BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036381
(235 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2B5F|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An
Open Conformation To 3.9 Resolution
pdb|2B5F|B Chain B, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An
Open Conformation To 3.9 Resolution
pdb|2B5F|C Chain C, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An
Open Conformation To 3.9 Resolution
pdb|2B5F|D Chain D, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In An
Open Conformation To 3.9 Resolution
Length = 303
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 2 WRASLTEVLGTALLVF---------ALDTIVISSIQTDTI-------IAILLLATFPISG 45
WRA++ E + T L ++ + +T+V S+ I I +L+ T ISG
Sbjct: 38 WRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISG 97
Query: 46 GHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLI 105
GHINP VTF L +++ RA +Y++AQC+G + G KA + F G +
Sbjct: 98 GHINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAFMKGPYNQ-FGGGANS-- 154
Query: 106 VVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXXXX 165
V LG + G AL EI +FV ++ +++ A D +++ + V +
Sbjct: 155 ---------VALGYNKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPILAPLPIGF 204
Query: 166 XXXXFVSTTVTAQKGYGGAGRNPARCLGPAFV-RGGHLWDRHWVFWAGPATACVAFALYI 224
T+ G G NPAR G A + +WD W+FW GP A Y
Sbjct: 205 AVFMVHLATIPIT----GTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYH 260
Query: 225 KLI 227
+ +
Sbjct: 261 QYV 263
>pdb|3CN6|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e
Mutant
pdb|3CN6|B Chain B, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S274e
Mutant
Length = 304
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 2 WRASLTEVLGTALLVF---------ALDTIVISSIQTDTI-------IAILLLATFPISG 45
WRA++ E + T L ++ + +T+V S+ I I +L+ T ISG
Sbjct: 61 WRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISG 120
Query: 46 GHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLI 105
GHINP VTF L +++ RA +Y++AQC+G + G KA + F G +
Sbjct: 121 GHINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAFMKGPYNQ-FGGGANS-- 177
Query: 106 VVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXXXX 165
V LG + G AL EI +FV ++ +++ A D +++ + V +
Sbjct: 178 ---------VALGYNKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPILAPLPIGF 227
Query: 166 XXXXFVSTTVTAQKGYGGAGRNPARCLGPAFV-RGGHLWDRHWVFWAGPATACVAFALYI 224
T+ G G NPAR G A + +WD W+FW GP A Y
Sbjct: 228 AVFMVHLATIPIT----GTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYH 283
Query: 225 KLI 227
+ +
Sbjct: 284 QYV 286
>pdb|1Z98|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A
Closed Conformation
pdb|1Z98|M Chain M, Crystal Structure Of The Spinach Aquaporin Sopip2;1 In A
Closed Conformation
Length = 281
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 34/243 (13%)
Query: 2 WRASLTEVLGTALLVF---------ALDTIVISSIQTDTI-------IAILLLATFPISG 45
WRA++ E + T L ++ + +T+V S+ I I +L+ T ISG
Sbjct: 38 WRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISG 97
Query: 46 GHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLI 105
GHINP VTF L +++ RA +Y++AQC+G + G KA + F G +
Sbjct: 98 GHINPAVTFGLFLARKVSLLRALVYMIAQCLGAICGVGLVKAFMKGPYNQ-FGGGANS-- 154
Query: 106 VVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXXXX 165
V LG + G AL EI +FV ++ +++ A D +++ + V +
Sbjct: 155 ---------VALGYNKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPILAPLPIGF 204
Query: 166 XXXXFVSTTVTAQKGYGGAGRNPARCLGPAFV-RGGHLWDRHWVFWAGPATACVAFALYI 224
T+ G G NPAR G A + +WD W+FW GP A Y
Sbjct: 205 AVFMVHLATIPIT----GTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYH 260
Query: 225 KLI 227
+ +
Sbjct: 261 QYV 263
>pdb|3CN5|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e,
S274e Mutant
Length = 304
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 2 WRASLTEVLGTALLVF---------ALDTIVISSIQTDTI-------IAILLLATFPISG 45
WRA++ E + T L ++ + +T+V S+ I I +L+ T ISG
Sbjct: 61 WRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISG 120
