Your job contains 1 sequence.
>036368
MCSTFSIAANPCIGVSNDKIMCQKTTVAATRAGVTIAPRQRSSHIFPGLSRQGIPQSTAL
HVSEIVERQSQDNSLAMEDACRSKPQFHPMFLEEAYERCRNICAEYAKTFYLGTLLMTEE
RQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRPYDMLDAALTDTVF
KFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSA
QSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDVFARKVTDNWRE
FMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVG
RMKKFLMLPQAYNRAQSK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036368
(378 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q6ED64 - symbol:Q6ED64 "Phytoene synthase 1" sp... 1100 2.0e-111 1
TAIR|locus:2167225 - symbol:PSY "PHYTOENE SYNTHASE" speci... 1083 1.3e-109 1
UNIPROTKB|P37295 - symbol:al-2 "Bifunctional lycopene cyc... 146 5.8e-09 2
UNIPROTKB|Q9UUQ6 - symbol:CARRP "Bifunctional lycopene cy... 143 8.2e-09 2
UNIPROTKB|Q8X0Z1 - symbol:carRA "Bifunctional lycopene cy... 145 1.9e-08 3
UNIPROTKB|Q67GH9 - symbol:carRA "Bifunctional lycopene cy... 136 6.1e-08 2
UNIPROTKB|Q7Z859 - symbol:crtYB "Bifunctional lycopene cy... 114 4.9e-07 2
UNIPROTKB|Q60AN4 - symbol:sqs "Squalene synthase" species... 142 6.2e-07 1
MGI|MGI:1924197 - symbol:Ndufaf6 "NADH dehydrogenase (ubi... 130 1.2e-05 1
UNIPROTKB|Q9P854 - symbol:carRA "Bifunctional lycopene cy... 133 1.5e-05 1
RGD|1309085 - symbol:Ndufaf6 "NADH dehydrogenase (ubiquin... 127 2.5e-05 1
UNIPROTKB|A7YVD7 - symbol:NDUFAF6 "NADH dehydrogenase (ub... 123 7.2e-05 1
WB|WBGene00007145 - symbol:B0334.5 species:6239 "Caenorha... 124 8.4e-05 1
UNIPROTKB|Q330K2 - symbol:NDUFAF6 "NADH dehydrogenase (ub... 115 0.00057 1
ZFIN|ZDB-GENE-100112-1 - symbol:ndufaf6 "NADH dehydrogena... 115 0.00060 1
>UNIPROTKB|Q6ED64 [details] [associations]
symbol:Q6ED64 "Phytoene synthase 1" species:39946 "Oryza
sativa Indica Group" [GO:0009536 "plastid" evidence=IC]
InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494 PROSITE:PS01044
PROSITE:PS01045 GO:GO:0009507 GO:GO:0009536 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016117 GO:GO:0016767
EMBL:AY445521 ProteinModelPortal:Q6ED64 STRING:Q6ED64
Gramene:Q6ED64 Uniprot:Q6ED64
Length = 421
Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
Identities = 199/284 (70%), Positives = 238/284 (83%)
Query: 92 LEEAYERCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVV 151
L++AY RC IC EYAKTFYLGT+LMTE+R++AIWAIYVWCRRTDELVDGPNA+++
Sbjct: 126 LKQAYHRCGEICEEYAKTFYLGTMLMTEDRRRAIWAIYVWCRRTDELVDGPNASHITPSA 185
Query: 152 LDRWEERLQDIFYGRPYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQEL 211
LDRWE+RL D+F GRPYDMLDAAL+DT+ K P+DI+PFRDMIEGMR D RK RY++F EL
Sbjct: 186 LDRWEKRLDDLFTGRPYDMLDAALSDTISKSPIDIQPFRDMIEGMRSDLRKTRYKNFDEL 245
Query: 212 YLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGR 271
Y+YCYYVAGTVGLMSVPVMGIAP+S ++ +S+Y+ AL LG+ NQLTNILRDVGEDA RGR
Sbjct: 246 YMYCYYVAGTVGLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGR 305
Query: 272 VYLPQDELAQFGLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPV 331
+YLPQDELA+ GL D+D+F VT+ WR FMK QIKRAR FF AE G ++L + SRWPV
Sbjct: 306 IYLPQDELAEAGLSDEDIFNGVVTNKWRSFMKRQIKRARMFFEEAERGVTELSQASRWPV 365
Query: 332 WSSLLIYREILDAIEENDYDNLTKRAYVGRMKKFLMLPQAYNRA 375
W+SLL+YR+ILD IE NDY+N TKR YVG+ KK L LP AY R+
Sbjct: 366 WASLLLYRQILDEIEANDYNNFTKRTYVGKAKKLLALPVAYGRS 409
>TAIR|locus:2167225 [details] [associations]
symbol:PSY "PHYTOENE SYNTHASE" species:3702 "Arabidopsis
thaliana" [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016765 "transferase
