DROME Superoxide dismutase [Mn], mitochondrial OS=Drosophila
melanogaster GN=Sod2 PE=2 SV=3
Length = 217
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Query: 21 GLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDT 80
G+RG T LP LPYDY+ALEP I EIM+LHHQKHHQ YV N N A EQL +A +K DT
Sbjct: 14 GVRGKHT--LPKLPYDYAALEPIICREIMELHHQKHHQTYVNNLNAAEEQLEEAKSKSDT 71
Query: 81 STVV 84
+ ++
Sbjct: 72 TKLI 75
>sp|P80293|SODM_PROFR Superoxide dismutase [Mn/Fe] OS=Propionibacterium freudenreichii
subsp. shermanii GN=sodA PE=1 SV=1
Length = 201
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 83
TLP+LPYDYSALEP ISGEIM+LHH KHH+AYV N A+++L +A +K D +
Sbjct: 4 TLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAI 58
>sp|Q55BJ9|SODM_DICDI Superoxide dismutase [Mn], mitochondrial OS=Dictyostelium
discoideum GN=sod2 PE=3 SV=1
Length = 226
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 1 MALRSLAIRKAIGLGKSVGLGLRGLQT--VTLPDLPYDYSALEPAISGEIMQLHHQKHHQ 58
M RSL + K +G +S GL G Q+ TLPDLPYDY AL P IS EIM LHH+KHHQ
Sbjct: 1 MLPRSLKLIKKVG--ESNGLRNFGSQSNSYTLPDLPYDYGALSPVISPEIMTLHHKKHHQ 58
Query: 59 AYVTNYNKAVEQLFQALNKVDTSTVV 84
YV N N A+++L A + D + ++
Sbjct: 59 TYVNNLNIALDKLSSASSAKDVAQMI 84
>sp|P41981|SODM_ONCVO Superoxide dismutase [Mn], mitochondrial OS=Onchocerca volvulus
GN=sod-2 PE=2 SV=1
Length = 223
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 14 LGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQ 73
+GK+ L + L+ V LPDLPYDY ALEP +S EIMQ+HH KHH AYV N+A E++ +
Sbjct: 13 VGKNYCLNTQRLKHV-LPDLPYDYGALEPILSAEIMQVHHGKHHAAYVNALNQAEEKVKE 71
Query: 74 ALNKVDTSTVV 84
AL K DT V
Sbjct: 72 ALAKGDTQAAV 82
>sp|P09671|SODM_MOUSE Superoxide dismutase [Mn], mitochondrial OS=Mus musculus GN=Sod2
PE=1 SV=3
Length = 222
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D +T V
Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNATEEKYHEALAKGDVTTQV 82
>sp|P41976|SODM_BOVIN Superoxide dismutase [Mn], mitochondrial OS=Bos taurus GN=SOD2
PE=2 SV=1
Length = 222
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%), Gaps = 2/65 (3%)
Query: 20 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD 79
LG R Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N A E+ +AL K D
Sbjct: 20 LGSR--QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVAEEKYREALEKGD 77
Query: 80 TSTVV 84
+ +
Sbjct: 78 VTAQI 82
>sp|P49114|SODM_CAVPO Superoxide dismutase [Mn], mitochondrial (Fragment) OS=Cavia
porcellus GN=SOD2 PE=2 SV=1
Length = 211
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
Query: 20 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD 79
LG+R Q +LPDLPYDY AL+P I+ EIMQLHH KHH AY+ N N A E+ +AL K D
Sbjct: 20 LGVR--QKHSLPDLPYDYGALQPHINAEIMQLHHSKHHAAYLNNLNIAEEKYQEALAKGD 77
Query: 80 TSTVV 84
+ V
Sbjct: 78 VTAQV 82
>sp|P41977|SODM2_CAEEL Superoxide dismutase [Mn] 2, mitochondrial OS=Caenorhabditis
elegans GN=sod-3 PE=1 SV=2
Length = 218
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 77
TLPDLP+DY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K
Sbjct: 27 TLPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
>sp|P31161|SODM1_CAEEL Superoxide dismutase [Mn] 1, mitochondrial OS=Caenorhabditis
elegans GN=sod-2 PE=1 SV=1
Length = 221
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 39/49 (79%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 77
+LPDLPYDY+ LEP IS EIMQLHHQKHH YV N N+ E+L +A++K
Sbjct: 27 SLPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSK 75
