Query 036381
Match_columns 235
No_of_seqs 178 out of 1302
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 20:55:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036381.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036381hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gd8_A Aquaporin-4; proton exc 100.0 4.5E-50 1.5E-54 334.2 12.9 205 1-229 3-222 (223)
2 3llq_A Aquaporin Z 2; aquapori 100.0 1.2E-49 4.1E-54 336.5 12.3 213 1-230 29-255 (256)
3 2o9g_A Aquaporin Z; integral m 100.0 1E-49 3.4E-54 334.5 11.3 214 1-231 4-233 (234)
4 3iyz_A Aquaporin-4; water tran 100.0 1.1E-48 3.7E-53 340.2 16.3 206 1-230 51-271 (340)
5 2zz9_A Aquaporin-4; water tran 100.0 5E-48 1.7E-52 333.3 15.7 205 1-229 12-231 (301)
6 1ldf_A Glycerol uptake facilit 100.0 4.7E-49 1.6E-53 338.6 8.3 221 1-233 7-260 (281)
7 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 6.1E-48 2.1E-52 328.6 15.0 207 1-231 11-229 (266)
8 2b6o_A Aquaporin-0, lens fiber 100.0 2E-47 6.8E-52 325.3 17.0 207 1-231 9-226 (263)
9 2f2b_A Aquaporin AQPM; protein 100.0 1.6E-47 5.4E-52 323.6 15.1 209 1-230 4-246 (246)
10 1j4n_A Aquaporin 1; membrane p 100.0 9.9E-48 3.4E-52 328.5 13.1 208 1-232 10-237 (271)
11 3cn5_A Aquaporin; membrane pro 100.0 4E-48 1.4E-52 334.6 10.7 212 1-231 60-290 (304)
12 2w2e_A AQY1, aquaporin, aquapo 100.0 4.8E-47 1.6E-51 325.0 16.3 204 2-232 45-268 (279)
13 3c02_A Aquaglyceroporin; membr 100.0 2.5E-48 8.6E-53 330.4 6.4 214 1-231 9-245 (258)
14 2b6o_A Aquaporin-0, lens fiber 99.6 2.8E-15 9.6E-20 127.2 8.7 106 119-232 7-112 (263)
15 3llq_A Aquaporin Z 2; aquapori 99.5 2.9E-14 9.8E-19 120.2 7.2 106 119-229 27-132 (256)
16 3cn5_A Aquaporin; membrane pro 99.5 1.8E-14 6E-19 124.3 4.7 109 120-231 59-167 (304)
17 3iyz_A Aquaporin-4; water tran 99.5 5.3E-14 1.8E-18 122.4 6.8 109 120-232 50-158 (340)
18 2o9g_A Aquaporin Z; integral m 99.5 6.6E-14 2.3E-18 116.9 6.5 107 120-231 3-109 (234)
19 2zz9_A Aquaporin-4; water tran 99.5 9.5E-14 3.2E-18 119.6 7.5 109 119-231 10-118 (301)
20 3c02_A Aquaglyceroporin; membr 99.5 3.6E-14 1.2E-18 120.1 4.8 107 119-231 7-113 (258)
21 3d9s_A Aquaporin-5, AQP-5; aqu 99.5 3.9E-14 1.3E-18 120.3 4.9 104 119-230 9-112 (266)
22 2w2e_A AQY1, aquaporin, aquapo 99.4 2E-13 6.7E-18 116.7 8.9 109 120-231 43-155 (279)
23 3gd8_A Aquaporin-4; proton exc 99.4 3.9E-14 1.3E-18 117.5 4.2 108 120-231 2-109 (223)
24 2f2b_A Aquaporin AQPM; protein 99.4 3.2E-13 1.1E-17 113.6 9.8 108 120-230 3-124 (246)
25 1j4n_A Aquaporin 1; membrane p 99.4 1.1E-13 3.6E-18 118.0 5.9 108 120-230 9-120 (271)
26 1ldf_A Glycerol uptake facilit 99.4 1.8E-13 6.2E-18 117.2 5.3 106 119-231 5-111 (281)
27 3s2u_A UDP-N-acetylglucosamine 50.0 3.1 0.00011 35.7 -0.3 21 41-61 9-29 (365)
No 1
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-50 Score=334.20 Aligned_cols=205 Identities=27% Similarity=0.495 Sum_probs=164.7
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccC--C---ch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCcc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQ--T---DT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVT 65 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~--~---~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~ 65 (235)
+||++++||+||++|++.++++..+... + .. ++++.+++++++||+|+|||||+++++.|+++|+
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 82 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 82 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHcCCCCHH
Confidence 4899999999999999998877653211 1 11 6778899999999999999999999999999999
Q ss_pred chhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhc
Q 036381 66 RAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFD 145 (235)
Q Consensus 66 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~ 145 (235)
+++.|+++|++||++|+.+++.+++++... +.+. +++.| +.+..++++.|+++|++|+++++... |
T Consensus 83 ~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~--~lg~-----~~~~~------~~s~~~~~~~E~i~Tf~Lv~~i~~~~-~ 148 (223)
T 3gd8_A 83 KSVFYIAAQCLGAIIGAGILYLVTPPSVVG--GLGV-----TMVHG------NLTAGHGLLVELIITFQLVFTIFASC-D 148 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHHHT--TTTC-----CCCCT------TSCHHHHHHHHHHHHHHHHHHHHHHT-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccc--ceee-----ccCCC------ccCHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 999999999999999999999998865422 1221 12222 46889999999999999999988654 5
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHH
Q 036381 146 ERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIK 225 (235)
Q Consensus 146 ~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~ 225 (235)
+++.... ...|+.+|+.+++....+. ++||++||||||||||++.+ +|+++|+||++|++|+++++++||
T Consensus 149 ~~~~~~~--~~~pl~iGl~v~~~~~~g~------~~TG~a~NPAR~~GP~l~~~--~w~~~Wvy~vgP~~Ga~la~~~y~ 218 (223)
T 3gd8_A 149 SKRTDVT--GSIALAIGFSVAIGHLFAI------NYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAGGLYE 218 (223)
T ss_dssp TTCSCCC--SCHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHT--CCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred cccCCcc--CCccHHHHHHHHHHHHhcc------CCccccccHHHHHHHHHHhc--CCCcEEeehhHHHHHHHHHHHHHH
Confidence 4433211 2346777777655444432 57899999999999999987 799999999999999999999999
Q ss_pred HhcC
Q 036381 226 LIPS 229 (235)
Q Consensus 226 ~l~~ 229 (235)
++..