activity, transferring alkyl or aryl (other than methyl) groups"
evidence=IEA] [GO:0016117 "carotenoid biosynthetic process"
evidence=RCA;IMP] [GO:0016767 "geranylgeranyl-diphosphate
geranylgeranyltransferase activity" evidence=ISS;TAS] [GO:0046905
"phytoene synthase activity" evidence=TAS] [GO:0006636 "unsaturated
fatty acid biosynthetic process" evidence=RCA] [GO:0006655
"phosphatidylglycerol biosynthetic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0010287
"plastoglobule" evidence=IDA] InterPro:IPR002060 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 EMBL:CP002688
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0010287
GO:GO:0016117 GO:GO:0016767 GO:GO:0046905 IPI:IPI00938978
RefSeq:NP_001154715.1 UniGene:At.23726 ProteinModelPortal:F4KGX7
SMR:F4KGX7 PRIDE:F4KGX7 EnsemblPlants:AT5G17230.3 GeneID:831587
KEGG:ath:AT5G17230 KO:K02291 OMA:ELKLYCY Uniprot:F4KGX7
Length = 437
Score = 1083 (386.3 bits), Expect = 1.3e-109, P = 1.3e-109
Identities = 205/302 (67%), Positives = 242/302 (80%)
Query: 92 LEEAYERCRNICAEYAKTFYLGTLLMTEERQKAIWAIYV---------------WCRRTD 136
L EAY+RC +CAEYAKTFYLGTLLMT ER+KAIWAIYV WCRRTD
Sbjct: 128 LGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLKVDFYKQSIVALVWCRRTD 187
Query: 137 ELVDGPNATYMGSVVLDRWEERLQDIFYGRPYDMLDAALTDTVFKFPLDIKPFRDMIEGM 196
ELVDGPNA+++ + LDRWE RL+D+F GRP+DMLDAAL DTV ++P+DI+PFRDMIEGM
Sbjct: 188 ELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARYPVDIQPFRDMIEGM 247
Query: 197 RMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQL 256
RMD +K RY++F +LYLYCYYVAGTVGLMSVPVMGI P S ++ +S+YN AL LG+ NQL
Sbjct: 248 RMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQL 307
Query: 257 TNILRDVGEDASRGRVYLPQDELAQFGLCDKDVFARKVTDNWREFMKEQIKRARTFFNMA 316
TNILRDVGEDA RGRVYLPQDELAQ GL D+D+FA KVTD WR FMK Q+KRAR FF+ A
Sbjct: 308 TNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEA 367
Query: 317 EEGASQLDKDSRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKFLMLPQAYNRAQ 376
E+G ++L SRWPVW+SLL+YR ILD IE NDY+N TKRAYVG++KK LP AY ++
Sbjct: 368 EKGVTELSAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKVKKIAALPLAYAKSV 427
Query: 377 SK 378
K
Sbjct: 428 LK 429
>UNIPROTKB|P37295 [details] [associations]
symbol:al-2 "Bifunctional lycopene cyclase/phytoene
synthase" species:367110 "Neurospora crassa OR74A" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 EMBL:AABX02000002 GO:GO:0045436 TIGRFAMs:TIGR03462
eggNOG:COG1562 GO:GO:0016767 GO:GO:0046905 EMBL:L27652
EMBL:BX842641 PIR:A53583 RefSeq:XP_965725.2 UniGene:Ncr.25908
ProteinModelPortal:P37295 STRING:P37295
EnsemblFungi:EFNCRT00000000733 GeneID:3881954 KEGG:ncr:NCU00585
OrthoDB:EOG4HQHST BioCyc:MetaCyc:MONOMER-16129 Uniprot:P37295
Length = 602
Score = 146 (56.5 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 49/177 (27%), Positives = 81/177 (45%)
Query: 187 KPFRDMIEGMRMDTR------------KFRYEDFQELYLYCYYVAGTVGLMSVPVM--GI 232
KP D+I+G MD++ ++ D ++L Y YVAGTVG + + ++
Sbjct: 394 KPLYDLIKGFEMDSQFTFHGTSDSTDLQYPIADDKDLENYAIYVAGTVGELCIALIIYHC 453
Query: 233 APD-SSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDVFA 291
PD S + + + A +G+ Q NI RD+ DA GRVYLP L + GL K V
Sbjct: 454 LPDMSDTQKRELETAACRMGIALQYVNIARDIVVDARIGRVYLPTTWLKKEGLTHKMVLE 513
Query: 292 RKVTDNWREFMKEQI-KRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEE 347
E M+ ++ + A + A ++ ++R P+ ++ Y I + E
Sbjct: 514 NPEGPEVIERMRRRLLENAFELYGGARPEMQRIPSEARGPMIGAVENYMAIGRVLRE 570
