Query 036387
Match_columns 334
No_of_seqs 231 out of 1332
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 21:00:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036387.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036387hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xbg_A YCF48-like protein; pho 100.0 8.5E-31 2.9E-35 246.2 30.9 244 80-334 46-320 (327)
2 2xbg_A YCF48-like protein; pho 100.0 6.3E-30 2.2E-34 240.2 29.5 216 91-332 14-230 (327)
3 3b7f_A Glycosyl hydrolase, BNR 99.9 2.7E-22 9.3E-27 192.3 28.6 244 80-333 67-369 (394)
4 1sqj_A OXG-RCBH, oligoxylogluc 99.9 1.4E-22 4.8E-27 211.2 26.1 238 81-333 28-330 (789)
5 3b7f_A Glycosyl hydrolase, BNR 99.9 2.3E-21 7.7E-26 185.8 29.1 238 81-324 23-297 (394)
6 3a0f_A Xyloglucanase; beta-pro 99.9 1.7E-21 5.7E-26 202.4 26.2 237 82-333 35-342 (763)
7 2cn3_A Xyloglucanase, beta-1,4 99.9 2.9E-20 9.7E-25 192.5 25.6 245 81-333 36-334 (737)
8 1sqj_A OXG-RCBH, oligoxylogluc 99.9 2.7E-20 9.2E-25 194.0 25.5 220 100-333 2-266 (789)
9 3a0f_A Xyloglucanase; beta-pro 99.9 2.3E-20 8E-25 193.8 25.0 217 92-331 519-757 (763)
10 3f6k_A Sortilin; protein sorti 99.9 7.8E-20 2.7E-24 185.9 24.6 208 91-333 64-303 (685)
11 2cn3_A Xyloglucanase, beta-1,4 99.8 2.5E-18 8.5E-23 177.9 26.0 221 100-333 9-280 (737)
12 3f6k_A Sortilin; protein sorti 99.6 3.9E-14 1.3E-18 144.1 20.8 171 92-298 118-311 (685)
13 1w8o_A Bacterial sialidase; 3D 99.4 6.5E-12 2.2E-16 126.7 16.9 219 93-327 54-342 (601)
14 1so7_A Sialidase 2; neuraminid 99.2 1E-10 3.5E-15 111.5 11.3 148 93-253 55-258 (382)
15 2jkb_A Sialidase B; intramolec 99.2 2.5E-09 8.6E-14 109.3 21.2 177 138-326 449-659 (686)
16 3a72_A EXO-arabinanase; arabin 99.0 2.7E-08 9.1E-13 94.1 21.0 201 92-302 52-309 (355)
17 2ydt_A EXO-1,5-alpha-L-arabino 99.0 1.9E-08 6.5E-13 95.5 20.0 221 92-324 57-341 (367)
18 4fj6_A Glycoside hydrolase fam 99.0 7.8E-09 2.7E-13 102.5 17.4 174 138-326 294-505 (523)
19 2jkb_A Sialidase B; intramolec 99.0 3.6E-08 1.2E-12 100.8 20.0 191 92-301 448-668 (686)
20 2bf6_A Sialidase, EXO-alpha-si 98.9 8.8E-09 3E-13 100.4 14.2 184 139-323 191-427 (449)
21 2sli_A Intramolecular trans-si 98.9 1.9E-07 6.7E-12 95.2 23.5 177 139-327 430-651 (679)
22 2xzi_A KDNAse, extracellular s 98.8 1.3E-07 4.4E-12 90.3 17.4 167 138-323 154-352 (386)
23 2w20_A Sialidase A; secreted, 98.8 1E-07 3.5E-12 93.4 17.0 182 139-323 218-446 (471)
24 2ydt_A EXO-1,5-alpha-L-arabino 98.7 8.9E-07 3.1E-11 83.9 18.6 62 138-200 58-138 (367)
25 1w8o_A Bacterial sialidase; 3D 98.7 1.5E-07 5.2E-12 94.6 13.7 157 138-300 54-254 (601)
26 3a72_A EXO-arabinanase; arabin 98.6 1.1E-06 3.8E-11 82.9 17.6 62 138-200 53-133 (355)
27 1so7_A Sialidase 2; neuraminid 98.6 5.7E-08 1.9E-12 92.4 7.8 60 240-300 196-261 (382)
28 2sli_A Intramolecular trans-si 98.6 1.9E-06 6.5E-11 87.9 18.0 106 93-200 429-554 (679)
29 3v9f_A Two-component system se 98.4 0.00025 8.4E-09 73.1 28.6 232 80-333 323-565 (781)
30 2bf6_A Sialidase, EXO-alpha-si 98.4 2.8E-06 9.4E-11 82.7 12.7 60 240-299 253-334 (449)
31 1w0p_A Sialidase; hydrolase, n 98.3 1.3E-06 4.5E-11 90.2 9.7 139 183-325 582-756 (781)
32 3v9f_A Two-component system se 98.3 0.00045 1.6E-08 71.1 28.1 226 80-330 417-651 (781)
33 4fj6_A Glycoside hydrolase fam 98.3 6.2E-06 2.1E-10 81.7 12.7 108 184-300 294-416 (523)
34 1w0p_A Sialidase; hydrolase, n 98.3 2.1E-06 7.1E-11 88.7 9.2 105 93-199 261-409 (781)
35 4a2l_A BT_4663, two-component 98.2 0.0012 4.1E-08 68.1 28.4 233 79-328 272-519 (795)
36 4a2l_A BT_4663, two-component 98.2 0.0019 6.6E-08 66.5 29.7 239 80-333 183-433 (795)
37 2xzi_A KDNAse, extracellular s 97.9 8.1E-05 2.8E-09 70.8 13.0 97 92-199 153-266 (386)
38 2w20_A Sialidase A; secreted, 97.9 6.2E-05 2.1E-09 73.6 12.2 105 94-198 218-364 (471)
39 2qc5_A Streptogramin B lactona 97.5 0.043 1.5E-06 48.0 31.1 222 80-333 30-257 (300)
40 2z2n_A Virginiamycin B lyase; 97.5 0.045 1.5E-06 47.9 30.2 222 80-333 25-252 (299)
41 2z2n_A Virginiamycin B lyase; 97.5 0.049 1.7E-06 47.6 30.6 222 79-333 66-292 (299)
42 3sil_A Sialidase; glycosidase, 97.4 0.00053 1.8E-08 65.1 10.1 56 241-299 205-263 (379)
43 3hxj_A Pyrrolo-quinoline quino 97.4 0.0074 2.5E-07 54.2 17.5 209 80-332 107-320 (330)
44 1rwi_B Serine/threonine-protei 97.4 0.054 1.8E-06 46.9 27.0 221 80-332 34-260 (270)
45 1ms9_A Trans-sialidase; trans- 97.3 0.019 6.5E-07 57.8 20.5 55 184-253 220-278 (648)
46 2qc5_A Streptogramin B lactona 97.3 0.072 2.5E-06 46.6 29.0 222 79-333 71-297 (300)
47 1rwi_B Serine/threonine-protei 97.2 0.058 2E-06 46.7 20.4 189 116-333 25-219 (270)
48 1tl2_A L10, protein (tachylect 97.2 0.0077 2.6E-07 52.7 13.7 152 165-332 42-206 (236)
49 3sil_A Sialidase; glycosidase, 97.2 0.0012 4E-08 62.6 9.1 99 139-253 141-261 (379)
50 1q7f_A NHL, brain tumor CG1071 97.0 0.15 5E-06 44.7 29.7 191 116-331 78-275 (286)
51 1ms9_A Trans-sialidase; trans- 97.0 0.01 3.4E-07 59.9 14.4 59 241-301 220-282 (648)
52 1tl2_A L10, protein (tachylect 97.0 0.0034 1.2E-07 55.0 9.5 106 222-332 43-159 (236)
53 3ott_A Two-component system se 97.0 0.18 6.2E-06 51.4 23.9 201 115-332 232-444 (758)
54 3hxj_A Pyrrolo-quinoline quino 96.9 0.021 7.3E-07 51.1 14.5 101 80-198 30-133 (330)
55 3ott_A Two-component system se 96.9 0.35 1.2E-05 49.2 25.2 216 80-329 32-254 (758)
56 3odt_A Protein DOA1; ubiquitin 96.7 0.29 9.9E-06 42.7 22.8 189 115-333 60-252 (313)
57 3jrp_A Fusion protein of prote 96.5 0.41 1.4E-05 42.9 21.3 193 115-332 12-236 (379)
58 3fm0_A Protein CIAO1; WDR39,SG 96.5 0.47 1.6E-05 43.0 21.1 191 115-332 17-221 (345)
59 1q7f_A NHL, brain tumor CG1071 96.3 0.49 1.7E-05 41.2 24.9 195 116-332 31-234 (286)
60 3dwl_C Actin-related protein 2 96.3 0.45 1.5E-05 43.1 19.2 219 93-332 36-277 (377)
61 2dg1_A DRP35, lactonase; beta 96.3 0.59 2E-05 41.7 27.1 226 80-333 55-313 (333)
62 1k8k_C P40, ARP2/3 complex 41 96.2 0.63 2.2E-05 41.6 25.1 191 115-332 53-270 (372)
63 2ymu_A WD-40 repeat protein; u 96.1 1.1 3.8E-05 43.0 26.2 185 115-333 386-577 (577)
64 3e5z_A Putative gluconolactona 96.0 0.69 2.4E-05 40.6 21.1 206 92-332 50-282 (296)
65 3h6j_A Neuraminidase, sialidas 96.0 0.7 2.4E-05 40.2 20.8 158 134-301 48-224 (438)
66 3e5z_A Putative gluconolactona 95.8 0.91 3.1E-05 39.8 23.8 200 100-333 16-243 (296)
67 3jro_A Fusion protein of prote 95.5 0.81 2.8E-05 46.6 19.1 195 115-332 10-234 (753)
68 1k8k_C P40, ARP2/3 complex 41 95.4 1.3 4.6E-05 39.4 20.2 196 115-332 9-229 (372)
69 4h5i_A Guanine nucleotide-exch 95.3 1.7 5.9E-05 39.7 21.3 65 264-331 270-338 (365)
70 2hes_X YDR267CP; beta-propelle 95.1 1.8 6.2E-05 38.7 21.7 195 115-332 108-324 (330)
71 2dg1_A DRP35, lactonase; beta 94.7 2.1 7.2E-05 37.9 24.7 204 101-333 34-260 (333)
72 4g56_B MGC81050 protein; prote 94.6 2.6 9E-05 38.2 18.2 107 221-332 141-254 (357)
73 3dr2_A Exported gluconolactona 94.4 2.5 8.4E-05 37.4 18.9 185 116-329 87-300 (305)
74 2ymu_A WD-40 repeat protein; u 94.4 3.8 0.00013 39.2 26.4 183 115-332 345-535 (577)
75 1r5m_A SIR4-interacting protei 94.2 3.1 0.00011 37.5 18.9 195 115-332 46-274 (425)
76 3odt_A Protein DOA1; ubiquitin 94.0 2.7 9.2E-05 36.3 25.0 183 115-332 105-292 (313)
77 1zgk_A Kelch-like ECH-associat 93.7 3.5 0.00012 36.5 22.8 201 94-325 41-270 (308)
78 3h6j_A Neuraminidase, sialidas 93.5 1.1 3.8E-05 39.0 11.9 150 92-255 51-222 (438)
79 1pjx_A Dfpase, DIISOPROPYLFLUO 93.3 3.8 0.00013 35.7 22.6 192 117-333 20-253 (314)
80 4aez_A CDC20, WD repeat-contai 93.2 5 0.00017 36.7 25.5 185 115-332 135-332 (401)
81 3g4e_A Regucalcin; six bladed 93.1 4.2 0.00014 35.7 22.7 187 118-333 16-226 (297)
82 1r5m_A SIR4-interacting protei 93.1 4.8 0.00017 36.2 22.9 201 115-332 109-315 (425)
83 1nr0_A Actin interacting prote 92.7 8 0.00027 37.9 21.3 108 221-332 493-607 (611)
84 2woz_A Kelch repeat and BTB do 92.6 5.3 0.00018 35.4 21.7 195 101-326 33-262 (318)
85 3f3f_A Nucleoporin SEH1; struc 92.6 4.7 0.00016 34.8 21.8 90 93-186 36-137 (351)
86 3ii7_A Kelch-like protein 7; p 92.5 5.1 0.00018 35.2 24.5 200 94-325 26-255 (306)
87 3f3f_A Nucleoporin SEH1; struc 92.5 4.9 0.00017 34.8 25.3 199 115-332 12-245 (351)
88 1pjx_A Dfpase, DIISOPROPYLFLUO 92.4 5 0.00017 34.8 25.2 190 116-332 72-295 (314)
89 3mkq_A Coatomer beta'-subunit; 92.4 9.8 0.00033 38.1 24.3 188 115-332 14-213 (814)
90 4e54_B DNA damage-binding prot 92.4 6.9 0.00024 36.3 21.0 194 115-332 120-323 (435)
91 2zwa_A Leucine carboxyl methyl 92.2 5.2 0.00018 40.4 17.1 208 100-327 420-675 (695)
92 2j04_A TAU60, YPL007P, hypothe 92.0 10 0.00036 37.5 19.4 149 165-332 87-250 (588)
93 1gxr_A ESG1, transducin-like e 91.8 6 0.00021 34.3 25.7 183 115-332 142-333 (337)
94 3a9g_A Putative uncharacterize 91.7 2.3 7.7E-05 39.2 12.7 109 224-333 33-175 (354)
95 4g56_B MGC81050 protein; prote 91.6 0.75 2.6E-05 42.0 9.3 110 221-332 44-166 (357)
96 3ow8_A WD repeat-containing pr 91.5 7.2 0.00024 34.7 19.4 105 222-333 209-318 (321)
97 3dwl_C Actin-related protein 2 91.5 7.4 0.00025 34.7 22.6 169 114-297 100-285 (377)
98 1nr0_A Actin interacting prote 91.3 12 0.0004 36.6 23.8 106 221-332 105-217 (611)
99 3dr2_A Exported gluconolactona 91.2 7.3 0.00025 34.2 19.9 187 117-333 47-264 (305)
100 4asc_A Kelch repeat and BTB do 90.8 8.2 0.00028 34.1 22.5 202 94-326 15-252 (315)
101 2pm7_B Protein transport prote 90.7 7.9 0.00027 33.7 21.8 195 115-332 10-234 (297)
102 2vpj_A Kelch-like protein 12; 90.6 8.1 0.00028 33.7 25.3 200 94-325 33-261 (301)
103 1gxr_A ESG1, transducin-like e 90.4 8.1 0.00028 33.4 26.1 185 115-332 98-292 (337)
104 3g4e_A Regucalcin; six bladed 90.1 9.2 0.00031 33.4 25.2 184 115-325 54-261 (297)
105 3zwl_B Eukaryotic translation 89.7 9.8 0.00033 33.3 23.7 189 115-332 33-245 (369)
106 4h5i_A Guanine nucleotide-exch 89.6 12 0.0004 34.0 21.7 96 222-324 136-237 (365)
107 2aq5_A Coronin-1A; WD40 repeat 89.5 12 0.00041 33.9 23.2 198 115-332 82-295 (402)
108 2ghs_A AGR_C_1268P; regucalcin 89.4 11 0.00038 33.5 24.0 185 117-333 51-257 (326)
109 1pgu_A Actin interacting prote 89.4 15 0.00051 35.0 23.5 106 221-332 118-234 (615)
110 2xn4_A Kelch-like protein 2; s 89.3 11 0.00036 33.0 22.0 193 101-325 39-259 (302)
111 2hes_X YDR267CP; beta-propelle 89.2 11 0.00039 33.3 23.6 195 115-332 59-276 (330)
112 3mkq_A Coatomer beta'-subunit; 89.1 19 0.00066 35.8 20.9 188 115-332 56-255 (814)
113 4asc_A Kelch repeat and BTB do 89.0 12 0.00039 33.1 20.1 170 129-325 6-204 (315)
114 2ism_A Putative oxidoreductase 88.3 6.1 0.00021 36.1 12.6 109 224-333 35-175 (352)
115 3bg1_A Protein SEC13 homolog; 88.3 13 0.00044 32.7 19.1 55 277-332 181-243 (316)
116 3ei3_B DNA damage-binding prot 88.1 14 0.00048 33.0 26.0 194 115-332 74-278 (383)
117 2zwa_A Leucine carboxyl methyl 87.9 24 0.00082 35.5 20.0 180 128-325 398-615 (695)
118 3ow8_A WD repeat-containing pr 87.7 14 0.00049 32.6 22.1 104 222-332 167-275 (321)
119 1cru_A Protein (soluble quinop 87.4 6.9 0.00024 37.3 12.8 100 224-323 31-160 (454)
120 4gqb_B Methylosome protein 50; 87.4 16 0.00055 32.9 21.2 190 115-332 83-285 (344)
121 3sfz_A APAF-1, apoptotic pepti 87.0 34 0.0012 36.2 21.6 186 115-332 1004-1203(1249)
122 3sfz_A APAF-1, apoptotic pepti 87.0 18 0.00062 38.3 17.0 185 115-331 962-1153(1249)
123 1zgk_A Kelch-like ECH-associat 86.3 17 0.00057 31.9 20.5 170 128-325 25-223 (308)
124 2woz_A Kelch repeat and BTB do 85.7 18 0.00062 31.8 18.3 170 129-325 17-214 (318)
125 3dw8_B Serine/threonine-protei 85.0 22 0.00076 32.2 20.7 110 221-332 179-311 (447)
126 1pgu_A Actin interacting prote 84.9 27 0.00092 33.1 22.8 105 221-332 490-610 (615)
127 2xzm_R RACK1; ribosome, transl 84.9 20 0.00069 31.7 23.5 190 115-332 119-336 (343)
128 2fp8_A Strictosidine synthase; 84.6 20 0.0007 31.5 18.9 139 166-325 82-247 (322)
129 3qqz_A Putative uncharacterize 84.5 20 0.00069 31.3 25.5 200 115-333 27-250 (255)
130 2uvk_A YJHT; unknown function, 83.8 24 0.00081 31.5 24.6 73 101-181 42-126 (357)
131 3ii7_A Kelch-like protein 7; p 83.7 21 0.00073 31.0 21.1 170 128-325 12-208 (306)
132 3jro_A Fusion protein of prote 83.3 40 0.0014 33.8 22.8 196 115-331 54-280 (753)
133 2vpj_A Kelch-like protein 12; 83.2 22 0.00075 30.8 20.0 159 139-325 33-214 (301)
134 4gqb_B Methylosome protein 50; 82.8 18 0.00062 32.5 12.8 109 221-332 84-197 (344)
135 1got_B GT-beta; complex (GTP-b 82.5 25 0.00087 31.0 23.4 189 115-332 56-253 (340)
136 4ery_A WD repeat-containing pr 82.2 24 0.00081 30.5 25.4 187 115-332 24-219 (312)
137 2xzm_R RACK1; ribosome, transl 80.7 29 0.001 30.6 23.6 63 265-331 215-280 (343)
138 3lrv_A PRE-mRNA-splicing facto 79.7 19 0.00064 31.9 11.6 106 222-332 128-240 (343)
139 2ojh_A Uncharacterized protein 79.7 26 0.00087 29.2 20.4 175 115-323 42-233 (297)
140 1got_B GT-beta; complex (GTP-b 79.2 33 0.0011 30.2 24.5 107 221-332 228-339 (340)
141 2ghs_A AGR_C_1268P; regucalcin 79.2 33 0.0011 30.3 25.5 181 116-325 91-291 (326)
142 2g8s_A Glucose/sorbosone dehyd 79.1 15 0.00051 33.5 10.9 108 224-333 22-170 (353)
143 3fm0_A Protein CIAO1; WDR39,SG 78.3 36 0.0012 30.1 24.5 197 115-332 106-331 (345)
144 3dw8_B Serine/threonine-protei 78.2 39 0.0013 30.5 20.0 68 265-332 287-369 (447)
145 3frx_A Guanine nucleotide-bind 78.0 35 0.0012 29.8 26.5 107 221-332 198-313 (319)
146 2j04_A TAU60, YPL007P, hypothe 77.8 57 0.002 32.2 22.3 190 114-328 85-290 (588)
147 4e54_B DNA damage-binding prot 77.5 20 0.00067 33.1 11.4 109 221-332 121-236 (435)
148 3jrp_A Fusion protein of prote 77.0 37 0.0013 29.6 25.9 196 115-332 56-283 (379)
149 1cru_A Protein (soluble quinop 75.9 54 0.0019 31.0 16.5 146 167-323 30-244 (454)
150 2pbi_B Guanine nucleotide-bind 75.3 44 0.0015 29.7 24.4 106 222-332 243-353 (354)
151 3das_A Putative oxidoreductase 75.0 50 0.0017 30.2 15.7 145 167-324 35-219 (347)
152 2oaj_A Protein SNI1; WD40 repe 74.3 84 0.0029 32.4 22.8 189 115-332 18-238 (902)
153 3fvz_A Peptidyl-glycine alpha- 73.8 46 0.0016 29.2 24.6 144 166-323 93-256 (329)
154 3q7m_A Lipoprotein YFGL, BAMB; 73.2 51 0.0017 29.4 17.3 144 168-332 98-254 (376)
155 1yfq_A Cell cycle arrest prote 72.8 45 0.0016 28.7 22.9 191 115-331 12-220 (342)
156 3dm0_A Maltose-binding peripla 72.7 75 0.0026 31.1 23.1 186 115-330 431-626 (694)
157 4aow_A Guanine nucleotide-bind 72.1 47 0.0016 28.5 20.7 64 265-332 217-282 (340)
158 3dm0_A Maltose-binding peripla 71.3 81 0.0028 30.9 23.3 191 115-332 383-588 (694)
159 1yfq_A Cell cycle arrest prote 70.6 51 0.0017 28.3 14.5 109 221-332 13-127 (342)
160 3vl1_A 26S proteasome regulato 70.4 59 0.002 29.0 24.9 205 115-332 140-361 (420)
161 3a9g_A Putative uncharacterize 70.3 63 0.0021 29.2 19.4 72 116-193 30-115 (354)
162 2p4o_A Hypothetical protein; p 69.6 56 0.0019 28.4 14.7 103 224-333 36-144 (306)
163 3bws_A Protein LP49; two-domai 69.4 64 0.0022 29.0 21.3 175 115-325 170-364 (433)
164 2xn4_A Kelch-like protein 2; s 68.6 57 0.0019 28.1 21.8 193 94-315 79-298 (302)
165 2aq5_A Coronin-1A; WD40 repeat 68.2 60 0.0021 29.1 12.2 109 221-332 133-250 (402)
166 4aow_A Guanine nucleotide-bind 68.0 57 0.002 27.9 24.8 192 115-332 39-242 (340)
167 3sre_A PON1, serum paraoxonase 67.3 76 0.0026 29.0 12.9 62 264-325 112-183 (355)
168 2pm9_A Protein WEB1, protein t 66.9 69 0.0023 28.4 18.7 198 115-332 114-333 (416)
169 2oaj_A Protein SNI1; WD40 repe 66.3 68 0.0023 33.1 13.4 103 221-332 19-125 (902)
170 2fp8_A Strictosidine synthase; 64.2 73 0.0025 27.7 24.5 103 225-332 190-309 (322)
171 3k26_A Polycomb protein EED; W 64.1 70 0.0024 27.5 18.4 195 115-332 19-256 (366)
172 3ei3_B DNA damage-binding prot 64.0 77 0.0026 27.9 24.4 193 115-332 164-378 (383)
173 3das_A Putative oxidoreductase 63.8 88 0.003 28.5 18.0 119 116-250 33-184 (347)
174 1ri6_A Putative isomerase YBHE 63.6 70 0.0024 27.3 21.3 191 116-330 85-302 (343)
175 2uvk_A YJHT; unknown function, 63.5 79 0.0027 27.9 19.8 50 274-325 200-260 (357)
176 3mmy_A MRNA export factor; mRN 63.4 72 0.0025 27.4 24.4 203 98-332 23-243 (368)
177 3qqz_A Putative uncharacterize 63.0 76 0.0026 27.5 20.0 191 81-289 39-249 (255)
178 2ism_A Putative oxidoreductase 63.0 86 0.003 28.2 13.9 142 166-323 33-219 (352)
179 3bg1_A Protein SEC13 homolog; 62.8 70 0.0024 27.7 11.2 108 221-331 15-131 (316)
180 3i2n_A WD repeat-containing pr 62.4 75 0.0026 27.3 19.2 68 265-332 261-349 (357)
181 1ri6_A Putative isomerase YBHE 62.0 74 0.0025 27.1 20.8 193 115-331 38-257 (343)
182 3iz6_a 40S ribosomal protein R 61.7 60 0.002 29.1 10.8 109 222-332 252-371 (380)
183 3vl1_A 26S proteasome regulato 61.6 88 0.003 27.8 26.5 110 221-333 292-416 (420)
184 2xyi_A Probable histone-bindin 60.9 98 0.0034 28.1 14.5 107 221-332 233-349 (430)
185 3frx_A Guanine nucleotide-bind 60.5 84 0.0029 27.2 22.3 59 265-327 198-258 (319)
186 3vgz_A Uncharacterized protein 60.1 83 0.0028 27.0 20.2 106 223-332 144-258 (353)
187 1sq9_A Antiviral protein SKI8; 59.8 91 0.0031 27.4 19.8 108 222-332 189-318 (397)
188 2ynn_A Coatomer subunit beta'; 58.9 86 0.003 26.9 17.3 105 222-332 58-168 (304)
189 3hfq_A Uncharacterized protein 58.8 90 0.0031 27.0 13.1 107 222-330 143-265 (347)
190 2ecf_A Dipeptidyl peptidase IV 58.5 52 0.0018 32.4 10.4 64 266-332 111-177 (741)
191 1l0q_A Surface layer protein; 57.9 99 0.0034 27.2 22.3 181 116-332 75-271 (391)
192 3k26_A Polycomb protein EED; W 57.3 93 0.0032 26.7 18.3 108 221-332 71-188 (366)
193 2pm9_A Protein WEB1, protein t 55.0 1.1E+02 0.0038 26.9 18.5 108 221-332 167-290 (416)
194 2ecf_A Dipeptidyl peptidase IV 52.9 1.7E+02 0.0059 28.5 16.8 29 222-250 154-183 (741)
195 3lrv_A PRE-mRNA-splicing facto 52.2 43 0.0015 29.4 7.9 66 265-332 127-197 (343)
196 2ojh_A Uncharacterized protein 51.3 1E+02 0.0034 25.3 21.6 176 115-323 85-288 (297)
197 1vyh_C Platelet-activating fac 51.2 1.4E+02 0.0048 26.9 23.0 172 115-317 109-287 (410)
198 3bws_A Protein LP49; two-domai 51.0 1.4E+02 0.0046 26.7 26.1 183 115-332 212-428 (433)
199 3scy_A Hypothetical bacterial 50.9 1.3E+02 0.0043 26.3 12.7 104 224-329 215-330 (361)
200 4a11_B DNA excision repair pro 50.7 1.3E+02 0.0043 26.3 22.9 26 307-332 335-361 (408)
201 3hfq_A Uncharacterized protein 50.4 1.2E+02 0.0042 26.1 23.2 198 115-329 86-310 (347)
202 3v7d_B Cell division control p 49.0 1.5E+02 0.0052 26.8 19.2 141 115-286 311-456 (464)
203 1sq9_A Antiviral protein SKI8; 47.1 1.5E+02 0.005 26.0 24.3 110 221-332 235-391 (397)
204 3q7m_A Lipoprotein YFGL, BAMB; 46.8 1.5E+02 0.0052 26.1 24.1 177 127-333 103-293 (376)
205 2p9w_A MAL S 1 allergenic prot 46.7 1.7E+02 0.0058 26.6 16.8 68 265-332 138-211 (334)
206 1k3i_A Galactose oxidase precu 46.2 79 0.0027 31.1 9.4 57 268-325 247-305 (656)
207 1k3i_A Galactose oxidase precu 45.8 64 0.0022 31.8 8.7 58 268-326 460-530 (656)
208 3tc9_A Hypothetical hydrolase; 44.5 1.9E+02 0.0066 26.7 13.4 142 168-332 141-297 (430)
209 4aez_A CDC20, WD repeat-contai 44.4 1.7E+02 0.0058 26.0 25.5 104 222-332 262-376 (401)
210 1vyh_C Platelet-activating fac 42.8 1.9E+02 0.0064 26.0 24.5 66 265-333 340-408 (410)
211 3zwl_B Eukaryotic translation 42.6 1.6E+02 0.0054 25.1 25.3 191 115-327 75-281 (369)
212 3iz6_a 40S ribosomal protein R 42.5 1.6E+02 0.0054 26.1 10.2 68 265-332 251-325 (380)
213 4hw6_A Hypothetical protein, I 42.3 1.4E+02 0.0047 27.8 10.0 105 223-334 142-257 (433)
214 2g8s_A Glucose/sorbosone dehyd 42.2 1.9E+02 0.0064 25.9 14.5 54 267-323 133-214 (353)
215 2vdu_B TRNA (guanine-N(7)-)-me 42.0 2E+02 0.0068 26.1 22.8 194 115-331 103-334 (450)
216 3o4h_A Acylamino-acid-releasin 41.7 2.3E+02 0.0079 26.7 17.8 62 267-332 153-223 (582)
217 3dsm_A Uncharacterized protein 41.5 1.8E+02 0.0061 25.4 21.7 102 225-333 177-299 (328)
218 2vdu_B TRNA (guanine-N(7)-)-me 41.2 2.1E+02 0.007 26.0 22.7 106 222-332 152-267 (450)
219 2ynn_A Coatomer subunit beta'; 40.6 1.7E+02 0.0058 24.9 25.3 188 115-332 14-213 (304)
220 3i2n_A WD repeat-containing pr 40.4 1.7E+02 0.0059 24.9 19.5 64 265-332 166-239 (357)
221 3fvz_A Peptidyl-glycine alpha- 39.9 1.9E+02 0.0063 25.1 30.0 202 116-332 92-318 (329)
222 3tc9_A Hypothetical hydrolase; 39.5 2.3E+02 0.0079 26.1 11.6 101 225-333 142-254 (430)
223 2p9w_A MAL S 1 allergenic prot 39.3 2.2E+02 0.0076 25.8 22.0 121 165-301 138-271 (334)
224 3qc2_A Glycosyl hydrolase; 5-b 38.1 2.4E+02 0.0081 25.8 11.7 16 184-200 87-102 (364)
225 3gre_A Serine/threonine-protei 37.5 2.2E+02 0.0076 25.3 18.9 66 265-332 216-288 (437)
226 1pby_B Quinohemoprotein amine 37.5 1.8E+02 0.0063 24.4 14.8 63 265-332 242-306 (337)
227 3no2_A Uncharacterized protein 37.3 1.9E+02 0.0067 24.6 23.2 196 99-324 24-230 (276)
228 3hrp_A Uncharacterized protein 37.2 2.4E+02 0.0083 25.7 21.2 109 224-333 223-351 (409)
229 3vu4_A KMHSV2; beta-propeller 36.9 2.2E+02 0.0074 25.0 17.8 67 265-332 197-267 (355)
230 1l0q_A Surface layer protein; 36.9 2.1E+02 0.0072 24.9 24.9 181 116-332 33-229 (391)
231 2blf_A SORA, sulfite\:cytochro 36.6 23 0.00077 33.0 3.3 17 139-155 297-313 (373)
232 2qe8_A Uncharacterized protein 36.2 2.2E+02 0.0075 24.9 19.7 203 115-325 67-309 (343)
233 2qe8_A Uncharacterized protein 34.6 2.3E+02 0.008 24.7 12.9 77 222-300 69-162 (343)
234 3v65_B Low-density lipoprotein 33.2 2.7E+02 0.0093 25.1 27.1 208 93-332 97-314 (386)
235 3gre_A Serine/threonine-protei 32.8 2.1E+02 0.0071 25.6 9.5 24 115-139 112-135 (437)
236 3dsm_A Uncharacterized protein 32.2 2.5E+02 0.0086 24.3 16.8 136 166-326 46-191 (328)
237 1erj_A Transcriptional repress 31.4 2.8E+02 0.0094 24.6 23.8 106 222-332 168-283 (393)
238 3u4y_A Uncharacterized protein 31.3 2.4E+02 0.0082 23.8 23.2 104 224-332 132-248 (331)
239 2xyi_A Probable histone-bindin 31.1 2.9E+02 0.01 24.8 11.6 68 265-332 233-305 (430)
240 2pm7_B Protein transport prote 29.2 2.6E+02 0.0088 23.6 26.7 68 265-332 206-281 (297)
241 1ofz_A Fucose-specific lectin; 28.9 3.1E+02 0.011 24.4 17.5 186 130-332 25-239 (312)
242 4ery_A WD repeat-containing pr 28.1 2.7E+02 0.0092 23.4 27.2 190 115-332 66-264 (312)
243 1xfd_A DIP, dipeptidyl aminope 28.0 56 0.0019 32.0 4.8 66 266-332 63-139 (723)
244 2hqs_A Protein TOLB; TOLB, PAL 27.7 3.4E+02 0.012 24.4 24.8 173 115-323 179-370 (415)
245 3vgz_A Uncharacterized protein 27.6 2.8E+02 0.0096 23.5 24.5 192 117-332 91-299 (353)
246 2wg3_C Hedgehog-interacting pr 27.3 3.9E+02 0.013 25.1 11.2 100 224-323 18-155 (463)
247 2j04_B YDR362CP, TAU91; beta p 26.6 4.2E+02 0.014 25.1 15.5 199 117-333 210-425 (524)
248 1z68_A Fibroblast activation p 25.6 2.2E+02 0.0075 27.7 8.8 58 266-324 112-186 (719)
249 3mmy_A MRNA export factor; mRN 25.4 3.1E+02 0.01 23.2 23.5 64 115-187 87-155 (368)
250 1z68_A Fibroblast activation p 24.3 68 0.0023 31.5 4.7 101 225-332 21-135 (719)
251 1n7d_A LDL receptor, low-densi 24.0 5.3E+02 0.018 25.5 13.6 191 116-332 407-610 (699)
252 2a9d_A Sulfite oxidase; molybd 23.2 51 0.0017 30.6 3.2 17 139-155 288-304 (372)
253 1xfd_A DIP, dipeptidyl aminope 22.8 2.1E+02 0.0072 27.7 8.0 58 266-324 116-190 (723)
254 3hrp_A Uncharacterized protein 22.1 4.4E+02 0.015 23.8 23.6 197 120-332 176-406 (409)
255 1ogp_A Sulfite oxidase; oxidor 21.2 61 0.0021 30.3 3.3 26 129-154 287-316 (393)
256 2xts_A Sulfite dehydrogenase; 21.2 61 0.0021 30.3 3.3 16 139-154 300-315 (390)
257 4gga_A P55CDC, cell division c 20.9 4.4E+02 0.015 23.4 27.0 62 75-139 110-171 (420)
258 3taw_A Hypothetical glycoside 20.9 4.6E+02 0.016 23.6 12.0 14 185-199 85-98 (356)
259 3o4h_A Acylamino-acid-releasin 20.4 2.5E+02 0.0086 26.4 7.8 96 225-329 155-269 (582)
260 1sox_A Sulfite oxidase; oxidor 20.2 63 0.0022 30.9 3.3 17 139-155 382-398 (466)
No 1
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=100.00 E-value=8.5e-31 Score=246.15 Aligned_cols=244 Identities=27% Similarity=0.603 Sum_probs=182.2
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCC-CCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPV-DPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAE 158 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~-~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~ 158 (334)
.+..|++|+. +.|+||+|+|++|+.+..+. .....+.+|+|. ++++|++|+.|.|++|+|+|+||+.+..+...
T Consensus 46 ~~~~~~~G~~--g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~---~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~ 120 (327)
T 2xbg_A 46 RHHGWLVGVN--ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQ---GNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKL 120 (327)
T ss_dssp SSCEEEEETT--TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEE---TTEEEEEEETTEEEEESSTTSSCEECCCCTTC
T ss_pred CCcEEEEcCC--CeEEEeCCCCCCCeECCCCCCCCCccEEEEEec---CCeEEEEECCCeEEEECCCCCCceECccccCC
Confidence 4556777765 78999999999999987543 223688999996 37899999999999999999999998754321
Q ss_pred ccCcceeEEEEEEe-CCeEEEEEcCCEEEEEcCCCCCeEEeecCCC--------CC-CC-----------------cccc
Q 036387 159 EEDFNYRFNSISFK-GKEGWIVGKPAILLHTSDAGESWERIPLSSQ--------LP-GD-----------------MAFW 211 (334)
Q Consensus 159 ~~~~~~~~~~I~~~-~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~--------l~-g~-----------------~~~~ 211 (334)
+. .+..|.+. ++++|+++..+.||||+|+|+||+.+..+.. .+ +. ...|
T Consensus 121 ~~----~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 121 PG----SPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SS----CEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC
T ss_pred CC----CeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce
Confidence 11 24567664 5889999988999999999999999875421 00 00 0111
Q ss_pred cccCccccceEeeeeEeecCCEEEEEcCCeEEEe-cCCCcceeeEecccc--CCCeeeEEEEeecCCeEEEEeCCCcEEE
Q 036387 212 QPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLS-KGTGITEEFEEVPVQ--SRGFGILDVGYRSQDEAWAAGGSGVLLK 288 (334)
Q Consensus 212 ~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~S-~D~G~tW~w~~~~~~--~~~~~~~~v~~~~~~~~~~~G~~G~i~~ 288 (334)
..........+..+.+.+++.+|+++..|.+++| .|+|++| +++..+ .....++++.+.+++.+|++|..|.+|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW--~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i~~ 274 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENW--GELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGALLC 274 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEE--CCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCEEE
T ss_pred eECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCee--EeccCCcccCCcceEEEEecCCCEEEEEeCCCeEEE
Confidence 1111111223445556677889999989999999 5889976 554433 1223578888887889999999999999
Q ss_pred EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEEcC
Q 036387 289 TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYLG 334 (334)
Q Consensus 289 S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s~~ 334 (334)
|.|+|+||+.+......+..+++|.+.+++++|++|++|.|+++++
T Consensus 275 S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 275 SQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp ESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred eCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 9999999999886323346899999988899999999999999875
No 2
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=99.97 E-value=6.3e-30 Score=240.22 Aligned_cols=216 Identities=30% Similarity=0.593 Sum_probs=172.8
Q ss_pred ccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEE
Q 036387 91 YEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSIS 170 (334)
Q Consensus 91 ~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~ 170 (334)
+..++||+|+|++|+.+..|.. ..+.+|+|. +++++|++|+.|.|++|+|+|+||+++..+... ....+.+|.
T Consensus 14 ~~~~~~s~d~g~~W~~~~~~~~--~~~~~v~~~--~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~---~~~~~~~i~ 86 (327)
T 2xbg_A 14 PRGSAIPALDYNPWEAIQLPTT--ATILDMSFI--DRHHGWLVGVNATLMETRDGGQTWEPRTLVLDH---SDYRFNSVS 86 (327)
T ss_dssp ----CCCBCSSCCEEEEECSCS--SCEEEEEES--SSSCEEEEETTTEEEEESSTTSSCEECCCCCSC---CCCEEEEEE
T ss_pred ccceeecCCCCCCceEeecCCC--CcEEEEEEC--CCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCC---CCccEEEEE
Confidence 3569999999999999987755 689999997 678999999999999999999999998654321 124688999
Q ss_pred EeCCeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEEEecCCCc
Q 036387 171 FKGKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGTGI 250 (334)
Q Consensus 171 ~~~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~S~D~G~ 250 (334)
+.++++|++|+.+.||+|+|+|+||+.+.....+++. +..+.+..++.+|+++..+.||+|.|+|+
T Consensus 87 ~~~~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~--------------~~~i~~~~~~~~~~~~~~g~v~~S~DgG~ 152 (327)
T 2xbg_A 87 FQGNEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGS--------------PRLIKALGNGSAEMITNVGAIYRTKDSGK 152 (327)
T ss_dssp EETTEEEEEEETTEEEEESSTTSSCEECCCCTTCSSC--------------EEEEEEEETTEEEEEETTCCEEEESSTTS
T ss_pred ecCCeEEEEECCCeEEEECCCCCCceECccccCCCCC--------------eEEEEEECCCCEEEEeCCccEEEEcCCCC
Confidence 9888999999999999999999999998754323322 12244456778999998899999999999
Q ss_pred ceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCC-CcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeE
Q 036387 251 TEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNG-GKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVL 329 (334)
Q Consensus 251 tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~Dg-G~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~i 329 (334)
||+ .+..+.. ..++++.+.+++.+|+++..|.+|+|.|+ |++|+.+.. +....+.++.+.+++++|+++.+|.+
T Consensus 153 tW~--~~~~~~~-~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~--~~~~~~~~~~~~~~g~~~~~~~~G~~ 227 (327)
T 2xbg_A 153 NWQ--ALVQEAI-GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR--TTSRRLHNMGFTPDGRLWMIVNGGKI 227 (327)
T ss_dssp SEE--EEECSCC-CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC--CSSSCEEEEEECTTSCEEEEETTTEE
T ss_pred CCE--EeecCCC-cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC--CCCCccceeEECCCCCEEEEeCCceE
Confidence 874 4433222 25778888888899999999999999997 899999976 34568999999888999999999998
Q ss_pred EEE
Q 036387 330 LQY 332 (334)
Q Consensus 330 l~s 332 (334)
+++
T Consensus 228 ~~s 230 (327)
T 2xbg_A 228 AFS 230 (327)
T ss_dssp EEE
T ss_pred EEe
Confidence 887
No 3
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=99.91 E-value=2.7e-22 Score=192.25 Aligned_cols=244 Identities=13% Similarity=0.125 Sum_probs=157.0
Q ss_pred ceeEEEecCCCcc----ceEEecCCCCCcEEcccCC----CC-------CeeeEEEEEecCC-CCEEEEEEcCCeEEEEc
Q 036387 80 LSISLAATTGLYE----QPAKSEEALSAWERVYIPV----DP-------GVVLLDIAFVPDD-LNHGFLLGTRQTLLETK 143 (334)
Q Consensus 80 ~g~~~~~g~~~~g----~i~~S~DgG~tW~~~~~p~----~~-------~~~l~~I~~~p~d-~~~~~avG~~g~i~~S~ 143 (334)
.+.+|+++.. + .|++|+|+|++|+++..+. .. ...+.+|++.|.| ++++|+++..+.||+|+
T Consensus 67 ~~~l~~g~~~--g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~ 144 (394)
T 3b7f_A 67 PERMLMAART--GHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST 144 (394)
T ss_dssp TTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES
T ss_pred CCeEEEEecC--CCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc
Confidence 4667777654 4 7999999999999987532 10 1256778887755 78999988888999999
Q ss_pred CCCcCeEeCcC----CCCc--------ccCcceeEEEEEEeC---CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCc
Q 036387 144 DGGKTWAPRSI----PSAE--------EEDFNYRFNSISFKG---KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDM 208 (334)
Q Consensus 144 DgG~TW~~~~~----p~~~--------~~~~~~~~~~I~~~~---~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~ 208 (334)
|+|+||+.+.. |... .......+..|.+++ +++|+....++||+|+|+|+||+.+.... ..
T Consensus 145 DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~--~~-- 220 (394)
T 3b7f_A 145 DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGC--AA-- 220 (394)
T ss_dssp STTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTC--CC--
T ss_pred CCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCc--cc--
Confidence 99999998742 2100 000112567888863 57888877788999999999999986421 10
Q ss_pred ccccccC-ccccceEeeeeEeec--CCEEEEEcCCeEEEecCCCcceeeEecc--ccCCC-eeeEEEEee--cCCeEEEE
Q 036387 209 AFWQPHN-RAVARRIQNMGWRAD--GGLWLLVRGGGLFLSKGTGITEEFEEVP--VQSRG-FGILDVGYR--SQDEAWAA 280 (334)
Q Consensus 209 ~~~~~~~-~~~~~~i~~~~~~~~--g~~~~~~~~g~i~~S~D~G~tW~w~~~~--~~~~~-~~~~~v~~~--~~~~~~~~ 280 (334)
.+ .+.. ......+..+.+.+. +.+|+.+ .++||+|.|+|++| +.+. ++... ...+.+.+. +++.+|++
T Consensus 221 ~~-~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~~gl~~s~D~G~tW--~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 221 NF-LPDPNVEFGHDPHCVVQHPAAPDILYQQN-HCGIYRMDRREGVW--KRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp TT-SSSSSSSSCBCEEEEEECSSSTTEEEEEE-TTEEEEEETTTTEE--ECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred cc-cCCCccccCcceeEEEECCCCCCEEEEEc-CCeEEEeCCCCCcc--eECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 00 0000 000012444555553 4566654 67899999999976 5543 33210 123455554 46789987
Q ss_pred eC-------------CCcEEEEcCCCcCcEEcccCCCcccc-----eeEEEEee--CCeEEEEeCCeeEEEEc
Q 036387 281 GG-------------SGVLLKTTNGGKTWIREKAADNIAAN-----LYSVKFIN--EKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 281 G~-------------~G~i~~S~DgG~tW~~~~~~~~~~~~-----l~~i~~~~--~~~~~a~G~~G~il~s~ 333 (334)
.. ...||+|+|+|++|+++....+.... ...+++.+ .+++|+++..|.|++|+
T Consensus 297 t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~ 369 (394)
T 3b7f_A 297 PMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA 369 (394)
T ss_dssp ECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES
T ss_pred eccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC
Confidence 41 24799999999999998752111111 13466643 35688887788888774
No 4
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=99.91 E-value=1.4e-22 Score=211.23 Aligned_cols=238 Identities=11% Similarity=0.138 Sum_probs=157.2
Q ss_pred eeEEEecCCCccceEEecCCCCCcEEcccCCC----CCeeeEEEEEecCCCCEEEEEEcC------CeEEEEcCCCcCeE
Q 036387 81 SISLAATTGLYEQPAKSEEALSAWERVYIPVD----PGVVLLDIAFVPDDLNHGFLLGTR------QTLLETKDGGKTWA 150 (334)
Q Consensus 81 g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~----~~~~l~~I~~~p~d~~~~~avG~~------g~i~~S~DgG~TW~ 150 (334)
+.+|+.+.. +.|+||+|+|++|+++..+.. ....+.+|++.|.+++++|++... +.||+|+|+|+||+
T Consensus 28 ~~~~a~~~~--ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~v~~S~DgG~TW~ 105 (789)
T 1sqj_A 28 DLLYARTDI--GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAAFYVSEDRGQSFT 105 (789)
T ss_dssp TCEEEEESS--SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCEEEEESSTTSEEE
T ss_pred CEEEEEecC--CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccEEEEECCCCCcce
Confidence 445666654 679999999999999865321 124688999998778888887532 78999999999999
Q ss_pred eCcCCCCccc--CcceeEEEEEEeC---CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeee
Q 036387 151 PRSIPSAEEE--DFNYRFNSISFKG---KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNM 225 (334)
Q Consensus 151 ~~~~p~~~~~--~~~~~~~~I~~~~---~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~ 225 (334)
++..+..... +....+..|.+++ +.+|+....+.||||+|+|+||+++...+.+.... ..+..+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~-----------~~~~~i 174 (789)
T 1sqj_A 106 IYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNG-----------IGYTSV 174 (789)
T ss_dssp EEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTT-----------TCEEEE
T ss_pred eccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCC-----------CCeEEE
Confidence 9876432110 0000233456653 56777665788999999999999987432111110 123334
Q ss_pred eEee--cCCEEEEEcC-CeEEEecCCCcceeeEecc-ccCCC---------------eeeEEEEeec-CCeEEEE-----
Q 036387 226 GWRA--DGGLWLLVRG-GGLFLSKGTGITEEFEEVP-VQSRG---------------FGILDVGYRS-QDEAWAA----- 280 (334)
Q Consensus 226 ~~~~--~g~~~~~~~~-g~i~~S~D~G~tW~w~~~~-~~~~~---------------~~~~~v~~~~-~~~~~~~----- 280 (334)
.+.+ .+.+|+.... +.||+|+|+|+||+ .+. .+... .....+.+.+ ++.+|++
T Consensus 175 ~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~ 252 (789)
T 1sqj_A 175 IFDPERNGTIYASATAPQGMYVTHDGGVSWE--PVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYP 252 (789)
T ss_dssp EECTTSTTCEEEEESSTTCEEEESSTTSSCE--ECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSC
T ss_pred EECCCCCCEEEEEEcCCCeEEEEcCCCcCcc--cCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCC
Confidence 4443 2467877765 89999999999874 432 22211 0113444443 7888887
Q ss_pred ----eCCCcEEEEcCCCcCcEEcccCCCc---------cc---ceeEEEEee--CCeEEEEeCC-------eeEEEEc
Q 036387 281 ----GGSGVLLKTTNGGKTWIREKAADNI---------AA---NLYSVKFIN--EKKGFVLGND-------GVLLQYL 333 (334)
Q Consensus 281 ----G~~G~i~~S~DgG~tW~~~~~~~~~---------~~---~l~~i~~~~--~~~~~a~G~~-------G~il~s~ 333 (334)
|..+.||+|+|+|++|+.+...... .. .+..|++.+ .+++|+++.+ +.|++|+
T Consensus 253 ~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~ 330 (789)
T 1sqj_A 253 GPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFCGLSVDATNPNRLVVITLDRDPGPALDSIYLST 330 (789)
T ss_dssp SSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEEEEEEETTEEEEEEEEEECCCSCSSCCCEEEES
T ss_pred CCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceEEEEECCCCCCEEEEEEeccCCCcccccEEEec
Confidence 3678899999999999998752110 11 345777753 4679998864 7788875
No 5
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=99.90 E-value=2.3e-21 Score=185.85 Aligned_cols=238 Identities=16% Similarity=0.179 Sum_probs=152.4
Q ss_pred eeEEEecCCCccceEEec-CCCCCcEEccc-CCCCCeeeEEEEEecCCCCEEEEEEcCC----eEEEEcCCCcCeEeCcC
Q 036387 81 SISLAATTGLYEQPAKSE-EALSAWERVYI-PVDPGVVLLDIAFVPDDLNHGFLLGTRQ----TLLETKDGGKTWAPRSI 154 (334)
Q Consensus 81 g~~~~~g~~~~g~i~~S~-DgG~tW~~~~~-p~~~~~~l~~I~~~p~d~~~~~avG~~g----~i~~S~DgG~TW~~~~~ 154 (334)
+.+|+++.. +.++++. |+|++|+.+.. .. ...+.+|+++|.|++++|+++..| .|++|+|+|+||+++..
T Consensus 23 g~l~vgt~~--Gl~~~~~~~~g~~W~~~~~~~~--~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 23 VMLLVATIK--GAWFLASDPARRTWELRGPVFL--GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp CEEEEEETT--EEEEEEECTTSCSEEEEEEEST--TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSB
T ss_pred CEEEEEecC--ceEEEECCCCCCCceECCccCC--CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCc
Confidence 456776654 5444444 46899998642 22 367999999887789999998777 89999999999999864
Q ss_pred CCCcccC-------cceeEEEEEEe----CCeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccC---ccccc
Q 036387 155 PSAEEED-------FNYRFNSISFK----GKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHN---RAVAR 220 (334)
Q Consensus 155 p~~~~~~-------~~~~~~~I~~~----~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~---~~~~~ 220 (334)
+...+.. ....+.+|.+. ++.+|+++..++||||+|+|+||+.+......+. ...|.... .....
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~-~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPM-RRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTT-HHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCcc-ccccccccccCCCCCC
Confidence 3211110 01246677775 4788998888999999999999999853111111 01111000 00011
Q ss_pred eEeeeeEee--cCCEEEEEcCCeEEEecCCCcceeeEeccc-----cC----CCeeeEEEEeecC--CeEEEEeCCCcEE
Q 036387 221 RIQNMGWRA--DGGLWLLVRGGGLFLSKGTGITEEFEEVPV-----QS----RGFGILDVGYRSQ--DEAWAAGGSGVLL 287 (334)
Q Consensus 221 ~i~~~~~~~--~g~~~~~~~~g~i~~S~D~G~tW~w~~~~~-----~~----~~~~~~~v~~~~~--~~~~~~G~~G~i~ 287 (334)
.+..+.+.+ ++.+|+.+..++||+|.|+|++|+-..... |. ....+..+.+.+. +.+|+.. .+.||
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~-~~gl~ 256 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN-HCGIY 256 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE-TTEEE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc-CCeEE
Confidence 344455554 357898887889999999999874322111 10 0123566666543 7788854 56699
Q ss_pred EEcCCCcCcEEcccCCCc--ccceeEEEEe--eCCeEEEEe
Q 036387 288 KTTNGGKTWIREKAADNI--AANLYSVKFI--NEKKGFVLG 324 (334)
Q Consensus 288 ~S~DgG~tW~~~~~~~~~--~~~l~~i~~~--~~~~~~a~G 324 (334)
+|+|+|++|+.+....+. ....+.|.+. +.+++|+++
T Consensus 257 ~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 257 RMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEETTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EeCCCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 999999999998752111 1345667765 467899874
No 6
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=99.89 E-value=1.7e-21 Score=202.41 Aligned_cols=237 Identities=15% Similarity=0.160 Sum_probs=155.6
Q ss_pred eEEEecCCCccceEEecCCCCCcEEcccCC-----C----CCeeeEEEEEecCCCCEEEEEEc-------CCeEEEEcCC
Q 036387 82 ISLAATTGLYEQPAKSEEALSAWERVYIPV-----D----PGVVLLDIAFVPDDLNHGFLLGT-------RQTLLETKDG 145 (334)
Q Consensus 82 ~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~-----~----~~~~l~~I~~~p~d~~~~~avG~-------~g~i~~S~Dg 145 (334)
.+|+.+.. +.|+||+|+|+||+++..+. . ....+.+|++.|.|++++|++.. .+.||||+|+
T Consensus 35 ~~y~~~~~--ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~~~~~~~~i~~S~Dg 112 (763)
T 3a0f_A 35 LIYARTDI--GGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYVQWDPWAAFLVSDDR 112 (763)
T ss_dssp CEEEEESS--SCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCTTTCSCCEEEEESST
T ss_pred EEEEEecc--CcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccccCCCCceEEEECCC
Confidence 34555543 67999999999999987532 1 12458889998888899998642 4789999999
Q ss_pred CcCeEeCcCCCCccc--CcceeEEEEEEe---CCeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccc
Q 036387 146 GKTWAPRSIPSAEEE--DFNYRFNSISFK---GKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVAR 220 (334)
Q Consensus 146 G~TW~~~~~p~~~~~--~~~~~~~~I~~~---~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~ 220 (334)
|+||+++..|..... .....+..|.+. ++.+|+++..+.||||+|+|+||+++.. ++..... ..