>sp|Q9PKA0|SODM_CHLMU Superoxide dismutase [Mn] OS=Chlamydia muridarum (strain MoPn /
Nigg) GN=sodA PE=3 SV=2
Length = 205
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 25 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 71
+ LPDLPYDY ALEP IS EIM LHHQKHHQ Y+ N N+A++ L
Sbjct: 3 FSSYKLPDLPYDYDALEPVISAEIMHLHHQKHHQGYINNLNEALKSL 49
>sp|P07895|SODM_RAT Superoxide dismutase [Mn], mitochondrial OS=Rattus norvegicus
GN=Sod2 PE=1 SV=2
Length = 222
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH YV N N E+ +AL K D +T V
Sbjct: 27 SLPDLPYDYGALEPHINAQIMQLHHSKHHATYVNNLNVTEEKYHEALAKGDVTTQV 82
>sp|Q5FB30|SODM_MACNE Superoxide dismutase [Mn], mitochondrial OS=Macaca nemestrina
GN=SOD2 PE=2 SV=1
Length = 222
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 9 RKAIGLGKSVG--LGLRG-LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN 65
R G G+ + LG G Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N
Sbjct: 4 RAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN 63
Query: 66 KAVEQLFQALNKVDTSTVV 84
E+ +AL K D + +
Sbjct: 64 VTEEKYQEALAKGDVTAQI 82
>sp|Q8HXP3|SODM_MACFA Superoxide dismutase [Mn], mitochondrial OS=Macaca fascicularis
GN=SOD2 PE=2 SV=3
Length = 222
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 9 RKAIGLGKSVG--LGLRG-LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN 65
R G G+ + LG G Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N
Sbjct: 4 RAVCGTGRQLAPALGYLGSRQKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLN 63
Query: 66 KAVEQLFQALNKVDTSTVV 84
E+ +AL K D + +
Sbjct: 64 VTEEKYQEALAKGDVTAQI 82
>sp|Q8HXP6|SODM_PONPY Superoxide dismutase [Mn], mitochondrial OS=Pongo pygmaeus
GN=SOD2 PE=2 SV=3
Length = 222
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 20 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD 79
LG R Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D
Sbjct: 20 LGSR--QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGD 77
Query: 80 TSTVV 84
+ +
Sbjct: 78 VTAQI 82
>sp|P04179|SODM_HUMAN Superoxide dismutase [Mn], mitochondrial OS=Homo sapiens GN=SOD2
PE=1 SV=2
Length = 222
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 20 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD 79
LG R Q +LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D
Sbjct: 20 LGSR--QKHSLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGD 77
Query: 80 TSTVV 84
+ +
Sbjct: 78 VTAQI 82
>sp|Q8HXP1|SODM_CEBAP Superoxide dismutase [Mn], mitochondrial OS=Cebus apella GN=SOD2
PE=2 SV=2
Length = 198
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQI 58
>sp|Q8HXP0|SODM_CALJA Superoxide dismutase [Mn], mitochondrial OS=Callithrix jacchus
GN=SOD2 PE=2 SV=2
Length = 198
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNDTEEKYKEALAKGDVTAQI 58
>sp|O84296|SODM_CHLTR Superoxide dismutase [Mn] OS=Chlamydia trachomatis (strain
D/UW-3/Cx) GN=sodA PE=3 SV=1
Length = 206
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 35/47 (74%)
Query: 25 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 71
+ LP LPYDY ALEP IS EIMQLHHQKHHQ Y+ N N+A++ L
Sbjct: 3 FSSYMLPALPYDYDALEPVISAEIMQLHHQKHHQGYINNLNEALKSL 49
>sp|Q694A3|SODM_GLOMM Superoxide dismutase [Mn], mitochondrial OS=Glossina morsitans
morsitans GN=Sod2 PE=2 SV=1
Length = 216
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 13 GLGKSVGLGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLF 72
L +++ +RG T LP LPYDY AL P IS +I+++HH KHHQ YV N N EQ+