Score = 62 (26.9 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 92 LEEAYERCRNICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVD 140
L EA ER R +++FYL L + + + +Y +CR D+LVD
Sbjct: 284 LREAVERLRL----KSRSFYLANSLFSGRLRIDLILLYSFCRLADDLVD 328
Score = 42 (19.8 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 164 YGRPYDMLDAALTDTVFKFPLD-IKPFRDMIEGMRMDTRKF 203
Y + +L + L +T ++ L+ I+ R+ +E +R+ +R F
Sbjct: 259 YPTTHMLLQSRLINTS-RYDLERIEGLREAVERLRLKSRSF 298
>UNIPROTKB|Q9UUQ6 [details] [associations]
symbol:CARRP "Bifunctional lycopene cyclase/phytoene
synthase" species:29924 "Mucor circinelloides f. lusitanicus"
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0016117
"carotenoid biosynthetic process" evidence=IDA] [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0045436 "lycopene
beta cyclase activity" evidence=IDA] [GO:0046905 "phytoene synthase
activity" evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01044 PROSITE:PS01045 GO:GO:0016021
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872
GO:GO:0016117 GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767
GO:GO:0046905 EMBL:AJ250827 ProteinModelPortal:Q9UUQ6
Uniprot:Q9UUQ6
Length = 614
Score = 143 (55.4 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 53/214 (24%), Positives = 97/214 (45%)
Query: 167 PYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMS 226
P + A + T + L+ +++++G + D + D ++L Y VA +VG M
Sbjct: 377 PASCISAFKSFTRLRHVLEAGAIKELLDGYKWDLERRSIRDQEDLRYYSACVASSVGEMC 436
Query: 227 VPVMGIAPDSSSSAQS---IYNGALNLGVGNQLTNILRDVGEDASR-GRVYLPQDELAQF 282
++ D +S Q I A +G+ Q TNI RD+ D+ GR YLPQD L +
Sbjct: 437 TRIILAHADKPASRQQTQWIIQRAREMGLVLQYTNIARDIVTDSEELGRCYLPQDWLTEK 496
Query: 283 GLC-DKDVFARKVTDNWREFMKEQ-IKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYRE 340
+ + AR++ + + + I +A +A +G +L + V ++ +Y
Sbjct: 497 EVALIQGGLAREIGEERLLSLSHRLIYQADELMVVANKGIDKLPSHCQGGVRAACNVYAS 556
Query: 341 ILDAIEENDYDNLTKRAYVGRMKKF-LMLPQAYN 373
I ++ + + RA+VG K+ + L YN
Sbjct: 557 IGTKLKSYKH-HYPSRAHVGNSKRVEIALLSVYN 589
Score = 64 (27.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 101 NICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVD 140
+I + +K+FY + + + ++ + +Y +CR TD+L D
Sbjct: 294 DILRKASKSFYTASAVFPGDVRQELGVLYAFCRATDDLCD 333
>UNIPROTKB|Q8X0Z1 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:5127 "Fusarium fujikuroi" [GO:0016120 "carotene
biosynthetic process" evidence=IMP] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IMP] [GO:0045436 "lycopene beta cyclase activity"
evidence=IMP] [GO:0046905 "phytoene synthase activity"
evidence=IMP] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ426417 ProteinModelPortal:Q8X0Z1 Uniprot:Q8X0Z1
Length = 612
Score = 145 (56.1 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 57/227 (25%), Positives = 98/227 (43%)
Query: 157 ERLQDIFYGRPYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDT---RK---FRYEDFQE 210
+RL++ +M AL + L +P D+++G D RK F E ++
Sbjct: 387 QRLREYVTSSIPEMFHMALLQLPTYY-LPKQPLDDLLKGFDTDLLFDRKSGAFPIETTED 445
Query: 211 LYLYCYYVAGTVG-LMSVPVMGIAPDS--SSSAQSIYNGALNLGVGNQLTNILRDVGEDA 267
L +Y VAGTV L + ++ P++ + + +G+ Q NI RD+ DA
Sbjct: 446 LDIYGSRVAGTVAELCNHLILYHTPEAVPEDIQREVVASGQEMGIALQYVNIARDIKTDA 505
Query: 268 SRGRVYLPQDELAQFGLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDS 327
RVYLP L + L +DV + + + RA +NMA+ +L +
Sbjct: 506 EIDRVYLPLSWLKEAQLTPEDVIQQPHGPTIEALRHKLLDRAFEKYNMAKGAIDKLPSEG 565
Query: 328 RWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKFLMLPQAYNR 374
