BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036382
(390 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 160/294 (54%), Gaps = 30/294 (10%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
+I L+++ I G++G+V+R + +VAVK+L +D A + F +EV
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL-MEQDFHAERV------NEFLREV 85
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
A+ ++L HPN+ F+GA NL I EYL G+L + L
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSI--------------------VTEYLSRGSLYRLL 125
Query: 197 IRN-RRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDSQRTLKIADFGV 253
++ R++L + + +A D+++G++YLH++ IVHRD+K+ N+L+D + T+K+ DFG+
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Query: 254 ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFA 313
+R++A GT +MAPEVL+ +P N + DVYSFG+ LWE+ P+ +L+ A
Sbjct: 186 SRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
V +AV + R EIPR +A I+ CW KRP ++ +L + S
Sbjct: 246 QVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/294 (32%), Positives = 160/294 (54%), Gaps = 30/294 (10%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
+I L+++ I G++G+V+R + +VAVK+L +D A + F +EV
Sbjct: 33 DIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKIL-MEQDFHAERV------NEFLREV 85
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
A+ ++L HPN+ F+GA NL I EYL G+L + L
Sbjct: 86 AIMKRLRHPNIVLFMGAVTQPPNLSI--------------------VTEYLSRGSLYRLL 125
Query: 197 IRN-RRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDSQRTLKIADFGV 253
++ R++L + + +A D+++G++YLH++ IVHR++K+ N+L+D + T+K+ DFG+
Sbjct: 126 HKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGL 185
Query: 254 ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFA 313
+R++A GT +MAPEVL+ +P N + DVYSFG+ LWE+ P+ +L+ A
Sbjct: 186 SRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA 245
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
V +AV + R EIPR +A I+ CW KRP ++ +L + S
Sbjct: 246 QVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 62
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 144/309 (46%), Gaps = 45/309 (14%)
Query: 65 SRNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAE 124
+ N + ++WE++ + + M++ + G YG VY G + + V + ED M
Sbjct: 16 TENLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEV--- 72
Query: 125 TAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXX 184
F +E AV +++ HPN+ + +G L+ P +
Sbjct: 73 -----EEFLKEAAVMKEIKHPNLVQLLGVC----TLEPPFYIVT---------------- 107
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+P GNL YL R+++ +++ +A +S + YL K +HRD+ N L+
Sbjct: 108 EYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 167
Query: 245 TLKIADFGVARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGIC 296
+K+ADFG++R+ MTG+T T + + APE L ++ + DV++FG+
Sbjct: 168 VVKVADFGLSRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 220
Query: 297 LWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI M PYP + + V ++ + R E P CP + +MR CW + RP
Sbjct: 221 LWEIATYGMSPYPGIDLSQVYD-LLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFA 279
Query: 356 EVVKMLEAI 364
E + E +
Sbjct: 280 ETHQAFETM 288
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 62
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 59
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 99
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 59
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 99
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 58
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 98
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 159 SRL-------MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 212 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 62
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 138 bits (347), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 8 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 59
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 99
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 159
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 160 SRL-------MTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 212
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 213 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 19 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 70
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 110
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 170
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 171 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 223
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 224 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 282
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 7 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 58
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 98
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 158
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 159 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 211
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 212 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 138 bits (347), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 62
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 213 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 264
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 304
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HR++ N L+ +K+ADFG+
Sbjct: 305 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 364
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 365 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 417
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 418 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 10 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 61
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 101
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 161
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 162 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 214
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 215 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 55
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 95
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 39/300 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 56
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 57 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 95
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K +I +A +RG+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 96 HHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGL 154
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQ---GKPYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ PY+ + DVY+FGI L+E+ +PY
Sbjct: 155 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 214
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R +L P++ + CP + +M +C ++RP ++ +E +
Sbjct: 215 NINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL 274
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 6 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 97
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 157
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 158 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 210
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 211 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 11 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 62
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 162
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 163 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 215
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 216 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 55
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------IIEFMTYGNLL 95
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 141/300 (47%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G +G VY G + + V + ED M F
Sbjct: 4 DKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 55
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 95
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R++++ +++ +A +S + YL K +HRD+ N L+ +K+ADFG+
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGL 155
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 156 SRL-------MTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 208
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 209 SPYPGIDPSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 210 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 261
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I + E++ GNL
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIT--------------------EFMTYGNLL 301
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HR++ N L+ +K+ADFG+
Sbjct: 302 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 361
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 362 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 414
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 415 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 473
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 139/300 (46%), Gaps = 45/300 (15%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WE++ + + M++ + G YG VY G + + V + ED M F
Sbjct: 252 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV--------EEFL 303
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E AV +++ HPN+ + +G I E++ GNL
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYI--------------------ITEFMTYGNLL 343
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R+++ +++ +A +S + YL K +HR++ N L+ +K+ADFG+
Sbjct: 344 DYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGL 403
Query: 254 ARVEAQNPRDMTGETGT--------LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+R+ MTG+T T + + APE L ++ + DV++FG+ LWEI M
Sbjct: 404 SRL-------MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGM 456
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP + + V ++ ++ R E P CP + +MR CW N RP E+ + E +
Sbjct: 457 SPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 39/305 (12%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAAL 128
S+ ++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T
Sbjct: 12 SRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQ 63
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+F+ EV V +K H N+ F+G S L I + ++
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVT--------------------QWCE 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
G +L +L K +K +I +A +RG+ YLH+K I+HRD+K+ N+ L T+KI
Sbjct: 103 GSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 249 ADFGVARVEAQ--NPRDMTGETGTLGYMAPEVLQ---GKPYNRRCDVYSFGICLWEIYCC 303
DFG+A +++ +G++ +MAPEV++ PY+ + DVY+FGI L+E+
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 304 DMPYPDLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVK 359
+PY +++ D + V R +L P++ + CP + +M +C ++RP ++
Sbjct: 222 QLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
Query: 360 MLEAI 364
+E +
Sbjct: 282 EIEEL 286
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 155/305 (50%), Gaps = 39/305 (12%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAAL 128
S+ ++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T
Sbjct: 12 SRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQ 63
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+F+ EV V +K H N+ F+G S L I + ++
Sbjct: 64 LQAFKNEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCE 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
G +L +L K +K +I +A +RG+ YLH+K I+HRD+K+ N+ L T+KI
Sbjct: 103 GSSLYHHL-HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 161
Query: 249 ADFGVARVEAQ--NPRDMTGETGTLGYMAPEVLQ---GKPYNRRCDVYSFGICLWEIYCC 303
DFG+A +++ +G++ +MAPEV++ PY+ + DVY+FGI L+E+
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 304 DMPYPDLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVK 359
+PY +++ D + V R +L P++ + CP + +M +C ++RP ++
Sbjct: 222 QLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281
Query: 360 MLEAI 364
+E +
Sbjct: 282 EIEEL 286
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 45/301 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLL--DWGEDGMATTAETAALRSSFQQ 134
EID ++L + +I G +G VYR + EVAVK D ED ++ T E +Q
Sbjct: 3 EIDFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDED-ISQTIENV------RQ 55
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E ++ L HPN+ G + NL + E+ GG L +
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLKEPNLCL--------------------VMEFARGGPLNR 95
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIV---HRDVKTENMLLD--------SQ 243
L K++ I++ A+ ++RG++YLH + IV HRD+K+ N+L+ S
Sbjct: 96 VL---SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN 152
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+ LKI DFG+AR E M+ G +MAPEV++ +++ DV+S+G+ LWE+
Sbjct: 153 KILKITDFGLAR-EWHRTTKMSA-AGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
++P+ + V+ V L IP CP A +M CW+ + RP ++ L
Sbjct: 211 EVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270
Query: 364 I 364
I
Sbjct: 271 I 271
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 31 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 117
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 118 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 177 GLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 237 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
Query: 365 DTSKGG 370
++ G
Sbjct: 294 FSTFIG 299
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 30 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 116
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 117 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 175
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 176 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 236 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
Query: 365 DTSKGG 370
++ G
Sbjct: 293 FSTFIG 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 50 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 98
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 136
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 137 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 195
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 196 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 255
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 256 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
Query: 365 DTSKGG 370
++ G
Sbjct: 313 FSTFIG 318
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 24 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 72
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 110
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 111 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 169
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 170 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 229
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 230 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
Query: 365 DTSKGG 370
++ G
Sbjct: 287 FSTFIG 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 31 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 79
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 117
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 118 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 176
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 177 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 236
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 237 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
Query: 365 DTSKGG 370
++ G
Sbjct: 294 FSTFIG 299
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 51 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 99
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 137
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 138 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 196
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 197 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 256
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 257 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
Query: 365 DTSKGG 370
++ G
Sbjct: 314 FSTFIG 319
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 118
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 119 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 178 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
Query: 365 DTSKGG 370
++ G
Sbjct: 295 FSTFIG 300
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 118
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 119 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 178 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
Query: 365 DTSKGG 370
++ G
Sbjct: 295 FSTFIG 300
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 29 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 77
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 115
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 116 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 174
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 175 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 234
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 235 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
Query: 365 DTSKGG 370
++ G
Sbjct: 292 FSTFIG 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 145/306 (47%), Gaps = 55/306 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 27 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 75
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 113
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ YL SKK VHRD+ N +LD + T+K+ADF
Sbjct: 114 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADF 172
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 173 GLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 233 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
Query: 365 DTSKGG 370
++ G
Sbjct: 290 FSTFIG 295
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 37 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 85
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 86 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 123
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 124 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 182
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 183 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 242
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 243 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 299
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 300 FSTFIGEHYVHVNAT 314
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 33 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 119
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 120 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 178
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 179 GLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 239 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 296 FSTFIGEHYVHVNAT 310
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 118
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 119 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 295 FSTFIGEHYVHVNAT 309
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 32 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 80
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 118
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 119 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 177
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 178 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 237
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 238 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 295 FSTFIGEHYVHVNAT 309
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 30 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 78
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 116
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 117 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 175
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 176 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 235
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 236 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 293 FSTFIGEHYVHVNAT 307
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/315 (30%), Positives = 147/315 (46%), Gaps = 55/315 (17%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALR--------SSFQQ 134
+ +I +G +G VY GT LLD DG +L S F
Sbjct: 33 VHFNEVIGRGHFGCVYHGT---------LLD--NDGKKIHCAVKSLNRITDIGEVSQFLT 81
Query: 135 EVAVWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
E + + HPNV +G S G+ + +P Y+ G+
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGD 119
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ + IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADF
Sbjct: 120 LRNF-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADF 178
Query: 252 GVAR----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-P 306
G+AR E + + TG + +MA E LQ + + + DV+SFG+ LWE+ P
Sbjct: 179 GLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 238
Query: 307 YPDLSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
YPD++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI
Sbjct: 239 YPDVNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 295
Query: 365 DTSKGGGMIPEDQAT 379
++ G AT
Sbjct: 296 FSTFIGEHYVHVNAT 310
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/303 (31%), Positives = 147/303 (48%), Gaps = 49/303 (16%)
Query: 83 LDMRNLIAQGTYGSVYRGTY-DNQ----EVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+ +I +G +G VY GT DN AVK L+ D E S F E
Sbjct: 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD----IGEV----SQFLTEGI 142
Query: 138 VWQKLDHPNVTKFVGA---SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
+ + HPNV +G S G+ + +P Y+ G+L+
Sbjct: 143 IMKDFSHPNVLSLLGICLRSEGSPLVVLP----------------------YMKHGDLRN 180
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
+ IRN +K +I L +++G+ +L SKK VHRD+ N +LD + T+K+ADFG+A
Sbjct: 181 F-IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
Query: 255 R----VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
R E + + TG + +MA E LQ + + + DV+SFG+ LWE+ PYPD
Sbjct: 240 RDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD 299
Query: 310 LSFADVSSAVV--RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++ D++ ++ R+ L+PE CP L +M KCW AE RP E+V + AI ++
Sbjct: 300 VNTFDITVYLLQGRRLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356
Query: 368 KGG 370
G
Sbjct: 357 FIG 359
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 52
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYSTA-PQLAIVT--------------------QWCEGSSLY 91
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 365 DTS 367
S
Sbjct: 271 ARS 273
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 130 bits (328), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 58 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 96
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 97 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 156 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 216 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
Query: 365 DTS 367
S
Sbjct: 276 ARS 278
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 57
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 58 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 96
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 97 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 155
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 156 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 215
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 216 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 275
Query: 365 DTS 367
S
Sbjct: 276 ARS 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 80
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 81 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 119
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 120 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 179 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 239 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
Query: 365 DTS 367
S
Sbjct: 299 ARS 301
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 28 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 79
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 80 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 118
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 119 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 177
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 178 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 237
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 238 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 297
Query: 365 DTS 367
S
Sbjct: 298 ARS 300
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 52
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 91
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 365 DTS 367
S
Sbjct: 271 ARS 273
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 157/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 54
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 55 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 93
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 94 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 152
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A V+++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 153 ATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 212
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 213 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 272
Query: 365 DTS 367
S
Sbjct: 273 ARS 275
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 141/295 (47%), Gaps = 37/295 (12%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
W +++ +L + I +G +G V G Y +VAVK + + A +F E
Sbjct: 16 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 64
Query: 136 VAVWQKLDHPNVTKFVGASVG-TSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
+V +L H N+ + +G V L I + EY+ G+L
Sbjct: 65 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVT--------------------EYMAKGSLVD 104
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
YL R L +++ +LD+ + YL VHRD+ N+L+ K++DFG+
Sbjct: 105 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Query: 255 RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPDLSFA 313
+ EA + +D TG+ + + APE L+ K ++ + DV+SFGI LWEIY +PYP +
Sbjct: 165 K-EASSTQD-TGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 221
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSK 368
DV V + + + P CP ++ +M+ CW +A RP ++ + LE I T +
Sbjct: 222 DVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 138/294 (46%), Gaps = 35/294 (11%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
W +++ +L + I +G +G V G Y +VAVK + + A +F E
Sbjct: 1 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 49
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
+V +L H N+ + +G V EY+ G+L Y
Sbjct: 50 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 90
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L R L +++ +LD+ + YL VHRD+ N+L+ K++DFG+ +
Sbjct: 91 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 150
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPDLSFAD 314
EA + +D TG+ + + APE L+ K ++ + DV+SFGI LWEIY +PYP + D
Sbjct: 151 -EASSTQD-TGKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 207
Query: 315 VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSK 368
V V + + + P CP ++ +M+ CW +A RP ++ + LE I T +
Sbjct: 208 VVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 141/297 (47%), Gaps = 41/297 (13%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
W +++ +L + I +G +G V G Y +VAVK + + A +F E
Sbjct: 188 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 236
Query: 136 VAVWQKLDHPNVTKFVGASVG-TSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
+V +L H N+ + +G V L I + EY+ G+L
Sbjct: 237 ASVMTQLRHSNLVQLLGVIVEEKGGLYIVT--------------------EYMAKGSLVD 276
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
YL R L +++ +LD+ + YL VHRD+ N+L+ K++DFG+
Sbjct: 277 YLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Query: 255 RVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPDLS 311
+ EA + +D TG L + APE L+ K ++ + DV+SFGI LWEIY +PYP +
Sbjct: 337 K-EASSTQD----TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391
Query: 312 FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSK 368
DV V + + + P CP ++ ++M+ CW +A RP ++ + LE I T +
Sbjct: 392 LKDVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAA-- 127
PK++W ++ L + I +G +G V+ G DN VAVK + ET
Sbjct: 105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK----------SCRETLPPD 154
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L++ F QE + ++ HPN+ + +G + I E +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI--------------------VMELV 194
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLK 247
GG+ +L R +L +K ++Q+ D + G+ YL SK +HRD+ N L+ + LK
Sbjct: 195 QGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 248 IADFGVARVEAQNPRDMTG--ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
I+DFG++R EA +G + + APE L Y+ DV+SFGI LWE +
Sbjct: 254 ISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP+LS + V + R P CP ++ +M +CW +RP + + L++I
Sbjct: 314 SPYPNLS-NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 156/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 29 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 80
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 81 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 119
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 120 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 178
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A +++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 179 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 238
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 239 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 298
Query: 365 DTS 367
S
Sbjct: 299 ARS 301
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAA-- 127
PK++W ++ L + I +G +G V+ G DN VAVK + ET
Sbjct: 105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVK----------SCRETLPPD 154
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L++ F QE + ++ HPN+ + +G + I E +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI--------------------VMELV 194
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLK 247
GG+ +L R +L +K ++Q+ D + G+ YL SK +HRD+ N L+ + LK
Sbjct: 195 QGGDFLTFL-RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLK 253
Query: 248 IADFGVARVEAQNPRDMTG--ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
I+DFG++R EA +G + + APE L Y+ DV+SFGI LWE +
Sbjct: 254 ISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGA 313
Query: 306 -PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PYP+LS + V + R P CP ++ +M +CW +RP + + L++I
Sbjct: 314 SPYPNLS-NQQTREFVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 128 bits (321), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 156/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 21 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 72
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 73 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 111
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 112 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 170
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A +++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 171 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 230
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 231 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 290
Query: 365 DTS 367
S
Sbjct: 291 ARS 293
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 127 bits (320), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 156/303 (51%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
++WEI ++ + I G++G+VY+G + +VAVK+L+ TA T +F+
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLN-------VTAPTPQQLQAFK 52
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
EV V +K H N+ F+G S L I + ++ G +L
Sbjct: 53 NEVGVLRKTRHVNILLFMGYST-KPQLAIVT--------------------QWCEGSSLY 91
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L K +K+ I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+
Sbjct: 92 HHLHIIETKFEMIKL-IDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGL 150
Query: 254 ARVEAQ--NPRDMTGETGTLGYMAPEVLQGK---PYNRRCDVYSFGICLWEIYCCDMPYP 308
A +++ +G++ +MAPEV++ + PY+ + DVY+FGI L+E+ +PY
Sbjct: 151 ATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS 210
Query: 309 DLSFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ D + V R L P++ + CP ++ +M +C ++RP +++ +E +
Sbjct: 211 NINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELL 270
Query: 365 DTS 367
S
Sbjct: 271 ARS 273
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 156/301 (51%), Gaps = 39/301 (12%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
WEI+ S++ + I G++G+VY+G + +VAVK+L T +F+ E
Sbjct: 31 WEIEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK-------VVDPTPEQFQAFRNE 82
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
VAV +K H N+ F+G + NL I + ++ G +L ++
Sbjct: 83 VAVLRKTRHVNILLFMGY-MTKDNLAIVT--------------------QWCEGSSLYKH 121
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L + K + +I +A ++G+ YLH+K I+HRD+K+ N+ L T+KI DFG+A
Sbjct: 122 L-HVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLAT 180
Query: 256 VEAQ--NPRDMTGETGTLGYMAPEVLQ---GKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
V+++ + + TG++ +MAPEV++ P++ + DVYS+GI L+E+ ++PY +
Sbjct: 181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
Query: 311 SFAD-VSSAVVRQNLRPEIPRC---CPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDT 366
+ D + V R P++ + CP ++ ++ C E+RP +++ +E +
Sbjct: 241 NNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300
Query: 367 S 367
S
Sbjct: 301 S 301
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 137/294 (46%), Gaps = 35/294 (11%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
W +++ +L + I +G +G V G Y +VAVK + + A +F E
Sbjct: 7 WALNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCI-----------KNDATAQAFLAE 55
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
+V +L H N+ + +G V EY+ G+L Y
Sbjct: 56 ASVMTQLRHSNLVQLLGVIVEEKG-------------------GLYIVTEYMAKGSLVDY 96
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L R L +++ +LD+ + YL VHRD+ N+L+ K++DFG+ +
Sbjct: 97 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK 156
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPDLSFAD 314
EA + +D TG+ + + APE L+ ++ + DV+SFGI LWEIY +PYP + D
Sbjct: 157 -EASSTQD-TGKL-PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD 213
Query: 315 VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSK 368
V V + + + P CP ++ +M+ CW +A RP ++ + LE I T +
Sbjct: 214 VVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 266
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 46/292 (15%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
ID ++++ ++ +G +G V + + ++VA+K + E+ + R +F E+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-----------ESESERKAFIVELR 54
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+++HPN+ K GA + L + EY GG+L Y +
Sbjct: 55 QLSRVNHPNIVKLYGACLNPVCLVM----------------------EYAEGGSL--YNV 90
Query: 198 RNRRKKLALKIV---IQLALDLSRGLSYLHS---KKIVHRDVKTENMLLDSQRT-LKIAD 250
+ + L + L S+G++YLHS K ++HRD+K N+LL + T LKI D
Sbjct: 91 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG A + Q MT G+ +MAPEV +G Y+ +CDV+S+GI LWE+ P+ ++
Sbjct: 151 FGTA-CDIQT--HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
Query: 311 SFADVSSA-VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
V RP + + P + ++M +CW + +RP M E+VK++
Sbjct: 208 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 143/292 (48%), Gaps = 46/292 (15%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
ID ++++ ++ +G +G V + + ++VA+K + E+ + R +F E+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQI-----------ESESERKAFIVELR 53
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+++HPN+ K GA + L + EY GG+L Y +
Sbjct: 54 QLSRVNHPNIVKLYGACLNPVCLVM----------------------EYAEGGSL--YNV 89
Query: 198 RNRRKKLALKIV---IQLALDLSRGLSYLHS---KKIVHRDVKTENMLLDSQRT-LKIAD 250
+ + L + L S+G++YLHS K ++HRD+K N+LL + T LKI D
Sbjct: 90 LHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG A + Q MT G+ +MAPEV +G Y+ +CDV+S+GI LWE+ P+ ++
Sbjct: 150 FGTA-CDIQT--HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
Query: 311 SFADVSSA-VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
V RP + + P + ++M +CW + +RP M E+VK++
Sbjct: 207 GGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 144/297 (48%), Gaps = 41/297 (13%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAV 138
++++ I +G +G V++G D VA+K L G+ T E FQ+EV +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET--EMIEKFQEFQREVFI 76
Query: 139 WQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L+HPN+ K G + P + E++P G+L L+
Sbjct: 77 MSNLNHPNIVKLYGL------MHNPPRMV----------------MEFVPCGDLYHRLL- 113
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDS-----QRTLKIADF 251
++ + + ++L LD++ G+ Y+ ++ IVHRD+++ N+ L S K+ADF
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 252 GVARVEAQNPRDMTGETGTLGYMAPEVL--QGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
G+++ Q+ ++G G +MAPE + + + Y + D YSF + L+ I + P+ +
Sbjct: 174 GLSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 310 LSFADVS--SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
S+ + + + + LRP IP CP L N++ CW + +KRP +VK L +
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 121 bits (303), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 143/297 (48%), Gaps = 41/297 (13%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAV 138
++++ I +G +G V++G D VA+K L G+ T E FQ+EV +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET--EMIEKFQEFQREVFI 76
Query: 139 WQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L+HPN+ K G + P + E++P G+L L+
Sbjct: 77 MSNLNHPNIVKLYGL------MHNPPRMV----------------MEFVPCGDLYHRLL- 113
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDS-----QRTLKIADF 251
++ + + ++L LD++ G+ Y+ ++ IVHRD+++ N+ L S K+ADF
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 252 GVARVEAQNPRDMTGETGTLGYMAPEVL--QGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
G ++ Q+ ++G G +MAPE + + + Y + D YSF + L+ I + P+ +
Sbjct: 174 GTSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 310 LSFADVS--SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
S+ + + + + LRP IP CP L N++ CW + +KRP +VK L +
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 7 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 102
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++
Sbjct: 103 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 162
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 163 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 222
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N + RP E+V
Sbjct: 223 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 281
Query: 360 MLE 362
+L+
Sbjct: 282 LLK 284
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 105
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 166 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N + RP E+V
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
Query: 360 MLE 362
+L+
Sbjct: 285 LLK 287
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 139/300 (46%), Gaps = 43/300 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EID+S + + +I G +G V G VA+K L G T R
Sbjct: 29 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--------TEKQRRD 80
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPNV G ++ + I E++ G+
Sbjct: 81 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMI--------------------ITEFMENGS 120
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L ++ G+ YL VHRD+ N+L++S K++DF
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 252 GVARVEAQNPRDMTGETGTLG------YMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
G++R + D T T LG + APE +Q + + DV+S+GI +WE+ +
Sbjct: 180 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY D++ DV +A + Q+ R P CPS+L +M CW + RP+ G++V L+ +
Sbjct: 239 RPYWDMTNQDVINA-IEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 139/303 (45%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 105
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 166 DFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N RP E+V
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 360 MLE 362
+L+
Sbjct: 285 LLK 287
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 143/297 (48%), Gaps = 41/297 (13%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAV 138
++++ I +G +G V++G D VA+K L G+ T E FQ+EV +
Sbjct: 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGET--EMIEKFQEFQREVFI 76
Query: 139 WQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L+HPN+ K G + P + E++P G+L L+
Sbjct: 77 MSNLNHPNIVKLYGL------MHNPPRMV----------------MEFVPCGDLYHRLL- 113
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDS-----QRTLKIADF 251
++ + + ++L LD++ G+ Y+ ++ IVHRD+++ N+ L S K+ADF
Sbjct: 114 DKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
Query: 252 GVARVEAQNPRDMTGETGTLGYMAPEVL--QGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
+++ Q+ ++G G +MAPE + + + Y + D YSF + L+ I + P+ +
Sbjct: 174 SLSQ---QSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDE 230
Query: 310 LSFADVS--SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
S+ + + + + LRP IP CP L N++ CW + +KRP +VK L +
Sbjct: 231 YSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 119 bits (297), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 105
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 166 DFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N + RP E+V
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
Query: 360 MLE 362
+L+
Sbjct: 285 LLK 287
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 38/303 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI + + + G +G V+ G Y+N +VAVK L G M+ A
Sbjct: 5 KDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQA-------- 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E + + L H + + + I + EY+ G+
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIIT--------------------EYMAKGS 94
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L + K+ L +I + ++ G++Y+ K +HRD++ N+L+ KIADF
Sbjct: 95 LLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADF 154
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G+ARV N + T G + + APE + + + DV+SFGI L+EI +PY
Sbjct: 155 GLARVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + ADV +A+ + P + CP L +IM+ CW AE+RP + +L+ T+
Sbjct: 213 PGRTNADVMTALSQGYRMPRVEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTA 271
Query: 368 KGG 370
G
Sbjct: 272 TEG 274
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 118 bits (296), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 140/303 (46%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 105
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 165
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 166 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N + RP E+V
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
Query: 360 MLE 362
+L+
Sbjct: 285 LLK 287
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVREK 57
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 96
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 97 LRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 156 GLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + R +P CP +L ++M KCW + +RP E+ L I
Sbjct: 216 VKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 62
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 63 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 101
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 102 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 160
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 161 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 220
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 221 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 7 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 60
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 61 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 99
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 100 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 158
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 159 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 218
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 219 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 43/300 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EID+S + + +I G +G V RG VA+K L G T R
Sbjct: 12 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY--------TERQRRE 63
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + +HPN+ + G + + I E++ G
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMI--------------------LTEFMENGA 103
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L N + +++V L ++ G+ YL VHRD+ N+L++S K++DF
Sbjct: 104 LDSFLRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDF 162
Query: 252 GVARVEAQNPRDMTGETGTLG------YMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
G++R +N D T ET +LG + APE + + + D +S+GI +WE+ +
Sbjct: 163 GLSRFLEENSSDPT-ETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 221
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY D+S DV +A + Q+ R P CP+SL +M CW + RP +VV L+ +
Sbjct: 222 RPYWDMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 32 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 85
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 86 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 124
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 125 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 183
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 184 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 243
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 244 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 297
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 6 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 60 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 99 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 157
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 158 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 217
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 218 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 271
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 1 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 55 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 93
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 94 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 152
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 153 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 212
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 213 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 54
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 55 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 93
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 94 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 152
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 153 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 213 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPS 271
Query: 354 MGEVV 358
E++
Sbjct: 272 FLEII 276
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAI------KTCKNCTSDSVREK 57
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 96
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 97 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + R +P CP +L ++M KCW + +RP E+ L I
Sbjct: 216 VKNNDVIGR-IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 39/295 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQQEV 136
ID S+L I G +G V+ G + N++ VA+K T E A F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 53
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HP + + G + + + + E++ G L YL
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICL--------------------VFEFMEHGCLSDYL 93
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+ R
Sbjct: 94 -RTQRGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 257 EAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDLSF 312
+ T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY + S
Sbjct: 153 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++V + R PR + + IM CW E RP +++ L AI S
Sbjct: 211 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVREK 437
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 438 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 476
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 477 LRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 535
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 596 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVREK 57
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 96
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ S +K+ DF
Sbjct: 97 LRSFL-QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDF 155
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 216 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 136/298 (45%), Gaps = 39/298 (13%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQ 133
+W ID S+L I G +G V+ G + N++ VA+K T E A F
Sbjct: 2 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFI 51
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E V KL HP + + G + + + + + E++ G L
Sbjct: 52 EEAEVMMKLSHPKLVQLYGVCLEQAPICLVT--------------------EFMEHGCLS 91
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+
Sbjct: 92 DYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 150
Query: 254 ARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPD 309
R + T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY +
Sbjct: 151 TRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 208
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
S ++V + R PR + + IM CW E RP +++ L I S
Sbjct: 209 RSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 63
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 102
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 103 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 161
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPS 280
Query: 354 MGEVV 358
E++
Sbjct: 281 FLEII 285
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 140/305 (45%), Gaps = 45/305 (14%)
Query: 67 NESQRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTA 123
++ Q+P K+ WEI L + + G +G V+ TY+ +VAVK + G M+ A
Sbjct: 166 SKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEA 223
Query: 124 ETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXX 183
F E V + L H + K + A V + I
Sbjct: 224 --------FLAEANVMKTLQHDKLVK-LHAVVTKEPIYI--------------------I 254
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
E++ G+L +L + K L +I + ++ G++++ + +HRD++ N+L+ +
Sbjct: 255 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 314
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KIADFG+ARV A+ P + + APE + + + DV+SFGI L EI
Sbjct: 315 LVCKIADFGLARVGAKFP---------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTY 365
Query: 304 D-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
+PYP +S +V A+ R P P CP L NIM +CW E+RP + +L+
Sbjct: 366 GRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424
Query: 363 AIDTS 367
T+
Sbjct: 425 DFYTA 429
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 39/298 (13%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQ 133
+W ID S+L I G +G V+ G + N++ VA+K T E A F
Sbjct: 4 KWVIDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFI 53
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E V KL HP + + G + + + + E++ G L
Sbjct: 54 EEAEVMMKLSHPKLVQLYGVCLEQAPICL--------------------VFEFMEHGCLS 93
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+
Sbjct: 94 DYL-RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGM 152
Query: 254 ARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPD 309
R + T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY +
Sbjct: 153 TRFVLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYEN 210
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
S ++V + R PR + + IM CW E RP +++ L I S
Sbjct: 211 RSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 8 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 59
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 60 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 98
Query: 186 YLPGGNLKQYLIRNRRKKLA---------LKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R +A L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 99 LMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 157
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 158 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 217
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 218 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPS 276
Query: 354 MGEVV 358
E++
Sbjct: 277 FLEII 281
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 139/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 69
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 108
Query: 186 YLPGGNLKQYLIRNRRKKLA---------LKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R +A L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 109 LMTRGDLKSYL-RSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 167
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS 286
Query: 354 MGEVV 358
E++
Sbjct: 287 FLEII 291
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 43/300 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EID+S + + +I G +G V G VA+K L G T R
Sbjct: 3 EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY--------TEKQRRD 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPNV G ++ + I + E++ G+
Sbjct: 55 FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIIT--------------------EFMENGS 94
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L ++ G+ YL VHR + N+L++S K++DF
Sbjct: 95 LDSFLRQNDGQFTVIQLVGMLR-GIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDF 153
Query: 252 GVARVEAQNPRDMTGETGTLG------YMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
G++R + D T T LG + APE +Q + + DV+S+GI +WE+ +
Sbjct: 154 GLSRFLEDDTSDPT-YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY D++ DV +A+ Q+ R P CPS+L +M CW + RP+ G++V L+ +
Sbjct: 213 RPYWDMTNQDVINAI-EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 141/308 (45%), Gaps = 41/308 (13%)
Query: 67 NESQRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTA 123
++ Q+P K+ WEI L + + G +G V+ TY+ +VAVK + G M+ A
Sbjct: 172 SKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEA 229
Query: 124 ETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXX 183
F E V + L H + K + A V + I
Sbjct: 230 --------FLAEANVMKTLQHDKLVK-LHAVVTKEPIYI--------------------I 260
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
E++ G+L +L + K L +I + ++ G++++ + +HRD++ N+L+ +
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSAS 320
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
KIADFG+ARV N + T G + + APE + + + DV+SFGI L EI
Sbjct: 321 LVCKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEI 378
Query: 301 YCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+PYP +S +V A+ R P P CP L NIM +CW E+RP +
Sbjct: 379 VTYGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQS 437
Query: 360 MLEAIDTS 367
+L+ T+
Sbjct: 438 VLDDFYTA 445
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVREK 437
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 438 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 476
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ + +K+ DF
Sbjct: 477 LRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF 535
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 596 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 11 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 106
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHR++ N ++
Sbjct: 107 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAH 166
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 167 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 226
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N RP E+V
Sbjct: 227 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 285
Query: 360 MLE 362
+L+
Sbjct: 286 LLK 288
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 137/295 (46%), Gaps = 34/295 (11%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTY---DNQEVAVKLLDWGEDGMATTAETAALRSS 131
++EI ++++ I +G +G V++G Y +N +AV + + ++R
Sbjct: 4 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAI------KTCKNCTSDSVREK 57
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE ++ DHP++ K +G V T N E G
Sbjct: 58 FLQEALTMRQFDHPHIVKLIG--VITEN-------------------PVWIIMELCTLGE 96
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L+ +L + R+ L L +I A LS L+YL SK+ VHRD+ N+L+ + +K+ DF
Sbjct: 97 LRSFL-QVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDF 155
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPD 309
G++R +E + + +MAPE + + + DV+ FG+C+WEI + P+
Sbjct: 156 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 215
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+ DV + P +P CP +L ++M KCW + +RP E+ L I
Sbjct: 216 VKNNDVIGRIENGERLP-MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 9 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 60
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 61 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 99
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 100 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 158
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 159 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 218
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 219 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPS 277
Query: 354 MGEVV 358
E++
Sbjct: 278 FLEII 282
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 12 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 63
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 64 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 102
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 103 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 161
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 162 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 222 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPS 280
Query: 354 MGEVV 358
E++
Sbjct: 281 FLEII 285
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 62
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 63 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 101
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 102 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 160
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 161 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 221 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPS 279
Query: 354 MGEVV 358
E++
Sbjct: 280 FLEII 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 139/303 (45%), Gaps = 39/303 (12%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ + + QG++G VY G N +K + T E+A+LR
Sbjct: 10 DEWEVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V + +V + +G S G L + E + G
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHG 105
Query: 191 NLKQYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
+LK YL R R L+ +IQ+A +++ G++YL++KK VHR++ N ++
Sbjct: 106 DLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAH 165
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEI 300
T+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 166 DFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI 225
Query: 301 Y-CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ PY LS V V+ + P CP + ++MR CW N RP E+V
Sbjct: 226 TSLAEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
Query: 360 MLE 362
+L+
Sbjct: 285 LLK 287
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ M + QG++G VY G VK + T E A++R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 61
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V ++ + +V + +G S G L I E + G
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------MELMTRG 100
Query: 191 NLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+ N ++
Sbjct: 101 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 159
Query: 242 SQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWE 299
T+KI DFG+ R + G G L +M+PE L+ + DV+SFG+ LWE
Sbjct: 160 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 300 IYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
I + PY LS V V+ L + P CP L +MR CW N + RP E++
Sbjct: 220 IATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 41/301 (13%)
Query: 69 SQRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAET 125
+Q+P K+ WEI L + + G +G V+ TY+ +VAVK + G M+ A
Sbjct: 1 AQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SMSVEA-- 56
Query: 126 AALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
F E V + L H + K + A V + I E
Sbjct: 57 ------FLAEANVMKTLQHDKLVK-LHAVVTKEPIYI--------------------ITE 89
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
++ G+L +L + K L +I + ++ G++++ + +HRD++ N+L+ +
Sbjct: 90 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLV 149
Query: 246 LKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
KIADFG+ARV N + T G + + APE + + + DV+SFGI L EI
Sbjct: 150 CKIADFGLARVIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
Query: 303 CD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
+PYP +S +V A+ R P P CP L NIM +CW E+RP + +L
Sbjct: 208 YGRIPYPGMSNPEVIRALERGYRMPR-PENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266
Query: 362 E 362
+
Sbjct: 267 D 267
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/305 (29%), Positives = 140/305 (45%), Gaps = 51/305 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTY-----DNQEVAVKLLDWGEDGMATTAETAAL 128
+EWE+ K+ M + QG++G VY G D E V + T E A++
Sbjct: 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRV--------AIKTVNEAASM 69
Query: 129 RS--SFQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
R F E +V ++ + +V + +G S G L I E
Sbjct: 70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------ME 108
Query: 186 YLPGGNLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
+ G+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+
Sbjct: 109 LMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAAR 167