T Consensus 113 G~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~S~DgG~TW~~~~~---~~~~~~~--------~~ 181 (763)
T 3a0f_A 113 GKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWRSTDRAQTWSRMNQ---LPDSSTY--------GI 181 (763)
T ss_dssp TSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEEESSTTSSCEECTT---SCCCSCT--------TT
T ss_pred CCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEEECCCCcCcccccc---CcccCCC--------cc
Confidence 999999876532110 000011245555 3688988877889999999999999863 2211000 01
Q ss_pred eEeeeeEee--cCCEEEEEcCC-eEEEecCCCcceeeEecc-ccC-------------------CCeeeEEEEeecCCeE
Q 036387 221 RIQNMGWRA--DGGLWLLVRGG-GLFLSKGTGITEEFEEVP-VQS-------------------RGFGILDVGYRSQDEA 277 (334)
Q Consensus 221 ~i~~~~~~~--~g~~~~~~~~g-~i~~S~D~G~tW~w~~~~-~~~-------------------~~~~~~~v~~~~~~~~ 277 (334)
.+..+.+.+ .+.+|++...+ .||+|+|+|+||+ .+. .+. .......+.+.+++.+
T Consensus 182 ~~~~i~~~p~~~~~~~~~~~~~g~v~~S~DgG~tW~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l 259 (763)
T 3a0f_A 182 GIISVIFDPKNVGTAYVASHAVGGLWVTWDGGANWS--QVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRL 259 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSTTCEEEESSSSSSCE--ECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCE
T ss_pred ceEEEEECCCCCCEEEEEEeCCCeEEEECCCCCCcc--ccCCCccccccccccccccccccccCCCCcceeEEECCCCcE
Confidence 123344443 34688888777 6999999999874 432 221 1112233344456788
Q ss_pred EEEe---------CCCcEEEEcCCCcCcEEcccCCCccc--------------ceeEEEEeeCCeEEEEeCC----eeEE
Q 036387 278 WAAG---------GSGVLLKTTNGGKTWIREKAADNIAA--------------NLYSVKFINEKKGFVLGND----GVLL 330 (334)
Q Consensus 278 ~~~G---------~~G~i~~S~DgG~tW~~~~~~~~~~~--------------~l~~i~~~~~~~~~a~G~~----G~il 330 (334)
|++. ..+.+|+|+|+|++|+.+........ .++.|++.+.+++|+++.+ +.++
T Consensus 260 ~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~~~~~l~ 339 (763)
T 3a0f_A 260 YITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSREGANTYPAPTGNKKVVPGGWNGISVGNGDTVVVSTLDANGEDSVY 339 (763)
T ss_dssp EEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSSSSCEESCCCCCTTSCCCEEEEEEECSTBCEEEEEESCTTSCCEE
T ss_pred EEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCCCCccccccccccccccCCceeEEEcCCCeEEEEecCCCCCCCEE
Confidence 8873 45789999999999999864111001 2257776556789998864 6777
Q ss_pred EEc
Q 036387 331 QYL 333 (334)
Q Consensus 331 ~s~ 333 (334)
+|+
T Consensus 340 ~S~ 342 (763)
T 3a0f_A 340 LSR 342 (763)
T ss_dssp EES
T ss_pred EEC
Confidence 764
No 7
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=99.86 E-value=2.9e-20 Score=192.48 Aligned_cols=245 Identities=13% Similarity=0.149 Sum_probs=152.0
Q ss_pred eeEEEecCCCccceEEecCCCCCcEEcccCCCC----CeeeEEEEEecCCCCEEEEEEc---------CCeEEEEcCCCc
Q 036387 81 SISLAATTGLYEQPAKSEEALSAWERVYIPVDP----GVVLLDIAFVPDDLNHGFLLGT---------RQTLLETKDGGK 147 (334)
Q Consensus 81 g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~----~~~l~~I~~~p~d~~~~~avG~---------~g~i~~S~DgG~ 147 (334)
+.+|+.... +.|+||+|+|++|+++...... ...+.+|+++|.|++++|++.. .+.||||+|+|+
T Consensus 36 ~~~~~~~~~--ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~~~l~~S~DgG~ 113 (737)
T 2cn3_A 36 DLIYARAAI--GGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNMGAILRSTDRGE 113 (737)
T ss_dssp TCEEEECSS--SCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCCCEEEEESSSSS
T ss_pred CEEEEEecC--CcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCCccEEEeCCCCC
Confidence 344554433 6799999999999998642210 1458899999988999998742 357999999999
Q ss_pred CeEeCcCCCCccc--CcceeEEEEEEeC---CeEEEEEcC-CEEEEEcCCCCCeEEeecCCCCCCCcccc-cccC--ccc
Q 036387 148 TWAPRSIPSAEEE--DFNYRFNSISFKG---KEGWIVGKP-AILLHTSDAGESWERIPLSSQLPGDMAFW-QPHN--RAV 218 (334)
Q Consensus 148 TW~~~~~p~~~~~--~~~~~~~~I~~~~---~~~~~vG~~-g~i~~S~DgG~TW~~~~~~~~l~g~~~~~-~~~~--~~~ 218 (334)
||+++..+..... +....+.+|.+++ +.+|+.... .+||||+|+|+||+++.. ++....+. .+.. ...
T Consensus 114 TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~---~~~~~~~~~~p~~~~~~~ 190 (737)
T 2cn3_A 114 TWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVES---FPNPGTYIYDPNFDYTKD 190 (737)
T ss_dssp SCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTT---CCCCCCCBSCTTSTTTCS
T ss_pred CcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccC---CCCCcccccCcccccccC
Confidence 9999876432100 0001234566653 566665534 689999999999999863 22111111 0100 000
Q ss_pred cceEeeeeEeec--------CCEEEEEcCC--eEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEe------
Q 036387 219 ARRIQNMGWRAD--------GGLWLLVRGG--GLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAG------ 281 (334)
Q Consensus 219 ~~~i~~~~~~~~--------g~~~~~~~~g--~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G------ 281 (334)
...+..+.+.+. ..+|+...++ +||+|+|+|+|| +++. .+.. .....+.+.+++.+|++.
T Consensus 191 ~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW--~~~~~~p~~-~~~~~~~~~~~~~l~~~~~d~~g~ 267 (737)
T 2cn3_A 191 IIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTW--KAVPGQPKG-LLPHHGVLASNGMLYITYGDTCGP 267 (737)
T ss_dssp BCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCC--EECTTCCCS-SEEEEEEECTTSEEEEEEESSCCS
T ss_pred CCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCce--EECCCCCCc-ccceEEEECCCCeEEEEecCCCCc
Confidence 012223344332 3688776443 699999999987 4443 3332 111233444577888763
Q ss_pred ----CCCcEEEEcCCCcCcEEcccCCCc--c--cceeEEEEe--eCCeEEEEeCC-----eeEEEEc
Q 036387 282 ----GSGVLLKTTNGGKTWIREKAADNI--A--ANLYSVKFI--NEKKGFVLGND-----GVLLQYL 333 (334)
Q Consensus 282 ----~~G~i~~S~DgG~tW~~~~~~~~~--~--~~l~~i~~~--~~~~~~a~G~~-----G~il~s~ 333 (334)
..+.||+|.|+|++|+.+...... . -.+..|++. +.+++|+++.. +.|+||+
T Consensus 268 y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~~~l~~S~ 334 (737)
T 2cn3_A 268 YDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPDEYIFRST 334 (737)
T ss_dssp SCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSCCCEEEES
T ss_pred cccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecccCCCCccEEEeC
Confidence 456899999999999998762110 0 123346654 35789998765 6688774
No 8
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=99.86 E-value=2.7e-20 Score=194.01 Aligned_cols=220 Identities=14% Similarity=0.149 Sum_probs=147.8
Q ss_pred CCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC---CeE
Q 036387 100 ALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG---KEG 176 (334)
Q Consensus 100 gG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~---~~~ 176 (334)
.+.+|+.+..... ..+.+|++.|.|++++|+.+..+.||||+|+|+||+++..+.....-....+.+|.+++ +.+
T Consensus 2 ~~~~W~~~~~~~~--g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i 79 (789)
T 1sqj_A 2 EHYEFKNVAIGGG--GYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRL 79 (789)
T ss_dssp --CEEEECCCCBC--SCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEE
T ss_pred CcccceEccCCCC--CcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEE
Confidence 3678999875333 68999999998899999988889999999999999997642211000112477888874 567
Q ss_pred EEEE-c-C----CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee--cCCEEEEEcCCeEEEecCC
Q 036387 177 WIVG-K-P----AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA--DGGLWLLVRGGGLFLSKGT 248 (334)
Q Consensus 177 ~~vG-~-~----g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~--~g~~~~~~~~g~i~~S~D~ 248 (334)
|++. + . +.||||+|+|+||+++..+...++... ..+ .+..+.+.+ .+.+|+..+.++||+|+|+
T Consensus 80 ~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~--~~~------~~~~iav~p~~~~~v~~g~~~~gl~~S~Dg 151 (789)
T 1sqj_A 80 YLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDM--GRN------NGERLAVNPFNSNEVWMGTRTEGIWKSSDR 151 (789)
T ss_dssp EEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTST--TTT------SCCCEEEETTEEEEEEEECSSSCEEEESST
T ss_pred EEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCC--Ccc------ceeEEEEcCCCCCEEEEEeccCCEEEECCC
Confidence 7764 3 2 799999999999999975422211000 000 112234433 3457777667899999999
Q ss_pred CcceeeEeccc-c---CCCeeeEEEEee--cCCeEEEEeCC-CcEEEEcCCCcCcEEcccCCCcccc-------e-----
Q 036387 249 GITEEFEEVPV-Q---SRGFGILDVGYR--SQDEAWAAGGS-GVLLKTTNGGKTWIREKAADNIAAN-------L----- 309 (334)
Q Consensus 249 G~tW~w~~~~~-~---~~~~~~~~v~~~--~~~~~~~~G~~-G~i~~S~DgG~tW~~~~~~~~~~~~-------l----- 309 (334)
|+||+ ++.. + .....+..+.+. +++.+|+.... +.||+|+|+|+||+.+... .... +
T Consensus 152 G~TW~--~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~S~DgG~TW~~~~~~--~~~~~~~~~~~~~~~~~ 227 (789)
T 1sqj_A 152 AKTWT--NVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYVTHDGGVSWEPVAGQ--PSSWLNRTTGAFPDKKP 227 (789)
T ss_dssp TSSCE--EETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEEESSTTSSCEECTTC--CCSCCHHHHHTSTTCCC
T ss_pred CcccC--CCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEEEcCCCcCcccCCCC--cCccccccccccCcccc
Confidence 99874 4332 1 111345556554 35678887655 8899999999999998731 1111 1
Q ss_pred -----eEEEEee-CCeEEEE---------eCCeeEEEEc
Q 036387 310 -----YSVKFIN-EKKGFVL---------GNDGVLLQYL 333 (334)
Q Consensus 310 -----~~i~~~~-~~~~~a~---------G~~G~il~s~ 333 (334)
..+.+.+ ++++|++ |..|.|+||+
T Consensus 228 ~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~ 266 (789)
T 1sqj_A 228 ASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQN 266 (789)
T ss_dssp SSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEE
T ss_pred cccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEe
Confidence 5666655 7889988 4778888875
No 9
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=99.86 E-value=2.3e-20 Score=193.81 Aligned_cols=217 Identities=17% Similarity=0.136 Sum_probs=141.5
Q ss_pred cceEEecCCCCCcEEcccCC--CCCeeeEEEEEecCCCCEEEEEEc--CCeEEEEcCCCcCeEeCc-CCCCcccCcceeE
Q 036387 92 EQPAKSEEALSAWERVYIPV--DPGVVLLDIAFVPDDLNHGFLLGT--RQTLLETKDGGKTWAPRS-IPSAEEEDFNYRF 166 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~p~--~~~~~l~~I~~~p~d~~~~~avG~--~g~i~~S~DgG~TW~~~~-~p~~~~~~~~~~~ 166 (334)
+.|++|+|+|+||+++.... ........|++.+.+++++|+++. .+.||+|+|+|+||+.+. +|.. .
T Consensus 519 g~i~~S~DgG~tW~~~~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~~~~~v~~S~D~G~tW~~~~~l~~~--------~ 590 (763)
T 3a0f_A 519 TQGAYTTNSGDSWTLFQTCVPSLEVGNGGTIAVGADGKTFVWSPSKADGKGPYTSSDYGKTWTAPSGLSKQ--------T 590 (763)
T ss_dssp TTEEEESSTTSSCEECSSCCTTCBTTBCCEEEECTTSSCEEEECSSCCSSCCEEESSTTSCCBCCBSCCCC--------C
T ss_pred CcEEEECCCCcCCccCCCCCcccccCCcceEEEecCCCcEEEEecccCCCceEEeCCCCCCCeecCCCCCC--------c
Confidence 67999999999999985322 111235567777778888998774 568999999999999884 3321 1
Q ss_pred EEEEEe--CCeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEe--ecCCEEEEEcCCeE
Q 036387 167 NSISFK--GKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWR--ADGGLWLLVRGGGL 242 (334)
Q Consensus 167 ~~I~~~--~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~--~~g~~~~~~~~g~i 242 (334)
..|..+ +...++++..+.||+|+|+|+||+.+... +|.... . . .+ +.+. .++.+|++++.++|
T Consensus 591 ~~i~~d~~~~~~~y~g~~g~v~~S~DgG~tW~~~~~~--lp~~~~-----~---~-~~--i~~~~~~~~~l~~~~~~~~l 657 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYVEGDFFVSTDGGKSYTKKGNG--LPCCWT-----Y---T-GT--PVTSNLRAGELWVSVKGVGI 657 (763)
T ss_dssp SCEEECSSSTTCEEEEETTEEEEESSTTSBCEEECBT--SCCSSC-----C---C-EE--EEECSSSTTCEEEEETTTEE
T ss_pred ceEEEeccCCCEEEEEcCCCEEEEeCCCcCccccccC--CCcccC-----c---c-cc--EEECCCCCCcEEEEcCCCeE
Confidence 233343 33344455789999999999999998543 331000 0 0 01 2222 35789999988899
Q ss_pred EEecCCCcceeeEecc-ccCCCe---eeEEEEee--cCCeEEEEe-----CCCcEEEEcCCCcCcEEcccCCCcccceeE
Q 036387 243 FLSKGTGITEEFEEVP-VQSRGF---GILDVGYR--SQDEAWAAG-----GSGVLLKTTNGGKTWIREKAADNIAANLYS 311 (334)
Q Consensus 243 ~~S~D~G~tW~w~~~~-~~~~~~---~~~~v~~~--~~~~~~~~G-----~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~ 311 (334)
|+|+|+|+|| +++. ++.... ..+.+... +.+.+|++| ..+.||+|.|+|+||+++......-..+..
T Consensus 658 ~~S~D~G~tW--~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~ 735 (763)
T 3a0f_A 658 YHSTDFGNTF--TALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIPSASQPEGLYMSTDNGGLWTRLNDDAHNYGGATV 735 (763)
T ss_dssp EEESSTTSBC--EECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEECSTTSCSEEEEESSTTSCCEECSCTTCCTBCEEE
T ss_pred EEEcCCCCCc--eEccCCCcccccceeEEeeecCCCCCceEEEEEEcccCCCcEEEEeCCCCCCcEeccCccccCCCcce
Confidence 9999999976 5654 333211 01232222 246799999 788999999999999999842111122336
Q ss_pred EEEee--CCeEEEEeCCeeEEE
Q 036387 312 VKFIN--EKKGFVLGNDGVLLQ 331 (334)
Q Consensus 312 i~~~~--~~~~~a~G~~G~il~ 331 (334)
|...+ .+++|+......|+.
T Consensus 736 i~~~p~~~~~v~~~T~GrGi~~ 757 (763)
T 3a0f_A 736 ISGDPRIYGRVYIGMNGRGIIC 757 (763)
T ss_dssp EEECTTSTTEEEEEEBSSCEEE
T ss_pred EEeCCCCCCEEEEeCCCCeEEE
Confidence 66653 457888765444443
No 10
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.8e-20 Score=185.94 Aligned_cols=208 Identities=15% Similarity=0.191 Sum_probs=140.8
Q ss_pred ccceEEecCCCCCcEEcccCCCCC--eeeEEEEEecCCCCEEEEEEc------CCeEEEEcCCCcCeEeCcCCCCcccCc
Q 036387 91 YEQPAKSEEALSAWERVYIPVDPG--VVLLDIAFVPDDLNHGFLLGT------RQTLLETKDGGKTWAPRSIPSAEEEDF 162 (334)
Q Consensus 91 ~g~i~~S~DgG~tW~~~~~p~~~~--~~l~~I~~~p~d~~~~~avG~------~g~i~~S~DgG~TW~~~~~p~~~~~~~ 162 (334)
+++||||+|+|+||+++..+.... ..+.+|++.|.||+++|+++. .+.||+|+|+|+||+.+.+|....
T Consensus 64 ~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p~~~~--- 140 (685)
T 3f6k_A 64 QSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLPFHPL--- 140 (685)
T ss_dssp EEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECSSCBS---
T ss_pred CCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCCCCCc---
Confidence 378999999999999997533211 223689999989999999986 688999999999999987664321
Q ss_pred ceeEEEEEEeC---CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-
Q 036387 163 NYRFNSISFKG---KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR- 238 (334)
Q Consensus 163 ~~~~~~I~~~~---~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~- 238 (334)
..|.+++ +.+|+.+..++||+|+|+|+||+.+.... . ..+| ...+.+|+...
T Consensus 141 ----~~l~~~P~~~~~l~a~~~~~gly~S~DgG~TW~~i~~~v--~--~~~f----------------~~~~~Iy~~~~~ 196 (685)
T 3f6k_A 141 ----TQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKAV--C--LAKW----------------GSDNTIFFTTYA 196 (685)
T ss_dssp ----SCCEEETTEEEEEEEEBTTCCEEEESSTTSSEEEEESSE--E--EEEE----------------CSTTCEEEEECS
T ss_pred ----eEEEEecCCCCEEEEEECCCCEEEEeCCCCCcEEeecCc--c--cccc----------------CCCCeEEEEeec
Confidence 1455664 45566677789999999999999998542 1 1122 12233443321
Q ss_pred -------C--CeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-----CCcEEEEcCCCcCcEEcccCCC
Q 036387 239 -------G--GGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-----SGVLLKTTNGGKTWIREKAADN 304 (334)
Q Consensus 239 -------~--g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-----~G~i~~S~DgG~tW~~~~~~~~ 304 (334)
. -.|++|.|.|++|+ .+.. .+..+.. .++.++++.. ...+|+|.|+|++|.+...|..
T Consensus 197 ~~~~~~~~g~l~L~~S~D~g~t~~--~l~~-----~i~~f~~-~~~yl~va~~~~~g~~~~l~VS~D~G~tf~~a~fP~~ 268 (685)
T 3f6k_A 197 NGSCKADLGALELWRTSDLGKSFK--TIGV-----KIYSFGL-GGRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSV 268 (685)
T ss_dssp SSCTTTTTTSEEEEEESSTTSSCE--EEEE-----EEEEEEE-ETTEEEEEEECTTSSCEEEEEESSTTSSCEECBSCCB
T ss_pred cccccCCCCceEEEEecCCCCCce--Eeec-----cceeeee-eeeEEEEEEecCCCceEEEEEECcCCcceeEeeCCCc
Confidence 1 15889999999863 3221 2233332 2455555432 2368999999999999887533
Q ss_pred cccceeEEEEeeCCeEEE------EeCCeeEEEEc
Q 036387 305 IAANLYSVKFINEKKGFV------LGNDGVLLQYL 333 (334)
Q Consensus 305 ~~~~l~~i~~~~~~~~~a------~G~~G~il~s~ 333 (334)
.....+.|.-...+.+|+ ...-|.|++|+
T Consensus 269 ~~~~~ytIldss~~~Vfl~V~~~~~~~~G~Ly~Sd 303 (685)
T 3f6k_A 269 GQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSD 303 (685)
T ss_dssp CTTCCEEEEEECSSCEEEEEECTTCCSEEEEEEEC
T ss_pred CccceEEEEcCCCCeEEEEEEccCCCceeEEEEeC
Confidence 345667776666777776 23457788875
No 11
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=99.82 E-value=2.5e-18 Score=177.95 Aligned_cols=221 Identities=19% Similarity=0.262 Sum_probs=142.7
Q ss_pred CCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC---CeE
Q 036387 100 ALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG---KEG 176 (334)
Q Consensus 100 gG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~---~~~ 176 (334)
.+.+|+.+..... ...+.+|++.|.|++++||..+.|.||||+|+|+||+++........-....+.+|.+++ +++
T Consensus 9 ~~~~w~~~~~~~~-~g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v 87 (737)
T 2cn3_A 9 VPYKWDNVVIGGG-GGFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRV 87 (737)
T ss_dssp CCEEEEEECCCSB-CSCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCE
T ss_pred CCCeeEEcccCCC-cceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEE
Confidence 3679999975432 238999999998899999877678999999999999997532110000012477888873 577
Q ss_pred EEEEc---------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEEEEcC-CeEEE
Q 036387 177 WIVGK---------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWLLVRG-GGLFL 244 (334)
Q Consensus 177 ~~vG~---------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~~~~~-g~i~~ 244 (334)
|+... .+.||||+|+|+||+++..+..+.+...-+. .+..+.+.+. +.+|+.... .+||+
T Consensus 88 ~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~--------~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 88 YIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRS--------MGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp EEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTT--------SCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred EEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCccc--------ccceEEECCCCCCEEEEeeccCCcEEE
Confidence 77642 3689999999999999875422111000000 1123445442 457766533 78999
Q ss_pred ecCCCcceeeEecc-ccCC--------------CeeeEEEEeecC--------CeEEEEeCCC--cEEEEcCCCcCcEEc
Q 036387 245 SKGTGITEEFEEVP-VQSR--------------GFGILDVGYRSQ--------DEAWAAGGSG--VLLKTTNGGKTWIRE 299 (334)
Q Consensus 245 S~D~G~tW~w~~~~-~~~~--------------~~~~~~v~~~~~--------~~~~~~G~~G--~i~~S~DgG~tW~~~ 299 (334)
|+|+|+||+ ++. ++.. ..++..+.+.+. ..+|+....+ .||+|+|+|+||+.+
T Consensus 160 S~DgG~tW~--~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~ 237 (737)
T 2cn3_A 160 STDYGVTWS--KVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAV 237 (737)
T ss_dssp ESSTTSSCE--ECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEEC
T ss_pred eCCCCccee--cccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEEC
Confidence 999999874 432 2211 113445555432 3778764332 599999999999998
Q ss_pred ccCCCcccce-eEEEEeeCCeEEEEe----------CCeeEEEEc
Q 036387 300 KAADNIAANL-YSVKFINEKKGFVLG----------NDGVLLQYL 333 (334)
Q Consensus 300 ~~~~~~~~~l-~~i~~~~~~~~~a~G----------~~G~il~s~ 333 (334)
.. .....+ ..+.+.+++.+|++. ..|.|+|++
T Consensus 238 ~~--~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~ 280 (737)
T 2cn3_A 238 PG--QPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFN 280 (737)
T ss_dssp TT--CCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEE
T ss_pred CC--CCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEe
Confidence 74 222233 344555578888863 566788874
No 12
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=99.60 E-value=3.9e-14 Score=144.13 Aligned_cols=171 Identities=18% Similarity=0.233 Sum_probs=115.6
Q ss_pred cceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEE
Q 036387 92 EQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISF 171 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~ 171 (334)
+.|+||+|+|+||+.+..|..+ ...|.+.|.+++.+|+++..+.||+|+|+|+||+++... +....|
T Consensus 118 g~v~rS~DgG~TW~~~~~p~~~---~~~l~~~P~~~~~l~a~~~~~gly~S~DgG~TW~~i~~~----------v~~~~f 184 (685)
T 3f6k_A 118 GRIFRSSDFAKNFVQTDLPFHP---LTQMMYSPQNSDYLLALSTENGLWVSKNFGGKWEEIHKA----------VCLAKW 184 (685)
T ss_dssp CEEEEESSTTSSCEEEECSSCB---SSCCEEETTEEEEEEEEBTTCCEEEESSTTSSEEEEESS----------EEEEEE
T ss_pred ceEEEECCCCceeEeccCCCCC---ceEEEEecCCCCEEEEEECCCCEEEEeCCCCCcEEeecC----------cccccc
Confidence 6799999999999998866542 236889988888888888788999999999999998643 222334
Q ss_pred e-CCeEEEEEc--------C--CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc--
Q 036387 172 K-GKEGWIVGK--------P--AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-- 238 (334)
Q Consensus 172 ~-~~~~~~vG~--------~--g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-- 238 (334)
. ++.+|+... . -.|++|+|.|++|+.+... +..+. ..+.-++++..
T Consensus 185 ~~~~~Iy~~~~~~~~~~~~~g~l~L~~S~D~g~t~~~l~~~--------------------i~~f~-~~~~yl~va~~~~ 243 (685)
T 3f6k_A 185 GSDNTIFFTTYANGSCKADLGALELWRTSDLGKSFKTIGVK--------------------IYSFG-LGGRFLFASVMAD 243 (685)
T ss_dssp CSTTCEEEEECSSSCTTTTTTSEEEEEESSTTSSCEEEEEE--------------------EEEEE-EETTEEEEEEECT
T ss_pred CCCCeEEEEeeccccccCCCCceEEEEecCCCCCceEeecc--------------------ceeee-eeeeEEEEEEecC
Confidence 4 356665421 1 2689999999999987632 11111 12333444432
Q ss_pred ---CCeEEEecCCCcceeeEeccccCC-CeeeEEEEeecCCeEEE-E-----eCCCcEEEEcCCCcCcEE
Q 036387 239 ---GGGLFLSKGTGITEEFEEVPVQSR-GFGILDVGYRSQDEAWA-A-----GGSGVLLKTTNGGKTWIR 298 (334)
Q Consensus 239 ---~g~i~~S~D~G~tW~w~~~~~~~~-~~~~~~v~~~~~~~~~~-~-----G~~G~i~~S~DgG~tW~~ 298 (334)
...+++|.|+|++| .+..+|.. ....+.|.-...+.+++ + ...|.||+|.+.|..|..
T Consensus 244 ~g~~~~l~VS~D~G~tf--~~a~fP~~~~~~~ytIldss~~~Vfl~V~~~~~~~~G~Ly~Sds~Gt~F~~ 311 (685)
T 3f6k_A 244 KDTTRRIHVSTDQGDTW--SMAQLPSVGQEQFYSILAANDDMVFMHVDEPGDTGFGTIFTSDDRGIVYSK 311 (685)
T ss_dssp TSSCEEEEEESSTTSSC--EECBSCCBCTTCCEEEEEECSSCEEEEEECTTCCSEEEEEEECTTSCBEEE
T ss_pred CCceEEEEEECcCCcce--eEeeCCCcCccceEEEEcCCCCeEEEEEEccCCCceeEEEEeCCCCCEEEE
Confidence 22689999999976 45544431 11234443344666766 2 234789999999999997
No 13
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=99.38 E-value=6.5e-12 Score=126.65 Aligned_cols=219 Identities=16% Similarity=0.184 Sum_probs=115.9
Q ss_pred ceEEecCCCCCcEEcccCCC-----CCeeeEE--EEEecCCCCEEEE-EEc---------------------CCeEEEEc
Q 036387 93 QPAKSEEALSAWERVYIPVD-----PGVVLLD--IAFVPDDLNHGFL-LGT---------------------RQTLLETK 143 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~p~~-----~~~~l~~--I~~~p~d~~~~~a-vG~---------------------~g~i~~S~ 143 (334)
.+.||+|+|+||+......+ ....+.. +.+.+.+ +++|+ ++. ...+++|+
T Consensus 54 ~~~rS~DgG~TW~~~~~l~~~~~~~~~~~~~~P~~~~d~~~-g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~ 132 (601)
T 1w8o_A 54 LQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRET-GTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATST 132 (601)
T ss_dssp EEEEESSTTSSCCCCEEEECCBCSSSCBEEEEEEEEECTTT-CCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEES
T ss_pred EEEEeCCCCCCCCCCEEEecCccCCCCCccccceEEEECCC-CeEEEEEEeecCCCccccccCCCccCCceEEEEEEEec
Confidence 48899999999986542111 1112222 3333323 45543 321 02589999
Q ss_pred CCCcCeEeCcCCCCcccCccee------EEEEEEeC----CeEEEE-----Ec---CCEEEEEcCCCCCeEEeecCCCCC
Q 036387 144 DGGKTWAPRSIPSAEEEDFNYR------FNSISFKG----KEGWIV-----GK---PAILLHTSDAGESWERIPLSSQLP 205 (334)
Q Consensus 144 DgG~TW~~~~~p~~~~~~~~~~------~~~I~~~~----~~~~~v-----G~---~g~i~~S~DgG~TW~~~~~~~~l~ 205 (334)
|+|+||++.............. -..|...+ +++++. |. ...+++|+|+|+||+...... .
T Consensus 133 D~G~TWs~~~~~~~~~~~~~~~~~~~~~g~gi~~~~~~~~G~l~~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~~~~--~ 210 (601)
T 1w8o_A 133 DGGLTWSHRTITADITPDPGWRSRFAASGEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEAVG--V 210 (601)
T ss_dssp STTSSCEEEECGGGSCCSTTCCEEEECSEECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCBC--S
T ss_pred CCCCCCCCcccccccccCCCeeEEEecCCeEEEccCCCcCceEEEEEEEcCCCCceeEEEEEECCCCcCccCCCCCC--C
Confidence 9999999764211000000110 12333332 344432 21 247899999999999865321 0
Q ss_pred CCcccccccCccccceEeeeeEeecCCEEEEEcC----C--eEEEecCCCcceeeEec--ccc--CCCeeeEEEEe----
Q 036387 206 GDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG----G--GLFLSKGTGITEEFEEV--PVQ--SRGFGILDVGY---- 271 (334)
Q Consensus 206 g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~----g--~i~~S~D~G~tW~w~~~--~~~--~~~~~~~~v~~---- 271 (334)
+ ... . .+.-.++|.+++.... + .+++|.|+|+||+-... .++ .....++.+..
T Consensus 211 ~------~~~----~---~v~~~~dG~l~~~~r~~~~~~~~~~~~S~DgG~tW~~~~~~~~l~~p~~~~s~~~~~~~~~~ 277 (601)
T 1w8o_A 211 G------MDE----N---KTVELSDGRVLLNSRDSARSGYRKVAVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPA 277 (601)
T ss_dssp S------CCS----E---EEEECTTSCEEEEECCTTCCSEEEEEEESSTTSCCCCCEEEEEEECSSCCCEEEESSTTCCT
T ss_pred C------CCc----C---EEEEeCCCEEEEEEeCCCCCCCEEEEEEcCCCCCCCCCeecCcCCCCCccceEEEecccccC
Confidence 1 000 0 1222357778776543 2 68999999999853211 122 11112222100
Q ss_pred -ecCC-eEEEEeC-------CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCe
Q 036387 272 -RSQD-EAWAAGG-------SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDG 327 (334)
Q Consensus 272 -~~~~-~~~~~G~-------~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G 327 (334)
..++ .+++... .+.+++|.|+|+||+....-........++...++++++++-+.+
T Consensus 278 ~~~~~~~l~~~~~~~~~~R~~~~l~~S~D~G~tW~~~~~l~~~~~~Y~~l~~~~dg~i~~~ye~~ 342 (601)
T 1w8o_A 278 GSARAKVLLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPGSMSYSTLTALPDGTYGLLYEPG 342 (601)
T ss_dssp TCSGGGCEEEEEECCSSSSEEEEEEEESSTTSCCCEEEEEEEEECCCEEEEECTTSCEEEEECCS
T ss_pred CCCCCCEEEEECCCCCCcccceEEEEeCCCCCCCCCceEeCCCCCCCCeEEEcCCCeEEEEEecC
Confidence 0112 2333221 257899999999999865311122345577767788888886654
No 14
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=99.17 E-value=1e-10 Score=111.50 Aligned_cols=148 Identities=14% Similarity=0.190 Sum_probs=76.9
Q ss_pred ceEEecCCCC----CcEEcccCCCC---CeeeE--EEEEecCCCCEEEE-EEcC------------------CeEEEEcC
Q 036387 93 QPAKSEEALS----AWERVYIPVDP---GVVLL--DIAFVPDDLNHGFL-LGTR------------------QTLLETKD 144 (334)
Q Consensus 93 ~i~~S~DgG~----tW~~~~~p~~~---~~~l~--~I~~~p~d~~~~~a-vG~~------------------g~i~~S~D 144 (334)
.+.+|+|+|+ ||+........ ...+. .+.+.+.+ +++|+ ++.. -.+++|+|
T Consensus 55 ~~~rS~D~G~~~~~tW~~~~~~~~~~~~~~~~~~P~~v~d~~~-g~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D 133 (382)
T 1so7_A 55 VLRRGDYDAPTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQT-GTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTD 133 (382)
T ss_dssp EEEEEEEEGGGTEEEECCCEECTTSCCTTEEEEEEEEEECTTT-CCEEEEEEEEESSCCHHHHHCTTCCCCEEEEEEESS
T ss_pred EEEEeeeCCccccceeCCcEEeccCCCCCCccccceEEEECCC-CcEEEEEEEecCCCccceeecCCCCccEEEEEEEcC
Confidence 3789999999 99865432211 12222 23343322 44543 3210 14899999
Q ss_pred CCcCeEeCc-CCCCc-cc-Cccee-E-----EEEEEeC--CeEEEE-------------EcCCEEEEEcCCCCCeEEeec
Q 036387 145 GGKTWAPRS-IPSAE-EE-DFNYR-F-----NSISFKG--KEGWIV-------------GKPAILLHTSDAGESWERIPL 200 (334)
Q Consensus 145 gG~TW~~~~-~p~~~-~~-~~~~~-~-----~~I~~~~--~~~~~v-------------G~~g~i~~S~DgG~TW~~~~~ 200 (334)
+|+||++.. ++... .. ..... + ..|...+ .++++. .....+++|+|+|+||+....
T Consensus 134 gG~TW~~~~~l~~~~~g~~~~~~~~~~~~pg~gi~l~~~~G~lv~p~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~~~~ 213 (382)
T 1so7_A 134 HGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLNDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHF 213 (382)
T ss_dssp TTSSCCCCEECHHHHHGGGGGGEEEEEECSSCCEECCSTTCCEEEEEEEEECCSSSSCCEEEEEEEEESSTTSSCEECCC
T ss_pred CCCcCCCCccCChhhcCCCCCCceeeccCCCcEeecccCCCcEEEEEEEecccccccCCCceeEEEEECCCCceeEcCcc
Confidence 999998742 21110 00 00110 0 1233333 455542 123579999999999998653
Q ss_pred CCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc--C--CeEEEecCCCccee
Q 036387 201 SSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR--G--GGLFLSKGTGITEE 253 (334)
Q Consensus 201 ~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~--g~i~~S~D~G~tW~ 253 (334)
++.. +. ...+..+....++.+++... . ..+++|.|+|+||+
T Consensus 214 ---~~~~-----~~----~~~~~~~~~~~dg~l~~~~r~~~g~~~v~~S~D~G~tW~ 258 (382)
T 1so7_A 214 ---VAQD-----TL----ECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQ 258 (382)
T ss_dssp ---CSBS-----EE----EEEEEEEEC--CEEEEEEEEESSSEEEEEEESSTTSSCC
T ss_pred ---cCCC-----CC----ccEEEEEEECCCCEEEEEEecCCCCEEEEEEcCCCCCCC
Confidence 1200 00 00111111124667776543 2 35899999999985
No 15
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=99.15 E-value=2.5e-09 Score=109.29 Aligned_cols=177 Identities=16% Similarity=0.221 Sum_probs=94.5
Q ss_pred eEEEEcCCCcCeEeCc-CCCCcccCcceeE----EEEEEe-CCeEEEEEc---CCEEEEEcCCCCCeEEeecCCCCCCCc
Q 036387 138 TLLETKDGGKTWAPRS-IPSAEEEDFNYRF----NSISFK-GKEGWIVGK---PAILLHTSDAGESWERIPLSSQLPGDM 208 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~~-~p~~~~~~~~~~~----~~I~~~-~~~~~~vG~---~g~i~~S~DgG~TW~~~~~~~~l~g~~ 208 (334)
.+++|+|+|+||++.. ++..........+ ..|.+. +.++++... ...+++|+|+|+||+..... .++..
T Consensus 449 ~v~rS~DgG~TWs~p~~l~~~~~~~~~~~~~~pg~GI~~~~~GrLv~p~~~~~~s~v~~S~DgG~TW~~~~~~--~p~~~ 526 (686)
T 2jkb_A 449 AMTTSQNRGESWEQFKLLPPFLGEKHNGTYLCPGQGLALKSSNRLIFATYTSGELTYLISDDSGQTWKKSSAS--IPFKN 526 (686)
T ss_dssp EEEEESSTTSCCCCCEECCCSSCTTSCCCEECSEECEECTTSSCEEEEEEETTEEEEEEESSTTSSCEEEEEE--CSCSS
T ss_pred EEEEECCCCCcCCCCeecccccCcccceeeeCCCcceEEccCCeEEEEEecCCcEEEEEECCCCCeeEeCccc--CCCCC
Confidence 4788999999998753 2221111000001 233332 456665432 25799999999999998642 12111
Q ss_pred ccccccCccccceEeeeeEeecCCEEEEEcC--C--eEEEecCCCcceeeEec-c-ccCC--C--eeeEEEEeecCCeEE
Q 036387 209 AFWQPHNRAVARRIQNMGWRADGGLWLLVRG--G--GLFLSKGTGITEEFEEV-P-VQSR--G--FGILDVGYRSQDEAW 278 (334)
Q Consensus 209 ~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~--g--~i~~S~D~G~tW~w~~~-~-~~~~--~--~~~~~v~~~~~~~~~ 278 (334)
.. .. ..+...++|.+++.... + .+++|.|+|+||+-... + ++.. + ..++......++..+
T Consensus 527 ~~---~e-------~~ivel~dG~L~~~~R~~~G~~~v~~S~DgG~TWs~~~~~~~L~~p~~g~~~sii~~~~l~dG~~~ 596 (686)
T 2jkb_A 527 AT---AE-------AQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSKVSYIDGIQQTSYGTQVSAIKYSQLIDGKEA 596 (686)
T ss_dssp CC---CC-------EEEEEEETTEEEEEECCSSSSCEEEEESSTTSSCCCCEECSSCCCCSSCCCCEEEEEEEEETTEEE
T ss_pred Cc---ee-------eEEEEecCCEEEEEEEcCCCcEeEEEeCCCCCCCccccccccCcCCCCceeEEEEEeeecCCCCEE
Confidence 00 00 01222467778776632 2 48999999999853321 1 2211 1 112211112344432
Q ss_pred -EE-eC-------CCcEE----EEcCCCcCcEEcccCCCc--ccceeEEEEeeCCeEEEEeCC
Q 036387 279 -AA-GG-------SGVLL----KTTNGGKTWIREKAADNI--AANLYSVKFINEKKGFVLGND 326 (334)
Q Consensus 279 -~~-G~-------~G~i~----~S~DgG~tW~~~~~~~~~--~~~l~~i~~~~~~~~~a~G~~ 326 (334)
+. .. .+.|+ +|.|+|+||+........ .....++...++++++++=+.
T Consensus 597 ll~s~p~~~~~R~~~~l~~S~~~S~D~G~TW~~~~~i~~~~~~~~Ys~l~~~~DG~i~ilye~ 659 (686)
T 2jkb_A 597 VILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAYSAITELPNHHIGVLFEK 659 (686)
T ss_dssp EEEEEECCSSSSBCEEEEEEEECTTTCCEEEEEEEESSCTTSBCCSEEEEECTTSCEEEEEEC
T ss_pred EEEECCCCCCcceeeEEEEEEEeccCCCCcccCCeeecCCCCCccccEEEEeCcCEEEEEEeC
Confidence 22 11 25666 357999999987553221 134467777778888777544
No 16
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=99.03 E-value=2.7e-08 Score=94.10 Aligned_cols=201 Identities=12% Similarity=0.048 Sum_probs=98.5
Q ss_pred cceEEecCCCCCcEEccc-CC-CCCeeeE---EEEEecC-----CCCEEEEEEc---------CCeEEEEcCCCcCeEeC
Q 036387 92 EQPAKSEEALSAWERVYI-PV-DPGVVLL---DIAFVPD-----DLNHGFLLGT---------RQTLLETKDGGKTWAPR 152 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~-p~-~~~~~l~---~I~~~p~-----d~~~~~avG~---------~g~i~~S~DgG~TW~~~ 152 (334)
..|+||+|+|+||+.+.. +. ..+..+. .+...|. ...++++++. ...+++|+|+|+||+.+
T Consensus 52 ~~v~rS~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~ 131 (355)
T 3a72_A 52 FPIYRSKDHGKTWNEISRVHDTVNGYGLRYQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFV 131 (355)
T ss_dssp EEEEEESSTTSCCEEEEEECCTTTSSCEEEEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEE
T ss_pred EEEEEEcCCCcCcCCCcccCCCcCCcccccCCcEEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccC
Confidence 359999999999998752 11 1111221 2233330 1244454432 12389999999999986
Q ss_pred cC------CCCcccCcceeEEEEEEeCCeEEEEE--c-----CC---EEEEEcCCCCCeEEeecCCCCCCCcccccccCc
Q 036387 153 SI------PSAEEEDFNYRFNSISFKGKEGWIVG--K-----PA---ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNR 216 (334)
Q Consensus 153 ~~------p~~~~~~~~~~~~~I~~~~~~~~~vG--~-----~g---~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~ 216 (334)
.. +..........---+...++++++.- . .+ .+.+|+| |+||+.+.... ...... ..
T Consensus 132 ~~i~~~~~~~~~~g~~~v~eP~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~S~D-G~TWs~~~~~~-~~~~~~----~r- 204 (355)
T 3a72_A 132 SHIAAGGEARPNNGLTPVWEPFLLANKGKLICYYSDQRDNATYGQTMVHQVTND-LKNWGPVVEDV-TYPTYT----DR- 204 (355)
T ss_dssp EEEEEESCSSCCTTCCCEEEEEEEEETTEEEEEEEECCCTTTCSCEEEEEEESS-SSSCCCCEEEE-CCSSTT----CE-
T ss_pred ccccccCccccccCCCccccceEEccCCeEEEEECCCCCCCCCCcEEEEEECCC-CCCCCCCeecc-ccCccC----CC-
Confidence 43 11000000000001122345555431 1 12 2247899 89997654211 010000 00
Q ss_pred cccceEeeeeEeecCCEEEEEcC-------C----eEEEecCCCcceeeEe---ccccC----CCeeeEEEEee--cCCe
Q 036387 217 AVARRIQNMGWRADGGLWLLVRG-------G----GLFLSKGTGITEEFEE---VPVQS----RGFGILDVGYR--SQDE 276 (334)
Q Consensus 217 ~~~~~i~~~~~~~~g~~~~~~~~-------g----~i~~S~D~G~tW~w~~---~~~~~----~~~~~~~v~~~--~~~~ 276 (334)
...-.+.-.++|.++++-+. + ..++..|+|++|.... +..+. .+...+..... .+++
T Consensus 205 ---pg~p~v~~l~dG~l~l~y~~~~~~~~~~~~~~~~~~iS~DG~tw~~~~~~~~~~~~~~~~~g~p~v~~~~~gg~~g~ 281 (355)
T 3a72_A 205 ---PGMPVVTKLPNGQYFYVYEYGSFFGTETYSFPLYYRLSSDPENIASAPGQRLVVSSGTQPTSSPYAVWTPYGGENGT 281 (355)
T ss_dssp ---EEEEEEEECTTSCEEEEEEEEBCTTSSSCBCBEEEEEESSTTCCTTSCCEECCBTTCCCCBSSCEEEEESTTSTTCE
T ss_pred ---CCceEEEECCCCCEEEEEEECCCcccCCCceeEEEEECCCcccccCcCCcceecCCCcccCCCCeEEECcCCCCCCe
Confidence 00111222467776654221 1 2344445588874221 11111 11222332211 2457
Q ss_pred EEEEeC-CCcEEEEcCCC-cCcEEcccC
Q 036387 277 AWAAGG-SGVLLKTTNGG-KTWIREKAA 302 (334)
Q Consensus 277 ~~~~G~-~G~i~~S~DgG-~tW~~~~~~ 302 (334)
+++.+. ...||.++|+| .+|+.+..+
T Consensus 282 ll~s~~~~~~v~~s~~~g~~~W~~~~~~ 309 (355)
T 3a72_A 282 IIVSSGTQGTLFINKALGEGEWTEIPCP 309 (355)
T ss_dssp EEEECSSCSSEEEESSTTCSCBEEECCS
T ss_pred EEEEcCCCcEEEEECCCCCCCCeECCCC
Confidence 777764 56799999999 999999874
No 17
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=99.03 E-value=1.9e-08 Score=95.48 Aligned_cols=221 Identities=10% Similarity=0.071 Sum_probs=106.4
Q ss_pred cceEEecCCCCCcEEccc-C-CCCCeeeE---EEEEecC-----CCCEEEEEEc---------CCeEEEEcCCCcCeEeC
Q 036387 92 EQPAKSEEALSAWERVYI-P-VDPGVVLL---DIAFVPD-----DLNHGFLLGT---------RQTLLETKDGGKTWAPR 152 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~-p-~~~~~~l~---~I~~~p~-----d~~~~~avG~---------~g~i~~S~DgG~TW~~~ 152 (334)
..|+||+|+|+||+.+.. . ...+..+. .+...|. ...++++++. .-.+++|+|+|+||+..
T Consensus 57 ~~v~rS~DgG~TW~~~~~v~~~~~g~~~~~~P~l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~ 136 (367)
T 2ydt_A 57 FPIVKSKDGGKTWKEISKVKDTQNNWGLRYQPQLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFV 136 (367)
T ss_dssp EEEEEESSTTSSCEEEEEECCCSSSSCEEEEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEE
T ss_pred EEEEEECCCCcCcCcCcccCCCCCCcccccCCeEEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCC
Confidence 359999999999998742 1 11111111 1233331 0245554421 12389999999999976
Q ss_pred cC------CCCcccCcceeEEEE-EEeCCeEEEE--Ec-----CCEE---EEEcCCCCCeEEeecCCCCCCCcccccccC
Q 036387 153 SI------PSAEEEDFNYRFNSI-SFKGKEGWIV--GK-----PAIL---LHTSDAGESWERIPLSSQLPGDMAFWQPHN 215 (334)
Q Consensus 153 ~~------p~~~~~~~~~~~~~I-~~~~~~~~~v--G~-----~g~i---~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~ 215 (334)
.. +........ ...-+ ...++++++. .+ .+.+ ..|+| |+||+.+......+ .+ ..
T Consensus 137 ~~i~~g~~~~~~~g~~~-v~eP~~~~~~G~l~v~~~d~~~~~~~~q~l~~~~S~D-G~TWs~~~~~~~~~---~~---~~ 208 (367)
T 2ydt_A 137 SHVALGGEALPNPGLTP-VWEPFLMTYKEKLILYYSDQRDNATHSQKLVHQTTTD-LKKWSKVVDDTKYA---NY---YA 208 (367)
T ss_dssp EEEEEESCSSCCTTCCC-EEEEEEEEETTEEEEEEEECCSTTTCSSEEEEEEESS-SSSCCCCEEEECCS---ST---TC
T ss_pred eecccCCCcccccCCCc-cccceEECCCCcEEEEECCCCCCCCCCcEEEEEECCC-CCCCCCceeccccC---Cc---CC
Confidence 42 100000000 00111 1234454432 11 1323 48899 79998754211000 00 00
Q ss_pred ccccceEeeeeEeecCCEEEEEcC-------------C-eEEEecCCCcceeeEe-cccc--C----CCeeeEEEEe--e
Q 036387 216 RAVARRIQNMGWRADGGLWLLVRG-------------G-GLFLSKGTGITEEFEE-VPVQ--S----RGFGILDVGY--R 272 (334)
Q Consensus 216 ~~~~~~i~~~~~~~~g~~~~~~~~-------------g-~i~~S~D~G~tW~w~~-~~~~--~----~~~~~~~v~~--~ 272 (334)
+ ...-.+...++|.++++-+. . ..++..|+|.+|.... ..+. . .+...+.... .
T Consensus 209 r---pg~p~v~~l~dG~l~~~y~~~~~~~~~~~~~~~~~~~~~~S~DG~tw~~~~~~~l~~~~~~~~~~sp~v~~~p~~~ 285 (367)
T 2ydt_A 209 R---PGMPTVAKLPNNEYIYVYEYGGGPNPPAGSDYWFPVYYRLSKDPQKFLNKAHHQIVSNDGTTPAGSPYVVWTPYGG 285 (367)
T ss_dssp E---EEEEEEEECTTSCEEEEEEEETCSCCCTTCSCCCBEEEEEESSTTCCTTSCCEECCCTTCCCCBSSCEEEEESTTS
T ss_pred C---CCcceEEECCCCcEEEEEEecCCCCcccccccccceEEEEcCCccccCCcCCceeecCCCcccCcCceEEECcCCC
Confidence 0 01111223467776665321 1 2345556688875332 1111 1 1111222211 1
Q ss_pred cCCeEEEEeCCC-cEEEEcCCCc--CcEEcccCCCcccceeEEEEee--CCeEEEEe
Q 036387 273 SQDEAWAAGGSG-VLLKTTNGGK--TWIREKAADNIAANLYSVKFIN--EKKGFVLG 324 (334)
Q Consensus 273 ~~~~~~~~G~~G-~i~~S~DgG~--tW~~~~~~~~~~~~l~~i~~~~--~~~~~a~G 324 (334)
.++++++++..+ .||.+.|+|+ +|+.+..+.. ..+-..+...+ ...+++.|
T Consensus 286 ~~g~l~~s~~~~~~v~~~~~~g~~~~W~~~~~~~~-~~Ys~~l~~~~~~~~~l~~~~ 341 (367)
T 2ydt_A 286 KNGTIVVSCGTRSEIFTNQALGDASAWKKWDVPQP-TAYTRSLLTFQKDPDLLMIMG 341 (367)
T ss_dssp TTCEEEEECSSCSCEEEESSTTCTTCCEEECCSSC-CCTTCEEEEETTEEEEEEEEE
T ss_pred CCCeEEEEcCCCceEEEECCCCCCCcceeccCCCC-CCCCcceEecCCCCCEEEEec
Confidence 356888776544 6999999999 9999988522 22323344432 33555555
No 18
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=99.02 E-value=7.8e-09 Score=102.48 Aligned_cols=174 Identities=16% Similarity=0.219 Sum_probs=92.3
Q ss_pred eEEEEcCCCcCeEeCc-CCCCc-ccCcceeE----EEEEEeCCeEEEEE----c----CCEEEEEcCCCCCeEEeecCCC
Q 036387 138 TLLETKDGGKTWAPRS-IPSAE-EEDFNYRF----NSISFKGKEGWIVG----K----PAILLHTSDAGESWERIPLSSQ 203 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~~-~p~~~-~~~~~~~~----~~I~~~~~~~~~vG----~----~g~i~~S~DgG~TW~~~~~~~~ 203 (334)
.+.+|+|+|+||.... ++... .......+ ..|...++++++.. . ...+++|+|+|+||+.....
T Consensus 294 ~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~g~G~GI~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~~~~~~-- 371 (523)
T 4fj6_A 294 MLVKSEDDGKTWSEPINITSQVKDPSWYFLLQGPGRGITMQDGTLVFPIQFIDATRVPNAGIMYSKDRGKTWHLHNLA-- 371 (523)
T ss_dssp EEEEESSTTSSCCCCEECHHHHCCTTCSEEEECSEECEECTTSCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCCS--
T ss_pred EEEEcCCCCccCCCCeeecccccCCcceEEecCCCcceEEeCCeEEEEEEEEcCCCCEEEEEEEECCCCCeEEECCCC--
Confidence 3788999999998643 21110 00000111 12333444444321 1 23689999999999985421
Q ss_pred CCCCcccccccCccccceEeeeeEeecCCEEEEE--cC-C--eEEEecCCCcceeeEec---cc--cCCCeeeEEEEeec
Q 036387 204 LPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV--RG-G--GLFLSKGTGITEEFEEV---PV--QSRGFGILDVGYRS 273 (334)
Q Consensus 204 l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~--~~-g--~i~~S~D~G~tW~w~~~---~~--~~~~~~~~~v~~~~ 273 (334)
+. .. .... +.-.++|.+++.. .. + .+++|.|+|+||+-... .+ |.....++.+....
T Consensus 372 -~~--~~-------~e~~---vve~~dG~L~~~~R~~~~g~r~v~~S~D~G~TWt~~~~~~~~L~~P~c~~Sii~~~~~~ 438 (523)
T 4fj6_A 372 -RT--NT-------TEAQ---VAEVEPGVLMLNMRDNRGGSRAVATTKDLGKTWTEHPSSRSALQESVCMASLIKVNAKD 438 (523)
T ss_dssp -EE--TE-------EEEE---EEEEETTEEEEEEEETTCSBCEEEEESSTTSSCEECTTTTTSSBCSSCCCEEEEECGGG
T ss_pred -Cc--cc-------cCCE---EEEecCCEEEEEEEecCCCcEEEEEECCCCCccCcCcCccccCCCCCcccEEEEEeccc
Confidence 10 00 0111 2223577777732 22 3 58999999998742210 12 21112334332111
Q ss_pred ---CCe-EEEEeC-------CCcEEEEcCCCcCcEEcc---cCCCcccceeEEEEeeCCeEEEEeCC
Q 036387 274 ---QDE-AWAAGG-------SGVLLKTTNGGKTWIREK---AADNIAANLYSVKFINEKKGFVLGND 326 (334)
Q Consensus 274 ---~~~-~~~~G~-------~G~i~~S~DgG~tW~~~~---~~~~~~~~l~~i~~~~~~~~~a~G~~ 326 (334)
+.. +++... .+.|+.|.|+|+||+... ...+......++...+++++.++=+.