T Consensus 219 ~~~~ 222 (223)
T 3gd8_A 219 YVFC 222 (223)
T ss_dssp HTTC
T ss_pred HHcC
Confidence 8875
No 2
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=1.2e-49 Score=336.47 Aligned_cols=213 Identities=27% Similarity=0.336 Sum_probs=168.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccc--C-C-ch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCccc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSI--Q-T-DT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTR 66 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~--~-~-~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~ 66 (235)
++|++++||+||++|+++++++..... . . .. ++++++++++++||||+|||||+++++.|+++|++
T Consensus 29 l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 108 (256)
T 3llq_A 29 MGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGRFPASS 108 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHHHHHHhcCCCHHH
Confidence 589999999999999998887653211 1 1 11 67788999999999999999999999999999999
Q ss_pred hhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 036381 67 AAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDE 146 (235)
Q Consensus 67 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~~ 146 (235)
++.|+++|++||++|+.+++.+++++.. .+..+....+..++.|. +.+..++++.|+++|++|+++++.. .|+
T Consensus 109 ~~~YiiAQ~lGA~~ga~lv~~~~~~~~~-~~~~~~~~~~~~~t~p~-----~~s~~~~f~~E~i~Tf~Lv~~il~~-~d~ 181 (256)
T 3llq_A 109 LVPYVIAQVAGAIVAAAALYVIATGKAG-IDLGGFASNGYGEHSPG-----GYSLVSALLIEIILTAFFLIVILGS-THG 181 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTBTT-CCCTTTTCCCCGGGSTT-----CCCHHHHHHHHHHHHHHHHHHHHHH-HST
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccc-ccccccccccccccCCc-----ccCHHHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 9999999999999999999998864321 00001111223345665 3689999999999999999998854 565
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHHH
Q 036381 147 RQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIKL 226 (235)
Q Consensus 147 ~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~ 226 (235)
++.+ ...|+.+|+.+....+..+ ++||++||||||||||+++|+..|+++||||++|++|+++++++||+
T Consensus 182 ~~~~----~~~pl~IGl~v~~i~~~~g------~~TG~a~NPAR~lGPal~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~ 251 (256)
T 3llq_A 182 RVPA----GFAPIAIGLALTLIHLISI------PVTNTSVNPARSTGQALFVGGWALQQLWLFWLAPIVGGAAGAVIWKL 251 (256)
T ss_dssp TSCT----TCHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc----cchhHHHHHHHHHHHHHhc------cccccccChHHHHHHHHHcCCCcccceeeeeeHHHHHHHHHHHHHHH
Confidence 5432 2347788888777666544 56889999999999999987556779999999999999999999999
Q ss_pred hcCC
Q 036381 227 IPSQ 230 (235)
Q Consensus 227 l~~~ 230 (235)
+.++
T Consensus 252 l~~~ 255 (256)
T 3llq_A 252 FGEK 255 (256)
T ss_dssp HTSC
T ss_pred hccC
Confidence 8743
No 3
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=1e-49 Score=334.49 Aligned_cols=214 Identities=26% Similarity=0.327 Sum_probs=170.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccCC---c-h----------hhHhHHHhhcCccccccchHHHHHHHHhccCCccc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQT---D-T----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTR 66 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~~---~-~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~ 66 (235)
++|++++||+||++|+|.++++....... + . ++++++++++++||+|+|||||+++++.|+++|++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~ 83 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFPELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKE 83 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHHhCCCCHHH
Confidence 47999999999999999887765322211 1 1 67888999999999999999999999999999999
Q ss_pred hhhheeccchhHHHhhhhhhhhcccch--hhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 036381 67 AAIYILAQCVGGVFGALAPKAVVSTKI--EHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAF 144 (235)
Q Consensus 67 ~~~yi~aQ~~Ga~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~ 144 (235)
++.|+++|++||++|+.+++.++++.. +..++ +..+.+..++.|. +.+..++++.|+++|++|+++++.. .
T Consensus 84 ~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~-~~~~~~~~~t~p~-----~~~~~~~~~~E~i~T~~Lv~~i~~~-~ 156 (234)
T 2o9g_A 84 VVGYVIAQVVGGIVAAALLYLIASGKTGFDAAAS-GFASNGYGEHSPG-----GYSMLSALVVELVLSAGFLLVIHGA-T 156 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHH-CTTCCCCGGGSTT-----CCCHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCccccccccc-ccccceeeecCCC-----ccchHHHHHHHHHHHHHHHHHHHHh-c
Confidence 999999999999999999999987542 11101 1111223345565 3688999999999999999998864 4
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHH
Q 036381 145 DERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYI 224 (235)
Q Consensus 145 ~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~ 224 (235)
|+|+.+ ...|+.+|+.+....+..+ ++||++||||||||||+++|+.+|+++|+||++|++|+++++++|
T Consensus 157 d~~~~~----~~~pl~IGl~v~~~~~~~g------~~TG~s~NPAR~lGPal~~g~~~~~~~Wv~~vgP~~Ga~la~~~y 226 (234)
T 2o9g_A 157 DKFAPA----GFAPIAIGLACTLIHLISI------PVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGIIGGLIY 226 (234)
T ss_dssp STTSCT----TCHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHCSHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcc----chHHHHHHHHHHHHHHHcc------CCCccccChHHHHHHHHHhCCCCCceeeeeehHHhHHHHHHHHHH
Confidence 554322 2457788888877666654 668899999999999999986667799999999999999999999
Q ss_pred HHhcCCC
Q 036381 225 KLIPSQH 231 (235)
Q Consensus 225 ~~l~~~~ 231 (235)
|++.+++
T Consensus 227 ~~~~~~~ 233 (234)
T 2o9g_A 227 RTLLEKR 233 (234)
T ss_dssp HHHTSCC
T ss_pred HHHcCCC
Confidence 9987653
No 4
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-48 Score=340.19 Aligned_cols=206 Identities=28% Similarity=0.495 Sum_probs=164.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccC-C----ch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCcc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQ-T----DT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVT 65 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~-~----~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~ 65 (235)
+||++++||+||++|+|+++++..+... + .. ++++++|+++++||||+|||||+++++.|+++|+
T Consensus 51 l~r~~lAEflGT~lLV~~G~Gs~a~~~~~~~~~~~g~l~Iala~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~ 130 (340)
T 3iyz_A 51 FWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 130 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHH
Confidence 4899999999999999998876653211 1 10 6778899999999999999999999999999999
Q ss_pred chhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhc
Q 036381 66 RAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFD 145 (235)
Q Consensus 66 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~ 145 (235)
+++.|+++|++||++|+.+++.++++.... .++.+.+.| +.+..++++.|+++||+|+++++... |
T Consensus 131 ~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~-------~lg~~~~~~------~~s~~~~f~~E~i~Tf~Lv~~Ila~~-d 196 (340)
T 3iyz_A 131 KSVFYITAQCLGAIIGAGILYLVTPPSVVG-------GLGVTTVHG------NLTAGHGLLVELIITFQLVFTIFASC-D 196 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhcC-------ceeeccCCC------ccCHHHHHHHHHHHHHHHHHHHHHhh-c
Confidence 999999999999999999999998764321 122222222 46889999999999999999988754 4
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHH
Q 036381 146 ERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIK 225 (235)
Q Consensus 146 ~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~ 225 (235)
+++.... ...|+.+|+++++... .+. ++||++|||||||||+++.+ .|+++||||+||++|+++|+++|+
T Consensus 197 ~~~~~~~--~~~pl~IGl~v~i~~~----~g~--~~TG~amNPARdlGPal~~~--~w~~~WVywvgPiiGailaallY~ 266 (340)
T 3iyz_A 197 DKRTDVT--GSVALAIGFSVAIGHL----FAI--NYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAGALYE 266 (340)
T ss_pred CccCCcc--cchhhHHHHHHHHHHH----hcc--CCccccccHHHHHHHHHHcc--CCCcEeehhHHHHHHHHHHHHHHH
Confidence 4332211 2236667766644333 333 78999999999999999976 799999999999999999999999
Q ss_pred HhcCC
Q 036381 226 LIPSQ 230 (235)
Q Consensus 226 ~l~~~ 230 (235)
++..+
T Consensus 267 ~l~~p 271 (340)