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFG 294
N ++ T+KI DFG+ R + G G L +M+PE L+ + DV+SFG
Sbjct: 168 NCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
Query: 295 ICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI + PY LS V V+ L + P CP L +MR CW N + RP
Sbjct: 228 VVLWEIATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPS 286
Query: 354 MGEVV 358
E++
Sbjct: 287 FLEII 291
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ M + QG++G VY G VK + T E A++R
Sbjct: 11 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 67
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V ++ + +V + +G S G L I E + G
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------MELMTRG 106
Query: 191 NLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+ N ++
Sbjct: 107 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 165
Query: 242 SQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWE 299
T+KI DFG+ R + G G L +M+PE L+ + DV+SFG+ LWE
Sbjct: 166 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 225
Query: 300 IYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
I + PY LS V V+ L + P CP L +MR CW N + RP E++
Sbjct: 226 IATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 139/300 (46%), Gaps = 41/300 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ M + QG++G VY G VK + T E A++R
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 96
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V ++ + +V + +G S G L I E + G
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------MELMTRG 135
Query: 191 NLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+ N ++
Sbjct: 136 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 194
Query: 242 SQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWE 299
T+KI DFG+ R + G G L +M+PE L+ + DV+SFG+ LWE
Sbjct: 195 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 254
Query: 300 I-YCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
I + PY LS V V+ L + P CP L +MR CW N + RP E++
Sbjct: 255 IATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 43/300 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EID+S + + +I G +G V RG VA+K L G T R
Sbjct: 10 EIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY--------TERQRRE 61
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + +HPN+ + G + + I E++ G
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMI--------------------LTEFMENGA 101
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L N + +++V L ++ G+ YL VHRD+ N+L++S K++DF
Sbjct: 102 LDSFLRLNDGQFTVIQLVGMLR-GIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDF 160
Query: 252 GVARVEAQNPRDMTGETGTLG------YMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
G++R +N D T T +LG + APE + + + D +S+GI +WE+ +
Sbjct: 161 GLSRFLEENSSDPT-YTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 219
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY D+S DV +A + Q+ R P CP+SL +M CW + RP +VV L+ +
Sbjct: 220 RPYWDMSNQDVINA-IEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 138/300 (46%), Gaps = 38/300 (12%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSSFQQ 134
WEI + + + G +G V+ G Y+N +VAVK L G M+ A F +
Sbjct: 7 WEIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQA--------FLE 56
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E + + L H + + + I + E++ G+L
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIIT--------------------EFMAKGSLLD 96
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
+L + K+ L +I + ++ G++Y+ K +HRD++ N+L+ KIADFG+A
Sbjct: 97 FLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
Query: 255 RVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDL 310
RV N + T G + + APE + + + +V+SFGI L+EI +PYP
Sbjct: 157 RVIEDN--EYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGR 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGG 370
+ ADV SA+ + P + CP L +IM+ CW AE+RP + +L+ T+ G
Sbjct: 215 TNADVMSALSQGYRMPRMEN-CPDELYDIMKMCWKEKAEERPTFDYLQSVLDDFYTATEG 273
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 138/300 (46%), Gaps = 41/300 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--S 131
+EWE+ K+ M + QG++G VY G VK + T E A++R
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKG---VVKDEPETRVAIKTVNEAASMRERIE 61
Query: 132 FQQEVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E +V ++ + +V + +G S G L I E + G
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVI---------------------MELMTRG 100
Query: 191 NLKQYLIRNRRKKL---------ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+LK YL R+ R ++ +L +IQ+A +++ G++YL++ K VHRD+ N +
Sbjct: 101 DLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVA 159
Query: 242 SQRTLKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWE 299
T+KI DFG+ R + G G L +M+PE L+ + DV+SFG+ LWE
Sbjct: 160 EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE 219
Query: 300 IYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
I + PY LS V V+ L + P CP L +MR CW N + RP E++
Sbjct: 220 IATLAEQPYQGLSNEQVLRFVMEGGLLDK-PDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD---NQE--VAVKLLDWGEDGMATTAETAALRSS 131
EID S + + +I G +G V G +E VA+K L G T R
Sbjct: 25 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY--------TDKQRRD 76
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ G + I + EY+ G+
Sbjct: 77 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIIT--------------------EYMENGS 116
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L + G+ YL VHRD+ N+L++S K++DF
Sbjct: 117 LDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDF 175
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P G + + APE + + + DV+S+GI +WE+ + PY
Sbjct: 176 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 235
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
D+S DV A + + R P CP +L +M CW RP+ G++V ML+ +
Sbjct: 236 WDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 291
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD---NQE--VAVKLLDWGEDGMATTAETAALRSS 131
EID S + + +I G +G V G +E VA+K L G T R
Sbjct: 4 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY--------TDKQRRD 55
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ G + I + EY+ G+
Sbjct: 56 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIIT--------------------EYMENGS 95
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L + G+ YL VHRD+ N+L++S K++DF
Sbjct: 96 LDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDF 154
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P G + + APE + + + DV+S+GI +WE+ + PY
Sbjct: 155 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 214
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
D+S DV A + + R P CP +L +M CW RP+ G++V ML+ +
Sbjct: 215 WDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 270
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQQEV 136
ID S+L I G +G V+ G + N++ VA+K T E A F +E
Sbjct: 4 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 53
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HP + + G + + + + E++ G L YL
Sbjct: 54 EVMMKLSHPKLVQLYGVCLEQAPICL--------------------VFEFMEHGCLSDYL 93
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+ R
Sbjct: 94 -RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 257 EAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDLSF 312
+ T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY + S
Sbjct: 153 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 210
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++V + R PR + + IM CW E RP +++ L I S
Sbjct: 211 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD---NQE--VAVKLLDWGEDGMATTAETAALRSS 131
EID S + + +I G +G V G +E VA+K L G T R
Sbjct: 10 EIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY--------TDKQRRD 61
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ G + I + EY+ G+
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIIT--------------------EYMENGS 101
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L + G+ YL VHRD+ N+L++S K++DF
Sbjct: 102 LDAFLRKNDGRFTVIQLVGMLR-GIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDF 160
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P G + + APE + + + DV+S+GI +WE+ + PY
Sbjct: 161 GMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY 220
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
D+S DV A + + R P CP +L +M CW RP+ G++V ML+ +
Sbjct: 221 WDMSNQDVIKA-IEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKL 276
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQQEV 136
ID S+L I G +G V+ G + N++ VA+K T E A F +E
Sbjct: 2 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIREGAMSEEDFIEEA 51
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HP + + G + + + + E++ G L YL
Sbjct: 52 EVMMKLSHPKLVQLYGVCLEQAPICL--------------------VFEFMEHGCLSDYL 91
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+ R
Sbjct: 92 -RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 257 EAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDLSF 312
+ T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY + S
Sbjct: 151 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 208
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++V + R PR + + IM CW E RP +++ L I S
Sbjct: 209 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EI+ S++ + +I G G V G + VA+K L G T R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--------TERQRRD 96
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G V L + EY+ G+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGV-VTRGRLAM-------------------IVTEYMENGS 136
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L R + + ++ + + G+ YL VHRD+ N+L+DS K++DF
Sbjct: 137 LDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P TG + + APE + + ++ DV+SFG+ +WE+ + PY
Sbjct: 196 GLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ DV S+ V + R P CP +L +M CW + +RP ++V +L+A+
Sbjct: 256 WNMTNRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 135/297 (45%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EI+ S++ + +I G G V G + VA+K L G T R
Sbjct: 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--------TERQRRD 96
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G V L + EY+ G+
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGV-VTRGRLAM-------------------IVTEYMENGS 136
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L R + + ++ + + G+ YL VHRD+ N+L+DS K++DF
Sbjct: 137 LDTFL-RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDF 195
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P TG + + APE + + ++ DV+SFG+ +WE+ + PY
Sbjct: 196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ DV S+ V + R P CP +L +M CW + +RP ++V +L+A+
Sbjct: 256 WNMTNRDVISS-VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 85 MRNLIAQGTYGSVYRGTYDNQE-----VAVKLLDWGEDGMATTAETAAL--RSSFQQEVA 137
+ ++ +G +G VY G Y N + VAVK T + L + F E
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVK----------TCKKDCTLDNKEKFMSEAV 65
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ + LDHP++ K +G I E P G L YL
Sbjct: 66 IMKNLDHPHIVKLIGIIEEEPTWII---------------------MELYPYGELGHYLE 104
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR-V 256
RN+ L +V+ +L + + ++YL S VHRD+ N+L+ S +K+ DFG++R +
Sbjct: 105 RNKNSLKVLTLVLY-SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADV 315
E ++ + + +M+PE + + + DV+ F +C+WEI P+ L DV
Sbjct: 164 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 223
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
+ + + P+ P CP L +M +CWD + RP E+V
Sbjct: 224 IGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 265
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 85 MRNLIAQGTYGSVYRGTYDNQE-----VAVKLLDWGEDGMATTAETAAL--RSSFQQEVA 137
+ ++ +G +G VY G Y N + VAVK T + L + F E
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVK----------TCKKDCTLDNKEKFMSEAV 61
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ + LDHP++ K +G I E P G L YL
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTWII---------------------MELYPYGELGHYLE 100
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR-V 256
RN+ L +V+ +L + + ++YL S VHRD+ N+L+ S +K+ DFG++R +
Sbjct: 101 RNKNSLKVLTLVLY-SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 159
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADV 315
E ++ + + +M+PE + + + DV+ F +C+WEI P+ L DV
Sbjct: 160 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 219
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
+ + + P+ P CP L +M +CWD + RP E+V
Sbjct: 220 IGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 261
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 85 MRNLIAQGTYGSVYRGTYDNQE-----VAVKLLDWGEDGMATTAETAAL--RSSFQQEVA 137
+ ++ +G +G VY G Y N + VAVK T + L + F E
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVK----------TCKKDCTLDNKEKFMSEAV 77
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ + LDHP++ K +G I E P G L YL
Sbjct: 78 IMKNLDHPHIVKLIGIIEEEPTWII---------------------MELYPYGELGHYLE 116
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR-V 256
RN+ L +V+ +L + + ++YL S VHRD+ N+L+ S +K+ DFG++R +
Sbjct: 117 RNKNSLKVLTLVLY-SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 175
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADV 315
E ++ + + +M+PE + + + DV+ F +C+WEI P+ L DV
Sbjct: 176 EDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV 235
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
+ + + P+ P CP L +M +CWD + RP E+V
Sbjct: 236 IGVLEKGDRLPK-PDLCPPVLYTLMTRCWDYDPSDRPRFTELV 277
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 140/291 (48%), Gaps = 35/291 (12%)
Query: 88 LIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNV 147
+I +G +G VY G Y +Q A + ++ E + +F +E + + L+HPNV
Sbjct: 28 VIGKGHFGVVYHGEYIDQ--AQNRIQCAIKSLSRITEMQQV-EAFLREGLLMRGLNHPNV 84
Query: 148 TKFVGASV---GTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
+G + G ++ +P Y+ G+L Q+ IR+ ++
Sbjct: 85 LALIGIMLPPEGLPHVLLP----------------------YMCHGDLLQF-IRSPQRNP 121
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR----VEAQN 260
+K +I L ++RG+ YL +K VHRD+ N +LD T+K+ADFG+AR E +
Sbjct: 122 TVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181
Query: 261 PRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAV 319
+ + + A E LQ + + DV+SFG+ LWE+ PY + D++ +
Sbjct: 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL 241
Query: 320 VRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGG 370
+ P+ P CP SL +M++CW+A+ RP +V +E I ++ G
Sbjct: 242 AQGRRLPQ-PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 39/295 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQE-VAVKLLDWGEDGMATTAETAALRSSFQQEV 136
ID S+L I G +G V+ G + N++ VA+K T E + F +E
Sbjct: 24 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIK----------TIKEGSMSEDDFIEEA 73
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HP + + G + + + + E++ G L YL
Sbjct: 74 EVMMKLSHPKLVQLYGVCLEQAPICL--------------------VFEFMEHGCLSDYL 113
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R +R A + ++ + LD+ G++YL ++HRD+ N L+ + +K++DFG+ R
Sbjct: 114 -RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 172
Query: 257 EAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDLSF 312
+ T TGT + + +PEV Y+ + DV+SFG+ +WE++ +PY + S
Sbjct: 173 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 230
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++V + R PR + + IM CW E RP +++ L I S
Sbjct: 231 SEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 133/297 (44%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
EI+ S + + +I G +G V G VA+K L G T R
Sbjct: 18 EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY--------TEKQRRD 69
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ G + + I + EY+ G+
Sbjct: 70 FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVT--------------------EYMENGS 109
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L +N + +++V L +S G+ YL VHRD+ N+L++S K++DF
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLR-GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 168
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P G + + APE + + + DV+S+GI +WE+ + PY
Sbjct: 169 GLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPY 228
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+++ DV A V + R P CP++L +M CW RP+ E+V ML+ +
Sbjct: 229 WEMTNQDVIKA-VEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG+ARV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS--SFQQ 134
E+ K+ + + QG++G VY G N +K + T E+A+LR F
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEG---NARDIIKGEAETRVAVKTVNESASLRERIEFLN 68
Query: 135 EVAVWQKLDHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
E +V + +V + +G S G L + E + G+LK
Sbjct: 69 EASVMKGFTCHHVVRLLGVVSKGQPTLVV---------------------MELMAHGDLK 107
Query: 194 QYLIRNR--------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YL R R L+ +IQ+A +++ G++YL++KK VHRD+ N ++ T
Sbjct: 108 SYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT 167
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLG--YMAPEVLQGKPYNRRCDVYSFGICLWEIY-C 302
+KI DFG+ R + G G L +MAPE L+ + D++SFG+ LWEI
Sbjct: 168 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 227
Query: 303 CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
+ PY LS V V+ + P CP + ++MR CW N + RP E+V +L+
Sbjct: 228 AEQPYQGLSNEQVLKFVMDGGYLDQ-PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 63
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 103
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 104 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 159
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 220 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
Query: 365 DTSKG 369
+ G
Sbjct: 279 IRNPG 283
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 80
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 81 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 120
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 121 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 176
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 177 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 236
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 237 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
Query: 365 DTSKG 369
+ G
Sbjct: 296 IRNPG 300
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 137/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 90
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 91 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 130
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 131 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 186
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 187 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 246
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 247 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
Query: 365 DTSKG 369
+ G
Sbjct: 306 IRNPG 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + EY+ G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EYMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG+ RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 40/298 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQE------VAVKLLDWGEDGMATTAETAALRS 130
EI S + + +I G +G VY+G VA+K L G T R
Sbjct: 40 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--------TEKQRV 91
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
F E + + H N+ + G + I + EY+ G
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT--------------------EYMENG 131
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L ++L R + + ++ ++ + ++ G+ YL + VHRD+ N+L++S K++D
Sbjct: 132 ALDKFL-REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSD 190
Query: 251 FGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMP 306
FG++RV +P +G + + APE + + + DV+SFGI +WE+ + P
Sbjct: 191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
Query: 307 YPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
Y +LS +V A + R P CPS++ +M +CW +RP+ ++V +L+ +
Sbjct: 251 YWELSNHEVMKA-INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 132/297 (44%), Gaps = 39/297 (13%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D S + + +I G +G V G + VA+K L G T R
Sbjct: 39 ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGY--------TEKQRRD 90
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPNV G + I E++ G
Sbjct: 91 FLCEASIMGQFDHPNVVHLEGVVTRGKPVMI--------------------VIEFMENGA 130
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L R + + ++ + ++ G+ YL VHRD+ N+L++S K++DF
Sbjct: 131 LDAFL-RKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDF 189
Query: 252 GVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPY 307
G++RV +P + TG + + APE +Q + + DV+S+GI +WE+ + PY
Sbjct: 190 GLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPY 249
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
D+S DV A + + R P CP+ L +M CW +RP+ ++V +L+ +
Sbjct: 250 WDMSNQDVIKA-IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 44/321 (13%)
Query: 65 SRNESQRPK-----EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDG 118
S ++Q+P+ +EWE+ L + + G +G V+ G Y+ +VAVK L G
Sbjct: 2 SHMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--S 59
Query: 119 MATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
M+ A F E + ++L H + + A V + I +
Sbjct: 60 MSPDA--------FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT-------------- 96
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+
Sbjct: 97 ------EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 150
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGI 295
L+ + KIADFG+AR+ N + T G + + APE + + + DV+SFGI
Sbjct: 151 LVSDTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGI 208
Query: 296 CLWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEM 354
L EI +PYP ++ +V + R R P CP L +MR CW E RP
Sbjct: 209 LLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTF 267
Query: 355 GEVVKMLEAIDTSKGGGMIPE 375
+ +LE T+ G P+
Sbjct: 268 DYLRSVLEDFFTATEGQYQPQ 288
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 70 QRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETA 126
Q+P ++EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A
Sbjct: 9 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--- 63
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
F E + ++L H + + A V + I EY
Sbjct: 64 -----FLAEANLMKQLQHQRLVRLY-AVVTQEPIYI--------------------ITEY 97
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ +
Sbjct: 98 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 157
Query: 247 KIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD- 304
KIADFG+AR +E G + + APE + + + DV+SFGI L EI
Sbjct: 158 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+PYP ++ +V + R R P CP L +MR CW E RP + +LE
Sbjct: 218 IPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
Query: 365 DTSKGGGMIPE 375
T+ G P+
Sbjct: 277 FTATEGQFQPQ 287
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 142/317 (44%), Gaps = 40/317 (12%)
Query: 67 NESQRPK-----EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMA 120
+++Q+P+ +EWE+ L + + G +G V+ G Y+ +VAVK L G M+
Sbjct: 2 SQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMS 59
Query: 121 TTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXX 180
A F E + ++L H + + A V + I
Sbjct: 60 PDA--------FLAEANLMKQLQHQRLVRLY-AVVTQEPIYI------------------ 92
Query: 181 XXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
EY+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+
Sbjct: 93 --ITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV 150
Query: 241 DSQRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE 299
+ KIADFG+AR +E G + + APE + + + DV+SFGI L E
Sbjct: 151 SDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 300 IYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
I +PYP ++ +V + R R P CP L +MR CW E RP +
Sbjct: 211 IVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLR 269
Query: 359 KMLEAIDTSKGGGMIPE 375
+LE T+ G P+
Sbjct: 270 SVLEDFFTATEGQYQPQ 286
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 39/319 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNP---RDMTGETGTLGYMAPEVLQGKPYNRRC 288
D+ N+L+ +KIADFG+AR + N ++ T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR-DINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 289 DVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDAN 347
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAV 299
Query: 348 AEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 300 PSQRPTFKQLVEDLDRILT 318
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 148/328 (45%), Gaps = 57/328 (17%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L +
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYV-------------- 118
Query: 177 XXXXXXXXEYLPGGNLKQYLIRNRR---------------KKLALKIVIQLALDLSRGLS 221
EY GNL++YL R RR +++ K ++ L+RG+
Sbjct: 119 ------IVEYASKGNLREYL-RARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGME 171
Query: 222 YLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVL 279
YL S+K +HRD+ N+L+ +KIADFG+AR + T + +MAPE L
Sbjct: 172 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEAL 231
Query: 280 QGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLAN 338
+ Y + DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L
Sbjct: 232 FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYM 290
Query: 339 IMRKCWDANAEKRPEMGEVVKMLEAIDT 366
+MR CW A +RP ++V+ L+ I T
Sbjct: 291 MMRDCWHAVPSQRPTFKQLVEDLDRILT 318
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 142/316 (44%), Gaps = 40/316 (12%)
Query: 68 ESQRPK-----EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMAT 121
++Q+P+ +EWE+ L + + G +G V+ G Y+ +VAVK L G M+
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSP 58
Query: 122 TAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXX 181
A F E + ++L H + + A V + I +
Sbjct: 59 DA--------FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT----------------- 92
Query: 182 XXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
EY+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+
Sbjct: 93 ---EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 242 SQRTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+ KIADFG+AR +E G + + APE + + + DV+SFGI L EI
Sbjct: 150 DTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEI 209
Query: 301 YCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+PYP ++ +V + R R P CP L +MR CW E RP +
Sbjct: 210 VTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 268
Query: 360 MLEAIDTSKGGGMIPE 375
+LE T+ G P+
Sbjct: 269 VLEDFFTATEGQYQPQ 284
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 148/318 (46%), Gaps = 37/318 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 182 DLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSD 241
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 242 VWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVP 300
Query: 349 EKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 301 SQRPTFKQLVEDLDRILT 318
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 82/325 (25%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+DL L + LI +G YG+VY+G+ D + VAVK+ + A R +F E
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSF------------ANRQNFINEKN 57
Query: 138 VWQK--LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
+++ ++H N+ +F+ + + + DG EY P G+L +Y
Sbjct: 58 IYRVPLMEHDNIARFI----------VGDERVTADGR-----MEYLLVMEYYPNGSLXKY 102
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSK---------KIVHRDVKTENMLLDSQRTL 246
L + ++ +LA ++RGL+YLH++ I HRD+ + N+L+ + T
Sbjct: 103 LSLHTSDWVS---SCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159
Query: 247 KIADFGVARVEAQNPRDMTG--------ETGTLGYMAPEVLQGKPYNR-------RCDVY 291
I+DFG++ N G E GT+ YMAPEVL+G R + D+Y
Sbjct: 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY 219
Query: 292 SFGICLWEIY--CCDMPYPDLS-----------------FADVSSAVVRQNLRPEIPRC- 331
+ G+ WEI+ C D+ +P S F D+ V R+ RP+ P
Sbjct: 220 ALGLIYWEIFMRCTDL-FPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW 278
Query: 332 -----CPSSLANIMRKCWDANAEKR 351
SL + CWD +AE R
Sbjct: 279 KENSLAVRSLKETIEDCWDQDAEAR 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 13 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 69
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 70 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 122
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 123 --------EYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 294 SQRPTFKQLVEDLDRI 309
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK----------EGSMSEDE 65
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 105
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 106 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R V G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 165 GLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 225 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 266
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
++++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 72
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 73 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 111
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 229
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 230 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 289
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 290 NVNQRPSFRDLALRVDQIRDNMAG 313
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + E + G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EXMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 57
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 58 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 96
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 97 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 214
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 275 NVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 92
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + E + G+
Sbjct: 93 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EXMENGS 132
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 133 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 188
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 189 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 249 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
Query: 365 DTSKG 369
+ G
Sbjct: 308 IRNPG 312
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 45/305 (14%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRG-----TYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
E+D + + + ++ G +G V G + VA+K L G T R
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--------TEKQRRD 63
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E ++ + DHPN+ + G + + I + E + G+
Sbjct: 64 FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVT--------------------EXMENGS 103
Query: 192 LKQYLIRNRRKKLALKIVIQLA---LDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L +L RK A VIQL ++ G+ YL VHRD+ N+L++S K+
Sbjct: 104 LDSFL----RKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKV 159
Query: 249 ADFGVARVEAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-D 304
+DFG++RV +P G + + +PE + + + DV+S+GI LWE+ +
Sbjct: 160 SDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
PY ++S DV A V + R P CP++L +M CW + RP+ ++V +L+ +
Sbjct: 220 RPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
Query: 365 DTSKG 369
+ G
Sbjct: 279 IRNPG 283
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 3 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMI----------KEGSMSEDE 49
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 89
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 90 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 148
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R V G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 149 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 208
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 209 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 250
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 54
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 55 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 93
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 211
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 272 NVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIIHLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 10 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 61
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 62 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 100
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 101 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 159
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 218
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 219 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 278
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 279 NVNQRPSFRDLALRVDQIRDNMAG 302
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 153/328 (46%), Gaps = 64/328 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 7 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 58
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 59 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 97
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 98 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 156
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 215
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 216 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 275
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGGGMIP 374
N +RP ++ ++ I + G++P
Sbjct: 276 NVNQRPSFRDLALRVDQIRDNM-AGLVP 302
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 8 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 59
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 60 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 98
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 99 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 157
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 216
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 217 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 276
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 277 NVNQRPSFRDLALRVDQIRDNMAG 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 54
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 55 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 93
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 211
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 272 NVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIITLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 136/303 (44%), Gaps = 49/303 (16%)
Query: 88 LIAQGTYGSVYRGTY-DNQEVAV--KLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
++ +G +G + T+ + EV V +L+ + E+ T F +EV V + L+H
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRT----------FLKEVKVMRCLEH 66
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
PNV KF+G L + EY+ GG L+ +I++ +
Sbjct: 67 PNVLKFIGVLYKDKRLNFIT--------------------EYIKGGTLRG-IIKSMDSQY 105
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV---EAQNP 261
+ A D++ G++YLHS I+HRD+ + N L+ + + +ADFG+AR+ E P
Sbjct: 106 PWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165
Query: 262 RDMTG-----------ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
+ G +MAPE++ G+ Y+ + DV+SFGI L EI PD
Sbjct: 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDY 225
Query: 311 SFADVSSAV-VRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKG 369
+ + VR L P CP S I +C D + EKRP ++ LE +
Sbjct: 226 LPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285
Query: 370 GGM 372
G +
Sbjct: 286 GHL 288
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEEDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 9 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 60
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 61 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 99
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 100 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 158
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 217
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 218 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 277
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 278 NVNQRPSFRDLALRVDQIRDNMAG 301
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 3 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 54
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 55 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 93
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 94 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 211
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 212 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 271
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 272 NVNQRPSFRDLALRVDQIRDNMAG 295
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 12 SEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 69
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 70 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 121
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 122 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 173
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 174 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 231
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 232 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 290
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 291 VPSQRPTFKQLVEDLDRILT 310
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 19 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMIK----------EGSMSEDE 65
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 105
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 106 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 164
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R V G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 165 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 224
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 225 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 266
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 34 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 85
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 86 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 124
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 125 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 183
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 242
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 243 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 302
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I G
Sbjct: 303 NVNQRPSFRDLALRVDQIRDQMAG 326
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 10 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMI----------KEGSMSEDE 56
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 96
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 97 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 155
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R V G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 156 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 215
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 216 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 257
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 137/306 (44%), Gaps = 35/306 (11%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSS 131
++EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA-------- 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E + ++L H + + A V + I + EY+ G+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGS 93
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ + KIADF
Sbjct: 94 LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPD 309
G+AR +E G + + APE + + + DV+SFGI L EI +PYP
Sbjct: 154 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKG 369
++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 214 MTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
Query: 370 GGMIPE 375
G P+
Sbjct: 273 GQYQPQ 278
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 7 SEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 64
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 65 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 116
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 117 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 168
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 169 DLTARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 226
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 227 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 285
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 286 VPSQRPTFKQLVEDLDRILT 305
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVAYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 149/324 (45%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 1 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 52
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 53 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 91
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 92 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 150
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 209
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 210 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 269
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I G
Sbjct: 270 NVNQRPSFRDLALRVDQIRDQMAG 293
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 54/304 (17%)
Query: 85 MRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
++ + +G +G V+ T D VAVK A T A R FQ+E
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVK---------ALKDPTLAARKDFQREAE 69
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL- 196
+ L H ++ KF G DG+ EY+ G+L ++L
Sbjct: 70 LLTNLQHEHIVKFYG--------------VCGDGD------PLIMVFEYMKHGDLNKFLR 109
Query: 197 -------------IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
R + +L L ++ +A ++ G+ YL S+ VHRD+ T N L+ +
Sbjct: 110 AHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN 169
Query: 244 RTLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+KI DFG++R V + + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 170 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIF 229
Query: 302 CC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKM 360
P+ LS +V + Q E PR CP + ++M CW ++R + E+ K+
Sbjct: 230 TYGKQPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKI 288
Query: 361 LEAI 364
L A+
Sbjct: 289 LHAL 292
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 259 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 308
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G+
Sbjct: 309 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VTEYMSKGS 347
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 348 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 407
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 408 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 465
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 466 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 151/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 6 DPTQFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 57
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 58 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 96
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
+LP G+L++YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 97 FLPYGSLREYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 214
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 275 NVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 9 SEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 66
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 67 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 118
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 119 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 170
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 171 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 228
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 229 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 287
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 288 VPSQRPTFKQLVEDLDRILT 307
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 123/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMI----------KEGSMSEDE 50
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 90
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 91 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R V G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 150 GLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 210 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 251
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 41/283 (14%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS 131
WEID L + G +G V +RG YD VA+K++ E +
Sbjct: 4 WEIDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMI----------KEGSMSEDE 50
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E V L H + + G + I + EY+ G
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGC 90
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DF
Sbjct: 91 LLNYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDF 149
Query: 252 GVARVEAQNPRDMT-GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPD 309
G++R + + G + + PEVL ++ + D+++FG+ +WEIY MPY
Sbjct: 150 GLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYER 209
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ ++ + + Q LR P + IM CW A++RP
Sbjct: 210 FTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 251
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 13 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 69
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 70 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 122
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 123 --------EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 294 SQRPTFKQLVEDLDRI 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 5 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 61
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 62 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 114
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 115 --------EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 166
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 226
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 227 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 285
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 286 SQRPTFKQLVEDLDRI 301
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 13 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 69
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 70 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 122
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 123 --------EYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 174
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 235 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 293
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 294 SQRPTFKQLVEDLDRI 309
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 48/308 (15%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L++ + +G +G V T + VAVK+L G AT +E A
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG----ATHSEHRA 76
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 77 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 114
Query: 188 PGGNLKQYLIRNRRKK-----------LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD+
Sbjct: 115 KFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAAR 173
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDVYSFG 294
N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV+SFG
Sbjct: 174 NILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 295 ICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI+ PYP + + +++ R P + M CW +RP
Sbjct: 234 VLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 354 MGEVVKML 361
E+V+ L
Sbjct: 294 FSELVEHL 301
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 2 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 58
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 59 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 111
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 112 --------EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 163
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 223
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 224 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 282
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 283 SQRPTFKQLVEDLDRI 298
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 149/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVGYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ +KIADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMKIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 37/316 (11%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 6 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 62
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 63 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 115
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG N ++L+ K ++ A ++RG+ YL SKK +HR
Sbjct: 116 --------EYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 167
Query: 232 DVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCD 289
D+ N+L+ +KIADFG+AR + T + +MAPE L + Y + D
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 227
Query: 290 VYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 228 VWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVP 286
Query: 349 EKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 287 SQRPTFKQLVEDLDRI 302
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 185 EYLPGGNLKQYL--------------IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVH 230
EY GNL++YL N ++L+ K ++ A ++RG+ YL SKK +H
Sbjct: 155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIH 214
Query: 231 RDVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRC 288
RD+ N+L+ +KIADFG+AR + T + +MAPE L + Y +
Sbjct: 215 RDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 289 DVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDAN 347
DV+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAV 333
Query: 348 AEKRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 334 PSQRPTFKQLVEDLDRI 350
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 149/318 (46%), Gaps = 63/318 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
++++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 21 NMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 72
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 73 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 111
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 112 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 229
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 230 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 289
Query: 347 NAEKRPEMGEVVKMLEAI 364
N +RP ++ ++ I
Sbjct: 290 NVNQRPSFRDLALRVDQI 307
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 145/325 (44%), Gaps = 55/325 (16%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGE 116
+E + P++ WE+ +L + + +G +G V +VAVK+L
Sbjct: 13 SEYELPEDPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK--- 69
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
AT + + L S + + + H N+ +GA L +
Sbjct: 70 -SDATEKDLSDLISEMEMMKMIGK---HKNIINLLGACTQDGPLYV-------------- 111
Query: 177 XXXXXXXXEYLPGGNLKQYL--------------IRNRRKKLALKIVIQLALDLSRGLSY 222
EY GNL++YL N ++L+ K ++ A ++RG+ Y
Sbjct: 112 ------IVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEY 165
Query: 223 LHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQ 280
L SKK +HRD+ N+L+ +KIADFG+AR + T + +MAPE L
Sbjct: 166 LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALF 225
Query: 281 GKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANI 339
+ Y + DV+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +
Sbjct: 226 DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMM 284
Query: 340 MRKCWDANAEKRPEMGEVVKMLEAI 364
MR CW A +RP ++V+ L+ I
Sbjct: 285 MRDCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 150/320 (46%), Gaps = 41/320 (12%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 20 SEYELPEDPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 77
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L + + AS GN
Sbjct: 78 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYVIVEYAS-KGNLR-- 129
Query: 177 XXXXXXXXEYL-----PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EYL PG + R +++ K ++ L+RG+ YL S+K +HR
Sbjct: 130 --------EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHR 181
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGT----LGYMAPEVLQGKPYNRR 287
D+ N+L+ ++IADFG+AR N D +T + +MAPE L + Y +
Sbjct: 182 DLAARNVLVTENNVMRIADFGLAR--DINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 288 CDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 240 SDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHA 298
Query: 347 NAEKRPEMGEVVKMLEAIDT 366
+RP ++V+ L+ I T
Sbjct: 299 VPSQRPTFKQLVEDLDRILT 318
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 150/329 (45%), Gaps = 59/329 (17%)
Query: 67 NESQRPKE-EWEIDLSKLDMRNLIAQGTYGSVYRGTY---------DNQEVAVKLLDWGE 116
+E + P++ +WE KL + + +G +G V + VAVK+L +
Sbjct: 66 SEYELPEDPKWEFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--D 123
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
D AT + + L S + + + H N+ +GA L +
Sbjct: 124 D--ATEKDLSDLVSEMEMMKMIGK---HKNIINLLGACTQDGPLYV-------------- 164
Query: 177 XXXXXXXXEYLPGGNLKQYLIRNRR---------------KKLALKIVIQLALDLSRGLS 221
EY GNL++YL R RR +++ K ++ L+RG+
Sbjct: 165 ------IVEYASKGNLREYL-RARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 217
Query: 222 YLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP---RDMTGETGTLGYMAPEV 278
YL S+K +HRD+ N+L+ +KIADFG+AR + N + T + +MAPE
Sbjct: 218 YLASQKCIHRDLAARNVLVTENNVMKIADFGLAR-DINNIDYYKKTTNGRLPVKWMAPEA 276
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLA 337
L + Y + DV+SFG+ +WEI+ PYP + ++ ++++ R + P C + L
Sbjct: 277 LFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELY 335
Query: 338 NIMRKCWDANAEKRPEMGEVVKMLEAIDT 366
+MR CW A +RP ++V+ L+ I T
Sbjct: 336 MMMRDCWHAVPSQRPTFKQLVEDLDRILT 364
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VIEYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPD 309
G+AR +E G + + APE + + DV+SFGI L E+ +PYP
Sbjct: 159 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPG 218
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
+ +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 219 MVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 54/315 (17%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYDN---------QEVAVKLLDWGEDGMATTAETA 126
WE+ +L + + +G +G V +VAVK+L AT + +
Sbjct: 8 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK----SDATEKDLS 63
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L S + + + H N+ +GA L + EY
Sbjct: 64 DLISEMEMMKMIGK---HKNIINLLGACTQDGPLYV--------------------IVEY 100
Query: 187 LPGGNLKQYL--------------IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL++YL N ++L+ K ++ A ++RG+ YL SKK +HRD
Sbjct: 101 ASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRD 160
Query: 233 VKTENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDV 290
+ N+L+ +KIADFG+AR + T + +MAPE L + Y + DV
Sbjct: 161 LAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV 220
Query: 291 YSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + ++ ++++ R + P C + L +MR CW A
Sbjct: 221 WSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPS 279
Query: 350 KRPEMGEVVKMLEAI 364
+RP ++V+ L+ I
Sbjct: 280 QRPTFKQLVEDLDRI 294
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 126/291 (43%), Gaps = 35/291 (12%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSSFQQE 135
E+ ++ + + G +G V G + Q +VAVK++ E + F QE
Sbjct: 4 ELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIK----------EGSMSEDEFFQE 53
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
KL HP + KF G + I + EY+ G L Y
Sbjct: 54 AQTMMKLSHPKLVKFYGVCSKEYPIYIVT--------------------EYISNGCLLNY 93
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L R+ K L ++++ D+ G+++L S + +HRD+ N L+D +K++DFG+ R
Sbjct: 94 L-RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR 152
Query: 256 -VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFA 313
V G + + APEV Y+ + DV++FGI +WE++ MPY DL
Sbjct: 153 YVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYTN 211
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
V Q R P ++ IM CW EKRP +++ +E +
Sbjct: 212 SEVVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 148/318 (46%), Gaps = 63/318 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 2 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 53
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 54 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 92
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 93 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 151
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 210
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 211 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 270
Query: 347 NAEKRPEMGEVVKMLEAI 364
N +RP ++ ++ I
Sbjct: 271 NVNQRPSFRDLALRVDQI 288
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 225
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 264
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 325 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 383 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 225
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 264
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 325 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 383 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VIEYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 134/310 (43%), Gaps = 50/310 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG----ATHSEHRA 78
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 79 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 116
Query: 188 PGGNLKQYLIRNRRKK-------------LALKIVIQLALDLSRGLSYLHSKKIVHRDVK 234
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD+
Sbjct: 117 KFGNLSTYL-RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLA 175
Query: 235 TENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDVYS 292
N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 293 FGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
FG+ LWEI+ PYP + + +++ R P + M CW +R
Sbjct: 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQR 295
Query: 352 PEMGEVVKML 361
P E+V+ L
Sbjct: 296 PTFSELVEHL 305
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 135/298 (45%), Gaps = 35/298 (11%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + G +G V+ GT++ N +VA+K L G S
Sbjct: 1 KDVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPG----------TMSPES 50
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F +E + +KL H + + A V + I + EY+ G+
Sbjct: 51 FLEEAQIMKKLKHDKLVQLY-AVVSEEPIYIVT--------------------EYMNKGS 89
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L + L L ++ +A ++ G++Y+ +HRD+++ N+L+ + KIADF
Sbjct: 90 LLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADF 149
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPD 309
G+AR +E G + + APE + + DV+SFGI L E+ +PYP
Sbjct: 150 GLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPG 209
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++ +V V R R P+ CP SL +M CW + E+RP + LE T+
Sbjct: 210 MNNREVLEQVER-GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTA 266
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 1 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 50
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 51 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 89
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 90 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 149
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 150 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 208 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 266
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 3 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 52
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 53 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 91
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 92 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 151
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 152 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 209
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 210 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 268
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VCEYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 177 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--NMSPEA-------- 226
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 227 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 265
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 266 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 325
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+ R+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 326 GLGRLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 384 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 442
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 225
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G+
Sbjct: 226 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VGEYMSKGS 264
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 265 LLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 324
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 325 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 383 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 151/309 (48%), Gaps = 52/309 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
+EW+I +L++ LI +G +G VY G + EVA++L+D D +F+
Sbjct: 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQL-------KAFK 77
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+EV +++ H NV F+GA + +L I + L G
Sbjct: 78 REVMAYRQTRHENVVLFMGACMSPPHLAIITS---------------------LCKGRTL 116
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
++R+ + L + Q+A ++ +G+ YLH+K I+H+D+K++N+ D+ + + I DFG+
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
Query: 254 ARV----EAQNPRD-MTGETGTLGYMAPEVLQ---------GKPYNRRCDVYSFGICLWE 299
+ +A D + + G L ++APE+++ P+++ DV++ G +E
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