T Consensus 439 ~~~g~~~lL~snp~~~~~R~~l~v~~S~D~G~TW~~~~~v~~~~~~~~~Ys~l~~~~dG~i~ilYE~ 505 (523)
T 4fj6_A 439 NITGKDLLLFSNPNTTKGRNHITIKASLDGGLTWPTEHQVLLDEAEGWGYSCLSMIDKETVGIFYES 505 (523)
T ss_dssp STTCSCEEEEEEECCSSSSCCEEEEEESSTTSCCCGGGEEEEECSCCCCCEEEEECSSSEEEEEECC
T ss_pred CCCCCcEEEEEccCCCCccccceEEEeCCCCCCCccCceEEEcCCCCcccceEEEcCCCEEEEEEEc
Confidence 123 333321 357999999999998743 11122345667777788888776443
No 19
>2jkb_A Sialidase B; intramolecular trans-sialidase, lyase, glycosidase, neuraminidase; HET: SKD; 1.54A {Streptococcus pneumoniae} PDB: 2vw2_A* 2vw1_A* 2vw0_A*
Probab=98.96 E-value=3.6e-08 Score=100.76 Aligned_cols=191 Identities=15% Similarity=0.166 Sum_probs=98.5
Q ss_pred cceEEecCCCCCcEEcc-cCCCC--Ceee------EEEEEecCCCCEEEEEEc---CCeEEEEcCCCcCeEeCcCCCCcc
Q 036387 92 EQPAKSEEALSAWERVY-IPVDP--GVVL------LDIAFVPDDLNHGFLLGT---RQTLLETKDGGKTWAPRSIPSAEE 159 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~-~p~~~--~~~l------~~I~~~p~d~~~~~avG~---~g~i~~S~DgG~TW~~~~~p~~~~ 159 (334)
..+++|+|+|+||.... .+... ...+ ..|.+. ...++++... .+.+++|+|+|+||+....+....
T Consensus 448 ~~v~rS~DgG~TWs~p~~l~~~~~~~~~~~~~~pg~GI~~~--~~GrLv~p~~~~~~s~v~~S~DgG~TW~~~~~~~p~~ 525 (686)
T 2jkb_A 448 IAMTTSQNRGESWEQFKLLPPFLGEKHNGTYLCPGQGLALK--SSNRLIFATYTSGELTYLISDDSGQTWKKSSASIPFK 525 (686)
T ss_dssp EEEEEESSTTSCCCCCEECCCSSCTTSCCCEECSEECEECT--TSSCEEEEEEETTEEEEEEESSTTSSCEEEEEECSCS
T ss_pred EEEEEECCCCCcCCCCeecccccCcccceeeeCCCcceEEc--cCCeEEEEEecCCcEEEEEECCCCCeeEeCcccCCCC
Confidence 56899999999998642 11100 0011 233332 2345554432 246899999999999875321100
Q ss_pred cCcceeEEEEEEeCCeEEEEEc--CC--EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE
Q 036387 160 EDFNYRFNSISFKGKEGWIVGK--PA--ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL 235 (334)
Q Consensus 160 ~~~~~~~~~I~~~~~~~~~vG~--~g--~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~ 235 (334)
... ....-+...++++++... .+ .+++|+|+|+||+.......++.... .....+.......++..++
T Consensus 526 ~~~-~e~~ivel~dG~L~~~~R~~~G~~~v~~S~DgG~TWs~~~~~~~L~~p~~-------g~~~sii~~~~l~dG~~~l 597 (686)
T 2jkb_A 526 NAT-AEAQMVELRDGVIRTFFRTTTGKIAYMTSRDSGETWSKVSYIDGIQQTSY-------GTQVSAIKYSQLIDGKEAV 597 (686)
T ss_dssp SCC-CCEEEEEEETTEEEEEECCSSSSCEEEEESSTTSSCCCCEECSSCCCCSS-------CCCCEEEEEEEEETTEEEE
T ss_pred CCc-eeeEEEEecCCEEEEEEEcCCCcEeEEEeCCCCCCCccccccccCcCCCC-------ceeEEEEEeeecCCCCEEE
Confidence 000 112223335677777643 22 59999999999998764332332100 0000111111124555332
Q ss_pred EE--c-------CCeEE----EecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEccc
Q 036387 236 LV--R-------GGGLF----LSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKA 301 (334)
Q Consensus 236 ~~--~-------~g~i~----~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~ 301 (334)
+- . .+.|+ +|.|+|+||+....- .+....+. ..++...+|.|+..-+.|++|+....
T Consensus 598 l~s~p~~~~~R~~~~l~~S~~~S~D~G~TW~~~~~i~~~~~~~~Y---------s~l~~~~DG~i~ilye~g~tW~~~~~ 668 (686)
T 2jkb_A 598 ILSTPNSRSGRKGGQLVVGLVNKEDDSIDWKYHYDIDLPSYGYAY---------SAITELPNHHIGVLFEKYDSWSRNEL 668 (686)
T ss_dssp EEEEECCSSSSBCEEEEEEEECTTTCCEEEEEEEESSCTTSBCCS---------EEEEECTTSCEEEEEECSCSSCTTSC
T ss_pred EEECCCCCCcceeeEEEEEEEeccCCCCcccCCeeecCCCCCccc---------cEEEEeCcCEEEEEEeCCCccccccc
Confidence 21 1 24565 457999987533221 11111111 22344456777777778999997643
No 20
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=98.94 E-value=8.8e-09 Score=100.41 Aligned_cols=184 Identities=16% Similarity=0.188 Sum_probs=89.6
Q ss_pred EEEEcCCCcCeEeCc-CCCCcccC-cce----eEEEEEEeC----CeEEEEE--c------CCEEEEEcCCCCCeEEeec
Q 036387 139 LLETKDGGKTWAPRS-IPSAEEED-FNY----RFNSISFKG----KEGWIVG--K------PAILLHTSDAGESWERIPL 200 (334)
Q Consensus 139 i~~S~DgG~TW~~~~-~p~~~~~~-~~~----~~~~I~~~~----~~~~~vG--~------~g~i~~S~DgG~TW~~~~~ 200 (334)
+++|+|+|+||++.. ++.....+ ..+ .-..|.+.+ +++++.. . ...+++|+|+|+||+....
T Consensus 191 ~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~~~g~Gi~l~~g~~~Grlv~p~~~~~~~g~~~~~v~~S~D~G~tW~~~~~ 270 (449)
T 2bf6_A 191 LVYSDDDGKTWSEPQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNEKGKQSSAVIYSDDSGKNWTIGES 270 (449)
T ss_dssp EEEESSTTSSCCCCEECHHHHCCTTCSCEEECSEECEECCSSTTTTCEEEEEEEECTTCCEEEEEEEESSTTSSCEECCC
T ss_pred EEEEcCCCccCCCCccCccccccccceeecccCCeEEEeccCCcCCEEEEEEEEEcCCCCEEEEEEEECCCCCceeECCc
Confidence 789999999998732 11100000 000 012344332 3555421 1 2479999999999998653
Q ss_pred CCCC----CCCcccc-cccCcc-ccceEeeeeEeecCCEEEEEc--CC--eEEEecCCCcceeeEe---ccccC--CCee
Q 036387 201 SSQL----PGDMAFW-QPHNRA-VARRIQNMGWRADGGLWLLVR--GG--GLFLSKGTGITEEFEE---VPVQS--RGFG 265 (334)
Q Consensus 201 ~~~l----~g~~~~~-~~~~~~-~~~~i~~~~~~~~g~~~~~~~--~g--~i~~S~D~G~tW~w~~---~~~~~--~~~~ 265 (334)
.... .|. .+. .....+ ....-..+...++|.+++... ++ .+++|.|+|+||+-.. ..++. ....
T Consensus 271 ~~~~~~~~~G~-~~~~~~~~~g~~~~~e~~vve~~dG~l~~~~R~~~g~~~v~~S~D~G~TWs~~~~~~~~l~~~~~~~~ 349 (449)
T 2bf6_A 271 PNDNRKLENGK-IINSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSGYLNIATSFDGGATWDETVEKDTNVLEPYCQLS 349 (449)
T ss_dssp TTTTEECTTSC-EECTTTCCCSTTCEEEEEEEECTTSCEEEEEEESSSEEEEEEESSTTSCCCSCCEEEEEEECCSSCCE
T ss_pred cCccccccccc-ccccccccccCCCCCCCEEEEecCCEEEEEEEeCCCCEEEEEECCCCccccCccccccccCCCCcCcc
Confidence 2110 000 000 000000 000001122345778877653 34 4789999999985210 11222 1112
Q ss_pred eEEEEeecCC-eEEEEeC-------CCcEEE-------EcCCCc-----CcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 266 ILDVGYRSQD-EAWAAGG-------SGVLLK-------TTNGGK-----TWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 266 ~~~v~~~~~~-~~~~~G~-------~G~i~~-------S~DgG~-----tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
++......++ .+++++. .+.|+. |.|+|+ +|+....-.+......++...++++++++
T Consensus 350 ~i~~~~~~dg~~~ll~~~p~~~~R~~g~l~l~~s~~~gS~D~G~~~~~~tW~~~~~l~~~~~~Ys~l~~~~dg~i~~l 427 (449)
T 2bf6_A 350 VINYSQKVDGKDAVIFSNPNARSRSNGTVRIGLINQVGTYENGEPKYEFDWKYNKLVKPGYYAYSCLTELSNGNIGLL 427 (449)
T ss_dssp EEECSSCBTTBCEEEEEEECSSSSEEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEEEECCCEEEEECTTSCEEEE
T ss_pred EEEeecccCCceEEEEeCCCCCCCCceEEEEEEecCCccccCCccccccCcccceEeCCCCccCCeeEEcCCCEEEEE
Confidence 2221101233 2344332 366766 689999 99864331122345567766677777665
No 21
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=98.91 E-value=1.9e-07 Score=95.23 Aligned_cols=177 Identities=13% Similarity=0.128 Sum_probs=92.3
Q ss_pred EEEEcCCCcCeEeCc-CCCCcccCcceeE----EEEEEeC----CeEEEEE-----cCCEEEEEcCCCCCeEEeecCCCC
Q 036387 139 LLETKDGGKTWAPRS-IPSAEEEDFNYRF----NSISFKG----KEGWIVG-----KPAILLHTSDAGESWERIPLSSQL 204 (334)
Q Consensus 139 i~~S~DgG~TW~~~~-~p~~~~~~~~~~~----~~I~~~~----~~~~~vG-----~~g~i~~S~DgG~TW~~~~~~~~l 204 (334)
+.+|+|+|+||++.. ++..........+ ..|...+ .++++.. ....+++|+|+|+||+..... .
T Consensus 430 v~~S~DgG~TWs~p~~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~~~s~i~~SdDgG~TW~~~~~~--~ 507 (679)
T 2sli_A 430 MRYSDDEGASWSDLDIVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSSAELGFMYSDDHGDNWTYVEAD--N 507 (679)
T ss_dssp EEEESSTTSSCCCCEECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESSCSEEEEEESSTTSSCEEEECC--C
T ss_pred EEEeCCCCccCCCCcccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCCCEEEEEEECCCCCceEeCccC--C
Confidence 568999999998653 2211110000001 1344433 4555432 245799999999999997643 1
Q ss_pred CCCcccccccCccccceEeeeeEeecCCEEEEEcC--C--eEEEecCCCcceeeEec--cccCC--C--eeeEEEEeecC
Q 036387 205 PGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG--G--GLFLSKGTGITEEFEEV--PVQSR--G--FGILDVGYRSQ 274 (334)
Q Consensus 205 ~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~--g--~i~~S~D~G~tW~w~~~--~~~~~--~--~~~~~v~~~~~ 274 (334)
+... .... . .+...++|.+++.... | .+++|.|+|+||+-... .++.. . ..++......+
T Consensus 508 p~~~---~~~e----~---~vve~~dG~L~~~~R~~~G~~~v~~S~DgG~TWt~~~~~~~L~~p~~g~~~s~i~~~~~~d 577 (679)
T 2sli_A 508 LTGG---ATAE----A---QIVEMPDGSLKTYLRTGSNCIAEVTSIDGGETWSDRVPLQGISTTSYGTQLSVINYSQPID 577 (679)
T ss_dssp CCSC---CCCC----E---EEEECTTSCEEEEECCSSSSCEEEEESSTTSSCCCCEECTTCCCCSSCCCCEEEEEEEEET
T ss_pred CCCC---Cccc----e---EEEEeCCCEEEEEEEeCCCCEEEEEEcCCCcCCCCCccccCCCCCCCceeEEEEEeeecCC
Confidence 2111 0110 0 1222456788876642 3 48999999999853221 12211 1 12222211223
Q ss_pred Ce-EEEEeC--------CCcEEE--EcCCC--------cCcEEcccCCCc--ccceeEEEEeeCCeEEEEeCCe
Q 036387 275 DE-AWAAGG--------SGVLLK--TTNGG--------KTWIREKAADNI--AANLYSVKFINEKKGFVLGNDG 327 (334)
Q Consensus 275 ~~-~~~~G~--------~G~i~~--S~DgG--------~tW~~~~~~~~~--~~~l~~i~~~~~~~~~a~G~~G 327 (334)
++ +++... .+.++. |.|+| ++|+........ .....++...++++++++=+.|
T Consensus 578 Gr~vll~~~p~~~~~R~~~~l~ls~S~D~G~t~~~~~~~tW~~~~~i~~g~~~~~Ys~L~~~~DG~l~llye~g 651 (679)
T 2sli_A 578 GKPAIILSSPNATNGRKNGKIWIGLVNDTGNTGIDKYSVEWKYSYAVDTPQMGYSYSCLAELPDGQVGLLYEKY 651 (679)
T ss_dssp TEEEEEEEEECCSSSSBCEEEEEEEEEECSCCGGGSEEEEEEEEEESSCTTSBCCCEEEEECSSSCEEEEEECS
T ss_pred CCEEEEEEcCCCCCceeeEEEEEEEEcCCCccccccccCCcccceeecCCCCCccCceEEEeCCCEEEEEEECC
Confidence 43 233321 245554 45999 899876432111 1234567667788887765443
No 22
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=98.82 E-value=1.3e-07 Score=90.33 Aligned_cols=167 Identities=13% Similarity=0.033 Sum_probs=88.9
Q ss_pred eEEEEcCCCcCeEeC-cCCCCccc-C-cce---eEEEEEEeCCeEEEEEcCCEEEEEcC--CCCCeEEeecCCCCCCCcc
Q 036387 138 TLLETKDGGKTWAPR-SIPSAEEE-D-FNY---RFNSISFKGKEGWIVGKPAILLHTSD--AGESWERIPLSSQLPGDMA 209 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~-~~p~~~~~-~-~~~---~~~~I~~~~~~~~~vG~~g~i~~S~D--gG~TW~~~~~~~~l~g~~~ 209 (334)
.+.+|+|+|+||+.. .++..... . ..+ .-..|...++++++... ..+++|+| +|+||+..... +..
T Consensus 154 ~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~~~g~gI~l~dGrLv~p~~-~~~~~S~D~~~G~tW~~~~~~---~~~-- 227 (386)
T 2xzi_A 154 YLTESRDDGNTWSKPVDLTKELTPDGWAWDAVGPGNGIRLTTGELVIPAM-GRNIIGRGAPGNRTWSVQRLS---GAG-- 227 (386)
T ss_dssp EEEEESSTTSCCCCCEECHHHHSCTTCCSCCBCSSCCEECTTSCEEEEET-TEEEEEESSTTSCEEEEEECT---TCC--
T ss_pred EEEEECCCCccCCCcccCccccccccceeeccCCccEEEecCCEEEEEeE-EEEEEccCCCCCCcccccCcC---CCC--
Confidence 377899999999853 22110000 0 000 01234444566666555 77899999 99999975432 110
Q ss_pred cccccCccccceEeeeeEeecCCEEEEEcC-----CeEEEecCCCcceeeEe--cccc--CCCeeeEEEEeecCCeEEEE
Q 036387 210 FWQPHNRAVARRIQNMGWRADGGLWLLVRG-----GGLFLSKGTGITEEFEE--VPVQ--SRGFGILDVGYRSQDEAWAA 280 (334)
Q Consensus 210 ~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~-----g~i~~S~D~G~tW~w~~--~~~~--~~~~~~~~v~~~~~~~~~~~ 280 (334)
. ... +.-..+|.+++.... ..+++|.| +||+-.. ..++ .....++.+.......+++.
T Consensus 228 ----~----e~~---vve~~dG~L~~~~r~~~g~~r~v~~S~D--~tWt~~~~~~~l~~~~~~~~~i~~~~~~~~~ll~~ 294 (386)
T 2xzi_A 228 ----A----EGT---IVQTPDGKLYRNDRPSQKGYRMVARGTL--EGFGAFAPDAGLPDPACQGSVLRYNSDAPARTIFL 294 (386)
T ss_dssp ----S----SEE---EEECTTSCEEEEECCSSSEEEEEEEEET--TEECCCEEEEEEEECSCCCEEEEEESSSSCEEEEE
T ss_pred ----C----cCE---EEEeCCCcEEEEEeCCCCccEEEEEEeC--CccCcccccCCCCCCCCccEEEEecCCCCCEEEEE
Confidence 0 001 222356788776532 24889999 8774221 1121 11123343332222333333
Q ss_pred e-------CCCcEEEEcCC-CcCcEEcccCCCcc-------cceeEEEEeeCCeEEEE
Q 036387 281 G-------GSGVLLKTTNG-GKTWIREKAADNIA-------ANLYSVKFINEKKGFVL 323 (334)
Q Consensus 281 G-------~~G~i~~S~Dg-G~tW~~~~~~~~~~-------~~l~~i~~~~~~~~~a~ 323 (334)
. ..+.+++|+|+ |+||+....-...+ ....++...++++++++
T Consensus 295 ~p~~~~~R~~l~l~~S~D~~G~tW~~~~~~~~g~~~~~~~~~~ys~l~~~~dg~l~~l 352 (386)
T 2xzi_A 295 NSASGTSRRAMRVRISYDADAKKFNYGRKLEDAKVSGAGHEGGYSSMTKTGDYKIGAL 352 (386)
T ss_dssp EECSSSCSCCEEEEEECSTTCCCCCCCEEGGGGCCSSSCEEEEEEEEEECTTSCEEEE
T ss_pred CCCCCCCCcceEEEEEcCCCCCccCCceEEecCCccccCCceEeceeEECCCCEEEEE
Confidence 2 23678999999 99998754421111 23445555667777665
No 23
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=98.82 E-value=1e-07 Score=93.45 Aligned_cols=182 Identities=16% Similarity=0.237 Sum_probs=88.2
Q ss_pred EEEEcCCCcCeEeCc-CCCCcccC-cce----eEEEEEEeC----CeEEEE--Ec----------CCEEEEEcCCCCCeE
Q 036387 139 LLETKDGGKTWAPRS-IPSAEEED-FNY----RFNSISFKG----KEGWIV--GK----------PAILLHTSDAGESWE 196 (334)
Q Consensus 139 i~~S~DgG~TW~~~~-~p~~~~~~-~~~----~~~~I~~~~----~~~~~v--G~----------~g~i~~S~DgG~TW~ 196 (334)
+.+|+|+|+||++.. ++.....+ ..+ .-..|...+ +++++. .. ...+++|+|+|+||+
T Consensus 218 ~~~S~D~G~TWs~p~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G~TW~ 297 (471)
T 2w20_A 218 MSYSDDDGKTWSAPQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWH 297 (471)
T ss_dssp EEEESSTTSSCCCCEECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTTSSCE
T ss_pred EEEECCCcCcCCCCcccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCCCCcc
Confidence 578999999998643 21100000 001 112344433 455542 11 147899999999999
Q ss_pred EeecCCCC---CCCc----ccccccCccccceEeeeeEeecCCEEEEEc--CC--eEEEecCCCcceeeEec---cccCC
Q 036387 197 RIPLSSQL---PGDM----AFWQPHNRAVARRIQNMGWRADGGLWLLVR--GG--GLFLSKGTGITEEFEEV---PVQSR 262 (334)
Q Consensus 197 ~~~~~~~l---~g~~----~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--~g--~i~~S~D~G~tW~w~~~---~~~~~ 262 (334)
........ .+.. .+........... +.-.++|.+++... .+ .+++|.|+|+||+-... .++..
T Consensus 298 ~~~~v~~~~~~~g~~~~~~~~~~~~~~~~ep~---vve~~dG~L~~~~R~~~G~~~v~~S~DgG~TWs~~~~~~~~l~~~ 374 (471)
T 2w20_A 298 AGEAVNDNRQVDGQKIHSSTMNNRRAQNTEST---VVQLNNGDVKLFMRGLTGDLQVATSKDGGVTWEKDIKRYPQVKDV 374 (471)
T ss_dssp ECCCTTTTEEETTEEECTTTCCCGGGCCCSEE---EEECTTSCEEEEECCSSSEEEEEEESSSSSSCCSCCEEEEEEECC
T ss_pred cCCccCcccccCccccccccccccCcCccCCE---EEEcCCCeEEEEEEeCCCCEEEEEEcCCCcCCCCcccccCccCCc
Confidence 86532100 0000 0000000001111 22235778777653 23 37899999999853211 12211
Q ss_pred CeeeEEEEeecCCe-EEEEeC-------CCcEE---EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 263 GFGILDVGYRSQDE-AWAAGG-------SGVLL---KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 263 ~~~~~~v~~~~~~~-~~~~G~-------~G~i~---~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
......+....++. +++... .+.|+ .|+|+|+||+....-+.......++...++++++++
T Consensus 375 ~~~~s~i~~~~dG~~vll~s~p~~~~r~~~~l~l~~~S~D~G~tW~~~~~i~~~~~~Ys~l~~~~dG~l~ll 446 (471)
T 2w20_A 375 YVQMSAIHTMHEGKEYIILSNAGGPKRENGMVHLARVEENGELTWLKHNPIQKGEFAYNSLQELGNGEYGIL 446 (471)
T ss_dssp SSCCEEEEEEETTEEEEEEEEECSSSSEEEEEEEEEECSSSCEEEEEEEEEEEEECCCEEEEEEETTEEEEE
T ss_pred ccccceEEEccCCCEEEEEecCCCCCCccceEEEEEEcCCCCcccccCCEECCCCccceeeEEcCCCEEEEE
Confidence 00111121122343 333331 24564 389999999865431112234456766677887655
No 24
>2ydt_A EXO-1,5-alpha-L-arabinofuranobiosidase; hydrolase; 1.60A {Gibberella zeae} PDB: 2w5n_A* 2w5o_A* 2ydp_A
Probab=98.69 E-value=8.9e-07 Score=83.94 Aligned_cols=62 Identities=23% Similarity=0.444 Sum_probs=35.7
Q ss_pred eEEEEcCCCcCeEeCcC-CCCcccCcceeEE-EEEE-e-------CCeEEEEEc---------CCEEEEEcCCCCCeEEe
Q 036387 138 TLLETKDGGKTWAPRSI-PSAEEEDFNYRFN-SISF-K-------GKEGWIVGK---------PAILLHTSDAGESWERI 198 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~-~I~~-~-------~~~~~~vG~---------~g~i~~S~DgG~TW~~~ 198 (334)
.|+||+|+|+||+++.. .... ........ .+.. . +.++++.+. .-.+++|+|+|+||+.+
T Consensus 58 ~v~rS~DgG~TW~~~~~v~~~~-~g~~~~~~P~l~~lP~~i~~~~~G~lL~~~~s~~~d~~~~~i~v~~S~D~G~TW~~~ 136 (367)
T 2ydt_A 58 PIVKSKDGGKTWKEISKVKDTQ-NNWGLRYQPQLYELPRAFGKYPKGTVLCSGSSIPSDLSETLIEVYASRDKGYTWEFV 136 (367)
T ss_dssp EEEEESSTTSSCEEEEEECCCS-SSSCEEEEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSSSSCCEEE
T ss_pred EEEEECCCCcCcCcCcccCCCC-CCcccccCCeEEEccccccccCCCcEEEEEecccCCCCCCeEEEEEECCCCCCCcCC
Confidence 58999999999998642 1111 00011101 1111 1 344544421 13699999999999997
Q ss_pred ec
Q 036387 199 PL 200 (334)
Q Consensus 199 ~~ 200 (334)
..
T Consensus 137 ~~ 138 (367)
T 2ydt_A 137 SH 138 (367)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 25
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=98.68 E-value=1.5e-07 Score=94.64 Aligned_cols=157 Identities=18% Similarity=0.195 Sum_probs=79.9
Q ss_pred eEEEEcCCCcCeEeCcCCCCcc-cCcceeEE--EEEEe--CCeEEEE-Ec---------------------CCEEEEEcC
Q 036387 138 TLLETKDGGKTWAPRSIPSAEE-EDFNYRFN--SISFK--GKEGWIV-GK---------------------PAILLHTSD 190 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~~~p~~~~-~~~~~~~~--~I~~~--~~~~~~v-G~---------------------~g~i~~S~D 190 (334)
.+.+|+|+|+||+......... ......+. .+.++ ++++|+. +. ...+++|+|
T Consensus 54 ~~~rS~DgG~TW~~~~~l~~~~~~~~~~~~~~P~~~~d~~~g~i~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~S~D 133 (601)
T 1w8o_A 54 LQRRSTDGGRTWGEQQVVSAGQTTAPIKGFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTD 133 (601)
T ss_dssp EEEEESSTTSSCCCCEEEECCBCSSSCBEEEEEEEEECTTTCCEEEEEEEESSCCTTTCCSCCCTTCTTSCEEEEEEESS
T ss_pred EEEEeCCCCCCCCCCEEEecCccCCCCCccccceEEEECCCCeEEEEEEeecCCCccccccCCCccCCceEEEEEEEecC
Confidence 4789999999998764211100 00011122 23333 3566643 21 027899999
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee---cCCEEEEE---c-----CCeEEEecCCCcceeeEeccc
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA---DGGLWLLV---R-----GGGLFLSKGTGITEEFEEVPV 259 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~---~g~~~~~~---~-----~g~i~~S~D~G~tW~w~~~~~ 259 (334)
+|+||+......+..... -|.....+ ....+.... .|.+++.. . ...+++|+|+|+||+.... +
T Consensus 134 ~G~TWs~~~~~~~~~~~~-~~~~~~~~---~g~gi~~~~~~~~G~l~~~~~~~~g~~~~~~~~~~S~D~G~TW~~~~~-~ 208 (601)
T 1w8o_A 134 GGLTWSHRTITADITPDP-GWRSRFAA---SGEGIQLRYGPHAGRLIQQYTIINAAGAFQAVSVYSDDHGRTWRAGEA-V 208 (601)
T ss_dssp TTSSCEEEECGGGSCCST-TCCEEEEC---SEECEECCSSTTTTCEEEEEEEECTTSCEEEEEEEESSTTSSCEECCC-B
T ss_pred CCCCCCCcccccccccCC-CeeEEEec---CCeEEEccCCCcCceEEEEEEEcCCCCceeEEEEEECCCCcCccCCCC-C
Confidence 999999875321111000 11100000 000111111 25555431 1 2368999999998754332 1
Q ss_pred cCCCeeeEEEEeecCCeEEEEeCC----C--cEEEEcCCCcCcEEcc
Q 036387 260 QSRGFGILDVGYRSQDEAWAAGGS----G--VLLKTTNGGKTWIREK 300 (334)
Q Consensus 260 ~~~~~~~~~v~~~~~~~~~~~G~~----G--~i~~S~DgG~tW~~~~ 300 (334)
... ..-..+.-..++.+++.... + .+++|+|+|+||+...
T Consensus 209 ~~~-~~~~~v~~~~dG~l~~~~r~~~~~~~~~~~~S~DgG~tW~~~~ 254 (601)
T 1w8o_A 209 GVG-MDENKTVELSDGRVLLNSRDSARSGYRKVAVSTDGGHSYGPVT 254 (601)
T ss_dssp CSS-CCSEEEEECTTSCEEEEECCTTCCSEEEEEEESSTTSCCCCCE
T ss_pred CCC-CCcCEEEEeCCCEEEEEEeCCCCCCCEEEEEEcCCCCCCCCCe
Confidence 111 11123333456677775432 3 6899999999999874
No 26
>3a72_A EXO-arabinanase; arabinase, glycosyl hydrolase, hydrolase; HET: AHR; 1.04A {Penicillium chrysogenum} PDB: 3a71_A*
Probab=98.65 E-value=1.1e-06 Score=82.91 Aligned_cols=62 Identities=21% Similarity=0.424 Sum_probs=35.9
Q ss_pred eEEEEcCCCcCeEeCcC-CCCcccCcceeEE-EEEE-e-------CCeEEEEEc---------CCEEEEEcCCCCCeEEe
Q 036387 138 TLLETKDGGKTWAPRSI-PSAEEEDFNYRFN-SISF-K-------GKEGWIVGK---------PAILLHTSDAGESWERI 198 (334)
Q Consensus 138 ~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~-~I~~-~-------~~~~~~vG~---------~g~i~~S~DgG~TW~~~ 198 (334)
.|++|+|+|+||+++.. .... ........ .+.. . +.++++++. ...+++|+|+|+||+.+
T Consensus 53 ~v~rS~DgG~TW~~~~~v~~~~-~g~~~~~~P~l~~lp~~v~~~~~G~ll~~~~~~~~d~~~~~~~v~~S~D~G~TW~~~ 131 (355)
T 3a72_A 53 PIYRSKDHGKTWNEISRVHDTV-NGYGLRYQPFLYSLPERVGSFKKGTLLLAGSSIPTDLSSTDIVLYASQDDGMTWDFV 131 (355)
T ss_dssp EEEEESSTTSCCEEEEEECCTT-TSSCEEEEEEEEECSSCBTTBCTTCEEEEEEECCTTCCCEEEEEEEESSTTSCCEEE
T ss_pred EEEEEcCCCcCcCCCcccCCCc-CCcccccCCcEEecCcccccCCCCcEEEEEeeecCCCCCceEEEEEECCCCccCccC
Confidence 58999999999998642 1111 00011101 1111 1 334444432 12599999999999998
Q ss_pred ec
Q 036387 199 PL 200 (334)
Q Consensus 199 ~~ 200 (334)
..
T Consensus 132 ~~ 133 (355)
T 3a72_A 132 SH 133 (355)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 27
>1so7_A Sialidase 2; neuraminidase, ganglioside, sugar-induced form; 1.49A {Homo sapiens} SCOP: b.68.1.1 PDB: 1snt_A 1vcu_A* 2f0z_A* 2f10_A* 2f11_A* 2f12_A* 2f13_A* 2f28_A 2f29_A* 2f24_A 2f25_A* 2f26_A 2f27_A*
Probab=98.61 E-value=5.7e-08 Score=92.39 Aligned_cols=60 Identities=20% Similarity=0.122 Sum_probs=36.3
Q ss_pred CeEEEecCCCcceeeEeccccCC--CeeeEEEEeecCCeEEEEeC--C--CcEEEEcCCCcCcEEcc
Q 036387 240 GGLFLSKGTGITEEFEEVPVQSR--GFGILDVGYRSQDEAWAAGG--S--GVLLKTTNGGKTWIREK 300 (334)
Q Consensus 240 g~i~~S~D~G~tW~w~~~~~~~~--~~~~~~v~~~~~~~~~~~G~--~--G~i~~S~DgG~tW~~~~ 300 (334)
..+++|+|+|+||+.... ++.. ...+..+....++.+++... . ..+++|+|+|+||+...
T Consensus 196 ~~~~~S~D~G~tW~~~~~-~~~~~~~~~~~~~~~~~dg~l~~~~r~~~g~~~v~~S~D~G~tW~~~~ 261 (382)
T 1so7_A 196 AFCFLSHDHGRTWARGHF-VAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQ 261 (382)
T ss_dssp EEEEEESSTTSSCEECCC-CSBSEEEEEEEEEEC--CEEEEEEEEESSSEEEEEEESSTTSSCCCCE
T ss_pred eEEEEECCCCceeEcCcc-cCCCCCccEEEEEEECCCCEEEEEEecCCCCEEEEEEcCCCCCCCCCE
Confidence 458999999999854432 2211 11122222224566766532 2 35799999999999875
No 28
>2sli_A Intramolecular trans-sialidase; hydrolase, neuraminidase; HET: SKD; 1.80A {Macrobdella decora} SCOP: b.29.1.9 b.68.1.1 PDB: 1sll_A 1sli_A* 3sli_A* 4sli_A*
Probab=98.57 E-value=1.9e-06 Score=87.94 Aligned_cols=106 Identities=10% Similarity=0.074 Sum_probs=60.3
Q ss_pred ceEEecCCCCCcEEccc-CC--CCC--e----eeEEEEEe-cCCCCEEEEEE-----cCCeEEEEcCCCcCeEeCcCCCC
Q 036387 93 QPAKSEEALSAWERVYI-PV--DPG--V----VLLDIAFV-PDDLNHGFLLG-----TRQTLLETKDGGKTWAPRSIPSA 157 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~-p~--~~~--~----~l~~I~~~-p~d~~~~~avG-----~~g~i~~S~DgG~TW~~~~~p~~ 157 (334)
.+.+|+|+|+||..... +. .+. . .-..|... +.+..++++.. ....+++|+|+|+||+....+..
T Consensus 429 ~v~~S~DgG~TWs~p~~l~~~~~~~~~~~~~gpG~gI~l~d~~~~GrLv~p~~~~~~~~s~i~~SdDgG~TW~~~~~~~p 508 (679)
T 2sli_A 429 AMRYSDDEGASWSDLDIVSSFKPEVSKFLVVGPGIGKQISTGENAGRLLVPLYSKSSAELGFMYSDDHGDNWTYVEADNL 508 (679)
T ss_dssp EEEEESSTTSSCCCCEECGGGCCTTCSEEEECSEECEECCSSTTTTCEEEEEEEESSCSEEEEEESSTTSSCEEEECCCC
T ss_pred EEEEeCCCCccCCCCcccCcccCccccceecCCCceEEecCCCCCCEEEEEEEecCCCEEEEEEECCCCCceEeCccCCC
Confidence 47799999999986431 11 100 0 01233332 01124555432 23468999999999998764321
Q ss_pred cccCcceeEEEEEEe-CCeEEEEEcC--C--EEEEEcCCCCCeEEeec
Q 036387 158 EEEDFNYRFNSISFK-GKEGWIVGKP--A--ILLHTSDAGESWERIPL 200 (334)
Q Consensus 158 ~~~~~~~~~~~I~~~-~~~~~~vG~~--g--~i~~S~DgG~TW~~~~~ 200 (334)
... ...-..|... ++++++.... | .+++|+|+|+||+....
T Consensus 509 ~~~--~~~e~~vve~~dG~L~~~~R~~~G~~~v~~S~DgG~TWt~~~~ 554 (679)
T 2sli_A 509 TGG--ATAEAQIVEMPDGSLKTYLRTGSNCIAEVTSIDGGETWSDRVP 554 (679)
T ss_dssp CSC--CCCCEEEEECTTSCEEEEECCSSSSCEEEEESSTTSSCCCCEE
T ss_pred CCC--CccceEEEEeCCCEEEEEEEeCCCCEEEEEEcCCCcCCCCCcc
Confidence 100 0111223333 4777776432 3 68999999999998764
No 29
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.39 E-value=0.00025 Score=73.11 Aligned_cols=232 Identities=7% Similarity=-0.049 Sum_probs=135.4
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEccc------CC-CCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeC
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYI------PV-DPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPR 152 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~------p~-~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~ 152 (334)
.|.+|++..+ ++|.+-......++.... +. -....+.+|..++ .+.+|+....+.|++-......++..
T Consensus 323 ~g~lWigt~~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~lWigt~~~Gl~~~~~~~~~~~~~ 398 (781)
T 3v9f_A 323 FNNIWIGTWG--GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QGKLWIGTDGGGINVFENGKRVAIYN 398 (781)
T ss_dssp SCCEEEEEBS--SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TSCEEEEEBSSCEEEEETTEEEEECC
T ss_pred CCCEEEEecC--CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CCCEEEEeCCCcEEEEECCCCeEEEc
Confidence 4678877644 457665555556665431 11 1224678888753 37788766455566544444445543
Q ss_pred cCCCCcccCcceeEEEEEEe-CCeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC
Q 036387 153 SIPSAEEEDFNYRFNSISFK-GKEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG 231 (334)
Q Consensus 153 ~~p~~~~~~~~~~~~~I~~~-~~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g 231 (334)
..+... ....+.+|..+ ++.+|+....++|++-+.....++.+... .++.. .+..+....++
T Consensus 399 ~~~~~~---~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~-~~~~~-------------~v~~i~~d~~g 461 (781)
T 3v9f_A 399 KENREL---LSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELE-KNELL-------------DVRVFYEDKNK 461 (781)
T ss_dssp -----C---CCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCST-TTCCC-------------CEEEEEECTTS
T ss_pred cCCCCC---CCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccC-CCCCC-------------eEEEEEECCCC
Confidence 211110 11257777766 47888876667788877665677776532 11111 23334445578
Q ss_pred CEEEEEcCCeEEEecCCCcceeeEecccc--CCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCc-ccc
Q 036387 232 GLWLLVRGGGLFLSKGTGITEEFEEVPVQ--SRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNI-AAN 308 (334)
Q Consensus 232 ~~~~~~~~g~i~~S~D~G~tW~w~~~~~~--~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~-~~~ 308 (334)
.+|+.+. ++|++-......|+....... .....+.++....++.+|+.+..+.|++-.-.+..++.+...... ...
T Consensus 462 ~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~ 540 (781)
T 3v9f_A 462 KIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNT 540 (781)
T ss_dssp EEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCSC
T ss_pred CEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCe
Confidence 8999887 677765443333322221110 011246777777788999987645576665555678877543222 356
Q ss_pred eeEEEEeeCCeEEEEeCCeeEEEEc
Q 036387 309 LYSVKFINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 309 l~~i~~~~~~~~~a~G~~G~il~s~ 333 (334)
+.+|....++++|+++.+|++++.+
T Consensus 541 i~~i~~d~~g~lWi~T~~Glv~~~d 565 (781)
T 3v9f_A 541 INQIYRSSKGQMWLATGEGLVCFPS 565 (781)
T ss_dssp EEEEEECTTSCEEEEETTEEEEESC
T ss_pred eEEEEECCCCCEEEEECCCceEEEC
Confidence 8888887889999999988766654
No 30
>2bf6_A Sialidase, EXO-alpha-sialidase; sialic acid, hydrolase; HET: SIA; 0.97A {Clostridium perfringens} PDB: 2vk5_A 2vk6_A* 2vk7_A*
Probab=98.37 E-value=2.8e-06 Score=82.67 Aligned_cols=60 Identities=20% Similarity=0.233 Sum_probs=36.9
Q ss_pred CeEEEecCCCcceeeEeccccCC------------------CeeeEEEEeecCCeEEEEeC--CC--cEEEEcCCCcCcE
Q 036387 240 GGLFLSKGTGITEEFEEVPVQSR------------------GFGILDVGYRSQDEAWAAGG--SG--VLLKTTNGGKTWI 297 (334)
Q Consensus 240 g~i~~S~D~G~tW~w~~~~~~~~------------------~~~~~~v~~~~~~~~~~~G~--~G--~i~~S~DgG~tW~ 297 (334)
..+++|.|+|+||+......... ...-..+....++.+++... .| .+++|+|+|+||+
T Consensus 253 ~~v~~S~D~G~tW~~~~~~~~~~~~~~G~~~~~~~~~~g~~~~~e~~vve~~dG~l~~~~R~~~g~~~v~~S~D~G~TWs 332 (449)
T 2bf6_A 253 SAVIYSDDSGKNWTIGESPNDNRKLENGKIINSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSGYLNIATSFDGGATWD 332 (449)
T ss_dssp EEEEEESSTTSSCEECCCTTTTEECTTSCEECTTTCCCSTTCEEEEEEEECTTSCEEEEEEESSSEEEEEEESSTTSCCC
T ss_pred EEEEEECCCCCceeECCccCcccccccccccccccccccCCCCCCCEEEEecCCEEEEEEEeCCCCEEEEEECCCCcccc
Confidence 36899999999986544321110 00111244445677766532 34 5799999999999
Q ss_pred Ec
Q 036387 298 RE 299 (334)
Q Consensus 298 ~~ 299 (334)
..
T Consensus 333 ~~ 334 (449)
T 2bf6_A 333 ET 334 (449)
T ss_dssp SC
T ss_pred Cc
Confidence 75
No 31
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=98.33 E-value=1.3e-06 Score=90.20 Aligned_cols=139 Identities=19% Similarity=0.213 Sum_probs=71.8
Q ss_pred CEEEEEcCCCCCeEEeecCCCCCCCcccccccC-ccccceEee-eeEeecCCEEEEEcC-------------CeEEEecC
Q 036387 183 AILLHTSDAGESWERIPLSSQLPGDMAFWQPHN-RAVARRIQN-MGWRADGGLWLLVRG-------------GGLFLSKG 247 (334)
Q Consensus 183 g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~-~~~~~~i~~-~~~~~~g~~~~~~~~-------------g~i~~S~D 247 (334)
..+++|+|+|+||+.-.. ++.... ..++. ......++. +.-.+||.+++.... ..+++|.|
T Consensus 582 s~~~ySdD~GkTW~~g~~---i~~~~~-~~~~~~~~~~~~~E~~ivEl~DG~Ll~~~R~~~~~~~~g~~~g~r~va~S~D 657 (781)
T 1w0p_A 582 VMSIYSDDGGSNWQTGST---LPIPFR-WKSSSILETLEPSEADMVELQNGDLLLTARLDFNQIVNGVNYSPRQQFLSKD 657 (781)
T ss_dssp EEEEEESSSSSSCEECCC---CCCCEE-ESSSSCEEECEEEEEEEEECTTSCEEEEEEEESCCEETTEECCSEEEEEESS
T ss_pred EEEEEECCCCCccccccc---cCcccc-ccccccccCCCccCCEEEEecCCEEEEEEecCccccccccCcccEEEEEECC
Confidence 467899999999998543 111000 00000 000001111 222467887765421 13578999
Q ss_pred CCcceeeEec-------cccC--CCeeeEEEEeecCCeEEEEe-C-----------CCcEEEEcCCCcCcEEcccCCCcc
Q 036387 248 TGITEEFEEV-------PVQS--RGFGILDVGYRSQDEAWAAG-G-----------SGVLLKTTNGGKTWIREKAADNIA 306 (334)
Q Consensus 248 ~G~tW~w~~~-------~~~~--~~~~~~~v~~~~~~~~~~~G-~-----------~G~i~~S~DgG~tW~~~~~~~~~~ 306 (334)
+|+||+-... .++. ....++.+...+...+++.. . ...+..|.|+|+||.....-....
T Consensus 658 gG~TWs~~~~~~~~~~p~Lp~p~~~~Sii~~~~~dG~~~Llfsnp~~~~a~~~~R~~L~l~~S~DdG~TW~~~~~L~~g~ 737 (781)
T 1w0p_A 658 GGITWSLLEANNANVFSNISTGTVDASITRFEQSDGSHFLLFTNPQGNPAGTNGRQNLGLWFSFDEGVTWKGPIQLVNGA 737 (781)
T ss_dssp SSSSCEEEEEEEGGGSTTCCSSCCCCEEEEEECTTSCEEEEEEEECTTTTTSSSSBSEEEEEESSTTSCCEEEEECCSSB
T ss_pred CCcCCCCceeccccccccCCCCCccceEEEeccCCCCEEEEEECCcccccCCCCcCCEEEEEECCCCCCCCCCeEeCCCC
Confidence 9999854332 1221 11123322111222333332 1 135788999999998864422223
Q ss_pred cceeEEEEeeCCeEEEEeC
Q 036387 307 ANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 307 ~~l~~i~~~~~~~~~a~G~ 325 (334)
....++...++++++++=+
T Consensus 738 ~gYs~l~~l~DG~i~llYE 756 (781)
T 1w0p_A 738 SAYSDIYQLDSENAIVIVE 756 (781)
T ss_dssp CCSEEEEECSSSEEEEEEE
T ss_pred CCCCceEEeCCCEEEEEEE
Confidence 4456777778888877633
No 32
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.00045 Score=71.11 Aligned_cols=226 Identities=11% Similarity=0.053 Sum_probs=132.7
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEE 159 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~ 159 (334)
.|.+|+...+ ++|++-......++....+......+.+|..++ .+.+|+... +.|++-.-....|+........
T Consensus 417 ~g~lWigt~~--~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~--~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~- 490 (781)
T 3v9f_A 417 EGNLWFGTYL--GNISYYNTRLKKFQIIELEKNELLDVRVFYEDK--NKKIWIGTH-AGVFVIDLASKKVIHHYDTSNS- 490 (781)
T ss_dssp TSCEEEEETT--EEEEEECSSSCEEEECCSTTTCCCCEEEEEECT--TSEEEEEET-TEEEEEESSSSSCCEEECTTTS-
T ss_pred CCCEEEEecc--CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC--CCCEEEEEC-CceEEEeCCCCeEEecccCccc-
Confidence 5778887654 457765554456766643211225678887763 478888766 4555544344557654321100
Q ss_pred cCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc
Q 036387 160 EDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR 238 (334)
Q Consensus 160 ~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~ 238 (334)
......+.+|..+. +++|+....++|++-+-.+..++.+.....++.. .+..+....+|.+|+.+.
T Consensus 491 ~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~-------------~i~~i~~d~~g~lWi~T~ 557 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSN-------------TINQIYRSSKGQMWLATG 557 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEEEEECTTTTCSCS-------------CEEEEEECTTSCEEEEET
T ss_pred ccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeEEEccCCCCCCCC-------------eeEEEEECCCCCEEEEEC
Confidence 00112567777764 7888887755688877666778877543222211 233444456788999987
Q ss_pred CCeE-EEecCCCcceeeEecc----ccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCccc-ce--e
Q 036387 239 GGGL-FLSKGTGITEEFEEVP----VQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAA-NL--Y 310 (334)
Q Consensus 239 ~g~i-~~S~D~G~tW~w~~~~----~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~~-~l--~ 310 (334)
.++ ++-...... ++... ++. ..+.++....++.+|+.+..|......+ ..+++.+...++... .+ .
T Consensus 558 -~Glv~~~d~~~~~--~~~~~~~~gl~~--~~i~~i~~d~~g~lW~~t~~Gl~~~~~~-~~~~~~~~~~dGl~~~~f~~~ 631 (781)
T 3v9f_A 558 -EGLVCFPSARNFD--YQVFQRKEGLPN--THIRAISEDKNGNIWASTNTGISCYITS-KKCFYTYDHSNNIPQGSFISG 631 (781)
T ss_dssp -TEEEEESCTTTCC--CEEECGGGTCSC--CCCCEEEECSSSCEEEECSSCEEEEETT-TTEEEEECGGGTCCSSCEEEE
T ss_pred -CCceEEECCCCCc--EEEccccCCCCC--ceEEEEEECCCCCEEEEcCCceEEEECC-CCceEEecccCCccccccccC
Confidence 555 664433332 33332 222 1356777667789999887775544444 446777655333322 22 3
Q ss_pred EEEEeeCCeEEEEeCCeeEE
Q 036387 311 SVKFINEKKGFVLGNDGVLL 330 (334)
Q Consensus 311 ~i~~~~~~~~~a~G~~G~il 330 (334)
++....++++|+.+.+|++.
T Consensus 632 ~~~~~~~G~l~~g~~~Gl~~ 651 (781)
T 3v9f_A 632 CVTKDHNGLIYFGSINGLCF 651 (781)
T ss_dssp EEEECTTSCEEEEETTEEEE
T ss_pred ceEECCCCEEEEECCCceEE
Confidence 55556789999999999654
No 33
>4fj6_A Glycoside hydrolase family 33, candidate sialidas; bacterial neuraminidase repeat; HET: MSE GOL; 1.90A {Parabacteroides distasonis}
Probab=98.27 E-value=6.2e-06 Score=81.69 Aligned_cols=108 Identities=21% Similarity=0.296 Sum_probs=57.4
Q ss_pred EEEEEcCCCCCeEEeecCC-CC-CCCcccccccCccccceEeeeeEeecCCEEEEEc----C----CeEEEecCCCccee
Q 036387 184 ILLHTSDAGESWERIPLSS-QL-PGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR----G----GGLFLSKGTGITEE 253 (334)
Q Consensus 184 ~i~~S~DgG~TW~~~~~~~-~l-~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~----~----g~i~~S~D~G~tW~ 253 (334)
.+.+|+|+|+||+....-+ .. .....++... ....| ...+|.+++... . ..+++|.|+|+||+
T Consensus 294 ~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~g---~G~GI----~l~dGrLv~P~~~~~~~g~~~s~i~~S~D~G~TW~ 366 (523)
T 4fj6_A 294 MLVKSEDDGKTWSEPINITSQVKDPSWYFLLQG---PGRGI----TMQDGTLVFPIQFIDATRVPNAGIMYSKDRGKTWH 366 (523)
T ss_dssp EEEEESSTTSSCCCCEECHHHHCCTTCSEEEEC---SEECE----ECTTSCEEEEEEEECTTSCEEEEEEEESSTTSSCE
T ss_pred EEEEcCCCCccCCCCeeecccccCCcceEEecC---CCcce----EEeCCeEEEEEEEEcCCCCEEEEEEEECCCCCeEE
Confidence 5789999999998743210 00 0000000000 00011 124666554321 1 24789999999986
Q ss_pred eEeccccCCCeeeEEEEeecCCeEEEE--eC-CC--cEEEEcCCCcCcEEcc
Q 036387 254 FEEVPVQSRGFGILDVGYRSQDEAWAA--GG-SG--VLLKTTNGGKTWIREK 300 (334)
Q Consensus 254 w~~~~~~~~~~~~~~v~~~~~~~~~~~--G~-~G--~i~~S~DgG~tW~~~~ 300 (334)
......+. ..-..+.-..++.+++. .. .| .+++|+|+|+||+...
T Consensus 367 ~~~~~~~~--~~e~~vve~~dG~L~~~~R~~~~g~r~v~~S~D~G~TWt~~~ 416 (523)
T 4fj6_A 367 LHNLARTN--TTEAQVAEVEPGVLMLNMRDNRGGSRAVATTKDLGKTWTEHP 416 (523)
T ss_dssp ECCCSEET--EEEEEEEEEETTEEEEEEEETTCSBCEEEEESSTTSSCEECT
T ss_pred ECCCCCcc--ccCCEEEEecCCEEEEEEEecCCCcEEEEEECCCCCccCcCc
Confidence 44322111 11122333346777763 11 23 5899999999999864
No 34
>1w0p_A Sialidase; hydrolase, neuraminidase, lectin; HET: SIA; 1.6A {Vibrio cholerae} SCOP: b.29.1.8 b.29.1.8 b.68.1.1 PDB: 1w0o_A* 1kit_A 2w68_A*
Probab=98.25 E-value=2.1e-06 Score=88.75 Aligned_cols=105 Identities=10% Similarity=0.164 Sum_probs=55.3
Q ss_pred ceEEecCCCCCcEEcccC-----CCCCeeeE--EEEEecCCCCEEEEEEc---C--------------C--eEEEEcCCC
Q 036387 93 QPAKSEEALSAWERVYIP-----VDPGVVLL--DIAFVPDDLNHGFLLGT---R--------------Q--TLLETKDGG 146 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~p-----~~~~~~l~--~I~~~p~d~~~~~avG~---~--------------g--~i~~S~DgG 146 (334)
.+.||+|+|+||.....- ......+. .+.+++. ..++|++=. . . .+.+|+|+|
T Consensus 261 v~rRS~DgG~TWs~~~~v~~~~~~~~~~~~~dP~~v~D~~-tG~I~lf~~~~~~~~~~eg~~~~~~~~~~v~~~~S~D~G 339 (781)
T 1w0p_A 261 ITRTSRDGGITWDTELNLTEQINVSDEFDFSDPRPIYDPS-SNTVLVSYARWPTDAAQNGDRIKPWMPNGIFYSVYDVAS 339 (781)
T ss_dssp EEEEESSSSSSCCCCEESSGGGCTTSCEEEEEEEEEEETT-TTEEEEEEEEEETTCCSGGGCCCTTSCCEEEEEEEETTT
T ss_pred EEEEcCCCCcccCCcEEEecCCCCCCCCeeeCCEEEEECC-CCEEEEEEEeccCCccccccccccCCCceEEEEEecCCC
Confidence 578999999999864311 11234455 4445432 357665421 1 1 356799999
Q ss_pred cCeEeC-cCCCCcccCccee--------EEEEE--EeCCeEEE-------EEcCCEEEEEcCCCCCeEEee
Q 036387 147 KTWAPR-SIPSAEEEDFNYR--------FNSIS--FKGKEGWI-------VGKPAILLHTSDAGESWERIP 199 (334)
Q Consensus 147 ~TW~~~-~~p~~~~~~~~~~--------~~~I~--~~~~~~~~-------vG~~g~i~~S~DgG~TW~~~~ 199 (334)
+||+.. .+..... +..+. +..+. +....+|. ......+.+++|||+||...-
T Consensus 340 ~TWS~P~~IT~~v~-~~~~~~~g~~G~~~~~~~~~~~~~~~w~~~~~~~~~~g~~~~~~s~DGg~tw~~~~ 409 (781)
T 1w0p_A 340 GNWQAPIDVTDQVK-ERSFQIAGWGGSELYRRNTSLNSQQDWQSNAKIRIVDGAANQIQVADGSRKYVVTL 409 (781)
T ss_dssp TEECCCEECHHHHS-CCCEEEEESSEEEEEEEECCCCTTSCEEEEEEEEEEEESCEEEEEEESSEEEEEEE
T ss_pred CcccCCeeeccccc-cccccccccccceeecccccccccccccccccccccCCccceEEecCCCeEEEeee
Confidence 999862 2211100 00000 00111 11233443 233456778899999997754
No 35
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.18 E-value=0.0012 Score=68.05 Aligned_cols=233 Identities=10% Similarity=0.044 Sum_probs=133.3
Q ss_pred cceeEEEecCCCccceEEecCCCCCcEEcccCC-----CCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCc
Q 036387 79 SLSISLAATTGLYEQPAKSEEALSAWERVYIPV-----DPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRS 153 (334)
Q Consensus 79 a~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~-----~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~ 153 (334)
..|.+|++..+ | |++-.-....++...... -....+.+|..++ .+.+|+....+.|++-......++...
T Consensus 272 ~~g~lWigt~~--G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~--~g~lWigt~~~Gl~~~~~~~~~~~~~~ 346 (795)
T 4a2l_A 272 SQNRLWIGTFN--D-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS--QGGMWLGTYFGGLNYYHPIRNRFKNIR 346 (795)
T ss_dssp TTSCEEEEESS--C-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT--TSCEEEEESSSCEEEECGGGGSSEEEC
T ss_pred CCCCEEEEeCC--h-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC--CcCEEEEECCCCeEEeCCCcccceEEc
Confidence 35677876653 3 555444445566553211 1235688888863 477887665566666544445565443
Q ss_pred CCCCcccCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC
Q 036387 154 IPSAEEEDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG 232 (334)
Q Consensus 154 ~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~ 232 (334)
............+.+|..+. +.+|+....++|++-+.....++........+.. .. . ...+..+....++.