+ P+ ++ Y EI + E RA V +M++ + A N+
Sbjct: 566 KGPIRVAVESYMEIGRVLREKGPTMKKGRATVPKMRRIRVAWSALNK 612
Score = 51 (23.0 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 107 AKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVD 140
+++FYL + + + +Y +CR D+LVD
Sbjct: 322 SRSFYLASGTFEGRLRIDLIRLYAFCRAADDLVD 355
Score = 45 (20.9 bits), Expect = 1.9e-08, Sum P(3) = 1.9e-08
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 83 SKPQFHPMFLEE 94
SKP FHP++L +
Sbjct: 130 SKPTFHPIYLSK 141
>UNIPROTKB|Q67GH9 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:4850 "Blakeslea trispora" [GO:0016120 "carotene
biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 EMBL:AY176662 EMBL:AY176663
EMBL:AY884174 ProteinModelPortal:Q67GH9 GO:GO:0016767 GO:GO:0046905
Uniprot:Q67GH9
Length = 608
Score = 136 (52.9 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 56/232 (24%), Positives = 101/232 (43%)
Query: 150 VVLDRWEERLQDIFYGRPYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQ 209
+V+D WE + P + A T + L++ P ++++G + D + D Q
Sbjct: 365 IVID-WELYQNQL----PASCISAFRAFTRLRHVLEVDPVEELLDGYKWDLERRPILDEQ 419
Query: 210 ELYLYCYYVAGTVGLMSVPVMGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASR 269
+L Y VA +VG M V+ +A D + I + A +G+ Q NI RD+ D+
Sbjct: 420 DLEAYSACVASSVGEMCTRVI-LAQDQKENDAWIIDRAREMGLVLQYVNIARDIVTDSET 478
Query: 270 -GRVYLPQDELAQFGLCD-KDVFARKVTDNWREFMK-EQIKRARTFFNMAEEGASQLDKD 326
GR YLPQ L + + AR + D + + + +A A++G +L +
Sbjct: 479 LGRCYLPQQWLRKEETEQIQQGNARSLGDQRLLGLSLKLVGKADAIMVRAKKGIDKLPAN 538
Query: 327 SRWPVWSSLLIYREILDAIEENDYDNLTKRAYVGRMKKFLMLPQAYNRAQSK 378
+ V ++ +Y I +++ T+ G + + L YN QS+
Sbjct: 539 CQGGVRAACQVYAAIGSVLKQQKTTYPTRAHLKGSERAKIALLSVYNLYQSE 590
Score = 63 (27.2 bits), Expect = 6.1e-08, Sum P(2) = 6.1e-08
Identities = 15/64 (23%), Positives = 33/64 (51%)
Query: 101 NICAEYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSV-VLDRWEERL 159
+I + +K+FY + + ++ + +Y +CR TD+L D + + LD + +
Sbjct: 294 DILRKASKSFYTASAVFPSYVRQDLGVLYAFCRATDDLCDDESKSVQERRDQLDLTRQFV 353
Query: 160 QDIF 163
+D+F
Sbjct: 354 RDLF 357
>UNIPROTKB|Q7Z859 [details] [associations]
symbol:crtYB "Bifunctional lycopene cyclase/phytoene
synthase" species:5421 "Xanthophyllomyces dendrorhous" [GO:0016120
"carotene biosynthetic process" evidence=IDA] [GO:0016767
"geranylgeranyl-diphosphate geranylgeranyltransferase activity"
evidence=IDA] [GO:0045436 "lycopene beta cyclase activity"
evidence=IDA] [GO:0046905 "phytoene synthase activity"
evidence=IDA] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ133646 EMBL:AY174117 EMBL:AY177204 EMBL:DQ016503
ProteinModelPortal:Q7Z859 BioCyc:MetaCyc:MONOMER-17247
Uniprot:Q7Z859
Length = 673
Score = 114 (45.2 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 53/202 (26%), Positives = 85/202 (42%)
Query: 173 AALTDTVFKFPLD--IKPFR-DMIEGMRMDT---RKFRYEDFQELYLYCYYVAGTVGLMS 226
A L + ++PLD ++ + D+I + + RK E +L Y VAG+V +
Sbjct: 428 AKLQGLIPRYPLDELLRGYTTDLIFPLSTEAVQARKTPIETTADLLDYGLCVAGSVAELL 487
Query: 227 VPVMGIAPDSSSSA-----QSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQ 281
V V + S A +++ + +G QL NI RD+ DA+ GR YLP L+
Sbjct: 488 VYVSWASAPSQVPATIEEREAVLVASREMGTALQLVNIARDIKGDATEGRFYLP---LSF 544
Query: 282 FGLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSR--WPVWS-SLLIY 338
FGL D+ A + +W E + + + + +S + R W +S L+ Y
Sbjct: 545 FGLRDESKLA--IPTDWTEPRPQDFDKLLSLSPSSTLPSSNASESFRFEWKTYSLPLVAY 602
Query: 339 REILDAIEENDYDNLTKRAYVG 360