Query: 300 IYCCDMPYPDLSFADVSSAVVRQ---NLRPEIPRC-CPSSLANIMRKCWDANAEKRPEMG 355
++ + P+ + A++ Q ++P + + +++I+ CW E+RP
Sbjct: 236 LHAREWPFK----TQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFT 291
Query: 356 EVVKMLEAI 364
+++ MLE +
Sbjct: 292 KLMDMLEKL 300
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 136/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +K+ H + + A V + I + EY+ G+
Sbjct: 60 FLQEAQVMKKIRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGS 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD+ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 141/310 (45%), Gaps = 44/310 (14%)
Query: 68 ESQRPK-----EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMAT 121
++Q+P+ +EWE+ L + + G +G V+ G Y+ +VAVK L G M+
Sbjct: 1 QTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSP 58
Query: 122 TAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXX 181
A F E + ++L H + + A V + I +
Sbjct: 59 DA--------FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT----------------- 92
Query: 182 XXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
EY+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+
Sbjct: 93 ---EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS 149
Query: 242 SQRTLKIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLW 298
+ KIADFG+AR+ N + T G + + APE + + + DV+SFGI L
Sbjct: 150 DTLSCKIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 207
Query: 299 EIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
EI +PYP ++ +V + R R P CP L +MR CW E RP +
Sbjct: 208 EIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
Query: 358 VKMLEAIDTS 367
+LE T+
Sbjct: 267 RSVLEDFFTA 276
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 48/308 (15%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L++ + +G +G V T + VAVK+L G AT +E A
Sbjct: 21 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEG----ATHSEHRA 76
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 77 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 114
Query: 188 PGGNLKQYLIRNRRKK-----------LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD+
Sbjct: 115 KFGNLSTYL-RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAAR 173
Query: 237 NMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDVYSFG 294
N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV+SFG
Sbjct: 174 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 295 ICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
+ LWEI+ PYP + + +++ R P + M CW +RP
Sbjct: 234 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT 293
Query: 354 MGEVVKML 361
E+V+ L
Sbjct: 294 FSELVEHL 301
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGC 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 37/303 (12%)
Query: 70 QRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETA 126
Q+P ++EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A
Sbjct: 1 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--- 55
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
F E + ++L H + + A V + I + EY
Sbjct: 56 -----FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EY 89
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ +
Sbjct: 90 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 149
Query: 247 KIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD- 304
KIADFG+AR +E G + + APE + + + DV+SFGI L EI
Sbjct: 150 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+PYP ++ +V + R R P CP L +MR CW E RP + +LE
Sbjct: 210 IPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
Query: 365 DTS 367
T+
Sbjct: 269 FTA 271
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 134/300 (44%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 10 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 59
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I EY+ G
Sbjct: 60 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYI--------------------VMEYMSKGC 98
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 99 LLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 158
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 159 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 217 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 275
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 37/303 (12%)
Query: 70 QRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETA 126
Q+P ++EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A
Sbjct: 2 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--- 56
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
F E + ++L H + + A V + I + EY
Sbjct: 57 -----FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EY 90
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ +
Sbjct: 91 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 150
Query: 247 KIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD- 304
KIADFG+AR +E G + + APE + + + DV+SFGI L EI
Sbjct: 151 KIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
+PYP ++ +V + R R P CP L +MR CW E RP + +LE
Sbjct: 211 IPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
Query: 365 DTS 367
T+
Sbjct: 270 FTA 272
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 70 QRP--KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETA 126
Q+P ++EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A
Sbjct: 5 QKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--- 59
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
F E + ++L H + + A V + I + EY
Sbjct: 60 -----FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EY 93
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
+ G+L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ +
Sbjct: 94 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSC 153
Query: 247 KIADFGVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KIADFG+AR+ N + T G + + APE + + + DV+SFGI L EI
Sbjct: 154 KIADFGLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH 211
Query: 304 D-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
+PYP ++ +V + R R P CP L +MR CW E RP + +LE
Sbjct: 212 GRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
Query: 363 AIDTS 367
T+
Sbjct: 271 DFFTA 275
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 150/324 (46%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L +T E
Sbjct: 4 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQ------HSTEE--H 55
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
LR F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 56 LRD-FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 94
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL +++ + +K+ +Q + +G+ YL +K+ +HR++ T N+L++++
Sbjct: 95 YLPYGSLRDYLQKHKERIDHIKL-LQYTSQICKGMEYLGTKRYIHRNLATRNILVENENR 153
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 212
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 213 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 272
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 273 NVNQRPSFRDLALRVDQIRDNMAG 296
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 131/295 (44%), Gaps = 35/295 (11%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSSFQQ 134
WEI L + + QG +G V+ GT++ VA+K L G M+ A F Q
Sbjct: 3 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA--------FLQ 52
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E V +KL H + + A V + I + EY+ G+L
Sbjct: 53 EAQVMKKLRHEKLVQLY-AVVSEEPIXIVT--------------------EYMSKGSLLD 91
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
+L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADFG+A
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 151
Query: 255 R-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDLSF 312
R +E G + + APE + + DV+SFGI L E+ +PYP +
Sbjct: 152 RLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 211
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
+V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 212 REVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 265
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 144/324 (44%), Gaps = 63/324 (19%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAA 127
D ++ + R+L + +G +GSV YD + VAVK L T
Sbjct: 6 DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---------TEE 56
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGA--SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
F++E+ + + L H N+ K+ G S G NLK+ E
Sbjct: 57 HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL--------------------IME 96
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
YLP G+L+ YL + + +K+ +Q + +G+ YL +K+ +HRD+ T N+L++++
Sbjct: 97 YLPYGSLRDYLQAHAERIDHIKL-LQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 246 LKIADFGVARVEAQNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI- 300
+KI DFG+ +V Q+ GE+ Y APE L ++ DV+SFG+ L+E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELF 214
Query: 301 -YCCDMPYPDLSFADVSS-------------AVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
Y P F + +++ N R P CP + IM +CW+
Sbjct: 215 TYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNN 274
Query: 347 NAEKRPEMGEVVKMLEAIDTSKGG 370
N +RP ++ ++ I + G
Sbjct: 275 NVNQRPSFRDLALRVDQIRDNMAG 298
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 135/311 (43%), Gaps = 51/311 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L++ + +G +G V T + VAVK+L G AT +E A
Sbjct: 22 KWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 77
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 78 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 115
Query: 188 PGGNLKQYLIRNRRKK--------------LALKIVIQLALDLSRGLSYLHSKKIVHRDV 233
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD+
Sbjct: 116 KFGNLSTYL-RSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDL 174
Query: 234 KTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDVY 291
N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVW 234
Query: 292 SFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
SFG+ LWEI+ PYP + + +++ R P + M CW +
Sbjct: 235 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQ 294
Query: 351 RPEMGEVVKML 361
RP E+V+ L
Sbjct: 295 RPTFSELVEHL 305
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 35/298 (11%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
++EWE+ L + + G +G V+ G Y+ + +VAVK L G M+ A
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA-------- 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E + ++L H + + A V + I + EY+ G+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGS 93
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ + KIADF
Sbjct: 94 LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPD 309
G+AR +E G + + APE + + + DV+SFGI L EI +PYP
Sbjct: 154 GLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 214 MTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 39/297 (13%)
Query: 76 WEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSSFQQ 134
WEI L + + QG +G V+ GT++ VA+K L G M+ A F Q
Sbjct: 2 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA--------FLQ 51
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E V +KL H + + A V + I + EY+ G+L
Sbjct: 52 EAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMSKGSLLD 90
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
+L K L L ++ +A ++ G++Y+ VHRD++ N+L+ K+ADFG+A
Sbjct: 91 FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA 150
Query: 255 RVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPYPDL 310
R+ N + T G + + APE + + DV+SFGI L E+ +PYP +
Sbjct: 151 RLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 208
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
+V V R R P CP SL ++M +CW + E+RP + LE TS
Sbjct: 209 VNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFLEDYFTS 264
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 56
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 57 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMNKGS 95
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ ++ ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 156 GLARLIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 214 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 135/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
K+ WEI L + + QG +G V+ GT++ VA+K L G M+ A
Sbjct: 7 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEA-------- 56
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F QE V +KL H + + A V + I + EY+ G+
Sbjct: 57 FLQEAQVMKKLRHEKLVQLY-AVVSEEPIYIVT--------------------EYMNKGS 95
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L K L L ++ ++ ++ G++Y+ VHRD++ N+L+ K+ADF
Sbjct: 96 LLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADF 155
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC-CDMPY 307
G+AR+ N + T G + + APE + + DV+SFGI L E+ +PY
Sbjct: 156 GLARLIEDN--EWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 213
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P + +V V R R P CP SL ++M +CW E+RP + LE TS
Sbjct: 214 PGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 272
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD-NQEVAVKLLDWGEDGMATTAETAALRSS 131
++EWE+ L + + G +G V+ G Y+ + +VAVK L G M+ A
Sbjct: 5 EDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA-------- 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E + ++L H + + A V + I + EY+ G+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGS 93
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ + KIADF
Sbjct: 94 LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 252 GVARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPY 307
G+AR+ N + T G + + APE + + + DV+SFGI L EI +PY
Sbjct: 154 GLARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
P ++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 212 PGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 270
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 135/299 (45%), Gaps = 39/299 (13%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSSF 132
+EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A F
Sbjct: 1 DEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--------F 50
Query: 133 QQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNL 192
E + ++L H + + A V + I + EY+ G+L
Sbjct: 51 LAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGSL 89
Query: 193 KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG 252
+L KL + ++ +A ++ G++++ + +HRD++ N+L+ + KIADFG
Sbjct: 90 VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFG 149
Query: 253 VARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYP 308
+AR+ N + T G + + APE + + + DV+SFGI L EI +PYP
Sbjct: 150 LARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 207
Query: 309 DLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 208 GMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 265
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IMRKCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 82 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IMRKCW +A+ RP+ E++
Sbjct: 240 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 88
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 89 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 126
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 127 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 187 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 246
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IMRKCW +A+ RP+ E++
Sbjct: 247 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 57/317 (17%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDN-------QEVAVKLLDWGEDGMATTAETA 126
+WE ++L + G +G V T VAVK+L A E
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAHLTERE 94
Query: 127 ALRSSFQQEVAVWQKL-DHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXX 184
AL S E+ V L +H N+ +GA ++G L I
Sbjct: 95 ALMS----ELKVLSYLGNHMNIVNLLGACTIGGPTLVI---------------------T 129
Query: 185 EYLPGGNLKQYLIRNRRKKLALKI----------------VIQLALDLSRGLSYLHSKKI 228
EY G+L +L R R + K ++ + +++G+++L SK
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 229 VHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNR 286
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 287 RCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWD 345
DV+S+GI LWE++ PYP + ++++ R P P+ + +IM+ CWD
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 309
Query: 346 ANAEKRPEMGEVVKMLE 362
A+ KRP ++V+++E
Sbjct: 310 ADPLKRPTFKQIVQLIE 326
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 57/317 (17%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDN-------QEVAVKLLDWGEDGMATTAETA 126
+WE ++L + G +G V T VAVK+L A E
Sbjct: 32 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAHLTERE 87
Query: 127 ALRSSFQQEVAVWQKL-DHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXX 184
AL S E+ V L +H N+ +GA ++G L I
Sbjct: 88 ALMS----ELKVLSYLGNHMNIVNLLGACTIGGPTLVI---------------------T 122
Query: 185 EYLPGGNLKQYLIRNRRKKLALKI----------------VIQLALDLSRGLSYLHSKKI 228
EY G+L +L R R + K ++ + +++G+++L SK
Sbjct: 123 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 182
Query: 229 VHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNR 286
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 183 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 287 RCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWD 345
DV+S+GI LWE++ PYP + ++++ R P P+ + +IM+ CWD
Sbjct: 243 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 302
Query: 346 ANAEKRPEMGEVVKMLE 362
A+ KRP ++V+++E
Sbjct: 303 ADPLKRPTFKQIVQLIE 319
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 58/323 (17%)
Query: 69 SQRPKEE-WEIDLSKLDMRNLIAQGTYGSVYRGTYDN-------QEVAVKLLDWGEDGMA 120
+Q P + WE ++L + G +G V T VAVK+L A
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSA 65
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXX 178
E AL S E+ V L +H N+ +GA ++G L I
Sbjct: 66 HLTEREALMS----ELKVLSYLGNHMNIVNLLGACTIGGPTLVI---------------- 105
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKI----------------VIQLALDLSRGLSY 222
EY G+L +L R R + K ++ + +++G+++
Sbjct: 106 -----TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160
Query: 223 LHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQ 280
L SK +HRD+ N+LL R KI DFG+AR + + L +MAPE +
Sbjct: 161 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 220
Query: 281 GKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANI 339
Y DV+S+GI LWE++ PYP + ++++ R P P+ + +I
Sbjct: 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 280
Query: 340 MRKCWDANAEKRPEMGEVVKMLE 362
M+ CWDA+ KRP ++V+++E
Sbjct: 281 MKTCWDADPLKRPTFKQIVQLIE 303
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 67
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 68 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------ITEFC 105
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 106 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 138/323 (42%), Gaps = 58/323 (17%)
Query: 69 SQRPKEE-WEIDLSKLDMRNLIAQGTYGSVYRGTYDN-------QEVAVKLLDWGEDGMA 120
+Q P + WE ++L + G +G V T VAVK+L A
Sbjct: 28 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSA 83
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXX 178
E AL S E+ V L +H N+ +GA ++G L I
Sbjct: 84 HLTEREALMS----ELKVLSYLGNHMNIVNLLGACTIGGPTLVI---------------- 123
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKI----------------VIQLALDLSRGLSY 222
EY G+L +L R R + K ++ + +++G+++
Sbjct: 124 -----TEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 178
Query: 223 LHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQ 280
L SK +HRD+ N+LL R KI DFG+AR + + L +MAPE +
Sbjct: 179 LASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIF 238
Query: 281 GKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANI 339
Y DV+S+GI LWE++ PYP + ++++ R P P+ + +I
Sbjct: 239 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDI 298
Query: 340 MRKCWDANAEKRPEMGEVVKMLE 362
M+ CWDA+ KRP ++V+++E
Sbjct: 299 MKTCWDADPLKRPTFKQIVQLIE 321
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 67
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 68 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 105
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 106 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 135/317 (42%), Gaps = 57/317 (17%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDN-------QEVAVKLLDWGEDGMATTAETA 126
+WE ++L + G +G V T VAVK+L A E
Sbjct: 39 HKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK----PSAHLTERE 94
Query: 127 ALRSSFQQEVAVWQKL-DHPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXX 184
AL S E+ V L +H N+ +GA ++G L I
Sbjct: 95 ALMS----ELKVLSYLGNHMNIVNLLGACTIGGPTLVI---------------------T 129
Query: 185 EYLPGGNLKQYLIRNRRKKLALKI----------------VIQLALDLSRGLSYLHSKKI 228
EY G+L +L R R + K ++ + +++G+++L SK
Sbjct: 130 EYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNC 189
Query: 229 VHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNR 286
+HRD+ N+LL R KI DFG+AR + + L +MAPE + Y
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 287 RCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWD 345
DV+S+GI LWE++ PYP + ++++ R P P+ + +IM+ CWD
Sbjct: 250 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 309
Query: 346 ANAEKRPEMGEVVKMLE 362
A+ KRP ++V+++E
Sbjct: 310 ADPLKRPTFKQIVQLIE 326
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 76
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 77 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 114
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 115 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 173
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 294 QRPTFSELVEHL 305
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 77
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + KL+H N+ + +G S+ + I E
Sbjct: 78 EL--DFLMEALIISKLNHQNIVRCIGVSLQSLPRFI--------------------LLEL 115
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 175
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 176 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 236 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 295 IILERIE 301
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 91
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + KL+H N+ + +G S+ + I E
Sbjct: 92 EL--DFLMEALIISKLNHQNIVRCIGVSLQSLPRFI--------------------LLEL 129
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 250 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 309 IILERIE 315
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 92 GTYGSVYRGTYDNQ----EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNV 147
G +GSV +G Y + +VA+K+L G + T +E + +LD+P +
Sbjct: 21 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--------EEMMREAQIMHQLDNPYI 72
Query: 148 TKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALK 207
+ +G + + + E GG L ++L+ +R+++ +
Sbjct: 73 VRLIGVCQAEALMLV---------------------MEMAGGGPLHKFLV-GKREEIPVS 110
Query: 208 IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE 267
V +L +S G+ YL K VHRD+ N+LL ++ KI+DFG+++ + T
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 170
Query: 268 TG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWE-IYCCDMPYPDLSFADVSSAVVRQN 323
+ L + APE + + ++ R DV+S+G+ +WE + PY + +V A + Q
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQG 229
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
R E P CP L +M CW E RP+ V + + A
Sbjct: 230 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 76
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 77 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 114
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 115 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 173
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 294 QRPTFSELVEHL 305
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 141/321 (43%), Gaps = 71/321 (22%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 84
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 85 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 125
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 126 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 186 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 245
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 246 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 305
Query: 349 EKRPEMGEVVKMLEAIDTSKG 369
R + K L + +G
Sbjct: 306 AARLTALRIKKTLSQLSQQEG 326
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 142/324 (43%), Gaps = 71/324 (21%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 65 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 105
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 106 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 166 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 225
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 226 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 285
Query: 349 EKRPEMGEVVKMLEAIDTSKGGGM 372
R + K L + +G M
Sbjct: 286 AARLTALRIKKTLSQLSQQEGIKM 309
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 142/324 (43%), Gaps = 71/324 (21%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 58
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 59 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 99
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 100 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 219
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 220 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 279
Query: 349 EKRPEMGEVVKMLEAIDTSKGGGM 372
R + K L + +G M
Sbjct: 280 AARLTALRIKKTLSQLSQQEGIKM 303
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 141/321 (43%), Gaps = 71/321 (22%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 59
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 60 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 100
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 101 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 161 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 220
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 221 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 280
Query: 349 EKRPEMGEVVKMLEAIDTSKG 369
R + K L + +G
Sbjct: 281 AARLTALRIKKTLSQLSQQEG 301
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 23 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 78
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 79 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 116
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 117 KFGNLSTYL-RSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 175
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 176 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 235
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 236 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 295
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 296 QRPTFSELVEHL 307
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 39/313 (12%)
Query: 68 ESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-----VAVKLLDWGEDGMATT 122
E Q E+ ID + L + ++ +G +GSV G ++ VAVK +
Sbjct: 21 ELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREI 80
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
E F E A + HPNV + +G + S+ IP +
Sbjct: 81 EE-------FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVIL------------- 120
Query: 183 XXEYLPGGNLKQYLIRNRR----KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
++ G+L YL+ +R K + L+ +++ +D++ G+ YL ++ +HRD+ N
Sbjct: 121 --PFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNC 178
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGIC 296
+L T+ +ADFG+++ G + ++A E L + Y + DV++FG+
Sbjct: 179 MLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVT 238
Query: 297 LWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
+WEI M PYP + ++ ++ + R + P C L IM CW + RP
Sbjct: 239 MWEIATRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPTFS 297
Query: 356 ----EVVKMLEAI 364
++ K+LE++
Sbjct: 298 VLRLQLEKLLESL 310
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 58 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 113
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 114 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 151
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 152 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 210
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 271 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 330
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 331 QRPTFSELVEHL 342
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 142/324 (43%), Gaps = 71/324 (21%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 61
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 62 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 102
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 103 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 163 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 222
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 223 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 282
Query: 349 EKRPEMGEVVKMLEAIDTSKGGGM 372
R + K L + +G M
Sbjct: 283 AARLTALRIKKTLSQLSQQEGIKM 306
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 142/324 (43%), Gaps = 71/324 (21%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK--LDHPN 146
I +G +G V+RG + +EVAVK+ E+ RS F+ E ++Q L H N
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIFSSREE-----------RSWFR-EAEIYQTVMLRHEN 97
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ F+ A D +Y G+L YL R + +
Sbjct: 98 ILGFIAA----------------DNKDNGTWTQLWLVSDYHEHGSLFDYL---NRYTVTV 138
Query: 207 KIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVA--RV 256
+ +I+LAL + GL++LH + I HRD+K++N+L+ T IAD G+A
Sbjct: 139 EGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
Query: 257 EAQNPRDMT--GETGTLGYMAPEVLQG----KPYN--RRCDVYSFGICLWEIY--CC--- 303
A + D+ GT YMAPEVL K + +R D+Y+ G+ WEI C
Sbjct: 199 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258
Query: 304 -----DMPYPDL-----SFADVSSAVVRQNLRPEIP---RCCPS--SLANIMRKCWDANA 348
+PY DL S ++ V Q LRP IP + C + +A IMR+CW AN
Sbjct: 259 IHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 318
Query: 349 EKRPEMGEVVKMLEAIDTSKGGGM 372
R + K L + +G M
Sbjct: 319 AARLTALRIKKTLSQLSQQEGIKM 342
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 67
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 68 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------ITEFC 105
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 106 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 135/306 (44%), Gaps = 35/306 (11%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSS 131
++ WE+ L + + G G V+ G Y+ +VAVK L G M+ A
Sbjct: 5 EDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQG--SMSPDA-------- 54
Query: 132 FQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGN 191
F E + ++L H + + A V + I + EY+ G+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGS 93
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADF 251
L +L KL + ++ +A ++ G++++ + +HRD++ N+L+ + KIADF
Sbjct: 94 LVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF 153
Query: 252 GVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPD 309
G+AR +E G + + APE + + + DV+SFGI L EI +PYP
Sbjct: 154 GLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKG 369
++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 214 MTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272
Query: 370 GGMIPE 375
G P+
Sbjct: 273 GQYQPQ 278
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 140/310 (45%), Gaps = 62/310 (20%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLL--DWGEDGMATTAETAALRSSFQQEVAVWQ 140
+ +G +G V YD + VAVK L D G RS ++QE+ + +
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQH----------RSGWKQEIDILR 88
Query: 141 KLDHPNVTKFVGAS--VGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L H ++ K+ G G ++L++ EY+P G+L+ YL R
Sbjct: 89 TLYHEHIIKYKGCCEDAGAASLQL--------------------VMEYVPLGSLRDYLPR 128
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
+ + L ++ A + G++YLH++ +HRD+ N+LLD+ R +KI DFG+A+
Sbjct: 129 H---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185
Query: 259 QNPRDMT----GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSF 312
+ G++ Y APE L+ + DV+SFG+ L+E+ +C P F
Sbjct: 186 EGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF 244
Query: 313 ADVS------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKM 360
++ + ++ + R P CP+ + ++M+ CW+ A RP ++ +
Sbjct: 245 LELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPI 304
Query: 361 LEAIDTSKGG 370
L+ + G
Sbjct: 305 LKTVHEKYQG 314
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 12 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 67
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 68 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------ITEFC 105
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 106 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 164
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 225 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 284
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 285 QRPTFSELVEHL 296
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRG-------TYDNQEVAVKLLDWGEDGMATTAETAA 127
+WE +L + + +G +G V T + VAVK+L G AT +E A
Sbjct: 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG----ATHSEHRA 76
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + + H NV +GA P V E+
Sbjct: 77 LMSELKILIHIGH---HLNVVNLLGACTK------PGGPLMV-------------IVEFC 114
Query: 188 PGGNLKQYLIRNRRKK---------------LALKIVIQLALDLSRGLSYLHSKKIVHRD 232
GNL YL R++R + L L+ +I + +++G+ +L S+K +HRD
Sbjct: 115 KFGNLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRD 173
Query: 233 VKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG--TLGYMAPEVLQGKPYNRRCDV 290
+ N+LL + +KI DFG+AR ++P + L +MAPE + + Y + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 291 YSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAE 349
+SFG+ LWEI+ PYP + + +++ R P + M CW
Sbjct: 234 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPS 293
Query: 350 KRPEMGEVVKML 361
+RP E+V+ L
Sbjct: 294 QRPTFSELVEHL 305
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 143/318 (44%), Gaps = 59/318 (18%)
Query: 77 EIDLSKLDMRNL-----IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAET 125
E+D + + R L + +G +G V YD ++VAVK L E G A+
Sbjct: 12 EVDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIAD- 69
Query: 126 AALRSSFQQEVAVWQKLDHPNVTKFVGASV--GTSNLKIPSKTASVDGNXXXXXXXXXXX 183
++E+ + + L H N+ K+ G G + +K+
Sbjct: 70 ------LKKEIEILRNLYHENIVKYKGICTEDGGNGIKL--------------------I 103
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
E+LP G+LK+YL +N+ K + LK ++ A+ + +G+ YL S++ VHRD+ N+L++S+
Sbjct: 104 MEFLPSGSLKEYLPKNKNK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESE 162
Query: 244 RTLKIADFGVARVEAQNPRDMT---GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+KI DFG+ + + T + + APE L + DV+SFG+ L E+
Sbjct: 163 HQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHEL 222
Query: 301 --YC----------CDMPYPDLSFADVSSAV--VRQNLRPEIPRCCPSSLANIMRKCWDA 346
YC M P V+ V +++ R P CP + +MRKCW+
Sbjct: 223 LTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEF 282
Query: 347 NAEKRPEMGEVVKMLEAI 364
R +++ EA+
Sbjct: 283 QPSNRTSFQNLIEGFEAL 300
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 81 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IMRKCW +A+ RP+ E++
Sbjct: 239 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 76
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 77 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LMEL 114
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 174
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 175 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 235 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 294 IILERIE 300
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 81 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IMRKCW +A+ RP+ E++
Sbjct: 239 RLPQ-PPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 40 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 93
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 94 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 131
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 132 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 191
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 192 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 251
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 252 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 310
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 311 IILERIE 317
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 91
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 92 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LMEL 129
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 250 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 309 IILERIE 315
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 15 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 68
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 69 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 106
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 107 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 166
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 167 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 226
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 227 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 285
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 286 IILERIE 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 30 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 83
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 84 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 121
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 122 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 181
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 182 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 241
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 242 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 300
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 301 IILERIE 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 77
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 78 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 115
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 175
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 176 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 236 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 295 IILERIE 301
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 134/298 (44%), Gaps = 39/298 (13%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-EVAVKLLDWGEDGMATTAETAALRSSFQ 133
EWE+ L + + G +G V+ G Y+ +VAVK L G M+ A F
Sbjct: 3 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMSPDA--------FL 52
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
E + ++L H + + A V + I + EY+ G+L
Sbjct: 53 AEANLMKQLQHQRLVRLY-AVVTQEPIYIIT--------------------EYMENGSLV 91
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+L KL + ++ +A ++ G++++ + +HR+++ N+L+ + KIADFG+
Sbjct: 92 DFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGL 151
Query: 254 ARVEAQNPRDMTGETGT---LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD-MPYPD 309
AR+ N + T G + + APE + + + DV+SFGI L EI +PYP
Sbjct: 152 ARLIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 209
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTS 367
++ +V + R R P CP L +MR CW E RP + +LE T+
Sbjct: 210 MTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA 266
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 81 SKLDMRNLIAQGTYGSVYRGTYDNQ------EVAVKLLDWGEDGMATTAETAALRSSFQQ 134
++L ++ G +G+VY+G + + VA+K+L+ TT A + F
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN------ETTGPKANV--EFMD 66
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E + +DHP++ + +G + + + +P G L +
Sbjct: 67 EALIMASMDHPHLVRLLGVCLSPT---------------------IQLVTQLMPHGCLLE 105
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
Y + + + ++++ + +++G+ YL +++VHRD+ N+L+ S +KI DFG+A
Sbjct: 106 Y-VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
Query: 255 RVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLS 311
R+ + ++ + G + +MA E + + + + DV+S+G+ +WE+ PY +
Sbjct: 165 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 224
Query: 312 FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
++ + + P+ P C + +M KCW +A+ RP+ E+
Sbjct: 225 TREIPDLLEKGERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKEL 269
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 50 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 103
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 104 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 141
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 142 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 201
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 202 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 261
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 262 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 320
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 321 IILERIE 327
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 76
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 77 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 114
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 115 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 174
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 175 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 235 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 293
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 294 IILERIE 300
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN 260
++ + ++ +I + ++RG+ +L S+K +HRD+ N+LL +KI DFG+AR +N
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN 252
Query: 261 PRDM-TGETG-TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSS 317
P + G+T L +MAPE + K Y+ + DV+S+G+ LWEI+ PYP + +
Sbjct: 253 PDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFC 312
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
+ +R+ +R P + IM CW + ++RP E+V+ L
Sbjct: 313 SRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 41 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 94
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 95 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 132
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 133 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 192
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 193 CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 252
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 253 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 311
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 312 IILERIE 318
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 12 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 67
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 106
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 107 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 164
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 165 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 224
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 225 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 278
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 4 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 59
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 98
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 99 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 156
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 157 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 216
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 217 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 270
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 81 SKLDMRNLIAQGTYGSVYRGTYDNQ------EVAVKLLDWGEDGMATTAETAALRSSFQQ 134
++L ++ G +G+VY+G + + VA+K+L+ TT A + F
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILN------ETTGPKANV--EFMD 89
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E + +DHP++ + +G + + + +P G L +
Sbjct: 90 EALIMASMDHPHLVRLLGVCLSPT---------------------IQLVTQLMPHGCLLE 128
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
Y + + + ++++ + +++G+ YL +++VHRD+ N+L+ S +KI DFG+A
Sbjct: 129 Y-VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
Query: 255 RVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLS 311
R+ + ++ + G + +MA E + + + + DV+S+G+ +WE+ PY +
Sbjct: 188 RLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP 247
Query: 312 FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
++ + + P+ P C + +M KCW +A+ RP+ E+
Sbjct: 248 TREIPDLLEKGERLPQ-PPICTIDVYMVMVKCWMIDADSRPKFKEL 292
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 356 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 411
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 450
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 451 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 508
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 509 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 568
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 569 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 622
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 14 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 69
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 108
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 109 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 166
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 226
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 227 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 14 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 69
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 108
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 109 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 166
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 167 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 226
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 227 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 280
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 38 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVYSEQD 91
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 92 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 129
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 130 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 189
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 250 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 308
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 309 IILERIE 315
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 133/295 (45%), Gaps = 33/295 (11%)
Query: 68 ESQRPKEEWEIDLSKLDMRNL-IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETA 126
E RPKE + +D L + + + G +G+V +G Y ++ + + A
Sbjct: 357 EEIRPKEVY-LDRKLLTLEDKELGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDP 412
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
AL+ E V Q+LD+P + + +G S + + E
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV---------------------MEM 451
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G L +YL +NR K K +I+L +S G+ YL VHRD+ N+LL +Q
Sbjct: 452 AELGPLNKYLQQNRHVKD--KNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA 509
Query: 247 KIADFGVA---RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI+DFG++ R + + T + + APE + ++ + DV+SFG+ +WE +
Sbjct: 510 KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 569
Query: 304 DM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
PY + ++V +A++ + R P CP + ++M CW + E RP V
Sbjct: 570 GQKPYRGMKGSEV-TAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 623
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQLIT--------------------QLMPFGXLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 121/281 (43%), Gaps = 41/281 (14%)
Query: 78 IDLSKLDMRNLIAQGTYGSV----YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
ID L + G +G V +RG YD VA+K++ E + F
Sbjct: 1 IDPKDLTFLKELGTGQFGVVKYGKWRGQYD---VAIKMI----------KEGSMSEDEFI 47
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+E V L H + + G + I + EY+ G L
Sbjct: 48 EEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT--------------------EYMANGCLL 87
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
YL R R + + ++++ D+ + YL SK+ +HRD+ N L++ Q +K++DFG+
Sbjct: 88 NYL-REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGL 146
Query: 254 AR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLS 311
+R V G + + PEVL ++ + D+++FG+ +WEIY MPY +
Sbjct: 147 SRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 206
Query: 312 FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
++ + + Q LR P + IM CW A++RP
Sbjct: 207 NSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERP 246
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 64 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 117
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 118 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 155
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 215
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+AR A R + +M PE + + D +SFG+
Sbjct: 216 CPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 276 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 334
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 335 IILERIE 341
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 79
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 80 VCRLLGICL-TSTVQL--------------------IMQLMPFGXLLDY-VREHKDNIGS 117
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 238 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 86 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 123
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 138/275 (50%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 39/280 (13%)
Query: 92 GTYGSVYRGTYDNQ----EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNV 147
G +GSV +G Y + +VA+K+L G + T +E + +LD+P +
Sbjct: 347 GNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADT--------EEMMREAQIMHQLDNPYI 398
Query: 148 TKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALK 207
+ +G + + + E GG L ++L+ +R+++ +
Sbjct: 399 VRLIGVCQAEALMLV---------------------MEMAGGGPLHKFLV-GKREEIPVS 436
Query: 208 IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE 267
V +L +S G+ YL K VHR++ N+LL ++ KI+DFG+++ + T
Sbjct: 437 NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496
Query: 268 TG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWE-IYCCDMPYPDLSFADVSSAVVRQN 323
+ L + APE + + ++ R DV+S+G+ +WE + PY + +V A + Q
Sbjct: 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQG 555
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
R E P CP L +M CW E RP+ V + + A
Sbjct: 556 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 86 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 123
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 137/274 (50%), Gaps = 28/274 (10%)
Query: 88 LIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNV 147
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+V
Sbjct: 47 VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPHV 104
Query: 148 TKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALK 207
+ +G + TS +++ + + +P G L Y +R + + +
Sbjct: 105 CRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGSQ 142
Query: 208 IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE 267
++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++ E
Sbjct: 143 YLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE 202
Query: 268 TGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNL 324
G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 203 GGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGER 262
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 263 LPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 72
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 73 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 110
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 111 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 230
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 231 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 79
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 80 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 117
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 118 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 178 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 237
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 238 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 84
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 85 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 122
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 123 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 183 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 242
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 243 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 82 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 82 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 81 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 86 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 123
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 81 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 82
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 83 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 120
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 241 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 137/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 81
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 82 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 120 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 267 ETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 180 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 239
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 240 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 72
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 73 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 111
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 112 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 171 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 231 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 62
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 63 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 101
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 102 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 66
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 67 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 105
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 106 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 164
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 225 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 138/279 (49%), Gaps = 36/279 (12%)
Query: 87 NLIAQGTYGSVYRGTY----DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
++ G +G+VY+G + + ++ V +++ E A + E V +
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELRE------ATSPKANKEILDEAYVMASV 108
Query: 143 DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRK 202
D+P+V + +G + TS +++ + + +P G L Y +R +
Sbjct: 109 DNPHVCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKD 146
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPR 262
+ + ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG+A++ +
Sbjct: 147 NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK 206
Query: 263 DMTGETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAV 319
+ E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS +
Sbjct: 207 EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL 266
Query: 320 VRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
+ P+ P C + IM KCW +A+ RP+ E++
Sbjct: 267 EKGERLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 72
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 73 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 111
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 112 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 170
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 231 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 270
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 62
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 63 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 101
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 102 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 161 LPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 127/307 (41%), Gaps = 52/307 (16%)
Query: 79 DLSKLDMRNL-----IAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
DL ++ +N+ + G +G VY G +VAVK L +E
Sbjct: 24 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP------EVCSEQD 77
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
L F E + K +H N+ + +G S+ + I E
Sbjct: 78 EL--DFLMEALIISKFNHQNIVRCIGVSLQSLPRFI--------------------LLEL 115
Query: 187 LPGGNLKQYLIRNRRK-----KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+ GG+LK +L R + LA+ ++ +A D++ G YL +HRD+ N LL
Sbjct: 116 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLT 175
Query: 242 SQ---RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGIC 296
R KI DFG+A+ A R + +M PE + + D +SFG+
Sbjct: 176 CPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
Query: 297 LWEIYCCD-MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ MPYP S +V V R + P+ CP + IM +CW E RP
Sbjct: 236 LWEIFSLGYMPYPSKSNQEVLEFVTSGG-RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFA 294
Query: 356 EVVKMLE 362
+++ +E
Sbjct: 295 IILERIE 301
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 62
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 63 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 101
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 102 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 160
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 161 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 260
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 136/301 (45%), Gaps = 54/301 (17%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
+ +G +G V YD ++VAVK L E G A+ ++E+ + + L
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIAD-------LKKEIEILRNL 68
Query: 143 DHPNVTKFVGASV--GTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
H N+ K+ G G + +K+ E+LP G+LK+YL +N+
Sbjct: 69 YHENIVKYKGICTEDGGNGIKL--------------------IMEFLPSGSLKEYLPKNK 108
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN 260
K + LK ++ A+ + +G+ YL S++ VHRD+ N+L++S+ +KI DFG+ + +
Sbjct: 109 NK-INLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD 167
Query: 261 PRDMT---GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YC----------CDM 305
T + + APE L + DV+SFG+ L E+ YC M
Sbjct: 168 KEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKM 227
Query: 306 PYPDLSFADVSSAV--VRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
P V+ V +++ R P CP + +MRKCW+ R +++ EA
Sbjct: 228 IGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 287
Query: 364 I 364
+
Sbjct: 288 L 288
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 39/280 (13%)
Query: 84 DMRNL--IAQGTYGSVYRGTYD-----NQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D+R L + G++G V RG +D VAVK L + + + E F +EV
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCL---KPDVLSQPEAM---DDFIREV 66
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
LDH N+ + G V T +K+ ++ A P G+L L
Sbjct: 67 NAMHSLDHRNLIRLYGV-VLTPPMKMVTELA--------------------PLGSLLDRL 105
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
R + L + + A+ ++ G+ YL SK+ +HRD+ N+LL ++ +KI DFG+ R
Sbjct: 106 -RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRA 164
Query: 257 EAQNPRDMTGETG---TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSF 312
QN + + APE L+ + ++ D + FG+ LWE++ P+ L+
Sbjct: 165 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
+ + + ++ R P CP + N+M +CW E RP
Sbjct: 225 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRP 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ G +G+V +G Y ++ + + A AL+ E V Q+LD+P +
Sbjct: 19 LGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
+ +G S + + E G L +YL +NR K K
Sbjct: 76 RMIGICEAESWMLV---------------------MEMAELGPLNKYLQQNRHVKD--KN 112
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMT 265
+I+L +S G+ YL VHRD+ N+LL +Q KI+DFG++ R + + T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNL 324
+ + APE + ++ + DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGE 231
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
R P CP + ++M CW + E RP V
Sbjct: 232 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 128/290 (44%), Gaps = 36/290 (12%)
Query: 89 IAQGTYGSVYRGTYDN---QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
I +G++G V++G DN Q VA+K++D E QQE+ V + D
Sbjct: 31 IGKGSFGEVFKGI-DNRTQQVVAIKIID--------LEEAEDEIEDIQQEITVLSQCDSS 81
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
VTK+ G+ + S L I EYL GG+ L +
Sbjct: 82 YVTKYYGSYLKGSKLWI--------------------IMEYLGGGSALDLLRAGPFDEFQ 121
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ +++ ++ +GL YLHS+K +HRD+K N+LL Q +K+ADFGVA
Sbjct: 122 IATMLK---EILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN 178
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV+Q Y+ + D++S GI E+ + P D+ V + + N
Sbjct: 179 TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-P 237
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
P + S + C + + RP E++K + SK + E
Sbjct: 238 PTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTSYLTE 287
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
N + +G +G VY+G +N VAVK L D TT E L+ F QE+ V K H N
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 91
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL-IRNRRKKLA 205
+ + +G S +L + Y+P G+L L + L+
Sbjct: 92 LVELLGFSSDGDDLCL--------------------VYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ ++A + G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 266 GE--TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
GT YMAPE L+G+ + D+YSFG+ L EI
Sbjct: 192 XSRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ G +G+V +G Y ++ + + A AL+ E V Q+LD+P +
Sbjct: 19 LGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 75
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
+ +G S + + E G L +YL +NR K K