T Consensus 347 ~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~-~l--~-----~~~v~~i~~d~~g~ 418 (795)
T 4a2l_A 347 NIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESAR-GI--G-----SNNIKAVYVDEKKS 418 (795)
T ss_dssp CCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC-------CC--S-----CSCEEEEEEETTTT
T ss_pred CCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCccc-CC--C-----CccEEEEEEcCCCC
Confidence 21111111112477777664 7899887776788877666778876532100000 00 0 01244455556788
Q ss_pred -EEEEEcCCeEEEecCC-CcceeeEeccc--c-CCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccC---CC
Q 036387 233 -LWLLVRGGGLFLSKGT-GITEEFEEVPV--Q-SRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAA---DN 304 (334)
Q Consensus 233 -~~~~~~~g~i~~S~D~-G~tW~w~~~~~--~-~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~---~~ 304 (334)
+|+.+.+++|++-... |+ +..... + .....+.++....++.+|+.+..| |++-.-....|+.+... ..
T Consensus 419 ~lWigt~~~Gl~~~d~~~~~---~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~G-l~~~~~~~~~~~~~~~~~~~~~ 494 (795)
T 4a2l_A 419 LVYIGTHAGGLSILHRNSGQ---VENFNQRNSQLVNENVYAILPDGEGNLWLGTLSA-LVRFNPEQRSFTTIEKEKDGTP 494 (795)
T ss_dssp EEEEEETTTEEEEEETTTCC---EEEECTTTSCCSCSCEEEEEECSSSCEEEEESSC-EEEEETTTTEEEECCBCTTCCB
T ss_pred EEEEEeCcCceeEEeCCCCc---EEEeecCCCCcCCCeeEEEEECCCCCEEEEecCc-eeEEeCCCCeEEEccccccccc
Confidence 9999887788776533 43 333221 1 111246777776678999987755 55544334568776542 01
Q ss_pred -cccceeEEEEeeCCeEEEEeCCee
Q 036387 305 -IAANLYSVKFINEKKGFVLGNDGV 328 (334)
Q Consensus 305 -~~~~l~~i~~~~~~~~~a~G~~G~ 328 (334)
....++++....++++|+++..|+
T Consensus 495 ~~~~~i~~i~~d~~g~lWigt~~Gl 519 (795)
T 4a2l_A 495 VVSKQITTLFRDSHKRLWIGGEEGL 519 (795)
T ss_dssp CCCCCEEEEEECTTCCEEEEESSCE
T ss_pred cCCceEEEEEECCCCCEEEEeCCce
Confidence 125688888888899999988664
No 36
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.17 E-value=0.0019 Score=66.50 Aligned_cols=239 Identities=12% Similarity=0.046 Sum_probs=136.0
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCC-c
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSA-E 158 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~-~ 158 (334)
.|.+|+...+ .+|++=......++..... .....+.+|...+ .+.+|+....+.|++-.-....++....+.. .
T Consensus 183 ~g~lwigt~~--~Gl~~~~~~~~~~~~~~~~-~~~~~i~~i~~d~--~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 257 (795)
T 4a2l_A 183 GDQIYIGTST--DGLYTYSITQKTFEKVIPI-LGTKQIQAILQQS--PTRIWVATEGAGLFLINPKTKEIKNYLHSPSNP 257 (795)
T ss_dssp TTEEEEEESS--SCEEEEETTTCCEEECC-----CCCEEEEEEEE--TTEEEEEEBSSCEEEEETTTTEEEEECCCTTCT
T ss_pred CCCEEEEECC--CCEEEEeCCCCeEEEecCC-CCCCeeEEEEEcC--CCCEEEEECCCCeEEEeCCCCeEEEeecCCCCc
Confidence 4677876643 3477655455667665311 1124678888764 3788887644345554444445665432210 0
Q ss_pred ccCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE
Q 036387 159 EEDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV 237 (334)
Q Consensus 159 ~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~ 237 (334)
.......+.+|..+. +.+|+.... +|++-.-....++.+......+.. . . ...+..+....+|.+|+.+
T Consensus 258 ~~l~~~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~--l--~-----~~~i~~i~~D~~g~lWigt 327 (795)
T 4a2l_A 258 KSISSNYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFASYSSNPVENGS--L--S-----QRSVRSIFMDSQGGMWLGT 327 (795)
T ss_dssp TSCSCSBEEEEEECTTSCEEEEESS-CEEEEETTTTEEEEECCCTTSTTS--C--S-----SSCEEEEEECTTSCEEEEE
T ss_pred cccCCCeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEEEEecCCCCCCC--C--C-----CCcEEEEEEeCCcCEEEEE
Confidence 000112577887764 788887766 566655555678776532110100 0 0 1135555556788999999
Q ss_pred cCCeEEEecCCCcceeeEec-cccC--CCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCC------Ccccc
Q 036387 238 RGGGLFLSKGTGITEEFEEV-PVQS--RGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAAD------NIAAN 308 (334)
Q Consensus 238 ~~g~i~~S~D~G~tW~w~~~-~~~~--~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~------~~~~~ 308 (334)
..++|++-......++.... +.+. ....+.++....++.+|+....+.|++-......++.+.... .....
T Consensus 328 ~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 407 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNN 407 (795)
T ss_dssp SSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSC
T ss_pred CCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCcc
Confidence 88888776543332221111 1111 112467777777889999777666766655556687765321 11356
Q ss_pred eeEEEEeeCCe-EEEEeCCeeEEEEc
Q 036387 309 LYSVKFINEKK-GFVLGNDGVLLQYL 333 (334)
Q Consensus 309 l~~i~~~~~~~-~~a~G~~G~il~s~ 333 (334)
++++....+++ +|+.+..+.|++.+
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d 433 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILH 433 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEe
Confidence 88888877888 99988755566553
No 37
>2xzi_A KDNAse, extracellular sialidase/neuraminidase, putative; hydrolase; HET: KDM; 1.45A {Aspergillus fumigatus} PDB: 2xcy_A* 2xzj_A* 2xzk_A*
Probab=97.95 E-value=8.1e-05 Score=70.80 Aligned_cols=97 Identities=9% Similarity=0.130 Sum_probs=56.1
Q ss_pred cceEEecCCCCCcEEcc-cC---CCC------CeeeEEEEEecCCCCEEEEEEcCCeEEEEcC--CCcCeEeCcCCCCcc
Q 036387 92 EQPAKSEEALSAWERVY-IP---VDP------GVVLLDIAFVPDDLNHGFLLGTRQTLLETKD--GGKTWAPRSIPSAEE 159 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~-~p---~~~------~~~l~~I~~~p~d~~~~~avG~~g~i~~S~D--gG~TW~~~~~p~~~~ 159 (334)
..+.+|+|+|+||.... .+ ... ...-..|... ..++++... ..+++|+| +|+||+....... .
T Consensus 153 l~~~~S~D~G~TWs~p~~l~~~~~~~~~~~~~~~~g~gI~l~---dGrLv~p~~-~~~~~S~D~~~G~tW~~~~~~~~-~ 227 (386)
T 2xzi_A 153 LYLTESRDDGNTWSKPVDLTKELTPDGWAWDAVGPGNGIRLT---TGELVIPAM-GRNIIGRGAPGNRTWSVQRLSGA-G 227 (386)
T ss_dssp EEEEEESSTTSCCCCCEECHHHHSCTTCCSCCBCSSCCEECT---TSCEEEEET-TEEEEEESSTTSCEEEEEECTTC-C
T ss_pred EEEEEECCCCccCCCcccCccccccccceeeccCCccEEEec---CCEEEEEeE-EEEEEccCCCCCCcccccCcCCC-C
Confidence 34788999999998421 11 000 0111334442 355555444 77888999 9999996543211 1
Q ss_pred cCcceeEEEEEEeCCeEEEEEcC-----CEEEEEcCCCCCeEEee
Q 036387 160 EDFNYRFNSISFKGKEGWIVGKP-----AILLHTSDAGESWERIP 199 (334)
Q Consensus 160 ~~~~~~~~~I~~~~~~~~~vG~~-----g~i~~S~DgG~TW~~~~ 199 (334)
.+ ..-+...++++++.... -.+++|+| +||+...
T Consensus 228 ~e----~~vve~~dG~L~~~~r~~~g~~r~v~~S~D--~tWt~~~ 266 (386)
T 2xzi_A 228 AE----GTIVQTPDGKLYRNDRPSQKGYRMVARGTL--EGFGAFA 266 (386)
T ss_dssp SS----EEEEECTTSCEEEEECCSSSEEEEEEEEET--TEECCCE
T ss_pred Cc----CEEEEeCCCcEEEEEeCCCCccEEEEEEeC--CccCccc
Confidence 11 11122235677765321 36899999 9999865
No 38
>2w20_A Sialidase A; secreted, cell WALL, hydrolase, glycosidase, neuraminidase, peptidoglycan-anchor; HET: MES; 1.49A {Streptococcus pneumoniae} PDB: 2vvz_A* 3h71_A 3h72_A* 3h73_A* 2ya8_A* 2ya5_A* 2ya6_A* 2ya7_A* 2ya4_A*
Probab=97.94 E-value=6.2e-05 Score=73.60 Aligned_cols=105 Identities=12% Similarity=0.149 Sum_probs=55.5
Q ss_pred eEEecCCCCCcEEccc-C---CCCC------eeeEEEEEe-cCCCCEEEEE--Ec----------CCeEEEEcCCCcCeE
Q 036387 94 PAKSEEALSAWERVYI-P---VDPG------VVLLDIAFV-PDDLNHGFLL--GT----------RQTLLETKDGGKTWA 150 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~-p---~~~~------~~l~~I~~~-p~d~~~~~av--G~----------~g~i~~S~DgG~TW~ 150 (334)
+.+|+|+|+||..... + ...- ..-..|... +.+..++++. .. ...+++|+|+|+||+
T Consensus 218 ~~~S~D~G~TWs~p~~l~~~~~~~~~~f~~~gpg~gI~l~d~~~~GrLv~p~~~~~~~~~~~g~~~~~v~~SdD~G~TW~ 297 (471)
T 2w20_A 218 MSYSDDDGKTWSAPQDITPMVKADWMKFLGVGPGTGIVLRNGPHKGRILIPVYTTNNVSHLNGSQSSRIIYSDDHGKTWH 297 (471)
T ss_dssp EEEESSTTSSCCCCEECHHHHCCTTCSCEEECCEECEECCSSTTTTCEEEEEEECCTTTHHHHCCEEEEEEESSTTSSCE
T ss_pred EEEECCCcCcCCCCcccCcccccccccccccCCcceEEecCCCcCCeEEEEEEEeccccCCCCcEEEEEEEECCCCCCcc
Confidence 6899999999985321 0 0000 111234442 0112565542 11 135889999999999
Q ss_pred eCcCCCCc---ccC-----------cceeEEEEEE-eCCeEEEEEc--CC--EEEEEcCCCCCeEEe
Q 036387 151 PRSIPSAE---EED-----------FNYRFNSISF-KGKEGWIVGK--PA--ILLHTSDAGESWERI 198 (334)
Q Consensus 151 ~~~~p~~~---~~~-----------~~~~~~~I~~-~~~~~~~vG~--~g--~i~~S~DgG~TW~~~ 198 (334)
........ +.. ....-..|.. .++++++... .+ .+++|+|+|+||+..
T Consensus 298 ~~~~v~~~~~~~g~~~~~~~~~~~~~~~~ep~vve~~dG~L~~~~R~~~G~~~v~~S~DgG~TWs~~ 364 (471)
T 2w20_A 298 AGEAVNDNRQVDGQKIHSSTMNNRRAQNTESTVVQLNNGDVKLFMRGLTGDLQVATSKDGGVTWEKD 364 (471)
T ss_dssp ECCCTTTTEEETTEEECTTTCCCGGGCCCSEEEEECTTSCEEEEECCSSSEEEEEEESSSSSSCCSC
T ss_pred cCCccCcccccCccccccccccccCcCccCCEEEEcCCCeEEEEEEeCCCCEEEEEEcCCCcCCCCc
Confidence 86532211 000 0000012222 2456665532 23 589999999999964
No 39
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.50 E-value=0.043 Score=48.00 Aligned_cols=222 Identities=9% Similarity=0.078 Sum_probs=121.4
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAE 158 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~ 158 (334)
.|.+|++... .+.|.+=... .....+..+.. .....+|++.++ ..+|++.. .+.|++-.-.| .++....+...
T Consensus 30 ~g~l~v~~~~-~~~v~~~~~~-~~~~~~~~~~~-~~~~~~i~~~~~--g~l~v~~~~~~~v~~~d~~g-~~~~~~~~~~~ 103 (300)
T 2qc5_A 30 DGKVWFTQHK-ANKISSLDQS-GRIKEFEVPTP-DAKVMCLIVSSL--GDIWFTENGANKIGKLSKKG-GFTEYPLPQPD 103 (300)
T ss_dssp TSCEEEEETT-TTEEEEECTT-SCEEEEECSST-TCCEEEEEECTT--SCEEEEETTTTEEEEECTTS-CEEEEECSSTT
T ss_pred CCCEEEEcCC-CCeEEEECCC-CceEEEECCCC-CCcceeEEECCC--CCEEEEecCCCeEEEECCCC-CeEEecCCCCC
Confidence 3556665432 1345554333 44444433321 246778888753 56787765 45566543234 35554443211
Q ss_pred ccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE
Q 036387 159 EEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL 236 (334)
Q Consensus 159 ~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~ 236 (334)
.....|.+++ +.+|+... .+.|++-+-.| ....+..+. ... ....+.+.+++.+|++
T Consensus 104 -----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~--~~~-------------~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 104 -----SGPYGITEGLNGDIWFTQLNGDRIGKLTADG-TIYEYDLPN--KGS-------------YPAFITLGSDNALWFT 162 (300)
T ss_dssp -----CCEEEEEECSTTCEEEEETTTTEEEEECTTS-CEEEEECSS--TTC-------------CEEEEEECTTSSEEEE
T ss_pred -----CCCccceECCCCCEEEEccCCCeEEEECCCC-CEEEccCCC--CCC-------------CceeEEECCCCCEEEE
Confidence 1456777774 77888765 45676654433 344433211 000 1234556677889988
Q ss_pred Ec-CCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCC-CcEEEEcCCCcCcEEcccCCCcccceeEEEE
Q 036387 237 VR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGS-GVLLKTTNGGKTWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 237 ~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~-G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~ 314 (334)
.. .+.|++-...|+ +.....+.......++.+.+++.+|++... +.|++-.-.| .......+ .......+|++
T Consensus 163 ~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~-~~~~~~~~i~~ 237 (300)
T 2qc5_A 163 ENQNNSIGRITNTGK---LEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-EISEYDIP-TPNARPHAITA 237 (300)
T ss_dssp ETTTTEEEEECTTCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CEEEEECS-STTCCEEEEEE
T ss_pred ecCCCeEEEECCCCc---EEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-cEEEEECC-CCCCCceEEEE
Confidence 75 456766554443 233333322224567877777889998653 4565543333 35544332 12346788988
Q ss_pred eeCCeEEEEeC-CeeEEEEc
Q 036387 315 INEKKGFVLGN-DGVLLQYL 333 (334)
Q Consensus 315 ~~~~~~~a~G~-~G~il~s~ 333 (334)
.+++++|++.. ++.|.+.+
T Consensus 238 d~~g~l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRIT 257 (300)
T ss_dssp CSTTCEEEEETTTTEEEEEC
T ss_pred CCCCCEEEeccCCCeEEEEC
Confidence 88889998873 35666653
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.48 E-value=0.045 Score=47.85 Aligned_cols=222 Identities=9% Similarity=0.075 Sum_probs=122.3
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAE 158 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~ 158 (334)
.|.+|++... .+.|++-.-. ..+.....+.. .....+|++.++ +.+|++.. .+.|++=.-.| ..+....+...
T Consensus 25 ~g~l~v~~~~-~~~v~~~d~~-~~~~~~~~~~~-~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~ 98 (299)
T 2z2n_A 25 KGKVWITQHK-ANMISCINLD-GKITEYPLPTP-DAKVMCLTISSD--GEVWFTENAANKIGRITKKG-IIKEYTLPNPD 98 (299)
T ss_dssp TSCEEEEETT-TTEEEEECTT-CCEEEEECSST-TCCEEEEEECTT--SCEEEEETTTTEEEEECTTS-CEEEEECSSTT
T ss_pred CCCEEEEecC-CCcEEEEcCC-CCeEEecCCcc-cCceeeEEECCC--CCEEEeCCCCCeEEEECCCC-cEEEEeCCCcC
Confidence 4556665432 1345554333 34554433321 256788999753 56787765 45666544334 35554443211
Q ss_pred ccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE
Q 036387 159 EEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL 236 (334)
Q Consensus 159 ~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~ 236 (334)
.....|.+++ +.+|+... .+.|++-+-.| ....+..+. .. .....+.+.+++.+|++
T Consensus 99 -----~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~----~~-----------~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 99 -----SAPYGITEGPNGDIWFTEMNGNRIGRITDDG-KIREYELPN----KG-----------SYPSFITLGSDNALWFT 157 (299)
T ss_dssp -----CCEEEEEECTTSCEEEEETTTTEEEEECTTC-CEEEEECSS----TT-----------CCEEEEEECTTSCEEEE
T ss_pred -----CCceeeEECCCCCEEEEecCCceEEEECCCC-CEEEecCCC----CC-----------CCCceEEEcCCCCEEEE
Confidence 1456788775 77888764 45676654433 344443211 00 01334566677889988
Q ss_pred Ec-CCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEE
Q 036387 237 VR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 237 ~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~ 314 (334)
.. .+.|++-...|+ ......+.......++++.+++.+|++.. .+.|++-.-.| ..+.+..+ .......+|.+
T Consensus 158 ~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~-~~~~~~~~i~~ 232 (299)
T 2z2n_A 158 ENQNNAIGRITESGD---ITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITTSG-EITEFKIP-TPNARPHAITA 232 (299)
T ss_dssp ETTTTEEEEECTTCC---EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-CEEEEECS-STTCCEEEEEE
T ss_pred eCCCCEEEEEcCCCc---EEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECCCC-cEEEEECC-CCCCCceeEEE
Confidence 75 467766554443 33332332223456788777788998864 45565443333 35554332 12356889999
Q ss_pred eeCCeEEEEe-CCeeEEEEc
Q 036387 315 INEKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 315 ~~~~~~~a~G-~~G~il~s~ 333 (334)
.+++++|++. .++.|.+.+
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLT 252 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEE
T ss_pred CCCCCEEEeccCCceEEEEC
Confidence 8888999886 445566543
No 41
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.46 E-value=0.049 Score=47.65 Aligned_cols=222 Identities=9% Similarity=0.068 Sum_probs=122.0
Q ss_pred cceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCC
Q 036387 79 SLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSA 157 (334)
Q Consensus 79 a~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~ 157 (334)
..|.+|++... .+.|++-...| ..+.+..|.. .....+|++.++ +.+|++.. .+.|++-.-.| .......+..
T Consensus 66 ~~g~l~v~~~~-~~~i~~~~~~g-~~~~~~~~~~-~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~~g-~~~~~~~~~~ 139 (299)
T 2z2n_A 66 SDGEVWFTENA-ANKIGRITKKG-IIKEYTLPNP-DSAPYGITEGPN--GDIWFTEMNGNRIGRITDDG-KIREYELPNK 139 (299)
T ss_dssp TTSCEEEEETT-TTEEEEECTTS-CEEEEECSST-TCCEEEEEECTT--SCEEEEETTTTEEEEECTTC-CEEEEECSST
T ss_pred CCCCEEEeCCC-CCeEEEECCCC-cEEEEeCCCc-CCCceeeEECCC--CCEEEEecCCceEEEECCCC-CEEEecCCCC
Confidence 34667776542 14466544333 3454443421 246788999753 57887764 34565533223 3444333321
Q ss_pred cccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE
Q 036387 158 EEEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL 235 (334)
Q Consensus 158 ~~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~ 235 (334)
. .....|.+++ +++|+... .+.|++-+- ....+.+..+. .. .....+.+.+++.+|+
T Consensus 140 ~-----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~----~~-----------~~~~~i~~~~~g~l~v 198 (299)
T 2z2n_A 140 G-----SYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPT----PA-----------SGPVGITKGNDDALWF 198 (299)
T ss_dssp T-----CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSS----TT-----------CCEEEEEECTTSSEEE
T ss_pred C-----CCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCC----CC-----------CcceeEEECCCCCEEE
Confidence 1 1456777774 67888764 456766554 33455443211 00 0123456667788998
Q ss_pred EEc-CCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcEEEEcCCCcCcEEcccCCCcccceeEEE
Q 036387 236 LVR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVLLKTTNGGKTWIREKAADNIAANLYSVK 313 (334)
Q Consensus 236 ~~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~ 313 (334)
++. .+.|++-.-.|+ +.....+.......++.+.+++.+|++. ..+.|++-.-.|+ .+.+..+ .......++.
T Consensus 199 ~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~-~~~~~~~~i~ 273 (299)
T 2z2n_A 199 VEIIGNKIGRITTSGE---ITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTSNNI-IEEYPIQ-IKSAEPHGIC 273 (299)
T ss_dssp EETTTTEEEEECTTCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEETTTE-EEEEECS-SSSCCEEEEE
T ss_pred EccCCceEEEECCCCc---EEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECCCCc-eEEEeCC-CCCCccceEE
Confidence 874 456665544443 3333333222346788887778899986 3455544332343 4444332 1224678888
Q ss_pred EeeCCeEEEEeCCeeEEEEc
Q 036387 314 FINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 314 ~~~~~~~~a~G~~G~il~s~ 333 (334)
+ +++++|+++..+.+.+.+
T Consensus 274 ~-~~g~l~v~~~~~~l~~~~ 292 (299)
T 2z2n_A 274 F-DGETIWFAMECDKIGKLT 292 (299)
T ss_dssp E-CSSCEEEEETTTEEEEEE
T ss_pred e-cCCCEEEEecCCcEEEEE
Confidence 8 889999997666666543
No 42
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=97.45 E-value=0.00053 Score=65.06 Aligned_cols=56 Identities=21% Similarity=0.156 Sum_probs=33.7
Q ss_pred eEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CC--cEEEEcCCCcCcEEc
Q 036387 241 GLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SG--VLLKTTNGGKTWIRE 299 (334)
Q Consensus 241 ~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G--~i~~S~DgG~tW~~~ 299 (334)
.+++|.| |+||+......+... .-..|.-. ++.+++... .| .+|+|.|+|+||...
T Consensus 205 ~~iyS~D-G~tW~~~~~~~~~~~-~ep~vvE~-dG~L~m~~R~~g~r~v~~S~D~G~tWt~~ 263 (379)
T 3sil_A 205 SFIYSTD-GITWSLPSGYCEGFG-SENNIIEF-NASLVNNIRNSGLRRSFETKDFGKTWTEF 263 (379)
T ss_dssp EEEEESS-SSSEECCSCCEECTT-CCEEEEEE-TTEEEEEECCSSBCBCEEESSSSSCCEEC
T ss_pred EEEEcCC-CCCeEECCCCCCccC-CCCEEEEE-CCEEEEEEEeCCCEEEEEEcCCCccCCCC
Confidence 3778999 999865442111110 11223323 566766432 23 579999999999986
No 43
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.45 E-value=0.0074 Score=54.16 Aligned_cols=209 Identities=11% Similarity=0.111 Sum_probs=111.1
Q ss_pred ceeEEEecCCCccceEEe-cCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEE-cCCCcCeEeCcCCCC
Q 036387 80 LSISLAATTGLYEQPAKS-EEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLET-KDGGKTWAPRSIPSA 157 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S-~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S-~DgG~TW~~~~~p~~ 157 (334)
.+.+|+.... +.|++= .++-..|+... +. ..+..+...+ .+.+|+....+.|++= .++-..|+.. .+..
T Consensus 107 ~~~l~v~t~~--~~l~~~d~~g~~~~~~~~-~~---~~~~~~~~~~--~g~l~vgt~~~~l~~~d~~g~~~~~~~-~~~~ 177 (330)
T 3hxj_A 107 EDILYVTSMD--GHLYAINTDGTEKWRFKT-KK---AIYATPIVSE--DGTIYVGSNDNYLYAINPDGTEKWRFK-TNDA 177 (330)
T ss_dssp TTEEEEECTT--SEEEEECTTSCEEEEEEC-SS---CCCSCCEECT--TSCEEEECTTSEEEEECTTSCEEEEEE-CSSC
T ss_pred CCEEEEEecC--CEEEEEcCCCCEEEEEcC-CC---ceeeeeEEcC--CCEEEEEcCCCEEEEECCCCCEeEEEe-cCCC
Confidence 5667776543 445543 33333576542 21 2345555542 3567776555666553 3333346543 2211
Q ss_pred cccCcceeEEEEEEe-CCeEEEEEcCCEEEEEc-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE
Q 036387 158 EEEDFNYRFNSISFK-GKEGWIVGKPAILLHTS-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL 235 (334)
Q Consensus 158 ~~~~~~~~~~~I~~~-~~~~~~vG~~g~i~~S~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~ 235 (334)
.+..+.++ ++.+|+.. +.|++-+ ++-..|+..... . .+..+....++.+|+
T Consensus 178 -------~~~~~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~-----~-------------~~~~~~~~~~g~l~v 230 (330)
T 3hxj_A 178 -------ITSAASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGY-----W-------------TVTRPAISEDGTIYV 230 (330)
T ss_dssp -------CCSCCEECTTCCEEEES--SSEEEECTTSCEEEEECCSS-----C-------------CCSCCEECTTSCEEE
T ss_pred -------ceeeeEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCC-----c-------------ceeceEECCCCeEEE
Confidence 23344454 46777766 5455544 444456653211 0 012234456778999
Q ss_pred EEcCCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCc-CcEEcccCCCcccceeEEEE
Q 036387 236 LVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGK-TWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 236 ~~~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~-tW~~~~~~~~~~~~l~~i~~ 314 (334)
.+.++++++-...|+. .|.. ..... ....+....++.+|+....|.|++-.-.|+ .|+.... ...+.++..
T Consensus 231 ~t~~~gl~~~~~~g~~-~~~~-~~~~~--~~~~~~~~~~g~l~v~t~~ggl~~~d~~g~~~~~~~~~----~~~~~~~~~ 302 (330)
T 3hxj_A 231 TSLDGHLYAINPDGTE-KWRF-KTGKR--IESSPVIGNTDTIYFGSYDGHLYAINPDGTEKWNFETG----SWIIATPVI 302 (330)
T ss_dssp EETTTEEEEECTTSCE-EEEE-ECSSC--CCSCCEECTTSCEEEECTTCEEEEECTTSCEEEEEECS----SCCCSCCEE
T ss_pred EcCCCeEEEECCCCCE-eEEe-eCCCC--ccccceEcCCCeEEEecCCCCEEEECCCCcEEEEEEcC----CccccceEE
Confidence 9888888776544542 1222 11111 011233345788999877766655533343 5654322 234566666
Q ss_pred eeCCeEEEEeCCeeEEEE
Q 036387 315 INEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 315 ~~~~~~~a~G~~G~il~s 332 (334)
..++++|+.+.+|.+...
T Consensus 303 d~~g~l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 303 DENGTIYFGTRNGKFYAL 320 (330)
T ss_dssp CTTCCEEEECTTSCEEEE
T ss_pred cCCCEEEEEcCCCeEEEE
Confidence 678999999999988754
No 44
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.40 E-value=0.054 Score=46.90 Aligned_cols=221 Identities=6% Similarity=0.035 Sum_probs=112.6
Q ss_pred ceeEEE-ecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCc
Q 036387 80 LSISLA-ATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAE 158 (334)
Q Consensus 80 ~g~~~~-~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~ 158 (334)
.|.+|+ +... .+.|++=..++...+...... .....+|++.++ +.+|++...+.|++=.-.|..-........
T Consensus 34 ~g~l~v~~~~~-~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~~~~--g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~- 107 (270)
T 1rwi_B 34 AGNVYVTSEGM-YGRVVKLATGSTGTTVLPFNG--LYQPQGLAVDGA--GTVYVTDFNNRVVTLAAGSNNQTVLPFDGL- 107 (270)
T ss_dssp TCCEEEEECSS-SCEEEEECC-----EECCCCS--CCSCCCEEECTT--CCEEEEETTTEEEEECTTCSCCEECCCCSC-
T ss_pred CCCEEEEccCC-CCcEEEecCCCcccceEeeCC--cCCcceeEECCC--CCEEEEcCCCEEEEEeCCCceEeeeecCCc-
Confidence 355666 4221 145665444443333332111 135678899763 457877655666654333433333322111
Q ss_pred ccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE
Q 036387 159 EEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL 236 (334)
Q Consensus 159 ~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~ 236 (334)
....+|.+++ +++|+... .+.|++-.++.......... + +- ....+.+.+++.+|++
T Consensus 108 -----~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~----~---~~---------~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 108 -----NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT----G---LN---------DPDGVAVDNSGNVYVT 166 (270)
T ss_dssp -----SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC----S---CC---------SCCCEEECTTCCEEEE
T ss_pred -----CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc----c---CC---------CceeEEEeCCCCEEEE
Confidence 1356788874 67887753 46777775554443332111 0 00 1123556677889988
Q ss_pred Ec-CCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEE
Q 036387 237 VR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 237 ~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~ 314 (334)
.. .+.|++-.-.+.. ........ .....++++.+++.+|++.. .+.|++-.-.|..-..... .......+|++
T Consensus 167 ~~~~~~i~~~~~~~~~--~~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~ 241 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNN--QVVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPF--TGLNTPLAVAV 241 (270)
T ss_dssp EGGGTEEEEECTTTCC--EEECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCC--CSCSCEEEEEE
T ss_pred ECCCCEEEEEecCCCc--eEeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeecc--CCCCCceeEEE
Confidence 75 3566655444331 11111111 12456788877778998864 4556554433332222222 11246788998
Q ss_pred eeCCeEEEEe-CCeeEEEE
Q 036387 315 INEKKGFVLG-NDGVLLQY 332 (334)
Q Consensus 315 ~~~~~~~a~G-~~G~il~s 332 (334)
.+++++|++. .++.|...
T Consensus 242 ~~~g~l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 242 DSDRTVYVADRGNDRVVKL 260 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEE
T ss_pred CCCCCEEEEECCCCEEEEE
Confidence 8888888875 45666554
No 45
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=97.35 E-value=0.019 Score=57.85 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=34.3
Q ss_pred EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE--cCC--eEEEecCCCccee
Q 036387 184 ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV--RGG--GLFLSKGTGITEE 253 (334)
Q Consensus 184 ~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~--~~g--~i~~S~D~G~tW~ 253 (334)
.+++|+|.|+||+.-... +... .....| +.+ +|.+++.. ..+ .+|.|.|+|+||+
T Consensus 220 ~iiySdD~G~TW~ls~~~---~~~g--------c~EpsV--vEw--dG~Lmm~~R~~~g~R~Vy~S~D~G~TWt 278 (648)
T 1ms9_A 220 KIFYSEDEGKTWKFGKGR---SAFG--------CSEPVA--LEW--EGKLIINTRVDYRRRLVYESSDMGNTWL 278 (648)
T ss_dssp EEEEESSTTSSCEECSCC---CCTT--------EEEEEE--EEE--TTEEEEEEEETTSCCCEEEESSTTSSCE
T ss_pred eEEEecCCCCCEEECCCC---CCCC--------ccceEE--EEE--CCEEEEEEEccCCcEEEEEecCCCcccc
Confidence 688999999999985421 1110 111122 222 67776654 233 3999999999874
No 46
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.32 E-value=0.072 Score=46.55 Aligned_cols=222 Identities=13% Similarity=0.083 Sum_probs=122.5
Q ss_pred cceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCC
Q 036387 79 SLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSA 157 (334)
Q Consensus 79 a~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~ 157 (334)
..|.+|++... .+.|++-+-.| .++....+.. .....+|++.++ ..+|++.. .+.|++-.-.| .......+..
T Consensus 71 ~~g~l~v~~~~-~~~v~~~d~~g-~~~~~~~~~~-~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~~ 144 (300)
T 2qc5_A 71 SLGDIWFTENG-ANKIGKLSKKG-GFTEYPLPQP-DSGPYGITEGLN--GDIWFTQLNGDRIGKLTADG-TIYEYDLPNK 144 (300)
T ss_dssp TTSCEEEEETT-TTEEEEECTTS-CEEEEECSST-TCCEEEEEECST--TCEEEEETTTTEEEEECTTS-CEEEEECSST
T ss_pred CCCCEEEEecC-CCeEEEECCCC-CeEEecCCCC-CCCCccceECCC--CCEEEEccCCCeEEEECCCC-CEEEccCCCC
Confidence 34667766542 13466543333 4454443322 246788888753 56887765 45565533223 3443333321
Q ss_pred cccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE
Q 036387 158 EEEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL 235 (334)
Q Consensus 158 ~~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~ 235 (334)
. .....|.+++ +++|+... .+.|++-+-. .+...+..+ ... .....+.+.+++.+|+
T Consensus 145 ~-----~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~----~~~-----------~~~~~i~~d~~g~l~v 203 (300)
T 2qc5_A 145 G-----SYPAFITLGSDNALWFTENQNNSIGRITNT-GKLEEYPLP----TNA-----------AAPVGITSGNDGALWF 203 (300)
T ss_dssp T-----CCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEEEEECS----STT-----------CCEEEEEECTTSSEEE
T ss_pred C-----CCceeEEECCCCCEEEEecCCCeEEEECCC-CcEEEeeCC----CCC-----------CCcceEEECCCCCEEE
Confidence 1 1456777774 66887764 4567665543 345554322 110 0123455667788999
Q ss_pred EEcC-CeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEE
Q 036387 236 LVRG-GGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVK 313 (334)
Q Consensus 236 ~~~~-g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~ 313 (334)
+... +.|++-.-.|+ +.....+.......++++.+++.+|++.. .+.|++-.-.| ..+.+..+. ......+|.
T Consensus 204 ~~~~~~~i~~~~~~g~---~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~-~~~~~~~i~ 278 (300)
T 2qc5_A 204 VEIMGNKIGRITTTGE---ISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITNDN-TIQEYQLQT-ENAEPHGIT 278 (300)
T ss_dssp EETTTTEEEEECTTCC---EEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-CEEEEECCS-TTCCCCCEE
T ss_pred EccCCCEEEEEcCCCc---EEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECCCC-cEEEEECCc-cCCccceeE
Confidence 8754 45766554443 23333332223456788777788999864 35565543333 455544321 234578888
Q ss_pred EeeCCeEEEEeCCeeEEEEc
Q 036387 314 FINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 314 ~~~~~~~~a~G~~G~il~s~ 333 (334)
+.+++++|+++.+ .|.+.+
T Consensus 279 ~~~~g~l~v~~~~-~i~~~~ 297 (300)
T 2qc5_A 279 FGKDGSVWFALKC-KIGKLN 297 (300)
T ss_dssp ECTTSCEEEECSS-EEEEEE
T ss_pred eCCCCCEEEEccC-ceEEeC
Confidence 8888999998875 666654
No 47
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.24 E-value=0.058 Score=46.70 Aligned_cols=189 Identities=8% Similarity=0.111 Sum_probs=98.3
Q ss_pred eeEEEEEecCCCCEEEE-E-EcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCC
Q 036387 116 VLLDIAFVPDDLNHGFL-L-GTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAG 192 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~a-v-G~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG 192 (334)
...+|++.++ +++|+ + ...+.|++=..++........... ....+|.+++ +++|++...+.|++-+-.|
T Consensus 25 ~p~~i~~~~~--g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSA--GNVYVTSEGMYGRVVKLATGSTGTTVLPFNGL------YQPQGLAVDGAGTVYVTDFNNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTT--CCEEEEECSSSCEEEEECC-----EECCCCSC------CSCCCEEECTTCCEEEEETTTEEEEECTTC
T ss_pred CccceEECCC--CCEEEEccCCCCcEEEecCCCcccceEeeCCc------CCcceeEECCCCCEEEEcCCCEEEEEeCCC
Confidence 4577888753 45787 5 234566654433333333221111 1234677774 6688776566777665445
Q ss_pred CCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-CCeEEEecCCCcceeeEeccccCCCeeeEEEEe
Q 036387 193 ESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGY 271 (334)
Q Consensus 193 ~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~ 271 (334)
..-..+... + + .....+.+.+++.+|++.. .+.|++-.++... ...... .......++++
T Consensus 97 ~~~~~~~~~----~---~---------~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--~~~~~~-~~~~~p~~i~~ 157 (270)
T 1rwi_B 97 NNQTVLPFD----G---L---------NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT--QTVLPF-TGLNDPDGVAV 157 (270)
T ss_dssp SCCEECCCC----S---C---------SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS--CEECCC-CSCCSCCCEEE
T ss_pred ceEeeeecC----C---c---------CCCcceEECCCCCEEEEECCCCEEEEEECCCce--eEeecc-ccCCCceeEEE
Confidence 443333211 1 0 0123456667888998864 4567766444322 111111 11113456777
Q ss_pred ecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC-CeeEEEEc
Q 036387 272 RSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN-DGVLLQYL 333 (334)
Q Consensus 272 ~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~-~G~il~s~ 333 (334)
.+++.+|++.. .+.|++-.-.+..-..... .......+|++.+++++|++.. ++.|.+.+
T Consensus 158 ~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~ 219 (270)
T 1rwi_B 158 DNSGNVYVTDTDNNRVVKLEAESNNQVVLPF--TDITAPWGIAVDEAGTVYVTEHNTNQVVKLL 219 (270)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTTCCEEECCC--SSCCSEEEEEECTTCCEEEEETTTSCEEEEC
T ss_pred eCCCCEEEEECCCCEEEEEecCCCceEeecc--cCCCCceEEEECCCCCEEEEECCCCcEEEEc
Confidence 66778888754 3556544433332222222 1114678899888889998874 55666653
No 48
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.19 E-value=0.0077 Score=52.74 Aligned_cols=152 Identities=13% Similarity=0.173 Sum_probs=89.9
Q ss_pred eEEEEEEeC-CeEEEEEcCCEEEEE---cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCC
Q 036387 165 RFNSISFKG-KEGWIVGKPAILLHT---SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGG 240 (334)
Q Consensus 165 ~~~~I~~~~-~~~~~vG~~g~i~~S---~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g 240 (334)
.+.+++|++ ..+|++ ..|.||+= ++.+++|-.... .+ |. .-|. ....+.+.++|.+|++ .+|
T Consensus 42 ~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t--~I-G~-~Gw~--------~F~a~~fD~~G~LYav-~dG 107 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAK--KI-GN-GGWN--------QFQFLFFDPNGYLYAV-SKD 107 (236)
T ss_dssp TCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCE--EE-EC-SCGG--------GCSEEEECTTSCEEEE-ETT
T ss_pred cceeEEECCCccEEEE-eCCeEEEECCCCCCccccccccc--Ee-cc-cccc--------cceEEEECCCCCEEEe-CCC
Confidence 355788886 789999 87888883 333455543211 01 00 0111 1234566788999999 569
Q ss_pred eEEEecC---CCcceeeEeccccCCC-eeeEEEEeecCCeEEEEeCCCcEEEEc---CCCcCcEEcccCCC-cc-cceeE
Q 036387 241 GLFLSKG---TGITEEFEEVPVQSRG-FGILDVGYRSQDEAWAAGGSGVLLKTT---NGGKTWIREKAADN-IA-ANLYS 311 (334)
Q Consensus 241 ~i~~S~D---~G~tW~w~~~~~~~~~-~~~~~v~~~~~~~~~~~G~~G~i~~S~---DgG~tW~~~~~~~~-~~-~~l~~ 311 (334)
.|||-.. +..+|.-....+...+ ..+..|.|.+++.+|++. +|.+|+.. ..+.+|......-. .. ..+.-
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKF 186 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEE
Confidence 9988654 3345421111111111 235677788899999999 88887764 46778843222100 11 23344
Q ss_pred EEEeeCCeEEEEeCCeeEEEE
Q 036387 312 VKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 312 i~~~~~~~~~a~G~~G~il~s 332 (334)
+.|.+++++|++- +|.|++-
T Consensus 187 l~f~~~G~l~~v~-~g~~Y~~ 206 (236)
T 1tl2_A 187 LFFSSVGTLFGVQ-GGKFYED 206 (236)
T ss_dssp EEECTTSCEEEEE-TTEEEEE
T ss_pred EEECCCCcEEEEe-CCeEEec
Confidence 5577899999998 8888874
No 49
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=97.18 E-value=0.0012 Score=62.64 Aligned_cols=99 Identities=14% Similarity=0.156 Sum_probs=52.1
Q ss_pred EEEEcCCCcCeEeCcCCCCc--ccCcce-eE-----EEEEEeCCeEEEE--Ec-----C----CEEEEEcCCCCCeEEee
Q 036387 139 LLETKDGGKTWAPRSIPSAE--EEDFNY-RF-----NSISFKGKEGWIV--GK-----P----AILLHTSDAGESWERIP 199 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~p~~~--~~~~~~-~~-----~~I~~~~~~~~~v--G~-----~----g~i~~S~DgG~TW~~~~ 199 (334)
+.+|+|+|.||.....+... ..+... .+ ..|...+.++++- +. . ..+++|+| |+||+.-.
T Consensus 141 lv~S~D~G~tWs~~~~~~~~~~~~~~~~~~~~~g~G~GI~l~~G~Lv~P~~~~~~~~~~~~~~s~~iyS~D-G~tW~~~~ 219 (379)
T 3sil_A 141 LYKSTDDGVTFSKVETNIHDIVTKNGTISAMLGGVGSGLQLNDGKLVFPVQMVRTKNITTVLNTSFIYSTD-GITWSLPS 219 (379)
T ss_dssp EEEESSTTSCCEEECCSHHHHHHHHCSEEEEEECSEECEECTTSCEEEEEEEEECTTSSCSEEEEEEEESS-SSSEECCS
T ss_pred EEEccCCCCcCCCCcccccccccccceeeeecCCCCceEEEcCCcEEEEEEEeeccCCCCCEEEEEEEcCC-CCCeEECC
Confidence 68899999999885422110 000000 11 1232333444331 11 1 36889999 99998643
Q ss_pred cCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC---CeEEEecCCCccee
Q 036387 200 LSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG---GGLFLSKGTGITEE 253 (334)
Q Consensus 200 ~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~---g~i~~S~D~G~tW~ 253 (334)
. ++... .....+ +. . +|.+++.... ..+++|.|+|+||+
T Consensus 220 ~---~~~~~--------~~ep~v--vE-~-dG~L~m~~R~~g~r~v~~S~D~G~tWt 261 (379)
T 3sil_A 220 G---YCEGF--------GSENNI--IE-F-NASLVNNIRNSGLRRSFETKDFGKTWT 261 (379)
T ss_dssp C---CEECT--------TCCEEE--EE-E-TTEEEEEECCSSBCBCEEESSSSSCCE
T ss_pred C---CCCcc--------CCCCEE--EE-E-CCEEEEEEEeCCCEEEEEEcCCCccCC
Confidence 2 11000 011122 22 2 6777776543 24899999999875
No 50
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.04 E-value=0.15 Score=44.72 Aligned_cols=191 Identities=10% Similarity=0.017 Sum_probs=104.6
Q ss_pred eeEEEEEecCCCCEEEEEEc--CCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEc-CCEEEEEcCC
Q 036387 116 VLLDIAFVPDDLNHGFLLGT--RQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGK-PAILLHTSDA 191 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~--~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~~S~Dg 191 (334)
...+|++.+ ..+++|++.. .+.|++=+-.|+.-.....+.. ....+|.+++ +++|++.. .+.|++-+-.
T Consensus 78 ~p~~i~~~~-~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 150 (286)
T 1q7f_A 78 YPNRVAVVR-NSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL------QHPRGVTVDNKGRIIVVECKVMRVIIFDQN 150 (286)
T ss_dssp SEEEEEEET-TTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC------SCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CceEEEEEc-CCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC------CCceEEEEeCCCCEEEEECCCCEEEEEcCC
Confidence 467888853 2467888763 4555543333443333222211 1356788875 67777754 4566665544
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-CCeEEEecCCCcceeeEeccccCCCeeeEEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
|+....+.... . + .....+.+.+++.+|++.. ++.|++-.-.|+. ...+..........+++
T Consensus 151 g~~~~~~~~~~----~--~---------~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 151 GNVLHKFGCSK----H--L---------EFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY--LRQIGGEGITNYPIGVG 213 (286)
T ss_dssp SCEEEEEECTT----T--C---------SSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE--EEEESCTTTSCSEEEEE
T ss_pred CCEEEEeCCCC----c--c---------CCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE--EEEEccCCccCCCcEEE
Confidence 55444433211 0 0 0123466677888888864 4556554434431 22222221112456788
Q ss_pred eecCCeEEEEeCC-C-cEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEE
Q 036387 271 YRSQDEAWAAGGS-G-VLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQ 331 (334)
Q Consensus 271 ~~~~~~~~~~G~~-G-~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~ 331 (334)
+.+++.+|++... + .|.+-.-.|+.-..+... .......+|++.+++++|++..++.|..
T Consensus 214 ~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~-~~~~~~~~i~~~~~g~l~vs~~~~~v~v 275 (286)
T 1q7f_A 214 INSNGEILIADNHNNFNLTIFTQDGQLISALESK-VKHAQCFDVALMDDGSVVLASKDYRLYI 275 (286)
T ss_dssp ECTTCCEEEEECSSSCEEEEECTTSCEEEEEEES-SCCSCEEEEEEETTTEEEEEETTTEEEE
T ss_pred ECCCCCEEEEeCCCCEEEEEECCCCCEEEEEccc-CCCCcceeEEECCCCcEEEECCCCeEEE
Confidence 8778889988653 2 554443345433344332 1123467899998999999987776643
No 51
>1ms9_A Trans-sialidase; trans-glycosylation, protein-acrbohydrate interac beta-propeller, hydrolase; HET: LAT; 1.58A {Trypanosoma cruzi} SCOP: b.29.1.15 b.68.1.1 PDB: 1ms0_A* 1mr5_A* 1ms1_A 1ms4_A 1ms8_A* 1ms3_A* 2ah2_A* 3b69_A* 3opz_A 3pjq_A* 1s0i_A* 1s0j_A* 1ms5_A 1wcs_A 2ags_A* 2a75_A* 2fhr_A* 1n1t_A* 1n1s_A* 1n1v_A* ...
Probab=97.01 E-value=0.01 Score=59.85 Aligned_cols=59 Identities=15% Similarity=0.173 Sum_probs=35.9
Q ss_pred eEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEE--eCCC--cEEEEcCCCcCcEEccc
Q 036387 241 GLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAA--GGSG--VLLKTTNGGKTWIREKA 301 (334)
Q Consensus 241 ~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~--G~~G--~i~~S~DgG~tW~~~~~ 301 (334)
.+++|.|.|+||+......+. +-.--.|.-. ++.+++. ...| .+|+|.|+|+||.....
T Consensus 220 ~iiySdD~G~TW~ls~~~~~~-gc~EpsVvEw-dG~Lmm~~R~~~g~R~Vy~S~D~G~TWte~~~ 282 (648)
T 1ms9_A 220 KIFYSEDEGKTWKFGKGRSAF-GCSEPVALEW-EGKLIINTRVDYRRRLVYESSDMGNTWLEAVG 282 (648)
T ss_dssp EEEEESSTTSSCEECSCCCCT-TEEEEEEEEE-TTEEEEEEEETTSCCCEEEESSTTSSCEECTT
T ss_pred eEEEecCCCCCEEECCCCCCC-CccceEEEEE-CCEEEEEEEccCCcEEEEEecCCCcccccccc
Confidence 477899999998665432221 1011122222 4666654 2234 49999999999998653
No 52
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.00 E-value=0.0034 Score=55.00 Aligned_cols=106 Identities=8% Similarity=0.067 Sum_probs=70.7
Q ss_pred EeeeeEeecCCEEEEEcCCeEEEecC---CCcceeeEec--cccCCC-eeeEEEEeecCCeEEEEeCCCcEEEEc---CC
Q 036387 222 IQNMGWRADGGLWLLVRGGGLFLSKG---TGITEEFEEV--PVQSRG-FGILDVGYRSQDEAWAAGGSGVLLKTT---NG 292 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~~g~i~~S~D---~G~tW~w~~~--~~~~~~-~~~~~v~~~~~~~~~~~G~~G~i~~S~---Dg 292 (334)
+..+.|.+++.+|++ ..|.+|+-.. .+..| -.. .+...+ ..+.++.|.+++.+|++ .+|.|||-. ++
T Consensus 43 ~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W--~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~ 118 (236)
T 1tl2_A 43 FKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNW--MGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASPPQSD 118 (236)
T ss_dssp CSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCH--HHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESCCCST
T ss_pred ceeEEECCCccEEEE-eCCeEEEECCCCCCcccc--cccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCCCcCC
Confidence 345788889999999 7888988443 33444 222 111111 13467777788999998 559998754 56
Q ss_pred CcCcEEcccC--CCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 293 GKTWIREKAA--DNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 293 G~tW~~~~~~--~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
..+|-..... ...=..+..|.+.+++.+|++. +|.++|.
T Consensus 119 ~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~ 159 (236)
T 1tl2_A 119 TDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKA 159 (236)
T ss_dssp TCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEE
T ss_pred CCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEec
Confidence 6788444220 0111478899999999999999 9988774
No 53
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.97 E-value=0.18 Score=51.36 Aligned_cols=201 Identities=12% Similarity=0.064 Sum_probs=103.0
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCC-cccCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSA-EEEDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAG 192 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~-~~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG 192 (334)
..+.+|..+ +.+.+|+.... .|++=.-....++....... ........+.+|..+. +.+|+....| +.+... .
T Consensus 232 ~~i~~i~~d--~~g~lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWiGT~~G-l~~~~~-~ 306 (758)
T 3ott_A 232 NSIKSLALD--GNGDLLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHNIWLGTDYG-ISLSRY-N 306 (758)
T ss_dssp EEEEEEEEC--TTCCEEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCCEEEEESSS-EEEECC-C
T ss_pred CeEEEEEEc--CCCCEEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCCEEEEeCCc-cccccc-C
Confidence 456777765 45778876644 45543333345654321110 0001112467776664 6788887666 444333 3
Q ss_pred CCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEEEecCC-Cc--ceeeEeccc-c--CCCeee
Q 036387 193 ESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLSKGT-GI--TEEFEEVPV-Q--SRGFGI 266 (334)
Q Consensus 193 ~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~S~D~-G~--tW~w~~~~~-~--~~~~~~ 266 (334)
..++...... ..+.. . ...+..+....+|.+|+.+.. ++++-.+. ++ ...+..... + .....+
T Consensus 307 ~~~~~~~~~~-~~~~~----~-----~~~v~~i~~D~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 375 (758)
T 3ott_A 307 SALQFIPISQ-ITGTG----D-----GNQFYSLFRDSKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRI 375 (758)
T ss_dssp C-CEEEEHHH-HSCSC----C-----CCBEEEEEECTTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCE
T ss_pred CceeEEeccc-CCCCC----C-----CceEEEEEEcCCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCce
Confidence 3455443210 00000 0 012333444567889999854 66665433 21 111222111 0 011246
Q ss_pred EEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCC----cccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 267 LDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADN----IAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~----~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
.++....++.+|+... +.|++-.-....++.+..... ....+++|....++++|+.+..|.|++.
T Consensus 376 ~~i~~d~~g~lWigt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~~Gl~~~ 444 (758)
T 3ott_A 376 RHIYEDKEQQLWIATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCLGGIFVV 444 (758)
T ss_dssp EEEEECTTSCEEEEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESSSCEEEE
T ss_pred EEEEECCCCCEEEEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECCCceEEE
Confidence 7776666789999764 456555433456776642111 1245788887778999998865445543
No 54
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.89 E-value=0.021 Score=51.06 Aligned_cols=101 Identities=10% Similarity=0.100 Sum_probs=47.4
Q ss_pred ceeEEEecCCCccceEEecCCCC-CcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEE-cCCCcCeEeCcCCCC
Q 036387 80 LSISLAATTGLYEQPAKSEEALS-AWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLET-KDGGKTWAPRSIPSA 157 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~-tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S-~DgG~TW~~~~~p~~ 157 (334)
.|.+|+.+.. +.|++-...|+ .|+.. .+ ...+.++.+.+ .+.+|+. ..+ |++= .++..-|+... +..
T Consensus 30 ~g~l~v~t~~--~~l~~~d~~g~~~~~~~-~~---~~~~~~~~~~~--~g~l~v~-t~~-l~~~d~~g~~~~~~~~-~~~ 98 (330)
T 3hxj_A 30 NGTIYLGSSN--KNLYAINTDGSVKWFFK-SG---EIIECRPSIGK--DGTIYFG-SDK-VYAINPDGTEKWRFDT-KKA 98 (330)
T ss_dssp TSCEECSSTT--TTTEEECTTSCEEESSC-GG---GEEEECCEETT--TTEECCS-SCE-EEEECCCGGGGGGSCC----
T ss_pred CCeEEEEcCC--CEEEEECCCCcEEEEEe-cC---CCcccceEEec--CCcEEEe-cCc-EEEECCCCcEEEEEEC-CCC
Confidence 4555655433 34554333333 46532 11 23456666642 3667764 444 5443 34455565322 111
Q ss_pred cccCcceeEEEEEEeCCeEEEEEcCCEEEEEcCCC-CCeEEe
Q 036387 158 EEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAG-ESWERI 198 (334)
Q Consensus 158 ~~~~~~~~~~~I~~~~~~~~~vG~~g~i~~S~DgG-~TW~~~ 198 (334)
......+.++.+|+....+.|++-+-.| ..|+..
T Consensus 99 -------~~~~~~~~~~~l~v~t~~~~l~~~d~~g~~~~~~~ 133 (330)
T 3hxj_A 99 -------IVSDFTIFEDILYVTSMDGHLYAINTDGTEKWRFK 133 (330)
T ss_dssp ---------CCEEEETTEEEEECTTSEEEEECTTSCEEEEEE
T ss_pred -------cccCceEECCEEEEEecCCEEEEEcCCCCEEEEEc
Confidence 1112223367788777667666654333 446553
No 55
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.89 E-value=0.35 Score=49.24 Aligned_cols=216 Identities=10% Similarity=0.095 Sum_probs=115.2
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccC-CCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIP-VDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAE 158 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p-~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~ 158 (334)
.|.+|+++.. +|.|= | |.+++....+ ......+.+|... ..+.+|+....| |++=.-.-..++. +...