E L D L G
Sbjct: 603 AEDLAKHSYKGIDRLPTEVQAG 624
Score = 79 (32.9 bits), Expect = 4.9e-07, Sum P(2) = 4.9e-07
Identities = 19/80 (23%), Positives = 39/80 (48%)
Query: 105 EYAKTFYLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFY 164
E +++F++ + E ++ + +Y +CR TD+L+D P + +D + L + +
Sbjct: 307 EKSRSFFVASAGFPSEVRERLVGLYAFCRVTDDLIDSPEVSSNPHATIDMVSDFLT-LLF 365
Query: 165 GRPYDMLDAALTDTVFKFPL 184
G P L + D + PL
Sbjct: 366 GPP---LHPSQPDKILSSPL 382
>UNIPROTKB|Q60AN4 [details] [associations]
symbol:sqs "Squalene synthase" species:243233
"Methylococcus capsulatus str. Bath" [GO:0004310
"farnesyl-diphosphate farnesyltransferase activity" evidence=ISS]
[GO:0019745 "pentacyclic triterpenoid biosynthetic process"
evidence=ISS] InterPro:IPR002060 InterPro:IPR019845 Pfam:PF00494
PROSITE:PS01044 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0019745 EMBL:AE017282
GenomeReviews:AE017282_GR KO:K00801 OMA:ELEEYCW GO:GO:0004310
RefSeq:YP_113313.1 ProteinModelPortal:Q60AN4 GeneID:3102259
KEGG:mca:MCA0813 PATRIC:22605424 HOGENOM:HOG000230420
ProtClustDB:CLSK644100 Uniprot:Q60AN4
Length = 362
Score = 142 (55.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 34/95 (35%), Positives = 53/95 (55%)
Query: 190 RDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPVM-GIAPDSSSSAQSIYNGAL 248
R M E D R ED +++ YCYYVAG VG M + +P+ ++ + A+
Sbjct: 141 RGMAEFQDKDLRH-GLEDLRQMGDYCYYVAGVVGEMLTRLFCHYSPEIAAHRSRLMELAV 199
Query: 249 NLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFG 283
+ G G Q+TNIL+D+ +D +RG +LPQ+ + G
Sbjct: 200 SFGQGLQMTNILKDLWDDHARGVCWLPQEVFTECG 234
>MGI|MGI:1924197 [details] [associations]
symbol:Ndufaf6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0009058 "biosynthetic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=ISO]
InterPro:IPR002060 Pfam:PF00494 MGI:MGI:1924197 GO:GO:0005739
GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10 InterPro:IPR008949
SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981 eggNOG:COG1562
CTD:137682 GeneTree:ENSGT00510000048688 HOGENOM:HOG000146031
HOVERGEN:HBG080309 OMA:FDLYNDP OrthoDB:EOG4TQM9N EMBL:AL732497
IPI:IPI00341302 RefSeq:NP_001078962.1 UniGene:Mm.275265
ProteinModelPortal:A2AIL4 STRING:A2AIL4 PhosphoSite:A2AIL4
PaxDb:A2AIL4 PRIDE:A2AIL4 Ensembl:ENSMUST00000058183 GeneID:76947
KEGG:mmu:76947 UCSC:uc008ryx.1 InParanoid:A2AIL4 NextBio:346147
Bgee:A2AIL4 Genevestigator:A2AIL4 Uniprot:A2AIL4
Length = 333
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 49/242 (20%), Positives = 101/242 (41%)
Query: 111 YLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRP-YD 169
YL +LL E Q++ A+ + ++ D + +G + + W++ ++D++ P +
Sbjct: 73 YLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWKKAVEDMYCDNPPHQ 132
Query: 170 MLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPV 229
+ L V K L + +I+ + Y QEL Y G++ +++ V
Sbjct: 133 PVAIELWKAVKKHNLTKRWLMRIIDEREKNLDDKAYRSMQELENYAENTQGSLLYLTLEV 192
Query: 230 MGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDV 289
+G+ + A S ++G + LR +SR +V+LP D Q G+ +D
Sbjct: 193 LGVKDLHADHAAS------HIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDF 246
Query: 290 FARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEND 349
R N R+ + + +A A + ++ +P + + + L I+ D
Sbjct: 247 LRRNQDKNVRDVVYDIASQAHLHLKHARSFHRSVPAEA-FPAFLQTVSLEDYLKKIQRVD 305
Query: 350 YD 351
+D
Sbjct: 306 FD 307
>UNIPROTKB|Q9P854 [details] [associations]
symbol:carRA "Bifunctional lycopene cyclase/phytoene