Sbjct: 76 RMIGICEAESWMLV---------------------MEMAELGPLNKYLQQNRHVKD--KN 112
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMT 265
+I+L +S G+ YL VHRD+ N+LL +Q KI+DFG++ R + + T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 172
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNL 324
+ + APE + ++ + DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 173 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGE 231
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
R P CP + ++M CW + E RP V
Sbjct: 232 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 264
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 75
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 76 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 113
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + ++ G++YL +++VHRD+ N+L+ + + +KI DFG+A++ ++
Sbjct: 114 QYLLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 174 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 233
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 234 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ G +G+V +G Y ++ + + A AL+ E V Q+LD+P +
Sbjct: 13 LGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 69
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
+ +G S + + E G L +YL +NR K K
Sbjct: 70 RMIGICEAESWMLV---------------------MEMAELGPLNKYLQQNRHVKD--KN 106
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMT 265
+I+L +S G+ YL VHRD+ N+LL +Q KI+DFG++ R + + T
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 166
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNL 324
+ + APE + ++ + DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 167 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGE 225
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
R P CP + ++M CW + E RP V
Sbjct: 226 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 258
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
N + +G +G VY+G +N VAVK L D TT E L+ F QE+ V K H N
Sbjct: 31 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 85
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL-IRNRRKKLA 205
+ + +G S +L + Y+P G+L L + L+
Sbjct: 86 LVELLGFSSDGDDLCL--------------------VYVYMPNGSLLDRLSCLDGTPPLS 125
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ ++A + G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 126 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 266 GE--TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
GT YMAPE L+G+ + D+YSFG+ L EI
Sbjct: 186 XXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 221
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 107/217 (49%), Gaps = 29/217 (13%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
N + +G +G VY+G +N VAVK L D TT E L+ F QE+ V K H N
Sbjct: 37 NKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVMAKCQHEN 91
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL-IRNRRKKLA 205
+ + +G S +L + Y+P G+L L + L+
Sbjct: 92 LVELLGFSSDGDDLCL--------------------VYVYMPNGSLLDRLSCLDGTPPLS 131
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ ++A + G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 266 GE--TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
GT YMAPE L+G+ + D+YSFG+ L EI
Sbjct: 192 XXRIVGTTAYMAPEALRGE-ITPKSDIYSFGVVLLEI 227
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ G +G+V +G Y ++ + + A AL+ E V Q+LD+P +
Sbjct: 15 LGSGNFGTVKKGYY---QMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIV 71
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
+ +G S + + E G L +YL +NR K K
Sbjct: 72 RMIGICEAESWMLV---------------------MEMAELGPLNKYLQQNRHVKD--KN 108
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMT 265
+I+L +S G+ YL VHRD+ N+LL +Q KI+DFG++ R + + T
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 168
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNL 324
+ + APE + ++ + DV+SFG+ +WE + PY + ++V +A++ +
Sbjct: 169 HGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV-TAMLEKGE 227
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
R P CP + ++M CW + E RP V
Sbjct: 228 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 260
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 79 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 116
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 117 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 176
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 177 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 236
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 237 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 136/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 85
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + + +P G L Y +R + +
Sbjct: 86 VCRLLGICL-TSTVQLIT--------------------QLMPFGCLLDY-VREHKDNIGS 123
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 124 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 183
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 184 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 243
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 244 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 56/300 (18%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
+ +G +G V YD + VAVK L G LRS +Q+E+ + + L
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCG--------PQLRSGWQREIEILRTL 68
Query: 143 DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRK 202
H ++ K+ G + EY+P G+L+ YL R+
Sbjct: 69 YHEHIVKYKGCCEDQGEKSV------------------QLVMEYVPLGSLRDYLPRH--- 107
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV-----E 257
+ L ++ A + G++YLH++ +HR + N+LLD+ R +KI DFG+A+ E
Sbjct: 108 CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 167
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSFADV 315
R+ G++ Y APE L+ + DV+SFG+ L+E+ YC P F ++
Sbjct: 168 YYRVRE-DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL 225
Query: 316 S------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
+ ++ + R P CP + ++M+ CW+ A RP +V +L+
Sbjct: 226 IGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 285
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 47/324 (14%)
Query: 67 NESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-----VAVKLLDWGEDGMAT 121
+E + E+ I + + ++ +G +GSV ++ VAVK+L D +A+
Sbjct: 9 DELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLK--ADIIAS 66
Query: 122 TAETAALRSSFQQEVAVWQKLDHPNVTKFVGASV---GTSNLKIPSKTASVDGNXXXXXX 178
+ LR E A ++ DHP+V K VG S+ L IP
Sbjct: 67 SDIEEFLR-----EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP--------------- 106
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKK----LALKIVIQLALDLSRGLSYLHSKKIVHRDVK 234
++ G+L +L+ +R + L L+ +++ +D++ G+ YL S+ +HRD+
Sbjct: 107 --MVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLA 164
Query: 235 TENMLLDSQRTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYS 292
N +L T+ +ADFG++R R + ++A E L Y DV++
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWA 224
Query: 293 FGICLWEIYC-CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
FG+ +WEI PY + A++ + ++ N R + P C + ++M +CW A+ ++R
Sbjct: 225 FGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQR 283
Query: 352 P-------EMGEVVKMLEAIDTSK 368
P E+ ++ L + TS+
Sbjct: 284 PSFTCLRMELENILGHLSVLSTSQ 307
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 135/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 80
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 81 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 119 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 178
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 179 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 238
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 239 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 56/300 (18%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
+ +G +G V YD + VAVK L G LRS +Q+E+ + + L
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCG--------PQLRSGWQREIEILRTL 67
Query: 143 DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRK 202
H ++ K+ G + EY+P G+L+ YL R+
Sbjct: 68 YHEHIVKYKGCCEDQGEKSV------------------QLVMEYVPLGSLRDYLPRH--- 106
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV-----E 257
+ L ++ A + G++YLH++ +HR + N+LLD+ R +KI DFG+A+ E
Sbjct: 107 CVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHE 166
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSFADV 315
R+ G++ Y APE L+ + DV+SFG+ L+E+ YC P F ++
Sbjct: 167 YYRVRE-DGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTEL 224
Query: 316 S------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEA 363
+ ++ + R P CP + ++M+ CW+ A RP +V +L+
Sbjct: 225 IGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPILQT 284
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 50/316 (15%)
Query: 68 ESQR-PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTY-DNQEVAVKLLDWGEDGMATTAET 125
ES R P + E + D + LI G +G VY+G D +VA+K T E+
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPES 75
Query: 126 AALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
+ F+ E+ HP++ +G + + + K
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK-------------------- 115
Query: 186 YLPGGNLKQYLIRNRRKKLAL--KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
Y+ GNLK++L + +++ + +++ + +RGL YLH++ I+HRDVK+ N+LLD
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN 175
Query: 244 RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
KI DFG+++ E GTLGY+ PE + DVYSFG+ L+E+
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 302 CC------DMPYPDLSFADVS---------SAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
C +P ++ A+ + +V NL +I + KC
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL 295
Query: 347 NAEKRPEMGEVVKMLE 362
++E RP MG+V+ LE
Sbjct: 296 SSEDRPSMGDVLWKLE 311
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 21/302 (6%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-------VAVKLLDWGEDGMATTAETAA 127
+WE L + + +G +G V + T + + VAVK+L A+ +E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----ASPSELRD 72
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S F V ++++HP+V K GA L + + A YL
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 188 PGGNLKQYLIRNRRKKLALKI--VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
G + + + AL + +I A +S+G+ YL K+VHRD+ N+L+ R
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 246 LKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI+DFG++R + + G + +MA E L Y + DV+SFG+ LWEI
Sbjct: 189 MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 304 -DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
PYP + + + +++ R E P C + +M +CW +KRP ++ K LE
Sbjct: 249 GGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 363 AI 364
+
Sbjct: 308 KM 309
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 135/275 (49%), Gaps = 28/275 (10%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
++ G +G+VY+G + + VK+ ++ T+ A E V +D+P+
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA--NKEILDEAYVMASVDNPH 82
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
V + +G + TS +++ + +P G L Y +R + +
Sbjct: 83 VCRLLGICL-TSTVQL--------------------IMQLMPFGCLLDY-VREHKDNIGS 120
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ ++ + +++G++YL +++VHRD+ N+L+ + + +KI DFG A++ ++
Sbjct: 121 QYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHA 180
Query: 267 ETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQN 323
E G + +MA E + + Y + DV+S+G+ +WE+ PY + +++SS + +
Sbjct: 181 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGE 240
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P+ P C + IM KCW +A+ RP+ E++
Sbjct: 241 RLPQ-PPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE--VAVKLLDWGEDGMATTAETAALRS 130
K +W L ++ + +G +G+VY N + +A+K+L E A +
Sbjct: 2 KRQWA--LEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G ++ + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDSTRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSKK++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ D + R P +++ + N +RP + EV++
Sbjct: 210 TYQDTYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTY-------DNQEVAVKLLDWGEDGMATTAETAALR 129
EI LS + + + +G VY+G Q VA+K L +G LR
Sbjct: 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------PLR 73
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
F+ E + +L HPNV +G L + Y
Sbjct: 74 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM--------------------IFSYCSH 113
Query: 190 GNLKQYLI--------------RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKT 235
G+L ++L+ R + L + L ++ G+ YL S +VH+D+ T
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 236 ENMLLDSQRTLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSF 293
N+L+ + +KI+D G+ R V A + + G + + +MAPE + ++ D++S+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 294 GICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
G+ LWE++ + PY S DV + + + P P CP+ + +M +CW+ +RP
Sbjct: 234 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRP 292
Query: 353 EMGEVVKMLEA 363
++ L A
Sbjct: 293 RFKDIHSRLRA 303
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 140/316 (44%), Gaps = 50/316 (15%)
Query: 68 ESQR-PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTY-DNQEVAVKLLDWGEDGMATTAET 125
ES R P + E + D + LI G +G VY+G D +VA+K T E+
Sbjct: 25 ESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALK---------RRTPES 75
Query: 126 AALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
+ F+ E+ HP++ +G + + + K
Sbjct: 76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK-------------------- 115
Query: 186 YLPGGNLKQYLIRNRRKKLAL--KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
Y+ GNLK++L + +++ + +++ + +RGL YLH++ I+HRDVK+ N+LLD
Sbjct: 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDEN 175
Query: 244 RTLKIADFGVAR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
KI DFG+++ E GTLGY+ PE + DVYSFG+ L+E+
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 302 CC------DMPYPDLSFADVS---------SAVVRQNLRPEIPRCCPSSLANIMRKCWDA 346
C +P ++ A+ + +V NL +I + KC
Sbjct: 236 CARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLAL 295
Query: 347 NAEKRPEMGEVVKMLE 362
++E RP MG+V+ LE
Sbjct: 296 SSEDRPSMGDVLWKLE 311
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 129/282 (45%), Gaps = 37/282 (13%)
Query: 80 LSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+KLD I +G++G VY+G + + VA+K++D E QQE+
Sbjct: 21 FTKLDR---IGKGSFGEVYKGIDNHTKEVVAIKIID--------LEEAEDEIEDIQQEIT 69
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
V + D P +T++ G+ + ++ L I EYL GG+ L
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWI--------------------IMEYLGGGSALDLLK 109
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
++ + +++ ++ +GL YLHS++ +HRD+K N+LL Q +K+ADFGVA
Sbjct: 110 PGPLEETYIATILR---EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 166
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
GT +MAPEV++ Y+ + D++S GI E+ + P DL V
Sbjct: 167 TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV-L 225
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ +N P + + C + + RP E++K
Sbjct: 226 FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 21/302 (6%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-------VAVKLLDWGEDGMATTAETAA 127
+WE L + + +G +G V + T + + VAVK+L A+ +E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----ASPSELRD 72
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S F V ++++HP+V K GA L + + A YL
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYL 128
Query: 188 PGGNLKQYLIRNRRKKLALKI--VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
G + + + AL + +I A +S+G+ YL K+VHRD+ N+L+ R
Sbjct: 129 GSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK 188
Query: 246 LKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI+DFG++R + + G + +MA E L Y + DV+SFG+ LWEI
Sbjct: 189 MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTL 248
Query: 304 -DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
PYP + + + +++ R E P C + +M +CW +KRP ++ K LE
Sbjct: 249 GGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLE 307
Query: 363 AI 364
+
Sbjct: 308 KM 309
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W L D+ + +G +G+VY R +A+K+L T E A +
Sbjct: 6 KRQW--TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEH 57
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 97
Query: 191 NLK---QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLK 247
+ Q L R ++ A I +L+ LSY HSK+++HRD+K EN+LL S LK
Sbjct: 98 TVYRELQKLSRFDEQRTATYIT-----ELANALSYCHSKRVIHRDIKPENLLLGSNGELK 152
Query: 248 IADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
IADFG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 153 IADFGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + NA +R + EV++
Sbjct: 211 EAHTYQETYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 138/295 (46%), Gaps = 41/295 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLL---DWGEDGMATTAETAALRSSFQQ 134
ID +L+ + + G +++G + ++ VK+L DW +T ++ F +
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDW------STRKS----RDFNE 56
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E + HPNV +GA P+ ++ ++P G+L
Sbjct: 57 ECPRLRIFSHPNVLPVLGACQSP-----PAPHPTL-------------ITHWMPYGSLYN 98
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDSQRTLKIADFG 252
L + ++ ALD++RG+++LH+ + I + + ++++D T +I+
Sbjct: 99 VLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMAD 158
Query: 253 VARVEAQNPRDMTGETGTLGYMAPEVLQGKP--YNRR-CDVYSFGICLWEIYCCDMPYPD 309
V + Q+P G ++APE LQ KP NRR D++SF + LWE+ ++P+ D
Sbjct: 159 V-KFSFQSP----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFAD 213
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
LS ++ V + LRP IP ++ +M+ C + + KRP+ +V +LE +
Sbjct: 214 LSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 64/305 (20%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLL--DWGEDGMATTAETAALRSSFQQEVAVWQ 140
+ +G +G V YD + VAVK L D G RS ++QE+ + +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 141 KLDHPNVTKFVGAS--VGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L H ++ K+ G G +L++ EY+P G+L+ YL R
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQL--------------------VMEYVPLGSLRDYLPR 111
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV-- 256
+ + L ++ A + G++YLHS+ +HR++ N+LLD+ R +KI DFG+A+
Sbjct: 112 H---SIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 257 ---EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLS 311
E R+ G++ Y APE L+ + DV+SFG+ L+E+ +C P
Sbjct: 169 EGHEYYRVRE-DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 226
Query: 312 FADVS------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
F ++ + ++ + R P CP + ++M+ CW+ A RP ++
Sbjct: 227 FLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIP 286
Query: 360 MLEAI 364
+L+ +
Sbjct: 287 ILKTV 291
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 132/311 (42%), Gaps = 53/311 (17%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTY-------DNQEVAVKLLDWGEDGMATTAETAALR 129
EI LS + + + +G VY+G Q VA+K L +G LR
Sbjct: 5 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEG--------PLR 56
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
F+ E + +L HPNV +G L + Y
Sbjct: 57 EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM--------------------IFSYCSH 96
Query: 190 GNLKQYLI--------------RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKT 235
G+L ++L+ R + L + L ++ G+ YL S +VH+D+ T
Sbjct: 97 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 236 ENMLLDSQRTLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSF 293
N+L+ + +KI+D G+ R V A + + G + + +MAPE + ++ D++S+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 294 GICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRP 352
G+ LWE++ + PY S DV + + + P P CP+ + +M +CW+ +RP
Sbjct: 217 GVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLP-CPDDCPAWVYALMIECWNEFPSRRP 275
Query: 353 EMGEVVKMLEA 363
++ L A
Sbjct: 276 RFKDIHSRLRA 286
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 42/292 (14%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W L D+ + +G +G+VY R +A+K+L T E A +
Sbjct: 6 KRQW--TLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVL------FKTQLEKAGVEH 57
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 97
Query: 191 NLK---QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLK 247
+ Q L R ++ A I +L+ LSY HSK+++HRD+K EN+LL S LK
Sbjct: 98 TVYRELQKLSRFDEQRTATYIT-----ELANALSYCHSKRVIHRDIKPENLLLGSNGELK 152
Query: 248 IADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
IADFG + + RD GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 153 IADFGWSVHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + NA +R + EV++
Sbjct: 211 EAHTYQETYRRISRVEF--TFPDFVTEGARDLISRLLKHNASQRLTLAEVLE 260
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQ 134
E++ + + R ++ +GTYG VY G + +V + + + E + +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE-------RDSRYSQPLHE 68
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+A+ + L H N+ +++G+ +KI E +PGG+L
Sbjct: 69 EIALHKHLKHKNIVQYLGSFSENGFIKI--------------------FMEQVPGGSLSA 108
Query: 195 YLIRNRRKKLA--LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TLKIADF 251
L+R++ L + + + GL YLH +IVHRD+K +N+L+++ LKI+DF
Sbjct: 109 -LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDF 167
Query: 252 GVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP--YNRRCDVYSFGICLWEIYCCDMPYP 308
G + R+ NP T TGTL YMAPE++ P Y + D++S G + E+ P+
Sbjct: 168 GTSKRLAGINPCTETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
Query: 309 DLSFADVSSAVVRQ-NLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+L + V + PEIP + + KC++ + +KR
Sbjct: 227 ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+D + + +++I +G +G V + + +D M A R F E+
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRD-FAGELE 77
Query: 138 VWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HPN+ +GA L + EY P GNL +L
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHGNLLDFL 117
Query: 197 IRNR--------------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
++R L+ + ++ A D++RG+ YL K+ +HRD+ N+L+
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 177
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
KIADFG++R + + G + +MA E L Y DV+S+G+ LWEI
Sbjct: 178 NYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
Query: 303 C-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV--- 358
PY ++ A++ + Q R E P C + ++MR+CW +RP +++
Sbjct: 237 LGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 295
Query: 359 -KMLE 362
+MLE
Sbjct: 296 NRMLE 300
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+D + + +++I +G +G V + + +D M A R F E+
Sbjct: 12 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRD-FAGELE 67
Query: 138 VWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HPN+ +GA L + EY P GNL +L
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHGNLLDFL 107
Query: 197 IRNR--------------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
++R L+ + ++ A D++RG+ YL K+ +HRD+ N+L+
Sbjct: 108 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 167
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
KIADFG++R + + G + +MA E L Y DV+S+G+ LWEI
Sbjct: 168 NYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
Query: 303 C-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV--- 358
PY ++ A++ + Q R E P C + ++MR+CW +RP +++
Sbjct: 227 LGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 285
Query: 359 -KMLE 362
+MLE
Sbjct: 286 NRMLE 290
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 134/284 (47%), Gaps = 36/284 (12%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQ 134
E++ + + R ++ +GTYG VY G + +V + + + E + +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPE-------RDSRYSQPLHE 54
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+A+ + L H N+ +++G+ +KI E +PGG+L
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKI--------------------FMEQVPGGSLSA 94
Query: 195 YLIRNRRKKLA--LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TLKIADF 251
L+R++ L + + + GL YLH +IVHRD+K +N+L+++ LKI+DF
Sbjct: 95 -LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDF 153
Query: 252 GVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP--YNRRCDVYSFGICLWEIYCCDMPYP 308
G + R+ NP T TGTL YMAPE++ P Y + D++S G + E+ P+
Sbjct: 154 GTSKRLAGINPCTETF-TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 212
Query: 309 DLSFADVSSAVVRQ-NLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+L + V + PEIP + + KC++ + +KR
Sbjct: 213 ELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 89 IAQGTYGSVYRGTYDNQE---VAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
I +G++G V++G DN+ VA+K++D E QQE+ V + D P
Sbjct: 35 IGKGSFGEVFKGI-DNRTQKVVAIKIIDL--------EEAEDEIEDIQQEITVLSQCDSP 85
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
VTK+ G+ + + L I EYL GG+ L +
Sbjct: 86 YVTKYYGSYLKDTKLWI--------------------IMEYLGGGSALDLLEPGPLDETQ 125
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ +++ ++ +GL YLHS+K +HRD+K N+LL +K+ADFGVA
Sbjct: 126 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 182
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV++ Y+ + D++S GI E+ + P+ +L V + + N
Sbjct: 183 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 241
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + L + C + RP E++K
Sbjct: 242 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 275
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAVK++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRMK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDA 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + +++K
Sbjct: 232 --IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 88 LIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
LI G +G V++ + D + ++ + + + ++EV KLDH
Sbjct: 19 LIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA-------------EREVKALAKLDHV 65
Query: 146 NVTKFVGASVG------TSNLKIPSKTASVDGNXXXXXXXXX---XXXEYLPGGNLKQYL 196
N+ + G G TS+ + S + + E+ G L+Q++
Sbjct: 66 NIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
+ R +KL + ++L +++G+ Y+HSKK++HRD+K N+ L + +KI DFG+
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLV-T 184
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE-IYCCDMPYPDLS-FAD 314
+N T GTL YM+PE + + Y + D+Y+ G+ L E ++ CD + F D
Sbjct: 185 SLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTD 244
Query: 315 VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
+ + I +++K E RP E+++ L
Sbjct: 245 LRDGI--------ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 283
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 89 IAQGTYGSVYRGTYDNQE---VAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
I +G++G V++G DN+ VA+K++D E QQE+ V + D P
Sbjct: 30 IGKGSFGEVFKGI-DNRTQKVVAIKIID--------LEEAEDEIEDIQQEITVLSQCDSP 80
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
VTK+ G+ + + L I EYL GG+ L +
Sbjct: 81 YVTKYYGSYLKDTKLWI--------------------IMEYLGGGSALDLLEPGPLDETQ 120
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ +++ ++ +GL YLHS+K +HRD+K N+LL +K+ADFGVA
Sbjct: 121 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 177
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV++ Y+ + D++S GI E+ + P+ +L V + + N
Sbjct: 178 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 236
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + L + C + RP E++K
Sbjct: 237 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 270
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 89 IAQGTYGSVYRGTYDNQE---VAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
I +G++G V++G DN+ VA+K++D E QQE+ V + D P
Sbjct: 15 IGKGSFGEVFKGI-DNRTQKVVAIKIID--------LEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
VTK+ G+ + + L I EYL GG+ L +
Sbjct: 66 YVTKYYGSYLKDTKLWI--------------------IMEYLGGGSALDLLEPGPLDETQ 105
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ +++ ++ +GL YLHS+K +HRD+K N+LL +K+ADFGVA
Sbjct: 106 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV++ Y+ + D++S GI E+ + P+ +L V + + N
Sbjct: 163 XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 221
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + L + C + RP E++K
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAVK++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRMK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDT 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + +++K
Sbjct: 232 --IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAVK++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRMK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDT 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + +++K
Sbjct: 232 --IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 36/274 (13%)
Query: 89 IAQGTYGSVYRGTYDNQE---VAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
I +G++G V++G DN+ VA+K++D E QQE+ V + D P
Sbjct: 15 IGKGSFGEVFKGI-DNRTQKVVAIKIID--------LEEAEDEIEDIQQEITVLSQCDSP 65
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
VTK+ G+ + + L I EYL GG+ L +
Sbjct: 66 YVTKYYGSYLKDTKLWI--------------------IMEYLGGGSALDLLEPGPLDETQ 105
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
+ +++ ++ +GL YLHS+K +HRD+K N+LL +K+ADFGVA
Sbjct: 106 IATILR---EILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN 162
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV++ Y+ + D++S GI E+ + P+ +L V + + N
Sbjct: 163 TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-P 221
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + L + C + RP E++K
Sbjct: 222 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 255
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 64/305 (20%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLL--DWGEDGMATTAETAALRSSFQQEVAVWQ 140
+ +G +G V YD + VAVK L D G RS ++QE+ + +
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQH----------RSGWKQEIDILR 71
Query: 141 KLDHPNVTKFVGAS--VGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
L H ++ K+ G G +L++ EY+P G+L+ YL R
Sbjct: 72 TLYHEHIIKYKGCCEDQGEKSLQL--------------------VMEYVPLGSLRDYLPR 111
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV-- 256
+ + L ++ A + G++YLH++ +HR++ N+LLD+ R +KI DFG+A+
Sbjct: 112 H---SIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVP 168
Query: 257 ---EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLS 311
E R+ G++ Y APE L+ + DV+SFG+ L+E+ +C P
Sbjct: 169 EGHEYYRVRE-DGDSPVFWY-APECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK 226
Query: 312 FADVS------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
F ++ + ++ + R P CP + ++M+ CW+ A RP ++
Sbjct: 227 FLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIP 286
Query: 360 MLEAI 364
+L+ +
Sbjct: 287 ILKTV 291
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 139/322 (43%), Gaps = 61/322 (18%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE-------VAVKLLDWGEDGMATTAETAA 127
+WE L + + +G +G V + T + + VAVK+L A+ +E
Sbjct: 17 KWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN----ASPSELRD 72
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S F V ++++HP+V K GA S DG EY
Sbjct: 73 LLSEFN----VLKQVNHPHVIKLYGA-------------CSQDG-------PLLLIVEYA 108
Query: 188 PGGNLKQYLIRNRR----------------------KKLALKIVIQLALDLSRGLSYLHS 225
G+L+ +L +R+ + L + +I A +S+G+ YL
Sbjct: 109 KYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE 168
Query: 226 KKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKP 283
+VHRD+ N+L+ R +KI+DFG++R + + G + +MA E L
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHI 228
Query: 284 YNRRCDVYSFGICLWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRK 342
Y + DV+SFG+ LWEI PYP + + + +++ R E P C + +M +
Sbjct: 229 YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLKTGHRMERPDNCSEEMYRLMLQ 287
Query: 343 CWDANAEKRPEMGEVVKMLEAI 364
CW +KRP ++ K LE +
Sbjct: 288 CWKQEPDKRPVFADISKDLEKM 309
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 141/329 (42%), Gaps = 72/329 (21%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK- 141
L + + A+G +G V++ N VAVK+ + + S+Q E ++
Sbjct: 17 LQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQD------------KQSWQSEREIFSTP 64
Query: 142 -LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
+ H N+ +F+ A SNL++ + + G+L YL N
Sbjct: 65 GMKHENLLQFIAAEKRGSNLEVELWLITA----------------FHDKGSLTDYLKGN- 107
Query: 201 RKKLALKIVIQLALDLSRGLSYLHS-----------KKIVHRDVKTENMLLDSQRTLKIA 249
+ + +A +SRGLSYLH I HRD K++N+LL S T +A
Sbjct: 108 --IITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLA 165
Query: 250 DFGVA-RVE-AQNPRDMTGETGTLGYMAPEVLQGK-PYNR----RCDVYSFGICLWEIY- 301
DFG+A R E + P D G+ GT YMAPEVL+G + R R D+Y+ G+ LWE+
Sbjct: 166 DFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
Query: 302 ---CCDMPYPDL------------SFADVSSAVVRQNLRPEI-----PRCCPSSLANIMR 341
D P + S ++ VV + +RP I + L +
Sbjct: 226 RCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIE 285
Query: 342 KCWDANAEKRPEMGEVVKMLEAIDTSKGG 370
+CWD +AE R G V + + I S G
Sbjct: 286 ECWDHDAEARLSAGCVEERVSLIRRSVNG 314
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 19/306 (6%)
Query: 69 SQRP-KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMA 120
+Q P E+WE + L + G +G V T +VAVK+L A
Sbjct: 18 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STA 73
Query: 121 TTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASV-GTSNLKIPSKTASVDGNXXXXXXX 179
E AL S + + Q H N+ +GA G L I D
Sbjct: 74 HADEKEALMSELKIMSHLGQ---HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKA 130
Query: 180 XXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML 239
L G + L + + L L+ ++ + +++G+++L SK +HRDV N+L
Sbjct: 131 EAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVL 190
Query: 240 LDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCDVYSFGICL 297
L + KI DFG+AR + + L +MAPE + Y + DV+S+GI L
Sbjct: 191 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL 250
Query: 298 WEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
WEI+ + PYP + +V+ + P P ++ +IM+ CW RP +
Sbjct: 251 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQ 310
Query: 357 VVKMLE 362
+ L+
Sbjct: 311 ICSFLQ 316
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAVK++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIXKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VXEYASGGEVFDYLVAHGRXK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN-EFTFGNKLDA 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + ++ K
Sbjct: 232 --IPFYXSTDCENLLKKFLILNPSKRGTLEQIXK 263
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 126/276 (45%), Gaps = 39/276 (14%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAVK++D T +++L+ F+ EV + + L+HPN
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 67
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN--RRKKL 204
+ K L + EY GG + YL+ + ++K
Sbjct: 68 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGWMKEKE 107
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
A Q+ + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 108 ARAKFRQIV----SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKL 162
Query: 265 TGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQN 323
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R
Sbjct: 163 DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK 222
Query: 324 LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
R IP + N+++K N KR + +++K
Sbjct: 223 YR--IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 256
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAV+++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRMK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDT 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + +++K
Sbjct: 232 --IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 132/305 (43%), Gaps = 46/305 (15%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
+D + + +++I +G +G V + + +D M A R F E+
Sbjct: 19 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLR---MDAAIKRMKEYASKDDHRD-FAGELE 74
Query: 138 VWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
V KL HPN+ +GA L + EY P GNL +L
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYL--------------------AIEYAPHGNLLDFL 114
Query: 197 IRNR--------------RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
++R L+ + ++ A D++RG+ YL K+ +HR++ N+L+
Sbjct: 115 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGE 174
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
KIADFG++R + + G + +MA E L Y DV+S+G+ LWEI
Sbjct: 175 NYVAKIADFGLSRGQEVYVKKTMGRL-PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
Query: 303 C-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV--- 358
PY ++ A++ + Q R E P C + ++MR+CW +RP +++
Sbjct: 234 LGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSL 292
Query: 359 -KMLE 362
+MLE
Sbjct: 293 NRMLE 297
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 124/274 (45%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVAV+++D T +++L+ F+ EV + + L+HPN
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIID------KTQLNSSSLQKLFR-EVRIMKVLNHPN 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 75 IVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRMK--E 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 113 KEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN-EFTFGNKLDE 171
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N+++K N KR + +++K
Sbjct: 232 --IPFYMSTDCENLLKKFLILNPSKRGTLEQIMK 263
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 48/314 (15%)
Query: 69 SQRP-KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMA 120
+Q P E+WE + L + G +G V T +VAVK+L A
Sbjct: 25 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STA 80
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXX 179
E AL S E+ + L H N+ +GA + + +
Sbjct: 81 HADEKEALMS----ELKIMSHLGQHENIVNLLGACTHGGPVLVIT--------------- 121
Query: 180 XXXXXEYLPGGNLKQYLIRNRR--------KKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EY G+L +L R + L L+ ++ + +++G+++L SK +HR
Sbjct: 122 -----EYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 176
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCD 289
DV N+LL + KI DFG+AR + + L +MAPE + Y + D
Sbjct: 177 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 236
Query: 290 VYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+S+GI LWEI+ + PYP + +V+ + P P ++ +IM+ CW
Sbjct: 237 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 296
Query: 349 EKRPEMGEVVKMLE 362
RP ++ L+
Sbjct: 297 THRPTFQQICSFLQ 310
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 131/314 (41%), Gaps = 48/314 (15%)
Query: 69 SQRP-KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMA 120
+Q P E+WE + L + G +G V T +VAVK+L A
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STA 88
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXX 179
E AL S E+ + L H N+ +GA + + +
Sbjct: 89 HADEKEALMS----ELKIMSHLGQHENIVNLLGACTHGGPVLVIT--------------- 129
Query: 180 XXXXXEYLPGGNLKQYLIRNRR--------KKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
EY G+L +L R + L L+ ++ + +++G+++L SK +HR
Sbjct: 130 -----EYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHR 184
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCD 289
DV N+LL + KI DFG+AR + + L +MAPE + Y + D
Sbjct: 185 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 244
Query: 290 VYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+S+GI LWEI+ + PYP + +V+ + P P ++ +IM+ CW
Sbjct: 245 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 304
Query: 349 EKRPEMGEVVKMLE 362
RP ++ L+
Sbjct: 305 THRPTFQQICSFLQ 318
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 123/289 (42%), Gaps = 41/289 (14%)
Query: 70 QRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD--NQEVAVKLLD-----WGEDGMATT 122
+RP + ++ + ++ ++ +G++G V+ + NQ A+K L +D T
Sbjct: 7 ERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 66
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
E L + W+ HP +T NL
Sbjct: 67 VEKRVLSLA-------WE---HPFLTHMFCTFQTKENLFF-------------------- 96
Query: 183 XXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
EYL GG+L ++ K L A ++ GL +LHSK IV+RD+K +N+LLD
Sbjct: 97 VMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK 154
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
+KIADFG+ + GT Y+APE+L G+ YN D +SFG+ L+E+
Sbjct: 155 DGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 214
Query: 303 CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ ++ ++ N P PR +++ K + EKR
Sbjct: 215 GQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 261
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 7 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPRG 98
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 99 EVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 157 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 37/287 (12%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQ-- 134
E +L KL ++ G +G+V++G + + ++K+ E + R SFQ
Sbjct: 30 ETELRKL---KVLGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVT 81
Query: 135 -EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+ LDH ++ + +G G+S +YLP G+L
Sbjct: 82 DHMLAIGSLDHAHIVRLLGLCPGSS---------------------LQLVTQYLPLGSLL 120
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+ +R R L ++++ + +++G+ YL +VHR++ N+LL S +++ADFGV
Sbjct: 121 DH-VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV 179
Query: 254 ARVEAQNPRDMT-GETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDL 310
A + + + + E T + +MA E + Y + DV+S+G+ +WE+ PY L
Sbjct: 180 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 239
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
A+V ++ + R P+ C + +M KCW + RP E+
Sbjct: 240 RLAEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 37/287 (12%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQ-- 134
E +L KL ++ G +G+V++G + + ++K+ E + R SFQ
Sbjct: 12 ETELRKL---KVLGSGVFGTVHKGVWIPEGESIKI-----PVCIKVIEDKSGRQSFQAVT 63
Query: 135 -EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+ LDH ++ + +G G+S +YLP G+L
Sbjct: 64 DHMLAIGSLDHAHIVRLLGLCPGSS---------------------LQLVTQYLPLGSLL 102
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+ +R R L ++++ + +++G+ YL +VHR++ N+LL S +++ADFGV
Sbjct: 103 DH-VRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGV 161
Query: 254 ARVEAQNPRDMT-GETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDL 310
A + + + + E T + +MA E + Y + DV+S+G+ +WE+ PY L
Sbjct: 162 ADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL 221
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
A+V ++ + R P+ C + +M KCW + RP E+
Sbjct: 222 RLAEVPD-LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 37/296 (12%)
Query: 66 RNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTA 123
+NE + K +W ++ ++ + +G +G+VY R +A+K+L
Sbjct: 13 KNEESK-KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQL 63
Query: 124 ETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXX 183
E A + ++EV + L HPN+ + G + + +
Sbjct: 64 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------I 103
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
EY P G + + L + K + +L+ LSY HSK+++HRD+K EN+LL S
Sbjct: 104 LEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 161
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
LKIADFG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E
Sbjct: 162 GELKIADFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P+ ++ + + R P +++ + N +RP + EV++
Sbjct: 220 KPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 134/296 (45%), Gaps = 37/296 (12%)
Query: 66 RNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTA 123
+NE + K +W ++ ++ + +G +G+VY R +A+K+L
Sbjct: 22 KNEESK-KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQL 72
Query: 124 ETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXX 183
E A + ++EV + L HPN+ + G + + +
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------I 112
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
EY P G + + L + K + +L+ LSY HSK+++HRD+K EN+LL S
Sbjct: 113 LEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 170
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
LKIADFG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E
Sbjct: 171 GELKIADFGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P+ ++ + + R P +++ + N +RP + EV++
Sbjct: 229 KPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 7 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 98
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 99 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE ++G+ ++ + D++S G+ +E P+
Sbjct: 157 FGWS-VHAPSSRRTTL-CGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPXLREVLE 261
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 6 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 57
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 58 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 97
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 98 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 155
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 156 FGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 213
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 214 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 260
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 7 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 98
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 99 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 157 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 135/300 (45%), Gaps = 53/300 (17%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDW-GEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +GSV YD VAVK L G D + FQ+E+ + +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ----------QRDFQREIQILKA 64
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L + K+ G S G ++ EYLP G L+ +L R+R
Sbjct: 65 LHSDFIVKYRGVSYGPGRPEL------------------RLVMEYLPSGCLRDFLQRHRA 106
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR-VEAQN 260
+ A ++++ + + +G+ YL S++ VHRD+ N+L++S+ +KIADFG+A+ +
Sbjct: 107 RLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 165
Query: 261 PRDMTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSFADVS 316
+ E G + + APE L ++R+ DV+SFG+ L+E+ YC P F +
Sbjct: 166 DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMM 225
Query: 317 S------AVVRQNL------RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
A+ R R P CP+ + +M+ CW + + RP + L+ +
Sbjct: 226 GCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 5 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 96
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 155 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 5 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 96
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 155 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 7 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 98
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 99 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 157 FGWS-VHAPSSRR-TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 32/279 (11%)
Query: 88 LIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
LI G +G V++ + D + +K + + + ++EV KLDH
Sbjct: 18 LIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA-------------EREVKALAKLDHV 64
Query: 146 NVTKFVGASVGTS-NLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
N+ + G G + + SK +S E+ G L+Q++ + R +KL
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSS-----RSKTKCLFIQMEFCDKGTLEQWIEKRRGEKL 119
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+ ++L +++G+ Y+HSKK+++RD+K N+ L + +KI DFG+ +N
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV-TSLKNDGKR 178
Query: 265 TGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE-IYCCDMPYPDLS-FADVSSAVVRQ 322
GTL YM+PE + + Y + D+Y+ G+ L E ++ CD + F D+ +
Sbjct: 179 XRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGI--- 235
Query: 323 NLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
I +++K E RP E+++ L
Sbjct: 236 -----ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 1 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 52
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 53 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 92
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 93 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 150
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 151 FGWS-VHAPSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 208
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 209 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 255
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSRR-TXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 210 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 3 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 54
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 94
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 95 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 153 FGWS-VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 211 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 128/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 3 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 54
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 94
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 95 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + + RD GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 153 FGWSVHAPSSRRDTL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 211 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVA+K++D T +L+ F+ EV + + L+HPN
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIID------KTQLNPTSLQKLFR-EVRIMKILNHPN 72
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 73 IVKLFEVIETEKTLYL--------------------IMEYASGGEVFDYLVAHGRMK--E 110
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K+IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 111 KEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKLDT 169
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 170 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 229
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N++++ N KR + +++K
Sbjct: 230 --IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 261
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 136/302 (45%), Gaps = 57/302 (18%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDW-GEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +GSV YD VAVK L G D + FQ+E+ + +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ----------QRDFQREIQILKA 68
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L + K+ G S G + EYLP G L+ +L R+R
Sbjct: 69 LHSDFIVKYRGVSYGPGRQSL------------------RLVMEYLPSGCLRDFLQRHRA 110
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+ A ++++ + + +G+ YL S++ VHRD+ N+L++S+ +KIADFG+A++ +
Sbjct: 111 RLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD- 168
Query: 262 RDM-----TGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSFAD 314
+D G++ Y APE L ++R+ DV+SFG+ L+E+ YC P F
Sbjct: 169 KDYYVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLR 227
Query: 315 VSS------AVVRQNL------RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
+ A+ R R P CP+ + +M+ CW + + RP + L+
Sbjct: 228 MMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLD 287
Query: 363 AI 364
+
Sbjct: 288 ML 289
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 35/274 (12%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G + V R +EVA+K++D T +L+ F+ EV + + L+HPN
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIID------KTQLNPTSLQKLFR-EVRIMKILNHPN 75
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K L + EY GG + YL+ + R K
Sbjct: 76 IVKLFEVIETEKTLYL--------------------IMEYASGGEVFDYLVAHGRMK--E 113
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
K + + Y H K+IVHRD+K EN+LLD+ +KIADFG + E +
Sbjct: 114 KEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN-EFTVGGKLDA 172
Query: 267 ETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
G Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R R
Sbjct: 173 FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 232
Query: 326 PEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
IP + N++++ N KR + +++K
Sbjct: 233 --IPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W L ++ + +G +G+VY R +A+K+L E A +
Sbjct: 2 KRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 210 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 131/318 (41%), Gaps = 52/318 (16%)
Query: 69 SQRP-KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMA 120
+Q P E+WE + L + G +G V T +VAVK+L A
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STA 88
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXX 179
E AL S E+ + L H N+ +GA + + +
Sbjct: 89 HADEKEALMS----ELKIMSHLGQHENIVNLLGACTHGGPVLVIT--------------- 129
Query: 180 XXXXXEYLPGGNLKQYLIRNRR------------KKLALKIVIQLALDLSRGLSYLHSKK 227
EY G+L +L R R L+ + ++ + +++G+++L SK
Sbjct: 130 -----EYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKN 184
Query: 228 IVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYN 285
+HRDV N+LL + KI DFG+AR + + L +MAPE + Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 286 RRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCW 344
+ DV+S+GI LWEI+ + PYP + +V+ + P P ++ +IM+ CW
Sbjct: 245 VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 304
Query: 345 DANAEKRPEMGEVVKMLE 362
RP ++ L+
Sbjct: 305 ALEPTHRPTFQQICSFLQ 322
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSRR-TDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 210 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 138/306 (45%), Gaps = 65/306 (21%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDW-GEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +GSV YD VAVK L G D + FQ+E+ + +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ----------QRDFQREIQILKA 80
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L + K+ G S G + EYLP G L+ +L R+R
Sbjct: 81 LHSDFIVKYRGVSYGPGRQSL------------------RLVMEYLPSGCLRDFLQRHRA 122
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+ A ++++ + + +G+ YL S++ VHRD+ N+L++S+ +KIADFG+A++ P
Sbjct: 123 RLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL---LP 178
Query: 262 RD----MTGETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YC----------- 302
D + E G + + APE L ++R+ DV+SFG+ L+E+ YC
Sbjct: 179 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 238
Query: 303 ----CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
C+ P LS ++ + R P CP+ + +M+ CW + + RP +
Sbjct: 239 RMMGCERDVPALS---RLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALG 295
Query: 359 KMLEAI 364
L+ +
Sbjct: 296 PQLDML 301
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 138/303 (45%), Gaps = 59/303 (19%)
Query: 89 IAQGTYGSVYRGTYD------NQEVAVKLLDW-GEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +GSV YD VAVK L G D + FQ+E+ + +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQ----------QRDFQREIQILKA 67
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L + K+ G S G + EYLP G L+ +L R+R
Sbjct: 68 LHSDFIVKYRGVSYGPGRQSL------------------RLVMEYLPSGCLRDFLQRHRA 109
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+ A ++++ + + +G+ YL S++ VHRD+ N+L++S+ +KIADFG+A++ P
Sbjct: 110 RLDASRLLL-YSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL---LP 165
Query: 262 RD----MTGETGT--LGYMAPEVLQGKPYNRRCDVYSFGICLWEI--YCCDMPYPDLSFA 313
D + E G + + APE L ++R+ DV+SFG+ L+E+ YC P F
Sbjct: 166 LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL 225
Query: 314 -------DVSS-----AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
DV + ++ + R P CP+ + +M+ CW + + RP + L
Sbjct: 226 RMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQL 285
Query: 362 EAI 364
+ +
Sbjct: 286 DML 288
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 34/282 (12%)
Query: 80 LSKLDMRNLIAQGTYGSVYRGTYDNQE--VAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L ++ + +G +G+VY ++ +A+K+L E A + ++EV
Sbjct: 4 LEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVL------FKAQLEKAGVEHQLRREVE 57
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ L HPN+ + G + + + EY P G + + L
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTVYREL- 96
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
+ K + +L+ LSY HSK+++HRD+K EN+LL S LKIADFG + V
Sbjct: 97 -QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VH 154
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+ ++ +
Sbjct: 155 APSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 213
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ R P +++ + N +RP + EV++
Sbjct: 214 RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 253
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 40/227 (17%)
Query: 88 LIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ +G++G V + QE AVK+++ A +T S+ +EV + +KLDHP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKAS---AKNKDT----STILREVELLKKLDHP 81
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR--KK 203
N+ K +S+ I E GG L +I+ +R +
Sbjct: 82 NIMKLFEILEDSSSFYIVG--------------------ELYTGGELFDEIIKRKRFSEH 121
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARVEAQN 260
A +I+ Q+ G++Y+H IVHRD+K EN+LL+S+ +KI DFG++ QN
Sbjct: 122 DAARIIKQVF----SGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
Query: 261 PRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
+ M GT Y+APEVL+G Y+ +CDV+S G+ L+ + P+
Sbjct: 178 TK-MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 3 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 54
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 55 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 94
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 95 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 152
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + A + R T +GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 153 FGWS-CHAPSSRRTT-LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 211 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 80 LSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L ++ + +G +G+VY R +A+K+L E A + ++EV
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVE 60
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ L HPN+ + G + + + EY P G + + L
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTVYREL- 99
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
+ K + +L+ LSY HSK+++HRD+K EN+LL S LKIADFG + V
Sbjct: 100 -QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VH 157
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+ ++ +
Sbjct: 158 APSSRRTT-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ R P +++ + N +RP + EV++
Sbjct: 217 RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 41/289 (14%)
Query: 70 QRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD--NQEVAVKLLD-----WGEDGMATT 122
+RP + ++ + + ++ +G++G V+ + NQ A+K L +D T
Sbjct: 6 ERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTM 65
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
E L + W+ HP +T NL
Sbjct: 66 VEKRVLSLA-------WE---HPFLTHMFCTFQTKENLFF-------------------- 95
Query: 183 XXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS 242
EYL GG+L ++ K L A ++ GL +LHSK IV+RD+K +N+LLD
Sbjct: 96 VMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDK 153
Query: 243 QRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
+KIADFG+ + GT Y+APE+L G+ YN D +SFG+ L+E+
Sbjct: 154 DGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213
Query: 303 CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ ++ ++ N P PR +++ K + EKR
Sbjct: 214 GQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDLLVKLFVREPEKR 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 131/296 (44%), Gaps = 37/296 (12%)
Query: 66 RNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTA 123
+NE + K +W L ++ + +G +G+VY R +A+K+L
Sbjct: 22 KNEESK-KRQWA--LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQL 72
Query: 124 ETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXX 183
E A + ++EV + L HPN+ + G + + +
Sbjct: 73 EKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------I 112
Query: 184 XEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
EY P G + + L + K + +L+ LSY HSK+++HRD+K EN+LL S
Sbjct: 113 LEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSA 170
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
LKIADFG + + RD GTL Y+ PE+++G+ ++ + D++S G+ +E
Sbjct: 171 GELKIADFGWSVHAPSSRRDDL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P+ ++ + + R P +++ + N +RP + EV++
Sbjct: 229 KPPFEANTYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 282
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 7 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 59 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPRG 98
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 99 EVYKEL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 156
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 157 FGWS-VHAPSSRRXXL-XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 214
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 215 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 261
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 130/314 (41%), Gaps = 53/314 (16%)
Query: 74 EEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMATTAETA 126
E+WE + L + G +G V T +VAVK+L A E
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STAHADEKE 94
Query: 127 ALRSSFQQEVAVWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXE 185
AL S E+ + L H N+ +GA + + + E
Sbjct: 95 ALMS----ELKIMSHLGQHENIVNLLGACTHGGPVLVIT--------------------E 130
Query: 186 YLPGGNLKQYLIRNR--------------RKKLALKIVIQLALDLSRGLSYLHSKKIVHR 231
Y G+L +L R R ++L+ + ++ + +++G+++L SK +HR
Sbjct: 131 YCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASKNCIHR 190
Query: 232 DVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYNRRCD 289
DV N+LL + KI DFG+AR + + L +MAPE + Y + D
Sbjct: 191 DVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSD 250
Query: 290 VYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANA 348
V+S+GI LWEI+ + PYP + +V+ + P P ++ +IM+ CW
Sbjct: 251 VWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEP 310
Query: 349 EKRPEMGEVVKMLE 362
RP ++ L+
Sbjct: 311 THRPTFQQICSFLQ 324
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 126/282 (44%), Gaps = 34/282 (12%)
Query: 80 LSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L ++ + +G +G+VY R +A+K+L E A + ++EV
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVE 60
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ L HPN+ + G + + + EY P G + + L
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTVYREL- 99
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
+ K + +L+ LSY HSK+++HRD+K EN+LL S LKIADFG + V
Sbjct: 100 -QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VH 157
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+ ++ +
Sbjct: 158 APSSRR-TELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 216
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ R P +++ + N +RP + EV++