Query: 46 GHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLI 105
GHINP VTF L + + RA +Y++AQC+G + G KA + F G +
Sbjct: 121 GHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQ-FGGGANS-- 177
Query: 106 VVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXXXX 165
V LG + G AL EI +FV ++ +++ A D +++ + V +
Sbjct: 178 ---------VALGYNKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPILAPLPIGF 227
Query: 166 XXXXFVSTTVTAQKGYGGAGRNPARCLGPAFV-RGGHLWDRHWVFWAGPATACVAFALYI 224
T+ G G NPAR G A + +WD W+FW GP A Y
Sbjct: 228 AVFMVHLATIPIT----GTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYH 283
Query: 225 KLI 227
+ +
Sbjct: 284 QYV 286
>pdb|3CLL|A Chain A, Crystal Structure Of The Spinach Aquaporin Sopip2;1 S115e
Mutant
Length = 300
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 106/243 (43%), Gaps = 34/243 (13%)
Query: 2 WRASLTEVLGTALLVF---------ALDTIVISSIQTDTI-------IAILLLATFPISG 45
WRA++ E + T L ++ + +T+V S+ I I +L+ T ISG
Sbjct: 57 WRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISG 116
Query: 46 GHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLI 105
GHINP VTF L + + RA +Y++AQC+G + G KA + F G +
Sbjct: 117 GHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQ-FGGGANS-- 173
Query: 106 VVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXXXX 165
V LG + G AL EI +FV ++ +++ A D +++ + V +
Sbjct: 174 ---------VALGYNKGTALGAEIIGTFVLVY-TVFSATDPKRSARDSHVPILAPLPIGF 223
Query: 166 XXXXFVSTTVTAQKGYGGAGRNPARCLGPAFV-RGGHLWDRHWVFWAGPATACVAFALYI 224
T+ G G NPAR G A + +WD W+FW GP A Y
Sbjct: 224 AVFMVHLATIPIT----GTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAAAYH 279
Query: 225 KLI 227
+ +
Sbjct: 280 QYV 282
>pdb|2ZZ9|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 2.8 A Resolution
By Electron Crystallography
Length = 301
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGA-----LAPKAVVSTKIEHAF 97
ISGGHINP VT + +++ ++ YI AQC+G + GA + P +VV
Sbjct: 69 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV-------- 120
Query: 98 SLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSV 157
GG + V L G L +E+ +F +F +++ + D+++ V++
Sbjct: 121 --GGLGVTTVHGN--------LTAGHGLLVELIITFQLVF-TIFASCDDKRTDVTGSVAL 169
Query: 158 CXXXXXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPAT-A 216
++ Y GA NPAR GPA + G W+ HW++W GP A
Sbjct: 170 AIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGA 219
Query: 217 CVAFALY 223
+A ALY
Sbjct: 220 VLAGALY 226
>pdb|3IYZ|A Chain A, Structure Of Aquaporin-4 S180d Mutant At 10.0 A Resolution
From Electron Micrograph
Length = 340
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGA-----LAPKAVVSTKIEHAF 97
ISGGHINP VT + +++ ++ YI AQC+G + GA + P +VV
Sbjct: 108 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV-------- 159
Query: 98 SLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSV 157
GG + V L G L +E+ +F +F +++ + D+++ V++
Sbjct: 160 --GGLGVTTVHGN--------LTAGHGLLVELIITFQLVF-TIFASCDDKRTDVTGSVAL 208
Query: 158 CXXXXXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPAT-A 216
++ Y GA NPAR GPA + G W+ HW++W GP A
Sbjct: 209 AIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGA 258
Query: 217 CVAFALY 223
+A ALY
Sbjct: 259 VLAGALY 265
>pdb|2D57|A Chain A, Double Layered 2d Crystal Structure Of Aquaporin-4
(Aqp4m23) At 3.2 A Resolution By Electron
Crystallography
Length = 301
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 84/187 (44%), Gaps = 35/187 (18%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGA-----LAPKAVVSTKIEHAF 97
ISGGHINP VT + +++ ++ YI AQC+G + GA + P +VV
Sbjct: 69 ISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVV-------- 120
Query: 98 SLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSV 157
GG + V L G L +E+ +F +F +++ + D ++ V++
Sbjct: 121 --GGLGVTTVHGN--------LTAGHGLLVELIITFQLVF-TIFASCDSKRTDVTGSVAL 169
Query: 158 CXXXXXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPAT-A 216
++ Y GA NPAR GPA + G W+ HW++W GP A
Sbjct: 170 AIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGA 219
Query: 217 CVAFALY 223