synthase" species:763407 "Phycomyces blakesleeanus NRRL 1555(-)"
[GO:0016120 "carotene biosynthetic process" evidence=IMP]
[GO:0016767 "geranylgeranyl-diphosphate geranylgeranyltransferase
activity" evidence=IMP] [GO:0045436 "lycopene beta cyclase
activity" evidence=IMP] [GO:0046905 "phytoene synthase activity"
evidence=IMP] UniPathway:UPA00799 UniPathway:UPA00802
InterPro:IPR002060 InterPro:IPR017825 InterPro:IPR019845
Pfam:PF00494 PROSITE:PS01045 GO:GO:0016021 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016872 GO:GO:0016117
GO:GO:0045436 TIGRFAMs:TIGR03462 GO:GO:0016767 GO:GO:0046905
EMBL:AJ278287 EMBL:AJ276965 ProteinModelPortal:Q9P854
Uniprot:Q9P854
Length = 602
Score = 133 (51.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 54/203 (26%), Positives = 91/203 (44%)
Query: 167 PYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMS 226
P + A + T + L+IK ++++G D + ++ +L Y VA +VG M
Sbjct: 371 PDSFIAAFRSFTRLRDVLEIKAVEELLDGYTFDLEQREVKNEDDLVYYSACVASSVGEMC 430
Query: 227 VPV-MGIAPDSSSSAQS-IYNGALNLGVGNQLTNILRDVGEDASR-GRVYLPQDEL-AQF 282
V M P + + A ++G+ QLTNI RD+ D+ + GR Y+P+D L +Q
Sbjct: 431 TRVLMASEPGGNRTMLKWTVERARDMGLALQLTNIARDIVTDSKQLGRSYVPRDWLTSQE 490
Query: 283 GLCDKDVFARKVTDN-WREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREI 341
K AR++ D R+ + + A MA L SR V ++ +Y I
Sbjct: 491 SALLKAGKARELGDERLRQIALKMVYTADDLNLMASRAIDYLPPSSRCGVRAACNVYTAI 550
Query: 342 LDAIEE-NDYDNLTKRAYVGRMK 363
++ + N Y + + RMK
Sbjct: 551 GVSLHKANGYPDRAHLTKLERMK 573
>RGD|1309085 [details] [associations]
symbol:Ndufaf6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0032981 "mitochondrial respiratory
chain complex I assembly" evidence=ISO;ISS] InterPro:IPR002060
Pfam:PF00494 RGD:1309085 GO:GO:0009058 GO:GO:0005743
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
GO:GO:0032981 EMBL:CH473984 CTD:137682 GeneTree:ENSGT00510000048688
OrthoDB:EOG4TQM9N EMBL:AABR03042038 EMBL:AABR03046646
IPI:IPI00366609 RefSeq:XP_001072347.1 RefSeq:XP_232684.3
UniGene:Rn.94436 PRIDE:D3ZN43 Ensembl:ENSRNOT00000061569
GeneID:297821 KEGG:rno:297821 UCSC:RGD:1309085 NextBio:642708
Uniprot:D3ZN43
Length = 333
Score = 127 (49.8 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 48/242 (19%), Positives = 101/242 (41%)
Query: 111 YLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRP-YD 169
YL +LL E Q++ A+ + ++ D + +G + + W + ++D+F P +
Sbjct: 73 YLCSLLFPAECQRSASALRAFNVELAQVKDSVSEKTIGLMRMQFWRKAVEDMFCDNPPHQ 132
Query: 170 MLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPV 229
+ L V + L + +I+ + Y +EL Y ++ +++ V
Sbjct: 133 PVAMELWKAVKRHNLTKRWLLRIIDEREKNLDDKAYRSIRELETYAENTQSSLLYLTLEV 192
Query: 230 MGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDV 289
+G+ + A S ++G + LR +SR +V+LP D Q G+ +D
Sbjct: 193 LGVKDVHADHAAS------HIGKAQGIVTCLRATPYHSSRRQVFLPMDVCVQHGVSQEDF 246
Query: 290 FARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEND 349
R N R+ + + +A A S++ ++ +P + + + L I+ D
Sbjct: 247 LRRNQDKNVRDVVYDIASQAHLHLKHARSFHSRVPAEA-FPAFLQTVSLEDYLKKIQRVD 305
Query: 350 YD 351
+D
Sbjct: 306 FD 307
>UNIPROTKB|A7YVD7 [details] [associations]
symbol:NDUFAF6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:9913 "Bos taurus" [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002060
Pfam:PF00494 GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981
eggNOG:COG1562 EMBL:BC123431 IPI:IPI00696259 RefSeq:NP_001098859.1
UniGene:Bt.14664 ProteinModelPortal:A7YVD7 STRING:A7YVD7
Ensembl:ENSBTAT00000009959 GeneID:523017 KEGG:bta:523017 CTD:137682