Sbjct: 217 RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 103/217 (47%), Gaps = 29/217 (13%)
Query: 87 NLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
N +G +G VY+G +N VAVK L D TT E L+ F QE+ V K H N
Sbjct: 28 NKXGEGGFGVVYKGYVNNTTVAVKKLAAMVD--ITTEE---LKQQFDQEIKVXAKCQHEN 82
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL-IRNRRKKLA 205
+ + +G S +L + Y P G+L L + L+
Sbjct: 83 LVELLGFSSDGDDLCL--------------------VYVYXPNGSLLDRLSCLDGTPPLS 122
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMT 265
++A + G+++LH +HRD+K+ N+LLD T KI+DFG+AR + + +
Sbjct: 123 WHXRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 266 GE--TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
GT Y APE L+G+ + D+YSFG+ L EI
Sbjct: 183 XSRIVGTTAYXAPEALRGE-ITPKSDIYSFGVVLLEI 218
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 210 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + L + + S+D LK+++ + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD---------------------LKKFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K EN+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + L + + S+D LK+++ + + L
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMD---------------------LKKFMDASALTGIPL 103
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K EN+L++++ +K+ADFG+AR R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 164 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 83 LDMRNL-----IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQE 135
+DM N I +GTYG VY R + VA+K + ET + S+ +E
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIRE 56
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
+++ ++L+HPN+ K + + T N E+L +LK++
Sbjct: 57 ISLLKELNHPNIVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKF 95
Query: 196 LIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
+ + + L ++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR
Sbjct: 96 MDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
R T E TL Y APE+L G C YS + +W + C
Sbjct: 156 AFGVPVRTYTHEVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 197
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 5 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 96
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIA+
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 154
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 155 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GLS+ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 103 PLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 124/282 (43%), Gaps = 34/282 (12%)
Query: 80 LSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L ++ + +G +G+VY R +A+K+L E A + ++EV
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVE 63
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ L HPN+ + G + + + EY P G + + L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTVYREL- 102
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
+ K + +L+ LSY HSK+++HRD+K EN+LL S LKIADFG +
Sbjct: 103 -QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHA 161
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
+ RD GTL Y+ PE+++G+ ++ + D++S G+ +E P+ ++ +
Sbjct: 162 PSSRRDDL--CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ R P +++ + N +RP + EV++
Sbjct: 220 RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 130/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 4 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 55
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 95
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIA+
Sbjct: 96 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAN 153
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R T GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 154 FGWS-VHAPSSRRTTL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 212 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 125/285 (43%), Gaps = 19/285 (6%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTA-----ETAALRSSFQQEVAVWQKLD 143
I +G +G V+ Q A LL + M +A +++ FQ+E A+ + D
Sbjct: 55 IGEGAFGRVF------QARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD 108
Query: 144 HPNVTKFVGA-SVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRK 202
+PN+ K +G +VG + A D N L +L +
Sbjct: 109 NPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCS-LSHSDLSTRARVSSPG 167
Query: 203 KLALKIVIQLAL--DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR--VEA 258
L QL + ++ G++YL +K VHRD+ T N L+ +KIADFG++R A
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSS 317
+ + + +M PE + Y DV+++G+ LWEI+ + PY ++ +V
Sbjct: 228 DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY 287
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
V N+ P CP L N+MR CW RP + ++L+
Sbjct: 288 YVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQ 331
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 91/171 (53%), Gaps = 6/171 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ G L +Y+ L++ I + G+ + H +IVHRD+K +N+L+DS +
Sbjct: 91 EYIEGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK 148
Query: 245 TLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
TLKI DFG+A+ ++ T GT+ Y +PE +G+ + D+YS GI L+E+
Sbjct: 149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208
Query: 304 DMPYPDLSFADVSSAVVRQ---NLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+ P+ + ++ ++ N+ ++ + P SL+N++ + + + R
Sbjct: 209 EPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANR 259
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 2 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 54 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 94 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 152 FGWS-VHAPSSRRXX-LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 209
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 210 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 256
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 4 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 55
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 56 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 95
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 96 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 153
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 154 FGWS-VHAPSSRRXXL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 211
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 212 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
K +W ++ ++ + +G +G+VY R +A+K+L E A +
Sbjct: 5 KRQWALE--DFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEH 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++EV + L HPN+ + G + + + EY P G
Sbjct: 57 QLRREVEIQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLG 96
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
+ + L + K + +L+ LSY HSK+++HRD+K EN+LL S LKIAD
Sbjct: 97 TVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIAD 154
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG + V A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+
Sbjct: 155 FGWS-VHAPSSRRXXL-CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 212
Query: 311 SFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
++ + + R P +++ + N +RP + EV++
Sbjct: 213 TYQETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 34/282 (12%)
Query: 80 LSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L ++ + +G +G+VY R +A+K+L E A + ++EV
Sbjct: 10 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL------FKAQLEKAGVEHQLRREVE 63
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ L HPN+ + G + + + EY P G + + L
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYL--------------------ILEYAPLGTVYREL- 102
Query: 198 RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVE 257
+ K + +L+ LSY HSK+++HRD+K EN+LL S LKIADFG + V
Sbjct: 103 -QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWS-VH 160
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
A + R GTL Y+ PE+++G+ ++ + D++S G+ +E P+ ++ +
Sbjct: 161 APSSRR-AALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 219
Query: 318 AVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ R P +++ + N +RP + EV++
Sbjct: 220 RISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 259
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 36/225 (16%)
Query: 88 LIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ +G++G V + QE AVK+++ A +T S+ +EV + +KLDHP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDT----STILREVELLKKLDHP 81
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
N+ K +S+ I E GG L +I+ RK+ +
Sbjct: 82 NIMKLFEILEDSSSFYIVG--------------------ELYTGGELFDEIIK--RKRFS 119
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARVEAQNPR 262
++ + G++Y+H IVHRD+K EN+LL+S+ +KI DFG++ QN +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 263 DMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
M GT Y+APEVL+G Y+ +CDV+S G+ L+ + P+
Sbjct: 180 -MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 65 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 103
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 163
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 164 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 130/318 (40%), Gaps = 52/318 (16%)
Query: 69 SQRP-KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQ-------EVAVKLLDWGEDGMA 120
+Q P E+WE + L + G +G V T +VAVK+L A
Sbjct: 33 TQLPYNEKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK----STA 88
Query: 121 TTAETAALRSSFQQEVAVWQKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXX 179
E AL S E+ + L H N+ +GA + + +
Sbjct: 89 HADEKEALMS----ELKIMSHLGQHENIVNLLGACTHGGPVLVIT--------------- 129
Query: 180 XXXXXEYLPGGNLKQYLIRNRR------------KKLALKIVIQLALDLSRGLSYLHSKK 227
EY G+L +L R R + + ++ + +++G+++L SK
Sbjct: 130 -----EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN 184
Query: 228 IVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKPYN 285
+HRDV N+LL + KI DFG+AR + + L +MAPE + Y
Sbjct: 185 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYT 244
Query: 286 RRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCW 344
+ DV+S+GI LWEI+ + PYP + +V+ + P P ++ +IM+ CW
Sbjct: 245 VQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACW 304
Query: 345 DANAEKRPEMGEVVKMLE 362
RP ++ L+
Sbjct: 305 ALEPTHRPTFQQICSFLQ 322
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 63 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 162 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 139/315 (44%), Gaps = 71/315 (22%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQ-- 140
L + + A+G +G V++ N+ VAVK+ + + S+Q E V+
Sbjct: 26 LQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD------------KQSWQNEYEVYSLP 73
Query: 141 KLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
+ H N+ +F+GA + SVD + + G+L +L N
Sbjct: 74 GMKHENILQFIGAE---------KRGTSVDVDLWLITA-------FHEKGSLSDFLKAN- 116
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSK----------KIVHRDVKTENMLLDSQRTLKIAD 250
++ + +A ++RGL+YLH I HRD+K++N+LL + T IAD
Sbjct: 117 --VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174
Query: 251 FGVA-RVEA-QNPRDMTGETGTLGYMAPEVLQGK-PYNR----RCDVYSFGICLWEI--- 300
FG+A + EA ++ D G+ GT YMAPEVL+G + R R D+Y+ G+ LWE+
Sbjct: 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASR 234
Query: 301 -YCCDMPYPDL------------SFADVSSAVVRQNLRPEI-----PRCCPSSLANIMRK 342
D P + S D+ VV + RP + + L + +
Sbjct: 235 CTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEE 294
Query: 343 CWDANAEKRPEMGEV 357
CWD +AE R G V
Sbjct: 295 CWDHDAEARLSAGCV 309
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 112/225 (49%), Gaps = 36/225 (16%)
Query: 88 LIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ +G++G V + QE AVK+++ A +T S+ +EV + +KLDHP
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDT----STILREVELLKKLDHP 81
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
N+ K +S+ I E GG L +I+ RK+ +
Sbjct: 82 NIMKLFEILEDSSSFYIVG--------------------ELYTGGELFDEIIK--RKRFS 119
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARVEAQNPR 262
++ + G++Y+H IVHRD+K EN+LL+S+ +KI DFG++ QN +
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK 179
Query: 263 DMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
M GT Y+APEVL+G Y+ +CDV+S G+ L+ + P+
Sbjct: 180 -MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 71 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 109
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 170 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 200
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 63 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 162 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 128/293 (43%), Gaps = 41/293 (13%)
Query: 78 IDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLL---DWGEDGMATTAETAALRSSFQQ 134
ID +L+ + + G +++G + ++ VK+L DW + F +
Sbjct: 7 IDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDW----------STRKSRDFNE 56
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E + HPNV +GA P+ ++ + P G+L
Sbjct: 57 ECPRLRIFSHPNVLPVLGACQSP-----PAPHPTL-------------ITHWXPYGSLYN 98
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENMLLDSQRTLKIADFG 252
L + ++ ALD +RG ++LH+ + I + + ++ +D T +I+
Sbjct: 99 VLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTARISXAD 158
Query: 253 VARVEAQNPRDMTGETGTLGYMAPEVLQGKP--YNRR-CDVYSFGICLWEIYCCDMPYPD 309
V + Q+P G ++APE LQ KP NRR D +SF + LWE+ ++P+ D
Sbjct: 159 V-KFSFQSP----GRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFAD 213
Query: 310 LSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLE 362
LS ++ V + LRP IP ++ + + C + + KRP+ +V +LE
Sbjct: 214 LSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPILE 266
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 71 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 109
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 110 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 169
Query: 267 ETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYP 308
E TL Y APE+L G K Y+ D++S G E+ +P
Sbjct: 170 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 31/223 (13%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 162
Query: 267 ETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYP 308
E TL Y APE+L G K Y+ D++S G E+ +P
Sbjct: 163 EVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFP 205
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + L + + S+D LK ++ + + L
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMD---------------------LKDFMDASALTGIPL 104
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 165 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + L + + S+D LK ++ + + L
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMD---------------------LKDFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L L+ +I + +++G+ +L S+K +HRD+ N+LL + +KI DFG+AR ++P
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254
Query: 264 MTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVV 320
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 255 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 314
Query: 321 RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
++ R P + M CW +RP E+V+ L
Sbjct: 315 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 66 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 104
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K EN+L++++ +K+ADFG+AR R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 165 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L L+ +I + +++G+ +L S+K +HRD+ N+LL + +KI DFG+AR ++P
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256
Query: 264 MTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVV 320
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 257 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 316
Query: 321 RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
++ R P + M CW +RP E+V+ L
Sbjct: 317 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L L+ +I + +++G+ +L S+K +HRD+ N+LL + +KI DFG+AR ++P
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247
Query: 264 MTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVV 320
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 248 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 307
Query: 321 RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
++ R P + M CW +RP E+V+ L
Sbjct: 308 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 3/161 (1%)
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L L+ +I + +++G+ +L S+K +HRD+ N+LL + +KI DFG+AR ++P
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249
Query: 264 MTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVV 320
+ L +MAPE + + Y + DV+SFG+ LWEI+ PYP + + +
Sbjct: 250 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 321 RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKML 361
++ R P + M CW +RP E+V+ L
Sbjct: 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 65 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 103
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K EN+L++++ +K+ADFG+AR R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 164 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 138/329 (41%), Gaps = 75/329 (22%)
Query: 82 KLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ M I +G YG V+ G + ++VAVK+ TT E + R E ++Q
Sbjct: 38 QIQMVKQIGKGRYGEVWMGKWRGEKVAVKVF-------FTTEEASWFR-----ETEIYQT 85
Query: 142 --LDHPNVTKFVGASV-GTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
+ H N+ F+ A + GT + +Y G+L YL
Sbjct: 86 VLMRHENILGFIAADIKGTGSW-----------------TQLYLITDYHENGSLYDYL-- 126
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIAD 250
+ L K +++LA GL +LH++ I HRD+K++N+L+ T IAD
Sbjct: 127 -KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185
Query: 251 FGVA--RVEAQNPRDMTGET--GTLGYMAPEVLQGKPYNRR-------CDVYSFGICLWE 299
G+A + N D+ T GT YM PEVL + NR D+YSFG+ LWE
Sbjct: 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLD-ESLNRNHFQSYIMADMYSFGLILWE 244
Query: 300 IY--CC--------DMPYPDL-----SFADVSSAVVRQNLRPEIPRC-----CPSSLANI 339
+ C +PY DL S+ D+ V + LRP P C + +
Sbjct: 245 VARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKL 304
Query: 340 MRKCWDANAEKRPEMGEVVKMLEAIDTSK 368
M +CW N R V K L + S+
Sbjct: 305 MTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 119/274 (43%), Gaps = 39/274 (14%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQ---EVAVW 139
D+ + +G+YGSVY+ + E G + + S Q+ E+++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHK------------ETGQIVAIKQVPVESDLQEIIKEISIM 78
Query: 140 QKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN 199
Q+ D P+V K+ G+ ++L I EY G++ +IR
Sbjct: 79 QQCDSPHVVKYYGSYFKNTDLWI--------------------VMEYCGAGSVSD-IIRL 117
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
R K L + + +GL YLH + +HRD+K N+LL+++ K+ADFGVA
Sbjct: 118 RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAV 319
GT +MAPEV+Q YN D++S GI E+ PY D+ + +
Sbjct: 178 XMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-AIFM 236
Query: 320 VRQNLRPEI--PRCCPSSLANIMRKCWDANAEKR 351
+ N P P + + +++C + E+R
Sbjct: 237 IPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQR 270
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 103/217 (47%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + L + + D LK ++ + + L
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQD---------------------LKTFMDASALTGIPL 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH 161
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 162 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
I +GTYG VY+ V L D ET + S+ +E+++ ++L+HPN+
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLD-----TETEGVPSTAIREISLLKELNHPNIV 65
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
K + + T N E+L +LK+++ + + L +
Sbjct: 66 KLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPLPL 104
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET 268
+ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T E
Sbjct: 105 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 164
Query: 269 GTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
TL Y APE+L G C YS + +W + C
Sbjct: 165 VTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 32/215 (14%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
I +GTYG VY+ V L D ET + S+ +E+++ ++L+HPN+
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLD-----TETEGVPSTAIREISLLKELNHPNIV 64
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
K + + T N E+L +LK+++ + + L +
Sbjct: 65 KLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPLPL 103
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET 268
+ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R T E
Sbjct: 104 IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEV 163
Query: 269 GTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
TL Y APE+L G C YS + +W + C
Sbjct: 164 VTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK ++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKDFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K EN+L++++ +K+ADFG+AR R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 38/225 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ G YG V R + E A+K++ T+ + + S +EVAV + LDHPN
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKII-------RKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNRRKKLA 205
+ K N + E GG L +I R + ++
Sbjct: 98 IMKLYDFFEDKRNYYL--------------------VMECYKGGELFDEIIHRMKFNEVD 137
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARVEAQNPR 262
++I+ L G++YLH IVHRD+K EN+LL+S+ +KI DFG++ V +N +
Sbjct: 138 AAVIIKQVLS---GVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV-FENQK 193
Query: 263 DMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
M GT Y+APEVL+ K Y+ +CDV+S G+ L+ + P+
Sbjct: 194 KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 67 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 66 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 104
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 165 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 67 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 68 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 106
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 107 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 166
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 167 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 197
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 66 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 104
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 105 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 164
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 165 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 195
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 63 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 162 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 65 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 103
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 164 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 63 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 102 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 161
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 162 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 192
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 119/235 (50%), Gaps = 29/235 (12%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 49 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 88
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 89 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 146
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q +M E GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 147 IKLCDFGVS---GQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPS-SLANIMRKCWDANAEKRPEMGEVV 358
P P ++ ++ +V + P++P S + + KC N +R ++ +++
Sbjct: 204 YPRPPMAIFELLDYIVNEP-PPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLM 257
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 106/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N K+ VD + LK+++ + + L
Sbjct: 67 IVKLLDV-IHTEN-KLYLVFEHVDQD-------------------LKKFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 65 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 103
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 104 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 163
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 164 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 194
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK+++ + + L
Sbjct: 64 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKKFMDASALTGIPL 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 103 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 162
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 163 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 193
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 89 IAQGTYGSVYRGT-------YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +G V+ D VAVK L +E+A R FQ+E +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------EASESA--RQDFQREAELLTM 99
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L H ++ +F G L + EY+ G+L ++L +
Sbjct: 100 LQHQHIVRFFGVCTEGRPLLM--------------------VFEYMRHGDLNRFLRSHGP 139
Query: 200 -----------RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L L ++ +A ++ G+ YL VHRD+ T N L+ +KI
Sbjct: 140 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 199
Query: 249 ADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DM 305
DFG++R + + + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
P+ LS + + Q E PR CP + IMR CW ++R + +V L+A+
Sbjct: 260 PWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 89 IAQGTYGSVYRGT-------YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +G V+ D VAVK L +E+A R FQ+E +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------EASESA--RQDFQREAELLTM 70
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L H ++ +F G L + EY+ G+L ++L +
Sbjct: 71 LQHQHIVRFFGVCTEGRPLLM--------------------VFEYMRHGDLNRFLRSHGP 110
Query: 200 -----------RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L L ++ +A ++ G+ YL VHRD+ T N L+ +KI
Sbjct: 111 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 170
Query: 249 ADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DM 305
DFG++R + + + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 171 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 230
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
P+ LS + + Q E PR CP + IMR CW ++R + +V L+A+
Sbjct: 231 PWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 288
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 126/299 (42%), Gaps = 53/299 (17%)
Query: 89 IAQGTYGSVYRGT-------YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
+ +G +G V+ D VAVK L +E+A R FQ+E +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALK-------EASESA--RQDFQREAELLTM 76
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L H ++ +F G L + EY+ G+L ++L +
Sbjct: 77 LQHQHIVRFFGVCTEGRPLLM--------------------VFEYMRHGDLNRFLRSHGP 116
Query: 200 -----------RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
L L ++ +A ++ G+ YL VHRD+ T N L+ +KI
Sbjct: 117 DAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKI 176
Query: 249 ADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC-DM 305
DFG++R + + + + G T + +M PE + + + DV+SFG+ LWEI+
Sbjct: 177 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 236
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAI 364
P+ LS + + Q E PR CP + IMR CW ++R + +V L+A+
Sbjct: 237 PWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 294
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +GTYG VY R + VA+K + ET + S+ +E+++ ++L+HPN
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALK-------KIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K + + T N E+L +LK ++ + + L
Sbjct: 67 IVKLLDV-IHTEN-------------------KLYLVFEFL-HQDLKTFMDASALTGIPL 105
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ L +GL++ HS +++HRD+K +N+L++++ +K+ADFG+AR R
Sbjct: 106 PLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH 165
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
E TL Y APE+L G C YS + +W + C
Sbjct: 166 EVVTLWYRAPEILLG------CKYYSTAVDIWSLGCI 196
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 131/319 (41%), Gaps = 60/319 (18%)
Query: 75 EWEIDLSKLDMRNLIAQGTYGSVYRGTYD-------NQEVAVKLLDWGEDGMATTAETAA 127
+WE L+ ++ G +G V T + +VAVK+L D ++E A
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD----SSEREA 94
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
L S + + Q H N+ +GA + + + EY
Sbjct: 95 LMSELKM---MTQLGSHENIVNLLGACTLSGPIYL--------------------IFEYC 131
Query: 188 PGGNLKQYLIRNRRKK----------------------LALKIVIQLALDLSRGLSYLHS 225
G+L YL R++R+K L + ++ A +++G+ +L
Sbjct: 132 CYGDLLNYL-RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
Query: 226 KKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL--GYMAPEVLQGKP 283
K VHRD+ N+L+ + +KI DFG+AR + + L +MAPE L
Sbjct: 191 KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGI 250
Query: 284 YNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRK 342
Y + DV+S+GI LWEI+ + PYP + +++ + + P + IM+
Sbjct: 251 YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQS 310
Query: 343 CWDANAEKRPEMGEVVKML 361
CW ++ KRP + L
Sbjct: 311 CWAFDSRKRPSFPNLTSFL 329
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 128/322 (39%), Gaps = 77/322 (23%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ +G YG V+RG + + VAVK+ D + ET + L H N+
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIFS-SRDEQSWFRETEIYNTVL---------LRHDNIL 65
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
F+ + + + N Y G+L +L +R+ L +
Sbjct: 66 GFIASDMTSRN----------------SSTQLWLITHYHEHGSLYDFL---QRQTLEPHL 106
Query: 209 VIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ- 259
++LA+ + GL++LH + I HRD K+ N+L+ S IAD G+A + +Q
Sbjct: 107 ALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG 166
Query: 260 --------NPRDMTGETGTLGYMAPEVLQGKPYN------RRCDVYSFGICLWEIY---- 301
NPR GT YMAPEVL + + D+++FG+ LWEI
Sbjct: 167 SDYLDIGNNPR-----VGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTI 221
Query: 302 -----------CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCP-----SSLANIMRKCWD 345
D+ D SF D+ V P IP S LA +MR+CW
Sbjct: 222 VNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWY 281
Query: 346 ANAEKRPEMGEVVKMLEAIDTS 367
N R + K L+ I S
Sbjct: 282 PNPSARLTALRIKKTLQKISNS 303
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I G+YG R D + + K LD+G T AE L S EV + ++L HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAEKQMLVS----EVNLLRELKHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR--NRRKKL 204
+ ++ + +N + EY GG+L + + R+ L
Sbjct: 67 IVRYYDRIIDRTNTTL------------------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 205 ALKIVIQLALDLSRGLSYLHSKK-----IVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ V+++ L+ L H + ++HRD+K N+ LD ++ +K+ DFG+AR+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA- 318
+ GT YM+PE + YN + D++S G L+E+ C MP P +F+ A
Sbjct: 169 DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAG 226
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+R+ IP L I+ + + RP + E+++
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 47/298 (15%)
Query: 68 ESQRPKEEWEIDLSKLDMRNLIAQ---GTYGSVYRGTYDNQEV--AVKLLDWGEDGMATT 122
+S + E DL+ D +I + G +G VY+ V A K++D T
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TK 73
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
+E + E+ + DHPN+ K + A +NL I
Sbjct: 74 SEEEL--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWI-------------------- 111
Query: 183 XXEYLPGGNLKQYLIRNRR--KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
E+ GG + ++ R + +++V + LD L+YLH KI+HRD+K N+L
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILF 168
Query: 241 DSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-----QGKPYNRRCDVYSFGI 295
+K+ADFGV+ + + GT +MAPEV+ + +PY+ + DV+S GI
Sbjct: 169 TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 296 CLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEKR 351
L E+ + P+ +L+ V + + P + P S+ + ++KC + N + R
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I G+YG R D + + K LD+G T AE L S EV + ++L HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAEKQMLVS----EVNLLRELKHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR--NRRKKL 204
+ ++ + +N + EY GG+L + + R+ L
Sbjct: 67 IVRYYDRIIDRTNTTL------------------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 205 ALKIVIQLALDLSRGLSYLHSKK-----IVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ V+++ L+ L H + ++HRD+K N+ LD ++ +K+ DFG+AR+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA- 318
+ GT YM+PE + YN + D++S G L+E+ C MP P +F+ A
Sbjct: 169 DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAG 226
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+R+ IP L I+ + + RP + E+++
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 132/298 (44%), Gaps = 47/298 (15%)
Query: 68 ESQRPKEEWEIDLSKLDMRNLIAQ---GTYGSVYRGTYDNQEV--AVKLLDWGEDGMATT 122
+S + E DL+ D +I + G +G VY+ V A K++D T
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TK 73
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
+E + E+ + DHPN+ K + A +NL I
Sbjct: 74 SEEEL--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWI-------------------- 111
Query: 183 XXEYLPGGNLKQYLIRNRR--KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
E+ GG + ++ R + +++V + LD L+YLH KI+HRD+K N+L
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILF 168
Query: 241 DSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL-----QGKPYNRRCDVYSFGI 295
+K+ADFGV+ + + GT +MAPEV+ + +PY+ + DV+S GI
Sbjct: 169 TLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 296 CLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEKR 351
L E+ + P+ +L+ V + + P + P S+ + ++KC + N + R
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 124/266 (46%), Gaps = 41/266 (15%)
Query: 86 RNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD 143
+ ++ +G++G V + QE AVK++ + T E S +EV + ++LD
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLD 84
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR-- 201
HPN+ K + E GG L +I +R
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVG--------------------EVYTGGELFDEIISRKRFS 124
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEA 258
+ A +I+ Q+ G++Y+H KIVHRD+K EN+LL+S+ ++I DFG++
Sbjct: 125 EVDAARIIRQVL----SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THF 179
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
+ + M + GT Y+APEVL G Y+ +CDV+S G+ L+ + P+ + D+
Sbjct: 180 EASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKK 238
Query: 319 VVRQNLRPEIP--RCCPSSLANIMRK 342
V + E+P + S +++RK
Sbjct: 239 VEKGKYTFELPQWKKVSESAKDLIRK 264
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 135/327 (41%), Gaps = 77/327 (23%)
Query: 82 KLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ + + +G YG V+RG++ + VAVK+ ++ E + R + E+
Sbjct: 38 QITLLECVGKGRYGEVWRGSWQGENVAVKIF-------SSRDEKSWFR---ETELYNTVM 87
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L H N+ F+ + D Y G+L YL +
Sbjct: 88 LRHENILGFIAS----------------DMTSRHSSTQLWLITHYHEMGSLYDYL---QL 128
Query: 202 KKLALKIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGV 253
L +++ L ++ GL++LH + I HRD+K++N+L+ IAD G+
Sbjct: 129 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 188
Query: 254 ARVEAQ---------NPRDMTGETGTLGYMAPEVL----QGKPYN--RRCDVYSFGICLW 298
A + +Q NPR GT YMAPEVL Q ++ +R D+++FG+ LW
Sbjct: 189 AVMHSQSTNQLDVGNNPR-----VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 243
Query: 299 EIY---------------CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS-----SLAN 338
E+ D+ D SF D+ V RP IP S SLA
Sbjct: 244 EVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAK 303
Query: 339 IMRKCWDANAEKRPEMGEVVKMLEAID 365
+M++CW N R + K L ID
Sbjct: 304 LMKECWYQNPSARLTALRIKKTLTKID 330
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 86 RNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD 143
+ ++ +G++G V + QE AVK++ + T E S +EV + ++LD
Sbjct: 54 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLD 107
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNRRK 202
HPN+ K + E GG L +I R R
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVG--------------------EVYTGGELFDEIISRKRFS 147
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQ 259
++ +I+ L G++Y+H KIVHRD+K EN+LL+S+ ++I DFG++ +
Sbjct: 148 EVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFE 203
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAV 319
+ M + GT Y+APEVL G Y+ +CDV+S G+ L+ + P+ + D+ V
Sbjct: 204 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 262
Query: 320 VRQNLRPEIP--RCCPSSLANIMRK 342
+ E+P + S +++RK
Sbjct: 263 EKGKYTFELPQWKKVSESAKDLIRK 287
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 131/322 (40%), Gaps = 67/322 (20%)
Query: 82 KLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ + + +G YG V+RG++ + VAVK+ D + ET +
Sbjct: 9 QITLLECVGKGRYGEVWRGSWQGENVAVKIFS-SRDEKSWFRETELYNTVM--------- 58
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L H N+ F+ + D Y G+L YL +
Sbjct: 59 LRHENILGFIAS----------------DMTSRHSSTQLWLITHYHEMGSLYDYL---QL 99
Query: 202 KKLALKIVIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGV 253
L +++ L ++ GL++LH + I HRD+K++N+L+ IAD G+
Sbjct: 100 TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGL 159
Query: 254 ARVEAQNPRDM----TGETGTLGYMAPEVL----QGKPYN--RRCDVYSFGICLWEIY-- 301
A + +Q+ + GT YMAPEVL Q ++ +R D+++FG+ LWE+
Sbjct: 160 AVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
Query: 302 -------------CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS-----SLANIMRKC 343
D+ D SF D+ V RP IP S SLA +M++C
Sbjct: 220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279
Query: 344 WDANAEKRPEMGEVVKMLEAID 365
W N R + K L ID
Sbjct: 280 WYQNPSARLTALRIKKTLTKID 301
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 131/315 (41%), Gaps = 67/315 (21%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ +G YG V+RG++ + VAVK+ ++ E + R + E+ L H N+
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIF-------SSRDEKSWFRET---ELYNTVMLRHENIL 65
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
F+ + D Y G+L YL + L
Sbjct: 66 GFIAS----------------DMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVS 106
Query: 209 VIQLALDLSRGLSYLHSK--------KIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN 260
+++ L ++ GL++LH + I HRD+K++N+L+ IAD G+A + +Q+
Sbjct: 107 CLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQS 166
Query: 261 PRDM----TGETGTLGYMAPEVL----QGKPYN--RRCDVYSFGICLWEIY--------- 301
+ GT YMAPEVL Q ++ +R D+++FG+ LWE+
Sbjct: 167 TNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIV 226
Query: 302 ------CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS-----SLANIMRKCWDANAEK 350
D+ D SF D+ V RP IP S SLA +M++CW N
Sbjct: 227 EDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSA 286
Query: 351 RPEMGEVVKMLEAID 365
R + K L ID
Sbjct: 287 RLTALRIKKTLTKID 301
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 89 IAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I G+YG R D + + K LD+G T AE L S EV + ++L HPN
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGS---MTEAEKQMLVS----EVNLLRELKHPN 66
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR--NRRKKL 204
+ ++ + +N + EY GG+L + + R+ L
Sbjct: 67 IVRYYDRIIDRTNTTL------------------YIVMEYCEGGDLASVITKGTKERQYL 108
Query: 205 ALKIVIQLALDLSRGLSYLHSKK-----IVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ V+++ L+ L H + ++HRD+K N+ LD ++ +K+ DFG+AR+
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH 168
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA- 318
+ GT YM+PE + YN + D++S G L+E+ C MP P +F+ A
Sbjct: 169 DEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL-CALMP-PFTAFSQKELAG 226
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+R+ IP L I+ + + RP + E+++
Sbjct: 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 86 RNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD 143
+ ++ +G++G V + QE AVK++ + T E S +EV + ++LD
Sbjct: 55 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLD 108
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNRRK 202
HPN+ K + E GG L +I R R
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVG--------------------EVYTGGELFDEIISRKRFS 148
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQ 259
++ +I+ L G++Y+H KIVHRD+K EN+LL+S+ ++I DFG++ +
Sbjct: 149 EVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFE 204
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAV 319
+ M + GT Y+APEVL G Y+ +CDV+S G+ L+ + P+ + D+ V
Sbjct: 205 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 263
Query: 320 VRQNLRPEIP--RCCPSSLANIMRK 342
+ E+P + S +++RK
Sbjct: 264 EKGKYTFELPQWKKVSESAKDLIRK 288
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 135/301 (44%), Gaps = 53/301 (17%)
Query: 68 ESQRPKEEWEIDLSKLDMRNLIAQ---GTYGSVYRGTYDNQEV--AVKLLDWGEDGMATT 122
+S + E DL+ D +I + G +G VY+ V A K++D T
Sbjct: 21 QSMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVID-------TK 73
Query: 123 AETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
+E + E+ + DHPN+ K + A +NL I
Sbjct: 74 SEEEL--EDYMVEIDILASCDHPNIVKLLDAFYYENNLWI-------------------- 111
Query: 183 XXEYLPGGNLKQYLIRNRR--KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
E+ GG + ++ R + +++V + LD L+YLH KI+HRD+K N+L
Sbjct: 112 LIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILF 168
Query: 241 DSQRTLKIADFGVARVEAQNPRDMTGE---TGTLGYMAPEVL-----QGKPYNRRCDVYS 292
+K+ADFGV+ A+N R + GT +MAPEV+ + +PY+ + DV+S
Sbjct: 169 TLDGDIKLADFGVS---AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 225
Query: 293 FGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEK 350
GI L E+ + P+ +L+ V + + P + P S+ + ++KC + N +
Sbjct: 226 LGITLIEMAEIEPPHHELNPMRVLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDA 284
Query: 351 R 351
R
Sbjct: 285 R 285
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 107/244 (43%), Gaps = 33/244 (13%)
Query: 85 MRNLIAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
++ I +G + V R +EVAVK++D T +L+ F+ EV + + L
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIID------KTQLNPTSLQKLFR-EVRIMKIL 71
Query: 143 DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRK 202
+HPN+ K L + EY GG + YL+ + R
Sbjct: 72 NHPNIVKLFEVIETEKTLYL--------------------VMEYASGGEVFDYLVAHGRM 111
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPR 262
K K + + Y H K IVHRD+K EN+LLD +KIADFG + E
Sbjct: 112 K--EKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSN-EFTVGN 168
Query: 263 DMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
+ G+ Y APE+ QGK Y+ DV+S G+ L+ + +P+ + ++ V+R
Sbjct: 169 KLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLR 228
Query: 322 QNLR 325
R
Sbjct: 229 GKYR 232
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 36/278 (12%)
Query: 88 LIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAALRSS--FQQEVAVWQKLD 143
++ G +G+VY+G + D + V + + + E + +++ E V +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPV------AIKVLRENTSPKANKEILDEAYVMAGVG 77
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKK 203
P V++ +G + TS +++ + + +P G L + +R R +
Sbjct: 78 SPYVSRLLGICL-TSTVQLVT--------------------QLMPYGCLLDH-VRENRGR 115
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L + ++ + +++G+SYL ++VHRD+ N+L+ S +KI DFG+AR+ + +
Sbjct: 116 LGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
Query: 264 MTGETG--TLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM-PYPDLSFADVSSAVV 320
+ G + +MA E + + + + DV+S+G+ +WE+ PY + ++ +
Sbjct: 176 YHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLE 235
Query: 321 RQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
+ P+ P C + IM KCW ++E RP E+V
Sbjct: 236 KGERLPQ-PPICTIDVYMIMVKCWMIDSECRPRFRELV 272
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 107/225 (47%), Gaps = 37/225 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ G YG V + E A+K++ + + TT+ + AL EVAV ++LDHPN
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIK--KSSVTTTSNSGALLD----EVAVLKQLDHPN 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K N + + Y G + ++R + ++
Sbjct: 66 IMKLYEFFEDKRNYYLVMEV-------------------YRGGELFDEIILRQKFSEVDA 106
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGV-ARVEAQNPR 262
++++ L G +YLH IVHRD+K EN+LL+S+ +KI DFG+ A E
Sbjct: 107 AVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK- 162
Query: 263 DMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
M GT Y+APEVL+ K Y+ +CDV+S G+ L+ + C P+
Sbjct: 163 -MKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 123/265 (46%), Gaps = 39/265 (14%)
Query: 86 RNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD 143
+ ++ +G++G V + QE AVK++ + T E S +EV + ++LD
Sbjct: 37 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLD 90
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNRRK 202
HPN+ K + E GG L +I R R
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVG--------------------EVYTGGELFDEIISRKRFS 130
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQ 259
++ +I+ L G++Y+H KIVHRD+K EN+LL+S+ ++I DFG++ +
Sbjct: 131 EVDAARIIRQVLS---GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFE 186
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAV 319
+ M + GT Y+APEVL G Y+ +CDV+S G+ L+ + P+ + D+ V
Sbjct: 187 ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 245
Query: 320 VRQNLRPEIP--RCCPSSLANIMRK 342
+ E+P + S +++RK
Sbjct: 246 EKGKYTFELPQWKKVSESAKDLIRK 270
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 128/309 (41%), Gaps = 55/309 (17%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVYRGT-------YDNQEVAVKLLDWGEDGMATTAETAALR 129
I + ++ + +G +G V+ D VAVK L D R
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA---------R 59
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
F +E + L H ++ KF G V L + EY+
Sbjct: 60 KDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM--------------------VFEYMKH 99
Query: 190 GNLKQYLIR-----------NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
G+L ++L N +L ++ +A ++ G+ YL S+ VHRD+ T N
Sbjct: 100 GDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNC 159
Query: 239 LLDSQRTLKIADFGVAR-VEAQNPRDMTGETGT-LGYMAPEVLQGKPYNRRCDVYSFGIC 296
L+ +KI DFG++R V + + + G T + +M PE + + + DV+S G+
Sbjct: 160 LVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
Query: 297 LWEIYCC-DMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
LWEI+ P+ LS +V + + + + PR CP + +M CW ++ P M
Sbjct: 220 LWEIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPQEVYELMLGCW----QREPHMR 274
Query: 356 EVVKMLEAI 364
+ +K + +
Sbjct: 275 KNIKGIHTL 283
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 52/289 (17%)
Query: 79 DLSKLDMRNLIAQ-GTYGSVYRGTYDNQEV--AVKLLDWGEDGMATTAETAALRSSFQQE 135
DL+ D +I + G +G VY+ V A K++D T +E + E
Sbjct: 7 DLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVID-------TKSEEEL--EDYMVE 57
Query: 136 VAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQY 195
+ + DHPN+ K + A +NL I E+ GG +
Sbjct: 58 IDILASCDHPNIVKLLDAFYYENNLWI--------------------LIEFCAGGAVDAV 97
Query: 196 LIRNRR--KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
++ R + +++V + LD L+YLH KI+HRD+K N+L +K+ADFGV
Sbjct: 98 MLELERPLTESQIQVVCKQTLD---ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGV 154
Query: 254 ARVEAQNPRDMTGE----TGTLGYMAPEVL-----QGKPYNRRCDVYSFGICLWEIYCCD 304
+ A+N R GT +MAPEV+ + +PY+ + DV+S GI L E+ +
Sbjct: 155 S---AKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 211
Query: 305 MPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEKR 351
P+ +L+ V + + P + P S+ + ++KC + N + R
Sbjct: 212 PPHHELNPMRVLLKIAKSE-PPTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 37/228 (16%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKL----LDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
+ +GTYG VY+ D+Q V L LD ++G+ +TA +E+++ ++L H
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTA---------IREISLLKELHH 78
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
PN+ + L + + D LK+ L N+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKD---------------------LKKVLDENKTGLQ 117
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+I I L L RG+++ H +I+HRD+K +N+L++S LK+ADFG+AR R
Sbjct: 118 DSQIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176
Query: 265 TGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
T E TL Y AP+VL G K Y+ D++S G E+ +P ++
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 95/177 (53%), Gaps = 8/177 (4%)
Query: 185 EYLPGGNLKQYLI-RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
EY PGG L Y+I ++R + ++V + + ++Y+HS+ HRD+K EN+L D
Sbjct: 88 EYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAYVHSQGYAHRDLKPENLLFDEY 144
Query: 244 RTLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIY 301
LK+ DFG+ A+ + + G+L Y APE++QGK Y DV+S GI L+ +
Sbjct: 145 HKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM 204
Query: 302 CCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
C +P+ D + + ++R + ++P+ S ++++ + +KR M ++
Sbjct: 205 CGFLPFDDDNVMALYKKIMRG--KYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLL 259
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 108/228 (47%), Gaps = 37/228 (16%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKL----LDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
+ +GTYG VY+ D+Q V L LD ++G+ +TA +E+++ ++L H
Sbjct: 29 VGEGTYGVVYKAK-DSQGRIVALKRIRLDAEDEGIPSTA---------IREISLLKELHH 78
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
PN+ + L + + D LK+ L N+
Sbjct: 79 PNIVSLIDVIHSERCLTLVFEFMEKD---------------------LKKVLDENKTGLQ 117
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+I I L L RG+++ H +I+HRD+K +N+L++S LK+ADFG+AR R
Sbjct: 118 DSQIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY 176
Query: 265 TGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
T E TL Y AP+VL G K Y+ D++S G E+ +P ++
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 108/226 (47%), Gaps = 39/226 (17%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ G YG V + E A+K++ + + TT+ + AL EVAV ++LDHPN
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIK--KSSVTTTSNSGALLD----EVAVLKQLDHPN 82
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNL-KQYLIRNRRKKLA 205
+ K N + E GG L + ++R + ++
Sbjct: 83 IMKLYEFFEDKRNYYL--------------------VMEVYRGGELFDEIILRQKFSEVD 122
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGV-ARVEAQNP 261
++++ L G +YLH IVHRD+K EN+LL+S+ +KI DFG+ A E
Sbjct: 123 AAVIMKQVLS---GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGG- 178
Query: 262 RDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
M GT Y+APEVL+ K Y+ +CDV+S G+ L+ + C P+
Sbjct: 179 -KMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
+Y+ GG L L +++R + A ++ L YLHSK I++RD+K EN+LLD
Sbjct: 86 DYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNG 143
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+KI DFG A+ P GT Y+APEV+ KPYN+ D +SFGI ++E+
Sbjct: 144 HIKITDFGFAKYV---PDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 305 MPYPDLSFADVSSAVVRQNLR 325
P+ D + ++ LR
Sbjct: 201 TPFYDSNTMKTYEKILNAELR 221
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 47/297 (15%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS- 130
P E WEI + G +G VY+ N+E G A ET +
Sbjct: 9 PNEVWEI-------VGELGDGAFGKVYKAK--NKET-------GALAAAKVIETKSEEEL 52
Query: 131 -SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
+ E+ + DHP + K +GA L I E+ PG
Sbjct: 53 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI--------------------MIEFCPG 92
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
G + ++ R +I + + + L++LHSK+I+HRD+K N+L+ + +++A
Sbjct: 93 GAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 151
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEV-----LQGKPYNRRCDVYSFGICLWEIYCCD 304
DFGV+ + + GT +MAPEV ++ PY+ + D++S GI L E+ +
Sbjct: 152 DFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
Query: 305 MPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P+ +L+ V + + + P + P + ++ D N E RP ++++
Sbjct: 212 PPHHELNPMRVLLKIAKSD-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 267
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 127/297 (42%), Gaps = 47/297 (15%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS- 130
P E WEI + G +G VY+ N+E G A ET +
Sbjct: 17 PNEVWEI-------VGELGDGAFGKVYKAK--NKET-------GALAAAKVIETKSEEEL 60
Query: 131 -SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
+ E+ + DHP + K +GA L I E+ PG
Sbjct: 61 EDYIVEIEILATCDHPYIVKLLGAYYHDGKLWI--------------------MIEFCPG 100
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
G + ++ R +I + + + L++LHSK+I+HRD+K N+L+ + +++A
Sbjct: 101 GAVDAIMLELDRGLTEPQIQV-VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA 159
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEV-----LQGKPYNRRCDVYSFGICLWEIYCCD 304
DFGV+ + + GT +MAPEV ++ PY+ + D++S GI L E+ +
Sbjct: 160 DFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
Query: 305 MPYPDLSFADVSSAVVRQNLRPEI--PRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P+ +L+ V + + + P + P + ++ D N E RP ++++
Sbjct: 220 PPHHELNPMRVLLKIAKSD-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 124/273 (45%), Gaps = 30/273 (10%)
Query: 89 IAQGTYGS--VYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G++G + + T D ++ +K ++ + ++ R ++EVAV + HPN
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEIN-------ISRMSSKEREESRREVAVLANMKHPN 84
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + +L I +Y GG+L + + +
Sbjct: 85 IVQYRESFEENGSLYI--------------------VMDYCEGGDLFKRINAQKGVLFQE 124
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
++ + + L ++H +KI+HRD+K++N+ L T+++ DFG+ARV
Sbjct: 125 DQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARA 184
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP 326
GT Y++PE+ + KPYN + D+++ G L+E+ + S ++ ++ + P
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSF-P 243
Query: 327 EIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ L +++ + + N RP + +++
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 34/256 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDN--QEVAVKLLDWGEDGMATTAETAALRS 130
K+E +I S +R L G YG V N E A+K++ + ++
Sbjct: 29 KKEGKIGESYFKVRKL-GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIE 87
Query: 131 SFQQEV----AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
F +E+ ++ + LDHPN+ K + + E+
Sbjct: 88 KFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVT--------------------EF 127
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
GG L + +I R K + + G+ YLH IVHRD+K EN+LL+++ +L
Sbjct: 128 YEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL 185
Query: 247 ---KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
KI DFG++ +++ + + GT Y+APEVL+ K YN +CDV+S G+ ++ + C
Sbjct: 186 LNIKIVDFGLSSFFSKDYK-LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCG 243
Query: 304 DMPYPDLSFADVSSAV 319
P+ + D+ V
Sbjct: 244 YPPFGGQNDQDIIKKV 259
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 99/177 (55%), Gaps = 15/177 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ R++KL + + ++S L+YLH + I++RD+K +N+LLDS+
Sbjct: 133 EYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 190
Query: 245 TLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ D+G+ + E P D T GT Y+APE+L+G+ Y D ++ G+ ++E+
Sbjct: 191 HIKLTDYGMCK-EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 249
Query: 304 DMPY--------PDLSFAD-VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ PD + D + ++ + +R IPR A++++ + + ++R
Sbjct: 250 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 304
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVY-----RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
D S+ ++ ++ QG++G V+ G+ Q A+K+L AT +R+ +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-----KATLKVRDRVRTKME 76
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+++ V +++HP + K A L + ++L GG+L
Sbjct: 77 RDILV--EVNHPFIVKLHYAFQTEGKLYL--------------------ILDFLRGGDL- 113
Query: 194 QYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG 252
R ++ + + ++ L +L+ L +LHS I++RD+K EN+LLD + +K+ DFG
Sbjct: 114 --FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 253 VARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSF 312
+++ + + GT+ YMAPEV+ + + + D +SFG+ ++E+ +P+
Sbjct: 172 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+ + +++ L +P+ +++R + N R
Sbjct: 232 KETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVY-----RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
D S+ ++ ++ QG++G V+ G+ Q A+K+L AT +R+ +
Sbjct: 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-----KATLKVRDRVRTKME 76
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+++ V +++HP + K A L + ++L GG+L
Sbjct: 77 RDILV--EVNHPFIVKLHYAFQTEGKLYL--------------------ILDFLRGGDL- 113
Query: 194 QYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG 252
R ++ + + ++ L +L+ L +LHS I++RD+K EN+LLD + +K+ DFG
Sbjct: 114 --FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 253 VARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSF 312
+++ + + GT+ YMAPEV+ + + + D +SFG+ ++E+ +P+
Sbjct: 172 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+ + +++ L +P+ +++R + N R
Sbjct: 232 KETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 268
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 38/279 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVY-----RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQ 133
D S+ ++ ++ QG++G V+ G+ Q A+K+L AT +R+ +
Sbjct: 23 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLK-----KATLKVRDRVRTKME 77
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
+++ V +++HP + K A L + ++L GG+L
Sbjct: 78 RDILV--EVNHPFIVKLHYAFQTEGKLYL--------------------ILDFLRGGDL- 114
Query: 194 QYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG 252
R ++ + + ++ L +L+ L +LHS I++RD+K EN+LLD + +K+ DFG
Sbjct: 115 --FTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 253 VARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSF 312
+++ + + GT+ YMAPEV+ + + + D +SFG+ ++E+ +P+
Sbjct: 173 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 232
Query: 313 ADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+ + +++ L +P+ +++R + N R
Sbjct: 233 KETMTMILKAKL--GMPQFLSPEAQSLLRMLFKRNPANR 269
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 39/265 (14%)
Query: 86 RNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD 143
+ ++ +G++G V + QE AVK++ + T E S +EV + ++LD
Sbjct: 31 QRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKE------SLLREVQLLKQLD 84
Query: 144 HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNRRK 202
HPN+ K + E GG L +I R R
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVG--------------------EVYTGGELFDEIISRKRFS 124
Query: 203 KLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQ 259
++ +I+ L G++Y H KIVHRD+K EN+LL+S+ ++I DFG++ +
Sbjct: 125 EVDAARIIRQVLS---GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFE 180
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAV 319
+ + GT Y+APEVL G Y+ +CDV+S G+ L+ + P+ + D+ V
Sbjct: 181 ASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKV 239
Query: 320 VRQNLRPEIP--RCCPSSLANIMRK 342
+ E+P + S +++RK
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRK 264
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 99/177 (55%), Gaps = 15/177 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ R++KL + + ++S L+YLH + I++RD+K +N+LLDS+
Sbjct: 86 EYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 143
Query: 245 TLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ D+G+ + E P D T GT Y+APE+L+G+ Y D ++ G+ ++E+
Sbjct: 144 HIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 202
Query: 304 DMPY--------PDLSFAD-VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ PD + D + ++ + +R IPR A++++ + + ++R
Sbjct: 203 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 257
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 99/177 (55%), Gaps = 15/177 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ R++KL + + ++S L+YLH + I++RD+K +N+LLDS+
Sbjct: 90 EYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 147
Query: 245 TLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ D+G+ + E P D T GT Y+APE+L+G+ Y D ++ G+ ++E+
Sbjct: 148 HIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 206
Query: 304 DMPY--------PDLSFAD-VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ PD + D + ++ + +R IPR A++++ + + ++R
Sbjct: 207 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKER 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 112/244 (45%), Gaps = 32/244 (13%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD--NQEVAVKLLDWGEDGMATTAETA 126
+++ K + + + + + + GT+G V G ++ +VAVK+L+ +
Sbjct: 4 AEKQKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILN------RQKIRSL 57
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+ ++E+ + HP++ K + PS V EY
Sbjct: 58 DVVGKIRREIQNLKLFRHPHIIKLYQV------ISTPSDIFMV--------------MEY 97
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
+ GG L Y+ +N R L K +L + G+ Y H +VHRD+K EN+LLD+
Sbjct: 98 VSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA 155
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDM 305
KIADFG++ + + + G+ Y APEV+ G+ Y D++S G+ L+ + C +
Sbjct: 156 KIADFGLSNMMSDG-EFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
Query: 306 PYPD 309
P+ D
Sbjct: 215 PFDD 218
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 99/177 (55%), Gaps = 15/177 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ R++KL + + ++S L+YLH + I++RD+K +N+LLDS+
Sbjct: 101 EYVNGGDLMFHM--QRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 158
Query: 245 TLKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ D+G+ + E P D T GT Y+APE+L+G+ Y D ++ G+ ++E+
Sbjct: 159 HIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAG 217
Query: 304 DMPY--------PDLSFAD-VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ PD + D + ++ + +R IPR A++++ + + ++R
Sbjct: 218 RSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSMSVKAASVLKSFLNKDPKER 272
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 107/233 (45%), Gaps = 30/233 (12%)
Query: 133 QQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNL 192
+ E+ V + LDHPN+ K N+ I +T GG L
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCE--------------------GGEL 107
Query: 193 KQYLI--RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS---QRTLK 247
+ ++ + R K L+ V +L + L+Y HS+ +VH+D+K EN+L +K
Sbjct: 108 LERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIK 167
Query: 248 IADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
I DFG+A + ++ T GT YMAPEV + + +CD++S G+ ++ + +P+
Sbjct: 168 IIDFGLAEL-FKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPF 225
Query: 308 PDLSFADVSSAVVRQ--NLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
S +V + N E P ++ +++++ + E+RP +V+
Sbjct: 226 TGTSLEEVQQKATYKEPNYAVECRPLTPQAV-DLLKQMLTKDPERRPSAAQVL 277