+A ALY
Sbjct: 220 VLAGALY 226
>pdb|3GD8|A Chain A, Crystal Structure Of Human Aquaporin 4 At 1.8 And Its
Mechanism Of Conductance
Length = 223
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGA-----LAPKAVVSTKIEHAF 97
ISGGHINP VT + +++ ++ YI AQC+G + GA + P +VV
Sbjct: 60 ISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVV-------- 111
Query: 98 SLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSV 157
GG + +V L G L +E+ +F +F +++ + D ++ +++
Sbjct: 112 --GGLGVTMVHGN--------LTAGHGLLVELIITFQLVF-TIFASCDSKRTDVTGSIAL 160
Query: 158 CXXXXXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATAC 217
++ Y GA NPAR GPA + G W+ HW++W GP
Sbjct: 161 AIGFSVAIGHLFAIN--------YTGASMNPARSFGPAVIMGN--WENHWIYWVGPIIGA 210
Query: 218 V 218
V
Sbjct: 211 V 211
>pdb|2B6O|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0
(Aqp0) (Lens Mip) At 1.9a Resolution, In A Closed Pore
State
Length = 263
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 33 IAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTK 92
+A L+ A ISG H+NP VTF+ + M++ RA Y++AQ +G V GA +V
Sbjct: 52 LATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPA 111
Query: 93 IEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKAL 152
+ +L + G+ G A +EIF + F+ ++ +DER+ L
Sbjct: 112 VRGNLAL-------------NTLHPGVSVGQATIVEIFLTLQFVLC-IFATYDERRNGRL 157
Query: 153 ARVSVCXXXXXXXXXXXFVSTTVTAQKG--YGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V++ S T+ G Y GAG NPAR PA + + HWV+W
Sbjct: 158 GSVALAVG----------FSLTLGHLFGMYYTGAGMNPARSFAPAILTRN--FTNHWVYW 205
Query: 211 AGP 213
GP
Sbjct: 206 VGP 208
>pdb|1SOR|A Chain A, Aquaporin-0 Membrane Junctions Reveal The Structure Of A
Closed Water Pore
Length = 235
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 33 IAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTK 92
+A L+ A ISG H+NP VTF+ + M++ RA Y++AQ +G V GA +V
Sbjct: 48 LATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPA 107
Query: 93 IEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKAL 152
+ +L + G+ G A +EIF + F+ ++ +DER+ L
Sbjct: 108 VRGNLAL-------------NTLHPGVSVGQATIVEIFLTLQFVLC-IFATYDERRNGRL 153
Query: 153 ARVSVCXXXXXXXXXXXFVSTTVTAQKG--YGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V++ S T+ G Y GAG NPAR PA + + HWV+W
Sbjct: 154 GSVALAVG----------FSLTLGHLFGMYYTGAGMNPARSFAPAILTRN--FTNHWVYW 201
Query: 211 AGP 213
GP
Sbjct: 202 VGP 204
>pdb|3M9I|A Chain A, Electron Crystallographic Structure Of Lens Aquaporin-0
(Aqp Mip) In E. Coli Polar Lipids
Length = 220
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 33 IAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTK 92
+A L+ A ISG H+NP VTF+ + M++ RA Y++AQ +G V GA +V
Sbjct: 46 LATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPA 105
Query: 93 IEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKAL 152
+ +L + G+ G A +EIF + F+ ++ +DER+ L
Sbjct: 106 VRGNLAL-------------NTLHPGVSVGQATIVEIFLTLQFVL-CIFATYDERRNGRL 151
Query: 153 ARVSVCXXXXXXXXXXXFVSTTVTAQKG--YGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V++ S T+ G Y GAG NPAR PA + + HWV+W
Sbjct: 152 GSVALAVG----------FSLTLGHLFGMYYTGAGMNPARSFAPAILTRN--FTNHWVYW 199
Query: 211 AGP 213
GP
Sbjct: 200 VGP 202
>pdb|1YMG|A Chain A, The Channel Architecture Of Aquaporin O At 2.2 Angstrom
Resolution
pdb|2B6P|A Chain A, X-Ray Structure Of Lens Aquaporin-0 (Aqp0) (Lens Mip) In
An Open Pore State
pdb|2C32|A Chain A, Co-Axial Association Of Recombinant Eye Lens Aquaporin-0
Observed In Loosely Packed 3d-Crystals
Length = 263
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 28/183 (15%)
Query: 33 IAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTK 92
+A L+ A ISG H+NP VTF+ + M++ RA Y++AQ +G V GA +V
Sbjct: 52 LATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPPA 111
Query: 93 IEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKAL 152
+ +L + G+ G A +EIF + F+ ++ +DER+ L
Sbjct: 112 VRGNLAL-------------NTLHPGVSVGQATIVEIFLTLQFVLC-IFATYDERRNGRL 157