GeneTree:ENSGT00510000048688 HOGENOM:HOG000146031
HOVERGEN:HBG080309 InParanoid:A7YVD7 OMA:FDLYNDP OrthoDB:EOG4TQM9N
NextBio:20873646 Uniprot:A7YVD7
Length = 333
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 50/243 (20%), Positives = 102/243 (41%)
Query: 111 YLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRP-YD 169
YL +LL+ E + + +A+ + ++ D + +G + + W++ + DI+ P +
Sbjct: 73 YLCSLLLPAESRSSAFALRAFNVELAQIKDSVSEKTIGLMRMQFWKKTVDDIYSDNPPHQ 132
Query: 170 MLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPV 229
+ L V + L + +I+ + Y + QEL Y ++ +++ +
Sbjct: 133 PVAIELWKAVRRHNLTKRWLMKIIDEREKNLDDKAYRNIQELENYAENTQSSLLYLTLEI 192
Query: 230 MGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDV 289
+GI + A S ++G + LR SR RV+LP D G+ +D
Sbjct: 193 LGIKDLHADHAAS------HIGKAQGIVTCLRATPYHGSRRRVFLPMDICMLHGVSQED- 245
Query: 290 FARKVTD-NWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEN 348
F RK D N R+ + + +A A + + +P + + + L I++
Sbjct: 246 FLRKSQDRNVRDVVYDVASQAHLHLKHARSFHRSIPVKA-FPAFLQTVALEDYLKKIQQV 304
Query: 349 DYD 351
D+D
Sbjct: 305 DFD 307
>WB|WBGene00007145 [details] [associations]
symbol:B0334.5 species:6239 "Caenorhabditis elegans"
[GO:0009058 "biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] InterPro:IPR002060
Pfam:PF00494 GO:GO:0040010 GO:GO:0009058 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 EMBL:Z66519
GeneTree:ENSGT00510000048688 RefSeq:NP_496458.3
ProteinModelPortal:Q17477 PaxDb:Q17477 EnsemblMetazoa:B0334.5
GeneID:174761 KEGG:cel:CELE_B0334.5 UCSC:B0334.5 CTD:174761
WormBase:B0334.5 eggNOG:NOG258124 HOGENOM:HOG000199533
InParanoid:Q17477 OMA:LEMVRKH NextBio:885390 Uniprot:Q17477
Length = 420
Score = 124 (48.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 55/267 (20%), Positives = 108/267 (40%)
Query: 93 EEAYERCRNICAEYAKTFYLGTLLMTEERQK---AIWAIYVWCRRTDELVDGPNATYMGS 149
+EA+ C + ++ YL L + + Q A+ A+ V + VD
Sbjct: 131 DEAFRSCLEMVRKHDIDSYLAILTINKRAQPEIVALNALNVELASIRDKVDTRKGDASAM 190
Query: 150 VVLDRWEERLQDIFYGRPYDMLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYED-- 207
L W++ + I+ P + + + F DM+ + ++TR+ D
Sbjct: 191 YRLQFWKDAISSIYGISPLPVPRQPVAIALCSFAAGANS--DMLLKL-VETRQSTIGDRQ 247
Query: 208 FQELYLYCYYVAGTVG-LMSVPVMGIAPDSSSSA--QSIYNGALNLGVGNQLTNILRDVG 264
F ++ C Y T+G L+ + + +A +S + Y+ A +LG + N++R
Sbjct: 248 FSDINALCEYGKSTIGSLLCLQIDALARNSPETKVLPMAYDVAKDLGAAYAIANMIRATH 307
Query: 265 EDASRGRVYLPQDELAQFGLCDKDVFARKVTDNWREFMKEQIKRARTFFNMAEEGASQLD 324
+RG V LP D ++ G ++ +K D K+ + ++ A +
Sbjct: 308 PLLARGIVLLPADVMSLNGATPDSLYKKKKLDEMVGMTKDLVNESKRLLIDARSPIEMVP 367
Query: 325 KDSRWPVWSSLLIYREILDAIEENDYD 351
K R + ++ I+ IE+N+YD
Sbjct: 368 KAVRPALAATGATTDYIIKTIEKNNYD 394
>UNIPROTKB|Q330K2 [details] [associations]
symbol:NDUFAF6 "NADH dehydrogenase (ubiquinone) complex I,
assembly factor 6" species:9606 "Homo sapiens" [GO:0009058
"biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0032981 "mitochondrial respiratory chain complex I assembly"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002060 Pfam:PF00494 GO:GO:0005634 GO:GO:0005737
EMBL:CH471060 GO:GO:0009058 GO:GO:0005743 Gene3D:1.10.600.10
InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740 GO:GO:0032981
Orphanet:255241 eggNOG:COG1562 MIM:252010 CTD:137682
HOGENOM:HOG000146031 HOVERGEN:HBG080309 OMA:FDLYNDP EMBL:AY444560
EMBL:AC087752 EMBL:BC028166 EMBL:AK298631 IPI:IPI00847930
IPI:IPI00852983 IPI:IPI00889748 RefSeq:NP_689629.2