T Consensus 32 ~G~lWigT~~---GL~ry-D-G~~~~~~~~~~~~~~~~i~~i~~d--~~g~lWigT~~G-l~~yd~~~~~f~~---~~~~ 100 (758)
T 3ott_A 32 EGLIWIGSNK---GLFSY-D-GYSTQQHFTYGENNNTRIYCGVII--DNTYLYMGTDNG-ILVYNYRADRYEQ---PETD 100 (758)
T ss_dssp TSCEEEEESS---CEEEE-C-SSCEEECSCTTSTTSSCEEEEEEE--TTTEEEEEETTE-EEEEETTTTEECC---CSCC
T ss_pred CCCEEEEECC---Ccccc-C-CCceEEEEccCCCCCceEEEEEEc--CCCcEEEEeCCC-eEEEeCCCCEEEC---cccC
Confidence 4567877654 37653 4 5666654322 1122467787776 347888766555 4442222223433 1110
Q ss_pred ccCcceeEEEEEEeCCeEEEEEcCCEEEEEcCCCCCeEEeecC-CCCCCCcccccccCccccceEeeeeEeecCCEEEEE
Q 036387 159 EEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGESWERIPLS-SQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV 237 (334)
Q Consensus 159 ~~~~~~~~~~I~~~~~~~~~vG~~g~i~~S~DgG~TW~~~~~~-~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~ 237 (334)
. ...+..|...++.+|+.... +|++-+....+++.+... ..++. ..+..+....++.+|+.+
T Consensus 101 ~---~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~-------------~~i~~i~~d~~g~lWigt 163 (758)
T 3ott_A 101 F---PTDVRTMALQGDTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPN-------------NTIYSIIRTKDNQIYVGT 163 (758)
T ss_dssp C---CSCEEEEEEETTEEEEEETT-EEEEEETTTCCEEEECHHHHCCSC-------------SCEEEEEECTTCCEEEEE
T ss_pred C---CceEEEEEecCCcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCC-------------CeEEEEEEcCCCCEEEEe
Confidence 0 11355555456788887765 677765555667765211 01111 123334445578899987
Q ss_pred cCCeEEEecCCCcceeeEeccccCC----CeeeEEEEeecC-CeEEEEeCCCcEEEEcCCCcCcEEcccCCCcccceeEE
Q 036387 238 RGGGLFLSKGTGITEEFEEVPVQSR----GFGILDVGYRSQ-DEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSV 312 (334)
Q Consensus 238 ~~g~i~~S~D~G~tW~w~~~~~~~~----~~~~~~v~~~~~-~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i 312 (334)
. +++++-..... +++....+.. ...+.++..... +.+|+... +.+++-.-....++.... .....+++|
T Consensus 164 ~-~Gl~~~~~~~~--~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~--l~~~~i~~i 237 (758)
T 3ott_A 164 Y-NGLCRYIPSNG--KFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEA--FHNNSIKSL 237 (758)
T ss_dssp T-TEEEEEETTTT--EEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEE--EEEEEEEEE
T ss_pred C-CCHhhCccCCC--ceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccC--CCCCeEEEE
Confidence 5 46766544333 2444332211 113556655443 46898664 445444323344555433 123467888
Q ss_pred EEeeCCeEEEEeCCeeE
Q 036387 313 KFINEKKGFVLGNDGVL 329 (334)
Q Consensus 313 ~~~~~~~~~a~G~~G~i 329 (334)
....++++|+...+|+.
T Consensus 238 ~~d~~g~lWigT~~Gl~ 254 (758)
T 3ott_A 238 ALDGNGDLLAGTDNGLY 254 (758)
T ss_dssp EECTTCCEEEEETTEEE
T ss_pred EEcCCCCEEEEeCCcee
Confidence 87778999999887753
No 56
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.66 E-value=0.29 Score=42.66 Aligned_cols=189 Identities=10% Similarity=0.014 Sum_probs=99.4
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcCCEEEEEcCCCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSDAGE 193 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~g~i~~S~DgG~ 193 (334)
..+.+++|.| +.+.+++++.+|.+.. ......+.+.+..-..+ ...+.++.++++.++..+..+.|..-+ .+
T Consensus 60 ~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~l~~~~~d~~i~~~d-~~- 132 (313)
T 3odt_A 60 GFLNSVCYDS-EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGH----QGNVCSLSFQDGVVISGSWDKTAKVWK-EG- 132 (313)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCC----SSCEEEEEEETTEEEEEETTSEEEEEE-TT-
T ss_pred ccEEEEEECC-CCCEEEEecCCCeEEEEEeeecCCCCcccchhhc----ccCEEEEEecCCEEEEEeCCCCEEEEc-CC-
Confidence 5789999998 5566666666776421 12222222222110111 124678888666666666677665543 21
Q ss_pred CeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEE-EEcCCeEEEecCCCcceeeEeccccCCCeeeEEEEe
Q 036387 194 SWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWL-LVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGY 271 (334)
Q Consensus 194 TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~-~~~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~ 271 (334)
+.+..- ..+. ..+..+.+.+ ++..++ .+.++.+..-. .++. ....... ....+..+.+
T Consensus 133 --~~~~~~----------~~~~----~~v~~~~~~~~~~~~l~~~~~d~~i~i~d-~~~~--~~~~~~~-~~~~i~~~~~ 192 (313)
T 3odt_A 133 --SLVYNL----------QAHN----ASVWDAKVVSFSENKFLTASADKTIKLWQ-NDKV--IKTFSGI-HNDVVRHLAV 192 (313)
T ss_dssp --EEEEEE----------ECCS----SCEEEEEEEETTTTEEEEEETTSCEEEEE-TTEE--EEEECSS-CSSCEEEEEE
T ss_pred --cEEEec----------ccCC----CceeEEEEccCCCCEEEEEECCCCEEEEe-cCce--EEEEecc-CcccEEEEEE
Confidence 221110 0010 1233455555 555544 44455554332 2221 1111211 1235778888
Q ss_pred ecCCeEEEEeCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEEc
Q 036387 272 RSQDEAWAAGGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 272 ~~~~~~~~~G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s~ 333 (334)
.+++.+++.+.+|.|. .....++.-..+.. ....+.++.+.+++++++++.+|.|..++
T Consensus 193 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~dg~v~iwd 252 (313)
T 3odt_A 193 VDDGHFISCSNDGLIKLVDMHTGDVLRTYEG---HESFVYCIKLLPNGDIVSCGEDRTVRIWS 252 (313)
T ss_dssp EETTEEEEEETTSEEEEEETTTCCEEEEEEC---CSSCEEEEEECTTSCEEEEETTSEEEEEC
T ss_pred cCCCeEEEccCCCeEEEEECCchhhhhhhhc---CCceEEEEEEecCCCEEEEecCCEEEEEE
Confidence 8788866666677652 23333443333322 23579999999888888889999887653
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.54 E-value=0.41 Score=42.89 Aligned_cols=193 Identities=11% Similarity=0.207 Sum_probs=95.4
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeCcCCCCcccCcceeEEEEEEe-C--CeEEE-EEcCCE--EE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPRSIPSAEEEDFNYRFNSISFK-G--KEGWI-VGKPAI--LL 186 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~-~--~~~~~-vG~~g~--i~ 186 (334)
..+.+++|.| +.+.+..++.+|.| |... +.+++.+..-..+ ...+.+|.+. + ...++ ++..+. |+
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~--~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 12 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGH----EGPVWRVDWAHPKFGTILASCSYDGKVLIW 84 (379)
T ss_dssp CCEEEEEECS-SSSEEEEEETTSCEEEEEEE--TTEEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred ccEEEEEEcC-CCCEEEEEECCCcEEEEecC--CCcceeeeEecCC----CCcEEEEEeCCCCCCCEEEEeccCCEEEEE
Confidence 5789999987 44555545566753 3332 2234433211111 1247788885 3 34444 444553 33
Q ss_pred EEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEEE-EcCCeEEE-ecCCCcceeeEeccccCC
Q 036387 187 HTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWLL-VRGGGLFL-SKGTGITEEFEEVPVQSR 262 (334)
Q Consensus 187 ~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~~-~~~g~i~~-S~D~G~tW~w~~~~~~~~ 262 (334)
.... ..|..+... .+ | ...+..+.+.++ +..+++ +.++.|.. ....+... ........
T Consensus 85 d~~~--~~~~~~~~~---~~-------~----~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~ 146 (379)
T 3jrp_A 85 KEEN--GRWSQIAVH---AV-------H----SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--SPIIIDAH 146 (379)
T ss_dssp EEET--TEEEEEEEE---CC-------C----SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC--CEEEEECC
T ss_pred EcCC--CceeEeeee---cC-------C----CcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce--eeEEecCC
Confidence 3332 234443321 10 1 113556777776 665554 45555432 22222111 11111111
Q ss_pred CeeeEEEEeec-------------CCeEE-EEeCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeC---CeEEE-
Q 036387 263 GFGILDVGYRS-------------QDEAW-AAGGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINE---KKGFV- 322 (334)
Q Consensus 263 ~~~~~~v~~~~-------------~~~~~-~~G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~---~~~~a- 322 (334)
...+..+.|.+ ++..+ .++.+|.| |....+...++.+..-..-...+.+++|.++ +..++
T Consensus 147 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 226 (379)
T 3jrp_A 147 AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 226 (379)
T ss_dssp TTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred CCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEE
Confidence 22577888876 34444 44556755 4444455556555432122357999999887 56555
Q ss_pred EeCCeeEEEE
Q 036387 323 LGNDGVLLQY 332 (334)
Q Consensus 323 ~G~~G~il~s 332 (334)
++.+|.|..+
T Consensus 227 ~~~dg~i~iw 236 (379)
T 3jrp_A 227 VSQDRTCIIW 236 (379)
T ss_dssp EETTSCEEEE
T ss_pred EeCCCEEEEE
Confidence 4578876543
No 58
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.49 E-value=0.47 Score=42.97 Aligned_cols=191 Identities=13% Similarity=0.234 Sum_probs=96.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCe--EEEEcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC-CeEEEE-EcCCE--EEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQT--LLETKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAI--LLH 187 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~--i~~S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~--i~~ 187 (334)
..+..++|.| |.+.+..++.++. ||.... + .|.... ....+ ...+.+|.|.+ +..++. +..+. |+.
T Consensus 17 ~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~-~-~~~~~~~~~~~h----~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 17 SRCWFLAWNP-AGTLLASCGGDRRIRIWGTEG-D-SWICKSVLSEGH----QRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSCEEEEEEET-T-EEEEEEEECSSC----SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CcEEEEEECC-CCCEEEEEcCCCeEEEEEcCC-C-cceeeeeecccc----CCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 3688899988 4555555566675 444332 2 343221 11111 12578899985 444444 44443 333
Q ss_pred EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEecc-ccCCCe
Q 036387 188 TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVP-VQSRGF 264 (334)
Q Consensus 188 S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~-~~~~~~ 264 (334)
.. ...++.+.. +.+ |. ..+..+.|.+++..++.+ .++.|. +..+.+... ..+. +.....
T Consensus 90 ~~--~~~~~~~~~---~~~-------h~----~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~h~~ 151 (345)
T 3fm0_A 90 KN--QDDFECVTT---LEG-------HE----NEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY--ECVSVLNSHTQ 151 (345)
T ss_dssp EC--CC-EEEEEE---ECC-------CS----SCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE--EEEEEECCCCS
T ss_pred cc--CCCeEEEEE---ccC-------CC----CCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe--EEEEEecCcCC
Confidence 22 123333221 111 11 135667888888766654 455442 222333321 2111 111122
Q ss_pred eeEEEEeecCCeEEEE-eCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAA-GGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+..+.|.+++..+++ +.++.| |.... ..|.....-..-...+.+++|.++++.+++ +.+|.|..+
T Consensus 152 ~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~--~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 152 DVKHVVWHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEEEET--TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEecC--CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 5778888776665555 456655 33322 235433221122357999999987776654 578876543
No 59
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.30 E-value=0.49 Score=41.19 Aligned_cols=195 Identities=8% Similarity=-0.010 Sum_probs=102.6
Q ss_pred eeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEe--CCeEEEEEc--CCEEEEEcC
Q 036387 116 VLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFK--GKEGWIVGK--PAILLHTSD 190 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~--~~~~~~vG~--~g~i~~S~D 190 (334)
...+|++.++ +.+|++.. .+.|.+=.-.|+.-........... .......|.+. ++++|++.. .+.|++-+-
T Consensus 31 ~p~~v~~~~~--g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~-~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~ 107 (286)
T 1q7f_A 31 EPSGVAVNAQ--NDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDS-QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 107 (286)
T ss_dssp CEEEEEECTT--CCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTT-CBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred CCceEEECCC--CCEEEEECCCCEEEEECCCCcEEEEecccCCCcc-cccCceEEEEEcCCCeEEEEcCCCCCEEEEECC
Confidence 4577888753 56777753 4555443222443322221111000 01135678884 377888763 566666554
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-CCeEEEecCCCcceeeEeccccCCCeeeEEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-GGGLFLSKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
.|+.-..+... . + .....+.+.+++.+|++.. ++.|++-.-.|+. ..............++
T Consensus 108 ~g~~~~~~~~~----~---~---------~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--~~~~~~~~~~~~p~~i 169 (286)
T 1q7f_A 108 YGQFVRKFGAT----I---L---------QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNV--LHKFGCSKHLEFPNGV 169 (286)
T ss_dssp TSCEEEEECTT----T---C---------SCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--EEEEECTTTCSSEEEE
T ss_pred CCcEEEEecCc----c---C---------CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCE--EEEeCCCCccCCcEEE
Confidence 45543333221 0 0 0123466677888998864 4567655444442 2222221111235688
Q ss_pred EeecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCC-e-eEEEE
Q 036387 270 GYRSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGND-G-VLLQY 332 (334)
Q Consensus 270 ~~~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~-G-~il~s 332 (334)
++.+++.+|++.. .+.|++-.-.|+.-..+... .......+|++.+++++|++... + .|.+.
T Consensus 170 ~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~-g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~ 234 (286)
T 1q7f_A 170 VVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGE-GITNYPIGVGINSNGEILIADNHNNFNLTIF 234 (286)
T ss_dssp EECSSSEEEEEEGGGTEEEEEETTCCEEEEESCT-TTSCSEEEEEECTTCCEEEEECSSSCEEEEE
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCCEEEEEccC-CccCCCcEEEECCCCCEEEEeCCCCEEEEEE
Confidence 8887888998754 45554433334433333321 11245778999888899988743 2 56554
No 60
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.26 E-value=0.45 Score=43.06 Aligned_cols=219 Identities=11% Similarity=0.070 Sum_probs=101.3
Q ss_pred ceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEE
Q 036387 93 QPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISF 171 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~ 171 (334)
.||...++ .|+.+..-......+.+++|.| +.+.++.++.++.|.. ..+.++.|........+. ..+.++.+
T Consensus 36 ~iw~~~~~--~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~----~~v~~~~~ 108 (377)
T 3dwl_C 36 ELYEQDGN--GWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLN----RAATFVRW 108 (377)
T ss_dssp CEEEEETT--EEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC------CCCCEEECCCCS----SCEEEEEC
T ss_pred EEEEccCC--ceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccC----CceEEEEE
Confidence 34544432 3444432222236789999987 4455555566665422 233344454332211111 25778888
Q ss_pred eC-Ce-EEEEEcCCEEEE-EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeE--EEe
Q 036387 172 KG-KE-GWIVGKPAILLH-TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGL--FLS 245 (334)
Q Consensus 172 ~~-~~-~~~vG~~g~i~~-S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i--~~S 245 (334)
.+ .. ++.++..+.|.. ..+.++.|..+.. +.+ +|. ..+..+.+.+++..++++ .++.| |-.
T Consensus 109 ~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~---~~~------~h~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 109 SPNEDKFAVGSGARVISVCYFEQENDWWVSKH---LKR------PLR----STILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CTTSSCCEEEESSSCEEECCC-----CCCCEE---ECS------SCC----SCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred CCCCCEEEEEecCCeEEEEEECCcccceeeeE---eec------ccC----CCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 75 34 444444554432 2233333332221 110 011 135667778877765544 45544 322
Q ss_pred cCCCc-------ce-----eeEec-cccCCCeeeEEEEeecCCeEEEE-eCCCcE--EEEcCCCcCcEEcccCCCcccce
Q 036387 246 KGTGI-------TE-----EFEEV-PVQSRGFGILDVGYRSQDEAWAA-GGSGVL--LKTTNGGKTWIREKAADNIAANL 309 (334)
Q Consensus 246 ~D~G~-------tW-----~w~~~-~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l 309 (334)
..... .| .-..+ .. .....+.++.|.+++..+++ +.+|.| |...++....+.+..-......+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v 254 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPL 254 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCE
T ss_pred EecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCce
Confidence 11110 00 00011 11 11225788888877665554 556654 44443322222122211123568
Q ss_pred eEEEEeeCCeEEEEeCCeeEEEE
Q 036387 310 YSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 310 ~~i~~~~~~~~~a~G~~G~il~s 332 (334)
.++.|.++++.+++|.++.++.+
T Consensus 255 ~~~~~s~~~~~l~~~~~~~~~~~ 277 (377)
T 3dwl_C 255 RSLLWANESAIVAAGYNYSPILL 277 (377)
T ss_dssp EEEEEEETTEEEEEESSSSEEEE
T ss_pred EEEEEcCCCCEEEEEcCCcEEEE
Confidence 99999999999998877665544
No 61
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=96.26 E-value=0.59 Score=41.66 Aligned_cols=226 Identities=13% Similarity=0.065 Sum_probs=113.0
Q ss_pred ceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCC-----eEEEE-cCCCcCeEeCc
Q 036387 80 LSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQ-----TLLET-KDGGKTWAPRS 153 (334)
Q Consensus 80 ~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g-----~i~~S-~DgG~TW~~~~ 153 (334)
.|.+|+++.. .+.|++=.-.+...+.+..... ..+.+|++.++ ..+|++.... .|++= .++++ -+...
T Consensus 55 ~g~l~~~~~~-~~~i~~~d~~~~~~~~~~~~~~--~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~-~~~~~ 128 (333)
T 2dg1_A 55 QGQLFLLDVF-EGNIFKINPETKEIKRPFVSHK--ANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDN-LQDII 128 (333)
T ss_dssp TSCEEEEETT-TCEEEEECTTTCCEEEEEECSS--SSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCS-CEEEE
T ss_pred CCCEEEEECC-CCEEEEEeCCCCcEEEEeeCCC--CCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCE-EEEEE
Confidence 3455554332 1345554333444544432222 46788999763 5677776432 55543 34443 33221
Q ss_pred CCCCcccCcceeEEEEEEeC-CeEEEEEc-------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeee
Q 036387 154 IPSAEEEDFNYRFNSISFKG-KEGWIVGK-------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNM 225 (334)
Q Consensus 154 ~p~~~~~~~~~~~~~I~~~~-~~~~~vG~-------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~ 225 (334)
..... ...+..|.+++ +++|+... .+.|++-+-.+...+.+.... . ....+
T Consensus 129 ~~~~~----~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~---------------~~~~i 187 (333)
T 2dg1_A 129 EDLST----AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNI--S---------------VANGI 187 (333)
T ss_dssp CSSSS----CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEE--S---------------SEEEE
T ss_pred ccCcc----CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCC--C---------------cccce
Confidence 11110 12467888875 67787654 256777654444455443110 0 12235
Q ss_pred eEeecCC-EEEEEc-CCeEEEec-C-CCcce-eeE-ec--cccCCCeeeEEEEeecCCeEEEEeC-CCcEEEEcCCCcCc
Q 036387 226 GWRADGG-LWLLVR-GGGLFLSK-G-TGITE-EFE-EV--PVQSRGFGILDVGYRSQDEAWAAGG-SGVLLKTTNGGKTW 296 (334)
Q Consensus 226 ~~~~~g~-~~~~~~-~g~i~~S~-D-~G~tW-~w~-~~--~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S~DgG~tW 296 (334)
.+.+++. +|++.. .+.|++-. + .|... .+. .. .... .....++.+.+++.+|++.. .+.|++-.-.|+.-
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~g~~~ 266 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKRGYPI 266 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEEEEBTTCCEEEEEETTTEEEEECTTSCEE
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCceEECCCCCEEEEEcCCCEEEEECCCCCEE
Confidence 5677776 666653 45555332 1 33321 111 11 1111 12345677777788998753 45565443345544
Q ss_pred EEcccCCCcc---cceeEEEEeeC-CeEEEEeCC------eeEEEEc
Q 036387 297 IREKAADNIA---ANLYSVKFINE-KKGFVLGND------GVLLQYL 333 (334)
Q Consensus 297 ~~~~~~~~~~---~~l~~i~~~~~-~~~~a~G~~------G~il~s~ 333 (334)
+.+..+.... ....+++|.++ +++|+++.+ |.|++.+
T Consensus 267 ~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 267 GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEE
T ss_pred EEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEe
Confidence 4444421100 14678888765 478888766 4677653
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.22 E-value=0.63 Score=41.64 Aligned_cols=191 Identities=14% Similarity=0.163 Sum_probs=98.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEE-EEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAIL-LHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i-~~S~ 189 (334)
..+.+++|.| +.+.++.++.+|.| |.. +.++ +......... ...+.++.+.+ +..+++ +..+.| +...
T Consensus 53 ~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~-~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~ 125 (372)
T 1k8k_C 53 GQVTGVDWAP-DSNRIVTCGTDRNAYVWTL-KGRT-WKPTLVILRI----NRAARCVRWAPNEKKFAVGSGSRVISICYF 125 (372)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEEE-ETTE-EEEEEECCCC----SSCEEEEEECTTSSEEEEEETTSSEEEEEE
T ss_pred CcccEEEEeC-CCCEEEEEcCCCeEEEEEC-CCCe-eeeeEEeecC----CCceeEEEECCCCCEEEEEeCCCEEEEEEe
Confidence 5789999998 55666666666753 333 2232 3322111111 12477888875 444444 444533 2223
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEEec-------------------CCC
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFLSK-------------------GTG 249 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~S~-------------------D~G 249 (334)
+.++.|....... . .|. ..+..+.+.+++..++++ .++.+..-. ..+
T Consensus 126 ~~~~~~~~~~~~~--~-------~~~----~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (372)
T 1k8k_C 126 EQENDWWVCKHIK--K-------PIR----STVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 192 (372)
T ss_dssp ETTTTEEEEEEEC--T-------TCC----SCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTT
T ss_pred cCCCcceeeeeee--c-------ccC----CCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchh
Confidence 3445554433210 0 111 135567777777766554 455443211 111
Q ss_pred cceeeEeccccCCCeeeEEEEeecCCeEEE-EeCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCe
Q 036387 250 ITEEFEEVPVQSRGFGILDVGYRSQDEAWA-AGGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDG 327 (334)
Q Consensus 250 ~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~-~G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G 327 (334)
+. ... .......+.++.|.+++..++ ++.+|.| +.....++.=..+.. ....+.++.+.++++++++|.+|
T Consensus 193 ~~--~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~d~ 265 (372)
T 1k8k_C 193 EL--MFE--SSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS---ETLPLLAVTFITESSLVAAGHDC 265 (372)
T ss_dssp CE--EEE--CCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC---SSCCEEEEEEEETTEEEEEETTS
T ss_pred hh--eEe--cCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc---CCCCeEEEEEecCCCEEEEEeCC
Confidence 10 111 111122577888876664444 4556755 223333432222222 23578999999999999999888
Q ss_pred eEEEE
Q 036387 328 VLLQY 332 (334)
Q Consensus 328 ~il~s 332 (334)
.|..+
T Consensus 266 ~i~i~ 270 (372)
T 1k8k_C 266 FPVLF 270 (372)
T ss_dssp SCEEE
T ss_pred eEEEE
Confidence 76543
No 63
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.06 E-value=1.1 Score=43.04 Aligned_cols=185 Identities=11% Similarity=0.145 Sum_probs=95.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEEcCCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHTSDAG 192 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S~DgG 192 (334)
..+.+|+|.| |.+.+..++.++.|..=.=.|+.-+...... ..+.+|.|.+ +..++ ++..+.|..-+-.+
T Consensus 386 ~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~-------~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~ 457 (577)
T 2ymu_A 386 SSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQTLTGHS-------SSVWGVAFSPDDQTIASASDDKTVKLWNRNG 457 (577)
T ss_dssp SCEEEEEECT-TSSCEEEEETTSEEEEECTTCCEEEEEECCS-------SCEEEEEECTTSSEEEEEETTSEEEEEETTS
T ss_pred CCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCEEEEecCCC-------CCeEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 5688999987 4555555566676543221222111111111 1467888875 44444 44555443322122
Q ss_pred CCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEE
Q 036387 193 ESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 193 ~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
+.-..+. .|. ..+..+.|.+++.+++++ .++.|. +..+ |+. ...+. .....+.+++
T Consensus 458 ~~~~~~~-------------~~~----~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~--~~~~~--~h~~~v~~l~ 515 (577)
T 2ymu_A 458 QLLQTLT-------------GHS----SSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQL--LQTLT--GHSSSVRGVA 515 (577)
T ss_dssp CEEEEEE-------------CCS----SCEEEEEECTTSCEEEEEETTSEEEEEETT-SCE--EEEEE--CCSSCEEEEE
T ss_pred CEEEEEc-------------CCC----CCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCE--EEEEe--CCCCCEEEEE
Confidence 2222211 111 135567888888876654 455543 2333 221 12211 1123578899
Q ss_pred eecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEE-EEeCCeeEEEEc
Q 036387 271 YRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGF-VLGNDGVLLQYL 333 (334)
Q Consensus 271 ~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~-a~G~~G~il~s~ 333 (334)
|.+++..+++ +.+|.|.. ..+ |+--+.+.. -...+.+++|.++++.+ .++.+|.|..++
T Consensus 516 ~s~dg~~l~s~~~dg~v~lwd~~-~~~~~~~~~---h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 516 FSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG---HSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTT-SCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EcCCCCEEEEEECcCEEEEEeCC-CCEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9877765554 55676633 233 333333322 23679999999877654 467889887653
No 64
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=96.05 E-value=0.69 Score=40.58 Aligned_cols=206 Identities=10% Similarity=0.037 Sum_probs=102.2
Q ss_pred cceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC-CeEEEEcC-CCcCeEeCcCCCCcccCcceeEEEE
Q 036387 92 EQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR-QTLLETKD-GGKTWAPRSIPSAEEEDFNYRFNSI 169 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~-g~i~~S~D-gG~TW~~~~~p~~~~~~~~~~~~~I 169 (334)
+.|++=.-.+. .+....+. ....+|++.++ ..+|++... +.|++=.- .|+ .+....... ......++.|
T Consensus 50 ~~i~~~~~~~~-~~~~~~~~---~~~~~l~~~~d--g~l~v~~~~~~~i~~~d~~~g~-~~~~~~~~~--~~~~~~~~~i 120 (296)
T 3e5z_A 50 NRTWAWSDDGQ-LSPEMHPS---HHQNGHCLNKQ--GHLIACSHGLRRLERQREPGGE-WESIADSFE--GKKLNSPNDV 120 (296)
T ss_dssp TEEEEEETTSC-EEEEESSC---SSEEEEEECTT--CCEEEEETTTTEEEEECSTTCC-EEEEECEET--TEECCCCCCE
T ss_pred CEEEEEECCCC-eEEEECCC---CCcceeeECCC--CcEEEEecCCCeEEEEcCCCCc-EEEEeeccC--CCCCCCCCCE
Confidence 34554333333 44443332 35778999763 457776543 45554332 343 443321100 0000124567
Q ss_pred EEeC-CeEEEE----Ec--------------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec
Q 036387 170 SFKG-KEGWIV----GK--------------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD 230 (334)
Q Consensus 170 ~~~~-~~~~~v----G~--------------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~ 230 (334)
.+++ +++|+. |. .+.|++-+-.| ..+.+.... . ....+.+.++
T Consensus 121 ~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g-~~~~~~~~~--~---------------~~~gi~~s~d 182 (296)
T 3e5z_A 121 CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDG-TLSAPIRDR--V---------------KPNGLAFLPS 182 (296)
T ss_dssp EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTS-CEEEEECCC--S---------------SEEEEEECTT
T ss_pred EECCCCCEEEECCccccccccccccccccCCCcEEEEECCCC-CEEEeecCC--C---------------CCccEEECCC
Confidence 7775 677775 32 34677655443 344433210 0 1123566778
Q ss_pred CCEEEEEc-CCeEEEec-C-CCcce-eeEeccccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCcc
Q 036387 231 GGLWLLVR-GGGLFLSK-G-TGITE-EFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIA 306 (334)
Q Consensus 231 g~~~~~~~-~g~i~~S~-D-~G~tW-~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~ 306 (334)
+.++++.. .+.|++-. + .|. . .-..+- ........++++.+++.+|++. .+.|++-.-.|+.-..+..+.
T Consensus 183 g~~lv~~~~~~~i~~~~~~~~g~-~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~g~~~~~~~~~~--- 256 (296)
T 3e5z_A 183 GNLLVSDTGDNATHRYCLNARGE-TEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPDGDELGRVLTPQ--- 256 (296)
T ss_dssp SCEEEEETTTTEEEEEEECSSSC-EEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTTSCEEEEEECSS---
T ss_pred CCEEEEeCCCCeEEEEEECCCCc-CcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CCeEEEECCCCCEEEEEECCC---
Confidence 87664443 34555422 2 332 1 001111 1111123456777788899988 555654444477666665531
Q ss_pred cceeEEEEe-eC-CeEEEEeCCeeEEEE
Q 036387 307 ANLYSVKFI-NE-KKGFVLGNDGVLLQY 332 (334)
Q Consensus 307 ~~l~~i~~~-~~-~~~~a~G~~G~il~s 332 (334)
. ..+++|. ++ +++|+++.+| +++.
T Consensus 257 ~-~~~~~f~~~d~~~L~v~t~~~-l~~~ 282 (296)
T 3e5z_A 257 T-TSNLCFGGPEGRTLYMTVSTE-FWSI 282 (296)
T ss_dssp C-CCEEEEESTTSCEEEEEETTE-EEEE
T ss_pred C-ceeEEEECCCCCEEEEEcCCe-EEEE
Confidence 2 7788884 34 4688888766 4443
No 65
>3h6j_A Neuraminidase, sialidase; six-bladed beta-propeller, cell WALL, glycosidase, hydrolase, peptidoglycan-anchor, secreted; 1.60A {Pseudomonas aeruginosa} PDB: 2w38_A
Probab=96.00 E-value=0.7 Score=40.18 Aligned_cols=158 Identities=14% Similarity=0.144 Sum_probs=80.8
Q ss_pred EcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEe--C-CeEEEEE---cC--CEEEEEcCCCCCeEEeecCCCCC
Q 036387 134 GTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFK--G-KEGWIVG---KP--AILLHTSDAGESWERIPLSSQLP 205 (334)
Q Consensus 134 G~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~--~-~~~~~vG---~~--g~i~~S~DgG~TW~~~~~~~~l~ 205 (334)
|++|.+..|+=.|.-|.....-..... ..|++++-. + .++.++. +. -.+|.|+|.|.||...-.- ..
T Consensus 48 gsdgrvvfskleggiwsaptivaqagg---qdfrdvaggtmpsgrivaastvyetgevkvyvsddsgvtwvhkftl--ar 122 (438)
T 3h6j_A 48 GSDGRVVFSKLEGGIWSAPTIVAQAGG---QDFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVHKFTL--AR 122 (438)
T ss_dssp TSCCEEEEEEEETTEECCCEEEECCTT---CCEEEEEEEECTTSCEEEEEEETTTTEEEEEEESSTTSSCEEEEEE--CC
T ss_pred CCCceEEEEeccCccccCcchhhhhcC---cchhhhcCCcCCCccEEEEEEEEecccEEEEEecCCCcEEEEEEEe--ec
Confidence 457877777766777975432111111 246677643 3 5566543 22 3789999999999875432 12
Q ss_pred CCcccccccCccccceEeeeeEeecCCEEEEEcC---CeEEEecCCCcceeeEe-ccccCCCeeeEEEEeecCCeEEEE-
Q 036387 206 GDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG---GGLFLSKGTGITEEFEE-VPVQSRGFGILDVGYRSQDEAWAA- 280 (334)
Q Consensus 206 g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~---g~i~~S~D~G~tW~w~~-~~~~~~~~~~~~v~~~~~~~~~~~- 280 (334)
|...|-..|.... .+-..-+. -+|+++.- -.++.|.|+|+||---. +-.....+.-..--...++.++++
T Consensus 123 ggadynfahgksf--qvgaryvi---plyaatgvnyelkwlessdggetwgegstiysgntpynetsylpvgdgvilava 197 (438)
T 3h6j_A 123 GGADYNFAHGKSF--QVGARYVI---PLYAATGVNYELKWLESSDGGETWGEGSTIYSGNTPYNETSYLPVGDGVILAVA 197 (438)
T ss_dssp TTSSEEEECSBCE--EETTEEEE---EEEEEETTEEEEEEEEESSSSSSCEEEEEEEEESSCEEEEEEEEEETTEEEEEE
T ss_pred CCcccccccCcee--eecceEEE---EeeeecCcceEEEEEecCCCCccccCCceeecCCCCCCccceeecCCcEEEEEE
Confidence 2222211222110 00000000 14444432 24688999999873211 111111122222222336666664
Q ss_pred ----eCCCcE--EEEcCCCcCcEEccc
Q 036387 281 ----GGSGVL--LKTTNGGKTWIREKA 301 (334)
Q Consensus 281 ----G~~G~i--~~S~DgG~tW~~~~~ 301 (334)
|..|.+ |.|-|+|-+|.....
T Consensus 198 rvgsgaggalrqfislddggtwtdqgn 224 (438)
T 3h6j_A 198 RVGSGAGGALRQFISLDDGGTWTDQGN 224 (438)
T ss_dssp EETTSTTSCEEEEEESSTTSSCEEEEE
T ss_pred eecCCcchhhheeEEecCCCceecCCc
Confidence 223433 789999999998754
No 66
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.78 E-value=0.91 Score=39.78 Aligned_cols=200 Identities=13% Similarity=0.096 Sum_probs=104.4
Q ss_pred CCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeE
Q 036387 100 ALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEG 176 (334)
Q Consensus 100 gG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~ 176 (334)
.+...+.+.... ....++++.| +.+.+|+++. .+.|++ ..+++ .+....+.. ...+|.+++ +++
T Consensus 16 ~~~~~~~l~~~~---~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~-------~~~~l~~~~dg~l 82 (296)
T 3e5z_A 16 AGAEARRLADGF---TWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSH-------HQNGHCLNKQGHL 82 (296)
T ss_dssp TTCCCEEEECCC---SSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCS-------SEEEEEECTTCCE
T ss_pred CCCcEEEEecCC---ccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCC-------CcceeeECCCCcE
Confidence 355566655322 3456788987 4455666664 455654 34444 554433321 356788874 677
Q ss_pred EEEEcC-CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-----------------
Q 036387 177 WIVGKP-AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR----------------- 238 (334)
Q Consensus 177 ~~vG~~-g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~----------------- 238 (334)
|++... +.|++-+-.....+.+.... .+. .+ ..+..+.+.++|.+|++..
T Consensus 83 ~v~~~~~~~i~~~d~~~g~~~~~~~~~--~~~-~~---------~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~ 150 (296)
T 3e5z_A 83 IACSHGLRRLERQREPGGEWESIADSF--EGK-KL---------NSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMEL 150 (296)
T ss_dssp EEEETTTTEEEEECSTTCCEEEEECEE--TTE-EC---------CCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCS
T ss_pred EEEecCCCeEEEEcCCCCcEEEEeecc--CCC-CC---------CCCCCEEECCCCCEEEECCccccccccccccccccC
Confidence 777643 56666543222355543210 000 00 0123466678889998631
Q ss_pred -CCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEEE-cC-CCcCc---EEcccCCCcccceeE
Q 036387 239 -GGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLKT-TN-GGKTW---IREKAADNIAANLYS 311 (334)
Q Consensus 239 -~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S-~D-gG~tW---~~~~~~~~~~~~l~~ 311 (334)
.+.|++-...|+ ...+... .....++++.+++..+++.. .+.|++- .+ .|+ . ..+-. .......+
T Consensus 151 ~~~~l~~~~~~g~---~~~~~~~--~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~-~~~~~~~~~--~~~~~p~~ 222 (296)
T 3e5z_A 151 PGRWVFRLAPDGT---LSAPIRD--RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE-TEYQGVHFT--VEPGKTDG 222 (296)
T ss_dssp SSCEEEEECTTSC---EEEEECC--CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC-EEEEEEEEC--CSSSCCCS
T ss_pred CCcEEEEECCCCC---EEEeecC--CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc-CcCCCeEee--CCCCCCCe
Confidence 347776654454 2322111 11345777777776655443 3555432 22 232 3 11111 12234567
Q ss_pred EEEeeCCeEEEEeCCeeEEEEc
Q 036387 312 VKFINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 312 i~~~~~~~~~a~G~~G~il~s~ 333 (334)
|++.+++++|++. ++.|.+++
T Consensus 223 i~~d~~G~l~v~~-~~~v~~~~ 243 (296)
T 3e5z_A 223 LRVDAGGLIWASA-GDGVHVLT 243 (296)
T ss_dssp EEEBTTSCEEEEE-TTEEEEEC
T ss_pred EEECCCCCEEEEc-CCeEEEEC
Confidence 8888889999988 55566553
No 67
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.52 E-value=0.81 Score=46.57 Aligned_cols=195 Identities=12% Similarity=0.195 Sum_probs=97.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeCcCCCCcccCcceeEEEEEEe-C--CeEEE-EEcCCEEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPRSIPSAEEEDFNYRFNSISFK-G--KEGWI-VGKPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~-~--~~~~~-vG~~g~i~~S 188 (334)
..+++++|.| +.+.++.++.+|.| |... +.+++.+..-..+. ..+.+|.|. + ...++ ++..|.|..-
T Consensus 10 ~~V~~l~~s~-dg~~latg~~dg~I~vwd~~--~~~~~~~~~l~~h~----~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 10 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVE--GETHKLIDTLTGHE----GPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp CCEEEECCCS-SSCCEEEEETTTEEEEEEEE--TTEEEEEEEECCCS----SCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred ceeEEEEECC-CCCeEEEEECCCcEEEEecC--CCCCccceeccCCc----CceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 5789999987 44555555667753 4333 23454432111111 147888885 3 34444 4455533332
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCe
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGF 264 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~ 264 (334)
+=....|..+... . .|. ..+..+.+.++ +..++++ .++.|.. ....+... ..........
T Consensus 83 d~~~~~~~~~~~~---~-------~h~----~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~--~~~~~~~~~~ 146 (753)
T 3jro_A 83 KEENGRWSQIAVH---A-------VHS----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAI 146 (753)
T ss_dssp EEETTEEEEEEEE---C-------CCS----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC--CCEEEECCSS
T ss_pred ECCCCcccccccc---c-------CCC----CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc--ceeEeecCCC
Confidence 2112234444321 1 011 13566777777 6655544 4555432 22222110 1111111122
Q ss_pred eeEEEEeec--------------CCeEEEEeCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeC---CeEEE-Ee
Q 036387 265 GILDVGYRS--------------QDEAWAAGGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINE---KKGFV-LG 324 (334)
Q Consensus 265 ~~~~v~~~~--------------~~~~~~~G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~---~~~~a-~G 324 (334)
.+..+.|.+ +..++.++.+|.| |....+...++....-..-...+.+++|.++ +..++ ++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 567787765 2344455567754 4444555556655432122467999999887 66555 46
Q ss_pred CCeeEEEE
Q 036387 325 NDGVLLQY 332 (334)
Q Consensus 325 ~~G~il~s 332 (334)
.+|.|..+
T Consensus 227 ~Dg~I~iw 234 (753)
T 3jro_A 227 QDRTCIIW 234 (753)
T ss_dssp SSSCEEEE
T ss_pred cCCEEEEe
Confidence 78876544
No 68
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.45 E-value=1.3 Score=39.45 Aligned_cols=196 Identities=9% Similarity=-0.011 Sum_probs=92.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCE--EEEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAI--LLHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~--i~~S~ 189 (334)
..+.+++|.| |.+.+++.+.++.|.. ..+.++ |+.+..-..+ ...+.+|.+.+ +..++ .+..+. ++...
T Consensus 9 ~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~-~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 9 EPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNK-WVQVHELKEH----NGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCCCEEEECT-TSSEEEEECSSSEEEEEEEETTE-EEEEEEEECC----SSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCc-EEeeeeecCC----CCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 5688999987 4444444446665322 333332 3332210011 11477888885 44444 444553 33332
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeE
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGIL 267 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~ 267 (334)
. + .+...... . .+ ...+..+.+.+++..++++ .++.+. +..+.+..|.-...........+.
T Consensus 83 ~-~-~~~~~~~~---~-------~~----~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~ 146 (372)
T 1k8k_C 83 G-R-TWKPTLVI---L-------RI----NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 146 (372)
T ss_dssp T-T-EEEEEEEC---C-------CC----SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEE
T ss_pred C-C-eeeeeEEe---e-------cC----CCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCee
Confidence 2 2 23322211 0 01 1135567777777765554 455542 223333322111111111123578
Q ss_pred EEEeecCCeEEEE-eCCCcEEEEc-C--------CCc-------CcEEcccCCCcccceeEEEEeeCCe-EEEEeCCeeE
Q 036387 268 DVGYRSQDEAWAA-GGSGVLLKTT-N--------GGK-------TWIREKAADNIAANLYSVKFINEKK-GFVLGNDGVL 329 (334)
Q Consensus 268 ~v~~~~~~~~~~~-G~~G~i~~S~-D--------gG~-------tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~~G~i 329 (334)
++.|.+++..+++ +.+|.+..-. . ... +-+.+..-......+.++.+.+++. ++.++.+|.|
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 226 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTV 226 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEE
Confidence 8888876665555 4567653221 0 000 1112211111235688999987665 4555678876
Q ss_pred EEE
Q 036387 330 LQY 332 (334)
Q Consensus 330 l~s 332 (334)
..+
T Consensus 227 ~i~ 229 (372)
T 1k8k_C 227 CLA 229 (372)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.26 E-value=1.7 Score=39.66 Aligned_cols=65 Identities=9% Similarity=-0.005 Sum_probs=41.3
Q ss_pred eeeEEEEeecCCeEEEEe-CCCcE-EEEcCCCcCcEEcccC-CCcccceeEEEEeeCCeEEEEe-CCeeEEE
Q 036387 264 FGILDVGYRSQDEAWAAG-GSGVL-LKTTNGGKTWIREKAA-DNIAANLYSVKFINEKKGFVLG-NDGVLLQ 331 (334)
Q Consensus 264 ~~~~~v~~~~~~~~~~~G-~~G~i-~~S~DgG~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a~G-~~G~il~ 331 (334)
..+.+++|.+++..+++| .++.| +.... +.+.+... ..=...+++|+|.++++.+|.| .+|.|.-
T Consensus 270 ~~V~~~~~Spdg~~lasgs~D~~V~iwd~~---~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLASNDNSIALVKLK---DLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred CCeEeEEECCCCCceEEEcCCCEEEEEECC---CCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 357889998888877765 46655 22333 33443321 1113579999999998888764 7777653
No 70
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.05 E-value=1.8 Score=38.71 Aligned_cols=195 Identities=13% Similarity=0.161 Sum_probs=95.2
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEEEEEcC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAILLHTSD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i~~S~D 190 (334)
..+.+++|.| +.+.+..++.++.| +...+.+..++.+..-..+. ..+.+|.|.+ ...++. +..+.|..-+.
T Consensus 108 ~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 108 NEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS----QDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp -CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS----SCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred CcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC----CceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 5788999987 45555555666754 44435566665443111111 1478888885 444444 44554433222
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEE-EEcCCeE--EEecC----CCcceeeEecc-cc
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWL-LVRGGGL--FLSKG----TGITEEFEEVP-VQ 260 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~-~~~~g~i--~~S~D----~G~tW~w~~~~-~~ 260 (334)
....|+.+.. +.+ |. ..+..+.|.++ +..++ .+.++.| |.... .-.. |.... ++
T Consensus 183 ~~~~~~~~~~---~~~-------h~----~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~--~~~~~~~~ 246 (330)
T 2hes_X 183 YDDDWECVAV---LNG-------HE----GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQE--WVCEAILP 246 (330)
T ss_dssp ETTEEEEEEE---ECC-------CS----SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEE--EEEEEECC
T ss_pred CCCCeeEEEE---ccC-------CC----CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccce--eEEeeecc
Confidence 2234554432 111 11 12445666665 33333 3445543 32211 1111 22221 11
Q ss_pred C-CCeeeEEEEeecCCeEEEEeCCCcE--EEEcCCCcCcEEcccC-CCccc-ceeEEEEee--CCeEE-EEeCCeeEEEE
Q 036387 261 S-RGFGILDVGYRSQDEAWAAGGSGVL--LKTTNGGKTWIREKAA-DNIAA-NLYSVKFIN--EKKGF-VLGNDGVLLQY 332 (334)
Q Consensus 261 ~-~~~~~~~v~~~~~~~~~~~G~~G~i--~~S~DgG~tW~~~~~~-~~~~~-~l~~i~~~~--~~~~~-a~G~~G~il~s 332 (334)
. ....+.+++|.+++.+..++.+|.| |...+ | .|+.+... ..-.. .+..++|.+ +++.+ .++.+|.|.-+
T Consensus 247 ~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~-~-~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 247 DVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVD-G-EWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp SCCSSCEEEEEECTTSCEEEEETTSCEEEEEEET-T-EEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEE
T ss_pred cccccceEEEEEcCCCEEEEEeCCCEEEEEEcCC-C-ceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEE
Confidence 1 1235788988766666666778865 43332 3 36544321 01122 688899876 45544 45788887644
No 71
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.73 E-value=2.1 Score=37.90 Aligned_cols=204 Identities=12% Similarity=0.117 Sum_probs=104.9
Q ss_pred CCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE
Q 036387 101 LSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI 178 (334)
Q Consensus 101 G~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~ 178 (334)
++.|..+.... ....++++.++ +.+|+++. .+.|++=.-.+...+....... ..+.+|.+++ +++|+
T Consensus 34 ~~~~~~~~~~~---~~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~i~~~~dg~l~v 102 (333)
T 2dg1_A 34 AEPWLEISKKG---LQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKRPFVSHK------ANPAAIKIHKDGRLFV 102 (333)
T ss_dssp CEEEEEEESSC---CCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECSS------SSEEEEEECTTSCEEE
T ss_pred cceeEEEeccC---ccccCcEECCC--CCEEEEECCCCEEEEEeCCCCcEEEEeeCCC------CCcceEEECCCCcEEE
Confidence 44566654322 34578888763 45777764 4556554323334544321111 1467788874 67787
Q ss_pred EEcC-----CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC-------CeEEEec
Q 036387 179 VGKP-----AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG-------GGLFLSK 246 (334)
Q Consensus 179 vG~~-----g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~-------g~i~~S~ 246 (334)
+... +.|++-+-.+...+.+.... .++ ..+..+.+.+++.+|+.+.. +.|++-.
T Consensus 103 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~-------------~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~ 168 (333)
T 2dg1_A 103 CYLGDFKSTGGIFAATENGDNLQDIIEDL-STA-------------YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS 168 (333)
T ss_dssp EECTTSSSCCEEEEECTTSCSCEEEECSS-SSC-------------CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC
T ss_pred EeCCCCCCCceEEEEeCCCCEEEEEEccC-ccC-------------CcccceEECCCCCEEEEeccccccCCCceEEEEe
Confidence 7643 36666543344343222110 011 12345667788899988753 5677655
Q ss_pred CCCcceeeEeccccCCCeeeEEEEeecCC-eEEEEeC-CCcEEEE-cC-CCcCcEEcc----cCCCcccceeEEEEeeCC
Q 036387 247 GTGITEEFEEVPVQSRGFGILDVGYRSQD-EAWAAGG-SGVLLKT-TN-GGKTWIREK----AADNIAANLYSVKFINEK 318 (334)
Q Consensus 247 D~G~tW~w~~~~~~~~~~~~~~v~~~~~~-~~~~~G~-~G~i~~S-~D-gG~tW~~~~----~~~~~~~~l~~i~~~~~~ 318 (334)
..+.. ...+.... ....++++.+++ .+|++.. .+.|++- .+ .|+..+.+. ...........|.+.+++
T Consensus 169 ~~~~~--~~~~~~~~--~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G 244 (333)
T 2dg1_A 169 PDFRT--VTPIIQNI--SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD 244 (333)
T ss_dssp TTSCC--EEEEEEEE--SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC
T ss_pred CCCCE--EEEeecCC--CcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC
Confidence 33321 22221110 124567776665 4777643 3455432 22 354443221 000011356678888888
Q ss_pred eEEEEe-CCeeEEEEc
Q 036387 319 KGFVLG-NDGVLLQYL 333 (334)
Q Consensus 319 ~~~a~G-~~G~il~s~ 333 (334)
++|++. .++.|.+.+
T Consensus 245 ~l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 245 NLYVAMYGQGRVLVFN 260 (333)
T ss_dssp CEEEEEETTTEEEEEC
T ss_pred CEEEEEcCCCEEEEEC
Confidence 999876 345666553
No 72
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=94.56 E-value=2.6 Score=38.24 Aligned_cols=107 Identities=13% Similarity=0.041 Sum_probs=54.0
Q ss_pred eEeeeeEeecCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEEEEeecCC--eEEEEeCCCcEEEE-cCCCcC
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILDVGYRSQD--EAWAAGGSGVLLKT-TNGGKT 295 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~--~~~~~G~~G~i~~S-~DgG~t 295 (334)
.+..+.|.+++..++.+ .++.|.. ....++. ...+ ......+.+++|.+++ .+..++.+|.|..- ...++.
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~--~~~~--~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV--LKSY--NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTTEE--EEEE--CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE--EEEE--cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce
Confidence 46677888888766654 4555432 2223321 1111 1112257788886544 33445667776332 122222
Q ss_pred cEEcccCCCcccceeEEEEeeC-CeEEEE-eCCeeEEEE
Q 036387 296 WIREKAADNIAANLYSVKFINE-KKGFVL-GNDGVLLQY 332 (334)
Q Consensus 296 W~~~~~~~~~~~~l~~i~~~~~-~~~~a~-G~~G~il~s 332 (334)
=..+... .....+.+++|.++ +.++++ +.+|.|..+
T Consensus 217 ~~~~~~~-~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 217 ATRIDFC-ASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp BCBCCCT-TCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred eeeeeec-cccccccchhhhhcccceEEEeecccceeEE
Confidence 1112111 12346789999864 456665 467766543
No 73
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=94.43 E-value=2.5 Score=37.38 Aligned_cols=185 Identities=10% Similarity=0.034 Sum_probs=91.5
Q ss_pred eeEEEEEecCCCCEEEEEEcC-CeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE----Ec--------
Q 036387 116 VLLDIAFVPDDLNHGFLLGTR-QTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV----GK-------- 181 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~~-g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v----G~-------- 181 (334)
...++++.++ .++|++... +.|++-.-.|+ .+.+..... .......++|.+++ +++|+. |.
T Consensus 87 ~~~gl~~d~d--G~l~v~~~~~~~v~~~~~~g~-~~~~~~~~~--~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 87 FTNGNAVDAQ--QRLVHCEHGRRAITRSDADGQ-AHLLVGRYA--GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp CEEEEEECTT--SCEEEEETTTTEEEEECTTSC-EEEEECEET--TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCC
T ss_pred ccceeeECCC--CCEEEEECCCCEEEEECCCCC-EEEEEeccC--CCccCCCCCEEECCCCCEEEeCcCCCccccccccc
Confidence 4677888763 557776543 45655443343 444321110 00001244667764 677774 22
Q ss_pred ------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEcC------CeEEEec-C
Q 036387 182 ------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVRG------GGLFLSK-G 247 (334)
Q Consensus 182 ------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~~------g~i~~S~-D 247 (334)
.+.||+-+-.+.+.+.+. .. . ....+.+++++. +|++... ..|++-. +
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~-~~--~---------------~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~ 223 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA-DL--D---------------HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWR 223 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE-EE--S---------------SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEE
T ss_pred cccccCCCeEEEEcCCCCcEEEEe-cC--C---------------CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEec
Confidence 245666543233455443 10 0 112356677776 6666543 4555422 2
Q ss_pred CCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeC-CeEEEEeCC
Q 036387 248 TGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINE-KKGFVLGND 326 (334)
Q Consensus 248 ~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~-~~~~a~G~~ 326 (334)
.+. ..-..+..........++.+..++.+|++...| |++-.-.|+.-..+..+ .....++|.++ +++|++..+
T Consensus 224 ~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~g-v~~~~~~g~~~~~~~~~----~~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 224 DGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSGTG-VCVFDSDGQLLGHIPTP----GTASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp TTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCSSE-EEEECTTSCEEEEEECS----SCCCEEEECTTSCEEEEEETT
T ss_pred CCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecCCc-EEEECCCCCEEEEEECC----CceeEEEEeCCCCEEEEEcCC
Confidence 211 111111100000012345566678888876555 54444456666666653 24677788644 578888887
Q ss_pred eeE
Q 036387 327 GVL 329 (334)
Q Consensus 327 G~i 329 (334)
|++
T Consensus 298 ~l~ 300 (305)
T 3dr2_A 298 CLW 300 (305)
T ss_dssp EEE
T ss_pred eEE
Confidence 643
No 74
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=94.37 E-value=3.8 Score=39.23 Aligned_cols=183 Identities=10% Similarity=0.147 Sum_probs=93.4
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEEEEEcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAILLHTSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i~~S~Dg 191 (334)
..+.+++|.| |.+.+...+.+|.+.. ..+ |+.-...... ...+++|.|.+ ++.++. +..+.|..-+=.