Query: 153 ARVSVCXXXXXXXXXXXFVSTTVTAQKG--YGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V++ S T+ G Y GAG NPAR PA + + HWV+W
Sbjct: 158 GSVALAVG----------FSLTLGHLFGMYYTGAGMNPARSFAPAILTRN--FTNHWVYW 205
Query: 211 AGP 213
GP
Sbjct: 206 VGP 208
>pdb|1FQY|A Chain A, Structure Of Aquaporin-1 At 3.8 A Resolution By Electron
Crystallography
pdb|1IH5|A Chain A, Crystal Structure Of Aquaporin-1
pdb|1H6I|A Chain A, A Refined Structure Of Human Aquaporin 1
Length = 269
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 93/232 (40%), Gaps = 46/232 (19%)
Query: 2 WRASLTEVLGTALLVF------------------ALDTIVISSIQTDTIIAILLLATFPI 43
WRA + E L T L VF A+ V S+ IA L + I
Sbjct: 11 WRAVVAEFLATTLFVFISIGSALGFKYPVGNNQTAVQDNVKVSLAFGLSIATLAQSVGHI 70
Query: 44 SGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAF--SLGG 101
SG H+NP VT L +++ RA +YI+AQCVG A+V+T I SL G
Sbjct: 71 SGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVG---------AIVATAILSGITSSLTG 121
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+L + G+++G L +EI + + +A +R+ + L +
Sbjct: 122 NSL------GRNDLADGVNSGQGLGIEIIGTLQLVLCV--LATTDRRRRDLGGSAPLAIG 173
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGP 213
Y G G NPAR G A + H + HW+FW GP
Sbjct: 174 LSVALGHLLAID-------YTGCGINPARSFGSAVIT--HNFSNHWIFWVGP 216
>pdb|1J4N|A Chain A, Crystal Structure Of The Aqp1 Water Channel
Length = 271
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 44/232 (18%)
Query: 2 WRASLTEVLGTALLVF--------------------ALDTIVISSIQTDTIIAILLLATF 41
WRA + E L L +F A+ V S+ IA L +
Sbjct: 11 WRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVG 70
Query: 42 PISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGG 101
ISG H+NP VT L ++V RA +YI+AQCVG + + S+ +++ L
Sbjct: 71 HISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLGLNA 130
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ G+++G L +EI + + +A +R+ + L
Sbjct: 131 -------------LAPGVNSGQGLGIEIIGTLQLVLCV--LATTDRRRRDLGGSGPLAIG 175
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGP 213
Y G G NPAR G + + H + HW+FW GP
Sbjct: 176 FSVALGHLLAID-------YTGCGINPARSFGSSVIT--HNFQDHWIFWVGP 218
>pdb|3D9S|A Chain A, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure
pdb|3D9S|B Chain B, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure
pdb|3D9S|C Chain C, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure
pdb|3D9S|D Chain D, Human Aquaporin 5 (Aqp5) - High Resolution X-Ray Structure
Length = 266
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 102/247 (41%), Gaps = 55/247 (22%)
Query: 3 RASLTEVLGTALLVF-----------ALDTIVISSIQTDTIIAILLLATFPISGGHINPL 51
+A E L T + VF AL TI+ ++ I L A P+SGGHINP
Sbjct: 13 KAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPA 72
Query: 52 VTFSAALIGHMTVTRAAIYILAQCVGGVFGA--------LAPKAVVSTKIEHAFSLGGRT 103
+T + + +++ RA Y+ AQ VG + GA L + ++ + + G+
Sbjct: 73 ITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNLAVNALNNNTTQGQA 132
Query: 104 LIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXXX 163
++V EL L +AL C +FAS D R+ + ++
Sbjct: 133 MVV---------ELILTFQLAL-----C----IFAST----DSRRTSPVGSPALSIG--- 167
Query: 164 XXXXXXFVSTTVTAQKG--YGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPAT-ACVAF 220
+S T+ G + G NPAR GPA V HWVFW GP A +A
Sbjct: 168 -------LSVTLGHLVGIYFTGCSMNPARSFGPAVVMN-RFSPAHWVFWVGPIVGAVLAA 219
Query: 221 ALYIKLI 227
LY L+
Sbjct: 220 ILYFYLL 226
>pdb|3NE2|A Chain A, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|B Chain B, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|C Chain C, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|D Chain D, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|E Chain E, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|F Chain F, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|G Chain G, Archaeoglobus Fulgidus Aquaporin
pdb|3NE2|H Chain H, Archaeoglobus Fulgidus Aquaporin
Length = 246
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 69/182 (37%), Gaps = 24/182 (13%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGR 102