UniGene:Hs.729144 ProteinModelPortal:Q330K2 STRING:Q330K2
PhosphoSite:Q330K2 DMDM:182676420 PaxDb:Q330K2 PRIDE:Q330K2
DNASU:137682 Ensembl:ENST00000396111 Ensembl:ENST00000396113
Ensembl:ENST00000396124 Ensembl:ENST00000518258
Ensembl:ENST00000523337 Ensembl:ENST00000542894 GeneID:137682
KEGG:hsa:137682 UCSC:uc003yhi.3 UCSC:uc003yhj.3
GeneCards:GC08P095909 HGNC:HGNC:28625 HPA:HPA047148 HPA:HPA050545
MIM:612392 neXtProt:NX_Q330K2 PharmGKB:PA142672357
InParanoid:Q330K2 GenomeRNAi:137682 NextBio:83659
ArrayExpress:Q330K2 Bgee:Q330K2 CleanEx:HS_C8orf38
Genevestigator:Q330K2 Uniprot:Q330K2
Length = 333
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 44/242 (18%), Positives = 100/242 (41%)
Query: 111 YLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRP-YD 169
YL +LL+ E + +++A+ + ++ D + +G + + W++ ++DI+ P +
Sbjct: 73 YLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIYCDNPPHQ 132
Query: 170 MLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPV 229
+ L V + L + +++ + Y + +EL Y ++ +++ +
Sbjct: 133 PVAIELWKAVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEI 192
Query: 230 MGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDV 289
+GI + A S ++G + LR SR +V+LP D G+ +D
Sbjct: 193 LGIKDLHADHAAS------HIGKAQGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDF 246
Query: 290 FARKVTDNWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEND 349
R N R+ + + +A A + + +P + + + L I+ D
Sbjct: 247 LRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTVPVKA-FPAFLQTVSLEDFLKKIQRVD 305
Query: 350 YD 351
+D
Sbjct: 306 FD 307
>ZFIN|ZDB-GENE-100112-1 [details] [associations]
symbol:ndufaf6 "NADH dehydrogenase (ubiquinone)
complex I, assembly factor 6" species:7955 "Danio rerio"
[GO:0016740 "transferase activity" evidence=IEA] [GO:0009058
"biosynthetic process" evidence=IEA] InterPro:IPR002060
Pfam:PF00494 ZFIN:ZDB-GENE-100112-1 GO:GO:0009058
Gene3D:1.10.600.10 InterPro:IPR008949 SUPFAM:SSF48576 GO:GO:0016740
eggNOG:COG1562 HOGENOM:HOG000146031 HOVERGEN:HBG080309
OrthoDB:EOG4TQM9N EMBL:BC097249 IPI:IPI00497865 UniGene:Dr.7072
STRING:Q4V8Q6 InParanoid:Q4V8Q6 ArrayExpress:Q4V8Q6 Bgee:Q4V8Q6
Uniprot:Q4V8Q6
Length = 344
Score = 115 (45.5 bits), Expect = 0.00060, P = 0.00060
Identities = 49/243 (20%), Positives = 99/243 (40%)
Query: 111 YLGTLLMTEERQKAIWAIYVWCRRTDELVDGPNATYMGSVVLDRWEERLQDIFYGRP-YD 169
+L +LL+ E +++ A+ + ++ D + +G + + W+ ++DI+ P
Sbjct: 84 FLCSLLLPEAARRSALALRAFNVELAQIKDSVSHKTIGLMRMQFWKSAVEDIYRDDPPAQ 143
Query: 170 MLDAALTDTVFKFPLDIKPFRDMIEGMRMDTRKFRYEDFQELYLYCYYVAGTVGLMSVPV 229
+ A L V K L + ++ D Y + Q+L Y ++ + +
Sbjct: 144 PVSAELWRAVRKHTLTRRWMLRIVSEREKDMEDRAYRNLQDLEAYGENTQSSLLYLLLET 203
Query: 230 MGIAPDSSSSAQSIYNGALNLGVGNQLTNILRDVGEDASRGRVYLPQDELAQFGLCDKDV 289
+G+ + A S ++G + LR ++SR +VYLP D G +D
Sbjct: 204 LGVKNVHADHAAS------HIGKAQGILTCLRATPFNSSRRKVYLPMDICMLHGASQED- 256
Query: 290 FARKVTD-NWREFMKEQIKRARTFFNMAEEGASQLDKDSRWPVWSSLLIYREILDAIEEN 348
F R D N R+ + + +A A A + S P + ++ + L + +
Sbjct: 257 FIRGSRDQNVRDVVYDIASQAHVHLQHARSFAESVPH-SAMPAFLQTVVLEDYLQRVRKV 315
Query: 349 DYD 351
D+D
Sbjct: 316 DFD 318
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 378 378 0.00089 117 3 11 22 0.50 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 617 (66 KB)
Total size of DFA: 259 KB (2138 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.80u 0.11s 31.91t Elapsed: 00:00:01
Total cpu time: 31.81u 0.11s 31.92t Elapsed: 00:00:01
Start: Sat May 11 13:01:11 2013 End: Sat May 11 13:01:12 2013