Sbjct: 7 NLSRTIKAAVRGKHT--LPKLPYDYGALAPIISKDILEVHHGKHHQTYVNNLNAVEEQMT 64
Query: 73 QALNKVDTSTVV 84
+A +K D + VV
Sbjct: 65 EAHSKKDVNKVV 76
>sp|Q8HXP2|SODM_MACMU Superoxide dismutase [Mn], mitochondrial OS=Macaca mulatta
GN=SOD2 PE=2 SV=2
Length = 198
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQI 58
>sp|Q8HXP4|SODM_MACFU Superoxide dismutase [Mn], mitochondrial OS=Macaca fuscata
fuscata GN=SOD2 PE=2 SV=2
Length = 198
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQI 58
>sp|Q8HXP7|SODM_PANTR Superoxide dismutase [Mn], mitochondrial OS=Pan troglodytes
GN=SOD2 PE=2 SV=2
Length = 198
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQI 58
>sp|P41982|SODM_RABIT Superoxide dismutase [Mn], mitochondrial (Fragment)
OS=Oryctolagus cuniculus GN=SOD2 PE=2 SV=1
Length = 202
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 23 RGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTST 82
RG++ +LPDLPYDY ALEP I+ +IM+LHH KHH AYV N N E+ +AL + D +
Sbjct: 3 RGMKH-SLPDLPYDYGALEPHINAQIMELHHSKHHAAYVNNLNATEEKYREALARGDVTA 61
Query: 83 VV 84
V
Sbjct: 62 HV 63
>sp|Q8HXP5|SODM_HYLLA Superoxide dismutase [Mn], mitochondrial OS=Hylobates lar GN=SOD2
PE=2 SV=2
Length = 198
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
+LPDLPYDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D + +
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQI 58
>sp|Q9Y783|SODM_NEUCR Superoxide dismutase [Mn], mitochondrial OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=sod-2 PE=3 SV=1
Length = 245
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 22 LRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVE 69
+ GL T +LP LPY Y+ALEP IS +IM+LHH KHHQ YVTN N A++
Sbjct: 28 MAGLATYSLPQLPYAYNALEPYISAQIMELHHSKHHQTYVTNLNNALK 75
>sp|O51917|SODF_STRCO Superoxide dismutase [Fe-Zn] 1 OS=Streptomyces coelicolor (strain
ATCC BAA-471 / A3(2) / M145) GN=sodF1 PE=1 SV=3
Length = 213
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 25 LQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNK 77
+ TLP+LPYDYSAL P IS EI++LHH KHH AYV N +EQL +A +K
Sbjct: 1 MSVYTLPELPYDYSALAPVISPEIIELHHDKHHAAYVKGANDTLEQLAEARDK 53
>sp|O75007|SODM_PENCH Superoxide dismutase [Mn], mitochondrial OS=Penicillium
chrysogenum GN=SOD PE=1 SV=1
Length = 210
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 38/59 (64%)
Query: 26 QTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
QT TLP LPY Y ALEP IS +IM+LHHQKHHQ Y+ N N A+ A D T++
Sbjct: 4 QTHTLPPLPYAYDALEPVISKQIMELHHQKHHQTYINNLNAALSAQASATASNDVPTLI 62
>sp|O93724|SODF_PYRAE Superoxide dismutase [Fe] OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=sod
PE=1 SV=2
Length = 211
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/43 (72%), Positives = 34/43 (79%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 71
TLP LPY Y+ALEP IS EIMQLHHQKHHQ YV N A+E+L
Sbjct: 8 TLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKL 50
>sp|P53651|SODM_NOCAS Superoxide dismutase [Mn] OS=Nocardia asteroides GN=sodA PE=3
SV=2
Length = 207
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 38/56 (67%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
TLPDL YDYSALEP ISG+I +LHH KHH AYV N A+E+L A D S +
Sbjct: 5 TLPDLDYDYSALEPHISGQINELHHSKHHAAYVAGANTALEKLEAAREAGDHSAIF 60
>sp|Q9Z9C4|SODM_CHLPN Superoxide dismutase [Mn] OS=Chlamydia pneumoniae GN=sodA PE=3
SV=1
Length = 207
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/43 (67%), Positives = 35/43 (81%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 71