ISG HINP VT + IG YI+AQ +G G+L A V LG
Sbjct: 77 ISGAHINPAVTIALWSIGRFPGREVVPYIVAQFIGAALGSLLFLACVGPAAATVGGLGAT 136
Query: 103 TLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXX 162
P G+ G A+ E +F+ + M +A DER A + +
Sbjct: 137 A----------PFP-GIGYGQAILTEAIGTFLLMLVIMGVAVDERAPPGFAGLVIGLT-- 183
Query: 163 XXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAF---VRGGHLWDRHWVFWAGPATACVA 219
V +T G+ NPAR GP + G +LW ++ GP VA
Sbjct: 184 --------VGGIITTIGNITGSSLNPARTFGPYLGDSLMGINLWQYFPIYVIGPIVGAVA 235
Query: 220 FA 221
A
Sbjct: 236 AA 237
>pdb|2EVU|A Chain A, Crystal Structure Of Aquaporin Aqpm At 2.3a Resolution
pdb|2F2B|A Chain A, Crystal Structure Of Integral Membrane Protein Aquaporin
Aqpm At 1.68a Resolution
Length = 246
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 74/192 (38%), Gaps = 25/192 (13%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGR 102
ISG HINP VT + YI+AQ +G FG S +G
Sbjct: 76 ISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFG--------SFIFLQCAGIGAA 127
Query: 103 TLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXX 162
T+ + P G+ A+ E+ +F+ + M +A DER K A + +
Sbjct: 128 TVGGLGATAPFP---GISYWQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLT-- 182
Query: 163 XXXXXXXFVSTTVTAQKGYGGAGRNPARCLGP----AFVRGGHLWDRHWVFWAGPATACV 218
V+ +T G+ NPAR GP G LW+ + ++ GP V
Sbjct: 183 --------VAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAV 234
Query: 219 AFALYIKLIPSQ 230
AL + + S+
Sbjct: 235 LAALTYQYLTSE 246
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
Query: 2 WRASLTEVLGTALLVFALDTIVISSIQTDTIIAILLLATFP--------ISGGHINPLVT 53
W+A L EV+GT LL+ + I + I++ T ISG +NP T
Sbjct: 144 WQAMLAEVVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTLGNISGSSLNPART 203
Query: 54 FSAAL-----IGHMTVTRAAIYILAQCVGGVFGALAPKAVVS 90
F L G +IY++ VG V AL + + S
Sbjct: 204 FGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245
>pdb|2W1P|A Chain A, 1.4 Angstrom Crystal Structure Of P.Pastoris Aquaporin,
Aqy1, In A Closed Conformation At Ph 8.0
pdb|2W2E|A Chain A, 1.15 Angstrom Crystal Structure Of P.Pastoris Aquaporin,
Aqy1, In A Closed Conformation At Ph 3.5
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 70/174 (40%), Gaps = 27/174 (15%)
Query: 40 TFPISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSL 99
T+ +SGG++NP VT + L + R + Q V G+ A A A+ +I A +L
Sbjct: 103 TYRVSGGNLNPAVTLALVLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIAFANAL 162
Query: 100 GGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCX 159
GG G L+LE F + + + +A ++ +A A +
Sbjct: 163 GG----------------GASRTRGLFLEAFGTAILCLTVLMLAVEKHRATWFAPFVIGI 206
Query: 160 XXXXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGP 213
+ Y GAG NPAR GPA V + HW++W GP
Sbjct: 207 ALLIAHLICIY----------YTGAGLNPARSFGPA-VAARSFPNYHWIYWLGP 249
>pdb|3NK5|A Chain A, Crystal Structure Of Aqpz Mutant F43w
pdb|3NK5|B Chain B, Crystal Structure Of Aqpz Mutant F43w
Length = 234
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAIGLAL 173
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V+ T NPAR A +GG ++ W FW
Sbjct: 174 TLIHLISIPVTNTSV----------NPARSTAVAIFQGGWALEQLWFFW 212
>pdb|1RC2|B Chain B, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z
pdb|1RC2|A Chain A, 2.5 Angstrom Resolution X-Ray Structure Of Aquaporin Z
pdb|2ABM|A Chain A, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|B Chain B, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|C Chain C, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|D Chain D, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|E Chain E, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|F Chain F, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|G Chain G, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
pdb|2ABM|H Chain H, Crystal Structure Of Aquaporin Z Tetramer Reveals Both
Open And Closed Water-Conducting Channels
Length = 231
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 57 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 116