T 3iyz_A 267 YVFCP 271 (340)
T ss_pred HHhCC
Confidence 88743
No 5
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=5e-48 Score=333.27 Aligned_cols=205 Identities=29% Similarity=0.537 Sum_probs=165.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccCC------ch---------hhHhHHHhhcCccccccchHHHHHHHHhccCCcc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQT------DT---------IIAILLLATFPISGGHINPLVTFSAALIGHMTVT 65 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~~------~~---------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~ 65 (235)
+||++++||+||++|+|+++++..+.... +. ++++++++++++||||+|||||+++++.|+++|+
T Consensus 12 ~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~~~~~ 91 (301)
T 2zz9_A 12 FWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIA 91 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHTSSSCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHhcCCCHH
Confidence 48999999999999999988766432211 10 6778899999999999999999999999999999
Q ss_pred chhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhc
Q 036381 66 RAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFD 145 (235)
Q Consensus 66 ~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~ 145 (235)
+++.|+++|++||++|+.+++.+++++... ..+. +.|.. +.+..++++.|+++||+|+++++... |
T Consensus 92 ~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~--~~g~-------~~~~~----~~s~~~~f~~E~i~Tf~Lv~~Il~~~-d 157 (301)
T 2zz9_A 92 KSVFYITAQCLGAIIGAGILYLVTPPSVVG--GLGV-------TTVHG----NLTAGHGLLVELIITFQLVFTIFASC-D 157 (301)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTSCSCGGG--TSSC-------CCCCS----SCCHHHHHHHHHHHHHHHHHHHHHHS-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccC--ceee-------ecCCc----ccchHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 999999999999999999999999875422 1111 12222 47889999999999999999988654 4
Q ss_pred chhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHH
Q 036381 146 ERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIK 225 (235)
Q Consensus 146 ~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~ 225 (235)
+++... ....|+.+|+.+++....+. ++||++||||||||||++.+ .|+++|+||++|++|+++|+++|+
T Consensus 158 ~~~~~~--~~~~pl~IGl~v~i~~~~g~------~~TG~a~NPAR~~GPal~~~--~w~~~WVy~vgPiiGailaa~ly~ 227 (301)
T 2zz9_A 158 DKRTDV--TGSVALAIGFSVAIGHLFAI------NYTGASMNPARSFGPAVIMG--NWENHWIYWVGPIIGAVLAGALYE 227 (301)
T ss_dssp SSSSCC--SSCHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHC--CCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCc--cchHhHHHHHHHHHHHHHhc------CCcccccCcHHHHHHHHHhC--CCcceeeeeeHHHHHHHHHHHHHH
Confidence 443321 12347777777755444432 67899999999999999987 799999999999999999999999
Q ss_pred HhcC
Q 036381 226 LIPS 229 (235)
Q Consensus 226 ~l~~ 229 (235)
++..
T Consensus 228 ~l~~ 231 (301)
T 2zz9_A 228 YVFC 231 (301)
T ss_dssp TTTC
T ss_pred HHhC
Confidence 8864
No 6
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=4.7e-49 Score=338.64 Aligned_cols=221 Identities=19% Similarity=0.218 Sum_probs=171.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhc----ccCCch---------hhHhHHHhhcCccccccchHHHHHHHHhccCCccch
Q 036381 1 VWRASLTEVLGTALLVFALDTIVIS----SIQTDT---------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTRA 67 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~----~~~~~~---------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~ 67 (235)
++|++++||+||++|+|.++++... ....+. ++++++++++++||||+|||||+++++.|+++|+++
T Consensus 7 ~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 86 (281)
T 1ldf_A 7 LKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKV 86 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHSCCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHHHHcCCCCHHHH
Confidence 3799999999999999988765432 111111 677889999999999999999999999999999999
Q ss_pred hhheeccchhHHHhhhhhhhhcccchhhhhc----CC-----CceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHH
Q 036381 68 AIYILAQCVGGVFGALAPKAVVSTKIEHAFS----LG-----GRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFA 138 (235)
Q Consensus 68 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~ 138 (235)
+.|+++|++||++|+.+++.++++++.+.+. .. ..+.+.+++.|.. +.+..++++.|+++|++|+++
T Consensus 87 ~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~----~~s~~~~~~~E~i~Tf~Lv~~ 162 (281)
T 1ldf_A 87 IPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNP----HINFVQAFAVEMVITAILMGL 162 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCT----TCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCc----cccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876544321 00 0112334556654 578999999999999999999
Q ss_pred HHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh-----CCCC------CCcee
Q 036381 139 SMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR-----GGHL------WDRHW 207 (235)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~-----g~~~------~~~~w 207 (235)
++.. .|+++... .....|+.+|+.+....+..+ ++||++||||||||||+++ |++. |.|+|
T Consensus 163 il~~-~d~~~~~~-~~~~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~~W 234 (281)
T 1ldf_A 163 ILAL-TDDGNGVP-RGPLAPLLIGLLIAVIGASMG------PLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPYFL 234 (281)
T ss_dssp HHHH-HCTTSSSC-CGGGHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCTTH
T ss_pred HHHH-hccCCCCc-ccchHHHHHHHHHHHHHHhcc------cccccccCcHhhHHHHHHHHhcccccccccccCCCceee
Confidence 8875 45443221 123457788887776665544 6788999999999999986 2222 22899
Q ss_pred eeehhHHHHHHHHHHHHHHhcCCCCC
Q 036381 208 VFWAGPATACVAFALYIKLIPSQHLH 233 (235)
Q Consensus 208 vy~v~p~~Ga~~a~~~~~~l~~~~~~ 233 (235)
|||++|++|+++++++||++..+|.+
T Consensus 235 Vy~vgPi~Ga~la~~~y~~l~~~~~~ 260 (281)
T 1ldf_A 235 VPLFGPIVGAIVGAFAYRKLIGRHLP 260 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGC-
T ss_pred HHhHHHHHHHHHHHHHHHHHhCccCC
Confidence 99999999999999999999866543
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.1e-48 Score=328.65 Aligned_cols=207 Identities=28% Similarity=0.411 Sum_probs=167.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccCC--ch---------hhHhHHHhhcCccccccchHHHHHHHHhccCCccchhh
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQT--DT---------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAI 69 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~~--~~---------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~ 69 (235)
++|++++||+||++|+|+++++....... +. ++++++++++++||||+|||||+++++.|+++|++++.
T Consensus 11 ~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~~~ 90 (266)
T 3d9s_A 11 FLKAVFAEFLATLIFVFFGLGSALKWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFF 90 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTSSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccHHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHhcCCCHHHHHH
Confidence 37999999999999999988776432211 11 67778999999999999999999999999999999999
Q ss_pred heeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhcchhh
Q 036381 70 YILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQA 149 (235)
Q Consensus 70 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~ 149 (235)
|+++|++||++|+.+++.+++++.... .+. +.|.. +.+..++++.|+++|++|+++++.. .|+++.
T Consensus 91 Yi~AQ~lGA~~ga~l~~~~~~~~~~~~--~g~-------~~~~~----~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~ 156 (266)
T 3d9s_A 91 YVAAQLVGAIAGAGILYGVAPLNARGN--LAV-------NALNN----NTTQGQAMVVELILTFQLALCIFAS-TDSRRT 156 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCHHHHTT--TTC-------CCCCT----TSCHHHHHHHHHHHHHHHHHHHHHH-HCTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHccccccCc--eee-------ccCCc----cccHHHHHHHHHHHHHHHHHHHHHH-hcccCC
Confidence 999999999999999999998643211 111 12322 4788999999999999999999876 455443
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCc-eeeeehhHHHHHHHHHHHHHHhc
Q 036381 150 KALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDR-HWVFWAGPATACVAFALYIKLIP 228 (235)
Q Consensus 150 ~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~-~wvy~v~p~~Ga~~a~~~~~~l~ 228 (235)
... ...|+.+|+.+.+..+.+. ++||++|||||||||+++++ +|++ +||||++|++|+++++++|+++.