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G++G V T Q+VA+K+++ + ++ ++E++ + L HP+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K I SK + EY G L Y+++ R K++
Sbjct: 76 IIKLYDV--------IKSKDEII------------MVIEY-AGNELFDYIVQ--RDKMSE 112
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ + + + Y H KIVHRD+K EN+LLD +KIADFG++ + + +
Sbjct: 113 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 171
Query: 267 ETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYPDLS----FADVSSAVVR 321
G+ Y APEV+ GK Y DV+S G+ L+ + C +P+ D S F ++S+ V
Sbjct: 172 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 230
Query: 322 QNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+P+ A ++++ N R + E+++
Sbjct: 231 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 263
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G++G V T Q+VA+K+++ + ++ ++E++ + L HP+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K I SK + EY G L Y+++ R K++
Sbjct: 75 IIKLYDV--------IKSKDEII------------MVIEY-AGNELFDYIVQ--RDKMSE 111
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ + + + Y H KIVHRD+K EN+LLD +KIADFG++ + + +
Sbjct: 112 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 170
Query: 267 ETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYPDLS----FADVSSAVVR 321
G+ Y APEV+ GK Y DV+S G+ L+ + C +P+ D S F ++S+ V
Sbjct: 171 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 229
Query: 322 QNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+P+ A ++++ N R + E+++
Sbjct: 230 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 54 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 90
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 91 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 209 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 242
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 56 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 95
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L K++ +I+ ++++ + RGL+YL K +I+HRDVK N+L++S+
Sbjct: 96 MDGGSLDQVL--KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE 153
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YMAPE LQG Y+ + D++S G+ L E+
Sbjct: 154 IKLCDFGVS---GQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGR 210
Query: 305 MPYP 308
P P
Sbjct: 211 YPIP 214
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 107/220 (48%), Gaps = 43/220 (19%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKL--LDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
+ +GTYG VY+ T N+ VA+K L+ E+G+ TA +EV++ ++L H
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA---------IREVSLLKELQH 92
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
N+ + L + + A D LK+Y+ +N +
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAEND---------------------LKKYMDKN--PDV 129
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL---DSQRT--LKIADFGVARVEAQ 259
+++++ L G+++ HS++ +HRD+K +N+LL D+ T LKI DFG+AR
Sbjct: 130 SMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGI 189
Query: 260 NPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLW 298
R T E TL Y PE+L G + Y+ D++S C+W
Sbjct: 190 PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIA-CIW 228
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 54 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 90
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 91 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 209 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 242
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 59 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 95
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 96 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 153
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 154 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 213
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 214 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 247
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G++G V T Q+VA+K+++ + ++ ++E++ + L HP+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K I SK + EY G L Y+++ R K++
Sbjct: 70 IIKLYDV--------IKSKDEII------------MVIEY-AGNELFDYIVQ--RDKMSE 106
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ + + + Y H KIVHRD+K EN+LLD +KIADFG++ + + +
Sbjct: 107 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 165
Query: 267 ETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYPDLS----FADVSSAVVR 321
G+ Y APEV+ GK Y DV+S G+ L+ + C +P+ D S F ++S+ V
Sbjct: 166 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 224
Query: 322 QNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+P+ A ++++ N R + E+++
Sbjct: 225 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 257
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G++G V T Q+VA+K+++ + ++ ++E++ + L HP+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIIN------KKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ K I SK + EY G L Y+++ R K++
Sbjct: 66 IIKLYDV--------IKSKDEII------------MVIEY-AGNELFDYIVQ--RDKMSE 102
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ + + + Y H KIVHRD+K EN+LLD +KIADFG++ + + +
Sbjct: 103 QEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI-MTDGNFLKT 161
Query: 267 ETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYPDLS----FADVSSAVVR 321
G+ Y APEV+ GK Y DV+S G+ L+ + C +P+ D S F ++S+ V
Sbjct: 162 SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY- 220
Query: 322 QNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+P+ A ++++ N R + E+++
Sbjct: 221 -----TLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 253
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 4 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 57 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 93
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 94 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 151
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 152 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 211
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 212 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 245
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
+ GTY +VY+G V V L + D T TA +E+++ ++L H N+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI------REISLMKELKHENIV 66
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL----IRNRRKKL 204
+ + L + E++ +LK+Y+ + N + L
Sbjct: 67 RLYDVIHTENKLTL--------------------VFEFM-DNDLKKYMDSRTVGNTPRGL 105
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
L +V L +GL++ H KI+HRD+K +N+L++ + LK+ DFG+AR
Sbjct: 106 ELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF 165
Query: 265 TGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYP 308
+ E TL Y AP+VL G + Y+ D++S G L E+ +P
Sbjct: 166 SSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFP 210
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 54 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 90
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 91 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 209 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 242
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 54 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 90
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 91 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 149 FGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 209 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 242
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 116/276 (42%), Gaps = 44/276 (15%)
Query: 77 EIDLSKLDMRNLIAQGTYGSVY------RGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
++ ++ D L+ +GT+G V G Y ++ K + +D +A T
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTV------- 53
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
E V Q HP +T LK +T EY GG
Sbjct: 54 ---TESRVLQNTRHPFLTA----------LKYAFQTHD----------RLCFVMEYANGG 90
Query: 191 NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIAD 250
L +L R R + ++ L YLHS+ +V+RD+K EN++LD +KI D
Sbjct: 91 ELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITD 148
Query: 251 FGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDL 310
FG+ + + M GT Y+APEVL+ Y R D + G+ ++E+ C +P+ +
Sbjct: 149 FGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208
Query: 311 SFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+ ++ + +R PR S LA +++K
Sbjct: 209 DHERLFELILMEEIR--FPRTLSPEAKSLLAGLLKK 242
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 130/297 (43%), Gaps = 35/297 (11%)
Query: 80 LSKLDMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
L+ + I +G + VYR D VA+K + D M A R+ +E+
Sbjct: 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIF-DLMDAKA-----RADCIKEID 84
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ ++L+HPNV K+ + + + L I + A G+L + +
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELAD--------------------AGDLSRMIK 124
Query: 198 RNRRKKLAL--KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
+++K + + V + + L L ++HS++++HRD+K N+ + + +K+ D G+ R
Sbjct: 125 HFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY--PDLSFA 313
+ GT YM+PE + YN + D++S G L+E+ P+ ++
Sbjct: 185 FFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY 244
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG---EVVKMLEAIDTS 367
+ + + + P L ++ C + + EKRP++ +V K + A S
Sbjct: 245 SLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 34/271 (12%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G +G+VY R + VA+K+L + E + ++E+ + L HPN
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVL------FKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ + N EY P G L + L +
Sbjct: 85 ILRLY--------------------NYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDE 122
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+ + +L+ L Y H KK++HRD+K EN+LL + LKIADFG + V A + R T
Sbjct: 123 QRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTM 181
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP 326
GTL Y+ PE+++G+ +N + D++ G+ +E+ + P+ S + +V+ +L+
Sbjct: 182 -CGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLK- 239
Query: 327 EIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P P+ +++ K N +R + +V
Sbjct: 240 -FPASVPTGAQDLISKLLRHNPSERLPLAQV 269
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 99 RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTS 158
R D+++VAVK+L A A + F++E L+HP + A T
Sbjct: 32 RDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPAIV----AVYDTG 81
Query: 159 NLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSR 218
+ P+ EY+ G L+ I + + K I++ D +
Sbjct: 82 EAETPAGP------------LPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQ 127
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG---YMA 275
L++ H I+HRDVK N+++ + +K+ DFG+AR A + +T +G Y++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CP 333
PE +G + R DVYS G L+E+ + P+ S V+ VR++ P R
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 334 SSLANIMRKCWDANAEKR 351
+ L ++ K N E R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 185 EYLPGGNLKQYLIRNR-----RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML 239
+Y+ GG L +L R R R + A +++ L YLHS IV+RD+K EN+L
Sbjct: 119 DYINGGELFYHLQRERCFLEPRARF-------YAAEIASALGYLHSLNIVYRDLKPENIL 171
Query: 240 LDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE 299
LDSQ + + DFG+ + ++ + GT Y+APEVL +PY+R D + G L+E
Sbjct: 172 LDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231
Query: 300 IYCCDMPYPDLSFADVSSAVVRQ--NLRPEIPRCCPSSLANIMRK 342
+ P+ + A++ ++ + L+P I L +++K
Sbjct: 232 MLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQK 276
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDW--GEDGM--ATTAETAALRSSFQQEVAVWQKL 142
I G YG+VY R + VA+K + GE+G+ +T E A LR +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR--------LEAF 63
Query: 143 DHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN 199
+HPNV + + S +K+ VD + L+ YL +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-------------------LRTYLDKA 104
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
L + + L RGL +LH+ IVHRD+K EN+L+ S T+K+ADFG+AR+ +
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+ TL Y APEVL Y D++S G E++
Sbjct: 165 Q-MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETA 126
++ PK ++ ID D+ + +G +G+VY R + +A+K+L + E
Sbjct: 5 AEMPKRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKE 56
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+ ++E+ + L HPN+ + N E+
Sbjct: 57 GVEHQLRREIEIQSHLRHPNILRMY--------------------NYFHDRKRIYLMLEF 96
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
P G L + L ++ R + +L+ L Y H +K++HRD+K EN+L+ + L
Sbjct: 97 APRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 154
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMP 306
KIADFG + V A + R GTL Y+ PE+++GK ++ + D++ G+ +E P
Sbjct: 155 KIADFGWS-VHAPSLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
Query: 307 YPDLSFADVSSAVVRQNLR 325
+ S + +V +L+
Sbjct: 213 FDSPSHTETHRRIVNVDLK 231
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETA 126
++ PK ++ ID D+ + +G +G+VY R + +A+K+L + E
Sbjct: 4 AEMPKRKFTID--DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKE 55
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+ ++E+ + L HPN+ + N E+
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMY--------------------NYFHDRKRIYLMLEF 95
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
P G L + L ++ R + +L+ L Y H +K++HRD+K EN+L+ + L
Sbjct: 96 APRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 153
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMP 306
KIADFG + V A + R GTL Y+ PE+++GK ++ + D++ G+ +E P
Sbjct: 154 KIADFGWS-VHAPSLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 307 YPDLSFADVSSAVVRQNLR 325
+ S + +V +L+
Sbjct: 212 FDSPSHTETHRRIVNVDLK 230
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 34/259 (13%)
Query: 69 SQRPKEEWEIDLSKLDMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETA 126
++ PK ++ ID D+ + +G +G+VY R + +A+K+L + E
Sbjct: 4 AEMPKRKFTID--DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVL------FKSQLEKE 55
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+ ++E+ + L HPN+ + N E+
Sbjct: 56 GVEHQLRREIEIQSHLRHPNILRMY--------------------NYFHDRKRIYLMLEF 95
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
P G L + L ++ R + +L+ L Y H +K++HRD+K EN+L+ + L
Sbjct: 96 APRGELYKELQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGEL 153
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMP 306
KIADFG + V A + R GTL Y+ PE+++GK ++ + D++ G+ +E P
Sbjct: 154 KIADFGWS-VHAPSLRRRXM-CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 307 YPDLSFADVSSAVVRQNLR 325
+ S + +V +L+
Sbjct: 212 FDSPSHTETHRRIVNVDLK 230
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 112/258 (43%), Gaps = 29/258 (11%)
Query: 99 RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTS 158
R D+++VAVK+L A A + F++E L+HP + A T
Sbjct: 32 RDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPAIV----AVYDTG 81
Query: 159 NLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSR 218
+ P+ EY+ G L+ I + + K I++ D +
Sbjct: 82 EAETPAGP------------LPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQ 127
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG---YMA 275
L++ H I+HRDVK N+++ + +K+ DFG+AR A + +T +G Y++
Sbjct: 128 ALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CP 333
PE +G + R DVYS G L+E+ + P+ S V+ VR++ P R
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLS 247
Query: 334 SSLANIMRKCWDANAEKR 351
+ L ++ K N E R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ + R K + A +++ GL +L SK I++RD+K +N++LDS+
Sbjct: 422 EYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 479
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+KIADFG+ + + GT Y+APE++ +PY + D ++FG+ L+E+
Sbjct: 480 HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
Query: 305 MPYPDLSFADVSSAVVRQNL 324
P+ ++ +++ N+
Sbjct: 540 APFEGEDEDELFQSIMEHNV 559
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDW--GEDGM--ATTAETAALRSSFQQEVAVWQKL 142
I G YG+VY R + VA+K + GE+G+ +T E A LR +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR--------LEAF 63
Query: 143 DHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN 199
+HPNV + + S +K+ VD + L+ YL +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-------------------LRTYLDKA 104
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
L + + L RGL +LH+ IVHRD+K EN+L+ S T+K+ADFG+AR+ +
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+ TL Y APEVL Y D++S G E++
Sbjct: 165 Q-MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDW--GEDGM--ATTAETAALRSSFQQEVAVWQKL 142
I G YG+VY R + VA+K + GE+G+ +T E A LR +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRR--------LEAF 63
Query: 143 DHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN 199
+HPNV + + S +K+ VD + L+ YL +
Sbjct: 64 EHPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-------------------LRTYLDKA 104
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
L + + L RGL +LH+ IVHRD+K EN+L+ S T+K+ADFG+AR+ +
Sbjct: 105 PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY 164
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+ TL Y APEVL Y D++S G E++
Sbjct: 165 Q-MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 111/258 (43%), Gaps = 29/258 (11%)
Query: 99 RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTS 158
R D+++VAVK+L A A + F++E L+HP + A T
Sbjct: 32 RDLRDHRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPAIV----AVYDTG 81
Query: 159 NLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSR 218
+ P+ EY+ G L+ I + + K I++ D +
Sbjct: 82 EAETPAGP------------LPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQ 127
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG---YMA 275
L++ H I+HRDVK N+L+ + +K+ DFG+AR A + + +G Y++
Sbjct: 128 ALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLS 187
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CP 333
PE +G + R DVYS G L+E+ + P+ S V+ VR++ P R
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLS 247
Query: 334 SSLANIMRKCWDANAEKR 351
+ L ++ K N E R
Sbjct: 248 ADLDAVVLKALAKNPENR 265
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ + R K + A +++ GL +L SK I++RD+K +N++LDS+
Sbjct: 101 EYVNGGDLMYHIQQVGRFKEPHAVF--YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEG 158
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+KIADFG+ + + GT Y+APE++ +PY + D ++FG+ L+E+
Sbjct: 159 HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
Query: 305 MPYPDLSFADVSSAVVRQNL 324
P+ ++ +++ N+
Sbjct: 219 APFEGEDEDELFQSIMEHNV 238
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
S + E+AV K+ HPN+ +L + + S GG
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS--------------------GG 101
Query: 191 NLKQYLIRN--RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML---LDSQRT 245
L ++ ++ A +++ Q+ LD + YLH IVHRD+K EN+L LD
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQV-LD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+ I+DFG++++E ++ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKMEDPGSV-LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 216
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
P+ D + A + +++ + P S + +R + + EKR
Sbjct: 217 PFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 73 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 112
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + R + +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 113 MDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 171 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
Query: 305 MPYP 308
P P
Sbjct: 228 YPIP 231
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 108 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 147
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + R + +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 148 MDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 205
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 206 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 262
Query: 305 MPYP 308
P P
Sbjct: 263 YPIP 266
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG++ +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +K+ADFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 90/181 (49%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG++ +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +K+ADFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 102/238 (42%), Gaps = 40/238 (16%)
Query: 88 LIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ QG +G V R D++ A+K + E+ ++T EV + L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----------SEVMLLASLNHQ 62
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
V ++ A + N P EY G L LI +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVK-------KKSTLFIQMEYCENGTLYD-LIHSENLNQQ 114
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA----------R 255
+L + LSY+HS+ I+HRD+K N+ +D R +KI DFG+A +
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 256 VEAQN----PRDMTGETGTLGYMAPEVLQGK-PYNRRCDVYSFGICLWEIYCCDMPYP 308
+++QN ++T GT Y+A EVL G YN + D+YS GI +E M YP
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIYP 227
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 305 MPYP 308
P P
Sbjct: 201 YPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 305 MPYP 308
P P
Sbjct: 201 YPIP 204
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 305 MPYP 308
P P
Sbjct: 201 YPIP 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 305 MPYP 308
P P
Sbjct: 201 YPIP 204
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 46 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 85
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 86 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 143
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 144 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 305 MPYP 308
P P
Sbjct: 201 YPIP 204
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
S + E+AV K+ HPN+ +L + + S GG
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS--------------------GG 101
Query: 191 NLKQYLIRN--RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML---LDSQRT 245
L ++ ++ A +++ Q+ LD + YLH IVHRD+K EN+L LD
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQV-LD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 246 LKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+ I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
P+ D + A + +++ + P S + +R + + EKR
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 110/253 (43%), Gaps = 29/253 (11%)
Query: 104 NQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIP 163
+++VAVK+L A A + F++E L+HP + A T + P
Sbjct: 37 HRDVAVKVL------RADLARDPSFYLRFRREAQNAAALNHPAIV----AVYATGEAETP 86
Query: 164 SKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYL 223
+ EY+ G L+ I + + K I++ D + L++
Sbjct: 87 AGP------------LPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFS 132
Query: 224 HSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVLQ 280
H I+HRDVK N+++ + +K+ DFG+AR A + +T +G Y++PE +
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQAR 192
Query: 281 GKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLAN 338
G + R DVYS G L+E+ + P+ S V+ VR++ P R + L
Sbjct: 193 GDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDA 252
Query: 339 IMRKCWDANAEKR 351
++ K N E R
Sbjct: 253 VVLKALAKNPENR 265
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
S + E+AV K+ HPN+ +L + + S GG
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS--------------------GG 101
Query: 191 NLKQYLIRN--RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML---LDSQRT 245
L ++ ++ A +++ Q+ LD + YLH IVHRD+K EN+L LD
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQV-LD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 246 LKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+ I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
P+ D + A + +++ + P S + +R + + EKR
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
S + E+AV K+ HPN+ +L + + S GG
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVS--------------------GG 101
Query: 191 NLKQYLIRN--RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENML---LDSQRT 245
L ++ ++ A +++ Q+ LD + YLH IVHRD+K EN+L LD
Sbjct: 102 ELFDRIVEKGFYTERDASRLIFQV-LD---AVKYLHDLGIVHRDLKPENLLYYSLDEDSK 157
Query: 246 LKIADFGVARVEAQNPRD-MTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+ I+DFG++++E +P ++ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 158 IMISDFGLSKME--DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
P+ D + A + +++ + P S + +R + + EKR
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 264
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ G L+ I + + K I++ D + L++ H I+HRDVK N+++ +
Sbjct: 96 EYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 153
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+K+ DFG+AR A + +T +G Y++PE +G + R DVYS G L+E+
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213
Query: 302 CCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
+ P+ S V+ VR++ P R + L ++ K N E R
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 265
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 7/172 (4%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ G L+ I + + K I++ D + L++ H I+HRDVK N+++ +
Sbjct: 113 EYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 170
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLG---YMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+K+ DFG+AR A + +T +G Y++PE +G + R DVYS G L+E+
Sbjct: 171 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 230
Query: 302 CCDMPYPDLSFADVSSAVVRQNLRPEIPRC--CPSSLANIMRKCWDANAEKR 351
+ P+ S V+ VR++ P R + L ++ K N E R
Sbjct: 231 TGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENR 282
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 89/181 (49%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +K+ADFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 87/167 (52%), Gaps = 4/167 (2%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG+L ++ + K + A ++S GL +LH + I++RD+K +N++LDS+
Sbjct: 100 EYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEG 157
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+KIADFG+ + + GT Y+APE++ +PY + D +++G+ L+E+
Sbjct: 158 HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
Query: 305 MPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ ++ +++ N+ P+ +I + + KR
Sbjct: 218 PPFDGEDEDELFQSIMEHNV--SYPKSLSKEAVSICKGLMTKHPAKR 262
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
I +GTYG VY+ + E + + E + S+ +E+++ ++L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGET------FALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
K L + + D + GG L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGG-------------LESVT 101
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET 268
L L G++Y H ++++HRD+K +N+L++ + LKIADFG+AR R T E
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 269 GTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
TL Y AP+VL G K Y+ D++S G E+ +P +S AD + R
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYM 274
+L+ GL +LHS I++RD+K EN+LLD + +K+ DFG+++ + + GT+ YM
Sbjct: 138 ELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYM 197
Query: 275 APEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS 334
APEV+ + ++ D +S+G+ ++E+ +P+ + + +++ L +P+ +
Sbjct: 198 APEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKL--GMPQFLST 255
Query: 335 SLANIMRKCWDANAEKR----PEMGEVVK 359
+++R + N R P+ E +K
Sbjct: 256 EAQSLLRALFKRNPANRLGSGPDGAEEIK 284
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
I +GTYG VY+ + E + + E + S+ +E+++ ++L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGET------FALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
K L + + D + GG L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGG-------------LESVT 101
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET 268
L L G++Y H ++++HRD+K +N+L++ + LKIADFG+AR R T E
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 269 GTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
TL Y AP+VL G K Y+ D++S G E+ +P +S AD + R
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 29/234 (12%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVT 148
I +GTYG VY+ + E + + E + S+ +E+++ ++L H N+
Sbjct: 10 IGEGTYGVVYKAQNNYGET------FALKKIRLEKEDEGIPSTTIREISILKELKHSNIV 63
Query: 149 KFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKI 208
K L + + D + GG L
Sbjct: 64 KLYDVIHTKKRLVLVFEHLDQD---------LKKLLDVCEGG-------------LESVT 101
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET 268
L L G++Y H ++++HRD+K +N+L++ + LKIADFG+AR R T E
Sbjct: 102 AKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 269 GTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
TL Y AP+VL G K Y+ D++S G E+ +P +S AD + R
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENMLLDSQ 243
EY GG L +L R R + ++ L YLHS+K +V+RD+K EN++LD
Sbjct: 231 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 288
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++E+ C
Sbjct: 289 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 348
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+P+ + + ++ + +R PR S L+ +++K
Sbjct: 349 RLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKK 389
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 9/163 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENMLLDSQ 243
EY GG L +L R R + ++ L YLHS+K +V+RD+K EN++LD
Sbjct: 228 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 285
Query: 244 RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++E+ C
Sbjct: 286 GHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 345
Query: 304 DMPYPDLSFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
+P+ + + ++ + +R PR S L+ +++K
Sbjct: 346 RLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKK 386
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 33/232 (14%)
Query: 84 DMRNLIAQGTYGSVYRGTYDN--QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
+M+ + G +G V R + + ++VA+K + R + E+ + +K
Sbjct: 17 EMKERLGTGGFGYVLRWIHQDTGEQVAIK--------QCRQELSPKNRERWCLEIQIMKK 68
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L+HPNV S ++P + N EY GG+L++YL N+
Sbjct: 69 LNHPNVV---------SAREVPDGLQKLAPNDLPLLAM-----EYCEGGDLRKYL--NQF 112
Query: 202 KK---LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD--SQRTL-KIADFGVAR 255
+ L + L D+S L YLH +I+HRD+K EN++L QR + KI D G A+
Sbjct: 113 ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
E T GTL Y+APE+L+ K Y D +SFG +E P+
Sbjct: 173 -ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 104/240 (43%), Gaps = 44/240 (18%)
Query: 88 LIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ QG +G V R D++ A+K + E+ ++T EV + L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----------SEVMLLASLNHQ 62
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY--LPGGNLKQYLIRNRRKK 203
V ++ A + N P Y + NL Q R+ +
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ--RDEYWR 120
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA--------- 254
L +I+ LSY+HS+ I+HRD+K N+ +D R +KI DFG+A
Sbjct: 121 LFRQIL--------EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 255 -RVEAQN----PRDMTGETGTLGYMAPEVLQGK-PYNRRCDVYSFGICLWEIYCCDMPYP 308
++++QN ++T GT Y+A EVL G YN + D+YS GI +E M YP
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE-----MIYP 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 33/232 (14%)
Query: 84 DMRNLIAQGTYGSVYRGTYDN--QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
+M+ + G +G V R + + ++VA+K + R + E+ + +K
Sbjct: 18 EMKERLGTGGFGYVLRWIHQDTGEQVAIK--------QCRQELSPKNRERWCLEIQIMKK 69
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L+HPNV S ++P + N EY GG+L++YL N+
Sbjct: 70 LNHPNVV---------SAREVPDGLQKLAPNDLPLLAM-----EYCEGGDLRKYL--NQF 113
Query: 202 KK---LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD--SQRTL-KIADFGVAR 255
+ L + L D+S L YLH +I+HRD+K EN++L QR + KI D G A+
Sbjct: 114 ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 173
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
E T GTL Y+APE+L+ K Y D +SFG +E P+
Sbjct: 174 -ELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 99/221 (44%), Gaps = 32/221 (14%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD--- 143
I G YG+VY R + VA+K + L S +EVA+ ++L+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPN----GGGGGGGLPISTVREVALLRRLEAFE 72
Query: 144 HPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
HPNV + + S +K+ VD + L+ YL +
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQD-------------------LRTYLDKAP 113
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN 260
L + + L RGL +LH+ IVHRD+K EN+L+ S T+K+ADFG+AR+ +
Sbjct: 114 PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ 173
Query: 261 PRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+T TL Y APEVL Y D++S G E++
Sbjct: 174 -MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 89 IAQGTYGSVYRG---TYDNQEVAVKLL--DWGEDGM--ATTAETAALRSSFQQEVAVWQK 141
I +G YG V++ + VA+K + GE+GM +T E A LR +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--------LET 70
Query: 142 LDHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
+HPNV + S K+ VD + L YL +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-------------------LTTYLDK 111
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
+ + + + L RGL +LHS ++VHRD+K +N+L+ S +K+ADFG+AR+ +
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+T TL Y APEVL Y D++S G E++
Sbjct: 172 FQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 116/239 (48%), Gaps = 33/239 (13%)
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
A+R+ +E+ V + + P + F GA + I E+
Sbjct: 65 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI--------------------CMEH 104
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRT 245
+ GG+L Q L + ++ +I+ ++++ + +GL+YL K KI+HRDVK N+L++S+
Sbjct: 105 MDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 162
Query: 246 LKIADFGVARVEAQNPRDMTGE-TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFGV+ Q M GT YM+PE LQG Y+ + D++S G+ L E+
Sbjct: 163 IKLCDFGVS---GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
Query: 305 MPY----PDLSFADVSSAVVRQNLRPEIPRCCPS-SLANIMRKCWDANAEKRPEMGEVV 358
P ++ ++ +V + P++P S + + KC N +R ++ +++
Sbjct: 220 YPIGSGSGSMAIFELLDYIVNEP-PPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLM 277
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 89 IAQGTYGSVYRG---TYDNQEVAVKLL--DWGEDGM--ATTAETAALRSSFQQEVAVWQK 141
I +G YG V++ + VA+K + GE+GM +T E A LR +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--------LET 70
Query: 142 LDHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
+HPNV + S K+ VD + L YL +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-------------------LTTYLDK 111
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
+ + + + L RGL +LHS ++VHRD+K +N+L+ S +K+ADFG+AR+ +
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+T TL Y APEVL Y D++S G E++
Sbjct: 172 FQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 38/223 (17%)
Query: 89 IAQGTYGSVYRG---TYDNQEVAVKLL--DWGEDGM--ATTAETAALRSSFQQEVAVWQK 141
I +G YG V++ + VA+K + GE+GM +T E A LR +
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH--------LET 70
Query: 142 LDHPNVTKFV---GASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
+HPNV + S K+ VD + L YL +
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD-------------------LTTYLDK 111
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
+ + + + L RGL +LHS ++VHRD+K +N+L+ S +K+ADFG+AR+ +
Sbjct: 112 VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+T TL Y APEVL Y D++S G E++
Sbjct: 172 FQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 44/249 (17%)
Query: 77 EIDLSKL-------DMRNLIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAA 127
EIDLS L ++ L+ GTYG VY+G + Q A+K++D T
Sbjct: 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV----------TGD 62
Query: 128 LRSSFQQEVAVWQKLDHP-NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+QE+ + +K H N+ + GA + + + + V E+
Sbjct: 63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLV--------------MEF 108
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
G++ + + L + + + ++ RGLS+LH K++HRD+K +N+LL +
Sbjct: 109 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEV 168
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQ-----GKPYNRRCDVYSFGICLWEIY 301
K+ DFGV+ + GT +MAPEV+ Y+ + D++S GI E+
Sbjct: 169 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
Query: 302 -----CCDM 305
CDM
Sbjct: 229 EGAPPLCDM 237
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +K+ADFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIKVADFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 185 EYLPGGNLKQYLIRNR-----RKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENM 238
EY GG L +L R R R + ++ L YLHS+K +V+RD+K EN+
Sbjct: 90 EYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKNVVYRDLKLENL 142
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLW 298
+LD +KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++
Sbjct: 143 MLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 202
Query: 299 EIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
E+ C +P+ + + ++ + +R PR S L+ +++K
Sbjct: 203 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKK 248
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 185 EYLPGGNLKQYLIRNR-----RKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENM 238
EY GG L +L R R R + ++ L YLHS+K +V+RD+K EN+
Sbjct: 88 EYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKNVVYRDLKLENL 140
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLW 298
+LD +KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++
Sbjct: 141 MLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 200
Query: 299 EIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
E+ C +P+ + + ++ + +R PR S L+ +++K
Sbjct: 201 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKK 246
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 19/168 (11%)
Query: 185 EYLPGGNLKQYLIRNR-----RKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENM 238
EY GG L +L R R R + ++ L YLHS+K +V+RD+K EN+
Sbjct: 89 EYANGGELFFHLSRERVFSEDRARF-------YGAEIVSALDYLHSEKNVVYRDLKLENL 141
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLW 298
+LD +KI DFG+ + ++ M GT Y+APEVL+ Y R D + G+ ++
Sbjct: 142 MLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 201
Query: 299 EIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC----CPSSLANIMRK 342
E+ C +P+ + + ++ + +R PR S L+ +++K
Sbjct: 202 EMMCGRLPFYNQDHEKLFELILMEEIR--FPRTLGPEAKSLLSGLLKK 247
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 127/295 (43%), Gaps = 48/295 (16%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD--NQEVAVKLLDWGEDGMATTAETAALRS 130
K + + + + + + GT+G V G + +VAVK+L+ + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVG 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++E+ + HP++ K + P+ V EY+ GG
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV------ISTPTDFFMV--------------MEYVSGG 96
Query: 191 NLKQYLIRN-RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
L Y+ ++ R +++ + + Q L + Y H +VHRD+K EN+LLD+ KIA
Sbjct: 97 ELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 250 DFGVARV--EAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMP 306
DFG++ + + + RD G+ Y APEV+ G+ Y D++S G+ L+ + C +P
Sbjct: 154 DFGLSNMMSDGEFLRD---SCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLP 210
Query: 307 YPDLS----FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
+ D F + V IP S+A ++ + KR + ++
Sbjct: 211 FDDEHVPTLFKKIRGGVFY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 45/234 (19%)
Query: 85 MRNLIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKL 142
+R + +G++G V T+ Q+VA+K + + + + ++E++ + L
Sbjct: 13 IRETLGEGSFGKVKLATHYKTQQKVALKFIS------RQLLKKSDMHMRVEREISYLKLL 66
Query: 143 DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR- 201
HP++ K +++ + + A GG L Y++ +R
Sbjct: 67 RHPHIIKLYDVITTPTDIVMVIEYA---------------------GGELFDYIVEKKRM 105
Query: 202 -----KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
++ +I+ + Y H KIVHRD+K EN+LLD +KIADFG++ +
Sbjct: 106 TEDEGRRFFQQIIC--------AIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNI 157
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYPD 309
+ + G+ Y APEV+ GK Y DV+S GI L+ + +P+ D
Sbjct: 158 -MTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I QG G+VY QEVA++ ++ + + E+ V ++ +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---------QQQPKKELIINEILVMRENKNPN 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + + L + EYL GG+L + + +
Sbjct: 79 IVNYLDSYLVGDELWV--------------------VMEYLAGGSLTDVVTETCMDEGQI 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV-ARVEAQNPRDMT 265
V + L + L +LHS +++HRD+K++N+LL ++K+ DFG A++ + + T
Sbjct: 119 AAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 175
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV+ K Y + D++S GI E+ + PY + + + ++ N
Sbjct: 176 -MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGT 233
Query: 326 PEIPRCCPSSLANIMR----KCWDANAEKRPEMGEVVK 359
PE+ P L+ I R +C D + EKR E+++
Sbjct: 234 PELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 125/293 (42%), Gaps = 44/293 (15%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD--NQEVAVKLLDWGEDGMATTAETAALRS 130
K + + + + + + GT+G V G + +VAVK+L+ + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILN------RQKIRSLDVVG 56
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
++E+ + HP++ K + P+ V EY+ GG
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQV------ISTPTDFFMV--------------MEYVSGG 96
Query: 191 NLKQYLIRN-RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
L Y+ ++ R +++ + + Q L + Y H +VHRD+K EN+LLD+ KIA
Sbjct: 97 ELFDYICKHGRVEEMEARRLFQQILS---AVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPYP 308
DFG++ + + + G+ Y APEV+ G+ Y D++S G+ L+ + C +P+
Sbjct: 154 DFGLSNMMSDG-EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
Query: 309 DLS----FADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
D F + V IP S+A ++ + KR + ++
Sbjct: 213 DEHVPTLFKKIRGGVFY------IPEYLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 79 DLSKLDMRNLIAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D + D I G +G + R + VAVK ++ G AA+ + Q+E+
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG----------AAIDENVQREI 67
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
+ L HPN+ +F + ++L I EY GG L + +
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAI--------------------IMEYASGGELYERI 107
Query: 197 IR-NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGV 253
R + + Q L G+SY HS +I HRD+K EN LLD LKI DFG
Sbjct: 108 CNAGRFSEDEARFFFQ---QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGY 164
Query: 254 AR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
++ V P+ GT Y+APEVL + Y+ + DV+S G+ L+ + P+ D
Sbjct: 165 SKSSVLHSQPK---STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED 220
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 40/237 (16%)
Query: 79 DLSKLDMRNLIAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D + ++ I G +G + R N+ VAVK ++ GE + + ++E+
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK----------IDENVKREI 66
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
+ L HPN+ +F + ++L I EY GG L + +
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERI 106
Query: 197 IR-NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGV 253
R + + Q L G+SY H+ ++ HRD+K EN LLD LKIADFG
Sbjct: 107 CNAGRFSEDEARFFFQ---QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGY 163
Query: 254 ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
++ + + + GT Y+APEVL K Y+ + DV+S G+ L+ + P+ D
Sbjct: 164 SKASVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D M + + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEIXINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D M + + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D M + + ++E+ + +
Sbjct: 8 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEICINKM 59
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 60 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 99
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 100 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 155
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 156 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D M + + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D M + + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEIXINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
M E T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP+ + +
Sbjct: 237 VIEQLGTP-----CPAFMKKL 252
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 128/303 (42%), Gaps = 54/303 (17%)
Query: 86 RNLIAQGTYGSVYRGTY-DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
+N++ +G +G VY+G D VAVK L T FQ EV + H
Sbjct: 35 KNILGRGGFGKVYKGRLADGXLVAVKRL--------KEERTQGGELQFQTEVEMISMAVH 86
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR---R 201
N+ + G + P++ V Y+ G++ L R R +
Sbjct: 87 RNLLRLRGFCM------TPTERLLV--------------YPYMANGSVASCL-RERPESQ 125
Query: 202 KKLALKIVIQLALDLSRGLSYLHSK---KIVHRDVKTENMLLDSQRTLKIADFGVARV-E 257
L ++AL +RGL+YLH KI+HRDVK N+LLD + + DFG+A++ +
Sbjct: 126 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFA---D 314
++ G +G++APE L + + DV+ +G+ L E+ + A D
Sbjct: 186 YKDXHVXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 245
Query: 315 VS--------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKM 360
V A+V +L+ L + C ++ +RP+M EVV+M
Sbjct: 246 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 305
Query: 361 LEA 363
LE
Sbjct: 306 LEG 308
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 104/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ + +
Sbjct: 9 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEIXINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 121/277 (43%), Gaps = 41/277 (14%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I QG G+VY QEVA++ ++ + + E+ V ++ +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---------QQQPKKELIINEILVMRENKNPN 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + + L + EYL GG+L + + +
Sbjct: 79 IVNYLDSYLVGDELWV--------------------VMEYLAGGSLTDVVTETCMDEGQI 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
V + L + L +LHS +++HRD+K++N+LL ++K+ DFG +
Sbjct: 119 AAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSE 175
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP 326
GT +MAPEV+ K Y + D++S GI E+ + PY + + + ++ N P
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP 234
Query: 327 EIPRCCPSSLANIMR----KCWDANAEKRPEMGEVVK 359
E+ P L+ I R +C D + EKR E+++
Sbjct: 235 ELQN--PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 44/223 (19%)
Query: 87 NLIAQGTYGSVY--RGTYDNQEVAVKLLDWGE-----DGMATTAETAALRSSFQQEVAVW 139
+ + +G + +VY R NQ VA+K + G DG+ TA +E+ +
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTA---------LREIKLL 66
Query: 140 QKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN 199
Q+L HPN+ + A SN+ + D + +I++
Sbjct: 67 QELSHPNIIGLLDAFGHKSNISLVFDFMETD----------------------LEVIIKD 104
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
L + L +GL YLH I+HRD+K N+LLD LK+ADFG+A+
Sbjct: 105 NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYC 302
R + T Y APE+L G +Y G+ +W + C
Sbjct: 165 PNRAYXHQVVTRWYRAPELLFG------ARMYGVGVDMWAVGC 201
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 128/303 (42%), Gaps = 54/303 (17%)
Query: 86 RNLIAQGTYGSVYRGTY-DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
+N++ +G +G VY+G D VAVK L FQ EV + H
Sbjct: 43 KNILGRGGFGKVYKGRLADGTLVAVKRL--------KEERXQGGELQFQTEVEMISMAVH 94
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR---R 201
N+ + G + P++ V Y+ G++ L R R +
Sbjct: 95 RNLLRLRGFCM------TPTERLLV--------------YPYMANGSVASCL-RERPESQ 133
Query: 202 KKLALKIVIQLALDLSRGLSYLHSK---KIVHRDVKTENMLLDSQRTLKIADFGVARV-E 257
L ++AL +RGL+YLH KI+HRDVK N+LLD + + DFG+A++ +
Sbjct: 134 PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 193
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFA---D 314
++ GT+G++APE L + + DV+ +G+ L E+ + A D
Sbjct: 194 YKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 253
Query: 315 VS--------------SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKM 360
V A+V +L+ L + C ++ +RP+M EVV+M
Sbjct: 254 VMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRM 313
Query: 361 LEA 363
LE
Sbjct: 314 LEG 316
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 41/299 (13%)
Query: 66 RNESQRPKEEWEID---------LSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGE 116
RN+ Q EE E K D+ I +G++ +VY+G V V W E
Sbjct: 4 RNQQQDDIEELETKAVGXSNDGRFLKFDIE--IGRGSFKTVYKGLDTETTVEVA---WCE 58
Query: 117 DGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXX 176
+ T + R F++E + L HPN+ +F + T + K V
Sbjct: 59 --LQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWEST----VKGKKCIV------- 105
Query: 177 XXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVK 234
E G LK YL R + K+ K++ + +GL +LH++ I+HRD+K
Sbjct: 106 -----LVTELXTSGTLKTYLKRFKVXKI--KVLRSWCRQILKGLQFLHTRTPPIIHRDLK 158
Query: 235 TENMLLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSF 293
+N+ + ++KI D G+A ++ + GT + APE + K Y+ DVY+F
Sbjct: 159 CDNIFITGPTGSVKIGDLGLATLKRASFAKAV--IGTPEFXAPEXYEEK-YDESVDVYAF 215
Query: 294 GICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP-EIPRCCPSSLANIMRKCWDANAEKR 351
G C E + PY + A V ++P + + I+ C N ++R
Sbjct: 216 GXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDER 274
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + R LSYLH++ ++HRD+K++++LL S
Sbjct: 122 EFLEGGALTDIVTHTRMNEEQIATV---CLSVLRALSYLHNQGVIHRDIKSDSILLTSDG 178
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + P+ GT +MAPEV+ PY D++S GI + E+
Sbjct: 179 RIKLSDFGFCAQVSKEVPKR-KXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 304 DMPY 307
+ PY
Sbjct: 238 EPPY 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 142 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 193
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 194 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 247 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 300
Query: 351 R 351
R
Sbjct: 301 R 301
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G YG V + VAVK++D + ++E+ +
Sbjct: 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD--------MKRAVDCPENIKKEICINAM 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 62 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 101
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 102 MPEPDAQRFFHQLM----AGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 157
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 41/277 (14%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I QG G+VY QEVA++ ++ + + E+ V ++ +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNL---------QQQPKKELIINEILVMRENKNPN 79
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + + L + EYL GG+L + + +
Sbjct: 80 IVNYLDSYLVGDELWV--------------------VMEYLAGGSLTDVVTETCMDEGQI 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
V + L + L +LHS +++HRD+K++N+LL ++K+ DFG +
Sbjct: 120 AAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX 176
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP 326
GT +MAPEV+ K Y + D++S GI E+ + PY + + + ++ N P
Sbjct: 177 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP 235
Query: 327 EIPRCCPSSLANIMR----KCWDANAEKRPEMGEVVK 359
E+ P L+ I R +C + + EKR E+++
Sbjct: 236 ELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 114 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 165
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 166 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 219 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 272
Query: 351 R 351
R
Sbjct: 273 R 273
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 114 EYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 165
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 166 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 218
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 219 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 272
Query: 351 R 351
R
Sbjct: 273 R 273
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG+A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 MIDQQGYIKVTDFGLA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 107 EYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 158
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 159 LIDQQGYIQVTDFGFA-------KRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALG 211
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 212 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 265
Query: 351 R 351
R
Sbjct: 266 R 266
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 98/231 (42%), Gaps = 39/231 (16%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
+ +G +G V+ + D+ A+K + +A R +EV KL+HP
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELA--------REKVMREVKALAKLEHPG 64
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL-----IRNRR 201
+ ++ A + K + + NLK ++ I R
Sbjct: 65 IVRYFNAWL--------EKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+ + L I +Q+A + +LHSK ++HRD+K N+ +K+ DFG+ Q+
Sbjct: 117 RSVCLHIFLQIA----EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 262 RDM------------TGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+ TG+ GT YM+PE + G Y+ + D++S G+ L+E+
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 39/231 (16%)
Query: 88 LIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
++ QG +G V R D++ A+K + E+ ++T EV + L+H
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTIL----------SEVXLLASLNHQ 62
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY--LPGGNLKQYLIRNRRKK 203
V ++ A + N P Y + NL Q R+ +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ--RDEYWR 120
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA--------- 254
L +I+ LSY+HS+ I+HR++K N+ +D R +KI DFG+A
Sbjct: 121 LFRQIL--------EALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDI 172
Query: 255 -RVEAQN----PRDMTGETGTLGYMAPEVLQGK-PYNRRCDVYSFGICLWE 299
++++QN ++T GT Y+A EVL G YN + D YS GI +E
Sbjct: 173 LKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
M E T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 177 GTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +K+ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 MIDQQGYIKVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 103/228 (45%), Gaps = 26/228 (11%)
Query: 134 QEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLK 193
QE+A+ +KLDHPNV K V L P++ E + G +
Sbjct: 85 QEIAILKKLDHPNVVKLVEV------LDDPNED------------HLYMVFELVNQGPVM 126
Query: 194 QYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV 253
+ + + Q DL +G+ YLH +KI+HRD+K N+L+ +KIADFGV
Sbjct: 127 EVPTLKPLSEDQARFYFQ---DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV 183
Query: 254 ARVEAQNPRDMTGETGTLGYMAPEVLQG--KPYN-RRCDVYSFGICLWEIYCCDMPYPDL 310
+ + ++ GT +MAPE L K ++ + DV++ G+ L+ P+ D
Sbjct: 184 SNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
Query: 311 SFADVSSAVVRQNLR-PEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
+ S + Q L P+ P L +++ + D N E R + E+
Sbjct: 244 RIMCLHSKIKSQALEFPDQPDIA-EDLKDLITRMLDKNPESRIVVPEI 290
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 28/184 (15%)
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
SS + E+AV +K+ H N+ ++L + + S G
Sbjct: 65 SSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVS--------------------G 104
Query: 190 GNLKQYLI-RNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL---DSQRT 245
G L ++ + + +I+ LD + YLH IVHRD+K EN+L D +
Sbjct: 105 GELFDRIVEKGFYTEKDASTLIRQVLD---AVYYLHRMGIVHRDLKPENLLYYSQDEESK 161
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+ I+DFG++++E + M+ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 162 IMISDFGLSKMEGKGDV-MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYP 220
Query: 306 PYPD 309
P+ D
Sbjct: 221 PFYD 224
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 181
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 182 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 241
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
V+ Q P CP + ++ E RP+
Sbjct: 242 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPK 270
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 75/157 (47%), Gaps = 17/157 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ C + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK 230
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
V+ Q P CP + ++ E RP+
Sbjct: 231 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPKYA 261
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
GG+LK ++ + + A ++ GL LH ++IV+RD+K EN+LLD ++I
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
+D G+A V + + G GT+GYMAPEV++ + Y D ++ G L+E+ P+
Sbjct: 328 SDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 121/277 (43%), Gaps = 41/277 (14%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I QG G+VY QEVA++ ++ + + E+ V ++ +PN
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNL---------QQQPKKELIINEILVMRENKNPN 78
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + + L + EYL GG+L + + +
Sbjct: 79 IVNYLDSYLVGDELWV--------------------VMEYLAGGSLTDVVTETCMDEGQI 118
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
V + L + L +LHS +++HRD+K++N+LL ++K+ DFG +
Sbjct: 119 AAVCRECL---QALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSX 175
Query: 267 ETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP 326
GT +MAPEV+ K Y + D++S GI E+ + PY + + + ++ N P
Sbjct: 176 MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTP 234
Query: 327 EIPRCCPSSLANIMR----KCWDANAEKRPEMGEVVK 359
E+ P L+ I R +C + + EKR E+++
Sbjct: 235 ELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E++ GG+L ++ ++RR A A ++ L +LH K I++RD+K +N+LLD +
Sbjct: 104 EFVNGGDLMFHIQKSRRFDEARARF--YAAEIISALMFLHDKGIIYRDLKLDNVLLDHEG 161
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
K+ADFG+ + N GT Y+APE+LQ Y D ++ G+ L+E+ C
Sbjct: 162 HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGH 221
Query: 305 MPYPDLSFADVSSAVV 320
P+ + D+ A++
Sbjct: 222 APFEAENEDDLFEAIL 237
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
SS + E+AV +K+ H N+ T++ + + S G
Sbjct: 51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVS--------------------G 90
Query: 190 GNL-KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL---DSQRT 245
G L + L R + +VIQ L + YLH IVHRD+K EN+L +
Sbjct: 91 GELFDRILERGVYTEKDASLVIQQVLS---AVKYLHENGIVHRDLKPENLLYLTPEENSK 147
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDM 305
+ I DFG++++E M+ GT GY+APEVL KPY++ D +S G+ + + C
Sbjct: 148 IMITDFGLSKMEQNGI--MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYP 205
Query: 306 PY 307
P+
Sbjct: 206 PF 207
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Query: 185 EYLPGGNL----KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
EY+PGG+L Y + + K V+ LALD +HS ++HRDVK +NMLL
Sbjct: 155 EYMPGGDLVNLMSNYDVPEKWAKFYTAEVV-LALDA------IHSMGLIHRDVKPDNMLL 207
Query: 241 DSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP----YNRRCDVYSFGI 295
D LK+ADFG +++ GT Y++PEVL+ + Y R CD +S G+
Sbjct: 208 DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 267
Query: 296 CLWEIYCCDMPY 307
L+E+ D P+
Sbjct: 268 FLFEMLVGDTPF 279
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
GG+LK ++ + + A ++ GL LH ++IV+RD+K EN+LLD ++I
Sbjct: 268 GGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRI 327
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
+D G+A V + + G GT+GYMAPEV++ + Y D ++ G L+E+ P+
Sbjct: 328 SDLGLA-VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 102/229 (44%), Gaps = 44/229 (19%)
Query: 89 IAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I G +G + R N+ VAVK ++ GE + ++ ++E+ + L HPN
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIAANVKREIINHRSLRHPN 76
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR-NRRKKLA 205
+ +F + ++L I EY GG L + + R +
Sbjct: 77 IVRFKEVILTPTHLAI--------------------VMEYASGGELFERICNAGRFSEDE 116
Query: 206 LKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGVAR--VEAQNP 261
+ Q L G+SY H+ ++ HRD+K EN LLD LKI DFG ++ V P
Sbjct: 117 ARFFFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQP 173
Query: 262 RDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
+ GT Y+APEVL K Y+ + DV+S G+ L+ + P+ D
Sbjct: 174 K---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +++ DFG+A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 MIDQQGYIQVTDFGLA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 126/278 (45%), Gaps = 43/278 (15%)
Query: 89 IAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I QG G+VY QEVA++ ++ + + E+ V ++ +PN
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---------PKKELIINEILVMRENKNPN 79
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ ++ + + L + EYL GG+L + + +
Sbjct: 80 IVNYLDSYLVGDELWV--------------------VMEYLAGGSLTDVVTETCMDEGQI 119
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGV-ARVEAQNPRDMT 265
V + L + L +LHS +++HR++K++N+LL ++K+ DFG A++ + + T
Sbjct: 120 AAVCRECL---QALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST 176
Query: 266 GETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
GT +MAPEV+ K Y + D++S GI E+ + PY + + + ++ N
Sbjct: 177 M-VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGT 234
Query: 326 PEIPRCCPSSLANIMR----KCWDANAEKRPEMGEVVK 359
PE+ P L+ I R +C + + EKR E+++
Sbjct: 235 PELQN--PEKLSAIFRDFLNRCLEMDVEKRGSAKELIQ 270
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 106/274 (38%), Gaps = 31/274 (11%)
Query: 87 NLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
NL+ +G++ VYR + EVA+K++D A + Q EV + +L H
Sbjct: 17 NLLGKGSFAGVYRAESIHTGLEVAIKMID------KKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
P++ + N E G + +YL +NR K
Sbjct: 71 PSILELY--------------------NYFEDSNYVYLVLEMCHNGEMNRYL-KNRVKPF 109
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+ + G+ YLHS I+HRD+ N+LL +KIADFG+A
Sbjct: 110 SENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKH 169
Query: 265 TGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNL 324
GT Y++PE+ + DV+S G + + P+ + + + VV +
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADY 229
Query: 325 RPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
E+P +++ + N R + V+
Sbjct: 230 --EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY PGG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 MIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 79 DLSKLDMRNLIAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D + ++ I G +G + R N+ VAVK ++ GE + + ++E+
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREI 65
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
+ L HPN+ +F + ++L I EY GG L + +
Sbjct: 66 INHRSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERI 105
Query: 197 IR-NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGV 253
R + + Q L G+SY H+ ++ HRD+K EN LLD LKI DFG