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 117 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAIGLAL 170
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V+ T NPAR A +GG ++ W FW
Sbjct: 171 TLIHLISIPVTNTSV----------NPARSTAVAIFQGGWALEQLWFFW 209
>pdb|2O9F|A Chain A, Crystal Structure Of Aqpz Mutant L170c
pdb|2O9F|B Chain B, Crystal Structure Of Aqpz Mutant L170c
pdb|2O9G|A Chain A, Crystal Structure Of Aqpz Mutant L170c Complexed With
Mercury
Length = 234
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAIGLAC 173
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
V+ T NPAR A +GG ++ W FW
Sbjct: 174 TLIHLISIPVTNTSV----------NPARSTAVAIFQGGWALEQLWFFW 212
>pdb|3NKA|A Chain A, Crystal Structure Of Aqpz H174g,T183f
pdb|3NKA|B Chain B, Crystal Structure Of Aqpz H174g,T183f
Length = 234
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAI---- 169
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
+S VT NPAR A +GG ++ W FW
Sbjct: 170 GLALTLIGLISIPVTNFS------VNPARSTAVAIFQGGWALEQLWFFW 212
>pdb|3NKC|A Chain A, Crystal Structure Of Aqpz F43w,H174g,T183f
pdb|3NKC|B Chain B, Crystal Structure Of Aqpz F43w,H174g,T183f
Length = 234
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAI---- 169
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
+S VT NPAR A +GG ++ W FW
Sbjct: 170 GLALTLIGLISIPVTNFS------VNPARSTAVAIFQGGWALEQLWFFW 212
>pdb|2O9D|A Chain A, Crystal Structure Of Aqpz Mutant T183c.
pdb|2O9D|B Chain B, Crystal Structure Of Aqpz Mutant T183c
Length = 234
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAIG--- 170
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
+S VT NPAR A +GG ++ W FW
Sbjct: 171 -LALTLIHLISIPVTNCS------VNPARSTAVAIFQGGWALEQLWFFW 212
>pdb|2O9E|A Chain A, Crystal Structure Of Aqpz Mutant T183c Complexed With
Mercury
Length = 234
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 64/169 (37%), Gaps = 17/169 (10%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIE-HAFSLGG 101
ISGGH NP VT G Y++AQ VGG+ A + S K A + G
Sbjct: 60 ISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGF 119
Query: 102 RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXX 161
+ E P G L AL +E+ S FL + A D+ A +++
Sbjct: 120 ASNGYGEHSPGGYSMLS-----ALVVELVLSAGFLLV-IHGATDKFAPAGFAPIAIG--- 170
Query: 162 XXXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFW 210
+S VT NPAR A +GG ++ W FW
Sbjct: 171 -LALTLIHLISIPVTNCS------VNPARSTAVAIFQGGWALEQLWFFW 212
>pdb|3LLQ|A Chain A, Aquaporin Structure From Plant Pathogen Agrobacterium
Tumerfaciens
pdb|3LLQ|B Chain B, Aquaporin Structure From Plant Pathogen Agrobacterium
Tumerfaciens
Length = 256
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 68/189 (35%), Gaps = 17/189 (8%)
Query: 43 ISGGHINPLVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGR 102
ISGGH NP V+ + G + Y++AQ G + A A + + K LGG
Sbjct: 85 ISGGHFNPAVSVGLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGK--AGIDLGGF 142
Query: 103 TLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCXXXX 162
+ G G AL +EI + FL + + R A +++
Sbjct: 143 ASNGYGEHSPG----GYSLVSALLIEIILTAFFLIVIL-GSTHGRVPAGFAPIAIGLALT 197
Query: 163 XXXXXXXFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFAL 222
V+ T NPAR G A GG + W+FW P A A+
Sbjct: 198 LIHLISIPVTNTSV----------NPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAV 247
Query: 223 YIKLIPSQH 231
KL +
Sbjct: 248 IWKLFGEKD 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.328 0.139 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,434,744
Number of Sequences: 62578
Number of extensions: 226649
Number of successful extensions: 499
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 414
Number of HSP's gapped (non-prelim): 41
length of query: 235
length of database: 14,973,337
effective HSP length: 96
effective length of query: 139
effective length of database: 8,965,849
effective search space: 1246253011
effective search space used: 1246253011
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 50 (23.9 bits)