T Consensus 157 ~~~--~~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~--~~~~~~Wvy~vgP~~Ga~la~~~y~~l~ 226 (266)
T 3d9s_A 157 SPV--GSPALSIGLSVTLGHLVGI------YFTGCSMNPARSFGPAVVMN--RFSPAHWVFWVGPIVGAVLAAILYFYLL 226 (266)
T ss_dssp SCC--CCHHHHHHHHHHHHHHHHH------HHHSCCSCHHHHHHHHHHHT--CCCTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred Ccc--chHHHHHHHHHHHHHHHhh------ccccccccHHHHHHHHHHcC--CcccCEeeeehHHHHHHHHHHHHHHHHh
Confidence 211 2357788877766555543 66889999999999999987 8998 99999999999999999999987
Q ss_pred CCC
Q 036381 229 SQH 231 (235)
Q Consensus 229 ~~~ 231 (235)
.++
T Consensus 227 ~~~ 229 (266)
T 3d9s_A 227 FPN 229 (266)
T ss_dssp SCC
T ss_pred CCC
Confidence 654
No 8
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=2e-47 Score=325.35 Aligned_cols=207 Identities=31% Similarity=0.480 Sum_probs=166.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcccC-Cch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCccchhh
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSIQ-TDT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTRAAI 69 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~~-~~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~~~ 69 (235)
++|++++||+||++|+++++++...... ... ++++++++++++||+|+|||||+++++.|+++|++.+.
T Consensus 9 ~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~g~~~~~~~~~ 88 (263)
T 2b6o_A 9 FWRAIFAEFFATLFYVFFGLGASLRWAPGPLHVLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAIC 88 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHhcCCCHHHHHH
Confidence 3799999999999999998887643211 111 56778899999999999999999999999999999999
Q ss_pred heeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhcchhh
Q 036381 70 YILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDERQA 149 (235)
Q Consensus 70 yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~ 149 (235)
|+++|++||++|+.+++.+++++.... .+ .+++.| +++..++++.|+++|++|+++++.. .|+++.
T Consensus 89 Yi~AQ~lGa~~ga~l~~~~~~~~~~~~--~~-----~~~~~~------~~s~~~~~~~E~i~Tf~Lv~~il~~-~d~~~~ 154 (263)
T 2b6o_A 89 YVVAQLLGAVAGAAVLYSVTPPAVRGN--LA-----LNTLHP------GVSVGQATIVEIFLTLQFVLCIFAT-YDERRN 154 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTTCSS--CS-----CCCCCT------TCCHHHHHHHHHHHHHHHHHHHHHH-SCTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHcccccccc--cc-----cccCCc------cccHHHHHHHHHHHHHHHHHHHHHH-hcccCC
Confidence 999999999999999999998654221 11 112223 4688999999999999999998865 555443
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHHHhcC
Q 036381 150 KALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIKLIPS 229 (235)
Q Consensus 150 ~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~ 229 (235)
.. ....|+.+|+.+....+.. + ++||++|||||||||+++.+ +|+++|+||++|++|+++++++|+++..
T Consensus 155 ~~--~~~~pl~IGl~v~~~~~~~----g--~~TG~a~NPAR~~GPal~~~--~~~~~Wvy~vgP~~Ga~la~~~y~~l~~ 224 (263)
T 2b6o_A 155 GR--LGSVALAVGFSLTLGHLFG----M--YYTGAGMNPARSFAPAILTR--NFTNHWVYWVGPVIGAGLGSLLYDFLLF 224 (263)
T ss_dssp SS--CCCHHHHHHHHHHHHHHHH----T--TTSTTCCCHHHHHHHHHHHT--CCTTCTHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CC--cccHHHHHHHHHHHHHHhc----c--CCCcccccHHHHHHHHHHcC--CccceeHHHHHHHHHHHHHHHHHHHHhC
Confidence 21 1234777777766554443 2 78999999999999999987 8999999999999999999999998876
Q ss_pred CC
Q 036381 230 QH 231 (235)
Q Consensus 230 ~~ 231 (235)
++
T Consensus 225 ~~ 226 (263)
T 2b6o_A 225 PR 226 (263)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 9
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=1.6e-47 Score=323.60 Aligned_cols=209 Identities=27% Similarity=0.367 Sum_probs=168.0
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccc--------------C-----Cc-----h------hhHhHHHhhcCccccccch
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSI--------------Q-----TD-----T------IIAILLLATFPISGGHINP 50 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~--------------~-----~~-----~------~~~~~i~~~~~iSGah~NP 50 (235)
++|++++||+||++|+|.++++..... . .. . ++++.+++++++||+|+||
T Consensus 4 ~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~NP 83 (246)
T 2f2b_A 4 LTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINP 83 (246)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeCH
Confidence 479999999999999998776542211 0 11 1 5678899999999999999
Q ss_pred HHHHHHHHhccCCccchhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHH
Q 036381 51 LVTFSAALIGHMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIF 130 (235)
Q Consensus 51 avTla~~~~g~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i 130 (235)
|||+++++.|+++|++++.|+++|++||++|+.+++.+++++...... .+++.|.. +.+..++++.|++
T Consensus 84 AVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~-------~~~t~p~~----~~~~~~~~~~E~i 152 (246)
T 2f2b_A 84 AVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGG-------LGATAPFP----GISYWQAMLAEVV 152 (246)
T ss_dssp HHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTG-------GGCCCCCT----TCCHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcce-------eeeccCcc----ccchHHHHHHHHH
Confidence 999999999999999999999999999999999999999874322111 12345643 5789999999999
Q ss_pred HHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHH--hh--CCCCCCce
Q 036381 131 CSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAF--VR--GGHLWDRH 206 (235)
Q Consensus 131 ~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~--~~--g~~~~~~~ 206 (235)
+|++|+++++....|+++.. ...|+.+|+.+....+..+ ++||+++||||||||++ .. ++..|+|.