T Consensus 345 ~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~~-~~~~~~~~~~-------~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~ 415 (577)
T 2ymu_A 345 SSVWGVAFSP-DGQTIASASDDKTVKLWNRN-GQLLQTLTGH-------SSSVRGVAFSPDGQTIASASDDKTVKLWNRN 415 (577)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETT-CCEEEEEECC-------SSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEECC-CCCEEEEEeCCCEEEEEcCC-CCEEEEecCC-------CCCeEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 5688899987 4555554455665432 222 2222221111 12477888875 444444 455655443322
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
|+.-+.+.. | ...+..+.|.+++..++.+ .++.+.. ..+ ++. ...+. .....+.++
T Consensus 416 ~~~~~~~~~-------------~----~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~--~~~~~--~~~~~v~~~ 473 (577)
T 2ymu_A 416 GQLLQTLTG-------------H----SSSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQL--LQTLT--GHSSSVRGV 473 (577)
T ss_dssp CCEEEEEEC-------------C----SSCEEEEEECTTSSEEEEEETTSEEEEEETT-SCE--EEEEE--CCSSCEEEE
T ss_pred CCEEEEecC-------------C----CCCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCE--EEEEc--CCCCCEEEE
Confidence 222222111 1 1135567778888766544 4555432 232 221 12211 112357888
Q ss_pred EeecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 270 GYRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 270 ~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
+|.+++..+++ +.++.|.. ..+ |+-=+.+.. -...+.+|+|.++++.++ ++.+|.|.-+
T Consensus 474 ~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~---h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 474 AFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTG---HSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp EECTTSCEEEEEETTSEEEEEETT-SCEEEEEEC---CSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeC---CCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 99887776665 45666532 333 322222221 235789999998777655 5678876543
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.16 E-value=3.1 Score=37.51 Aligned_cols=195 Identities=13% Similarity=0.151 Sum_probs=91.4
Q ss_pred eeeEEEEEecCCCC-EEEEEEcCCe--EEEE----cCCCcCeEeC-----cCCCCcc---cCcceeEEEEEEeC-CeEEE
Q 036387 115 VVLLDIAFVPDDLN-HGFLLGTRQT--LLET----KDGGKTWAPR-----SIPSAEE---EDFNYRFNSISFKG-KEGWI 178 (334)
Q Consensus 115 ~~l~~I~~~p~d~~-~~~avG~~g~--i~~S----~DgG~TW~~~-----~~p~~~~---~~~~~~~~~I~~~~-~~~~~ 178 (334)
..+.+++|.|+ .. .++.++.+|. +|.. .++-.-|+.. ..+.... ......+.++.|.+ +..++
T Consensus 46 ~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 124 (425)
T 1r5m_A 46 DNIVSSTWNPL-DESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIV 124 (425)
T ss_dssp SCCSEEEECSS-CTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEE
T ss_pred CceEEEEECCC-CCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEE
Confidence 36788999884 44 4444455564 4444 3333223321 1111100 00012578888885 44444
Q ss_pred E-EcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEE-EecCCCcceeeE
Q 036387 179 V-GKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLF-LSKGTGITEEFE 255 (334)
Q Consensus 179 v-G~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~-~S~D~G~tW~w~ 255 (334)
+ +..+.|..-+..|+.-..+.. |. ..+..+.+.+++..+++ +.++.+. +....++. ..
T Consensus 125 ~~~~dg~i~i~~~~~~~~~~~~~-------------~~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~ 185 (425)
T 1r5m_A 125 TGVENGELRLWNKTGALLNVLNF-------------HR----APIVSVKWNKDGTHIISMDVENVTILWNVISGTV--MQ 185 (425)
T ss_dssp EEETTSCEEEEETTSCEEEEECC-------------CC----SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE--EE
T ss_pred EEeCCCeEEEEeCCCCeeeeccC-------------CC----ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE--EE
Confidence 4 455544433333332222221 10 13556677777765444 4455443 23333331 11
Q ss_pred eccccCC-------------CeeeEEEEeecCCeEEEEeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEE
Q 036387 256 EVPVQSR-------------GFGILDVGYRSQDEAWAAGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGF 321 (334)
Q Consensus 256 ~~~~~~~-------------~~~~~~v~~~~~~~~~~~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~ 321 (334)
....... ...+..+.+.+++.+++.+.+|.|+. ....++.-..+.. ....+..+.+.++++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeecc---CCCceEEEEECCCCCEE
Confidence 1111110 00155667777777666666776633 3333433333322 23578999998776555
Q ss_pred E-EeCCeeEEEE
Q 036387 322 V-LGNDGVLLQY 332 (334)
Q Consensus 322 a-~G~~G~il~s 332 (334)
+ ++.+|.|..+
T Consensus 263 ~~~~~d~~i~i~ 274 (425)
T 1r5m_A 263 LSASDDGTLRIW 274 (425)
T ss_dssp EEEETTSCEEEE
T ss_pred EEEcCCCEEEEE
Confidence 5 5568877654
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.02 E-value=2.7 Score=36.25 Aligned_cols=183 Identities=10% Similarity=-0.016 Sum_probs=97.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEe--C-CeEEEEEcCCEEEEEcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFK--G-KEGWIVGKPAILLHTSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~--~-~~~~~vG~~g~i~~S~Dg 191 (334)
..+.++.+. ++.++..+.+|.|..=. .++.=....... ..+..+.+. + +.++..+..+.|..-+ .
T Consensus 105 ~~i~~~~~~---~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~-------~~v~~~~~~~~~~~~l~~~~~d~~i~i~d-~ 172 (313)
T 3odt_A 105 GNVCSLSFQ---DGVVISGSWDKTAKVWK-EGSLVYNLQAHN-------ASVWDAKVVSFSENKFLTASADKTIKLWQ-N 172 (313)
T ss_dssp SCEEEEEEE---TTEEEEEETTSEEEEEE-TTEEEEEEECCS-------SCEEEEEEEETTTTEEEEEETTSCEEEEE-T
T ss_pred cCEEEEEec---CCEEEEEeCCCCEEEEc-CCcEEEecccCC-------CceeEEEEccCCCCEEEEEECCCCEEEEe-c
Confidence 567888884 45666666677654422 221111111111 135566654 3 4444445556554433 2
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEE-EecCCCcceeeEeccccCCCeeeEEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
++.-..+.. .+. ..+..+.+.+++.++..+.++.|. +....++. ....... ...+..+.
T Consensus 173 ~~~~~~~~~------------~~~----~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~~~--~~~i~~~~ 232 (313)
T 3odt_A 173 DKVIKTFSG------------IHN----DVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV--LRTYEGH--ESFVYCIK 232 (313)
T ss_dssp TEEEEEECS------------SCS----SCEEEEEEEETTEEEEEETTSEEEEEETTTCCE--EEEEECC--SSCEEEEE
T ss_pred CceEEEEec------------cCc----ccEEEEEEcCCCeEEEccCCCeEEEEECCchhh--hhhhhcC--CceEEEEE
Confidence 221111111 011 134567777777766666666653 23333331 1222111 12578888
Q ss_pred eecCCeEEEEeCCCcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 271 YRSQDEAWAAGGSGVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 271 ~~~~~~~~~~G~~G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
|.+++.+++++.+|.|..- ...++-=+.+.. ....+.++.+.+++++++++.+|.|..+
T Consensus 233 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~dg~i~iw 292 (313)
T 3odt_A 233 LLPNGDIVSCGEDRTVRIWSKENGSLKQVITL---PAISIWSVDCMSNGDIIVGSSDNLVRIF 292 (313)
T ss_dssp ECTTSCEEEEETTSEEEEECTTTCCEEEEEEC---SSSCEEEEEECTTSCEEEEETTSCEEEE
T ss_pred EecCCCEEEEecCCEEEEEECCCCceeEEEec---cCceEEEEEEccCCCEEEEeCCCcEEEE
Confidence 8877777777778876333 234432233322 2357999999998898889999987654
No 77
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.68 E-value=3.5 Score=36.47 Aligned_cols=201 Identities=14% Similarity=0.096 Sum_probs=100.6
Q ss_pred eEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC----------CeEEEEcCCCcCeEeCcCCCCcccCcc
Q 036387 94 PAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR----------QTLLETKDGGKTWAPRSIPSAEEEDFN 163 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~----------g~i~~S~DgG~TW~~~~~p~~~~~~~~ 163 (334)
+++=+-.-.+|+.+.....+ .....++.. .+.+|++|.. ..+++=+=...+|+++..... ...
T Consensus 41 ~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r~ 113 (308)
T 1zgk_A 41 LEAYNPSNGTWLRLADLQVP-RSGLAGCVV---GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSV---PRN 113 (308)
T ss_dssp EEEEETTTTEEEECCCCSSC-CBSCEEEEE---TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSS---CCB
T ss_pred EEEEcCCCCeEeECCCCCcc-cccceEEEE---CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCc---Ccc
Confidence 44434445689988532111 223344444 2678887643 124443334568998752111 111
Q ss_pred eeEEEEEEeCCeEEEEEc------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE
Q 036387 164 YRFNSISFKGKEGWIVGK------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV 237 (334)
Q Consensus 164 ~~~~~I~~~~~~~~~vG~------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~ 237 (334)
.. .+...++.+|++|. ...+++-+-...+|+.+... |.... .+ .+. .-++.+|+.+
T Consensus 114 -~~-~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r~---~~---------~~~-~~~~~iyv~G 175 (308)
T 1zgk_A 114 -RI-GVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPM---LTRRI---GV---------GVA-VLNRLLYAVG 175 (308)
T ss_dssp -TC-EEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCC---SSCCB---SC---------EEE-EETTEEEEEC
T ss_pred -cc-EEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCC---Ccccc---ce---------EEE-EECCEEEEEe
Confidence 11 22334778888753 12345555556789988632 21110 00 111 2366788876
Q ss_pred cC------CeEEEecCCCcceeeEeccc-cCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCC
Q 036387 238 RG------GGLFLSKGTGITEEFEEVPV-QSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADN 304 (334)
Q Consensus 238 ~~------g~i~~S~D~G~tW~w~~~~~-~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~ 304 (334)
.. ..+++-.-... +|+.++. +........+.+ ++.+|++|.. ..+++-.=..++|+.+... +
T Consensus 176 G~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p 250 (308)
T 1zgk_A 176 GFDGTNRLNSAECYYPERN--EWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM-K 250 (308)
T ss_dssp CBCSSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC-S
T ss_pred CCCCCCcCceEEEEeCCCC--eEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC-C
Confidence 32 22333332333 4566532 221112222222 6789998753 3355544456689998753 3
Q ss_pred cccceeEEEEeeCCeEEEEeC
Q 036387 305 IAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 305 ~~~~l~~i~~~~~~~~~a~G~ 325 (334)
....-.++... ++++|++|.
T Consensus 251 ~~r~~~~~~~~-~~~i~v~GG 270 (308)
T 1zgk_A 251 HRRSALGITVH-QGRIYVLGG 270 (308)
T ss_dssp SCCBSCEEEEE-TTEEEEECC
T ss_pred CCccceEEEEE-CCEEEEEcC
Confidence 33334444444 678999875
No 78
>3h6j_A Neuraminidase, sialidase; six-bladed beta-propeller, cell WALL, glycosidase, hydrolase, peptidoglycan-anchor, secreted; 1.60A {Pseudomonas aeruginosa} PDB: 2w38_A
Probab=93.46 E-value=1.1 Score=38.95 Aligned_cols=150 Identities=22% Similarity=0.257 Sum_probs=74.1
Q ss_pred cceEEecCCCCCcEEccc-CCCCCeeeEEEEEecCCCCEEEEEEc---CC--eEEEEcCCCcCeEeCcCCCCcccCccee
Q 036387 92 EQPAKSEEALSAWERVYI-PVDPGVVLLDIAFVPDDLNHGFLLGT---RQ--TLLETKDGGKTWAPRSIPSAEEEDFNYR 165 (334)
Q Consensus 92 g~i~~S~DgG~tW~~~~~-p~~~~~~l~~I~~~p~d~~~~~avG~---~g--~i~~S~DgG~TW~~~~~p~~~~~~~~~~ 165 (334)
+.+..|.=.|.-|..-.. ....+..+.+++--.--..+++++.. .| .+|.|+|.|.||.....-..... +|.
T Consensus 51 grvvfskleggiwsaptivaqaggqdfrdvaggtmpsgrivaastvyetgevkvyvsddsgvtwvhkftlargga--dyn 128 (438)
T 3h6j_A 51 GRVVFSKLEGGIWSAPTIVAQAGGQDFRDVAGGTMPSGRIVAASTVYETGEVKVYVSDDSGVTWVHKFTLARGGA--DYN 128 (438)
T ss_dssp CEEEEEEEETTEECCCEEEECCTTCCEEEEEEEECTTSCEEEEEEETTTTEEEEEEESSTTSSCEEEEEECCTTS--SEE
T ss_pred ceEEEEeccCccccCcchhhhhcCcchhhhcCCcCCCccEEEEEEEEecccEEEEEecCCCcEEEEEEEeecCCc--ccc
Confidence 445555555566652111 11123678887643212356666643 34 48999999999975542111111 122
Q ss_pred EE-EEEEe-CCe----EEEEEc---CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE
Q 036387 166 FN-SISFK-GKE----GWIVGK---PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL 236 (334)
Q Consensus 166 ~~-~I~~~-~~~----~~~vG~---~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~ 236 (334)
|. .-.|. ..+ +|++.. .-.++.|.|+|+||-+-..- ..|+..| + -...--..|+.++++
T Consensus 129 fahgksfqvgaryviplyaatgvnyelkwlessdggetwgegsti--ysgntpy----n------etsylpvgdgvilav 196 (438)
T 3h6j_A 129 FAHGKSFQVGARYVIPLYAATGVNYELKWLESSDGGETWGEGSTI--YSGNTPY----N------ETSYLPVGDGVILAV 196 (438)
T ss_dssp EECSBCEEETTEEEEEEEEEETTEEEEEEEEESSSSSSCEEEEEE--EEESSCE----E------EEEEEEEETTEEEEE
T ss_pred cccCceeeecceEEEEeeeecCcceEEEEEecCCCCccccCCcee--ecCCCCC----C------ccceeecCCcEEEEE
Confidence 21 00111 111 233321 23789999999999875432 1122111 0 001111345555554
Q ss_pred Ec-----CC--eEEEecCCCcceeeE
Q 036387 237 VR-----GG--GLFLSKGTGITEEFE 255 (334)
Q Consensus 237 ~~-----~g--~i~~S~D~G~tW~w~ 255 (334)
.. .| .-+.|.|+|-||+-+
T Consensus 197 arvgsgaggalrqfislddggtwtdq 222 (438)
T 3h6j_A 197 ARVGSGAGGALRQFISLDDGGTWTDQ 222 (438)
T ss_dssp EEETTSTTSCEEEEEESSTTSSCEEE
T ss_pred EeecCCcchhhheeEEecCCCceecC
Confidence 31 22 347788988888533
No 79
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.31 E-value=3.8 Score=35.65 Aligned_cols=192 Identities=13% Similarity=0.168 Sum_probs=95.6
Q ss_pred eEEEEEecCCCCEEEEE--------EcCCeEEEEc-CCCcCeEeCcCCCCcccCcceeEEEEEEe-C-CeEEEEEcCCEE
Q 036387 117 LLDIAFVPDDLNHGFLL--------GTRQTLLETK-DGGKTWAPRSIPSAEEEDFNYRFNSISFK-G-KEGWIVGKPAIL 185 (334)
Q Consensus 117 l~~I~~~p~d~~~~~av--------G~~g~i~~S~-DgG~TW~~~~~p~~~~~~~~~~~~~I~~~-~-~~~~~vG~~g~i 185 (334)
..++++.++ +++|++ ...+.|++=. +.|+ ++....+.... .......|.++ + +++|++.....|
T Consensus 20 ~~~~~~~~~--g~l~~~~~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~--~~~~~~~i~~~~~~g~l~v~~~~~~l 94 (314)
T 1pjx_A 20 AEGPVFDKN--GDFYIVAPEVEVNGKPAGEILRIDLKTGK-KTVICKPEVNG--YGGIPAGCQCDRDANQLFVADMRLGL 94 (314)
T ss_dssp CEEEEECTT--SCEEEEETTCEETTEECCEEEEECTTTCC-EEEEECCEETT--EECCEEEEEECSSSSEEEEEETTTEE
T ss_pred ccCceECCC--CCEEEEEeccccCCCCCCEEEEEeCCCCc-EEEEEecccCC--CCCCCceEEEecCCCcEEEEECCCCE
Confidence 467888642 567776 3355665543 3443 54433211000 01135677776 4 578888755455
Q ss_pred EEEcCCCCCeEEe-ecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC----------------CeEEEecCC
Q 036387 186 LHTSDAGESWERI-PLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG----------------GGLFLSKGT 248 (334)
Q Consensus 186 ~~S~DgG~TW~~~-~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~----------------g~i~~S~D~ 248 (334)
++-+-.|+ .+.+ .... .+. .. ..+..+.+.+++.+|+++.. +.|++-...
T Consensus 95 ~~~d~~g~-~~~~~~~~~--~~~-~~---------~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 95 LVVQTDGT-FEEIAKKDS--EGR-RM---------QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEETTSC-EEECCSBCT--TSC-BC---------BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred EEEeCCCC-EEEEEeccC--CCc-cc---------cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 55432243 4444 2110 010 00 12334666778899988753 467766533
Q ss_pred CcceeeEeccccCCCeeeEEEEee----cCC-eEEEEeC-CCcEEEEc-C-CCc-----CcEEcccCCCcccceeEEEEe
Q 036387 249 GITEEFEEVPVQSRGFGILDVGYR----SQD-EAWAAGG-SGVLLKTT-N-GGK-----TWIREKAADNIAANLYSVKFI 315 (334)
Q Consensus 249 G~tW~w~~~~~~~~~~~~~~v~~~----~~~-~~~~~G~-~G~i~~S~-D-gG~-----tW~~~~~~~~~~~~l~~i~~~ 315 (334)
|+ ........ ....++++. +++ .+|++.. .+.|++-. + .|+ .+..+.. ........|++.
T Consensus 162 g~---~~~~~~~~--~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~--~~~~~p~~i~~d 234 (314)
T 1pjx_A 162 GQ---MIQVDTAF--QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG--THEGGADGMDFD 234 (314)
T ss_dssp SC---EEEEEEEE--SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC--CSSCEEEEEEEB
T ss_pred CC---EEEeccCC--CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC--CCCCCCCceEEC
Confidence 53 22221110 023455665 555 5677643 45554432 2 232 2222221 100346778888
Q ss_pred eCCeEEEEe-CCeeEEEEc
Q 036387 316 NEKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 316 ~~~~~~a~G-~~G~il~s~ 333 (334)
+++++|++. .++.|.+.+
T Consensus 235 ~~G~l~v~~~~~~~i~~~d 253 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFG 253 (314)
T ss_dssp TTCCEEEEEETTTEEEEEC
T ss_pred CCCCEEEEEcCCCEEEEEc
Confidence 889999885 455666654
No 80
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.18 E-value=5 Score=36.68 Aligned_cols=185 Identities=12% Similarity=0.094 Sum_probs=95.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcCCEEEEEcC--C
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTSD--A 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~g~i~~S~D--g 191 (334)
..+.+|+|.| +.+.+++++.+|.|.. ..+.++.-..... . ...+.++.++++.++..+..+.|..-+= .
T Consensus 135 ~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~------~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~ 206 (401)
T 4aez_A 135 TYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKLRTMAG-H------QARVGCLSWNRHVLSSGSRSGAIHHHDVRIA 206 (401)
T ss_dssp CCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECC-C------SSCEEEEEEETTEEEEEETTSEEEEEETTSS
T ss_pred CCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEEEEecC-C------CCceEEEEECCCEEEEEcCCCCEEEEecccC
Confidence 6799999987 4555555555665422 2333332222211 1 1146778886665666666665544321 1
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
+..-..+. .|. ..+..+.+.+++..++++ .++.|.. ....++. ..... .....+.++
T Consensus 207 ~~~~~~~~-------------~~~----~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--~~~~~--~~~~~v~~~ 265 (401)
T 4aez_A 207 NHQIGTLQ-------------GHS----SEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP--KFTKT--NHNAAVKAV 265 (401)
T ss_dssp SCEEEEEE-------------CCS----SCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE--EEEEC--CCSSCCCEE
T ss_pred cceeeEEc-------------CCC----CCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc--cEEec--CCcceEEEE
Confidence 11111111 111 135567777777766654 4454432 2222321 11111 111246678
Q ss_pred EeecC-CeEEEEeC---CCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE--e-CCeeEEEE
Q 036387 270 GYRSQ-DEAWAAGG---SGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL--G-NDGVLLQY 332 (334)
Q Consensus 270 ~~~~~-~~~~~~G~---~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~--G-~~G~il~s 332 (334)
.|.+. ..+++++. +|.| +...+.|+.-..+.. ...+.++.+.+++..+++ | .+|.|..+
T Consensus 266 ~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~ 332 (401)
T 4aez_A 266 AWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA----GSQVTSLIWSPHSKEIMSTHGFPDNNLSIW 332 (401)
T ss_dssp EECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC----SSCEEEEEECSSSSEEEEEECTTTCEEEEE
T ss_pred EECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC----CCcEEEEEECCCCCeEEEEeecCCCcEEEE
Confidence 88763 45666653 6655 333444544444433 357899999887777766 5 57776543
No 81
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=93.12 E-value=4.2 Score=35.70 Aligned_cols=187 Identities=8% Similarity=-0.078 Sum_probs=96.3
Q ss_pred EEEEEecCCCCEEEEEEc-CCeEEEEc-CCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEcCCEEEEEcCCCCC
Q 036387 118 LDIAFVPDDLNHGFLLGT-RQTLLETK-DGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGKPAILLHTSDAGES 194 (334)
Q Consensus 118 ~~I~~~p~d~~~~~avG~-~g~i~~S~-DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S~DgG~T 194 (334)
-+..+.+ +.+.+|++.. .+.|++=. ++++ -+....+. ...+|.+.+ +++|+.. ..+|++-+-....
T Consensus 16 Egp~w~~-~~~~l~~~d~~~~~i~~~d~~~~~-~~~~~~~~--------~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 16 ESPVWEE-VSNSLLFVDIPAKKVCRWDSFTKQ-VQRVTMDA--------PVSSVALRQSGGYVATI-GTKFCALNWKEQS 84 (297)
T ss_dssp EEEEEET-TTTEEEEEETTTTEEEEEETTTCC-EEEEECSS--------CEEEEEEBTTSSEEEEE-TTEEEEEETTTTE
T ss_pred cCCeEEC-CCCEEEEEECCCCEEEEEECCCCc-EEEEeCCC--------ceEEEEECCCCCEEEEE-CCeEEEEECCCCc
Confidence 3566665 3467777764 34555533 3333 23332222 356777875 5566554 4556655433445
Q ss_pred eEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc------------CCeEEEecCCCcceeeEeccccCC
Q 036387 195 WERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR------------GGGLFLSKGTGITEEFEEVPVQSR 262 (334)
Q Consensus 195 W~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~------------~g~i~~S~D~G~tW~w~~~~~~~~ 262 (334)
++.+.... .+.. ..++..+.+.++|.+|+.+. .+.||+-...|+. ..+....
T Consensus 85 ~~~~~~~~--~~~~----------~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~---~~~~~~~- 148 (297)
T 3g4e_A 85 AVVLATVD--NDKK----------NNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV---KKYFDQV- 148 (297)
T ss_dssp EEEEEECC--TTCS----------SEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE---EEEEEEE-
T ss_pred EEEEEecC--CCCC----------CCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE---EEEeecc-
Confidence 66654321 1110 11345567788899998762 2467776544541 2211110
Q ss_pred CeeeEEEEeecCC-eEEEEeC-CCcEEEEc---CCCcCcE--E-cccCCCcccceeEEEEeeCCeEEEEeC-CeeEEEEc
Q 036387 263 GFGILDVGYRSQD-EAWAAGG-SGVLLKTT---NGGKTWI--R-EKAADNIAANLYSVKFINEKKGFVLGN-DGVLLQYL 333 (334)
Q Consensus 263 ~~~~~~v~~~~~~-~~~~~G~-~G~i~~S~---DgG~tW~--~-~~~~~~~~~~l~~i~~~~~~~~~a~G~-~G~il~s~ 333 (334)
....++++.+++ .+|++.. .+.|++-. ..|+ .. + +............+++..++++|++.. .|.|.+.+
T Consensus 149 -~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~-~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 149 -DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ-ISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp -SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC-EEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred -ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc-ccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 123567777655 4666643 45565432 2332 21 1 111001123567888888889998864 45677664
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=93.05 E-value=4.8 Score=36.20 Aligned_cols=201 Identities=11% Similarity=0.058 Sum_probs=95.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEEEcCCEEEE-EcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIVGKPAILLH-TSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~~g~i~~-S~Dg 191 (334)
..+.+++|.| +.+.++.++.+|.|..=...|+.-....... ..+.++.+.+ +. ++.++..+.|.. ....
T Consensus 109 ~~v~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 109 NQVTCLAWSH-DGNSIVTGVENGELRLWNKTGALLNVLNFHR-------APIVSVKWNKDGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp BCEEEEEECT-TSSEEEEEETTSCEEEEETTSCEEEEECCCC-------SCEEEEEECTTSSEEEEEETTCCEEEEETTT
T ss_pred CceEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeeccCCC-------ccEEEEEECCCCCEEEEEecCCeEEEEECCC
Confidence 4789999987 4556555566675433222233222221111 1477888875 33 444455553332 2223
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEEE-ecCCCcceeeEeccccCCCeeeEEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL-SKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
++.-..+..... +........+. .....+..+.+.+++.+++.+.++.|+. ....++. ..... .....+..+.
T Consensus 181 ~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~--~~~~~--~~~~~i~~~~ 254 (425)
T 1r5m_A 181 GTVMQHFELKET-GGSSINAENHS-GDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP--TGKLI--GHHGPISVLE 254 (425)
T ss_dssp TEEEEEECCC-----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC--SEEEC--CCSSCEEEEE
T ss_pred CcEEEEeecccc-Cccceeecccc-CCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce--eeeec--cCCCceEEEE
Confidence 332222221100 00000000000 0000134456666666666666665543 2222221 11111 1112577888
Q ss_pred eecCCeEEE-EeCCCcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 271 YRSQDEAWA-AGGSGVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 271 ~~~~~~~~~-~G~~G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
|.+++..++ ++.+|.|..- .+.++.-..+.. ....+.++.+.+++.+++++.+|.|..+
T Consensus 255 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~l~~~~~d~~i~i~ 315 (425)
T 1r5m_A 255 FNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG---HSQSIVSASWVGDDKVISCSMDGSVRLW 315 (425)
T ss_dssp EETTTTEEEEEETTSCEEEECSSSBSCSEEECC---CSSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCccceEecC---CCccEEEEEECCCCEEEEEeCCCcEEEE
Confidence 877665544 4556766332 233333333322 2357899999988877777888887654
No 83
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=92.74 E-value=8 Score=37.86 Aligned_cols=108 Identities=13% Similarity=0.148 Sum_probs=61.8
Q ss_pred eEeeeeEeecCCEEEEE-cCCeE--EEecCCCcceeeEec-cccCCCeeeEEEEeecCCeEEEEe-CCCcE-EEEcCCCc
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGL--FLSKGTGITEEFEEV-PVQSRGFGILDVGYRSQDEAWAAG-GSGVL-LKTTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i--~~S~D~G~tW~w~~~-~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i-~~S~DgG~ 294 (334)
.+..+.|++++..++.+ .++.+ |...+.++ .... ........+.+++|.+++..++.| .++.| +...+.++
T Consensus 493 ~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~---~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 493 EITSVAFSNNGAFLVATDQSRKVIPYSVANNFE---LAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTE---ESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred ceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCc---eeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 36678888988876654 34443 22222232 1111 111112358899998887766654 56654 23344443
Q ss_pred CcE-EcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 295 TWI-REKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 295 tW~-~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
.-. .+... .....+.+++|.++++++.++.+|.|..+
T Consensus 570 ~~~~~~~~~-h~~~~v~~v~fs~d~~l~s~~~D~~i~lW 607 (611)
T 1nr0_A 570 DHPIIIKGA-HAMSSVNSVIWLNETTIVSAGQDSNIKFW 607 (611)
T ss_dssp SCCEEETTS-STTSCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred cccchhhcc-CcccCeeEEEEcCCCEEEEecCCCCEEEE
Confidence 222 22211 11357999999999997778899987654
No 84
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.59 E-value=5.3 Score=35.45 Aligned_cols=195 Identities=11% Similarity=0.113 Sum_probs=95.7
Q ss_pred CCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC-----C---e----EEEEcCCCcCeEeCcC-CCCcccCcceeEE
Q 036387 101 LSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR-----Q---T----LLETKDGGKTWAPRSI-PSAEEEDFNYRFN 167 (334)
Q Consensus 101 G~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~-----g---~----i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~ 167 (334)
-.+|+....+........+++.. .+.+|++|.. + . +++=+-.-.+|+++.. |.. .. ..
T Consensus 33 ~~~W~~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~--~~ 103 (318)
T 2woz_A 33 ENECYLTALAEQIPRNHSSIVTQ---QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA----RC--LF 103 (318)
T ss_dssp TTEEEEEEECTTSCSSEEEEECS---SSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC----BC--SC
T ss_pred CCceecccCCccCCccceEEEEE---CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc----cc--cc
Confidence 45798754432111223444443 3667877751 1 1 4443444678998742 221 11 11
Q ss_pred EEEEeCCeEEEEEcC--------CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC
Q 036387 168 SISFKGKEGWIVGKP--------AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG 239 (334)
Q Consensus 168 ~I~~~~~~~~~vG~~--------g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 239 (334)
++...++.+|++|.. ..+++-+-...+|+.+.. +|... + .| .....++.+|+.+..
T Consensus 104 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r-~--~~----------~~~~~~~~iyv~GG~ 167 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---LPIKV-Y--GH----------NVISHNGMIYCLGGK 167 (318)
T ss_dssp EEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---CSSCE-E--SC----------EEEEETTEEEEECCE
T ss_pred ceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---CCCcc-c--cc----------EEEEECCEEEEEcCC
Confidence 233346788887531 235555555678999863 22211 1 01 111246778887631
Q ss_pred -------CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCCc
Q 036387 240 -------GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADNI 305 (334)
Q Consensus 240 -------g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~~ 305 (334)
..+++-.-.-. +|+.++ .+........+. -++.+|++|.. ..+++-.=.-++|+.+... +.
T Consensus 168 ~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~ 242 (318)
T 2woz_A 168 TDDKKCTNRVFIYNPKKG--DWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF-PQ 242 (318)
T ss_dssp ESSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC-SS
T ss_pred CCCCCccceEEEEcCCCC--EEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC-CC
Confidence 12443333333 356653 222111122222 26789988752 2233333345689998763 22
Q ss_pred ccceeEEEEeeCCeEEEEeCC
Q 036387 306 AANLYSVKFINEKKGFVLGND 326 (334)
Q Consensus 306 ~~~l~~i~~~~~~~~~a~G~~ 326 (334)
...-.++... ++++|++|..
T Consensus 243 ~r~~~~~~~~-~~~i~v~GG~ 262 (318)
T 2woz_A 243 ERSSISLVSL-AGSLYAIGGF 262 (318)
T ss_dssp CCBSCEEEEE-TTEEEEECCB
T ss_pred cccceEEEEE-CCEEEEECCe
Confidence 3333344444 6789998753
No 85
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.55 E-value=4.7 Score=34.84 Aligned_cols=90 Identities=17% Similarity=0.141 Sum_probs=45.5
Q ss_pred ceEEecCCCCCcEEcccCCCCCeeeEEEEEecC-CCCEEEEEEcCCe--EEEEcCC-----CcCeEeCcCCCCcccCcce
Q 036387 93 QPAKSEEALSAWERVYIPVDPGVVLLDIAFVPD-DLNHGFLLGTRQT--LLETKDG-----GKTWAPRSIPSAEEEDFNY 164 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~-d~~~~~avG~~g~--i~~S~Dg-----G~TW~~~~~p~~~~~~~~~ 164 (334)
.||....+...++.+..-......+.+++|.|. |.+.++.++.+|. +|....+ +..|+.+..-... ..
T Consensus 36 ~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----~~ 111 (351)
T 3f3f_A 36 KVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDS----KG 111 (351)
T ss_dssp EEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCC----SS
T ss_pred EEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeeccc----CC
Confidence 456555555566654321112367999999863 3455555566675 3443332 2344433211111 11
Q ss_pred eEEEEEEeC---CeEEE-EEcCCEEE
Q 036387 165 RFNSISFKG---KEGWI-VGKPAILL 186 (334)
Q Consensus 165 ~~~~I~~~~---~~~~~-vG~~g~i~ 186 (334)
.+..|.+.+ +..++ ++..+.|.
T Consensus 112 ~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 112 SLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp CEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred ceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 477888874 33344 44555443
No 86
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.54 E-value=5.1 Score=35.20 Aligned_cols=200 Identities=13% Similarity=0.091 Sum_probs=100.5
Q ss_pred eEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC-----CeEEEEcCCCcCeEeCcC-CCCcccCcceeEE
Q 036387 94 PAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR-----QTLLETKDGGKTWAPRSI-PSAEEEDFNYRFN 167 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~-----g~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~ 167 (334)
+++=+-.-.+|+.+.....+ .....+... .+.+|++|.. ..+++=+=.-.+|+.+.. |.. .. ..
T Consensus 26 ~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~-~~- 95 (306)
T 3ii7_A 26 CRYFNPKDYSWTDIRCPFEK-RRDAACVFW---DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP----RD-SL- 95 (306)
T ss_dssp EEEEETTTTEEEECCCCSCC-CBSCEEEEE---TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC----CB-SC-
T ss_pred EEEecCCCCCEecCCCCCcc-cceeEEEEE---CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc----cc-ce-
Confidence 44444455689988642222 223344443 2678888642 234443334568998753 221 11 11
Q ss_pred EEEEeCCeEEEEEcC-------CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc--
Q 036387 168 SISFKGKEGWIVGKP-------AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-- 238 (334)
Q Consensus 168 ~I~~~~~~~~~vG~~-------g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-- 238 (334)
.+...++.+|+.|.. ..+++-+-...+|+.+... |.... .| .+ ...++.+|+.+.
T Consensus 96 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~---~~---------~~-~~~~~~iyv~GG~~ 159 (306)
T 3ii7_A 96 AACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSM---LTQRC---SH---------GM-VEANGLIYVCGGSL 159 (306)
T ss_dssp EEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCC---SSCCB---SC---------EE-EEETTEEEEECCEE
T ss_pred eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCC---cCCcc---ee---------EE-EEECCEEEEECCCC
Confidence 223347788887632 2355544456689998632 21110 00 11 123667887763
Q ss_pred --------CCeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCC
Q 036387 239 --------GGGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAAD 303 (334)
Q Consensus 239 --------~g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~ 303 (334)
...+++-.-.-. +|+.++ .+........+.+ ++.+|++|.. ..+++-.-.-++|+.+...
T Consensus 160 ~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~- 234 (306)
T 3ii7_A 160 GNNVSGRVLNSCEVYDPATE--TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM- 234 (306)
T ss_dssp SCTTTCEECCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC-
T ss_pred CCCCcccccceEEEeCCCCC--eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC-
Confidence 122333332223 456653 2322112222222 6789998763 2354444445689999653
Q ss_pred CcccceeEEEEeeCCeEEEEeC
Q 036387 304 NIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 304 ~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
+....-.++... ++++|++|.
T Consensus 235 p~~r~~~~~~~~-~~~i~v~GG 255 (306)
T 3ii7_A 235 PWKGVTVKCAAV-GSIVYVLAG 255 (306)
T ss_dssp SCCBSCCEEEEE-TTEEEEEEC
T ss_pred CCCccceeEEEE-CCEEEEEeC
Confidence 233333444444 678998875
No 87
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.47 E-value=4.9 Score=34.77 Aligned_cols=199 Identities=8% Similarity=0.032 Sum_probs=99.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC---CeEEEE-EcCC--EEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG---KEGWIV-GKPA--ILL 186 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~---~~~~~v-G~~g--~i~ 186 (334)
..+++|+|.| +.+.++.++.+|. ||....+...++....-..+ ...+.+|.|.+ +..++. +..+ .|+
T Consensus 12 ~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 12 DLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAH----DSSIVAIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECC----SSCEEEEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccC----CCcEEEEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 5789999987 4555555566675 45555555555543211111 11478888864 444444 4445 344
Q ss_pred EEcCC-----CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEEE-EcCCeEE--EecCCC--cceee
Q 036387 187 HTSDA-----GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWLL-VRGGGLF--LSKGTG--ITEEF 254 (334)
Q Consensus 187 ~S~Dg-----G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~~-~~~g~i~--~S~D~G--~tW~w 254 (334)
....+ ++.|+.+..- . .| ...+..+.+.++ +..+++ +.++.|. -...+. .++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~~---~-------~~----~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~ 152 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCTL---N-------DS----KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTL 152 (351)
T ss_dssp EECTTSCTTSSCSEEEEEEE---C-------CC----SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEE
T ss_pred ecCCCcccccccCcceeeee---c-------cc----CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccc
Confidence 43332 2344444321 0 11 113556777777 765554 4555543 222221 11111
Q ss_pred Ee----cccc--CCCeeeEEEEeecC---CeEE-EEeCCCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCC----e-
Q 036387 255 EE----VPVQ--SRGFGILDVGYRSQ---DEAW-AAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEK----K- 319 (334)
Q Consensus 255 ~~----~~~~--~~~~~~~~v~~~~~---~~~~-~~G~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~----~- 319 (334)
.. .... .....+..+.+.+. +..+ +.+.++.+..-.......+.+..-..-...+.++.+.+++ +
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~ 232 (351)
T 3f3f_A 153 TSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQL 232 (351)
T ss_dssp EEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEE
T ss_pred cccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceE
Confidence 11 0011 11234667777653 4444 4455665544433344444433321224679999999875 4
Q ss_pred EEEEeCCeeEEEE
Q 036387 320 GFVLGNDGVLLQY 332 (334)
Q Consensus 320 ~~a~G~~G~il~s 332 (334)
++.++.+|.|..+
T Consensus 233 l~s~~~dg~i~iw 245 (351)
T 3f3f_A 233 IATGCKDGRIRIF 245 (351)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEEcCCCeEEEE
Confidence 4455678876644
No 88
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.43 E-value=5 Score=34.82 Aligned_cols=190 Identities=15% Similarity=0.155 Sum_probs=96.3
Q ss_pred eeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeC-cCCCCcccCcceeEEEEEEeC-CeEEEEEcC----------
Q 036387 116 VLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPR-SIPSAEEEDFNYRFNSISFKG-KEGWIVGKP---------- 182 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~-~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~---------- 182 (334)
...++++.+ +.+++|++.....|++ ..+ |+ .+.. ..... ........+|.+++ +++|+....
T Consensus 72 ~~~~i~~~~-~~g~l~v~~~~~~l~~~d~~-g~-~~~~~~~~~~--~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 72 IPAGCQCDR-DANQLFVADMRLGLLVVQTD-GT-FEEIAKKDSE--GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp CEEEEEECS-SSSEEEEEETTTEEEEEETT-SC-EEECCSBCTT--SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCceEEEec-CCCcEEEEECCCCEEEEeCC-CC-EEEEEeccCC--CccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 467888864 2257888775444443 445 44 4433 21110 00112356777775 678877532
Q ss_pred ------CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEe----ecC-CEEEEEc-CCeEEEec-C-C
Q 036387 183 ------AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWR----ADG-GLWLLVR-GGGLFLSK-G-T 248 (334)
Q Consensus 183 ------g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~----~~g-~~~~~~~-~g~i~~S~-D-~ 248 (334)
+.|++-+-.| +.+.+.... . ....+.+. +++ .+|++.. .+.|++-. + .
T Consensus 147 ~~~~~~~~l~~~~~~g-~~~~~~~~~--~---------------~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTDG-QMIQVDTAF--Q---------------FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp TTSSSCEEEEEECTTS-CEEEEEEEE--S---------------SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET
T ss_pred cccCCCCeEEEECCCC-CEEEeccCC--C---------------CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC
Confidence 4677665333 344332110 0 01234555 666 4666653 45565432 1 2
Q ss_pred CcceeeE-ec-cccCCC-eeeEEEEeecCCeEEEEe-CCCcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCCe-EEE
Q 036387 249 GITEEFE-EV-PVQSRG-FGILDVGYRSQDEAWAAG-GSGVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEKK-GFV 322 (334)
Q Consensus 249 G~tW~w~-~~-~~~~~~-~~~~~v~~~~~~~~~~~G-~~G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a 322 (334)
|+ ..-. .. ..+... ....++++.+++.+|++. ..+.|++- .+.|+.-+.+..+ .....++++.++++ +|+
T Consensus 209 g~-~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~---~~~~~~i~~~~dg~~l~v 284 (314)
T 1pjx_A 209 AK-IENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCP---FEKPSNLHFKPQTKTIFV 284 (314)
T ss_dssp TE-EEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECS---SSCEEEEEECTTSSEEEE
T ss_pred Cc-cccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC---CCCceeEEECCCCCEEEE
Confidence 32 1000 11 112111 235677777788899874 34555444 3435544444432 25678899877776 887
Q ss_pred EeCC-eeEEEE
Q 036387 323 LGND-GVLLQY 332 (334)
Q Consensus 323 ~G~~-G~il~s 332 (334)
+... |.|++.
T Consensus 285 ~~~~~~~l~~~ 295 (314)
T 1pjx_A 285 TEHENNAVWKF 295 (314)
T ss_dssp EETTTTEEEEE
T ss_pred EeCCCCeEEEE
Confidence 7644 455554
No 89
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=92.39 E-value=9.8 Score=38.05 Aligned_cols=188 Identities=9% Similarity=-0.012 Sum_probs=93.0
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-C-eEEEEEcCCEEEEEc-C
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-K-EGWIVGKPAILLHTS-D 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~-~~~~vG~~g~i~~S~-D 190 (334)
..+.+|+|.| |...+.+++.+|.|.. ..+.|+.=....... ..+.++.|.+ + .+..++..+.|..-+ +
T Consensus 14 ~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 85 (814)
T 3mkq_A 14 DRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE-------TPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (814)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------SCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEEecCC-------CcEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 4689999998 4455555555665422 223343222222111 1478888885 3 344445556444332 3
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.|+.=..+.. |. ..+..+.|.+++..+++ +.++.|. +..+.+. ...... ......+..
T Consensus 86 ~~~~~~~~~~-------------~~----~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--~~~~~~-~~~~~~v~~ 145 (814)
T 3mkq_A 86 TGEKVVDFEA-------------HP----DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQTF-EGHEHFVMC 145 (814)
T ss_dssp TCCEEEEEEC-------------CS----SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS--EEEEEE-ECCSSCEEE
T ss_pred CCcEEEEEec-------------CC----CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc--eEEEEE-cCCCCcEEE
Confidence 3332222221 11 13556778888875554 4455443 2323331 112211 111225778
Q ss_pred EEeec-CCeEEE-EeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEee--CCeEE-EEeCCeeEEEE
Q 036387 269 VGYRS-QDEAWA-AGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFIN--EKKGF-VLGNDGVLLQY 332 (334)
Q Consensus 269 v~~~~-~~~~~~-~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~--~~~~~-a~G~~G~il~s 332 (334)
+.|.+ ++..++ ++.+|.|.. ..+.++.-..+.. .....+..+.+.+ ++..+ .++.+|.|..+
T Consensus 146 ~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~ 213 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (814)
T ss_dssp EEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEEC--CCTTCCCEEEECCSTTCCEEEEECTTSEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEec--CCCCCEEEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 88876 444444 455676533 3344443333333 2235688888875 55544 45677776554
No 90
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.38 E-value=6.9 Score=36.27 Aligned_cols=194 Identities=6% Similarity=-0.091 Sum_probs=88.4
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEE-EEcCCEEEEEcC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWI-VGKPAILLHTSD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~-vG~~g~i~~S~D 190 (334)
..+++|+|.|.+++.+...+.+|.|.. ..+.+..-...... .+ .-.+++|.|.+ ...++ ++..+.|..-+=
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~-gH----~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~ 194 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI-GA----GGSITGLKFNPLNTNQFYASSMEGTTRLQDF 194 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC-SS----SCCCCEEEECSSCTTEEEEECSSSCEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc-CC----CCCEEEEEEeCCCCCEEEEEeCCCEEEEeec
Confidence 468999999865554444445676543 22222211111111 11 12477888874 33444 444554433221
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.++.-+.+.... .. ...+..+.+.+++.+++++ .++.|.. ..++..- .. +......+.+
T Consensus 195 ~~~~~~~~~~~~---~~-----------~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~---~~--~~~h~~~v~~ 255 (435)
T 4e54_B 195 KGNILRVFASSD---TI-----------NIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKEL---WN--LRMHKKKVTH 255 (435)
T ss_dssp TSCEEEEEECCS---SC-----------SCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBC---CC--SBCCSSCEEE
T ss_pred cCCceeEEeccC---CC-----------CccEEEEEECCCCCEEEEEeCCCcEeeeccCccee---EE--EecccceEEe
Confidence 222222222110 00 0012345667777766655 3455432 2232211 11 1111235788
Q ss_pred EEeecCC-eEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 269 VGYRSQD-EAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 269 v~~~~~~-~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
+.|.+.+ .++++ +.++.|.. -...++.-..+.....-...+.+++|.+++..++ ++.+|.|.-+
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 8887654 35544 45665421 1111221111111001134688899887666554 5678876544
No 91
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.20 E-value=5.2 Score=40.41 Aligned_cols=208 Identities=11% Similarity=0.068 Sum_probs=96.5
Q ss_pred CCCCcEEcc-c------CCCCCeeeEEEEEecCCCCEEEEEEcC-------CeEEEEcCCCcCeEeCcC-CCCcccCcce
Q 036387 100 ALSAWERVY-I------PVDPGVVLLDIAFVPDDLNHGFLLGTR-------QTLLETKDGGKTWAPRSI-PSAEEEDFNY 164 (334)
Q Consensus 100 gG~tW~~~~-~------p~~~~~~l~~I~~~p~d~~~~~avG~~-------g~i~~S~DgG~TW~~~~~-p~~~~~~~~~ 164 (334)
.-.+|+.+. . |.. -..++++..+ ..+.+|++|.. ..+++=+-.-.+|+.+.. |.. ..
T Consensus 420 ~~~~W~~~~~~~p~~~~p~~--R~~hs~~~~~-~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~----R~- 491 (695)
T 2zwa_A 420 HYDKIDMKNIEVSSSEVPVA--RMCHTFTTIS-RNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT----RF- 491 (695)
T ss_dssp CSSCEEEEECCCCCSCCCCC--CBSCEEEEET-TTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC----CB-
T ss_pred CCCeEEEeccCCCCCCCCcc--ccceEEEEEc-cCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC----cc-
Confidence 356799887 2 221 2334555542 03678888742 123333333467998752 211 11
Q ss_pred eEEEEEEeCCeEEEEEcCC---EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec-CCEEEEEcC-
Q 036387 165 RFNSISFKGKEGWIVGKPA---ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD-GGLWLLVRG- 239 (334)
Q Consensus 165 ~~~~I~~~~~~~~~vG~~g---~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~-g~~~~~~~~- 239 (334)
....+.+.++.+|+.|... .+++-+-.-.+|+.+.....+|... + .| ..+.+..+ +.+|+.+..
T Consensus 492 ~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r-~--~~--------~a~v~~~~~~~iyv~GG~~ 560 (695)
T 2zwa_A 492 RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNS-L--VS--------AGLEFDPVSKQGIILGGGF 560 (695)
T ss_dssp SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSC-C--BS--------CEEEEETTTTEEEEECCBC
T ss_pred cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcc-c--ce--------eEEEEeCCCCEEEEECCcC
Confidence 1222222367888876421 3555555567899987421111110 0 00 01222222 568887642
Q ss_pred -------CeEEEecCCCcce----eeEeccc-c-CCCeeeEEEEeecCCeEEEEeCC---------CcEEEEcCCCcCcE
Q 036387 240 -------GGLFLSKGTGITE----EFEEVPV-Q-SRGFGILDVGYRSQDEAWAAGGS---------GVLLKTTNGGKTWI 297 (334)
Q Consensus 240 -------g~i~~S~D~G~tW----~w~~~~~-~-~~~~~~~~v~~~~~~~~~~~G~~---------G~i~~S~DgG~tW~ 297 (334)
..+++-.-...+| +|+.+.. + ........+. .+++.+|++|+. ..++.-.-.-.+|+
T Consensus 561 ~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 561 MDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKY-ITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp TTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEE-EETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred CCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEE-eCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 1243322222232 4666532 2 1111222222 334789998762 23544444456899
Q ss_pred EcccCCCc-----c-cceeEEEEeeCCeEEEEeCCe
Q 036387 298 REKAADNI-----A-ANLYSVKFINEKKGFVLGNDG 327 (334)
Q Consensus 298 ~~~~~~~~-----~-~~l~~i~~~~~~~~~a~G~~G 327 (334)
.+..+... + ..-.+....+++++|++|..+
T Consensus 640 ~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 640 SIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp ECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred EeeccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 76553110 0 001334444556899988754
No 92
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.01 E-value=10 Score=37.54 Aligned_cols=149 Identities=11% Similarity=0.009 Sum_probs=77.9
Q ss_pred eEEEEEEeC-CeEEE-EEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE-EEcCCe
Q 036387 165 RFNSISFKG-KEGWI-VGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL-LVRGGG 241 (334)
Q Consensus 165 ~~~~I~~~~-~~~~~-vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~-~~~~g~ 241 (334)
.+.++++.+ +...+ ++..|.+..-+..+ -+..+. .. .+ -....+..+.|++||..++ ++.+|.
T Consensus 87 ~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~-~~-----------~~~~sv~svafSPDG~~LAsgs~DGt 152 (588)
T 2j04_A 87 YPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SK-GN-----------LSSRTYHCFEWNPIESSIVVGNEDGE 152 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CS-SC-----------STTTCEEEEEECSSSSCEEEEETTSE
T ss_pred cEEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CC-Cc-----------cccccEEEEEEcCCCCEEEEEcCCCE
Confidence 588899986 44444 45566554443322 222221 10 00 0011356788999998555 455666
Q ss_pred E-EEecCCCcc--ee---eEecc--ccCCCeeeEEEEeecCCeEEEEeCCCcE-EEEcCCCc---CcEEcccCCCcccce
Q 036387 242 L-FLSKGTGIT--EE---FEEVP--VQSRGFGILDVGYRSQDEAWAAGGSGVL-LKTTNGGK---TWIREKAADNIAANL 309 (334)
Q Consensus 242 i-~~S~D~G~t--W~---w~~~~--~~~~~~~~~~v~~~~~~~~~~~G~~G~i-~~S~DgG~---tW~~~~~~~~~~~~l 309 (334)
| .+...+++- =+ ...+. .......+..++|.+++ +.+++.++.+ ....++++ -|+.+.. .....+
T Consensus 153 VkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~--~h~~~V 229 (588)
T 2j04_A 153 LQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQN--ASRRKI 229 (588)
T ss_dssp EEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEEC--CCSSCC
T ss_pred EEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecc--cccCcE
Confidence 5 334444420 00 11111 11112368899998877 6666666665 33445555 2445532 123579
Q ss_pred eEEEEeeCCeEEEEeCCeeEEEE
Q 036387 310 YSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 310 ~~i~~~~~~~~~a~G~~G~il~s 332 (334)
.+|+|. + +.+|++.+|.|..+
T Consensus 230 ~svaFs-g-~~LASa~~~tIkLW 250 (588)
T 2j04_A 230 TDLKIV-D-YKVVLTCPGYVHKI 250 (588)
T ss_dssp CCEEEE-T-TEEEEECSSEEEEE
T ss_pred EEEEEE-C-CEEEEEeCCeEEEE
Confidence 999998 4 45555556776654
No 93
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=91.76 E-value=6 Score=34.29 Aligned_cols=183 Identities=13% Similarity=0.101 Sum_probs=92.5
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-C-eEEEEEcCCEEEEEc-C
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-K-EGWIVGKPAILLHTS-D 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~-~~~~vG~~g~i~~S~-D 190 (334)
..+.++.+.| +.+.++..+.+|.|.. ....++.-....... ..+..+.+.+ + .++..+..+.|..-+ .
T Consensus 142 ~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 213 (337)
T 1gxr_A 142 PACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-------DGASCIDISNDGTKLWTGGLDNTVRSWDLR 213 (337)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeeccc-------CceEEEEECCCCCEEEEEecCCcEEEEECC
Confidence 5688999987 4556666666676433 223332211111111 1477888875 3 444445566544432 2
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.++.-..+.. + ..+..+.+.+++..++++ .++.+. ...+.++. .... .....+..
T Consensus 214 ~~~~~~~~~~----~--------------~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~---~~~~--~~~~~v~~ 270 (337)
T 1gxr_A 214 EGRQLQQHDF----T--------------SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK---YQLH--LHESCVLS 270 (337)
T ss_dssp TTEEEEEEEC----S--------------SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE---EEEC--CCSSCEEE
T ss_pred CCceEeeecC----C--------------CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe---EEEc--CCccceeE
Confidence 2222111110 0 124456777777765554 455443 33333332 1111 11235778
Q ss_pred EEeecCCeEEEE-eCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 269 VGYRSQDEAWAA-GGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 269 v~~~~~~~~~~~-G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
+.|.+++..+++ +.+|.+. ...+.++.-.... ....+.++.+.++++.++ ++.+|.|..+
T Consensus 271 ~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSK----ESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEecCCCcEEEEECCCCeEEEEec----CCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 888776665554 5567552 2223333222221 235788999987766555 5688876544
No 94
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.67 E-value=2.3 Score=39.22 Aligned_cols=109 Identities=14% Similarity=0.148 Sum_probs=64.2
Q ss_pred eeeEeecCCEEEEEcCCeEEEecCCCcceeeEecccc-CCCeeeEEEEeecC----CeEEEEeCC--------CcEEEEc
Q 036387 224 NMGWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQ-SRGFGILDVGYRSQ----DEAWAAGGS--------GVLLKTT 290 (334)
Q Consensus 224 ~~~~~~~g~~~~~~~~g~i~~S~D~G~tW~w~~~~~~-~~~~~~~~v~~~~~----~~~~~~G~~--------G~i~~S~ 290 (334)
.+.+.++|.+|++...+.|++-...|++ .+..+++. ......++|++.++ +.+|++-.. ..|++-+
T Consensus 33 ~ia~~pdG~l~V~e~~g~I~~~d~~G~~-~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~ 111 (354)
T 3a9g_A 33 SIAPLGGGRYLVTERPGRLVLISPSGKK-LVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGR 111 (354)
T ss_dssp EEEEEETTEEEEEETTTEEEEECSSCEE-EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEE
T ss_pred EEEEcCCCeEEEEeCCCEEEEEeCCCce-EeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEE
Confidence 4667889999999888888877545541 22332211 11235788888764 688886432 4565554
Q ss_pred CCCc--C---cEEccc--CCCcccceeEEEEeeCCeEEEE-eC-------------CeeEEEEc
Q 036387 291 NGGK--T---WIREKA--ADNIAANLYSVKFINEKKGFVL-GN-------------DGVLLQYL 333 (334)
Q Consensus 291 DgG~--t---W~~~~~--~~~~~~~l~~i~~~~~~~~~a~-G~-------------~G~il~s~ 333 (334)
..+. . .+.+-. +......-..|+|.+++.+|++ |+ .|.|+|.+
T Consensus 112 ~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~ 175 (354)
T 3a9g_A 112 LDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVD 175 (354)
T ss_dssp ECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred ECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence 4333 2 333211 1111123467889889999987 32 36788864
No 95
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=91.57 E-value=0.75 Score=41.99 Aligned_cols=110 Identities=20% Similarity=0.263 Sum_probs=57.4
Q ss_pred eEeeeeEeecCCEEEEEcC-------CeEEEecC-CCcceeeEeccc--cCCCeeeEEEEeecCCeEEEEeCCCcEEE-E
Q 036387 221 RIQNMGWRADGGLWLLVRG-------GGLFLSKG-TGITEEFEEVPV--QSRGFGILDVGYRSQDEAWAAGGSGVLLK-T 289 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~~-------g~i~~S~D-~G~tW~w~~~~~--~~~~~~~~~v~~~~~~~~~~~G~~G~i~~-S 289 (334)
.|..+.|++||.+++.+.. +.++.-.. .|.. . ..... ......+.+++|.+++.+++++.+|.|.. .
