Your job contains 1 sequence.
>036387
MGSSLRLSEPMMLVKPSLSSLFAPRLNRTNAQAQQPRFISTSRACSLPSSDSSSSSSSSS
SSSSSLNRRQFVSQTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDI
AFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVG
KPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGG
GLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREK
AADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 036387
(334 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2178262 - symbol:HCF136 "HIGH CHLOROPHYLL FLUO... 560 4.5e-111 3
UNIPROTKB|Q480K3 - symbol:CPS_2804 "BNR repeat protein" s... 129 1.0e-05 1
TIGR_CMR|CPS_2804 - symbol:CPS_2804 "BNR repeat protein" ... 129 1.0e-05 1
>TAIR|locus:2178262 [details] [associations]
symbol:HCF136 "HIGH CHLOROPHYLL FLUORESCENCE 136"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0030095 "chloroplast photosystem II"
evidence=ISS] [GO:0009543 "chloroplast thylakoid lumen"
evidence=ISS;IDA] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009579 "thylakoid" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=IMP] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP;RCA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009657 "plastid organization" evidence=IMP;RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010114
"response to red light" evidence=RCA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0016117 "carotenoid
biosynthetic process" evidence=RCA] [GO:0034660 "ncRNA metabolic
process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0009533
"chloroplast stromal thylakoid" evidence=IDA] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046686 GO:GO:0006461 GO:GO:0009941
EMBL:AB006708 GO:GO:0009657 GO:GO:0009535 GO:GO:0031977
GO:GO:0015979 GO:GO:0009523 GO:GO:0009533 EMBL:Y15628 EMBL:AY045691
EMBL:BT004549 EMBL:AK221097 IPI:IPI00539527 PIR:T51828
RefSeq:NP_197703.1 UniGene:At.5360 ProteinModelPortal:O82660
SMR:O82660 IntAct:O82660 STRING:O82660 World-2DPAGE:0003:O82660
PaxDb:O82660 PRIDE:O82660 ProMEX:O82660 EnsemblPlants:AT5G23120.1
GeneID:832376 KEGG:ath:AT5G23120 TAIR:At5g23120 eggNOG:COG4447
HOGENOM:HOG000232521 InParanoid:O82660 OMA:WIAGQPG PhylomeDB:O82660
ProtClustDB:PLN00033 Genevestigator:O82660 GermOnline:AT5G23120
InterPro:IPR016705 PIRSF:PIRSF017875 Uniprot:O82660
Length = 403
Score = 560 (202.2 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 106/144 (73%), Positives = 126/144 (87%)
Query: 67 NRRQFVSQTATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDD 126
+RR+ + Q+A +SLS+S + G PA+++E LS WERV++P+DPGVVLLDIAFVPD+
Sbjct: 54 SRRELLYQSAAVSLSLS--SIVG----PARADEQLSEWERVFLPIDPGVVLLDIAFVPDE 107
Query: 127 LNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILL 186
+ GFLLGTRQTLLETKDGG TW PRSIPSAEEEDFNYRFNSISFKGKEGWI+GKPAILL
Sbjct: 108 PSRGFLLGTRQTLLETKDGGSTWNPRSIPSAEEEDFNYRFNSISFKGKEGWIIGKPAILL 167
Query: 187 HTSDAGESWERIPLSSQLPGDMAF 210
+T+DAGE+W+RIPLSSQLPGDM F
Sbjct: 168 YTADAGENWDRIPLSSQLPGDMVF 191
Score = 522 (188.8 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 98/130 (75%), Positives = 111/130 (85%)
Query: 205 PGDMAFWQPHNRAVARRIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGF 264
PG +WQPHNRAVARRIQNMGWRAD SKGTGITEEFEEVPVQSRGF
Sbjct: 275 PGQ-PYWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSRGF 333
Query: 265 GILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLG 324
GILDVGYRS++EAWAAGGSG+LL+T NGGK+W R+KAADNIAANLY+VKF+++KKGFVLG
Sbjct: 334 GILDVGYRSEEEAWAAGGSGILLRTRNGGKSWNRDKAADNIAANLYAVKFVDDKKGFVLG 393
