Query 036367
Match_columns 198
No_of_seqs 14 out of 16
Neff 1.9
Searched_HMMs 13730
Date Mon Mar 25 20:38:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036367.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036367hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1x6fa1 g.37.1.1 (A:8-82) Zinc 41.2 2.4 0.00017 29.4 -0.2 25 68-94 10-34 (75)
2 d2fk4a1 g.90.1.1 (A:4-67) E6 o 33.9 3 0.00022 27.4 -0.7 10 76-85 53-62 (64)
3 d2h8aa1 f.56.1.1 (A:9-147) Mic 33.4 19 0.0014 24.9 3.7 59 42-105 62-121 (139)
4 d2j44a1 b.3.1.3 (A:110-223) Pu 31.4 7.7 0.00056 26.3 1.1 18 150-167 4-21 (114)
5 d2j44a2 b.3.1.3 (A:7-109) Pull 28.5 11 0.0008 25.7 1.5 15 154-168 3-18 (103)
6 d2j43a2 b.3.1.3 (A:112-223) Pu 27.4 9.7 0.0007 25.9 1.1 18 151-168 3-20 (112)
7 d2j73a1 b.3.1.3 (A:6-107) Pull 21.7 13 0.00093 24.9 0.8 17 152-168 2-18 (102)
8 d1ppjd2 f.23.11.1 (D:196-241) 16.7 92 0.0067 18.8 4.0 8 79-86 28-35 (46)
9 d1pk5a_ a.123.1.1 (A:) Orphan 16.5 19 0.0014 26.0 0.8 36 80-115 81-116 (242)
10 d2ct1a1 g.37.1.1 (A:44-71) Tra 15.9 15 0.0011 21.2 -0.0 11 76-86 2-12 (28)
No 1
>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.25 E-value=2.4 Score=29.40 Aligned_cols=25 Identities=36% Similarity=0.489 Sum_probs=16.8
Q ss_pred hhccCCCCccccchhhhHHHHHHHHHH
Q 036367 68 AQSLSQSTRLQCRHCWIPITLLSLAHL 94 (198)
Q Consensus 68 ~~a~s~p~rLqCRHcWaPi~LlslaHl 94 (198)
.-..++++-.||+||-.- ++|++-|
T Consensus 10 ~~~~~~s~~yQC~HCd~K--~~s~~el 34 (75)
T d1x6fa1 10 NGPRLQNSTYQCKHCDSK--LQSTAEL 34 (75)
T ss_dssp CCSCCCCSCEECSSSCCE--ESSHHHH
T ss_pred CCcccCCceeeechhHHH--HhhHHHH
Confidence 345677888999999753 4455433
No 2
>d2fk4a1 g.90.1.1 (A:4-67) E6 oncoprotein {Human papillomavirus type 16 [TaxId: 333760]}
Probab=33.93 E-value=3 Score=27.42 Aligned_cols=10 Identities=20% Similarity=0.424 Sum_probs=7.8
Q ss_pred ccccchhhhH
Q 036367 76 RLQCRHCWIP 85 (198)
Q Consensus 76 rLqCRHcWaP 85 (198)
+=.|++||-|
T Consensus 53 rG~C~~C~~~ 62 (64)
T d2fk4a1 53 TGRCMSCSRS 62 (64)
T ss_dssp ESHHHHHSCC
T ss_pred EEECcccCCC
Confidence 3469999987
No 3
>d2h8aa1 f.56.1.1 (A:9-147) Microsomal glutathione S-transferase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=33.39 E-value=19 Score=24.94 Aligned_cols=59 Identities=19% Similarity=0.152 Sum_probs=41.3
Q ss_pred hhhhHhHHHHHHHHHHHHHHHHHHhhhhccCCCCccccchhhhHHHHHHHHHHHHHHHHh-hhhh
Q 036367 42 RAIDLQKKKLHKHFLLFFIFLGLTFNAQSLSQSTRLQCRHCWIPITLLSLAHLFFYVSVA-QTLR 105 (198)
Q Consensus 42 RAiD~QKkeLwklF~~FFiFLal~f~~~a~s~p~rLqCRHcWaPi~LlslaHl~fYvavA-qtLR 105 (198)
|+.+++..-+. -+-+|+++.+......+++......+|+ ..+.-++|.+.|+..- |-+|
T Consensus 62 R~~rah~N~~E----~~~~F~~~~l~~~~~~~~~~~~~~l~~~-f~~~Ri~h~~~y~~~~~~p~R 121 (139)
T d2h8aa1 62 RVRRAHLNDLE----NIVPFLGIGLLYSLSGPDLSTALIHFRI-FVGARIYHTIAYLTPLPQPNR 121 (139)
T ss_dssp HHHHHHHHHHH----TTHHHHHHHHHTTTSCCCSTTHHHHHHH-HHHHHHHHHHHHHSSCSHHHH
T ss_pred HHHHHHHcchh----HHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHHHHHHHhcCCccHH
Confidence 55555554433 3345666677777778888888888988 6677899999998654 4455
No 4
>d2j44a1 b.3.1.3 (A:110-223) Pullulanase PulA {Streptococcus pneumoniae [TaxId: 1313]}
Probab=31.42 E-value=7.7 Score=26.32 Aligned_cols=18 Identities=17% Similarity=0.359 Sum_probs=15.2
Q ss_pred ccCcceeecccCCCchhh
Q 036367 150 AGCGEFEIHYQEPPESYF 167 (198)