T Consensus 44 ~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~-~-~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd 121 (357)
T 4g56_B 44 QIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAP-N-ESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWE 121 (357)
T ss_dssp EEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC----C-GGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-
T ss_pred CEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCc-c-eeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEee
Confidence 5778899999998776542 22322111 1110 0 00000 00112588999998888888888887632 1
Q ss_pred cCCCcCcEEcccC-CCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 290 TNGGKTWIREKAA-DNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 290 ~DgG~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
...|+.-...... ..-...+.+|+|.++++.++ ++.+|.|..+
T Consensus 122 ~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iw 166 (357)
T 4g56_B 122 ILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVW 166 (357)
T ss_dssp -------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 1112111111000 01135689999998776655 4678877654
No 96
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=91.51 E-value=7.2 Score=34.65 Aligned_cols=105 Identities=11% Similarity=0.166 Sum_probs=56.4
Q ss_pred EeeeeEeecCCEEEEEc-CCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEE-eCCCcEEE-EcCCCcCcE
Q 036387 222 IQNMGWRADGGLWLLVR-GGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAA-GGSGVLLK-TTNGGKTWI 297 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~-~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~ 297 (334)
+..+.|.+++.+++.+. ++.|. +....++ ... .+......+..++|.+++..+++ +.+|.|.. ....+ +
T Consensus 209 v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~---~~~-~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~---~ 281 (321)
T 3ow8_A 209 IRSLTFSPDSQLLVTASDDGYIKIYDVQHAN---LAG-TLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR---T 281 (321)
T ss_dssp CCEEEECTTSCEEEEECTTSCEEEEETTTCC---EEE-EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT---E
T ss_pred eeEEEEcCCCCEEEEEcCCCeEEEEECCCcc---eeE-EEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC---E
Confidence 44577788887666553 44442 2222222 111 11111225788888876655554 55676522 22323 3
Q ss_pred EcccCCCcccceeEEEEeeCCe-EEEEeCCeeEEEEc
Q 036387 298 REKAADNIAANLYSVKFINEKK-GFVLGNDGVLLQYL 333 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~~-~~a~G~~G~il~s~ 333 (334)
.+..-..-...+.+++|.++++ ++.++.+|.|..++
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 3322112235799999987665 55567888876543
No 97
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.45 E-value=7.4 Score=34.72 Aligned_cols=169 Identities=9% Similarity=0.105 Sum_probs=74.8
Q ss_pred CeeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEE--EE
Q 036387 114 GVVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAIL--LH 187 (334)
Q Consensus 114 ~~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i--~~ 187 (334)
...+.++.|.| +.+.++.++.++.|.. ..+.++.|.... +...+ ...+.+|.+.+ +..++. +..+.| |.
T Consensus 100 ~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 100 NRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPL----RSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp SSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSC----CSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred CCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeeccc----CCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 36789999987 4556666666676533 344455454332 11101 12578888885 444444 444433 32
Q ss_pred EcCCCCCeEEeecCC----CCC-CCc--ccccccCccccceEeeeeEeecCCEEEE-EcCCeE--EEecCCCcceeeEec
Q 036387 188 TSDAGESWERIPLSS----QLP-GDM--AFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGL--FLSKGTGITEEFEEV 257 (334)
Q Consensus 188 S~DgG~TW~~~~~~~----~l~-g~~--~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i--~~S~D~G~tW~w~~~ 257 (334)
..... ........ .++ +.. .+ .| ...+..+.+.+++..+++ +.++.| |....+... ...+
T Consensus 175 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~--~~~~ 244 (377)
T 3dwl_C 175 AYVRD--VDAKPEASVWGSRLPFNTVCAEY--PS----GGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP--PRAL 244 (377)
T ss_dssp ECCSS--CC-CCCSCSSCSCCCEEEEEECC--CC----SSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC--EEEC
T ss_pred EEecc--cCCCccccccccccchhhhhhcc--cC----CceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc--ceee
Confidence 22110 00000000 000 000 01 11 123566778888875554 455554 323222210 0001
Q ss_pred -cccCCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcE
Q 036387 258 -PVQSRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWI 297 (334)
Q Consensus 258 -~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~ 297 (334)
.+......+..+.|.+++..+++|.++.+..-.+....|+
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~ 285 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWA 285 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---C
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceE
Confidence 1111123578889988888888877655433333333343
No 98
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=91.26 E-value=12 Score=36.63 Aligned_cols=106 Identities=14% Similarity=0.269 Sum_probs=58.8
Q ss_pred eEeeeeEeecCCEEEEEcCC----eEEEecCCCcceeeEeccccCCCeeeEEEEeecCCe--EEEEeCCCcEEEEcCCCc
Q 036387 221 RIQNMGWRADGGLWLLVRGG----GLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE--AWAAGGSGVLLKTTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~~g----~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~S~DgG~ 294 (334)
.+..+.|.+++..++++..+ +-.+--|.|.. -. .+......+.+++|.+++. +..++.++.+..- | ..
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~--~~--~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lw-d-~~ 178 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS--NG--NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIF-E-GP 178 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB--CB--CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEE-E-TT
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC--cc--eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEE-E-CC
Confidence 35678888888866654322 22333344431 11 1222223578999987653 4444567765332 2 33
Q ss_pred CcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 295 TWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 295 tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
+.+.+..-..-...+++++|.++++.+++ +.+|.|.-+
T Consensus 179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lw 217 (611)
T 1nr0_A 179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLY 217 (611)
T ss_dssp TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEE
Confidence 44443321122357999999988877664 678877654
No 99
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=91.22 E-value=7.3 Score=34.20 Aligned_cols=187 Identities=7% Similarity=-0.017 Sum_probs=92.4
Q ss_pred eEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEcC-CEEEEEcCCCC
Q 036387 117 LLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGKP-AILLHTSDAGE 193 (334)
Q Consensus 117 l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~-g~i~~S~DgG~ 193 (334)
..+..+.| +.+.+|+++. .+.|++=...|+ .+....+.. ....+.+++ +++|++... +.|++-+-.|+
T Consensus 47 ~egp~~~~-~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~-------~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~ 117 (305)
T 3dr2_A 47 SEGPAWWE-AQRTLVWSDLVGRRVLGWREDGT-VDVLLDATA-------FTNGNAVDAQQRLVHCEHGRRAITRSDADGQ 117 (305)
T ss_dssp EEEEEEEG-GGTEEEEEETTTTEEEEEETTSC-EEEEEESCS-------CEEEEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred ccCCeEeC-CCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCC-------ccceeeECCCCCEEEEECCCCEEEEECCCCC
Confidence 34566666 4455666664 355554332333 333222221 356777774 677777543 56777654444
Q ss_pred CeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE----c--------------CCeEEEecC-CCcceee
Q 036387 194 SWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV----R--------------GGGLFLSKG-TGITEEF 254 (334)
Q Consensus 194 TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~----~--------------~g~i~~S~D-~G~tW~w 254 (334)
.+.+.... .+. .+ ..+..+.+.++|.+|++. . .+.||+-.- .|+ +
T Consensus 118 -~~~~~~~~--~~~-~~---------~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~---~ 181 (305)
T 3dr2_A 118 -AHLLVGRY--AGK-RL---------NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP---L 181 (305)
T ss_dssp -EEEEECEE--TTE-EC---------SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC---C
T ss_pred -EEEEEecc--CCC-cc---------CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc---E
Confidence 55554211 110 00 012346667888999852 1 256776553 343 2
Q ss_pred EeccccCCCeeeEEEEeecCCe-EEEEeCC------CcEEEE-cCCCcCcEEccc-CCCcccceeEEEEeeCCeEEEEeC
Q 036387 255 EEVPVQSRGFGILDVGYRSQDE-AWAAGGS------GVLLKT-TNGGKTWIREKA-ADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 255 ~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~------G~i~~S-~DgG~tW~~~~~-~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
+.+. .. ....+++|.+++. +|++... +.|++- .+++. ...... ..........|.+..++++|++..
T Consensus 182 ~~~~-~~--~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~ 257 (305)
T 3dr2_A 182 QRMA-DL--DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSSG 257 (305)
T ss_dssp EEEE-EE--SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECCS
T ss_pred EEEe-cC--CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEecC
Confidence 3222 11 1235677766654 6776443 445432 23222 211110 001122345678888888998886
Q ss_pred CeeEEEEc
Q 036387 326 DGVLLQYL 333 (334)
Q Consensus 326 ~G~il~s~ 333 (334)
+| |.+.+
T Consensus 258 ~g-v~~~~ 264 (305)
T 3dr2_A 258 TG-VCVFD 264 (305)
T ss_dssp SE-EEEEC
T ss_pred Cc-EEEEC
Confidence 66 55543
No 100
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=90.82 E-value=8.2 Score=34.09 Aligned_cols=202 Identities=11% Similarity=0.065 Sum_probs=98.7
Q ss_pred eEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC-----C-------eEEEEcCCCcCeEeCcC-CCCccc
Q 036387 94 PAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR-----Q-------TLLETKDGGKTWAPRSI-PSAEEE 160 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~-----g-------~i~~S~DgG~TW~~~~~-p~~~~~ 160 (334)
++.=+-..++|+....|........+++.. .+.+|++|.. + .+++=.-.-.+|+++.. |..
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--- 88 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTK---ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSP--- 88 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECT---TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSC---
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEE---CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcc---
Confidence 333344456798754443211223334443 3567777641 1 13333334567988742 211
Q ss_pred CcceeEEEEEEeCCeEEEEEcC---------CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC
Q 036387 161 DFNYRFNSISFKGKEGWIVGKP---------AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG 231 (334)
Q Consensus 161 ~~~~~~~~I~~~~~~~~~vG~~---------g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g 231 (334)
. .. ..+...++.+|++|.. ..+++-+-.-.+|+.+.. +|... + .| .....++
T Consensus 89 -r-~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r-~--~~----------~~~~~~~ 149 (315)
T 4asc_A 89 -R-CL-FGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVV-Y--GH----------TVLSHMD 149 (315)
T ss_dssp -E-ES-CEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCC-B--SC----------EEEEETT
T ss_pred -h-hc-eeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcc-c--ce----------eEEEECC
Confidence 1 11 1233447788887641 235555555668998863 22211 0 01 1112456
Q ss_pred CEEEEEcC-------CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC-C-----cEEEEcCCCcCcE
Q 036387 232 GLWLLVRG-------GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS-G-----VLLKTTNGGKTWI 297 (334)
Q Consensus 232 ~~~~~~~~-------g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~-G-----~i~~S~DgG~tW~ 297 (334)
.+|+.+.. ..+++-.-.-. +|+.++ .|........+.+ ++.+|++|.. + .+++-.-.-.+|+
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEE
Confidence 78887642 23444333333 466654 2322112222222 6788888752 1 3444433456899
Q ss_pred EcccCCCcccceeEEEEeeCCeEEEEeCC
Q 036387 298 REKAADNIAANLYSVKFINEKKGFVLGND 326 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~~~~a~G~~ 326 (334)
.+... +....-.++... ++++|++|..
T Consensus 226 ~~~~~-p~~r~~~~~~~~-~~~l~v~GG~ 252 (315)
T 4asc_A 226 PFEAF-PQERSSLSLVSL-VGTLYAIGGF 252 (315)
T ss_dssp EECCC-SSCCBSCEEEEE-TTEEEEEEEE
T ss_pred ECCCC-CCcccceeEEEE-CCEEEEECCc
Confidence 99753 233333444444 6789988753
No 101
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=90.70 E-value=7.9 Score=33.71 Aligned_cols=195 Identities=10% Similarity=0.174 Sum_probs=89.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC---CeEEEE-EcCCEEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG---KEGWIV-GKPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~---~~~~~v-G~~g~i~~S 188 (334)
..+++++|.| +.+.+...+.++.|.. ..+++ +.+.+. +.. +. -.+.+|.|.+ +..++. +..+.|..-
T Consensus 10 ~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~g-H~----~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 10 EMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGE-THKLIDTLTG-HE----GPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEBCSS-CBCCCEEECC-CS----SCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred CceEEEEECC-CCCEEEEEeCCCEEEEEecCCC-CcEEEEEEcc-cc----CCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 5789999987 4556555566776432 22211 221111 111 11 1477888852 344444 445544332
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec--CCEEEE-EcCCeEEE-ecCCCcceeeEeccccCCCe
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD--GGLWLL-VRGGGLFL-SKGTGITEEFEEVPVQSRGF 264 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~--g~~~~~-~~~g~i~~-S~D~G~tW~w~~~~~~~~~~ 264 (334)
+=....|+.+.. + ..|. ..+..+.|.++ +.++++ +.++.|.. ....+..+ ..........
T Consensus 83 d~~~~~~~~~~~---~-------~~h~----~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~--~~~~~~~h~~ 146 (297)
T 2pm7_B 83 KEENGRWSQIAV---H-------AVHS----ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT--SPIIIDAHAI 146 (297)
T ss_dssp EBSSSCBCCCEE---E-------CCCS----SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB--CCEEEECCSS
T ss_pred EcCCCceEEEEE---e-------ecCC----CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce--eeeeeecccC
Confidence 111112322211 0 0111 13556777765 555544 44554421 22222111 1111111112
Q ss_pred eeEEEEeecC-------------CeEEE-EeCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeCC---eEEE-Ee
Q 036387 265 GILDVGYRSQ-------------DEAWA-AGGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINEK---KGFV-LG 324 (334)
Q Consensus 265 ~~~~v~~~~~-------------~~~~~-~G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~---~~~a-~G 324 (334)
.+..+.|.+. +..++ ++.++.| |....+...|+....-..-...+.+|+|.+++ ..+| ++
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 4667777653 23444 4556754 44444444555443211123579999998763 5555 45
Q ss_pred CCeeEEEE
Q 036387 325 NDGVLLQY 332 (334)
Q Consensus 325 ~~G~il~s 332 (334)
.+|.|.-+
T Consensus 227 ~D~~v~iW 234 (297)
T 2pm7_B 227 QDRTCIIW 234 (297)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 78876543
No 102
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.65 E-value=8.1 Score=33.72 Aligned_cols=200 Identities=8% Similarity=0.047 Sum_probs=99.2
Q ss_pred eEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC------CeEEEEcCCCcC---eEeCcC-CCCcccCcc
Q 036387 94 PAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR------QTLLETKDGGKT---WAPRSI-PSAEEEDFN 163 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~------g~i~~S~DgG~T---W~~~~~-p~~~~~~~~ 163 (334)
+++=+-...+|+.+.....+ .....++.. + +.+|++|.. ..+++=+-.-.+ |+.+.. |.. ..
T Consensus 33 ~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~-~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~----r~ 104 (301)
T 2vpj_A 33 VEKYDPKTQEWSFLPSITRK-RRYVASVSL--H-DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR----RG 104 (301)
T ss_dssp EEEEETTTTEEEECCCCSSC-CBSCEEEEE--T-TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC----CB
T ss_pred EEEEcCCCCeEEeCCCCChh-hccccEEEE--C-CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC----cc
Confidence 33333345689987632211 223344443 2 678887642 124443333455 998742 221 11
Q ss_pred eeEEEEEEeCCeEEEEEc------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE
Q 036387 164 YRFNSISFKGKEGWIVGK------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV 237 (334)
Q Consensus 164 ~~~~~I~~~~~~~~~vG~------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~ 237 (334)
.. .+...++.+|+.|. ...+++-+=...+|+.+... |.... .+ .....++.+|+.+
T Consensus 105 -~~-~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~---~~----------~~~~~~~~iyv~G 166 (301)
T 2vpj_A 105 -LA-GATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDM---QTARE---GA----------GLVVASGVIYCLG 166 (301)
T ss_dssp -SC-EEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC---SSCCB---SC----------EEEEETTEEEEEC
T ss_pred -ce-eEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCC---CCCcc---cc----------eEEEECCEEEEEC
Confidence 11 23334678888763 12455555556789998642 21110 00 1112367788876
Q ss_pred cC------CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCC
Q 036387 238 RG------GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADN 304 (334)
Q Consensus 238 ~~------g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~ 304 (334)
.. ..+++-.-...+ |+.++ .|........+. .++.+|++|.. ..++.-.=.-.+|+.+... +
T Consensus 167 G~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-p 241 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGH--WTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM-T 241 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTE--EEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC-S
T ss_pred CCCCCcccceEEEEeCCCCc--EEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC-C
Confidence 31 224433323334 56653 232211222222 26789998763 2344443345689998753 2
Q ss_pred cccceeEEEEeeCCeEEEEeC
Q 036387 305 IAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 305 ~~~~l~~i~~~~~~~~~a~G~ 325 (334)
......++... ++++|++|.
T Consensus 242 ~~r~~~~~~~~-~~~i~v~GG 261 (301)
T 2vpj_A 242 TPRCYVGATVL-RGRLYAIAG 261 (301)
T ss_dssp SCCBSCEEEEE-TTEEEEECC
T ss_pred CcccceeEEEE-CCEEEEEcC
Confidence 33333444444 678999875
No 103
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=90.44 E-value=8.1 Score=33.42 Aligned_cols=185 Identities=15% Similarity=0.101 Sum_probs=92.5
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC-Ce-EEEEEcCCEEEEEc-
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG-KE-GWIVGKPAILLHTS- 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~~g~i~~S~- 189 (334)
..+.++.|.| +.+.+++++.+|.|.. ..+.++ ..... .... ...+..+.+.+ +. ++..+..+.|..-+
T Consensus 98 ~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 98 NYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPT-PRIKAELTSS-----APACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp SBEEEEEECT-TSSEEEEEESSSEEEEEECCCC---EEEEEEECS-----SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCC-cceeeecccC-----CCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 6789999987 4556666666676432 233332 21111 1111 11467788875 33 44444555443322
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEEE-ecCCCcceeeEeccccCCCeeeE
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLFL-SKGTGITEEFEEVPVQSRGFGIL 267 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~ 267 (334)
..++.-..+. + |. ..+..+.+.+++..+++ +.++.|.. ....++. ......+ ..+.
T Consensus 171 ~~~~~~~~~~------~-------~~----~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~--~~~~~~~---~~v~ 228 (337)
T 1gxr_A 171 HNQTLVRQFQ------G-------HT----DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ--LQQHDFT---SQIF 228 (337)
T ss_dssp TTTEEEEEEC------C-------CS----SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEECS---SCEE
T ss_pred CCCceeeeee------c-------cc----CceEEEEECCCCCEEEEEecCCcEEEEECCCCce--EeeecCC---CceE
Confidence 2222111111 0 11 13556777777765554 45565533 3333331 1122211 2467
Q ss_pred EEEeecCCeEEEE-eCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 268 DVGYRSQDEAWAA-GGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 268 ~v~~~~~~~~~~~-G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
.+.|.+++..+++ +.+|.+ ....+.++..+... ....+.++.+.++++.++ ++.+|.|..+
T Consensus 229 ~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 292 (337)
T 1gxr_A 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHL----HESCVLSLKFAYCGKWFVSTGKDNLLNAW 292 (337)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTSSCEEEECC----CSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcC----CccceeEEEECCCCCEEEEecCCCcEEEE
Confidence 8888776665555 446655 33444444332221 235789999987766555 5678876544
No 104
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.06 E-value=9.2 Score=33.44 Aligned_cols=184 Identities=11% Similarity=0.013 Sum_probs=94.7
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEE------------c
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVG------------K 181 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG------------~ 181 (334)
....+|++.++ ..+|++...+......+.| .++.+..... ......+++|.+++ +++|+.. .
T Consensus 54 ~~~~~i~~~~d--G~l~v~~~~~l~~~d~~~g-~~~~~~~~~~--~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~ 128 (297)
T 3g4e_A 54 APVSSVALRQS--GGYVATIGTKFCALNWKEQ-SAVVLATVDN--DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERH 128 (297)
T ss_dssp SCEEEEEEBTT--SSEEEEETTEEEEEETTTT-EEEEEEECCT--TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTT
T ss_pred CceEEEEECCC--CCEEEEECCeEEEEECCCC-cEEEEEecCC--CCCCCCCCCEEECCCCCEEEecCCcccccccccCC
Confidence 35678888863 3466655444333344444 3554432111 01123577888875 6777753 1
Q ss_pred CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEc-CCeEEEec---CCCcceeeEe
Q 036387 182 PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVR-GGGLFLSK---GTGITEEFEE 256 (334)
Q Consensus 182 ~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~-~g~i~~S~---D~G~tW~w~~ 256 (334)
.+.||+-+-.|+ -+.+... + .....+.+++++. +|++.. .+.|++-. ..|.- .-.+
T Consensus 129 ~~~l~~~d~~g~-~~~~~~~--------~---------~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~-~~~~ 189 (297)
T 3g4e_A 129 QGALYSLFPDHH-VKKYFDQ--------V---------DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI-SNRR 189 (297)
T ss_dssp CEEEEEECTTSC-EEEEEEE--------E---------SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE-EEEE
T ss_pred CcEEEEEECCCC-EEEEeec--------c---------ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc-cCcE
Confidence 246776654342 3332211 0 0112456677775 666553 45565532 23431 1111
Q ss_pred c--cccCCCeeeEEEEeecCCeEEEEeCC-CcEEE-EcCCCcCcEEcccCCCcccceeEEEEe--eCCeEEEEeC
Q 036387 257 V--PVQSRGFGILDVGYRSQDEAWAAGGS-GVLLK-TTNGGKTWIREKAADNIAANLYSVKFI--NEKKGFVLGN 325 (334)
Q Consensus 257 ~--~~~~~~~~~~~v~~~~~~~~~~~G~~-G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~--~~~~~~a~G~ 325 (334)
+ ..+.......++++..++.+|++... +.|++ ..+.|+--..+..+ .....+++|. +.+++|++..
T Consensus 190 ~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p---~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 190 SVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP---VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp EEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS---SSBEEEEEEESGGGCEEEEEEB
T ss_pred EEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC---CCCceEEEEeCCCCCEEEEEcC
Confidence 1 11111113457777777889998643 44544 45557755666552 2468889996 3467888754
No 105
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.75 E-value=9.8 Score=33.31 Aligned_cols=189 Identities=10% Similarity=0.048 Sum_probs=91.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEEEcCCEEEEE-cC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIVGKPAILLHT-SD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~~g~i~~S-~D 190 (334)
..+.+++|.| +.+.++.++.+|.|.. ..+.++.=.... .. ...+.++.+.+ +. ++.++..+.|..- .+
T Consensus 33 ~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~--~h-----~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 33 RPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLD--GH-----TGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp SCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEEC--CC-----SSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred ceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhh--hc-----CCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 5789999987 4555555566675432 223333222221 11 11477888875 43 4444555644433 23
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-C-----CeE--EEecCCCcceeeEeccc---
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-G-----GGL--FLSKGTGITEEFEEVPV--- 259 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-~-----g~i--~~S~D~G~tW~w~~~~~--- 259 (334)
.++.-..+... ..+..+.+.+++..++++. + +.+ |..........+.....
T Consensus 105 ~~~~~~~~~~~------------------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 105 NGQCVATWKSP------------------VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp TCCEEEEEECS------------------SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred CCcEEEEeecC------------------CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 33322222210 1244566777777655543 2 333 22222211111111110
Q ss_pred -----cCCCeeeEEEEeecCCeEEEE-eCCCcEEE-EcCC-CcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEE
Q 036387 260 -----QSRGFGILDVGYRSQDEAWAA-GGSGVLLK-TTNG-GKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLL 330 (334)
Q Consensus 260 -----~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~-S~Dg-G~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il 330 (334)
......+..+.+.+++..+++ +.+|.|.. .... ++.-..+.. ....+.++.|.+++..++ ++.+|.|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~ 243 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL---HEKSISDMQFSPDLTYFITSSRDTNSF 243 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC---CSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec---CCCceeEEEECCCCCEEEEecCCceEE
Confidence 001115677777766555554 45676522 2222 333333322 235789999987776555 45778766
Q ss_pred EE
Q 036387 331 QY 332 (334)
Q Consensus 331 ~s 332 (334)
.+
T Consensus 244 v~ 245 (369)
T 3zwl_B 244 LV 245 (369)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=89.60 E-value=12 Score=33.96 Aligned_cols=96 Identities=10% Similarity=0.052 Sum_probs=50.8
Q ss_pred EeeeeEeecCCEEE-EEc--CCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcE--EEEcCCCcC
Q 036387 222 IQNMGWRADGGLWL-LVR--GGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVL--LKTTNGGKT 295 (334)
Q Consensus 222 i~~~~~~~~g~~~~-~~~--~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i--~~S~DgG~t 295 (334)
+..+.|++||...+ ++. ++.|. +....++. -..+. . ...+.+++|.+++..++++.++.+ +...++...
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~--~~~~~--~-~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTE--KFEIE--T-RGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCI 210 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEE--EEEEE--C-SSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcE--EEEeC--C-CCceEEEEEccCCceEEeccceeEEEEEeccCcce
Confidence 34567888887554 332 33332 22233321 11111 1 124788999888887777665443 222232221
Q ss_pred cEEcccCCCcccceeEEEEeeCCeEEEEe
Q 036387 296 WIREKAADNIAANLYSVKFINEKKGFVLG 324 (334)
Q Consensus 296 W~~~~~~~~~~~~l~~i~~~~~~~~~a~G 324 (334)
-+.... .....+.+++|.++++.++++
T Consensus 211 ~~~~~~--~~~~~v~~v~fspdg~~l~~~ 237 (365)
T 4h5i_A 211 ARKTDF--DKNWSLSKINFIADDTVLIAA 237 (365)
T ss_dssp EEECCC--CTTEEEEEEEEEETTEEEEEE
T ss_pred eeeecC--CCCCCEEEEEEcCCCCEEEEE
Confidence 112211 223568899999988877764
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.48 E-value=12 Score=33.94 Aligned_cols=198 Identities=17% Similarity=0.196 Sum_probs=94.0
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeCC--eEEEE-EcCCEEEEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGK--EGWIV-GKPAILLHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~--~~~~v-G~~g~i~~S~ 189 (334)
..+.+++|.|.+.+.++.++.+|. ||...+++...... .+...-......+..|.+.++ ..++. +..+.|..-+
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR-EPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC-SCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC-CceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 679999998744455555556775 44444433222110 010000001124778888752 34544 4455443322
Q ss_pred -CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEEE-ecCCCcceeeEeccccCCCeee
Q 036387 190 -DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLFL-SKGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 190 -DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~ 266 (334)
..++.=..+.. . .|. ..+..+.+.+++..+++ +.++.|.. ....++. -...........+
T Consensus 161 ~~~~~~~~~~~~----~-------~~~----~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~~ 223 (402)
T 2aq5_A 161 VGTGAAVLTLGP----D-------VHP----DTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV--VAEKDRPHEGTRP 223 (402)
T ss_dssp TTTTEEEEEECT----T-------TCC----SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE--EEEEECSSCSSSC
T ss_pred CCCCCccEEEec----C-------CCC----CceEEEEECCCCCEEEEEecCCcEEEEeCCCCce--eeeeccCCCCCcc
Confidence 22221111100 0 011 13556777777765554 45555432 2233331 1111111111235
Q ss_pred EEEEeecCCeEEEEe----CCCcEE-EEcCCCcC-cEEcccCCCcccceeEEEEeeCCeEE-EEe-CCeeEEEE
Q 036387 267 LDVGYRSQDEAWAAG----GSGVLL-KTTNGGKT-WIREKAADNIAANLYSVKFINEKKGF-VLG-NDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~~~~~~~~G----~~G~i~-~S~DgG~t-W~~~~~~~~~~~~l~~i~~~~~~~~~-a~G-~~G~il~s 332 (334)
..+.|.+++..+++| .++.|. .....++. -..... .....+..+.|.+++..+ ++| .+|.|..+
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~ 295 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL--DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYF 295 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC--CCCSSCEEEEEETTTTEEEEEETTCSCEEEE
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec--cCCCceeEEEEcCCCCEEEEEEcCCCeEEEE
Confidence 677787888888887 456542 23333332 222222 123568889998766654 566 58876544
No 108
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.44 E-value=11 Score=33.52 Aligned_cols=185 Identities=13% Similarity=0.177 Sum_probs=95.1
Q ss_pred eEEEEEecCCCCEEEEEEc-CCeEEEE-cCCCcCeEeCcCCCCcccCcceeEEEEEEe-CCeEEEEEcCCEEEEEcCCCC
Q 036387 117 LLDIAFVPDDLNHGFLLGT-RQTLLET-KDGGKTWAPRSIPSAEEEDFNYRFNSISFK-GKEGWIVGKPAILLHTSDAGE 193 (334)
Q Consensus 117 l~~I~~~p~d~~~~~avG~-~g~i~~S-~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~-~~~~~~vG~~g~i~~S~DgG~ 193 (334)
..+..+.| +.+.+|+++. .+.|++- .++|+ .+....+. .+.+|.+. +++.|++...+ |++-+-.+.
T Consensus 51 ~egp~~~~-~~~~l~~~d~~~~~i~~~d~~~~~-~~~~~~~~--------~v~~i~~~~dg~l~v~~~~g-l~~~d~~~g 119 (326)
T 2ghs_A 51 GEGPTFDP-ASGTAWWFNILERELHELHLASGR-KTVHALPF--------MGSALAKISDSKQLIASDDG-LFLRDTATG 119 (326)
T ss_dssp EEEEEEET-TTTEEEEEEGGGTEEEEEETTTTE-EEEEECSS--------CEEEEEEEETTEEEEEETTE-EEEEETTTC
T ss_pred CcCCeEeC-CCCEEEEEECCCCEEEEEECCCCc-EEEEECCC--------cceEEEEeCCCeEEEEECCC-EEEEECCCC
Confidence 34567766 3466777664 3455543 34443 23222221 35667766 46777766544 555443233
Q ss_pred CeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-------CCeEEEecCCCcceeeEeccccCCCeee
Q 036387 194 SWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-------GGGLFLSKGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 194 TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-------~g~i~~S~D~G~tW~w~~~~~~~~~~~~ 266 (334)
..+.+... +... . ...+..+.+.++|.+|+.+. .+.||+-. .|+ ...+.... ...
T Consensus 120 ~~~~~~~~---~~~~----~-----~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g~---~~~~~~~~--~~~ 181 (326)
T 2ghs_A 120 VLTLHAEL---ESDL----P-----GNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KGK---VTKLFADI--SIP 181 (326)
T ss_dssp CEEEEECS---STTC----T-----TEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TTE---EEEEEEEE--SSE
T ss_pred cEEEEeeC---CCCC----C-----CCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CCc---EEEeeCCC--ccc
Confidence 46655421 1100 0 01345567778889998763 25787766 443 23221110 123
Q ss_pred EEEEeecCC-eEEEEeC-CCcEEEEc-C--CC-c-----CcEEcccCCCcccceeEEEEeeCCeEEEEe-CCeeEEEEc
Q 036387 267 LDVGYRSQD-EAWAAGG-SGVLLKTT-N--GG-K-----TWIREKAADNIAANLYSVKFINEKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 267 ~~v~~~~~~-~~~~~G~-~G~i~~S~-D--gG-~-----tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G~il~s~ 333 (334)
.++++.+++ .+|++.. .+.|++-. | .| + .+..+.. ......++.+..++++|++. ..+.|.+.+
T Consensus 182 ~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~---~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 182 NSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTG---IKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp EEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTT---SSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred CCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCC---CCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 467776555 5677654 35565443 3 45 2 1222211 12345678887788888876 345566654
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=89.41 E-value=15 Score=34.98 Aligned_cols=106 Identities=18% Similarity=0.322 Sum_probs=58.0
Q ss_pred eEeeeeEeecCCEEEEEcCC----eEEEecCCCcceeeEeccccCCCeeeEEEEeecCCe--EEEEeCCCcEEEEcCCCc
Q 036387 221 RIQNMGWRADGGLWLLVRGG----GLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE--AWAAGGSGVLLKTTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~~g----~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~S~DgG~ 294 (334)
.+..+.|.+++..++++... +..+--|.++. ...+. .....+..+.|.+++. ++.++.+|.+..- | ..
T Consensus 118 ~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~--~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vw-d-~~ 191 (615)
T 1pgu_A 118 PISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNS--LGEVS--GHSQRINACHLKQSRPMRSMTVGDDGSVVFY-Q-GP 191 (615)
T ss_dssp CEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCE--EEECC--SCSSCEEEEEECSSSSCEEEEEETTTEEEEE-E-TT
T ss_pred cEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCc--ceeee--cCCccEEEEEECCCCCcEEEEEeCCCcEEEE-e-CC
Confidence 35667888888766655432 23333344431 12221 1123578888887664 4445566765332 2 23
Q ss_pred CcEEcccCCCccc---ceeEEEEeeC-CeEEE-EeCCeeEEEE
Q 036387 295 TWIREKAADNIAA---NLYSVKFINE-KKGFV-LGNDGVLLQY 332 (334)
Q Consensus 295 tW~~~~~~~~~~~---~l~~i~~~~~-~~~~a-~G~~G~il~s 332 (334)
+.+.+..-..... .+.++.|.++ ++.++ ++.+|.|..+
T Consensus 192 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vw 234 (615)
T 1pgu_A 192 PFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 234 (615)
T ss_dssp TBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEE
T ss_pred CcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 4444433111223 6999999877 66555 5678877654
No 110
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.26 E-value=11 Score=33.01 Aligned_cols=193 Identities=12% Similarity=0.103 Sum_probs=95.4
Q ss_pred CCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcC------CeEEEEcCCCcCeEeCcC-CCCcccCcceeEEEEEEeC
Q 036387 101 LSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTR------QTLLETKDGGKTWAPRSI-PSAEEEDFNYRFNSISFKG 173 (334)
Q Consensus 101 G~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~------g~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~~I~~~~ 173 (334)
..+|+.+.....+ .....++.. .+.+|++|.. ..+++=+=.-.+|+++.. |.. .. .. .+...+
T Consensus 39 ~~~W~~~~~~p~~-r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~-~~-~~~~~~ 108 (302)
T 2xn4_A 39 EERWHQVAELPSR-RCRAGMVYM---AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDR----RS-TL-GAAVLN 108 (302)
T ss_dssp TTEEEEECCCSSC-CBSCEEEEE---TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSC----CB-SC-EEEEET
T ss_pred CCcEeEcccCCcc-cccceEEEE---CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCcc----cc-ce-EEEEEC
Confidence 4579887531111 223344443 2678888641 124443334568998752 211 11 11 233346
Q ss_pred CeEEEEEc-C-----CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC--------
Q 036387 174 KEGWIVGK-P-----AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG-------- 239 (334)
Q Consensus 174 ~~~~~vG~-~-----g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~-------- 239 (334)
+.+|++|. . ..+++-+=...+|+.+... |..... + .+. ..++.+|+.+..
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---p~~r~~---~---------~~~-~~~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM---NTRRSS---V---------GVG-VVGGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC---SSCCBS---C---------EEE-EETTEEEEECCEETTTTEEC
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC---CCcccC---c---------eEE-EECCEEEEEeCCCCCCCccc
Confidence 78888763 2 1344444456789998632 211100 0 111 235678877531
Q ss_pred CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCCcccceeEE
Q 036387 240 GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADNIAANLYSV 312 (334)
Q Consensus 240 g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~~~~~l~~i 312 (334)
..+++-.-... +|+.+. .|........+. -++.+|++|.. ..+++-.-.-.+|+.+... +....-.++
T Consensus 173 ~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-~~~r~~~~~ 247 (302)
T 2xn4_A 173 STVECYNATTN--EWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADM-NMCRRNAGV 247 (302)
T ss_dssp CCEEEEETTTT--EEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCC-SSCCBSCEE
T ss_pred cEEEEEeCCCC--cEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCC-CCccccCeE
Confidence 12333332233 356653 232211222222 26789998752 2354444445689998753 223333344
Q ss_pred EEeeCCeEEEEeC
Q 036387 313 KFINEKKGFVLGN 325 (334)
Q Consensus 313 ~~~~~~~~~a~G~ 325 (334)
... ++++|++|.
T Consensus 248 ~~~-~~~i~v~GG 259 (302)
T 2xn4_A 248 CAV-NGLLYVVGG 259 (302)
T ss_dssp EEE-TTEEEEECC
T ss_pred EEE-CCEEEEECC
Confidence 444 688999875
No 111
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.21 E-value=11 Score=33.29 Aligned_cols=195 Identities=13% Similarity=0.183 Sum_probs=97.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCC----cCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCC--EE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGG----KTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPA--IL 185 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG----~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g--~i 185 (334)
..+.+|+|.| +.+.+..++.++.|.. ..+.+ .+++.+..-..+ ...+.+|.|.+ +..++. +..+ .|
T Consensus 59 ~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h----~~~V~~v~~sp~g~~las~s~D~~v~i 133 (330)
T 2hes_X 59 KAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGH----ENEVKGVAWSNDGYYLATCSRDKSVWI 133 (330)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC--------CEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCEEEEEECC-CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCC----CCcEEEEEECCCCCEEEEEeCCCEEEE
Confidence 5789999988 4455444455665432 11111 122222110111 12477888885 444444 4445 34
Q ss_pred EEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeE--EEecCCCcceeeEecc-ccC
Q 036387 186 LHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGL--FLSKGTGITEEFEEVP-VQS 261 (334)
Q Consensus 186 ~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i--~~S~D~G~tW~w~~~~-~~~ 261 (334)
+...+.++.++.+..- .+ |. ..+..+.|.+++.+++.+ .++.| |....+ . +..+. +..
T Consensus 134 wd~~~~~~~~~~~~~~---~~-------h~----~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~--~--~~~~~~~~~ 195 (330)
T 2hes_X 134 WETDESGEEYECISVL---QE-------HS----QDVKHVIWHPSEALLASSSYDDTVRIWKDYDD--D--WECVAVLNG 195 (330)
T ss_dssp EECCTTCCCCEEEEEE---CC-------CS----SCEEEEEECSSSSEEEEEETTSCEEEEEEETT--E--EEEEEEECC
T ss_pred EeccCCCCCeEEEEEe---cc-------CC----CceEEEEECCCCCEEEEEcCCCeEEEEECCCC--C--eeEEEEccC
Confidence 4444556666655421 11 11 135567778888766654 45544 322221 1 22221 111
Q ss_pred CCeeeEEEEeecC--CeEEE-EeCCCcE--EEEcC----CCcCcEEcccCCC-cccceeEEEEeeCCeEEEEeCCeeEEE
Q 036387 262 RGFGILDVGYRSQ--DEAWA-AGGSGVL--LKTTN----GGKTWIREKAADN-IAANLYSVKFINEKKGFVLGNDGVLLQ 331 (334)
Q Consensus 262 ~~~~~~~v~~~~~--~~~~~-~G~~G~i--~~S~D----gG~tW~~~~~~~~-~~~~l~~i~~~~~~~~~a~G~~G~il~ 331 (334)
....+.++.|.++ +..++ ++.++.| |.... .-..|+....-.. -...+++++|.+++.++.++.+|.|..
T Consensus 196 h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~i 275 (330)
T 2hes_X 196 HEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAV 275 (330)
T ss_dssp CSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEE
T ss_pred CCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEE
Confidence 1225778888765 33344 4556654 33221 1234554433111 235799999987777888889997654
Q ss_pred E
Q 036387 332 Y 332 (334)
Q Consensus 332 s 332 (334)
+
T Consensus 276 w 276 (330)
T 2hes_X 276 Y 276 (330)
T ss_dssp E
T ss_pred E
Confidence 3
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.10 E-value=19 Score=35.83 Aligned_cols=188 Identities=10% Similarity=-0.006 Sum_probs=90.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEEEcCCEEEEE-cC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIVGKPAILLHT-SD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~~g~i~~S-~D 190 (334)
..+.++.|.| +.+.+..++.+|.|.. ..+.|+.=....... -.+..+.|.+ +. ++.++..+.|..- .+
T Consensus 56 ~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~ 127 (814)
T 3mkq_A 56 TPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP-------DYIRSIAVHPTKPYVLSGSDDLTVKLWNWE 127 (814)
T ss_dssp SCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEEEEEECCS-------SCEEEEEECSSSSEEEEEETTSEEEEEEGG
T ss_pred CcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEecCC-------CCEEEEEEeCCCCEEEEEcCCCEEEEEECC
Confidence 5789999998 4566666666776432 223343212221111 1477888875 43 3444455543322 22
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEE-EEcCCeEEE-ecCCCcceeeEeccccCCCeeeE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWL-LVRGGGLFL-SKGTGITEEFEEVPVQSRGFGIL 267 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~-~~~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~ 267 (334)
.+......... |. ..+..+.|.+ ++..++ .+.++.|.. ..+.+.. . ....... ...+.
T Consensus 128 ~~~~~~~~~~~------------~~----~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~-~-~~~~~~~-~~~v~ 188 (814)
T 3mkq_A 128 NNWALEQTFEG------------HE----HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-N-FTLTTGQ-ERGVN 188 (814)
T ss_dssp GTSEEEEEEEC------------CS----SCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC-S-EEEECCC-TTCCC
T ss_pred CCceEEEEEcC------------CC----CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-e-eEEecCC-CCCEE
Confidence 22222221111 10 1245567776 555444 445565533 2233321 1 1111111 12355
Q ss_pred EEEeec--CCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 268 DVGYRS--QDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 268 ~v~~~~--~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.+.+ ++..+++ +.+|.|.. ....++.-..+.. ....+..+.+.+++..+++ +.+|.|..+
T Consensus 189 ~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 189 YVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEG---HMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp EEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEEC---CSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcC---CCCCEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 666654 5555554 45665532 3233433222322 2357889999887765555 567876654
No 113
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=89.00 E-value=12 Score=33.10 Aligned_cols=170 Identities=13% Similarity=0.182 Sum_probs=84.6
Q ss_pred EEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcC------------CEEEEEcCCCCCeE
Q 036387 129 HGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKP------------AILLHTSDAGESWE 196 (334)
Q Consensus 129 ~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~------------g~i~~S~DgG~TW~ 196 (334)
.++++|... ++.=+-...+|+....|.... . .-.++...++.+|+.|.. ..+++-+-.-.+|+
T Consensus 6 ~l~~~GG~~-~~~yd~~~~~W~~~~~~~p~~--r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 6 LIFMISEEG-AVAYDPAANECYCASLSSQVP--K--NHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEEETTE-EEEEETTTTEEEEEECCCCSC--S--SEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEEcCCc-eEEECCCCCeEecCCCCCCCC--c--cceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 455666533 333333456798754443211 1 112333346778877541 12455454567898
Q ss_pred EeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC---------CeEEEecCCCcceeeEecc-ccCCCeee
Q 036387 197 RIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG---------GGLFLSKGTGITEEFEEVP-VQSRGFGI 266 (334)
Q Consensus 197 ~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~---------g~i~~S~D~G~tW~w~~~~-~~~~~~~~ 266 (334)
.++. +|..... | .+ ..-++.+|+.+.. ..+++-.-... +|+.++ .|......
T Consensus 81 ~~~~---~p~~r~~---~---------~~-~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~ 142 (315)
T 4asc_A 81 GMPP---LPSPRCL---F---------GL-GEALNSIYVVGGREIKDGERCLDSVMCYDRLSF--KWGESDPLPYVVYGH 142 (315)
T ss_dssp ECCC---BSSCEES---C---------EE-EEETTEEEEECCEESSTTCCBCCCEEEEETTTT--EEEECCCCSSCCBSC
T ss_pred ECCC---CCcchhc---e---------eE-EEECCEEEEEeCCcCCCCCcccceEEEECCCCC--cEeECCCCCCcccce
Confidence 8753 2211100 0 11 1235678877641 12444333333 456653 33221222
Q ss_pred EEEEeecCCeEEEEeCC-------CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 267 LDVGYRSQDEAWAAGGS-------GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 267 ~~v~~~~~~~~~~~G~~-------G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
..+. .++.+|++|.. ..+++-.-.-.+|+.+... +......++... ++++|++|.
T Consensus 143 ~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~iyv~GG 204 (315)
T 4asc_A 143 TVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM-QTARSLFGATVH-DGRIIVAAG 204 (315)
T ss_dssp EEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEEE-TTEEEEEEE
T ss_pred eEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC-CCchhceEEEEE-CCEEEEEec
Confidence 2222 36789998764 2455544445689998753 333344444444 678998874
No 114
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=88.32 E-value=6.1 Score=36.09 Aligned_cols=109 Identities=16% Similarity=0.197 Sum_probs=63.9
Q ss_pred eeeEeecCCEEEEEcCCeEEEecCCCcceeeEecccc-CCCeeeEEEEeecC----CeEEEEeCC------CcEEEEcCC
Q 036387 224 NMGWRADGGLWLLVRGGGLFLSKGTGITEEFEEVPVQ-SRGFGILDVGYRSQ----DEAWAAGGS------GVLLKTTNG 292 (334)
Q Consensus 224 ~~~~~~~g~~~~~~~~g~i~~S~D~G~tW~w~~~~~~-~~~~~~~~v~~~~~----~~~~~~G~~------G~i~~S~Dg 292 (334)
.+.+.++|.+|++...+.|++-.| |+.-....++.. .......+|++.++ +.+|++-.. ..|++-++.
T Consensus 35 ~ia~~pdG~l~V~e~~g~I~~i~~-g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 35 ALAFLPDGGMLIAERPGRIRLFRE-GRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EEEECTTSCEEEEETTTEEEEEET-TEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEEEcCCCeEEEEeCCCeEEEEEC-CCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 466778899999888888887764 431012222211 11235788888765 688887431 556665544
Q ss_pred CcCc---EEccc--C--CCcccceeEEEEeeCCeEEEEe-C-------------CeeEEEEc
Q 036387 293 GKTW---IREKA--A--DNIAANLYSVKFINEKKGFVLG-N-------------DGVLLQYL 333 (334)
Q Consensus 293 G~tW---~~~~~--~--~~~~~~l~~i~~~~~~~~~a~G-~-------------~G~il~s~ 333 (334)
+.+. +.+-. + .........|+|.+++.+|++- + .|.|+|.+
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~ 175 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLT 175 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEEC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEc
Confidence 4333 22211 1 0111234688998899999873 2 27788864
No 115
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.25 E-value=13 Score=32.70 Aligned_cols=55 Identities=16% Similarity=0.265 Sum_probs=31.4
Q ss_pred EEEE-eCCCc--EEEEcCCCcCcEEcccCCCcccceeEEEEeeCC-----eEEEEeCCeeEEEE
Q 036387 277 AWAA-GGSGV--LLKTTNGGKTWIREKAADNIAANLYSVKFINEK-----KGFVLGNDGVLLQY 332 (334)
Q Consensus 277 ~~~~-G~~G~--i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~-----~~~a~G~~G~il~s 332 (334)
.+++ +.++. +|.. +.+..|+.+..-..-...+.+++|.+++ .+..++.+|.|..+
T Consensus 181 ~l~sgs~D~~v~lWd~-~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw 243 (316)
T 3bg1_A 181 RFASGGCDNLIKLWKE-EEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIW 243 (316)
T ss_dssp BEECCBTTSBCCEEEE-CTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEE
T ss_pred eEEEecCCCeEEEEEe-CCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEE
Confidence 4444 34554 3433 3355676654421223568999998753 45556788887654
No 116
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=88.12 E-value=14 Score=33.03 Aligned_cols=194 Identities=7% Similarity=-0.022 Sum_probs=95.8
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-C-eEEEE-EcCCEEEEEcC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-K-EGWIV-GKPAILLHTSD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~-~~~~v-G~~g~i~~S~D 190 (334)
..+.+++|.|++++.++.++.+|.|.. ..+.++.=....... . ...+.++.|.+ + ..++. +..+.|..-+=
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-h----~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 148 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMG-P----GDAITGMKFNQFNTNQLFVSSIRGATTLRDF 148 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCS-T----TCBEEEEEEETTEEEEEEEEETTTEEEEEET
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCC-c----CCceeEEEeCCCCCCEEEEEeCCCEEEEEEC
Confidence 578999998743245555555665432 333333222221111 1 12578888886 3 34444 45565544433
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEEecCCCcceeeEeccccCCCeeeEEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFLSKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
.++....+.... + + ...+..+.+.+++..++++ .++.|..-.=.++. ...+... ...+.++
T Consensus 149 ~~~~~~~~~~~~---~-------~----~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~h--~~~v~~~ 210 (383)
T 3ei3_B 149 SGSVIQVFAKTD---S-------W----DYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHE--IFKEKLH--KAKVTHA 210 (383)
T ss_dssp TSCEEEEEECCC---C-------S----SCCEEEEEEETTTTEEEEEETTSEEEEEETTSCE--EEEEECS--SSCEEEE
T ss_pred CCCceEEEeccC---C-------C----CCCeEEEEECCCCCEEEEECCCCCEEEEECCCCE--EEEeccC--CCcEEEE
Confidence 344444443211 0 0 0135567777887765554 45554322212321 1221111 1257888
Q ss_pred EeecCCe-EEE-EeCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEee-CCeEEE-EeCCeeEEEE
Q 036387 270 GYRSQDE-AWA-AGGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFIN-EKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 270 ~~~~~~~-~~~-~G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~-~~~~~a-~G~~G~il~s 332 (334)
+|.+++. .++ ++.++.| |-.......-+.+... .....+.++.|.+ ++..++ ++.+|.|..+
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iw 278 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVY 278 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEE
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEE
Confidence 8887665 444 4556755 3222211111222111 1235789999987 666555 4567777654
No 117
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.90 E-value=24 Score=35.45 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=86.5
Q ss_pred CEEEEEEcCC-----eEEEEcCCCcCeEeCcCCC--C-cccCcceeEEEEEEe-CCeEEEEEcC-------CEEEEEcCC
Q 036387 128 NHGFLLGTRQ-----TLLETKDGGKTWAPRSIPS--A-EEEDFNYRFNSISFK-GKEGWIVGKP-------AILLHTSDA 191 (334)
Q Consensus 128 ~~~~avG~~g-----~i~~S~DgG~TW~~~~~p~--~-~~~~~~~~~~~I~~~-~~~~~~vG~~-------g~i~~S~Dg 191 (334)
+.+|++|..+ .++.-.-.-.+|+.+..+. . .+... .....+.+. ++.+|++|.. ..+++-+-.
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R-~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVAR-MCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCC-BSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccc-cceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 5678776532 2333222345799876221 0 01111 122233333 7788888631 234444444
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCC---eEEEecCCCcceeeEecc----ccCCCe
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGG---GLFLSKGTGITEEFEEVP----VQSRGF 264 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g---~i~~S~D~G~tW~w~~~~----~~~~~~ 264 (334)
-.+|+.+.. +|... + .| .+....++.+|+.+... .+++-.-.-. +|+.+. .|....
T Consensus 477 t~~W~~~~~---~p~~R-~--~h---------~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 477 TREWSMIKS---LSHTR-F--RH---------SACSLPDGNVLILGGVTEGPAMLLYNVTEE--IFKDVTPKDEFFQNSL 539 (695)
T ss_dssp TTEEEECCC---CSBCC-B--SC---------EEEECTTSCEEEECCBCSSCSEEEEETTTT--EEEECCCSSGGGGSCC
T ss_pred CCcEEECCC---CCCCc-c--cc---------eEEEEcCCEEEEECCCCCCCCEEEEECCCC--ceEEccCCCCCCCccc
Confidence 568999863 22111 1 01 11222367888886421 3444333333 456654 232212
Q ss_pred eeEEEEeecC-CeEEEEeCC--------CcEEEEcCCCcC------cEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 265 GILDVGYRSQ-DEAWAAGGS--------GVLLKTTNGGKT------WIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 265 ~~~~v~~~~~-~~~~~~G~~--------G~i~~S~DgG~t------W~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
...++.+... +.+|++|+. ..+++-.=.-.+ |+.+....+....-.++...+++++|++|.
T Consensus 540 ~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG 615 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGG 615 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECC
T ss_pred ceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECC
Confidence 2223444433 789998763 124332222334 888865212233334455555589999876
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=87.73 E-value=14 Score=32.63 Aligned_cols=104 Identities=13% Similarity=0.181 Sum_probs=55.4
Q ss_pred EeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEE-EcCCCcCcE
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLK-TTNGGKTWI 297 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~-S~DgG~tW~ 297 (334)
+..+.+.+++..++++ .++.|. +....++. ...+ ......+.+++|.+++..+++|. +|.|.. ....++.=.
T Consensus 167 v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~--~~~~--~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~ 242 (321)
T 3ow8_A 167 ILSIAYSPDGKYLASGAIDGIINIFDIATGKL--LHTL--EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAG 242 (321)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEE--CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcE--EEEE--cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeE
Confidence 4557778888766654 445442 22233331 1111 11122567888887777666554 565522 223232211
Q ss_pred EcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 298 REKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
.+. .-...+.+++|.++++.++ ++.+|.|..+
T Consensus 243 ~~~---~h~~~v~~~~~sp~~~~l~s~s~D~~v~iw 275 (321)
T 3ow8_A 243 TLS---GHASWVLNVAFCPDDTHFVSSSSDKSVKVW 275 (321)
T ss_dssp EEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEc---CCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 221 1235689999987766554 5678876544
No 119
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.43 E-value=6.9 Score=37.33 Aligned_cols=100 Identities=14% Similarity=0.229 Sum_probs=58.0
Q ss_pred eeeEeecCCEEEEEcCC-eEEEecC-CCcceeeEeccc----cCCCeeeEEEEeec----CCeEEEEeC-----------
Q 036387 224 NMGWRADGGLWLLVRGG-GLFLSKG-TGITEEFEEVPV----QSRGFGILDVGYRS----QDEAWAAGG----------- 282 (334)
Q Consensus 224 ~~~~~~~g~~~~~~~~g-~i~~S~D-~G~tW~w~~~~~----~~~~~~~~~v~~~~----~~~~~~~G~----------- 282 (334)
.+.+.++|++|++...+ .|++-.+ +|+.=....++. +....++++|++.+ ++.+|++-.