T Consensus 153 ~Tf~Lv~~i~~~~~~~~~~~----~~~pl~iGl~v~~~~~~~g------~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~ 222 (246)
T 2f2b_A 153 GTFLLMITIMGIAVDERAPK----GFAGIIIGLTVAGIITTLG------NISGSSLNPARTFGPYLNDMIFAGTDLWNYY 222 (246)
T ss_dssp HHHHHHHHHHHHTTSTTSCT----TCHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHHHCCCCGGGT
T ss_pred HHHHHHheeeEEecCCCCCC----ceeeHHHHHHHHHHHhccc------ccCCCccCHHHHHHHHHHHHHcCCCCCcceE
Confidence 99999999987666654432 2347777777776666554 67899999999999999 33 45688999
Q ss_pred eeeehhHHHHHHHHHHHHHHhcCC
Q 036381 207 WVFWAGPATACVAFALYIKLIPSQ 230 (235)
Q Consensus 207 wvy~v~p~~Ga~~a~~~~~~l~~~ 230 (235)
|+||++|++|+++++++||++.+|
T Consensus 223 ~vy~vap~~Ga~laa~~y~~l~~~ 246 (246)
T 2f2b_A 223 SIYVIGPIVGAVLAALTYQYLTSE 246 (246)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTC-
T ss_pred EEeeeHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999998764
No 10
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=9.9e-48 Score=328.52 Aligned_cols=208 Identities=30% Similarity=0.503 Sum_probs=164.3
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhcc-------cCC----ch---------hhHhHHHhhcCccccccchHHHHHHHHhc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISS-------IQT----DT---------IIAILLLATFPISGGHINPLVTFSAALIG 60 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~-------~~~----~~---------~~~~~i~~~~~iSGah~NPavTla~~~~g 60 (235)
+||++++||+||++|+|.++++.... ... +. ++++++++++++||||+|||||+++++.|
T Consensus 10 ~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~g 89 (271)
T 1j4n_A 10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSC 89 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHcC
Confidence 47999999999999999887765321 111 11 66778899999999999999999999999
Q ss_pred cCCccchhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHH
Q 036381 61 HMTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASM 140 (235)
Q Consensus 61 ~~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~ 140 (235)
+++|++++.|+++|++||++|+.+++.++++.... ..+. .++.| +++..++++.|+++|++|+++++
T Consensus 90 ~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~--~~g~-----~~~~~------~~~~~~~~~~E~i~T~~Lv~~i~ 156 (271)
T 1j4n_A 90 QISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN--SLGL-----NALAP------GVNSGQGLGIEIIGTLQLVLCVL 156 (271)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTC--CTTC-----CCCCT------TCCTTGGGHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCccc--cccc-----ccCCC------ccchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653211 1111 11223 46778999999999999999988
Q ss_pred HHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHH
Q 036381 141 WMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAF 220 (235)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a 220 (235)
.. .|+++... ....|+.+|+.+.+....+. ++||++|||||||||+++++ +|+++|+||++|++|++++
T Consensus 157 ~~-~d~~~~~~--~~~~pl~IGl~v~~~~~~~~------~~TG~a~NPAR~~Gpal~~~--~~~~~wv~~vgP~~Ga~la 225 (271)
T 1j4n_A 157 AT-TDRRRRDL--GGSGPLAIGFSVALGHLLAI------DYTGCGINPARSFGSSVITH--NFQDHWIFWVGPFIGAALA 225 (271)
T ss_dssp HH-TCSSCCCC--CSCHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHTT--CCTTTTHHHHHHHHHHHHH
T ss_pred hh-ccccCCCc--cccHHHHHHHHHHHHHHhcc------CCCccccChHHHHHHHHHhC--CCcceeHHHHHHHHHHHHH
Confidence 64 45443221 12457778877765444432 56889999999999999976 7999999999999999999
Q ss_pred HHHHHHhcCCCC
Q 036381 221 ALYIKLIPSQHL 232 (235)
Q Consensus 221 ~~~~~~l~~~~~ 232 (235)
+++|+++..++.
T Consensus 226 ~~~y~~~~~~~~ 237 (271)
T 1j4n_A 226 VLIYDFILAPRS 237 (271)
T ss_dssp HHHHHTTTSCCS
T ss_pred HHHHHHHhCCCC
Confidence 999999876553
No 11
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=4e-48 Score=334.56 Aligned_cols=212 Identities=30% Similarity=0.545 Sum_probs=168.6
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccc------CCch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCc
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSI------QTDT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTV 64 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~------~~~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~ 64 (235)
++|++++||+||++|+|+++++..... .... ++++++|+++++||||+|||||+++++.|+++|
T Consensus 60 ~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~ 139 (304)
T 3cn5_A 60 FWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVEL 139 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCH
Confidence 479999999999999998877653311 1111 577889999999999999999999999999999
Q ss_pred cchhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhh
Q 036381 65 TRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAF 144 (235)
Q Consensus 65 ~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~ 144 (235)
++++.|+++|++||++|+.+++.++++++.+. ..+.. .+. .+.+..++++.|+++||+|+++++ ...
T Consensus 140 ~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~-~~g~~-------~~~----~~~s~~~~f~~E~i~TfiLv~~Il-~~~ 206 (304)
T 3cn5_A 140 LRALVYMIAQCLGAICGVGLVKAFMKGPYNQF-GGGAN-------SVA----LGYNKGTALGAEIIGTFVLVYTVF-SAT 206 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHT-TTTCC-------CCC----TTCCHHHHHHHHHHHHHHHHHHHH-HTE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc-cCccc-------ccC----CCccHHHHHHHHHHHHHHHHHHHh-hee
Confidence 99999999999999999999999998765432 11111 122 257889999999999999999988 455
Q ss_pred cchhhhhhh--hhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhC-CCCCCceeeeehhHHHHHHHHH
Q 036381 145 DERQAKALA--RVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRG-GHLWDRHWVFWAGPATACVAFA 221 (235)
Q Consensus 145 ~~~~~~~~~--~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g-~~~~~~~wvy~v~p~~Ga~~a~ 221 (235)
|+++....+ +...|+.+|+++....+..+ ++||++||||||||||++.+ +..|+++|+||++|++|+++++
T Consensus 207 d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g------~~TG~amNPAR~~GPal~~~~~~~w~~~WvywvgPiiGa~laa 280 (304)
T 3cn5_A 207 DPKRSARDSHVPILAPLPIGFAVFMVHLATI------PITGTGINPARSFGAAVIFNSNKVWDDQWIFWVGPFIGAAVAA 280 (304)
T ss_dssp EEEEESTTSCCEEECHHHHHHHHHHHHHHHH------HHHSCCCCHHHHHHHHHHHCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cCccCCCCcccccchHHHHHHHHHHHHHhcc------CCCccccChHHHHHHHHHHccCCCcCceEEEeehHHHHHHHHH
Confidence 644332111 12457888888877666654 67889999999999999843 3489999999999999999999
Q ss_pred HHHHHhcCCC
Q 036381 222 LYIKLIPSQH 231 (235)
Q Consensus 222 ~~~~~l~~~~ 231 (235)
++|+++..+.
T Consensus 281 ~~y~~l~~~~ 290 (304)
T 3cn5_A 281 AYHQYVLRAA 290 (304)
T ss_dssp HHHHTTSCCC
T ss_pred HHHHHHhCCC
Confidence 9999887643
No 12
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=4.8e-47 Score=324.96 Aligned_cols=204 Identities=24% Similarity=0.409 Sum_probs=165.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhh--hccc------C-Cch-----------hhHhHHHhhcCccccccchHHHHHHHHhcc
Q 036381 2 WRASLTEVLGTALLVFALDTIV--ISSI------Q-TDT-----------IIAILLLATFPISGGHINPLVTFSAALIGH 61 (235)
Q Consensus 2 ~r~~~~Ef~gT~~lv~~~~~~~--~~~~------~-~~~-----------~~~~~i~~~~~iSGah~NPavTla~~~~g~ 61 (235)
+|++++||+||++|+|++++.. .+.. . ... ++++++++++++||||+|||||+++++.|+
T Consensus 45 ~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~g~ 124 (279)
T 2w2e_A 45 FIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALVLARA 124 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHHHcCC
Confidence 6899999999999999876642 1111 0 001 677889999999999999999999999999
Q ss_pred CCccchhhheeccchhHHHhhhhhhhhcccchhhhhcCCCceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHH
Q 036381 62 MTVTRAAIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGGRTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMW 141 (235)
Q Consensus 62 ~~~~~~~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~ 141 (235)
++|++++.|+++|++||++|+.+++.+++++.. +++.|.. +.+..++++.|+++|++|+++++.