Q Consensus 150 v~~~e~Ev~YQEPpesY~ 167 (198)
+++.-+.|||+.|...|-
T Consensus 4 ~p~~~vrVHY~r~dgdY~ 21 (114)
T d2j44a1 4 QPAGTVRVNYYRTDGNYD 21 (114)
T ss_dssp CCSSEEEEEEECSSSCCT
T ss_pred CCCCEEEEEEecCCCCcC
Confidence 466679999999999985
No 5
>d2j44a2 b.3.1.3 (A:7-109) Pullulanase PulA {Streptococcus pneumoniae [TaxId: 1313]}
Probab=28.49 E-value=11 Score=25.70 Aligned_cols=15 Identities=33% Similarity=0.485 Sum_probs=12.6
Q ss_pred ceeecccC-CCchhhh
Q 036367 154 EFEIHYQE-PPESYFG 168 (198)
Q Consensus 154 e~Ev~YQE-PpesY~~ 168 (198)
.+.||||. |...|-+
T Consensus 3 ~~riHY~r~pdg~Y~~ 18 (103)
T d2j44a2 3 YFRIHVKKLPEENKDA 18 (103)
T ss_dssp EEEEEESSCSSSCGGG
T ss_pred eEEEEEEeCCCCCccc
Confidence 58899998 9999864
No 6
>d2j43a2 b.3.1.3 (A:112-223) Pullulanase PulA {Streptococcus pyogenes [TaxId: 1314]}
Probab=27.44 E-value=9.7 Score=25.85 Aligned_cols=18 Identities=22% Similarity=0.375 Sum_probs=15.0
Q ss_pred cCcceeecccCCCchhhh
Q 036367 151 GCGEFEIHYQEPPESYFG 168 (198)
Q Consensus 151 ~~~e~Ev~YQEPpesY~~ 168 (198)
++..+.|||+.|...|-+
T Consensus 3 ~~~~v~vhY~r~dgdY~~ 20 (112)
T d2j43a2 3 KEGYLRINYHNQSGHYDN 20 (112)
T ss_dssp CTTEEEEEEECSSCCCTT
T ss_pred cCCEEEEEEeCCCCCccc
Confidence 455799999999999854
No 7
>d2j73a1 b.3.1.3 (A:6-107) Pullulanase PulA {Thermotoga maritima [TaxId: 2336]}
Probab=21.68 E-value=13 Score=24.88 Aligned_cols=17 Identities=24% Similarity=0.370 Sum_probs=14.1
Q ss_pred CcceeecccCCCchhhh
Q 036367 152 CGEFEIHYQEPPESYFG 168 (198)
Q Consensus 152 ~~e~Ev~YQEPpesY~~ 168 (198)
+..+.||||.|...|-+
T Consensus 2 e~~v~ihY~r~dg~Y~~ 18 (102)
T d2j73a1 2 ETTIVVHYHRYDGKYDG 18 (102)
T ss_dssp CEEEEEEEECTTCCCTT
T ss_pred CcEEEEEEECCCCCcCc
Confidence 34689999999999964
No 8
>d1ppjd2 f.23.11.1 (D:196-241) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Cow (Bos taurus) [TaxId: 9913]}
Probab=16.66 E-value=92 Score=18.80 Aligned_cols=8 Identities=38% Similarity=0.771 Sum_probs=5.5
Q ss_pred cchhhhHH
Q 036367 79 CRHCWIPI 86 (198)
Q Consensus 79 CRHcWaPi 86 (198)
=||=|+|+
T Consensus 28 KR~~Ws~l 35 (46)
T d1ppjd2 28 KRHKWSVL 35 (46)
T ss_dssp HHHHHHHH
T ss_pred HHHhhhhc
Confidence 37777775
No 9
>d1pk5a_ a.123.1.1 (A:) Orphan nuclear receptor NR5a2 (LRH-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=16.52 E-value=19 Score=25.97 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=23.1
Q ss_pred chhhhHHHHHHHHHHHHHHHHhhhhhhhccchhhhh
Q 036367 80 RHCWIPITLLSLAHLFFYVSVAQTLRCINGFKYQRR 115 (198)
Q Consensus 80 RHcWaPi~LlslaHl~fYvavAqtLRciNgFkYQRr 115 (198)
|+||.++.++.+++--.-......+-..||..+.+.
T Consensus 81 k~~~~el~iL~~a~~s~~~~~~~~~~~~~g~~~~~~ 116 (242)
T d1pk5a_ 81 QNCWSELLILDHIYRQVAHGKEGTIFLVTGEHVDYS 116 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCSSEEECTTSCEEEHH
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeEecCCCcccch
Confidence 689999988887764333333344666777766543
No 10
>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.85 E-value=15 Score=21.25 Aligned_cols=11 Identities=36% Similarity=0.921 Sum_probs=7.6
Q ss_pred ccccchhhhHH
Q 036367 76 RLQCRHCWIPI 86 (198)
Q Consensus 76 rLqCRHcWaPi 86 (198)
..||.||-.-|
T Consensus 2 k~qcphc~tii 12 (28)
T d2ct1a1 2 KFHCPHCDTVI 12 (28)
T ss_dssp SEECSSSSCEE
T ss_pred CccCCcchhhe
Confidence 46899996544
Done!