+LP+LPYDY ALEP IS EIM LHHQKHHQ Y+ N N A+++L
Sbjct: 7 SLPELPYDYDALEPVISSEIMILHHQKHHQIYINNLNAALKRL 49
>sp|Q9XS41|SODM_HORSE Superoxide dismutase [Mn], mitochondrial OS=Equus caballus
GN=SOD2 PE=2 SV=1
Length = 222
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 20 LGLRGLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVD 79
LG R Q +LPDL YDY ALEP I+ +IMQLHH KHH AYV N N E+ +AL K D
Sbjct: 20 LGSR--QKHSLPDLQYDYGALEPYINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGD 77
Query: 80 TSTVV 84
+ +
Sbjct: 78 VTAQI 82
>sp|Q3MSU9|SODB_ASPNG Superoxide dismutase [Mn], mitochondrial OS=Aspergillus niger
GN=sodB PE=3 SV=1
Length = 210
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/38 (73%), Positives = 31/38 (81%)
Query: 28 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYN 65
TLPDLPYDY ALEP IS +IM+LHH+KHHQ YV N N
Sbjct: 5 CTLPDLPYDYDALEPIISKQIMELHHKKHHQTYVNNLN 42
>sp|Q9UQX0|SODM_SCHPO Superoxide dismutase [Mn], mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=sod2 PE=1 SV=1
Length = 218
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 23 RGLQT-VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQL 71
RG+ T TLP LPY Y+ALEPA+S IM+LHH KHHQ YV N N A E+L
Sbjct: 20 RGVHTKATLPPLPYAYNALEPALSETIMKLHHDKHHQTYVNNLNAAQEKL 69
>sp|P00447|SODM_YEAST Superoxide dismutase [Mn], mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SOD2 PE=1
SV=1
Length = 233
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 28 VTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKV 78
VTLPDL +D+ ALEP ISG+I +LH+ KHHQ YV +N AV+Q FQ L+ +
Sbjct: 28 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQ-FQELSDL 77
>sp|P13367|SODM_MYCLE Superoxide dismutase [Mn] OS=Mycobacterium leprae (strain TN)
GN=sodA PE=3 SV=3
Length = 207
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 39/56 (69%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
TLPDL +DY+ALEP ISGEI ++HH KHH AYV N A+ +L +A K D S +
Sbjct: 5 TLPDLDWDYAALEPHISGEINEIHHTKHHAAYVKGVNDALAKLDEARAKDDHSAIF 60
>sp|Q6BQZ1|SODM_DEBHA Probable superoxide dismutase [Mn], mitochondrial OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=DEHA2E01232g PE=3 SV=1
Length = 211
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 24 GLQTVTLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTV 83
G + LP L + Y +LEP ISG+I ++HH+KHHQ YV YN A+EQL +A ++ D
Sbjct: 8 GKNKIELPQLDWAYDSLEPYISGKINEIHHKKHHQTYVNGYNSAIEQLIEAESQGDVKKA 67
Query: 84 V 84
+
Sbjct: 68 I 68
>sp|Q7TVI9|SODF_MYCBO Superoxide dismutase [Fe] OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=sodB PE=3 SV=1
Length = 207
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 38/56 (67%)
Query: 29 TLPDLPYDYSALEPAISGEIMQLHHQKHHQAYVTNYNKAVEQLFQALNKVDTSTVV 84
TLPDL +DY ALEP ISG+I +LHH KHH YV N AV +L +A K D S ++
Sbjct: 5 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAIL 60
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,633,619
Number of Sequences: 539616
Number of extensions: 933370
Number of successful extensions: 3092
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 2861
Number of HSP's gapped (non-prelim): 231
length of query: 84
length of database: 191,569,459
effective HSP length: 55
effective length of query: 29
effective length of database: 161,890,579
effective search space: 4694826791
effective search space used: 4694826791
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)