T Consensus 125 ~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~------------~~t~~~~----~~s~~~~~~~E~i~Tf~Lv~~Il~ 188 (279)
T 2w2e_A 125 IPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA------------FANALGG----GASRTRGLFLEAFGTAILCLTVLM 188 (279)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC------------CSCCCCT----TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHccccce------------eeccCCc----cccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999976541 1234543 478899999999999999999987
Q ss_pred HhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHH
Q 036381 142 MAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFA 221 (235)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~ 221 (235)
...++++.. ...|+.+|+.+....+..+ ++||++||||||||||++++. .++++||||++|++|+++++
T Consensus 189 ~~~~~~~~~----~~~pl~IGl~v~~~~l~~g------~~TG~s~NPAR~~GPal~~~~-~~~~~WVy~vgPiiGa~la~ 257 (279)
T 2w2e_A 189 LAVEKHRAT----WFAPFVIGIALLIAHLICI------YYTGAGLNPARSFGPAVAARS-FPNYHWIYWLGPILGAFLAY 257 (279)
T ss_dssp HTTSCSTTG----GGHHHHHHHHHHHHHHHHH------HHHCCCCSHHHHHHHHHHHTC-CCTTTTHHHHHHHHHHHHHH
T ss_pred HccCCCCCc----CcHHHHHHHHHHHHHHhcc------cccccccChHHHHHHHHHhcc-chhhhhHHHHHHHHHHHHHH
Confidence 765554322 2457777777776665543 678999999999999999862 34689999999999999999
Q ss_pred HHHHHhcCCCC
Q 036381 222 LYIKLIPSQHL 232 (235)
Q Consensus 222 ~~~~~l~~~~~ 232 (235)
++|+++...|.
T Consensus 258 ~ly~~l~~~~~ 268 (279)
T 2w2e_A 258 SIWQMWKWLNY 268 (279)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHccCC
Confidence 99999876554
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=2.5e-48 Score=330.37 Aligned_cols=214 Identities=19% Similarity=0.271 Sum_probs=164.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhhhhccc--C-Cch----------hhHhHHHhhcCccccccchHHHHHHHHhccCCccch
Q 036381 1 VWRASLTEVLGTALLVFALDTIVISSI--Q-TDT----------IIAILLLATFPISGGHINPLVTFSAALIGHMTVTRA 67 (235)
Q Consensus 1 ~~r~~~~Ef~gT~~lv~~~~~~~~~~~--~-~~~----------~~~~~i~~~~~iSGah~NPavTla~~~~g~~~~~~~ 67 (235)
++|++++||+||++|+|.++++..+.. + ... ++++++++++++||+|+|||||+++++.|+++|+++
T Consensus 9 ~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~g~~~~~~~ 88 (258)
T 3c02_A 9 YVREFIGEFLGTFVLMFLGEGATANFHTTGLSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSINKFDLKKI 88 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHTTSSCGGGH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHhCCCcHHHH
Confidence 379999999999999998877553211 1 111 577889999999999999999999999999999999
Q ss_pred hhheeccchhHHHhhhhhhhhcccchhhhhcCCC-ceEEEeeccCCCCcccCCchhhHHHHHHHHHHHHHHHHHHHhhcc
Q 036381 68 AIYILAQCVGGVFGALAPKAVVSTKIEHAFSLGG-RTLIVVEQQPNGPVELGLDTGVALWLEIFCSFVFLFASMWMAFDE 146 (235)
Q Consensus 68 ~~yi~aQ~~Ga~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~E~i~T~ilv~~~~~~~~~~ 146 (235)
+.|+++|++||++|+.+++.++++++.+..+... .+. +.. ...+..++++.|+++|++|+++++.. .|+
T Consensus 89 ~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~-----~~~----~t~p~~~~~~~E~i~Tf~Lv~~i~~~-~d~ 158 (258)
T 3c02_A 89 PVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWET-----SRN----PSISLTGAFFNELILTGILLLVILVV-VDE 158 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSC-----CCC----TTSCHHHHHHHHHHHHHHHHHHHHHH-HCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcchhhhhcccccccccc-----ccC----CCCchHHHHHHHHHHHHHHHHHHHHH-hCc
Confidence 9999999999999999999999877654321110 001 111 12455679999999999999998875 455
Q ss_pred hhhhhhhhhhH-HHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh----CCCCC----CceeeeehhHHHHH
Q 036381 147 RQAKALARVSV-CIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR----GGHLW----DRHWVFWAGPATAC 217 (235)
Q Consensus 147 ~~~~~~~~~~~-~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~----g~~~~----~~~wvy~v~p~~Ga 217 (235)
|+.. ...... |+.+|+.+....+..+ ++||++||||||||||+++ |++.| +|+|+||++|++|+
T Consensus 159 ~~~~-~~~~~~~pl~IGl~v~~~~~~~g------~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga 231 (258)
T 3c02_A 159 NICG-KFHILKLSSVVGLIILCIGITFG------GNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGS 231 (258)
T ss_dssp HHHC-SCCHHHHHHHHHHHHHHHHHHHH------HHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHH
T ss_pred ccCC-cccccHHHHHHHHHHHHHHHhcc------CccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHH
Confidence 4421 122344 6777777766555543 6789999999999999997 44445 56999999999999
Q ss_pred HHHHHHHHHhcCCC
Q 036381 218 VAFALYIKLIPSQH 231 (235)
Q Consensus 218 ~~a~~~~~~l~~~~ 231 (235)
++++++||++..+|
T Consensus 232 ~la~~~y~~~~~~~ 245 (258)
T 3c02_A 232 VVFCQFYDKVICPL 245 (258)
T ss_dssp HHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHhccc
Confidence 99999999887544
No 14
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.59 E-value=2.8e-15 Score=127.24 Aligned_cols=106 Identities=15% Similarity=0.153 Sum_probs=82.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR 198 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~ 198 (235)
.+..+.++.|+++|++|+++.++.....+. ...+ .+.+++.+|+.+.+.....+ ++||+|+|||+++++++.
T Consensus 7 ~~~~~~~laEfiGT~~Lv~~g~g~~~~~~~-~~~~----~l~i~l~~Gl~v~~~i~~~g--~iSGahlNPAVTla~~~~- 78 (263)
T 2b6o_A 7 ASFWRAIFAEFFATLFYVFFGLGASLRWAP-GPLH----VLQVALAFGLALATLVQAVG--HISGAHVNPAVTFAFLVG- 78 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCCS-SSCH----HHHHHHHHHHHHHHHHHHGG--GTTCCCCSHHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCcc----hHHHHHHHHHHHHHHHHHhh--ccCcCeeChHHHHHHHHh-
Confidence 456889999999999999998877654211 1111 23455555555555555444 889999999999999996
Q ss_pred CCCCCCceeeeehhHHHHHHHHHHHHHHhcCCCC
Q 036381 199 GGHLWDRHWVFWAGPATACVAFALYIKLIPSQHL 232 (235)
Q Consensus 199 g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~~ 232 (235)
|+.+|.+.|.||++|++|+++++.+.+.+++++.
T Consensus 79 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~ 112 (263)
T 2b6o_A 79 SQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAV 112 (263)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 6678999999999999999999999999988654
No 15
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.49 E-value=2.9e-14 Score=120.22 Aligned_cols=106 Identities=18% Similarity=0.200 Sum_probs=78.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR 198 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~ 198 (235)
.+..+.++.|+++|++|++..++.+......+..+ ...+.+.+.+|+.+++.....+ ++||+++|||++++.++.