Sbjct: 106 CNAGRFSEDEARFFFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGY 162
Query: 254 AR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
++ V P+ GT Y+APEVL K Y+ + DV+S G+ L+ + P+ D
Sbjct: 163 SKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 218
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 42/281 (14%)
Query: 82 KLDMRNLIAQGTYGSVYRGTYDNQEVAV---KLLDWGEDGMATTAETAALRSSFQQEVAV 138
K ++ I QG+YG V R +NQ A+ K+++ + + +++ EV +
Sbjct: 27 KYHLKGAIGQGSYGVV-RVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKT----EVRL 81
Query: 139 WQKLDHPNVTKFV------------------GASVGTSNLKIPSKTA--SVDGNXXXXXX 178
+KL HPN+ + G + N+ I T ++D
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 179 XXXXXXEYLPGG--NLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTE 236
E + G ++ L +R+KL I+ Q+ L YLH++ I HRD+K E
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF----SALHYLHNQGICHRDIKPE 197
Query: 237 NMLLDSQRT--LKIADFGVA----RVEAQNPRDMTGETGTLGYMAPEVLQ--GKPYNRRC 288
N L + ++ +K+ DFG++ ++ MT + GT ++APEVL + Y +C
Sbjct: 198 NFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257
Query: 289 DVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIP 329
D +S G+ L + +P+P ++ AD S V+ + L E P
Sbjct: 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP 298
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
GL +LH + I++RD+K EN+LLD ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 104/222 (46%), Gaps = 47/222 (21%)
Query: 89 IAQGTYGSVYRG---TYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHP 145
+ +GTY +VY+G DN ++ E+G TA +EV++ + L H
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTA---------IREVSLLKDLKHA 60
Query: 146 NVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL------IRN 199
N+ V ++ K+ ++ EYL +LKQYL I
Sbjct: 61 NI-------VTLHDIIHTEKSLTL-------------VFEYL-DKDLKQYLDDCGNIINM 99
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
KL L L RGL+Y H +K++HRD+K +N+L++ + LK+ADFG+AR ++
Sbjct: 100 HNVKLFL-------FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152
Query: 260 NPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
+ E TL Y P++L G Y+ + D++ G +E+
Sbjct: 153 PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEM 194
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
GL +LH + I++RD+K EN+LLD ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
GL +LH + I++RD+K EN+LLD ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 105/231 (45%), Gaps = 39/231 (16%)
Query: 84 DMRNLIAQGTYGSVYRGT--YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+ + +G G V + VAVK++D M + + ++E+ + +
Sbjct: 9 DLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD-----MKRAVDCP---ENIKKEICINKM 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRN-- 199
L+H NV KF G +GN EY GG L + +
Sbjct: 61 LNHENVVKFYGHRR--------------EGNIQYLFL------EYCSGGELFDRIEPDIG 100
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ A + QL G+ YLH I HRD+K EN+LLD + LKI+DFG+A V
Sbjct: 101 MPEPDAQRFFHQLMA----GVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRY 156
Query: 260 NPRD--MTGETGTLGYMAPEVLQGKPYNRR-CDVYSFGICLWEIYCCDMPY 307
N R+ + GTL Y+APE+L+ + ++ DV+S GI L + ++P+
Sbjct: 157 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY+ GG + +L R R A A + YLHS +++RD+K EN+L+D Q
Sbjct: 121 EYVAGGEMFSHLRRIGR--FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQG 178
Query: 245 TLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+++ DFG A + + G T GT Y+APE++ K YN+ D ++ G+ ++E+
Sbjct: 179 YIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEM 231
Query: 301 YCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
P+ FAD + +V +R P S L +++R + KR
Sbjct: 232 AAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%)
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
GL +LH + I++RD+K EN+LLD ++I+D G+A G GT G+MAPE+
Sbjct: 301 GLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPEL 360
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
L G+ Y+ D ++ G+ L+E+ P+
Sbjct: 361 LLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 79 DLSKLDMRNLIAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D + ++ I G +G + R N+ VAVK ++ GE + + ++E+
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREI 66
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
+ L HPN+ +F + ++L I EY GG L + +
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERI 106
Query: 197 IR-NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGV 253
R + + Q L G+SY H+ ++ HRD+K EN LLD LKI FG
Sbjct: 107 CNAGRFSEDEARFFFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 254 AR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
++ V P+D GT Y+APEVL K Y+ + DV+S G+ L+ + P+ D
Sbjct: 164 SKSSVLHSQPKDT---VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 142 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 193
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 194 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 247 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 300
Query: 351 R 351
R
Sbjct: 301 R 301
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G+ + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 65/127 (51%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G+ + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 122 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 173
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 174 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 226
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 227 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 280
Query: 351 R 351
R
Sbjct: 281 R 281
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 45/303 (14%)
Query: 72 PKEEWEIDLSKLDMRNL--IAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAA 127
P++ W D + D+++L I +G YGSV + + Q +AVK + +T +
Sbjct: 13 PEQHW--DFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRI-------RSTVDEKE 63
Query: 128 LRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
+ V + D P + +F GA + I + S +
Sbjct: 64 QKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFD--------------- 108
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRTL 246
+Y+ + +I+ ++ L + L++L KI+HRD+K N+LLD +
Sbjct: 109 ---KFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNI 165
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVL------QGKPYNRRCDVYSFGICLWEI 300
K+ DFG++ + + T + G YMAPE + QG Y+ R DV+S GI L+E+
Sbjct: 166 KLCDFGISG-QLVDSIAKTRDAGCRPYMAPERIDPSASRQG--YDVRSDVWSLGITLYEL 222
Query: 301 YCCDMPYPDL-SFADVSSAVVRQN---LRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
PYP S D + VV+ + L R S N + C + KRP+ E
Sbjct: 223 ATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282
Query: 357 VVK 359
++K
Sbjct: 283 LLK 285
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADEPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 142 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 193
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 194 LIDQQGYIQVTDFGFA-------KRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALG 246
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 247 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 300
Query: 351 R 351
R
Sbjct: 301 R 301
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 34/246 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD---NQEVAVKLLDWGEDGMATTAETAALR 129
K WE+ +L + G YGSV YD Q+VAVK L + T
Sbjct: 21 KTVWEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHARRT---- 74
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
+E+ + + L H NV + ++++ S+ V L G
Sbjct: 75 ---YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT---------------LMG 116
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
+L + + + L+ + V L L RGL Y+HS I+HRD+K N+ ++ L+I
Sbjct: 117 ADLNNIV---KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRIL 173
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
DFG+AR Q +MTG T Y APE+ L YN+ D++S G + E+ +P
Sbjct: 174 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
Query: 309 DLSFAD 314
+ D
Sbjct: 231 GSDYID 236
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 101/231 (43%), Gaps = 31/231 (13%)
Query: 84 DMRNLIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ +I +G + V R Q+ AVK++D + T+ ++E ++
Sbjct: 27 ELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAK----FTSSPGLSTEDLKREASICHM 82
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L HP++ + + +T S DG E++ G +L +++
Sbjct: 83 LKHPHIVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRAD 122
Query: 202 KKLALK--IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARV 256
+ + L Y H I+HRDVK EN+LL S+ +K+ DFGVA
Sbjct: 123 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQ 182
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
++ G GT +MAPEV++ +PY + DV+ G+ L+ + +P+
Sbjct: 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 185 EYLPGGNL----KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
EY+PGG+L Y + + + V+ LALD +HS +HRDVK +NMLL
Sbjct: 154 EYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDA------IHSMGFIHRDVKPDNMLL 206
Query: 241 DSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP----YNRRCDVYSFGI 295
D LK+ADFG ++ + GT Y++PEVL+ + Y R CD +S G+
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 266
Query: 296 CLWEIYCCDMPY 307
L+E+ D P+
Sbjct: 267 FLYEMLVGDTPF 278
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 116 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 167
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 168 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 220
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 221 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 274
Query: 351 R 351
R
Sbjct: 275 R 275
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P + D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
+ V+ Q P CP + + + E RP+
Sbjct: 234 WNKVIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 185 EYLPGGNL----KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
EY+PGG+L Y + + + V+ LALD +HS +HRDVK +NMLL
Sbjct: 154 EYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDA------IHSMGFIHRDVKPDNMLL 206
Query: 241 DSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP----YNRRCDVYSFGI 295
D LK+ADFG ++ + GT Y++PEVL+ + Y R CD +S G+
Sbjct: 207 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 266
Query: 296 CLWEIYCCDMPY 307
L+E+ D P+
Sbjct: 267 FLYEMLVGDTPF 278
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
V+ Q P CP + + + E RP+
Sbjct: 237 VIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 267
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKL----LDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
I +GTYG+V++ V L LD ++G+ ++A +E+ + ++L H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---------LREICLLKELKH 60
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
N+ + L + + D LK+Y + L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQD---------------------LKKYF-DSCNGDL 98
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+IV L +GL + HS+ ++HRD+K +N+L++ LK+ADFG+AR R
Sbjct: 99 DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCY 158
Query: 265 TGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEI 300
+ E TL Y P+VL G K Y+ D++S G E+
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 228
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 185 EYLPGGNL----KQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL 240
EY+PGG+L Y + + + V+ LALD +HS +HRDVK +NMLL
Sbjct: 149 EYMPGGDLVNLMSNYDVPEKWARFYTAEVV-LALDA------IHSMGFIHRDVKPDNMLL 201
Query: 241 DSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKP----YNRRCDVYSFGI 295
D LK+ADFG ++ + GT Y++PEVL+ + Y R CD +S G+
Sbjct: 202 DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGV 261
Query: 296 CLWEIYCCDMPY 307
L+E+ D P+
Sbjct: 262 FLYEMLVGDTPF 273
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 176 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 234
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 108 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 159
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 160 LIDEQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 212
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 213 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 266
Query: 351 R 351
R
Sbjct: 267 R 267
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P + D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
+ V+ Q P CP + + + E RP+
Sbjct: 234 WNKVIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 267
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 140 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 198
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 132 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 190
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 182
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 130 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 188
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 125 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 183
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 131 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 189
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 184
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTPCYTPY 184
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 84 DMRNLIAQGTYGSVYRGTYDNQ--EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D++ + +G + V R + E A K+++ T +A ++E + +K
Sbjct: 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 84
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNR 200
L HPN+ + + + + GG L + ++ R
Sbjct: 85 LQHPNIVRL--------------------HDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVE 257
+ IQ L+ ++Y HS IVHR++K EN+LL S+ +K+ADFG+A +E
Sbjct: 125 YSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IE 180
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
+ G GT GY++PEVL+ PY++ D+++ G+ L+ + P+ D
Sbjct: 181 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
V+ Q P CP + + + E RP+
Sbjct: 237 VIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 267
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 83 LDMRNLIAQGTYGSVYR-----GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
++ ++ +G YG V++ G + A+K+L A A + + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-----KAMIVRNAKDTAHTKAERN 73
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ +++ HP + + A L + EYL GG L +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYL--------------------ILEYLSGGEL---FM 110
Query: 198 RNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
+ R+ + ++ L ++S L +LH K I++RD+K EN++L+ Q +K+ DFG+ +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVS 316
+ GT+ YMAPE+L +NR D +S G ++++ P+ +
Sbjct: 171 SIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 317 SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+++ L +P ++++K NA R
Sbjct: 231 DKILKCKL--NLPPYLTQEARDLLKKLLKRNAASR 263
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 84 DMRNLIAQGTYGSVYRGTYDNQ--EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D++ + +G + V R + E A K+++ T +A ++E + +K
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNR 200
L HPN+ + + + + GG L + ++ R
Sbjct: 62 LQHPNIVRL--------------------HDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVE 257
+ IQ L+ ++Y HS IVHR++K EN+LL S+ +K+ADFG+A +E
Sbjct: 102 YSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IE 157
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
+ G GT GY++PEVL+ PY++ D+++ G+ L+ + P+ D
Sbjct: 158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 83 LDMRNLIAQGTYGSVYR-----GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVA 137
++ ++ +G YG V++ G + A+K+L A A + + E
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-----KAMIVRNAKDTAHTKAERN 73
Query: 138 VWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI 197
+ +++ HP + + A L + EYL GG L +
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYL--------------------ILEYLSGGEL---FM 110
Query: 198 RNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
+ R+ + ++ L ++S L +LH K I++RD+K EN++L+ Q +K+ DFG+ +
Sbjct: 111 QLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVS 316
+ GT+ YMAPE+L +NR D +S G ++++ P+ +
Sbjct: 171 SIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTI 230
Query: 317 SAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKR 351
+++ L +P ++++K NA R
Sbjct: 231 DKILKCKL--NLPPYLTQEARDLLKKLLKRNAASR 263
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 17/160 (10%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 108 LXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P + D
Sbjct: 168 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 226
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
+ V+ Q P CP + + + E RP+
Sbjct: 227 WNKVIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 260
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 84 DMRNLIAQGTYGSVYRGTYDNQ--EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D++ + +G + V R + E A K+++ T +A ++E + +K
Sbjct: 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 61
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNR 200
L HPN+ + + + + GG L + ++ R
Sbjct: 62 LQHPNIVRL--------------------HDSIQEESFHYLVFDLVTGGELFEDIVAREF 101
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVE 257
+ IQ L+ ++Y HS IVHR++K EN+LL S+ +K+ADFG+A +E
Sbjct: 102 YSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IE 157
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
+ G GT GY++PEVL+ PY++ D+++ G+ L+ + P+ D
Sbjct: 158 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 209
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLG 272
+ + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T T
Sbjct: 124 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTEPCYTPY 182
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y+APEVL + Y++ CD++S G+ ++ + C P+
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 74/155 (47%), Gaps = 17/155 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT E T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
V+ Q P CP + ++ E RP+
Sbjct: 237 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPK 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 105/232 (45%), Gaps = 37/232 (15%)
Query: 84 DMRNLIAQGTYGSVYRGTYDNQ--EVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D++ + +G + V R + E A K+++ T +A ++E + +K
Sbjct: 8 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIIN-------TKKLSARDFQKLEREARICRK 60
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLI-RNR 200
L HPN+ + + + + GG L + ++ R
Sbjct: 61 LQHPNIVRL--------------------HDSIQEESFHYLVFDLVTGGELFEDIVAREF 100
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVE 257
+ IQ L+ ++Y HS IVHR++K EN+LL S+ +K+ADFG+A +E
Sbjct: 101 YSEADASHCIQQILE---SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IE 156
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
+ G GT GY++PEVL+ PY++ D+++ G+ L+ + P+ D
Sbjct: 157 VNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWD 208
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVK--LLDWGEDGMATTAETAALRSSFQQ 134
++SK + I QGT+G V++ + Q+VA+K L++ ++G TA +
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---------LR 66
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+ + Q L H NV + +I AS E+ G L
Sbjct: 67 EIKILQLLKHENVVNLI---------EICRTKASPYNRCKASIYLVFDFCEHDLAGLLSN 117
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
L++ ++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ LK+ADFG+A
Sbjct: 118 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 255 R----VEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIY 301
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E + GG L + + + ++ D+ + +LHS I HRDVK EN+L S+
Sbjct: 106 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE 165
Query: 245 ---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
LK+ DFG A+ QN + T Y+APEVL + Y++ CD++S G+ ++ +
Sbjct: 166 KDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 223
Query: 302 CCDMPY 307
C P+
Sbjct: 224 CGFPPF 229
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
++D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 IIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 34/246 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD---NQEVAVKLLDWGEDGMATTAETAALR 129
K WE+ +L + G YGSV YD Q+VAVK L + T
Sbjct: 21 KTVWEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHARRT---- 74
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
+E+ + + L H NV + ++++ S+ V L G
Sbjct: 75 ---YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT---------------LMG 116
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
+L + + + L+ + V L L RGL Y+HS I+HRD+K N+ ++ L+I
Sbjct: 117 ADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRIL 173
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
DFG+AR Q +MTG T Y APE+ L YN+ D++S G + E+ +P
Sbjct: 174 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 230
Query: 309 DLSFAD 314
+ D
Sbjct: 231 GSDYID 236
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 5/126 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E + GG L + + + ++ D+ + +LHS I HRDVK EN+L S+
Sbjct: 87 ECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE 146
Query: 245 ---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
LK+ DFG A+ QN + T Y+APEVL + Y++ CD++S G+ ++ +
Sbjct: 147 KDAVLKLTDFGFAKETTQNA--LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL 204
Query: 302 CCDMPY 307
C P+
Sbjct: 205 CGFPPF 210
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 107/232 (46%), Gaps = 32/232 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVK--LLDWGEDGMATTAETAALRSSFQQ 134
++SK + I QGT+G V++ + Q+VA+K L++ ++G TA LR
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA----LR----- 66
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+ + Q L H NV + +I AS E+ G L
Sbjct: 67 EIKILQLLKHENVVNLI---------EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
L++ ++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ LK+ADFG+A
Sbjct: 118 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 255 R----VEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIY 301
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 87/181 (48%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++++ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYQMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 9/170 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAP 276
+G+ YLH+ +++HRD+K N+ L+ +KI DFG+A ++E R T GT Y+AP
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYIAP 211
Query: 277 EVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSL 336
EVL K ++ D++S G L+ + P+ + S + +++N +PR
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVA 269
Query: 337 ANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCFCFSP 386
+ ++R+ A+ RP + E++ D G P T C P
Sbjct: 270 SALIRRMLHADPTLRPSVAELL-----TDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVK--LLDWGEDGMATTAETAALRSSFQQ 134
++SK + I QGT+G V++ + Q+VA+K L++ ++G TA +
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---------LR 66
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+ + Q L H NV + +I AS E+ G L
Sbjct: 67 EIKILQLLKHENVVNLI---------EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 117
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
L++ ++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ LK+ADFG+A
Sbjct: 118 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 255 R----VEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIY 301
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 138/325 (42%), Gaps = 49/325 (15%)
Query: 66 RNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVKLLDWGEDGMATTA 123
R++S + E+ +L +R ++A+G + VY +E A+K L E+
Sbjct: 13 RDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEE------ 66
Query: 124 ETAALRSSFQQEVAVWQKLD-HPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXX 182
+ QEV +KL HPN+ +F A AS+
Sbjct: 67 ---EKNRAIIQEVCFMKKLSGHPNIVQFCSA-------------ASIGKEESDTGQAEFL 110
Query: 183 XXEYLPGGNLKQYLIR-NRRKKLALKIVIQLALDLSRGLSYLHSKK--IVHRDVKTENML 239
L G L ++L + R L+ V+++ R + ++H +K I+HRD+K EN+L
Sbjct: 111 LLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170
Query: 240 LDSQRTLKIADFGVARVEAQNP-------------RDMTGETGTLGYMAPEVL---QGKP 283
L +Q T+K+ DFG A + P ++T T + Y PE++ P
Sbjct: 171 LSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPM-YRTPEIIDLYSNFP 229
Query: 284 YNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKC 343
+ D+++ G L+ + P+ D + + + + ++ P + + +++R
Sbjct: 230 IGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNG--KYSIPPHDTQY--TVFHSLIRAM 285
Query: 344 WDANAEKRPEMGEVVKMLEAIDTSK 368
N E+R + EVV L+ I ++
Sbjct: 286 LQVNPEERLSIAEVVHQLQEIAAAR 310
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 32/232 (13%)
Query: 79 DLSKLDMRNLIAQGTYGSVYRGTY--DNQEVAVK--LLDWGEDGMATTAETAALRSSFQQ 134
++SK + I QGT+G V++ + Q+VA+K L++ ++G TA +
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITA---------LR 65
Query: 135 EVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQ 194
E+ + Q L H NV + +I AS E+ G L
Sbjct: 66 EIKILQLLKHENVVNLI---------EICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSN 116
Query: 195 YLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA 254
L++ ++ K V+Q+ L+ GL Y+H KI+HRD+K N+L+ LK+ADFG+A
Sbjct: 117 VLVKFTLSEI--KRVMQMLLN---GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
Query: 255 R----VEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIY 301
R + P TL Y PE+L G + Y D++ G + E++
Sbjct: 172 RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R T GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 167 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 224
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 225 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 278
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 279 RLPITCLTIPP 289
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 107 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R T GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 167 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 224
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 225 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 278
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 279 RLPITCLTIPP 289
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 191 NLKQYLIR-----NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
NLK ++ R +R + L I IQ+A + +LHSK ++HRD+K N+
Sbjct: 147 NLKDWMNRRCSLEDREHGVCLHIFIQIA----EAVEFLHSKGLMHRDLKPSNIFFTMDDV 202
Query: 246 LKIADFGVARVEAQNPRDMT------------GETGTLGYMAPEVLQGKPYNRRCDVYSF 293
+K+ DFG+ Q+ + T G+ GT YM+PE + G Y+ + D++S
Sbjct: 203 VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSL 262
Query: 294 GICLWEI 300
G+ L+E+
Sbjct: 263 GLILFEL 269
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 97 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 153
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 154 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 212
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 213 EPPYFNEPPLK----AMKMIRDNLPPRL 236
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 101 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 157
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 158 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 216
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 217 EPPYFNEPPLK----AMKMIRDNLPPRL 240
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 111 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 170
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R T GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 171 VEYDGERKKT-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 228
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 229 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 282
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 283 RLPITCLTIPP 293
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 228 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 284
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 285 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 343
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 344 EPPYFNEPPLK----AMKMIRDNLPPRL 367
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 108 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 164
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 165 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 223
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 224 EPPYFNEPPLK----AMKMIRDNLPPRL 247
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 106 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 162
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 163 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 221
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 222 EPPYFNEPPLK----AMKMIRDNLPPRL 245
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 36/185 (19%)
Query: 133 QQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNL 192
+ E+ V +L HPN+ K + P++ + V E + GG L
Sbjct: 96 RTEIGVLLRLSHPNIIKL------KEIFETPTEISLV--------------LELVTGGEL 135
Query: 193 KQYLIRN-----RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDS---QR 244
++ R A+K +++ ++YLH IVHRD+K EN+L +
Sbjct: 136 FDRIVEKGYYSERDAADAVKQILE-------AVAYLHENGIVHRDLKPENLLYATPAPDA 188
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
LKIADFG++++ ++ M GT GY APE+L+G Y D++S GI + + C
Sbjct: 189 PLKIADFGLSKI-VEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGF 247
Query: 305 MPYPD 309
P+ D
Sbjct: 248 EPFYD 252
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 12/148 (8%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E+L GG L + R + + V L + + LS LH++ ++HRD+K++++LL
Sbjct: 151 EFLEGGALTDIVTHTRMNEEQIAAV---CLAVLQALSVLHAQGVIHRDIKSDSILLTHDG 207
Query: 245 TLKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K++DFG A+V + PR GT +MAPE++ PY D++S GI + E+
Sbjct: 208 RVKLSDFGFCAQVSKEVPRR-KXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDG 266
Query: 304 DMPY---PDLSFADVSSAVVRQNLRPEI 328
+ PY P L + ++R NL P +
Sbjct: 267 EPPYFNEPPLK----AMKMIRDNLPPRL 290
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 35/171 (20%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMR 341
+ ++E+ P+ FAD + +V +R P S L +++R
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLR 270
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 211 QLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGE 267
++ + + YLHS I HRDVK EN+L S+R LK+ DFG A+ E + +T
Sbjct: 165 EIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTSHNSLTTP 223
Query: 268 TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
T Y+APEVL + Y++ CD +S G+ + + C P+
Sbjct: 224 CYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 79 DLSKLDMRNLIAQGTYG--SVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEV 136
D + ++ I G +G + R N+ VAVK ++ GE + + ++E+
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGE----------KIDENVKREI 66
Query: 137 AVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYL 196
+ L HPN+ +F + ++L I EY GG L + +
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAI--------------------VMEYASGGELFERI 106
Query: 197 IR-NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT--LKIADFGV 253
R + + Q L G+SY H+ ++ HRD+K EN LLD LKI FG
Sbjct: 107 CNAGRFSEDEARFFFQ---QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGY 163
Query: 254 AR--VEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDMPYPD 309
++ V P+ GT Y+APEVL K Y+ + DV+S G+ L+ + P+ D
Sbjct: 164 SKSSVLHSQPK---STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFED 219
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 36/217 (16%)
Query: 89 IAQGTYGSVYRGTYDNQEVAVKL----LDWGEDGMATTAETAALRSSFQQEVAVWQKLDH 144
I +GTYG+V++ V L LD ++G+ ++A +E+ + ++L H
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSA---------LREICLLKELKH 60
Query: 145 PNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKL 204
N+ + L + + D LK+Y + L
Sbjct: 61 KNIVRLHDVLHSDKKLTLVFEFCDQD---------------------LKKYF-DSCNGDL 98
Query: 205 ALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDM 264
+IV L +GL + HS+ ++HRD+K +N+L++ LK+A+FG+AR R
Sbjct: 99 DPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCY 158
Query: 265 TGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEI 300
+ E TL Y P+VL G K Y+ D++S G E+
Sbjct: 159 SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 34/246 (13%)
Query: 73 KEEWEIDLSKLDMRNLIAQGTYGSVYRGTYD---NQEVAVKLLDWGEDGMATTAETAALR 129
K WE+ +L + G YGSV YD Q+VAVK L + T
Sbjct: 13 KTVWEVP-QRLQGLRPVGSGAYGSVC-SAYDARLRQKVAVKKLSRPFQSLIHARRT---- 66
Query: 130 SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPG 189
+E+ + + L H NV + ++++ S+ V L G
Sbjct: 67 ---YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTT---------------LMG 108
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIA 249
+L + + + L+ + V L L RGL Y+HS I+HRD+K N+ ++ L+I
Sbjct: 109 ADLNNIV---KCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRIL 165
Query: 250 DFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
DFG+AR Q +MTG T Y APE+ L YN+ D++S G + E+ +P
Sbjct: 166 DFGLAR---QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFP 222
Query: 309 DLSFAD 314
+ D
Sbjct: 223 GSDYID 228
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 238 VIEQLGTP-----CPEFMKKL 253
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
V+ Q P CP + + + E RP+
Sbjct: 275 VIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 305
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 117 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 175
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 176 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 235
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 236 VIEQLGTP-----CPEFMKKL 251
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 214
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 215 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 274
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMG 355
V+ Q P CP + + + E RP+
Sbjct: 275 VIEQLGTP-----CPEFMKKLQPTVRNY-VENRPKYA 305
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 237 VIEQLGTP-----CPEFMKKL 252
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 111 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 169
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 170 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 229
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 230 VIEQLGTP-----CPEFMKKL 245
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 237
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 238 VIEQLGTP-----CPEFMKKL 253
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT Y+AP ++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 231 VIEQLGTP-----CPEFMKKL 246
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 16/141 (11%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 170
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P + D +
Sbjct: 171 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK 230
Query: 319 VVRQNLRPEIPRCCPSSLANI 339
V+ Q P CP + +
Sbjct: 231 VIEQLGTP-----CPEFMKKL 246
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
+L G +L + + +KL V L + RGL Y+HS I+HRD+K N+ ++
Sbjct: 107 HLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXE 163
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCD 304
LKI DFG+AR +MTG T Y APE+ L YN+ D++S G + E+
Sbjct: 164 LKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 305 MPYPDLSFADVSSAVVR 321
+P D ++R
Sbjct: 221 TLFPGTDHIDQLKLILR 237
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMTGETGTLGYM 274
+G+ YLH+ +++HRD+K N+ L+ +KI DFG+A + + +D+ GT Y+
Sbjct: 137 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 193
Query: 275 APEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS 334
APEVL K ++ D++S G L+ + P+ + + + +PR
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY--SVPRHINP 251
Query: 335 SLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCFCFSP 386
+ ++R+ A+ RP + E++ D G P T C P
Sbjct: 252 VASALIRRMLHADPTLRPSVAELL-----TDEFFTSGYAPMRLPTSCLTVPP 298
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 13/172 (7%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA---RVEAQNPRDMTGETGTLGYM 274
+G+ YLH+ +++HRD+K N+ L+ +KI DFG+A + + +D+ GT Y+
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL---CGTPNYI 209
Query: 275 APEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPS 334
APEVL K ++ D++S G L+ + P+ + S + +++N +PR
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINP 267
Query: 335 SLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCFCFSP 386
+ ++R+ A+ RP + E++ D G P T C P
Sbjct: 268 VASALIRRMLHADPTLRPSVAELL-----TDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 177
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 178 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 237
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
V+ Q P CP + ++ E RP+
Sbjct: 238 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPK 266
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATR 197
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
V+ Q P CP + ++ E RP+
Sbjct: 237 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPK 265
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATR 191
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATR 188
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 206 LKIVIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVAR 255
L VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
A MT T Y APEV+ G Y D++S G + E+ + +P D
Sbjct: 175 T-AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 316 SSAVVRQ 322
+ V+ Q
Sbjct: 234 WNKVIEQ 240
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDEMTGYVATR 192
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 131 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 190
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 191 VEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 248
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 249 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 302
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 303 RLPITCLTIPP 313
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDEMTGYVATR 191
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 129 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 188
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 189 VEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 246
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 247 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 300
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 301 RLPITCLTIPP 311
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 88/174 (50%), Gaps = 17/174 (9%)
Query: 187 LPGGNLKQYLIRN-RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
L GG+L+ +L +N K+ +K+ I +L L YL +++I+HRD+K +N+LLD
Sbjct: 97 LLGGDLRYHLQQNVHFKEETVKLFI---CELVMALDYLQNQRIIHRDMKPDNILLDEHGH 153
Query: 246 LKIADFGVARVEAQNPRD--MTGETGTLGYMAPEVL---QGKPYNRRCDVYSFGICLWEI 300
+ I DF +A A PR+ +T GT YMAPE+ +G Y+ D +S G+ +E+
Sbjct: 154 VHITDFNIA---AMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210
Query: 301 YCCDMPYPDLSFADVSSAVVRQNLRPEI---PRCCPSSLANIMRKCWDANAEKR 351
PY S SS + + P + ++++K + N ++R
Sbjct: 211 LRGRRPYHIRS--STSSKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQR 262
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTLGYMAP 276
+G+ YLH+ +++HRD+K N+ L+ +KI DFG+A ++E R GT Y+AP
Sbjct: 153 QGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK-KXLCGTPNYIAP 211
Query: 277 EVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSL 336
EVL K ++ D++S G L+ + P+ + S + +++N +PR
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPF-ETSCLKETYIRIKKN-EYSVPRHINPVA 269
Query: 337 ANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCFCFSP 386
+ ++R+ A+ RP + E++ D G P T C P
Sbjct: 270 SALIRRMLHADPTLRPSVAELL-----TDEFFTSGYAPMRLPTSCLTVPP 314
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR A +MTG T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATR 193
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR A +MTG T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATR 193
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR A +MTG T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD---EMTGYVATR 193
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 176
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
MT T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 177 GTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 236
Query: 319 VVRQ 322
V+ Q
Sbjct: 237 VIEQ 240
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-R 255
+ RRK L + G YLH +++HRD+K N+ L+ +KI DFG+A +
Sbjct: 105 LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 164
Query: 256 VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADV 315
VE R GT Y+APEVL K ++ DV+S G ++ + P+ + S
Sbjct: 165 VEYDGERKKV-LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-ETSCLKE 222
Query: 316 SSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPE 375
+ +++N IP+ A++++K + RP + E++ D G IP
Sbjct: 223 TYLRIKKN-EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN-----DEFFTSGYIPA 276
Query: 376 DQATGCFCFSP 386
C P
Sbjct: 277 RLPITCLTIPP 287
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 5/126 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E L GG L + + ++K + + L +S++H +VHRD+K EN+L +
Sbjct: 86 ELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN 143
Query: 245 ---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+KI DFG AR++ + + + TL Y APE+L Y+ CD++S G+ L+ +
Sbjct: 144 DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML 203
Query: 302 CCDMPY 307
+P+
Sbjct: 204 SGQVPF 209
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 35/181 (19%)
Query: 185 EYLPGGNLKQYLIRNRR------KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
EY+ GG + +L R R + A +IV+ YLHS +++RD+K EN+
Sbjct: 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF--------EYLHSLDLIYRDLKPENL 172
Query: 239 LLDSQRTLKIADFGVARVEAQNPRDMTGET----GTLGYMAPEVLQGKPYNRRCDVYSFG 294
L+D Q +++ DFG A + + G T GT +APE++ K YN+ D ++ G
Sbjct: 173 LIDQQGYIQVTDFGFA-------KRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALG 225
Query: 295 ICLWEIYCCDMPYPDLSFAD----VSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEK 350
+ ++E+ P+ FAD + +V +R P S L +++R + K
Sbjct: 226 VLIYEMAAGYPPF----FADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTK 279
Query: 351 R 351
R
Sbjct: 280 R 280
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
+L G +L + + +KL V L + RGL Y+HS I+HRD+K N+ ++
Sbjct: 107 HLMGADLNNIV---KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE 163
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCD 304
LKI DFG+AR +MTG T Y APE+ L YN+ D++S G + E+
Sbjct: 164 LKILDFGLAR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 305 MPYPDLSFADVSSAVVR 321
+P D ++R
Sbjct: 221 TLFPGTDHIDQLKLILR 237
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGXVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARV-ADPDHDHTGFLTEYVATRWY 193
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
APE+ L K Y + D++S G L E+ +P + D
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 235
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 141 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 197
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 142 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 198
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Query: 321 R 321
R
Sbjct: 249 R 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 132 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 188
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 189 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 248
Query: 321 R 321
R
Sbjct: 249 R 249
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 136 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 192
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 193
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Query: 321 R 321
R
Sbjct: 256 R 256
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Query: 321 R 321
R
Sbjct: 257 R 257
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 197 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Query: 321 R 321
R
Sbjct: 257 R 257
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 188
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 193
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 140 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 196
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 195
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 196 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 255
Query: 321 R 321
R
Sbjct: 256 R 256
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 7/137 (5%)
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
+L G +L + + +KL V L + RGL Y+HS I+HRD+K N+ ++
Sbjct: 107 HLMGADLNNIV---KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSE 163
Query: 246 LKIADFGVARVEAQNPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCD 304
LKI DFG+ R +MTG T Y APE+ L YN+ D++S G + E+
Sbjct: 164 LKILDFGLCR---HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
Query: 305 MPYPDLSFADVSSAVVR 321
+P D ++R
Sbjct: 221 TLFPGTDHIDQLKLILR 237
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 153 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 209
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 137 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 193
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 195
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
APE+ L K Y + D++S G L E+ +P + D
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 321 R 321
R
Sbjct: 243 R 243
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Query: 186 YLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT 245
+L G +L + L + + L+ + + RGL Y+HS ++HRD+K N+LL++
Sbjct: 126 HLMGADLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD 182
Query: 246 LKIADFGVARVEAQNPRDMTG----ETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEI 300
LKI DFG+ARV A D TG T Y APE+ L K Y + D++S G L E+
Sbjct: 183 LKICDFGLARV-ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
Query: 301 YCCDMPYPDLSFAD 314
+P + D
Sbjct: 242 LSNRPIFPGKHYLD 255
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 191
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 122 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 178
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 179 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 238
Query: 321 R 321
R
Sbjct: 239 R 239
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 183
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 129 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 185
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 236
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 126 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 182
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+MTG T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 183 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 242
Query: 321 R 321
R
Sbjct: 243 R 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 135 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 191
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 132 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 188
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 47/240 (19%)
Query: 87 NLIAQG-TYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSS-------------F 132
NL QG T G + Y E + WGE +A T R++ F
Sbjct: 13 NLYFQGSTKGDI--NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRF 70
Query: 133 QQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNL 192
+QE+ + + LDHPN+ + +++ + E GG L
Sbjct: 71 KQEIEIMKSLDHPNIIRLYETFEDNTDIYL--------------------VMELCTGGEL 110
Query: 193 KQYLIRNR--RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL--DSQRT-LK 247
+ ++ R R+ A +I+ D+ ++Y H + HRD+K EN L DS + LK
Sbjct: 111 FERVVHKRVFRESDAARIM----KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 166
Query: 248 IADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
+ DFG+A + + M + GT Y++P+VL+G Y CD +S G+ ++ + C P+
Sbjct: 167 LIDFGLA-ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 128 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 184
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 127 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 183
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN---PRDMTGET--G 269
++ GL YLH +HRDVK N+LL +++IADFGV+ A R+ +T G
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 188
Query: 270 TLGYMAPEVL-QGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP-- 326
T +MAPEV+ Q + Y+ + D++SFGI E+ PY V + QN P
Sbjct: 189 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSL 247
Query: 327 -------EIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
E+ + S ++ C + EKRP E+++
Sbjct: 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMTGYVATR 182
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VIQ+ LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR A
Sbjct: 120 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-A 178
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSA 318
M T Y APEV+ G Y D++S G + E+ + +P D +
Sbjct: 179 GTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK 238
Query: 319 VVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPE 353
V+ Q P CP + ++ E RP+
Sbjct: 239 VIEQLGTP-----CPEFMKK-LQPTVRTYVENRPK 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN---PRDMTGET--G 269
++ GL YLH +HRDVK N+LL +++IADFGV+ A R+ +T G
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVG 183
Query: 270 TLGYMAPEVL-QGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRP-- 326
T +MAPEV+ Q + Y+ + D++SFGI E+ PY V + QN P
Sbjct: 184 TPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-LMLTLQNDPPSL 242
Query: 327 -------EIPRCCPSSLANIMRKCWDANAEKRPEMGEVVK 359
E+ + S ++ C + EKRP E+++
Sbjct: 243 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 282
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 220 LSYLHSKKIVHRDVKTENMLLDSQ---RTLKIADFGVARVEAQNPRDM-TGETGTLGYMA 275
++++H IVHRD+K EN+LL S+ +K+ADFG+A +E Q + G GT GY++
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFAGTPGYLS 201
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PE 327
PEVL+ PY + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 202 PEVLRKDPYGKPVDIWACGVIL---YILLVGYP--PFWDEDQHKLYQQIKAGAYDFPSPE 256
Query: 328 IPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCF 382
P + N++ + N KR + +K S M+ + C
Sbjct: 257 WDTVTPEA-KNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECL 310
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLXEXVATRWY 198
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPS 164
++VA+K++ + + + E A + + E+ + +KL+HP + +KI +
Sbjct: 42 KKVAIKIISKRKFAIGSARE-ADPALNVETEIEILKKLNHPCI------------IKIKN 88
Query: 165 KTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLH 224
+ D E + GG L ++ N+R K A + + L+ + YLH
Sbjct: 89 FFDAED---------YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 137
Query: 225 SKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG 281
I+HRD+K EN+LL SQ +KI DFG +++ + M GT Y+APEVL
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 196
Query: 282 ---KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
YNR D +S G+ L + C YP S
Sbjct: 197 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFS 226
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPS 164
++VA+K++ + + + E A + + E+ + +KL+HP + +KI +
Sbjct: 36 KKVAIKIISKRKFAIGSARE-ADPALNVETEIEILKKLNHPCI------------IKIKN 82
Query: 165 KTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLH 224
+ D E + GG L ++ N+R K A + + L+ + YLH
Sbjct: 83 FFDAED---------YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 225 SKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG 281
I+HRD+K EN+LL SQ +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 282 ---KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
YNR D +S G+ L + C YP S
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFS 220
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPS 164
++VA+K++ + + + E A + + E+ + +KL+HP + +KI +
Sbjct: 36 KKVAIKIISKRKFAIGSARE-ADPALNVETEIEILKKLNHPCI------------IKIKN 82
Query: 165 KTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLH 224
+ D E + GG L ++ N+R K A + + L+ + YLH
Sbjct: 83 FFDAED---------YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 225 SKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG 281
I+HRD+K EN+LL SQ +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 282 ---KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
YNR D +S G+ L + C YP S
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFS 220
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 11/102 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VI + LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR +
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
N MT T Y APEV+ G Y D++S G + E+
Sbjct: 176 TNFM-MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPS 164
++VA+K++ + + + E A + + E+ + +KL+HP + +KI +
Sbjct: 35 KKVAIKIISKRKFAIGSARE-ADPALNVETEIEILKKLNHPCI------------IKIKN 81
Query: 165 KTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLH 224
+ D E + GG L ++ N+R K A + + L+ + YLH
Sbjct: 82 FFDAED---------YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 130
Query: 225 SKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG 281
I+HRD+K EN+LL SQ +KI DFG +++ + M GT Y+APEVL
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 189
Query: 282 ---KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
YNR D +S G+ L + C YP S
Sbjct: 190 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFS 219
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 195
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
APE+ L K Y + D++S G L E+ +P + D
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 99/213 (46%), Gaps = 34/213 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPS 164
++VA+K++ + + + E A + + E+ + +KL+HP + +KI +
Sbjct: 36 KKVAIKIISKRKFAIGSARE-ADPALNVETEIEILKKLNHPCI------------IKIKN 82
Query: 165 KTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLH 224
+ D E + GG L ++ N+R K A + + L+ + YLH
Sbjct: 83 FFDAED---------YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLH 131
Query: 225 SKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG 281
I+HRD+K EN+LL SQ +KI DFG +++ + M GT Y+APEVL
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVS 190
Query: 282 ---KPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
YNR D +S G+ L + C YP S
Sbjct: 191 VGTAGYNRAVDCWSLGVIL---FICLSGYPPFS 220
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 191
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 137 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 195
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
APE+ L K Y + D++S G L E+ +P + D
Sbjct: 196 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 237
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 143 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 201
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 202 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 193
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 133 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 191
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 192 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 140 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 198
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 199 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 44/212 (20%)
Query: 114 WGEDGMATTAETAALRSS-------------FQQEVAVWQKLDHPNVTKFVGASVGTSNL 160
WGE +A T R++ F+QE+ + + LDHPN+ + +++
Sbjct: 22 WGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDI 81
Query: 161 KIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR--RKKLALKIVIQLALDLSR 218
+ E GG L + ++ R R+ A +I+ D+
Sbjct: 82 YL--------------------VMELCTGGELFERVVHKRVFRESDAARIM----KDVLS 117
Query: 219 GLSYLHSKKIVHRDVKTENMLL--DSQRT-LKIADFGVARVEAQNPRDMTGETGTLGYMA 275
++Y H + HRD+K EN L DS + LK+ DFG+A + + M + GT Y++
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFKPGKMMRTKVGTPYYVS 176
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
P+VL+G Y CD +S G+ ++ + C P+
Sbjct: 177 PQVLEGL-YGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 141 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 199
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 200 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 132 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 190
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 191 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 135 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 193
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 194 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 213
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E + GG L ++ N+R K A + + L+ + YLH I+HRD+K EN+LL SQ
Sbjct: 233 ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQE 290
Query: 245 ---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG---KPYNRRCDVYSFGICLW 298
+KI DFG +++ + M GT Y+APEVL YNR D +S G+ L
Sbjct: 291 EDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL- 348
Query: 299 EIYCCDMPYPDLS 311
+ C YP S
Sbjct: 349 --FICLSGYPPFS 359
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+LL++ LKI DFG+ARV A D TG T Y
Sbjct: 139 RGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV-ADPDHDHTGFLTEYVATRWY 197
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
APE+ L K Y + D++S G L E+ +P + D + ++
Sbjct: 198 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E + GG L ++ N+R K A + + L+ + YLH I+HRD+K EN+LL SQ
Sbjct: 219 ELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA--VQYLHENGIIHRDLKPENVLLSSQE 276
Query: 245 ---TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG---KPYNRRCDVYSFGICLW 298
+KI DFG +++ + M GT Y+APEVL YNR D +S G+ L
Sbjct: 277 EDCLIKITDFGHSKILGETSL-MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL- 334
Query: 299 EIYCCDMPYPDLS 311
+ C YP S
Sbjct: 335 --FICLSGYPPFS 345
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI D+G+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 196
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+M G T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 197 DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 256
Query: 321 R 321
R
Sbjct: 257 R 257
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG----ETGTLGY 273
RGL Y+HS ++HRD+K N+L+++ LKI DFG+AR+ A D TG T Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARI-ADPEHDHTGFLTEXVATRWY 213
Query: 274 MAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
APE+ L K Y + D++S G L E+ +P + D
Sbjct: 214 RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 40/223 (17%)
Query: 84 DMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+R I G++G+VY R +++ VA+K + + + ++ +EV QK
Sbjct: 58 DLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSY------SGKQSNEKWQDIIKEVRFLQK 110
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L HPN ++ G + TA + EY G L+ +
Sbjct: 111 LRHPNTIQYRGCY-------LREHTAWL-------------VMEYCLGS--ASDLLEVHK 148
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
K L + + +GL+YLHS ++HRDVK N+LL +K+ DFG A + A P
Sbjct: 149 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--P 206
Query: 262 RDMTGETGTLGYMAPEVL----QGKPYNRRCDVYSFGICLWEI 300
+ GT +MAPEV+ +G+ Y+ + DV+S GI E+
Sbjct: 207 ANXF--VGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIEL 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 4/121 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 143 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 199
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVV 320
+M G T Y APE+ L YN+ D++S G + E+ +P D ++
Sbjct: 200 DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 259
Query: 321 R 321
R
Sbjct: 260 R 260
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 83 LDMRNLIAQGTYGSV--YRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQ 140
LD I +G+ G V R + ++VAVK++D + R EV + +
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQR---------RELLFNEVVIMR 97
Query: 141 KLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
H NV + + + L + E+L GG L + + R
Sbjct: 98 DYQHFNVVEMYKSYLVGEELWV--------------------LMEFLQGGALTDIVSQVR 137
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN 260
+ + V + L + L+YLH++ ++HRD+K++++LL +K++DFG AQ
Sbjct: 138 LNEEQIATVCEAVL---QALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFC---AQI 191
Query: 261 PRDMTGE---TGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
+D+ GT +MAPEV+ Y D++S GI + E+ + PY
Sbjct: 192 SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPY 241
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 40/223 (17%)
Query: 84 DMRNLIAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
D+R I G++G+VY R +++ VA+K + + + ++ +EV QK
Sbjct: 19 DLRE-IGHGSFGAVYFARDVRNSEVVAIKKMSY------SGKQSNEKWQDIIKEVRFLQK 71
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L HPN ++ G + TA + EY G L+ +
Sbjct: 72 LRHPNTIQYRGCY-------LREHTAWL-------------VMEYCLGS--ASDLLEVHK 109
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
K L + + +GL+YLHS ++HRDVK N+LL +K+ DFG A + A P
Sbjct: 110 KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA--P 167
Query: 262 RDMTGETGTLGYMAPEVL----QGKPYNRRCDVYSFGICLWEI 300
+ GT +MAPEV+ +G+ Y+ + DV+S GI E+
Sbjct: 168 ANXF--VGTPYWMAPEVILAMDEGQ-YDGKVDVWSLGITCIEL 207
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +M G T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +M G T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNP 261
+KL V L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR
Sbjct: 149 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTD 205
Query: 262 RDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
+MTG T Y APE+ L YN D++S G + E+ +P
Sbjct: 206 DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DFG+AR +M G T
Sbjct: 126 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMAGFVATR 182
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 209 VIQLALDLSR----------GLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
VI + LD R G+ +LHS I+HRD+K N+++ S TLKI DFG+AR
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 259 QNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
N MT T Y APEV+ G Y D++S G + E+
Sbjct: 178 TNFM-MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 190 GNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENMLLDSQRTLKI 248
G + L + + + +I+ ++ + + + L YL K ++HRDVK N+LLD + +K+
Sbjct: 107 GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKL 166