Query: 325 NDGVLLQYLG 334
NDGVLL+Y+G
Sbjct: 394 NDGVLLRYVG 403
Score = 49 (22.3 bits), Expect = 4.5e-111, Sum P(3) = 4.5e-111
Identities = 23/81 (28%), Positives = 36/81 (44%)
Query: 3 SSLRLSEPMMLVKPSLSSLFAPRLNRTNAQAQQPRFISTSRACSLPXXXXXXXXXXXXXX 62
+SL+L + +L KPS+S F +Q R I +A S P
Sbjct: 2 ASLQLCDGYLLFKPSVSPRFL-------SQRISHRLIP--KASSSPPPSPSPSSSSSSLS 52
Query: 63 XXXLNRRQFVSQTATLSLSIS 83
+RR+ + Q+A +SLS+S
Sbjct: 53 ---FSRRELLYQSAAVSLSLS 70
>UNIPROTKB|Q480K3 [details] [associations]
symbol:CPS_2804 "BNR repeat protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR015943 Gene3D:2.130.10.10 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG4447 RefSeq:YP_269516.1
STRING:Q480K3 GeneID:3518766 KEGG:cps:CPS_2804 PATRIC:21468643
HOGENOM:HOG000221717 OMA:LLPHFNR ProtClustDB:CLSK768081
BioCyc:CPSY167879:GI48-2865-MONOMER Uniprot:Q480K3
Length = 344
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/236 (21%), Positives = 98/236 (41%)
Query: 104 WERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRS-IPSAEEEDF 162
W++ +PV V L ++ F+ + L G+ +G T+L ++DGG W + +P E+ F
Sbjct: 73 WQQANVPVQ--VTLTNVFFLNEQL--GWAVGHDATILHSQDGGLNWQVQQYLPLLEKPLF 128
Query: 163 NYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAV--AR 220
+ F + ++G VG + T+D G +W+ L D + +A A
Sbjct: 129 DIYFKN----PQQGIAVGAYGQVFRTNDGGSTWQNEFHQEILLADDVEYLNELKAEDEAA 184
Query: 221 RIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGF------GILDVGYRSQ 274
+ + + TG+ + ++ + + F +
Sbjct: 185 YLDEITFILPHFNRLVQDGGSLFLLGETGLLAKSDDFGLTWQQFDNFYQGSFFSLARTKT 244
Query: 275 DEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLL 330
AG G + ++ N G W ++ N A L + F N+++ F+LGN+G+LL
Sbjct: 245 GNVLVAGLRGHVFRSLNHGSQW--DEVPTNTTALLNDIVFANDERIFILGNNGMLL 298
>TIGR_CMR|CPS_2804 [details] [associations]
symbol:CPS_2804 "BNR repeat protein" species:167879
"Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR015943 Gene3D:2.130.10.10 EMBL:CP000083
GenomeReviews:CP000083_GR eggNOG:COG4447 RefSeq:YP_269516.1
STRING:Q480K3 GeneID:3518766 KEGG:cps:CPS_2804 PATRIC:21468643
HOGENOM:HOG000221717 OMA:LLPHFNR ProtClustDB:CLSK768081
BioCyc:CPSY167879:GI48-2865-MONOMER Uniprot:Q480K3
Length = 344
Score = 129 (50.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 51/236 (21%), Positives = 98/236 (41%)
Query: 104 WERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRS-IPSAEEEDF 162
W++ +PV V L ++ F+ + L G+ +G T+L ++DGG W + +P E+ F
Sbjct: 73 WQQANVPVQ--VTLTNVFFLNEQL--GWAVGHDATILHSQDGGLNWQVQQYLPLLEKPLF 128
Query: 163 NYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAV--AR 220
+ F + ++G VG + T+D G +W+ L D + +A A
Sbjct: 129 DIYFKN----PQQGIAVGAYGQVFRTNDGGSTWQNEFHQEILLADDVEYLNELKAEDEAA 184
Query: 221 RIQNMGWRADXXXXXXXXXXXXXXSKGTGITEEFEEVPVQSRGF------GILDVGYRSQ 274
+ + + TG+ + ++ + + F +
Sbjct: 185 YLDEITFILPHFNRLVQDGGSLFLLGETGLLAKSDDFGLTWQQFDNFYQGSFFSLARTKT 244
Query: 275 DEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLL 330
AG G + ++ N G W ++ N A L + F N+++ F+LGN+G+LL
Sbjct: 245 GNVLVAGLRGHVFRSLNHGSQW--DEVPTNTTALLNDIVFANDERIFILGNNGMLL 298
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.133 0.398 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 334 303 0.00097 115 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 614 (65 KB)
Total size of DFA: 215 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.29u 0.17s 21.46t Elapsed: 00:00:01
Total cpu time: 21.29u 0.17s 21.46t Elapsed: 00:00:01
Start: Sat May 11 14:05:23 2013 End: Sat May 11 14:05:24 2013