T Consensus 27 ~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~~~~--~~~l~iala~Glav~~~i~~~g--~iSGaHlNPAVTla~~~~- 101 (256)
T 3llq_A 27 YVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFPELG--IGFTGVALAFGLTVLTMAYAVG--GISGGHFNPAVSVGLTVA- 101 (256)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTC--CHHHHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC--ccHHHHHHHHHHHHHHHHheee--ccccceEchHHHHHHHHh-
Confidence 35689999999999999998887654222111111 1234555566666655555444 789999999999999996
Q ss_pred CCCCCCceeeeehhHHHHHHHHHHHHHHhcC
Q 036381 199 GGHLWDRHWVFWAGPATACVAFALYIKLIPS 229 (235)
Q Consensus 199 g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~ 229 (235)
|+.+|.+...|+++|++|+++++.+.+.+++
T Consensus 102 g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~ 132 (256)
T 3llq_A 102 GRFPASSLVPYVIAQVAGAIVAAAALYVIAT 132 (256)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 6779999999999999999999988777664
No 16
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.48 E-value=1.8e-14 Score=124.35 Aligned_cols=109 Identities=17% Similarity=0.175 Sum_probs=81.9
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhC
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRG 199 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g 199 (235)
+..+.++.|+++|++|++..++...........+.....+.+.+.+|+.+++.....+ ++||+|+|||.+++..+. |
T Consensus 59 ~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~~~~~~g~l~iala~Glav~~~v~~~g--~iSGaHlNPAVTla~~l~-g 135 (304)
T 3cn5_A 59 SFWRAAIAEFIATLLFLYITVATVIGHSKETVVCGSVGLLGIAWAFGGMIFVLVYCTA--GISGGHINPAVTFGLFLA-R 135 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSTTCSCHHHHHHHHHHHHHHHHHHHHT--TTTCCCCSHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHeEeccccCCCCCCCceeehhhhhhhhheeeeEee--ccCCCccCcHHHHHHHHh-C
Confidence 5688999999999999999887654322111111111234566666666666655555 899999999999999996 6
Q ss_pred CCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 200 GHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 200 ~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 136 ~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 167 (304)
T 3cn5_A 136 KVELLRALVYMIAQCLGAICGVGLVKAFMKGP 167 (304)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 67899999999999999999998888877654
No 17
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.46 E-value=5.3e-14 Score=122.37 Aligned_cols=109 Identities=12% Similarity=0.089 Sum_probs=84.3
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhC
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRG 199 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g 199 (235)
+.++.++.||++|++|++..++.+..... .........+.+++.+|+.+.+.....+ ++||+|+|||.+++.++. |
T Consensus 50 ~l~r~~lAEflGT~lLV~~G~Gs~a~~~~-~~~~~~~g~l~Iala~GlaV~~~v~~~g--~ISGAHlNPAVTlal~l~-G 125 (340)
T 3iyz_A 50 AFWKAVTAEFLAMLIFVLLSVGSTINWGG-SENPLPVDMVLISLCFGLSIATMVQCFG--HISGGHINPAVTVAMVCT-R 125 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCCCCCcchHHHHHHHHHHHHHheeEee--ccCcCeeChHHHHHHHHc-C
Confidence 45889999999999999998877653211 1111111245667777777777666655 899999999999999986 7
Q ss_pred CCCCCceeeeehhHHHHHHHHHHHHHHhcCCCC
Q 036381 200 GHLWDRHWVFWAGPATACVAFALYIKLIPSQHL 232 (235)
Q Consensus 200 ~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~~ 232 (235)
+..|.+...|+++|++|+++++.+.+.+++++.
T Consensus 126 ~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~ 158 (340)
T 3iyz_A 126 KISIAKSVFYITAQCLGAIIGAGILYLVTPPSV 158 (340)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 778999999999999999999988888877653
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.45 E-value=6.6e-14 Score=116.92 Aligned_cols=107 Identities=18% Similarity=0.098 Sum_probs=78.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhC
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRG 199 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g 199 (235)
+..+.++.|+++|++|++..++....++..+..+ ...+.+.+.+|+.+++.....+ ++||+|+|||.+++..+. |
T Consensus 3 ~l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~~~~--~~~l~ia~~~Gl~v~~~i~~~g--~iSGaHlNPAVTla~~~~-g 77 (234)
T 2o9g_A 3 HMFRKLAAESFGTFWLVFGGSGSAVLAAGFPELG--IGFAGVALAFGLTVLTMAFAVG--HISGGHFNPAVTIGLWAG-G 77 (234)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTTC--CHHHHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC--cChHHHHHHHHHHHHHHHHHhh--ccCcceeCHHHHHHHHHh-C
Confidence 3578899999999999998877653222111111 1134455555555555544444 789999999999999996 6
Q ss_pred CCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 200 GHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 200 ~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 78 ~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~ 109 (234)
T 2o9g_A 78 RFPAKEVVGYVIAQVVGGIVAAALLYLIASGK 109 (234)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 77899999999999999999998888777643
No 19
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.45 E-value=9.5e-14 Score=119.56 Aligned_cols=109 Identities=12% Similarity=0.093 Sum_probs=81.8
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR 198 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~ 198 (235)
.+.++.++.|+++|++|++..++.+........ +.....+.+.+.+|+.+.+.....+ ++||+|+|||.+++..+.
T Consensus 10 ~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~-~~~~~~l~iala~Glav~~~v~~~g--~iSGaHlNPAVTla~~~~- 85 (301)
T 2zz9_A 10 QAFWKAVTAEFLAMLIFVLLSVGSTINWGGSEN-PLPVDMVLISLCFGLSIATMVQCFG--HISGGHINPAVTVAMVCT- 85 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-C-CCCCCHHHHHHHHHHHHHHHHHHHG--GGTCCCCSHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccCCC-CCCcchHHHHHHHHHHHHHhhheec--cCCcceeChHHHHHHHHh-
Confidence 467899999999999999998876543221110 0011123455556665555554444 899999999999999996
Q ss_pred CCCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 199 GGHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 199 g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
|+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 86 g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~ 118 (301)
T 2zz9_A 86 RKISIAKSVFYITAQCLGAIIGAGILYLVTPPS 118 (301)
T ss_dssp SSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 778999999999999999999999998888764
No 20
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.45 E-value=3.6e-14 Score=120.12 Aligned_cols=107 Identities=15% Similarity=0.068 Sum_probs=79.2
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR 198 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~ 198 (235)
.+..+.++.|+++|++|++..++...+..+.+... ..+.+.+..|+.+++.....+ ++||+|+|||.+++..+.
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~---~~l~ia~~~Glav~~~i~~~g--~iSGaHlNPAVTla~~~~- 80 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTGLSG---DWYKLCLGWGLAVFFGILVSA--KLSGAHLNLAVSIGLSSI- 80 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTT---CHHHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCc---cHHHHHHHHHHHHHHHHheec--ccCcCeeChHHHHHHHHh-
Confidence 35688999999999999998877654322111111 133455555555555544444 789999999999999996
Q ss_pred CCCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 199 GGHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 199 g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
|+.+|.+...||++|++|+++++.+.+.+++++
T Consensus 81 g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 81 NKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp TSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 677999999999999999999998888777644
No 21
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.45 E-value=3.9e-14 Score=120.28 Aligned_cols=104 Identities=17% Similarity=0.149 Sum_probs=78.9
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVR 198 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~ 198 (235)
.+..+.++.|+++|++|++..++....+... ..+ .+.+.+.+|+.+++.....+ ++||+|+|||++++.++.
T Consensus 9 ~~~~r~~laEfiGT~~lv~~g~g~~~~~~~~-~~~----~l~ial~~Glav~~~i~~~g--~iSGaHlNPAVTla~~~~- 80 (266)
T 3d9s_A 9 VAFLKAVFAEFLATLIFVFFGLGSALKWPSA-LPT----ILQIALAFGLAIGTLAQALG--PVSGGHINPAITLALLVG- 80 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCSSS-CCC----HHHHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHHHT-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC-Ccc----HHHHHHHHHHHHHHHHHHHc--ccCcceECHHHHHHHHHh-
Confidence 4568899999999999999988876532221 112 23444555555544444433 789999999999999996
Q ss_pred CCCCCCceeeeehhHHHHHHHHHHHHHHhcCC
Q 036381 199 GGHLWDRHWVFWAGPATACVAFALYIKLIPSQ 230 (235)
Q Consensus 199 g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~ 230 (235)
|+.+|.+.+.||++|++|+++++.+.+.++++
T Consensus 81 g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~ 112 (266)
T 3d9s_A 81 NQISLLRAFFYVAAQLVGAIAGAGILYGVAPL 112 (266)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCH
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 66789999999999999999999988887754
No 22
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.45 E-value=2e-13 Score=116.66 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=81.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhh--cchh--hhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhH
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAF--DERQ--AKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPA 195 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~--~~~~--~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a 195 (235)
+..+.++.|+++|++|++..++.+. .... .+..+.....+.+++.+|+.+++.....+ ++||+|+|||.+++..