Query: 249 ADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQ----GKP-YNRRCDVYSFGICLWEIYC 302
DFG++ R+ +D + G YMAPE + KP Y+ R DV+S GI L E+
Sbjct: 167 CDFGISGRLVDDKAKDRS--AGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELAT 224
Query: 303 CDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSS--LANIMRKCWDANAEKRPEMGEVVK 359
PY + V Q P +P S + ++ C + KRP+ ++++
Sbjct: 225 GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 108/235 (45%), Gaps = 33/235 (14%)
Query: 82 KLDMRNLIAQGTYGSVYRGTY--DNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVW 139
K D +++I +G V R + E AVK+++ + + + + +R + ++E +
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL-SPEQLEEVREATRRETHIL 153
Query: 140 QKL-DHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
+++ HP++ + + +S + + + + G L YL
Sbjct: 154 RQVAGHPHIITLIDSYESSSFMFL--------------------VFDLMRKGELFDYL-- 191
Query: 199 NRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEA 258
+ L+ K + L +S+LH+ IVHRD+K EN+LLD ++++DFG +
Sbjct: 192 TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS-CHL 250
Query: 259 QNPRDMTGETGTLGYMAPEVL-----QGKP-YNRRCDVYSFGICLWEIYCCDMPY 307
+ + GT GY+APE+L + P Y + D+++ G+ L+ + P+
Sbjct: 251 EPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI FG+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 7/158 (4%)
Query: 208 IVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
I+ ++A+ + + L +LHSK ++HRDVK N+L+++ +K+ DFG++ + T
Sbjct: 154 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-TI 212
Query: 267 ETGTLGYMAPE----VLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQ 322
+ G YMAPE L K Y+ + D++S GI + E+ PY V +
Sbjct: 213 DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 272
Query: 323 NLRPEIPR-CCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P++P + + +C N+++RP E+++
Sbjct: 273 EPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 220 LSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDM-TGETGTLGYMA 275
+++ H IVHRD+K EN+LL S+ +K+ADFG+A +E Q + G GT GY++
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PE 327
PEVL+ PY + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL---YILLVGYP--PFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 328 IPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCF 382
P + +++ K N KR E +K S M+ + C
Sbjct: 230 WDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 82/175 (46%), Gaps = 19/175 (10%)
Query: 220 LSYLHSKKIVHRDVKTENMLLDSQR---TLKIADFGVARVEAQNPRDM-TGETGTLGYMA 275
+++ H IVHRD+K EN+LL S+ +K+ADFG+A +E Q + G GT GY++
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLS 174
Query: 276 PEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PE 327
PEVL+ PY + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL---YILLVGYP--PFWDEDQHRLYQQIKAGAYDFPSPE 229
Query: 328 IPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCF 382
P + +++ K N KR E +K S M+ + C
Sbjct: 230 WDTVTPEA-KDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCL 283
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 31/231 (13%)
Query: 84 DMRNLIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ +I +G + V R Q+ AVK++D + T+ ++E ++
Sbjct: 29 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK----FTSSPGLSTEDLKREASICHM 84
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L HP++ + + +T S DG E++ G +L +++
Sbjct: 85 LKHPHIVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRAD 124
Query: 202 KKLALK--IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARV 256
+ + L Y H I+HRDVK +LL S+ +K+ FGVA
Sbjct: 125 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 184
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
++ G GT +MAPEV++ +PY + DV+ G+ L+ + +P+
Sbjct: 185 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ- 243
E + GG L ++R +K + + + +++ + YLH++ +VHRD+K N+L +
Sbjct: 96 ELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 244 ---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE 299
+++I DFG A+ + A+N MT T ++APEVL+ + Y+ CD++S G+ L+
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212
Query: 300 IYCCDMPYPD 309
+ P+ +
Sbjct: 213 MLTGYTPFAN 222
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI DF +AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 64 WSRNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE--VAVKLLDWGEDGMAT 121
W++ +Q KE ++ ++ +I +G +G V N E A+K+L+ E M
Sbjct: 74 WAKPFTQLVKE-MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--MLK 130
Query: 122 TAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXX 181
AETA F++E V D +T A ++L +
Sbjct: 131 RAETAC----FREERDVLVNGDCQWITALHYAFQDENHLYL------------------- 167
Query: 182 XXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+Y GG+L L+ KL + ++ + +H VHRD+K +N+LLD
Sbjct: 168 -VMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 225
Query: 242 SQRTLKIADFG-VARVEAQNPRDMTGETGTLGYMAPEVLQGKP-----YNRRCDVYSFGI 295
+++ADFG ++ + GT Y++PE+LQ Y CD +S G+
Sbjct: 226 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 285
Query: 296 CLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIP 329
C++E+ + P+ S + ++ R + P
Sbjct: 286 CMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 36/274 (13%)
Query: 64 WSRNESQRPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE--VAVKLLDWGEDGMAT 121
W++ +Q KE ++ ++ +I +G +G V N E A+K+L+ E M
Sbjct: 58 WAKPFTQLVKE-MQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE--MLK 114
Query: 122 TAETAALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXX 181
AETA F++E V D +T A ++L +
Sbjct: 115 RAETAC----FREERDVLVNGDCQWITALHYAFQDENHLYL------------------- 151
Query: 182 XXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLD 241
+Y GG+L L+ KL + ++ + +H VHRD+K +N+LLD
Sbjct: 152 -VMDYYVGGDLLT-LLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD 209
Query: 242 SQRTLKIADFG-VARVEAQNPRDMTGETGTLGYMAPEVLQGKP-----YNRRCDVYSFGI 295
+++ADFG ++ + GT Y++PE+LQ Y CD +S G+
Sbjct: 210 VNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 269
Query: 296 CLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIP 329
C++E+ + P+ S + ++ R + P
Sbjct: 270 CMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 82/159 (51%), Gaps = 9/159 (5%)
Query: 208 IVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN-PRDMT 265
I+ ++A+ + + L +LHSK ++HRDVK N+L+++ +K+ DFG++ + +D+
Sbjct: 110 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI- 168
Query: 266 GETGTLGYMAPE----VLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
+ G YMAPE L K Y+ + D++S GI + E+ PY V
Sbjct: 169 -DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 322 QNLRPEIPR-CCPSSLANIMRKCWDANAEKRPEMGEVVK 359
+ P++P + + +C N+++RP E+++
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI D G+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
+Y+ GG L +L ++R++ V ++ L +LH I++RD+K EN+LLDS
Sbjct: 139 DYINGGELFTHL--SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNG 196
Query: 245 TLKIADFGVARV----EAQNPRDMTGETGTLGYMAPEVLQG--KPYNRRCDVYSFGICLW 298
+ + DFG+++ E + D GT+ YMAP++++G +++ D +S G+ ++
Sbjct: 197 HVVLTDFGLSKEFVADETERAYDF---CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMY 253
Query: 299 EIYCCDMPYPDLSFADVSSAVVRQNLRPEIP 329
E+ P+ + + + R+ L+ E P
Sbjct: 254 ELLTGASPFTVDGEKNSQAEISRRILKSEPP 284
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 98/231 (42%), Gaps = 31/231 (13%)
Query: 84 DMRNLIAQGTYGSVYR--GTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQK 141
++ +I +G + V R Q+ AVK++D + T+ ++E ++
Sbjct: 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAK----FTSSPGLSTEDLKREASICHM 82
Query: 142 LDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRR 201
L HP++ + + +T S DG E++ G +L +++
Sbjct: 83 LKHPHIVELL-------------ETYSSDG-------MLYMVFEFMDGADLCFEIVKRAD 122
Query: 202 KKLALK--IVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGVARV 256
+ + L Y H I+HRDVK +LL S+ +K+ FGVA
Sbjct: 123 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182
Query: 257 EAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
++ G GT +MAPEV++ +PY + DV+ G+ L+ + +P+
Sbjct: 183 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
I + + L L+ V L RGL Y+HS +++HRD+K N+L++ LKI DFG+AR
Sbjct: 149 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 208
Query: 257 EAQNPRD----MTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
+P + MT T Y APE+ L Y + D++S G E+ +P
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 265
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 2/123 (1%)
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKI 248
G L + +R +L + + L + YL K I+HRD+K EN+++ T+K+
Sbjct: 112 GSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKL 171
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPY-NRRCDVYSFGICLWEIYCCDMPY 307
DFG A + T GT+ Y APEVL G PY +++S G+ L+ + + P+
Sbjct: 172 IDFGSAAYLERGKLFYTF-CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Query: 308 PDL 310
+L
Sbjct: 231 CEL 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 197 IRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV 256
I + + L L+ V L RGL Y+HS +++HRD+K N+L++ LKI DFG+AR
Sbjct: 148 IIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARG 207
Query: 257 EAQNPRD----MTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
+P + MT T Y APE+ L Y + D++S G E+ +P
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ----RTLK 247
L+Q R L + + + YLHS+ +VHRD+K N+L + L+
Sbjct: 113 LRQKFFSEREASFVLHTI-------GKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 248 IADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMP 306
I DFG A+ + A+N MT T ++APEVL+ + Y+ CD++S GI L+ + P
Sbjct: 166 ICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 307 YPD 309
+ +
Sbjct: 225 FAN 227
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI D G+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + +GL Y+HS +VHRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 131 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTR 187
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR--------- 321
Y APEV L YN+ D++S G + E+ + + D + +++
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247
Query: 322 -QNLRPEIPRCCPSSLANIMRKCW-DANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQAT 379
Q L + + SL RK + P+ ++++ + +D K + QA
Sbjct: 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK---RLTAAQAL 304
Query: 380 GCFCFSPVRGP 390
F P R P
Sbjct: 305 THPFFEPFRDP 315
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 55/106 (51%), Gaps = 1/106 (0%)
Query: 204 LALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
L ++V + + G+ + HS I+HRD+K EN+L+ +K+ DFG AR A
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 264 MTGETGTLGYMAPEVLQGK-PYNRRCDVYSFGICLWEIYCCDMPYP 308
E T Y APE+L G Y + DV++ G + E++ + +P
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + RGL Y+HS I+HRD+K N+ ++ LKI D G+AR +MTG T
Sbjct: 130 LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDEMTGYVATR 186
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
Y APE+ L YN+ D++S G + E+ +P D ++R
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 212 LALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTL 271
L + +GL Y+HS +VHRD+K N+ ++ LKI DFG+AR +MTG T
Sbjct: 149 LVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYVVTR 205
Query: 272 GYMAPEV-LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR--------- 321
Y APEV L YN+ D++S G + E+ + + D + +++
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 265
Query: 322 -QNLRPEIPRCCPSSLANIMRKCW-DANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQAT 379
Q L + + SL RK + P+ ++++ + +D K + QA
Sbjct: 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK---RLTAAQAL 322
Query: 380 GCFCFSPVRGP 390
F P R P
Sbjct: 323 THPFFEPFRDP 333
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET--GTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K ++ D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV + +++ HPN+ T + +KT V E +
Sbjct: 73 REEIEREVNILREIRHPNII--------TLHDIFENKTDVV------------LILELVS 112
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQR--- 244
GG L +L ++ L Q + G+ YLHSK+I H D+K EN MLLD
Sbjct: 113 GGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 170
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ DFG+A ++EA N + GT ++APE++ +P D++S G+ + +
Sbjct: 171 RIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 228
Query: 304 DMPY 307
P+
Sbjct: 229 ASPF 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 63/123 (51%), Gaps = 13/123 (10%)
Query: 192 LKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ----RTLK 247
L+Q R L + + + YLHS+ +VHRD+K N+L + L+
Sbjct: 113 LRQKFFSEREASFVLHTI-------GKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLR 165
Query: 248 IADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMP 306
I DFG A+ + A+N MT T ++APEVL+ + Y+ CD++S GI L+ + P
Sbjct: 166 ICDFGFAKQLRAENGLLMT-PCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
Query: 307 YPD 309
+ +
Sbjct: 225 FAN 227
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV + +++ HPN+ T + +KT V E +
Sbjct: 52 REEIEREVNILREIRHPNII--------TLHDIFENKTDVV------------LILELVS 91
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQR--- 244
GG L +L ++ L Q + G+ YLHSK+I H D+K EN MLLD
Sbjct: 92 GGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 149
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ DFG+A ++EA N + GT ++APE++ +P D++S G+ + +
Sbjct: 150 RIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 207
Query: 304 DMPY 307
P+
Sbjct: 208 ASPF 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV + +++ HPN+ T + +KT V E +
Sbjct: 59 REEIEREVNILREIRHPNII--------TLHDIFENKTDVV------------LILELVS 98
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQR--- 244
GG L +L ++ L Q + G+ YLHSK+I H D+K EN MLLD
Sbjct: 99 GGELFDFL--AEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNP 156
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+K+ DFG+A ++EA N + GT ++APE++ +P D++S G+ + +
Sbjct: 157 RIKLIDFGIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 214
Query: 304 DMPY 307
P+
Sbjct: 215 ASPF 218
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 21/131 (16%)
Query: 185 EYLPGGNLKQYLIRNRR-KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
E + GG++ ++ + R +L +V+Q D++ L +LH+K I HRD+K EN+L +
Sbjct: 91 EKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 244 RT---LKIADFGVARVEAQN--------PRDMTGETGTLGYMAPEVL-----QGKPYNRR 287
+KI DFG+ N P +T G+ YMAPEV+ + Y++R
Sbjct: 148 NQVSPVKICDFGLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 288 CDVYSFGICLW 298
CD++S G+ L+
Sbjct: 207 CDLWSLGVILY 217
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 205 ALKIVIQLALDLSRGLSYLHSKK-IVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD 263
+K +I+ L+ SY+H++K I HRDVK N+L+D +K++DFG + E +
Sbjct: 152 VIKCIIKSVLN---SFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGES--EYMVDKK 206
Query: 264 MTGETGTLGYMAPEVLQGK-PYN-RRCDVYSFGICLWEIYCCDMPYP-DLSFADVSSAVV 320
+ G GT +M PE + YN + D++S GICL+ ++ +P+ +S ++ + +
Sbjct: 207 IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIR 266
Query: 321 RQNLRPEIPR 330
+N+ + R
Sbjct: 267 TKNIEYPLDR 276
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 23/167 (13%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E L GG++ ++ ++K + ++ D++ L +LH+K I HRD+K EN+L +S
Sbjct: 91 EKLQGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPE 148
Query: 245 T---LKIADF----GVARVEAQNP---RDMTGETGTLGYMAPEVL-----QGKPYNRRCD 289
+KI DF G+ + P ++T G+ YMAPEV+ Q Y++RCD
Sbjct: 149 KVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCD 208
Query: 290 VYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSL 336
++S G+ L+ + P+ AD R E+ R C + L
Sbjct: 209 LWSLGVVLYIMLSGYPPFVGHCGADCGWD------RGEVCRVCQNKL 249
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 213 ALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTL 271
A ++ GL ++H++ +V+RD+K N+LLD ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 272 GYMAPEVLQ-GKPYNRRCDVYSFGICLWEIYCCDMPY 307
GYMAPEVLQ G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 213 ALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTL 271
A ++ GL ++H++ +V+RD+K N+LLD ++I+D G+A + P GT
Sbjct: 297 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 353
Query: 272 GYMAPEVLQ-GKPYNRRCDVYSFGICLWEIYCCDMPY 307
GYMAPEVLQ G Y+ D +S G L+++ P+
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 213 ALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTL 271
A ++ GL ++H++ +V+RD+K N+LLD ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 272 GYMAPEVLQ-GKPYNRRCDVYSFGICLWEIYCCDMPY 307
GYMAPEVLQ G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 35/255 (13%)
Query: 83 LDMRNLIAQGTYGSVYRGTYDNQE--VAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQ 140
++ +I +G +G V N + A+K+L+ E M AETA F++E V
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRAETAC----FREERDVLV 129
Query: 141 KLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNR 200
D +T A +NL + +Y GG+L L+
Sbjct: 130 NGDSKWITTLHYAFQDDNNLYL--------------------VMDYYVGGDLLT-LLSKF 168
Query: 201 RKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG-VARVEAQ 259
+L ++ ++ + +H VHRD+K +N+L+D +++ADFG ++
Sbjct: 169 EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228
Query: 260 NPRDMTGETGTLGYMAPEVLQGKP-----YNRRCDVYSFGICLWEIYCCDMPYPDLSFAD 314
+ GT Y++PE+LQ Y CD +S G+C++E+ + P+ S +
Sbjct: 229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288
Query: 315 VSSAVVRQNLRPEIP 329
++ R + P
Sbjct: 289 TYGKIMNHKERFQFP 303
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 5/97 (5%)
Query: 213 ALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVA-RVEAQNPRDMTGETGTL 271
A ++ GL ++H++ +V+RD+K N+LLD ++I+D G+A + P GT
Sbjct: 298 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASVGTH 354
Query: 272 GYMAPEVLQ-GKPYNRRCDVYSFGICLWEIYCCDMPY 307
GYMAPEVLQ G Y+ D +S G L+++ P+
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV---EAQNPRDMTGETGTL 271
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V E++ R GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR-ANAFVGTA 196
Query: 272 GYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET--GTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + + GT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 200
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 64/126 (50%), Gaps = 4/126 (3%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
EY GG + + + ++ VI+L + G+ YLH IVH D+K +N+LL S
Sbjct: 109 EYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY 168
Query: 245 TL---KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
L KI DFG++R + + ++ GT Y+APE+L P D+++ GI + +
Sbjct: 169 PLGDIKIVDFGMSR-KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL 227
Query: 302 CCDMPY 307
P+
Sbjct: 228 THTSPF 233
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 222 YLHSKKIVHRDVKTENMLLDSQ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
+ H +VHRD+K EN+LL S+ +K+ADFG+A + G GT GY++PEV
Sbjct: 136 HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 195
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PEIPR 330
L+ PY + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 196 LRKDPYGKPVDLWACGVIL---YILLVGYP--PFWDEDQHRLYQQIKAGAYDFPSPEWDT 250
Query: 331 CCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + +++ K N KR E +K
Sbjct: 251 VTPEA-KDLINKMLTINPSKRITAAEALK 278
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 222 YLHSKKIVHRDVKTENMLLDSQ---RTLKIADFGVARVEAQNPRDM-TGETGTLGYMAPE 277
+ H +VHRD+K EN+LL S+ +K+ADFG+A +E Q + G GT GY++PE
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFAGTPGYLSPE 176
Query: 278 VLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PEIP 329
VL+ + Y + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 177 VLRKEAYGKPVDIWACGVIL---YILLVGYP--PFWDEDQHKLYQQIKAGAYDFPSPEWD 231
Query: 330 RCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGGGMIPEDQATGCF 382
P + N++ + N KR E +K S M+ + C
Sbjct: 232 TVTPEA-KNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECL 283
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 143 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 202
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 203 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E++ GG L + + + K++ ++ + +GL ++H VH D+K EN++ ++R
Sbjct: 234 EFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR 292
Query: 245 T--LKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+ LK+ DFG+ A ++ + +T TGT + APEV +GKP D++S G+ + +
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 350
Query: 302 CCDMPY 307
P+
Sbjct: 351 SGLSPF 356
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 60/299 (20%)
Query: 89 IAQGTYGSVYRGT---------YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVW 139
+ QGT+ +++G EV +K+LD + SF + ++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---------ESFFEAASMM 66
Query: 140 QKLDHPNVTKFVGASV-GTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
KL H ++ G V G N+ + E++ G+L YL +
Sbjct: 67 SKLSHKHLVLNYGVCVCGDENILV---------------------QEFVKFGSLDTYLKK 105
Query: 199 NRRKKLALKIV--IQLALDLSRGLSYLHSKKIVHRDVKTENMLL---DSQRT-----LKI 248
N+ + I+ +++A L+ + +L ++H +V +N+LL + ++T +K+
Sbjct: 106 NKN---CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPY 307
+D G++ P+D+ E + ++ PE ++ K N D +SFG LWEI C
Sbjct: 163 SDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--CSGGD 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDT 366
LS D + R ++P + LAN++ C D + RP +++ L ++ T
Sbjct: 217 KPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 138 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 197
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 198 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 141 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 200
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 201 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 199
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 200 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 60/262 (22%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQE---VAVK-LLDWGEDGMATTAETA 126
RP +W+I + ++R+LI G+YG V YD E VA+K +L ED +
Sbjct: 44 RPHSDWQIP-DRYEIRHLIGTGSYGHVCEA-YDKLEKRVVAIKKILRVFEDLIDC----- 96
Query: 127 ALRSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEY 186
+E+A+ +L+H +V K + ++ IP D ++
Sbjct: 97 ---KRILREIAILNRLNHDHVVKVL-------DIVIPKDVEKFD---ELYVVLEIADSDF 143
Query: 187 LPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTL 246
YL K L +++ G+ Y+HS I+HRD+K N L++ ++
Sbjct: 144 KKLFRTPVYLTELHIKTLLYNLLV--------GVKYVHSAGILHRDLKPANCLVNQDCSV 195
Query: 247 KIADFGVARV-------EAQNP--------------------RDMTGETGTLGYMAPE-V 278
K+ DFG+AR +Q P R +TG T Y APE +
Sbjct: 196 KVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELI 255
Query: 279 LQGKPYNRRCDVYSFGICLWEI 300
L + Y DV+S G E+
Sbjct: 256 LLQENYTEAIDVWSIGCIFAEL 277
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET--GTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + + GT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQ 196
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 145 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 204
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 205 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 177
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 178 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR 244
E++ GG L + + + K++ ++ + +GL ++H VH D+K EN++ ++R
Sbjct: 128 EFMSGGELFE-KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR 186
Query: 245 T--LKIADFGV-ARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIY 301
+ LK+ DFG+ A ++ + +T TGT + APEV +GKP D++S G+ + +
Sbjct: 187 SNELKLIDFGLTAHLDPKQSVKVT--TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 244
Query: 302 CCDMPY 307
P+
Sbjct: 245 SGLSPF 250
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 122 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 181
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 182 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 117 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 176
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 177 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 175
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 176 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 115 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 174
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 175 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD-HPNVTKFVGASVGTSNLKIP 163
+E AVK++D G + E LR + +EV + +K+ HPN+ + LK
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ----------LKDT 92
Query: 164 SKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYL 223
+T + + + G L YL + L+ K ++ L + L
Sbjct: 93 YETNTF----------FFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 224 HSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQ--- 280
H IVHRD+K EN+LLD +K+ DFG + + + GT Y+APE+++
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRSVCGTPSYLAPEIIECSM 199
Query: 281 --GKP-YNRRCDVYSFGICLWEIYCCDMPY 307
P Y + D++S G+ ++ + P+
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 215 DLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGE--TGTLG 272
++ L YLH K I+HRD+K EN+LL+ ++I DFG A+V + + GT
Sbjct: 137 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQ 196
Query: 273 YMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPY 307
Y++PE+L K + D+++ G ++++ P+
Sbjct: 197 YVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFG-----VARVE----AQ 259
++ L L + RGL +H+K HRD+K N+LL + + D G VE A
Sbjct: 136 ILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQAL 195
Query: 260 NPRDMTGETGTLGYMAPEVLQGKPY---NRRCDVYSFGICLWEIYCCDMPYPDLSFA--- 313
+D + T+ Y APE+ + + + R DV+S G L+ + + PY D+ F
Sbjct: 196 TLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-DMVFQKGD 254
Query: 314 DVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDTSKGG 370
V+ AV Q P+ PR S+L ++ + +RP + ++ LEA+ G
Sbjct: 255 SVALAVQNQLSIPQSPRHS-SALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 30/210 (14%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD-HPNVTKFVGASVGTSNLKIP 163
+E AVK++D G + E LR + +EV + +K+ HPN+ + LK
Sbjct: 30 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ----------LKDT 79
Query: 164 SKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYL 223
+T + + + G L YL + L+ K ++ L + L
Sbjct: 80 YETNTF----------FFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 127
Query: 224 HSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQ--- 280
H IVHRD+K EN+LLD +K+ DFG + + + GT Y+APE+++
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCGTPSYLAPEIIECSM 186
Query: 281 --GKP-YNRRCDVYSFGICLWEIYCCDMPY 307
P Y + D++S G+ ++ + P+
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 95/211 (45%), Gaps = 32/211 (15%)
Query: 105 QEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLD-HPNVTKFVGASVGTSNLKIP 163
+E AVK++D G + E LR + +EV + +K+ HPN+ + LK
Sbjct: 43 KEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQ----------LKDT 92
Query: 164 SKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYL 223
+T + + + G L YL + L+ K ++ L + L
Sbjct: 93 YETNTF----------FFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 224 HSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET-GTLGYMAPEVLQ-- 280
H IVHRD+K EN+LLD +K+ DFG + +P + E GT Y+APE+++
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSC--QLDPGEKLREVCGTPSYLAPEIIECS 198
Query: 281 ---GKP-YNRRCDVYSFGICLWEIYCCDMPY 307
P Y + D++S G+ ++ + P+
Sbjct: 199 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 220 LSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVL 279
L++LHS+ +VH DVK N+ L + K+ DFG+ VE + G YMAPE+L
Sbjct: 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLL-VELGTAGAGEVQEGDPRYMAPELL 228
Query: 280 QGKPYNRRCDVYSFGICLWEIYCCDMPYPD 309
QG Y DV+S G+ + E+ C+M P
Sbjct: 229 QGS-YGTAADVFSLGLTILEV-ACNMELPH 256
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD----------MTGE 267
R + LH ++HRD+K N+L++S LK+ DFG+AR+ ++ D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEX 182
Query: 268 TGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIY 301
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 17/149 (11%)
Query: 222 YLHSKKIVHRDVKTENMLLDSQ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEV 278
+ H +VHR++K EN+LL S+ +K+ADFG+A + G GT GY++PEV
Sbjct: 125 HCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEV 184
Query: 279 LQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR--------PEIPR 330
L+ PY + D+++ G+ L Y + YP F D + Q ++ PE
Sbjct: 185 LRKDPYGKPVDLWACGVIL---YILLVGYP--PFWDEDQHRLYQQIKAGAYDFPSPEWDT 239
Query: 331 CCPSSLANIMRKCWDANAEKRPEMGEVVK 359
P + +++ K N KR E +K
Sbjct: 240 VTPEA-KDLINKMLTINPSKRITAAEALK 267
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%), Gaps = 21/131 (16%)
Query: 185 EYLPGGNLKQYLIRNRR-KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ 243
E + GG++ ++ + R +L +V+Q D++ L +LH+K I HRD+K EN+L +
Sbjct: 91 EKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGIAHRDLKPENILCEHP 147
Query: 244 RT---LKIADFGVARVEAQN--------PRDMTGETGTLGYMAPEVL-----QGKPYNRR 287
+KI DF + N P +T G+ YMAPEV+ + Y++R
Sbjct: 148 NQVSPVKICDFDLGSGIKLNGDCSPISTPELLT-PCGSAEYMAPEVVEAFSEEASIYDKR 206
Query: 288 CDVYSFGICLW 298
CD++S G+ L+
Sbjct: 207 CDLWSLGVILY 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQ- 243
E GG L ++R +K + + + +++ + YLH++ +VHRD+K N+L +
Sbjct: 96 ELXKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES 153
Query: 244 ---RTLKIADFGVAR-VEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWE 299
+++I DFG A+ + A+N T T ++APEVL+ + Y+ CD++S G+ L+
Sbjct: 154 GNPESIRICDFGFAKQLRAENGLLXT-PCYTANFVAPEVLERQGYDAACDIWSLGVLLYT 212
Query: 300 IYCCDMPYPD 309
P+ +
Sbjct: 213 XLTGYTPFAN 222
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 11/95 (11%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRD----------MTGE 267
R + LH ++HRD+K N+L++S LK+ DFG+AR+ ++ D MT
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEY 182
Query: 268 TGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIY 301
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 60/299 (20%)
Query: 89 IAQGTYGSVYRGT---------YDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVW 139
+ QGT+ +++G EV +K+LD + SF + ++
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYS---------ESFFEAASMM 66
Query: 140 QKLDHPNVTKFVGASV-GTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIR 198
KL H ++ G G N+ + E++ G+L YL +
Sbjct: 67 SKLSHKHLVLNYGVCFCGDENILV---------------------QEFVKFGSLDTYLKK 105
Query: 199 NRRKKLALKIV--IQLALDLSRGLSYLHSKKIVHRDVKTENMLL---DSQRT-----LKI 248
N+ + I+ +++A L+ + +L ++H +V +N+LL + ++T +K+
Sbjct: 106 NKN---CINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKL 162
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPY 307
+D G++ P+D+ E + ++ PE ++ K N D +SFG LWEI C
Sbjct: 163 SDPGISITVL--PKDILQER--IPWVPPECIENPKNLNLATDKWSFGTTLWEI--CSGGD 216
Query: 308 PDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEVVKMLEAIDT 366
LS D + R ++P + LAN++ C D + RP +++ L ++ T
Sbjct: 217 KPLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 27/183 (14%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPN+ +++ + E +
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVL--------------------ILELVS 98
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ---R 244
GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 99 GGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIP 156
Query: 245 TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCD 304
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 157 HIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA 215
Query: 305 MPY 307
P+
Sbjct: 216 SPF 218
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + ++
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKA 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDS-QRTL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 218 RGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGETG-------- 269
R + LH ++HRD+K N+L++S LK+ DFG+AR+ ++ D + TG
Sbjct: 123 RAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEF 182
Query: 270 --TLGYMAPEV-LQGKPYNRRCDVYSFGICLWEIY 301
T Y APEV L Y+R DV+S G L E++
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 10/170 (5%)
Query: 208 IVIQLALDLSRGLSYLHSK-KIVHRDVKTENMLLDSQRTLKIADFGVARVEAQN-PRDMT 265
I+ ++A+ + + L +LHSK ++HRDVK N+L+++ +K DFG++ + +D+
Sbjct: 137 ILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI- 195
Query: 266 GETGTLGYMAPE----VLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVR 321
+ G Y APE L K Y+ + D++S GI E+ PY V
Sbjct: 196 -DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 322 QNLRPEIPR-CCPSSLANIMRKCWDANAEKRPEMGEVVKM-LEAIDTSKG 369
+ P++P + + +C N+++RP E+ + + SKG
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHESKG 304
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 219 GLSYLHSKKIVHRDVKTENMLLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPE 277
+ + HS+ +VHRD+K EN+L+D +R K+ DFG + P T GT Y PE
Sbjct: 151 AIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP--YTDFDGTRVYSPPE 208
Query: 278 VLQGKPYNR-RCDVYSFGICLWEIYCCDMPY--------PDLSF-ADVSSAVVRQNLRPE 327
+ Y+ V+S GI L+++ C D+P+ +L F A VS
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVS----------- 257
Query: 328 IPRCCPSSLANIMRKCWDANAEKRPEMGEVV 358
P CC ++R+C RP + E++
Sbjct: 258 -PDCC-----ALIRRCLAPKPSSRPSLEEIL 282
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ 243
E + GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 95 ELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
Query: 244 ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 153 IPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 301 YCCDMPY 307
P+
Sbjct: 212 LSGASPF 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 200 RRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQ 259
+ +KL + L + +GL Y+H+ I+HRD+K N+ ++ LKI DFG+AR Q
Sbjct: 121 KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---Q 177
Query: 260 NPRDMTGETGTLGYMAPEV-LQGKPYNRRCDVYSFGICLWEI 300
+M G T Y APEV L Y + D++S G + E+
Sbjct: 178 ADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ 243
E + GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 95 ELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
Query: 244 ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 153 IPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 301 YCCDMPY 307
P+
Sbjct: 212 LSGASPF 218
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 112
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 113 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 161
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 162 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 219
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 220 LYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 271
Query: 357 V 357
+
Sbjct: 272 I 272
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ 243
E + GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 95 ELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
Query: 244 ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 153 IPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 301 YCCDMPY 307
P+
Sbjct: 212 LSGASPF 218
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ 243
E + GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 95 ELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
Query: 244 ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 153 IPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 301 YCCDMPY 307
P+
Sbjct: 212 LSGASPF 218
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 111
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 112 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 160
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 161 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 218
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 219 LYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 270
Query: 357 V 357
+
Sbjct: 271 I 271
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + ++
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKA 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 93
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 131
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 132 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 180
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 181 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 238
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 239 LYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 290
Query: 357 V 357
+
Sbjct: 291 I 291
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 7/127 (5%)
Query: 185 EYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDSQ 243
E + GG L +L +++ L+ + + G++YLH+KKI H D+K EN MLLD
Sbjct: 95 ELVSGGELFDFL--AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152
Query: 244 ---RTLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEI 300
+K+ DFG+A E ++ + GT ++APE++ +P D++S G+ + +
Sbjct: 153 IPIPHIKLIDFGLAH-EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 301 YCCDMPY 307
P+
Sbjct: 212 LSGASPF 218
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 139
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 140 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 189 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 246
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 247 LYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 298
Query: 357 V 357
+
Sbjct: 299 I 299
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + ++
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQGKA 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 113/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 92
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 93 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGEL 150
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 151 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + E C +++R C RP E+
Sbjct: 209 PFEHDEEIIRGQVFFRQRVSXE---C-----QHLIRWCLALRPSDRPTFEEI 252
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 124
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 125 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 174 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 231
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 232 LYDMVCGDIPFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 283
Query: 357 V 357
+
Sbjct: 284 I 284
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 125
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 126 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 175 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 232
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 233 LYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 284
Query: 357 V 357
+
Sbjct: 285 I 285
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 124
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 125 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 174 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 231
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 232 LYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 283
Query: 357 V 357
+
Sbjct: 284 I 284
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 124
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 125 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 174 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 231
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 232 LYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 283
Query: 357 V 357
+
Sbjct: 284 I 284
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 112
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 113 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 161
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 162 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 219
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 220 LYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 271
Query: 357 V 357
+
Sbjct: 272 I 272
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 125
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 126 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 175 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 232
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + S +++R C RP E
Sbjct: 233 LYDMVCGDIPFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEE 284
Query: 357 V 357
+
Sbjct: 285 I 285
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 14 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 73
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 111
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 112 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 160
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 161 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 218
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 219 LYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 270
Query: 357 V 357
+
Sbjct: 271 I 271
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 47 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 106
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 144
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 145 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 193
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 194 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 251
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 252 LYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 303
Query: 357 V 357
+
Sbjct: 304 I 304
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 97
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 98 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 156 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 214 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLL-----DSQRTLKIADFGVARV 256
+ +LK V+ +A+ L + Y+HSK +++RDVK EN L+ +Q+ + I DFG+A+
Sbjct: 100 RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAK- 158
Query: 257 EAQNP--------RDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYP 308
E +P R+ TGT YM+ GK +RR D+ + G +P+
Sbjct: 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
Query: 309 DL 310
L
Sbjct: 219 GL 220
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 68 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 96
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 97 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 154
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 155 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 213 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 256
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 15 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 74
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 112
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 113 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 161
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 162 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 219
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 220 LYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHLIRWCLALRPXDRPTFEE 271
Query: 357 V 357
+
Sbjct: 272 I 272
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 57 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 96
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 97 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 154
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 155 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 304 DMPY 307
P+
Sbjct: 213 ASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 57 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 96
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 97 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 154
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 155 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 212
Query: 304 DMPY 307
P+
Sbjct: 213 ASPF 216
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 125
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 126 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 175 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 232
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 233 LYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 284
Query: 357 V 357
+
Sbjct: 285 I 285
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 97
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 98 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 156 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 214 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 257
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 35 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 77
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 78 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 121
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 122 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 181
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 182 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 235
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 28 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 87
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 125
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 126 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 174
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 175 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 232
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 233 LYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 284
Query: 357 V 357
+
Sbjct: 285 I 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 27 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 86
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 124
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 125 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 173
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 174 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 231
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 232 LYDMVCGDIPFEHDEEIIGGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 283
Query: 357 V 357
+
Sbjct: 284 I 284
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 88 LIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPNV 147
+I G++G VY+ KL D GE + + + +E+ + +KLDH N+
Sbjct: 28 VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKRFKNRELQIMRKLDHCNI 76
Query: 148 TK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLA 205
+ + S G K V N +Y+P + +R K+
Sbjct: 77 VRLRYFFYSSG-------EKKDEVYLNLVL---------DYVPETVYRVARHYSRAKQTL 120
Query: 206 LKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TLKIADFGVARVEAQNPRD 263
I ++L + L R L+Y+HS I HRD+K +N+LLD LK+ DFG A+ + +
Sbjct: 121 PVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPN 180
Query: 264 MTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
++ + Y APE++ G Y DV+S G L E+
Sbjct: 181 VS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 44 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 86
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 87 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 130
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 131 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 190
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 191 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 244
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 50 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 92
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 93 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 136
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 196
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 197 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 24 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 66
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 67 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 110
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 111 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 170
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 171 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFL--AEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LIGELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLD---SQR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 66
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 67 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 95
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 96 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 153
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 154 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 212 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 255
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 58/301 (19%)
Query: 72 PKEEWEIDLSKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMAT 121
P +E E S+ + L+ G +GSVY G DN VA+K + DWGE +G
Sbjct: 42 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV 101
Query: 122 TAETAALR---SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXX 178
E L+ S F + + + P+ + L+ P
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI--------LERPE-------------- 139
Query: 179 XXXXXXEYLPGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENM 238
P +L ++ R L ++ + + + H+ ++HRD+K EN+
Sbjct: 140 ---------PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 188
Query: 239 LLDSQR-TLKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGIC 296
L+D R LK+ DFG + T GT Y PE ++ Y+ R V+S GI
Sbjct: 189 LIDLNRGELKLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGIL 246
Query: 297 LWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGE 356
L+++ C D+P+ RQ + E +++R C RP E
Sbjct: 247 LYDMVCGDIPFEHDEEIIRGQVFFRQRVSXEC--------QHLIRWCLALRPSDRPTFEE 298
Query: 357 V 357
+
Sbjct: 299 I 299
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 28 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 70
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 71 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 114
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 115 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 174
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 175 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 92
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 93 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 150
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 151 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 209 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 68
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 69 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 97
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 98 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 156 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 214 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 257
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 28 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 70
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 71 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 114
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 115 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 174
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 175 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 129 RSSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
R ++EV++ +++ HPNV T + +KT + E +
Sbjct: 58 REDIEREVSILKEIQHPNVI--------TLHEVYENKTDVI------------LILELVA 97
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTEN-MLLDS---QR 244
GG L +L ++ L + + + G+ YLHS +I H D+K EN MLLD +
Sbjct: 98 GGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKP 155
Query: 245 TLKIADFGVA-RVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCC 303
+KI DFG+A +++ N + GT ++APE++ +P D++S G+ + +
Sbjct: 156 RIKIIDFGLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
Query: 304 DMPY 307
P+
Sbjct: 214 ASPF 217
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 20 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 62
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 63 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 106
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 107 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 166
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 167 KLCDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 58
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 102
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 103 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 162
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 163 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 29 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 71
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G K V N +Y+P
Sbjct: 72 FKNRELQIMRKLDHCNIVRLRYFFYSSG-------EKKDEVYLNLVL---------DYVP 115
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 116 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 175
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 176 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 50 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 92
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 93 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 136
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 137 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 196
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 197 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 250
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 64 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 92
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 93 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 150
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 151 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 209 PFEHDEEIIGGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 252
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 101/233 (43%), Gaps = 35/233 (15%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 16 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 58
Query: 131 SFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGG 190
+E+ + +KLDH N+ + + +Y+P
Sbjct: 59 FKNRELQIMRKLDHCNIVRL--------------RYFFYSSGEKKDVVYLNLVLDYVPET 104
Query: 191 NLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TLKI 248
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD LK+
Sbjct: 105 VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKL 164
Query: 249 ADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 165 CDFGSAKQLVRGEPNVS-XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 52 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 94
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 95 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 138
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 139 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 198
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 199 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 252
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 54 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 96
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 97 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 140
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 141 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 200
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 201 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 254
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 33/245 (13%)
Query: 89 IAQGTYGSVY--RGTYDNQEVAVKLLDWGEDGMATTAETAALRSSFQQEVAVWQKLDHPN 146
I +G+YG V+ R Q VA+K ED + ALR E+ + ++L HPN
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDD--PVIKKIALR-----EIRMLKQLKHPN 63
Query: 147 VTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLPGGNLKQYLIRNRRKKLAL 206
+ + L + EY L + + ++ +
Sbjct: 64 LVNLLEVFRRKRRLHL--------------------VFEYCDHTVLHE--LDRYQRGVPE 101
Query: 207 KIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTG 266
+V + + +++ H +HRDVK EN+L+ +K+ DFG AR+
Sbjct: 102 HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD 161
Query: 267 ETGTLGYMAPEVLQG-KPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLR 325
E T Y +PE+L G Y DV++ G E+ +P S D ++R+ L
Sbjct: 162 EVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLG 220
Query: 326 PEIPR 330
IPR
Sbjct: 221 DLIPR 225
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 21 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 63
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 64 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 107
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 108 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 167
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 168 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 221
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 113/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 90
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ + L+ P
Sbjct: 91 VSSGFSGVIRLLDWFERPDSFVLI--------LERPE----------------------- 119
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
P +L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 120 PVQDLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 177
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 178 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + E C +++R C RP E+
Sbjct: 236 PFEHDEEIIRGQVFFRQRVSXE---C-----QHLIRWCLALRPSDRPTFEEI 279
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 71 RPKEEWEIDLSKLDMRNLIAQGTYGSVYRGTYDNQEVAVKLLDWGEDGMATTAETAALRS 130
RP+E +S D + +I G++G VY+ KL D GE + + +
Sbjct: 95 RPQE-----VSYTDTK-VIGNGSFGVVYQA---------KLCDSGE--LVAIKKVLQDKR 137
Query: 131 SFQQEVAVWQKLDHPNVTK--FVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYLP 188
+E+ + +KLDH N+ + + S G ++ +Y+P
Sbjct: 138 FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV----------------YLNLVLDYVP 181
Query: 189 GGNLKQYLIRNRRKKLALKIVIQLAL-DLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+ +R K+ I ++L + L R L+Y+HS I HRD+K +N+LLD L
Sbjct: 182 ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVL 241
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEI 300
K+ DFG A+ + +++ + Y APE++ G Y DV+S G L E+
Sbjct: 242 KLCDFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 295
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGV----- 253
+K +LK V+ LA + + Y+HSK +HRDVK +N L+ + + I DFG+
Sbjct: 100 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159
Query: 254 -ARVEAQNP-RDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
AR P R+ TGT Y + G +RR D+ S G L +P+ L
Sbjct: 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219
Query: 312 FADVSSAVVR---QNLRPEIPRCC---PSSLANIMRKCWDANAEKRPEMGEVVKMLEAID 365
A R + + I C PS A + C + +P+ + ++ +
Sbjct: 220 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279
Query: 366 TSKG 369
+G
Sbjct: 280 HRQG 283
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 16/184 (8%)
Query: 202 KKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQRT---LKIADFGV----- 253
+K +LK V+ LA + + Y+HSK +HRDVK +N L+ + + I DFG+
Sbjct: 98 RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 157
Query: 254 -ARVEAQNP-RDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLS 311
AR P R+ TGT Y + G +RR D+ S G L +P+ L
Sbjct: 158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 217
Query: 312 FADVSSAVVR---QNLRPEIPRCC---PSSLANIMRKCWDANAEKRPEMGEVVKMLEAID 365
A R + + I C PS A + C + +P+ + ++ +
Sbjct: 218 AATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 277
Query: 366 TSKG 369
+G
Sbjct: 278 HRQG 281
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARVEAQNPRDMTGET--GTLGY 273
L GL YLHS+ IVH+D+K N+LL + TLKI+ GVA D T T G+ +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 274 MAPEVLQG--KPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSSAVVRQNLRPEIPRC 331
PE+ G + D++S G+ L+ I P+ + + + + + IP
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY--AIPGD 235
Query: 332 CPSSLANIMRKCWDANAEKR 351
C L+++++ + KR
Sbjct: 236 CGPPLSDLLKGMLEYEPAKR 255
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 22/115 (19%)
Query: 216 LSRGLSYLHSKKIVHRDVKTENMLLDSQRTLKIADFGVARV-----------------EA 258
L + + YLHS ++HRD+K N+LL+++ +K+ADFG++R
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 259 QNPRD----MTGETGTLGYMAPEVLQGKP-YNRRCDVYSFGICLWEIYCCDMPYP 308
+N D +T T Y APE+L G Y + D++S G L EI C +P
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 13/133 (9%)
Query: 209 VIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR--TLKIADFGVA---------RVE 257
V+QL + + L Y+H + VH D+K N+LL + + +AD+G++ +
Sbjct: 153 VLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY 212
Query: 258 AQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYPDLSFADVSS 317
+NPR G GT+ + + + +G +RR DV G C+ C +P+ V+
Sbjct: 213 QENPR--KGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270
Query: 318 AVVRQNLRPEIPR 330
+ NL E+P+
Sbjct: 271 QTAKTNLLDELPQ 283
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 112/292 (38%), Gaps = 58/292 (19%)
Query: 81 SKLDMRNLIAQGTYGSVYRG--TYDNQEVAVK------LLDWGE--DGMATTAETAALR- 129
S+ + L+ G +GSVY G DN VA+K + DWGE +G E L+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 67
Query: 130 --SSFQQEVAVWQKLDHPNVTKFVGASVGTSNLKIPSKTASVDGNXXXXXXXXXXXXEYL 187
S F + + + P+ S + I + V
Sbjct: 68 VSSGFSGVIRLLDWFERPD-----------SFVLILERMEPVQ----------------- 99
Query: 188 PGGNLKQYLIRNRRKKLALKIVIQLALDLSRGLSYLHSKKIVHRDVKTENMLLDSQR-TL 246
+L ++ R L ++ + + + H+ ++HRD+K EN+L+D R L
Sbjct: 100 ---DLFDFI--TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 154
Query: 247 KIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYN-RRCDVYSFGICLWEIYCCDM 305
K+ DFG + T GT Y PE ++ Y+ R V+S GI L+++ C D+
Sbjct: 155 KLIDFGSGALLKDTV--YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 306 PYPDLSFADVSSAVVRQNLRPEIPRCCPSSLANIMRKCWDANAEKRPEMGEV 357
P+ RQ + S +++R C RP E+
Sbjct: 213 PFEHDEEIIRGQVFFRQRVS--------SECQHLIRWCLALRPSDRPTFEEI 256
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,306,701
Number of Sequences: 62578
Number of extensions: 453470
Number of successful extensions: 3950
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1080
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 964
Number of HSP's gapped (non-prelim): 1321
length of query: 390
length of database: 14,973,337
effective HSP length: 101
effective length of query: 289
effective length of database: 8,652,959
effective search space: 2500705151
effective search space used: 2500705151
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)