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g--~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPETPDGGSNPAQLIMISFGFGFGVMVGVFITY--RVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCGGGCCCHHHHHHHHHHHHHHHHHHHHHHT--TTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccHHHHHHHHHHHHHHHHHHHh--hcCccccChHHHHHHH
Confidence 5677899999999999998776431 1110 11111112244566667776666665555 8999999999999999
Q ss_pred HhhCCCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 196 FVRGGHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 196 ~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
+. |+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 121 ~~-g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~ 155 (279)
T 2w2e_A 121 LA-RAIPPFRGILMAFTQIVAGMAAAGAASAMTPGE 155 (279)
T ss_dssp HT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSS
T ss_pred Hc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 96 667899999999999999999999888887664
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.44 E-value=3.9e-14 Score=117.48 Aligned_cols=108 Identities=13% Similarity=0.101 Sum_probs=79.2
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHhhC
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDERQAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFVRG 199 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~~g 199 (235)
+.++.++.|+++|++|++..++.+....+.. .......+.+++..|+.+.+.....+ ++||+|+|||.+++..+. |
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~-~~~~~~~~~ia~~~Gl~v~~~v~~~g--~iSGaHlNPAVTla~~~~-g 77 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFG--HISGGHINPAVTVAMVCT-R 77 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTTT-SCCCCCHHHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCCcchHHHHHHHHHHHHHHHheec--ccccceEcHHHHHHHHHc-C
Confidence 3578899999999999999887765321111 11111134455555555555444444 789999999999999986 6
Q ss_pred CCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 200 GHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 200 ~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 78 ~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~ 109 (223)
T 3gd8_A 78 KISIAKSVFYIAAQCLGAIIGAGILYLVTPPS 109 (223)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 67899999999999999999998888877654
No 24
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.44 E-value=3.2e-13 Score=113.58 Aligned_cols=108 Identities=14% Similarity=0.079 Sum_probs=81.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcch-hhh----------hh---hhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDER-QAK----------AL---ARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAG 185 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~-~~~----------~~---~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~ 185 (235)
+..+.++.|+++|++|++..++...... .++ .. +.....+.+.+.+|+.+++.....+ ++||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g--~iSGaH 80 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALG--NISGCH 80 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHT--TTTCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheec--ccccce
Confidence 4678899999999999999876654321 110 00 0112244566777776666665555 899999
Q ss_pred cCcchhhhhHHhhCCCCCCceeeeehhHHHHHHHHHHHHHHhcCC
Q 036381 186 RNPARCLGPAFVRGGHLWDRHWVFWAGPATACVAFALYIKLIPSQ 230 (235)
Q Consensus 186 lNPAr~lg~a~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~ 230 (235)
+|||.+++..+. |+.+|.+...|+++|++|+++++.+.+.++++
T Consensus 81 ~NPAVTla~~~~-g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 124 (246)
T 2f2b_A 81 INPAVTIGLWSV-KKFPGREVVPYIIAQLLGAAFGSFIFLQCAGI 124 (246)
T ss_dssp CSHHHHHHHHHT-TSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred eCHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCc
Confidence 999999999996 67799999999999999999999888877765
No 25
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.43 E-value=1.1e-13 Score=118.02 Aligned_cols=108 Identities=19% Similarity=0.156 Sum_probs=78.1
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHhhcch----hhhhhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhH
Q 036381 120 DTGVALWLEIFCSFVFLFASMWMAFDER----QAKALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPA 195 (235)
Q Consensus 120 ~~~~~~~~E~i~T~ilv~~~~~~~~~~~----~~~~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a 195 (235)
+..+.++.|+++|++|++..++...... .++..+.....+.+++.+|+.+.+.....+ ++||+|+|||++++..
T Consensus 9 ~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g--~iSGaHlNPAVTla~~ 86 (271)
T 1j4n_A 9 LFWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVG--HISGAHLNPAVTLGLL 86 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--HHHCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHh--cCCcceEcHHHHHHHH
Confidence 5678999999999999998887654221 011111111123455555555555444444 7899999999999999
Q ss_pred HhhCCCCCCceeeeehhHHHHHHHHHHHHHHhcCC
Q 036381 196 FVRGGHLWDRHWVFWAGPATACVAFALYIKLIPSQ 230 (235)
Q Consensus 196 ~~~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~ 230 (235)
+. |+.+|.+...||++|++|+++++.+.+.++++
T Consensus 87 ~~-g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~ 120 (271)
T 1j4n_A 87 LS-CQISVLRAIMYIIAQCVGAIVATAILSGITSS 120 (271)
T ss_dssp HT-TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred Hc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 96 66789999999999999999999888777643
No 26
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.39 E-value=1.8e-13 Score=117.19 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=77.6
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHhhcchhhh-hhhhhhHHHHHHHHHHHHHHHHhhhccCCCCCCCCcCcchhhhhHHh
Q 036381 119 LDTGVALWLEIFCSFVFLFASMWMAFDERQAK-ALARVSVCIILGVVLGLLIFVSTTVTAQKGYGGAGRNPARCLGPAFV 197 (235)
Q Consensus 119 ~~~~~~~~~E~i~T~ilv~~~~~~~~~~~~~~-~~~~~~~~~~ig~~~~~~v~~~~~~~~~~~~sG~~lNPAr~lg~a~~ 197 (235)
.+..+.++.|+++|++|++..++........+ ..+. +.+++.+|+.+++.....+ ++||+|+|||.+++..+.
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~~~~g~----~~ia~~~Glav~~~i~~~g--~iSGaHlNPAVTla~~~~ 78 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQ----WEISVIFGLGVAMAIYLTA--GVSGAHLNPAVTIALWLF 78 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCH----HHHHHHHHHHHHHHHHHHH--HHHCCCCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCch----HHHHHHHHHHHHHHhheec--ccCcCeeChHHHHHHHHc
Confidence 35688999999999999998876554322111 1121 2344555555555444444 789999999999999996
Q ss_pred hCCCCCCceeeeehhHHHHHHHHHHHHHHhcCCC
Q 036381 198 RGGHLWDRHWVFWAGPATACVAFALYIKLIPSQH 231 (235)
Q Consensus 198 ~g~~~~~~~wvy~v~p~~Ga~~a~~~~~~l~~~~ 231 (235)
|+.+|.+...|+++|++|+++++.+.+.+++++
T Consensus 79 -g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~ 111 (281)
T 1ldf_A 79 -ACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNL 111 (281)
T ss_dssp -SCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 777999999999999999999998877776543
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=50.00 E-value=3.1 Score=35.72 Aligned_cols=21 Identities=19% Similarity=0.351 Sum_probs=17.5
Q ss_pred cCccccccchHHHHHHHHhcc
Q 036381 41 FPISGGHINPLVTFSAALIGH 61 (235)
Q Consensus 41 ~~iSGah~NPavTla~~~~g~ 61 (235)
+.-||||++|+++++..+..+
T Consensus 9 ~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 9 AGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp CCSSHHHHHHHHHHHHHHHHT
T ss_pred cCCCHHHHHHHHHHHHHHHhC
Confidence 334789999999999999765
Done!