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~ 110 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKEL 110 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCS
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccc
Confidence 46778899999988776 5887665 354211222221 11234688999876 578888642
Q ss_pred --CCcEEEEcCCC-----cCcEEccc--CCCcccceeEEEEeeCCeEEEE
Q 036387 283 --SGVLLKTTNGG-----KTWIREKA--ADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 283 --~G~i~~S~DgG-----~tW~~~~~--~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
...|+|-++.+ .+.+.+-. +......-..|+|.+++.+|++
T Consensus 111 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 111 PNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred ccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 13565554322 12333321 1111234678999889999886
No 120
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.36 E-value=16 Score=32.85 Aligned_cols=190 Identities=9% Similarity=0.099 Sum_probs=89.8
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEEEEEc-
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAILLHTS- 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i~~S~- 189 (334)
..+.+++|.|+ +.+++++.+|.| |-...+............+ .-.+++|.|.+ +..++. +..+.|..-+
T Consensus 83 ~~v~~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H----~~~V~~v~~spdg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 83 AGVADLTWVGE--RGILVASDSGAVELWELDENETLIVSKFCKYEH----DDIVSTVSVLSSGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp SCEEEEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEEEEEECC----SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCEEEEEEeCC--CeEEEEECCCEEEEEeccCCCceeEeeccccCC----CCCEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 35889999873 566666677764 4333322221111100011 11478888885 444444 4445332221
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC-CEEEE-EcCCeEE-EecCCCcceeeEeccccCCCeee
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG-GLWLL-VRGGGLF-LSKGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g-~~~~~-~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~ 266 (334)
..| +.+.. +. .|. ..+..+.|.+++ .+++. +.++.|. +....++. ...+........+
T Consensus 157 ~~~---~~~~~---~~-------~h~----~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~~~~ 217 (344)
T 4gqb_B 157 AQQ---VVLSS---YR-------AHA----AQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP--ASQIGCSAPGYLP 217 (344)
T ss_dssp TTT---EEEEE---EC-------CCS----SCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC--EEECC----CCCE
T ss_pred CCC---cEEEE---Ec-------CcC----CceEEEEecCCCCCceeeeccccccccccccccce--eeeeecceeeccc
Confidence 112 22211 11 111 135566776666 35544 4455543 22233331 1222222222346
Q ss_pred EEEEeec-CCeEEEEe-CCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCC-eEEE-EeCCeeEEEE
Q 036387 267 LDVGYRS-QDEAWAAG-GSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEK-KGFV-LGNDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~-~~~~~~~G-~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~-~~~a-~G~~G~il~s 332 (334)
.++.|.+ ++.++++| .+|.|.. -...++--..+.. -...+.+|+|.+++ ++++ ++.+|.|.-+
T Consensus 218 ~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~---h~~~v~~v~fsp~g~~~lasgs~D~~i~vw 285 (344)
T 4gqb_B 218 TSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV---HSQCVTGLVFSPHSVPFLASLSEDCSLAVL 285 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC---CSSCEEEEEECSSSSCCEEEEETTSCEEEE
T ss_pred eeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC---CCCCEEEEEEccCCCeEEEEEeCCCeEEEE
Confidence 7788765 34566654 5676522 2233333333322 23578999998765 4555 5678877654
No 121
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=86.96 E-value=34 Score=36.19 Aligned_cols=186 Identities=10% Similarity=0.032 Sum_probs=90.6
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEcCCEEEEE-cCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGKPAILLHT-SDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~g~i~~S-~Dg 191 (334)
..+.+++|.| |.+.++.++.+|.|.. ....|+ .... .. . ...+..+.+.+ ..++.++..+.|..- ...
T Consensus 1004 ~~v~~l~~s~-dg~~l~s~~~dg~i~vwd~~~~~-~~~~--~~-~----~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~ 1074 (1249)
T 3sfz_A 1004 KAVRHIQFTA-DGKTLISSSEDSVIQVWNWQTGD-YVFL--QA-H----QETVKDFRLLQDSRLLSWSFDGTVKVWNVIT 1074 (1249)
T ss_dssp SCCCCEEECS-SSSCEEEECSSSBEEEEETTTTE-EECC--BC-C----SSCEEEEEECSSSEEEEEESSSEEEEEETTT
T ss_pred CceEEEEECC-CCCEEEEEcCCCEEEEEECCCCc-eEEE--ec-C----CCcEEEEEEcCCCcEEEEECCCcEEEEECCC
Confidence 5688899987 4455555566676432 222232 1111 11 1 12467777775 555555555544332 122
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeE-EEecCCCcceeeEeccccCCCeeeEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGL-FLSKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i-~~S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
|+.-..+. .|. ..+..+.+.+++..++++ .++.| ++..+.+.. ... +......+.++
T Consensus 1075 ~~~~~~~~-------------~~~----~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~~--~~~--l~~h~~~v~~~ 1133 (1249)
T 3sfz_A 1075 GRIERDFT-------------CHQ----GTVLSCAISSDATKFSSTSADKTAKIWSFDLLSP--LHE--LKGHNGCVRCS 1133 (1249)
T ss_dssp TCCCEEEE-------------CCS----SCCCCEEECSSSSSCEEECCSSCCCEECSSSSSC--SBC--CCCCSSCEEEE
T ss_pred CceeEEEc-------------ccC----CcEEEEEECCCCCEEEEEcCCCcEEEEECCCcce--eee--eccCCCcEEEE
Confidence 22111111 111 124456677777655544 34433 122222221 011 11112357888
Q ss_pred EeecCCeEEEEe-CCCcE--EEEcCCCcCcEEccc------CCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 270 GYRSQDEAWAAG-GSGVL--LKTTNGGKTWIREKA------ADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 270 ~~~~~~~~~~~G-~~G~i--~~S~DgG~tW~~~~~------~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
+|.+++..+++| .+|.| |... .|+--..+.. .......+.+++|.++++.++++. |.|..+
T Consensus 1134 ~~s~dg~~lat~~~dg~i~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~-g~v~vw 1203 (1249)
T 3sfz_A 1134 AFSLDGILLATGDDNGEIRIWNVS-DGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG-GYLKWW 1203 (1249)
T ss_dssp EECSSSSEEEEEETTSCCCEEESS-SSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES-SSEEEB
T ss_pred EECCCCCEEEEEeCCCEEEEEECC-CCceEEEeccccccccccccCceEEEEEECCCCCEEEECC-CeEEEE
Confidence 998877666654 45643 4333 3332222100 001235688999999888888776 655543
No 122
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=86.95 E-value=18 Score=38.32 Aligned_cols=185 Identities=10% Similarity=0.036 Sum_probs=88.4
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEE-EEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEEcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLL-ETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHTSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~-~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S~Dg 191 (334)
..+..+++.| +.+.+.+.+.+|.|. .....++......... ..+.++.|.+ +..++ ++..+.|..-+=.
T Consensus 962 ~~i~~~~~sp-~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~-------~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 962 AQVSCCCLSP-HLEYVAFGDEDGAIKIIELPNNRVFSSGVGHK-------KAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCCEEEETTTTSCEEECCCCS-------SCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCCEEEEEcCCCceeeecccCC-------CceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 3577888887 445444444555432 2333344333322111 1366778875 34343 4445544332211
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEE-EecCCCcceeeEeccccCCCeeeEEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
.. +.+.. ..+ ...+..+.+.+++.++..+.++.+. +....|+. ....... ...+.+++
T Consensus 1034 ~~--~~~~~-----------~~~----~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~--~~~~~~~--~~~v~~~~ 1092 (1249)
T 3sfz_A 1034 TG--DYVFL-----------QAH----QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI--ERDFTCH--QGTVLSCA 1092 (1249)
T ss_dssp TT--EEECC-----------BCC----SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCC--CEEEECC--SSCCCCEE
T ss_pred CC--ceEEE-----------ecC----CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCce--eEEEccc--CCcEEEEE
Confidence 11 11110 011 1134556666767776666666653 23333331 1111111 12456777
Q ss_pred eecCCeEEEEe-CCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEE
Q 036387 271 YRSQDEAWAAG-GSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQ 331 (334)
Q Consensus 271 ~~~~~~~~~~G-~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~ 331 (334)
|.+++..++++ .+|.+ +...+.++.-..+. .-...+.+++|.++++.+++ +.+|.|.-
T Consensus 1093 ~s~d~~~l~s~s~d~~v~iwd~~~~~~~~~l~---~h~~~v~~~~~s~dg~~lat~~~dg~i~v 1153 (1249)
T 3sfz_A 1093 ISSDATKFSSTSADKTAKIWSFDLLSPLHELK---GHNGCVRCSAFSLDGILLATGDDNGEIRI 1153 (1249)
T ss_dssp ECSSSSSCEEECCSSCCCEECSSSSSCSBCCC---CCSSCEEEEEECSSSSEEEEEETTSCCCE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCcceeeeec---cCCCcEEEEEECCCCCEEEEEeCCCEEEE
Confidence 77766655554 45644 22333333222222 12357899999988877665 46776543
No 123
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.27 E-value=17 Score=31.94 Aligned_cols=170 Identities=14% Similarity=0.069 Sum_probs=85.7
Q ss_pred CEEEEEEcC-----CeEEEEcCCCcCeEeCcC-CCCcccCcceeEEEEEEeCCeEEEEEcC----------CEEEEEcCC
Q 036387 128 NHGFLLGTR-----QTLLETKDGGKTWAPRSI-PSAEEEDFNYRFNSISFKGKEGWIVGKP----------AILLHTSDA 191 (334)
Q Consensus 128 ~~~~avG~~-----g~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~~I~~~~~~~~~vG~~----------g~i~~S~Dg 191 (334)
+.+|++|.. ..++.=+-.-.+|+++.. |.. ...+ ++...++.+|+.|.. ..+++-+-.
T Consensus 25 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~----r~~~--~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~ 98 (308)
T 1zgk_A 25 RLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVP----RSGL--AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPM 98 (308)
T ss_dssp CCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSC----CBSC--EEEEETTEEEEECCEEEETTEEEECCCEEEEETT
T ss_pred CEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcc----cccc--eEEEECCEEEEECCCcCCCCCCeecceEEEECCC
Confidence 566776641 124433444567998742 221 1111 233447788887542 234554545
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC------CeEEEecCCCcceeeEecc-ccCCCe
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG------GGLFLSKGTGITEEFEEVP-VQSRGF 264 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~------g~i~~S~D~G~tW~w~~~~-~~~~~~ 264 (334)
..+|+.++.. +..... + .+. ..++.+|+.+.. ..+++-.-... +|+.++ .|....
T Consensus 99 ~~~W~~~~~~---p~~r~~---~---------~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~ 160 (308)
T 1zgk_A 99 TNQWSPCAPM---SVPRNR---I---------GVG-VIDGHIYAVGGSHGCIHHNSVERYEPERD--EWHLVAPMLTRRI 160 (308)
T ss_dssp TTEEEECCCC---SSCCBT---C---------EEE-EETTEEEEECCEETTEECCCEEEEETTTT--EEEECCCCSSCCB
T ss_pred CCeEeECCCC---CcCccc---c---------EEE-EECCEEEEEcCCCCCcccccEEEECCCCC--eEeECCCCCcccc
Confidence 6789988632 211110 0 111 236778887531 22333332233 456653 232211
Q ss_pred eeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 265 GILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
....+.+ ++.+|++|.. ..+++-.-.-.+|+.+... +......++... ++++|++|.
T Consensus 161 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~iyv~GG 223 (308)
T 1zgk_A 161 GVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAM-NTIRSGAGVCVL-HNCIYAAGG 223 (308)
T ss_dssp SCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCC-SSCCBSCEEEEE-TTEEEEECC
T ss_pred ceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCC-CCccccceEEEE-CCEEEEEeC
Confidence 2222222 6789998752 2344444445689998753 333344444444 688999985
No 124
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=85.66 E-value=18 Score=31.81 Aligned_cols=170 Identities=12% Similarity=0.235 Sum_probs=83.7
Q ss_pred EEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcC-----C-------EEEEEcCCCCCeE
Q 036387 129 HGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKP-----A-------ILLHTSDAGESWE 196 (334)
Q Consensus 129 ~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~-----g-------~i~~S~DgG~TW~ 196 (334)
.++++|....... +=.-.+|+....+...+ . ...++...++.+|+.|.. + .+++-+-...+|+
T Consensus 17 ~i~~~GG~~~~~y-d~~~~~W~~~~~~~~~~--r--~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 91 (318)
T 2woz_A 17 LILLVNDTAAVAY-DPMENECYLTALAEQIP--R--NHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWV 91 (318)
T ss_dssp EEEEECSSEEEEE-ETTTTEEEEEEECTTSC--S--SEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEE
T ss_pred hhhhccccceEEE-CCCCCceecccCCccCC--c--cceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEE
Confidence 4566665433222 22345698754432111 1 122333446778887641 1 1555555677899
Q ss_pred EeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC----C----eEEEecCCCcceeeEecc-ccCCCeeeE
Q 036387 197 RIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG----G----GLFLSKGTGITEEFEEVP-VQSRGFGIL 267 (334)
Q Consensus 197 ~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~----g----~i~~S~D~G~tW~w~~~~-~~~~~~~~~ 267 (334)
.++. +|..... | .+. ..++.+|+.+.. . .+++-.-... +|+.++ .|.......
T Consensus 92 ~~~~---~p~~r~~---~---------~~~-~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~ 153 (318)
T 2woz_A 92 GLPP---LPSARCL---F---------GLG-EVDDKIYVVAGKDLQTEASLDSVLCYDPVAA--KWSEVKNLPIKVYGHN 153 (318)
T ss_dssp ECSC---BSSCBCS---C---------EEE-EETTEEEEEEEEBTTTCCEEEEEEEEETTTT--EEEEECCCSSCEESCE
T ss_pred ECCC---CCccccc---c---------ceE-EECCEEEEEcCccCCCCcccceEEEEeCCCC--CEeECCCCCCcccccE
Confidence 8753 2221110 0 111 235678887642 1 2333332333 456653 332211222
Q ss_pred EEEeecCCeEEEEeCC-------CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 268 DVGYRSQDEAWAAGGS-------GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 268 ~v~~~~~~~~~~~G~~-------G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
.+. .++.+|++|.. ..+++-.-.-++|+.+... +......++... ++++|++|.
T Consensus 154 ~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~iyv~GG 214 (318)
T 2woz_A 154 VIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM-KTPRSMFGVAIH-KGKIVIAGG 214 (318)
T ss_dssp EEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEEE-TTEEEEEEE
T ss_pred EEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC-CCCcccceEEEE-CCEEEEEcC
Confidence 222 36789998752 2354444445689998753 333333444444 678999874
No 125
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=84.99 E-value=22 Score=32.23 Aligned_cols=110 Identities=12% Similarity=0.122 Sum_probs=59.5
Q ss_pred eEeeeeEeecCCEEEEEcCCeEEE-ecC-CCcceeeEec-----cccCCCeeeEEEEeecCC-eEEE-EeCCCcE-EEEc
Q 036387 221 RIQNMGWRADGGLWLLVRGGGLFL-SKG-TGITEEFEEV-----PVQSRGFGILDVGYRSQD-EAWA-AGGSGVL-LKTT 290 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~~g~i~~-S~D-~G~tW~w~~~-----~~~~~~~~~~~v~~~~~~-~~~~-~G~~G~i-~~S~ 290 (334)
.+..+.+.+++..++.+.++.|.. ..+ .++. ...+ ........+.+++|.+++ ..++ ++.+|.| +...
T Consensus 179 ~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 256 (447)
T 3dw8_B 179 HINSISINSDYETYLSADDLRINLWHLEITDRS--FNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDM 256 (447)
T ss_dssp CCCEEEECTTSSEEEEECSSEEEEEETTEEEEE--EEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred ceEEEEEcCCCCEEEEeCCCeEEEEECCCCCce--eeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEEC
Confidence 355677788888777776665432 222 2221 1211 111112357889988765 4544 4556765 2233
Q ss_pred CCCcC----cEEcccCCCc---------ccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 291 NGGKT----WIREKAADNI---------AANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 291 DgG~t----W~~~~~~~~~---------~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
..++. -+.+...... ...+.+++|.++++.++++..|.|.-+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iw 311 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVW 311 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEE
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEE
Confidence 34443 2333221000 027999999998888887766776644
No 126
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.93 E-value=27 Score=33.15 Aligned_cols=105 Identities=9% Similarity=0.043 Sum_probs=62.0
Q ss_pred eEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccC-CCeeeEEEEeec----------CCeEEEEe-CCCcE
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQS-RGFGILDVGYRS----------QDEAWAAG-GSGVL 286 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~-~~~~~~~v~~~~----------~~~~~~~G-~~G~i 286 (334)
.+..+.+.+++..++++ .++.|. +..+.++. ... ... ....+.+++|.+ ++..++++ .+|.|
T Consensus 490 ~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~--~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i 565 (615)
T 1pgu_A 490 KPSYISISPSETYIAAGDVMGKILLYDLQSREV--KTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI 565 (615)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEC--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE
T ss_pred ceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcc--eeE--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE
Confidence 35667888888866655 455543 34344431 111 111 223678899887 66666654 46655
Q ss_pred -EEEcCCC-cCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 287 -LKTTNGG-KTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 287 -~~S~DgG-~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
+...+.+ +--+.+.. -...+.+++|.++++++.++.+|.|..+
T Consensus 566 ~iw~~~~~~~~~~~~~~---h~~~v~~l~~s~~~~l~s~~~d~~v~iw 610 (615)
T 1pgu_A 566 FIYSVKRPMKIIKALNA---HKDGVNNLLWETPSTLVSSGADACIKRW 610 (615)
T ss_dssp EEEESSCTTCCEEETTS---STTCEEEEEEEETTEEEEEETTSCEEEE
T ss_pred EEEECCCCceechhhhc---CccceEEEEEcCCCCeEEecCCceEEEE
Confidence 2333433 44444432 2467999999998886667888877643
No 127
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=84.92 E-value=20 Score=31.70 Aligned_cols=190 Identities=12% Similarity=0.078 Sum_probs=91.2
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeCC-----------eEEEE-Ec
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGK-----------EGWIV-GK 181 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~-----------~~~~v-G~ 181 (334)
..+.+++|.| +.+.++.++.++.|.. ...+... ......... ...+..+.+.+. ..++. +.
T Consensus 119 ~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~ 192 (343)
T 2xzm_R 119 SEVYSVAFSP-DNRQILSAGAEREIKLWNILGECK-FSSAEKENH----SDWVSCVRYSPIMKSANKVQPFAPYFASVGW 192 (343)
T ss_dssp SCEEEEEECS-STTEEEEEETTSCEEEEESSSCEE-EECCTTTSC----SSCEEEEEECCCCCSCSCCCSSCCEEEEEET
T ss_pred CcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCce-eeeecccCC----CceeeeeeeccccccccccCCCCCEEEEEcC
Confidence 5789999988 5566666677776433 2222111 111110011 114677777642 23443 44
Q ss_pred CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEE--ecCCCcceeeEecc
Q 036387 182 PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFL--SKGTGITEEFEEVP 258 (334)
Q Consensus 182 ~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~--S~D~G~tW~w~~~~ 258 (334)
.+.|..-+. +.+.+.. +..|. ..+..+.|.+++..++.+ .++.|.. ....+.. .....
T Consensus 193 d~~i~iwd~---~~~~~~~----------~~~h~----~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~--~~~~~ 253 (343)
T 2xzm_R 193 DGRLKVWNT---NFQIRYT----------FKAHE----SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP--QREFD 253 (343)
T ss_dssp TSEEEEEET---TTEEEEE----------EECCS----SCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC--SEEEE
T ss_pred CCEEEEEcC---CCceeEE----------EcCcc----ccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc--ceeec
Confidence 554433221 1122110 01111 135667788888766654 4554432 2122211 01111
Q ss_pred ccCCCeeeEEEEeecCCeEEEEeCCCcEE-EEcCCCcCcE--EcccC--------CCcccceeEEEEeeCCeEEE-EeCC
Q 036387 259 VQSRGFGILDVGYRSQDEAWAAGGSGVLL-KTTNGGKTWI--REKAA--------DNIAANLYSVKFINEKKGFV-LGND 326 (334)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~~~~~G~~G~i~-~S~DgG~tW~--~~~~~--------~~~~~~l~~i~~~~~~~~~a-~G~~ 326 (334)
. ...+..++|.+++..+++|.++.+. .....++.-. .+... ......+.+++|.+++..++ ++.+
T Consensus 254 --~-~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 254 --A-GSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp --C-SSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred --C-CCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 1 1257889998877777777665442 2222222111 11100 01124588999988766554 5688
Q ss_pred eeEEEE
Q 036387 327 GVLLQY 332 (334)
Q Consensus 327 G~il~s 332 (334)
|.|..+
T Consensus 331 g~v~~w 336 (343)
T 2xzm_R 331 GVIRTF 336 (343)
T ss_dssp SEEEEE
T ss_pred ceEEEE
Confidence 887543
No 128
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=84.59 E-value=20 Score=31.48 Aligned_cols=139 Identities=14% Similarity=0.006 Sum_probs=68.6
Q ss_pred EEEEEEeC--CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEEEEcC---
Q 036387 166 FNSISFKG--KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWLLVRG--- 239 (334)
Q Consensus 166 ~~~I~~~~--~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~~~--- 239 (334)
...|.+++ +++|++.....|++=+-.+...+.+... ..+. .+ .....+.+.+ +|.+|++...
T Consensus 82 p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~--~~~~-~~---------~~p~~i~~d~~~G~l~v~d~~~~~ 149 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATS--VDGV-PF---------KWLYAVTVDQRTGIVYFTDVSTLY 149 (322)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESE--ETTE-EC---------SCEEEEEECTTTCCEEEEESCSSC
T ss_pred CceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEeccc--CCCC-cc---------cccceEEEecCCCEEEEECCcccc
Confidence 46777873 6788875555555543233334444321 0110 00 0133466677 8889987643
Q ss_pred ---------------CeEEEecC-CCcceeeEeccccCCCeeeEEEEeecCC-eEEEEeC-CCcEEEE-cCCC--cCcEE
Q 036387 240 ---------------GGLFLSKG-TGITEEFEEVPVQSRGFGILDVGYRSQD-EAWAAGG-SGVLLKT-TNGG--KTWIR 298 (334)
Q Consensus 240 ---------------g~i~~S~D-~G~tW~w~~~~~~~~~~~~~~v~~~~~~-~~~~~G~-~G~i~~S-~DgG--~tW~~ 298 (334)
+.|++-.. .++ ........ ....++++.+++ .+|++-. .+.|++- .+++ .+.+.
T Consensus 150 ~~~~~~~~~~~~~~~g~v~~~d~~~~~---~~~~~~~~--~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~ 224 (322)
T 2fp8_A 150 DDRGVQQIMDTSDKTGRLIKYDPSTKE---TTLLLKEL--HVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV 224 (322)
T ss_dssp CTTCHHHHHHHTCCCEEEEEEETTTTE---EEEEEEEE--SCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE
T ss_pred cccccceehcccCCCceEEEEeCCCCE---EEEeccCC--ccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce
Confidence 55665443 332 12111000 012356666654 4777633 3555443 3432 12333
Q ss_pred cccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 299 EKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 299 ~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
+... .. ...|++..++++|++..
T Consensus 225 ~~~~---~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 225 LVKI---PN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEC---SS-EEEEEECTTSCEEEEEE
T ss_pred EEeC---CC-CCCeEECCCCCEEEEec
Confidence 3221 12 56677777888888754
No 129
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=84.47 E-value=20 Score=31.34 Aligned_cols=200 Identities=10% Similarity=0.130 Sum_probs=108.9
Q ss_pred eeeEEEEEecCCCCEEEEEEc-CCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEc-CCEEE--EE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGT-RQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGK-PAILL--HT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~-~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~-~g~i~--~S 188 (334)
..+.+|++.| +.+++|++.. .+.|++ +.+ |+-+..+.+.... ...+|++.+ ++.+++-+ .+.++ ..
T Consensus 27 ~~lSGla~~~-~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~------D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 27 NNISSLTWSA-QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVK------DLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp SCEEEEEEET-TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCS------SEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred cCcceeEEeC-CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCC------ChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 4699999997 4689999865 455544 555 8878777554322 356777765 55555543 23343 44
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC-CEEEEEcCC--eEEEecCCCc--ceeeEeccc----
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG-GLWLLVRGG--GLFLSKGTGI--TEEFEEVPV---- 259 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g-~~~~~~~~g--~i~~S~D~G~--tW~w~~~~~---- 259 (334)
.+.+.-|..-... ++- ...+.+. .+..+++.+.+ .+|++.+.. .||.-. |. +...+....
T Consensus 99 ~~~~~i~~~~~~~--~~~---~~~~~N~----g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~ 167 (255)
T 3qqz_A 99 TPNSEVKILKKIK--IPL---QESPTNC----GFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQ 167 (255)
T ss_dssp CTTCCEEEEEEEE--CCC---SSCCCSS----CCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHH
T ss_pred CCCCeeeeeeeec--ccc---ccccccC----CcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhc
Confidence 4444435321111 110 0011121 24567777655 688877653 455543 21 001111110
Q ss_pred -cCCCeeeEEEEeec-CCeEEEEeCC-CcEEEEcCCCcCcEEcccCCCc------ccceeEEEEeeCCeEEEEeCCeeEE
Q 036387 260 -QSRGFGILDVGYRS-QDEAWAAGGS-GVLLKTTNGGKTWIREKAADNI------AANLYSVKFINEKKGFVLGNDGVLL 330 (334)
Q Consensus 260 -~~~~~~~~~v~~~~-~~~~~~~G~~-G~i~~S~DgG~tW~~~~~~~~~------~~~l~~i~~~~~~~~~a~G~~G~il 330 (334)
......+-+++|.+ .+++|+.... ..|+.....|+-=..+....+. -..-..|++.++|++|++++.=.++
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y 247 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFY 247 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEE
T ss_pred cccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEE
Confidence 00112345677765 4678887664 5666666666532223321111 1255799999999999999887777
Q ss_pred EEc
Q 036387 331 QYL 333 (334)
Q Consensus 331 ~s~ 333 (334)
+.+
T Consensus 248 ~f~ 250 (255)
T 3qqz_A 248 RFT 250 (255)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 130
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=83.77 E-value=24 Score=31.55 Aligned_cols=73 Identities=12% Similarity=0.234 Sum_probs=37.5
Q ss_pred CCCcEEccc-CCCCCeeeEEEEEecCCCCEEEEEEcC-----------CeEEEEcCCCcCeEeCcCCCCcccCcceeEEE
Q 036387 101 LSAWERVYI-PVDPGVVLLDIAFVPDDLNHGFLLGTR-----------QTLLETKDGGKTWAPRSIPSAEEEDFNYRFNS 168 (334)
Q Consensus 101 G~tW~~~~~-p~~~~~~l~~I~~~p~d~~~~~avG~~-----------g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~ 168 (334)
..+|+.+.. |..+ ....+++.. + +.+|++|.. ..+++=+=.-.+|+++..... ... ....
T Consensus 42 ~~~W~~~~~~p~~~-R~~~~~~~~--~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p--~~r-~~~~- 113 (357)
T 2uvk_A 42 DKKWTALAAFPGGP-RDQATSAFI--D-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAP--MGM-AGHV- 113 (357)
T ss_dssp SCCEEECCCCTTCC-CBSCEEEEE--T-TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCS--SCC-SSEE-
T ss_pred CCCeeECCCCCCCc-CccceEEEE--C-CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCC--ccc-ccce-
Confidence 478998864 3122 223444444 2 678888643 124443334567998753221 111 1122
Q ss_pred EEEeCCeEEEEEc
Q 036387 169 ISFKGKEGWIVGK 181 (334)
Q Consensus 169 I~~~~~~~~~vG~ 181 (334)
+...++.+|++|.
T Consensus 114 ~~~~~~~iyv~GG 126 (357)
T 2uvk_A 114 TFVHNGKAYVTGG 126 (357)
T ss_dssp EEEETTEEEEEEC
T ss_pred EEEECCEEEEEeC
Confidence 2235678888864
No 131
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=83.72 E-value=21 Score=31.03 Aligned_cols=170 Identities=13% Similarity=0.068 Sum_probs=86.6
Q ss_pred CEEEEEEcC---CeEEEEcCCCcCeEeCcC-CCCcccCcceeEEEEEEeCCeEEEEEcC-----CEEEEEcCCCCCeEEe
Q 036387 128 NHGFLLGTR---QTLLETKDGGKTWAPRSI-PSAEEEDFNYRFNSISFKGKEGWIVGKP-----AILLHTSDAGESWERI 198 (334)
Q Consensus 128 ~~~~avG~~---g~i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~~I~~~~~~~~~vG~~-----g~i~~S~DgG~TW~~~ 198 (334)
+.+|++|.. ..+++=+-.-.+|+.+.. |.. .. .. .+...++.+|++|.. ..+++-+-.-.+|+.+
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~----r~-~~-~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEK----RR-DA-ACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCC----CB-SC-EEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcc----cc-ee-EEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 456666642 234443444567998753 221 11 11 233356788887642 3555555556789998
Q ss_pred ecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCC-------eEEEecCCCcceeeEecc-ccCCCeeeEEEE
Q 036387 199 PLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGG-------GLFLSKGTGITEEFEEVP-VQSRGFGILDVG 270 (334)
Q Consensus 199 ~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g-------~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~ 270 (334)
... |..... | .....++.+|+.+... .+++-.-... +|+.++ .|........+.
T Consensus 86 ~~~---p~~r~~---~----------~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~ 147 (306)
T 3ii7_A 86 LGP---PTPRDS---L----------AACAAEGKIYTSGGSEVGNSALYLFECYDTRTE--SWHTKPSMLTQRCSHGMVE 147 (306)
T ss_dssp ECC---SSCCBS---C----------EEEEETTEEEEECCBBTTBSCCCCEEEEETTTT--EEEEECCCSSCCBSCEEEE
T ss_pred CCC---Cccccc---e----------eEEEECCEEEEECCCCCCCcEeeeEEEEeCCCC--ceEeCCCCcCCcceeEEEE
Confidence 642 211110 0 1112367788776421 2433332233 456653 232111222222
Q ss_pred eecCCeEEEEeC----------CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 271 YRSQDEAWAAGG----------SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 271 ~~~~~~~~~~G~----------~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
-++.+|++|. ...+++-.-.-.+|+.+... +....-.++... ++++|++|.
T Consensus 148 --~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~-~~~i~v~GG 208 (306)
T 3ii7_A 148 --ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPM-IEARKNHGLVFV-KDKIFAVGG 208 (306)
T ss_dssp --ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCC-SSCCBSCEEEEE-TTEEEEECC
T ss_pred --ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCc-cchhhcceEEEE-CCEEEEEeC
Confidence 2678999875 22344444445689999752 333334444444 678999875
No 132
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=83.29 E-value=40 Score=33.84 Aligned_cols=196 Identities=10% Similarity=0.122 Sum_probs=92.2
Q ss_pred eeeEEEEEecCC-CCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC---CeEEEE-EcCCEEEEE
Q 036387 115 VVLLDIAFVPDD-LNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG---KEGWIV-GKPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d-~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~---~~~~~v-G~~g~i~~S 188 (334)
..+.++.|.|+. .+.++.++.+|.|.. ..+.| .|..+.....+ ...+.++.+.+ ...+++ +..+.|..-
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~-~~~~~~~~~~h----~~~V~~v~~sp~~~~~~l~sgs~dg~I~vw 128 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-RWSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSDGKVSVV 128 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT-EEEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC-cccccccccCC----CCCeEEEEECCCCCCCEEEEEeCCCcEEEE
Confidence 678999997632 455555666776422 23333 24333211111 12477888874 334444 445544332
Q ss_pred c-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-------------cCC-EEEEEcCCeE--EEecCCCcc
Q 036387 189 S-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-------------DGG-LWLLVRGGGL--FLSKGTGIT 251 (334)
Q Consensus 189 ~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-------------~g~-~~~~~~~g~i--~~S~D~G~t 251 (334)
+ +.+..-.... ...|. ..+..+.+.+ ++. ++..+.+|.| |....+..+
T Consensus 129 dl~~~~~~~~~~-----------~~~~~----~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 129 EFKENGTTSPII-----------IDAHA----IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT 193 (753)
T ss_dssp ECCSSSCCCCEE-----------EECCS----SCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE
T ss_pred EeecCCCcceeE-----------eecCC----CceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc
Confidence 1 1111111100 00111 1244455554 344 4444455544 333333332
Q ss_pred eeeEeccccCCCeeeEEEEeecC---CeEEEE-eCCCcE--EEEcCCCcCcEEcccC-CCcccceeEEEEeeCCeEEEE-
Q 036387 252 EEFEEVPVQSRGFGILDVGYRSQ---DEAWAA-GGSGVL--LKTTNGGKTWIREKAA-DNIAANLYSVKFINEKKGFVL- 323 (334)
Q Consensus 252 W~w~~~~~~~~~~~~~~v~~~~~---~~~~~~-G~~G~i--~~S~DgG~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a~- 323 (334)
+.... ........+.+++|.++ +..+++ +.+|.| |-...+...+...... ......+.+++|.+++..+++
T Consensus 194 ~~~~~-~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 194 YVLES-TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEE-EECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred ceeee-eecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 21111 11111235788888876 666555 456754 4333332333322211 123457889999887776555
Q ss_pred eCCeeEEE
Q 036387 324 GNDGVLLQ 331 (334)
Q Consensus 324 G~~G~il~ 331 (334)
+.+|.|..
T Consensus 273 s~Dg~I~v 280 (753)
T 3jro_A 273 GGDNKVTL 280 (753)
T ss_dssp CSSSCEEC
T ss_pred cCCCEEEE
Confidence 57787653
No 133
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.24 E-value=22 Score=30.81 Aligned_cols=159 Identities=8% Similarity=0.032 Sum_probs=78.9
Q ss_pred EEEEcCCCcCeEeCcC-CCCcccCcceeEEEEEEeCCeEEEEEcC------CEEEEEcCCCCC---eEEeecCCCCCCCc
Q 036387 139 LLETKDGGKTWAPRSI-PSAEEEDFNYRFNSISFKGKEGWIVGKP------AILLHTSDAGES---WERIPLSSQLPGDM 208 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~~I~~~~~~~~~vG~~------g~i~~S~DgG~T---W~~~~~~~~l~g~~ 208 (334)
++.=+-...+|+.+.. |.. .. . .++...++.+|+.|.. ..+++-+-.-.+ |+.+... |...
T Consensus 33 ~~~~d~~~~~W~~~~~~p~~----r~-~-~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~---p~~r 103 (301)
T 2vpj_A 33 VEKYDPKTQEWSFLPSITRK----RR-Y-VASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM---NVRR 103 (301)
T ss_dssp EEEEETTTTEEEECCCCSSC----CB-S-CEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC---SSCC
T ss_pred EEEEcCCCCeEEeCCCCChh----hc-c-ccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC---CCCc
Confidence 4433334567998752 221 11 1 1233356788887642 235554444556 9998632 2211
Q ss_pred ccccccCccccceEeeeeEeecCCEEEEEcC------CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEe
Q 036387 209 AFWQPHNRAVARRIQNMGWRADGGLWLLVRG------GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAG 281 (334)
Q Consensus 209 ~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~------g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G 281 (334)
.. + .+. ..++.+|+.+.. ..+++-.-...+ |+.++ .+........+. -++.+|++|
T Consensus 104 ~~---~---------~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~p~~r~~~~~~~--~~~~iyv~G 166 (301)
T 2vpj_A 104 GL---A---------GAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--WSMLGDMQTAREGAGLVV--ASGVIYCLG 166 (301)
T ss_dssp BS---C---------EEE-EETTEEEEECCBCSSCBCCEEEEEETTTTE--EEEEEECSSCCBSCEEEE--ETTEEEEEC
T ss_pred cc---e---------eEE-EECCEEEEEcccCCCcccceEEEEcCCCCe--EEECCCCCCCcccceEEE--ECCEEEEEC
Confidence 10 0 111 235778887631 234443333344 55543 222111122222 267899987
Q ss_pred CC------CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 282 GS------GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 282 ~~------G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
.. ..+++-.-...+|+.+... +......++... ++++|++|.
T Consensus 167 G~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r~~~~~~~~-~~~i~v~GG 214 (301)
T 2vpj_A 167 GYDGLNILNSVEKYDPHTGHWTNVTPM-ATKRSGAGVALL-NDHIYVVGG 214 (301)
T ss_dssp CBCSSCBCCCEEEEETTTTEEEEECCC-SSCCBSCEEEEE-TTEEEEECC
T ss_pred CCCCCcccceEEEEeCCCCcEEeCCCC-CcccccceEEEE-CCEEEEEeC
Confidence 52 2354444445689998652 233333444444 678999875
No 134
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=82.81 E-value=18 Score=32.51 Aligned_cols=109 Identities=14% Similarity=0.093 Sum_probs=58.5
Q ss_pred eEeeeeEeecCCEEEEEcCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcEE-EEcCCCcCcE
Q 036387 221 RIQNMGWRADGGLWLLVRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVLL-KTTNGGKTWI 297 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~-~S~DgG~tW~ 297 (334)
.+..+.|.+++.++..+.+|.|. +..+.|+.-.-...........+.+++|.+++..+++| .+|.|. .....|+--+
T Consensus 84 ~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 84 GVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 35667788877777667777652 23333331000111111111257899998777666654 567652 2233333222
Q ss_pred EcccCCCcccceeEEEEeeCC-eEEE-EeCCeeEEEE
Q 036387 298 REKAADNIAANLYSVKFINEK-KGFV-LGNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~-~~~a-~G~~G~il~s 332 (334)
.+.. -...+.++.|.+++ .+++ ++.+|.|..+
T Consensus 164 ~~~~---h~~~V~~~~~~~~~~~~l~s~s~D~~v~iw 197 (344)
T 4gqb_B 164 SYRA---HAAQVTCVAASPHKDSVFLSCSEDNRILLW 197 (344)
T ss_dssp EECC---CSSCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEcC---cCCceEEEEecCCCCCceeeeccccccccc
Confidence 2221 23578899997654 4554 5678877654
No 135
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=82.50 E-value=25 Score=31.01 Aligned_cols=189 Identities=7% Similarity=0.006 Sum_probs=89.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEEEEE--c
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAILLHT--S 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i~~S--~ 189 (334)
..+.++.|.| |.+.++.++.+|.|.. ....++.=..+.... ..+..+.|.+ +..++. +..+.+..- .
T Consensus 56 ~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~-------~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 56 AKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS-------SWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp SCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSS-------SCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred CceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCC-------ccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 5688999987 4555555566776433 112222111111111 1467788875 444444 444533221 1
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
........... + ..|. ..+..+.+.+++.++..+.++.|. +....++. -.. +......+.+
T Consensus 128 ~~~~~~~~~~~---~-------~~h~----~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~--~~~--~~~h~~~v~~ 189 (340)
T 1got_B 128 TREGNVRVSRE---L-------AGHT----GYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQ--TTT--FTGHTGDVMS 189 (340)
T ss_dssp TCSBSCEEEEE---E-------ECCS----SCEEEEEEEETTEEEEEETTSCEEEEETTTTEE--EEE--ECCCSSCEEE
T ss_pred cCCCcceeEEE---e-------cCCC----ccEEEEEECCCCcEEEEECCCcEEEEECCCCcE--EEE--EcCCCCceEE
Confidence 11111111110 0 0111 124445566666666566666543 22233321 111 1111125788
Q ss_pred EEeecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 269 VGYRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 269 v~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
+.|.+++..+++ +.+|.|.. ....++.=+.+. .-...+.+++|.+++..+++ +.+|.|.-+
T Consensus 190 ~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~---~h~~~v~~v~~~p~~~~l~s~s~d~~v~iw 253 (340)
T 1got_B 190 LSLAPDTRLFVSGACDASAKLWDVREGMCRQTFT---GHESDINAICFFPNGNAFATGSDDATCRLF 253 (340)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEEC---CCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEc---CCcCCEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 888877766665 45676522 222232212222 12357899999887776665 577776543
No 136
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=82.21 E-value=24 Score=30.45 Aligned_cols=187 Identities=11% Similarity=0.098 Sum_probs=90.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEE-cC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHT-SD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S-~D 190 (334)
..+.++.|.| +.+.++.++.+|.|.. ....|+ ........ ...+.++.+.+ +..++ .+..+.|..- .+
T Consensus 24 ~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~-~~~~~~~h------~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 24 KAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK-FEKTISGH------KLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC-EEEEECCC------SSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcc-cchhhccC------CCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 5789999987 4555555566676432 222232 22221111 12477888875 44444 4455544332 12
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.++.=..+. .|. ..+..+.+.+++..++.+ .++.|. +....++. ...+. .....+..
T Consensus 96 ~~~~~~~~~-------------~~~----~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--~~~~~--~~~~~v~~ 154 (312)
T 4ery_A 96 SGKCLKTLK-------------GHS----NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC--LKTLP--AHSDPVSA 154 (312)
T ss_dssp TCCEEEEEE-------------CCS----SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE--EEEEC--CCSSCEEE
T ss_pred CCcEEEEEc-------------CCC----CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE--EEEec--CCCCcEEE
Confidence 222111111 111 124456677777766554 455443 22233321 11211 11225778
Q ss_pred EEeecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 269 VGYRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 269 v~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
+.|.+++..+++ +.+|.|.. ....++.=..+.. .....+..+.|.++++.++ ++.+|.|..+
T Consensus 155 ~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 155 VHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLDNTLKLW 219 (312)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 888776655554 45676522 2222332222222 1234678888887766554 5677776544
No 137
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=80.72 E-value=29 Score=30.57 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=39.1
Q ss_pred eeEEEEeecCCeEEEE-eCCCcEE--EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEE
Q 036387 265 GILDVGYRSQDEAWAA-GGSGVLL--KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQ 331 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~i~--~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~ 331 (334)
.+..++|.+++..+++ +.+|.|. -....+..-..+.. ...+.+++|.++++++++|.++.+..
T Consensus 215 ~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~----~~~v~~v~~sp~~~~la~~~d~~v~i 280 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDA----GSTINQIAFNPKLQWVAVGTDQGVKI 280 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEEC----SSCEEEEEECSSSCEEEEEESSCEEE
T ss_pred cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecC----CCcEEEEEECCCCCEEEEECCCCEEE
Confidence 5788888877766655 4567653 22232322222221 24589999999889888887765543
No 138
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=79.68 E-value=19 Score=31.88 Aligned_cols=106 Identities=13% Similarity=0.039 Sum_probs=58.2
Q ss_pred EeeeeEee--cCCEEEE-EcCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcEE-EEcCCCcC
Q 036387 222 IQNMGWRA--DGGLWLL-VRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVLL-KTTNGGKT 295 (334)
Q Consensus 222 i~~~~~~~--~g~~~~~-~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~-~S~DgG~t 295 (334)
+..+.+.+ ++..++. +.++.|. +....++. ....... ....+..++|.+++..+++| .+|.|. .....++.
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~--~~~~~~~-~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ--YIVHSAK-SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ 204 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCE--EEEECCC-SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE--EEEEecC-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC
Confidence 45566666 6776664 4455442 33344442 1111111 11246788888888887775 466652 22333433
Q ss_pred c-EEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 296 W-IREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 296 W-~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
- ..+.. .-...+.+|.|.+++..++++.++.|..+
T Consensus 205 ~~~~~~~--~h~~~v~~l~fs~~g~~l~s~~~~~v~iw 240 (343)
T 3lrv_A 205 ASSRFPV--DEEAKIKEVKFADNGYWMVVECDQTVVCF 240 (343)
T ss_dssp CCEECCC--CTTSCEEEEEECTTSSEEEEEESSBEEEE
T ss_pred CccEEec--cCCCCEEEEEEeCCCCEEEEEeCCeEEEE
Confidence 2 23322 12368999999998888888767765543
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=79.65 E-value=26 Score=29.21 Aligned_cols=175 Identities=13% Similarity=0.064 Sum_probs=82.6
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCC-CcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEEEc----CCEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDG-GKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIVGK----PAILL 186 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~Dg-G~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~----~g~i~ 186 (334)
..+.++.+.| |.+.+ +++..+.|+. ..+. |+ ...+..... ...+..+.+.+ +. ++++.. ...|+
T Consensus 42 ~~v~~~~~sp-dg~~l-~~~~~~~i~~~d~~~~~~-~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~~~~~~l~ 113 (297)
T 2ojh_A 42 ELFEAPNWSP-DGKYL-LLNSEGLLYRLSLAGDPS-PEKVDTGFA-----TICNNDHGISPDGALYAISDKVEFGKSAIY 113 (297)
T ss_dssp SCCEEEEECT-TSSEE-EEEETTEEEEEESSSCCS-CEECCCTTC-----CCBCSCCEECTTSSEEEEEECTTTSSCEEE
T ss_pred cceEeeEECC-CCCEE-EEEcCCeEEEEeCCCCCC-ceEeccccc-----cccccceEECCCCCEEEEEEeCCCCcceEE
Confidence 4678899987 44544 4455665543 3444 43 333321110 01345566764 33 444441 34565
Q ss_pred EEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE-E-EcCC--eEEEe-cCCCcceeeEeccccC
Q 036387 187 HTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL-L-VRGG--GLFLS-KGTGITEEFEEVPVQS 261 (334)
Q Consensus 187 ~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~-~-~~~g--~i~~S-~D~G~tW~w~~~~~~~ 261 (334)
.-+-.+..-+.+... . .+..+.+.+++..++ + ..++ .||.- .++++ ...+....
T Consensus 114 ~~~~~~~~~~~~~~~-----~-------------~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~ 172 (297)
T 2ojh_A 114 LLPSTGGTPRLMTKN-----L-------------PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV---ETRLTHGE 172 (297)
T ss_dssp EEETTCCCCEECCSS-----S-------------SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC---EEECCCSS
T ss_pred EEECCCCceEEeecC-----C-------------CccceEECCCCCEEEEEECCCCceEEEEEECCCCc---ceEcccCC
Confidence 544223333333211 0 122355677776433 3 3344 35543 33443 22322111
Q ss_pred CCeeeEEEEeecCCe-EEEEeC-C--CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 262 RGFGILDVGYRSQDE-AWAAGG-S--GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~-~~~~G~-~--G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
..+..+.+.+++. +++++. + ..||.-.-.+...+.+... ...+..+.+.++++.+++
T Consensus 173 --~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 173 --GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDS---AYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp --SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCC---SEEEEEEEECTTSSEEEE
T ss_pred --CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecC---CcccCCeEECCCCCEEEE
Confidence 2456777776665 444442 3 3455544234445555431 246778888877765444
No 140
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=79.20 E-value=33 Score=30.24 Aligned_cols=107 Identities=8% Similarity=-0.026 Sum_probs=57.4
Q ss_pred eEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcEEEE-cCCCcCc
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVLLKT-TNGGKTW 296 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~~S-~DgG~tW 296 (334)
.+..+.|.+++..++++ .++.|. +....++. ......+.....+..+.|.+++..+++| .+|.|..- ...++.-
T Consensus 228 ~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQE--LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE--EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 35667788888766654 445442 22222321 1111111112357888998877766654 45655322 2223222
Q ss_pred EEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 297 IREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 297 ~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
..+.. -...+.++.|.++++.++ ++.+|.|.-+
T Consensus 306 ~~~~~---h~~~v~~~~~s~dg~~l~s~s~D~~i~iW 339 (340)
T 1got_B 306 GVLAG---HDNRVSCLGVTDDGMAVATGSWDSFLKIW 339 (340)
T ss_dssp EEEEC---CSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred eEeec---CCCcEEEEEEcCCCCEEEEEcCCccEEec
Confidence 22221 235789999998877655 4578877654
No 141
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=79.18 E-value=33 Score=30.28 Aligned_cols=181 Identities=15% Similarity=0.157 Sum_probs=93.9
Q ss_pred eeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEc-------CCEEEE
Q 036387 116 VLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGK-------PAILLH 187 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~-------~g~i~~ 187 (334)
.+.+|++.++ +++|++...+......+.|+ .+.+..... ......++++.+++ +++|+... .+.||+
T Consensus 91 ~v~~i~~~~d--g~l~v~~~~gl~~~d~~~g~-~~~~~~~~~--~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 91 MGSALAKISD--SKQLIASDDGLFLRDTATGV-LTLHAELES--DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp CEEEEEEEET--TEEEEEETTEEEEEETTTCC-EEEEECSST--TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred cceEEEEeCC--CeEEEEECCCEEEEECCCCc-EEEEeeCCC--CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 5778888763 66777665553333444443 554322110 01123577888875 66777542 257777
Q ss_pred EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEc-CCeEEEec-C--CC-cc---eeeEecc
Q 036387 188 TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVR-GGGLFLSK-G--TG-IT---EEFEEVP 258 (334)
Q Consensus 188 S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~-~g~i~~S~-D--~G-~t---W~w~~~~ 258 (334)
-+ .| +.+.+.... . ....+.+++++. +|++.. .+.|++-. | .| .- -.+...
T Consensus 166 ~~-~g-~~~~~~~~~--~---------------~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~- 225 (326)
T 2ghs_A 166 VA-KG-KVTKLFADI--S---------------IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS- 225 (326)
T ss_dssp EE-TT-EEEEEEEEE--S---------------SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-
T ss_pred Ee-CC-cEEEeeCCC--c---------------ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC-
Confidence 66 33 344432110 0 012355667775 666653 45665543 3 45 21 012221
Q ss_pred ccCCCeeeEEEEeecCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEEe-eC-CeEEEEeC
Q 036387 259 VQSRGFGILDVGYRSQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKFI-NE-KKGFVLGN 325 (334)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~-~~-~~~~a~G~ 325 (334)
........++.+..++.+|++.. .+.|++-.-.|+.-+.+..+ ...+.+++|. ++ +++|++..
T Consensus 226 -~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~g~~~~~i~~~---~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 226 -TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTDGNHIARYEVP---GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp -TTSSSEEEEEEECTTSCEEEEEETTTEEEEECTTCCEEEEEECS---CSBEEEEEEESTTSCEEEEEEB
T ss_pred -CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCCCCEEEEEECC---CCCcEEEEEecCCCCEEEEEec
Confidence 11111345677777788998753 35565543345544445442 2468889987 44 56877654
No 142
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=79.14 E-value=15 Score=33.49 Aligned_cols=108 Identities=14% Similarity=0.060 Sum_probs=61.4
Q ss_pred eeeEeecCC-EEEEEcCCeEEEecCCCcceeeEec-ccc----CCCeeeEEEEeec----CCeEEEEeC--------CCc
Q 036387 224 NMGWRADGG-LWLLVRGGGLFLSKGTGITEEFEEV-PVQ----SRGFGILDVGYRS----QDEAWAAGG--------SGV 285 (334)
Q Consensus 224 ~~~~~~~g~-~~~~~~~g~i~~S~D~G~tW~w~~~-~~~----~~~~~~~~v~~~~----~~~~~~~G~--------~G~ 285 (334)
.+.+.++|. +|++...|.|++-..+|.. . +.+ .++ ....+++++++.+ ++.+|++-. ...
T Consensus 22 ~i~~~pdG~~l~V~e~~G~i~~~~~~g~~-~-~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~ 99 (353)
T 2g8s_A 22 ALAFLPDNHGMLITLRGGELRHWQAGKGL-S-APLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTA 99 (353)
T ss_dssp EEEECSTTCCEEEEETTTEEEEEETTTEE-C-CCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEE
T ss_pred EEEEcCCCCEEEEEeCCceEEEEeCCCce-e-eEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeE
Confidence 467788999 9998888888876555541 0 111 111 1123578888875 478888732 124
Q ss_pred EEEEcC--CCc---CcEEcccCCC----cccceeEEEEeeCCeEEEEe-C-------------CeeEEEEc
Q 036387 286 LLKTTN--GGK---TWIREKAADN----IAANLYSVKFINEKKGFVLG-N-------------DGVLLQYL 333 (334)
Q Consensus 286 i~~S~D--gG~---tW~~~~~~~~----~~~~l~~i~~~~~~~~~a~G-~-------------~G~il~s~ 333 (334)
|++-+. ++. +.+.+-...+ ....-..|.|.+++.+|++- + .|.|+|.+
T Consensus 100 v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 100 VGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp EEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred EEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 554332 221 2333321111 11224579999999999873 3 36788864
No 143
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=78.35 E-value=36 Score=30.14 Aligned_cols=197 Identities=11% Similarity=0.156 Sum_probs=93.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCC--EEEEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPA--ILLHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g--~i~~S~ 189 (334)
..+.+|+|.| +.+.++.++.++.|.. ..+.+..++.+..-..+ ...+..+.+.+ +..++. +..+ .||...
T Consensus 106 ~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 106 NEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH----TQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC----CSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred CCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc----CCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 5789999988 4555555566675422 23344444433211111 11477888875 444444 4444 333333
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeE--EEecCCCcc---------eeeEec
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGL--FLSKGTGIT---------EEFEEV 257 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i--~~S~D~G~t---------W~w~~~ 257 (334)
. ..|..+.. +.+ |. ..+..+.|.+++..++.+ .++.| |.....+.. -.|..+
T Consensus 181 ~--~~~~~~~~---~~~-------h~----~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 181 E--DDWVCCAT---LEG-------HE----STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp T--TEEEEEEE---ECC-------CS----SCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred C--CCEEEEEE---ecC-------CC----CceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 2 23443321 111 11 135667888888766554 45543 433222110 011111
Q ss_pred c-ccC-CCeeeEEEEeecCCeEEEE-eCCCcE--EEEcCCCcC----cEEccc-CCCcccceeEEEEeeCC-eEE-EEeC
Q 036387 258 P-VQS-RGFGILDVGYRSQDEAWAA-GGSGVL--LKTTNGGKT----WIREKA-ADNIAANLYSVKFINEK-KGF-VLGN 325 (334)
Q Consensus 258 ~-~~~-~~~~~~~v~~~~~~~~~~~-G~~G~i--~~S~DgG~t----W~~~~~-~~~~~~~l~~i~~~~~~-~~~-a~G~ 325 (334)
. ... ....+.+++|.+.+..+++ +.++.+ |....+... ...... ...-...+.+|+|.+++ .++ .++.
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~ 324 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSD 324 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEET
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCC
Confidence 1 111 1235788888766554444 455554 322221111 111100 00113568999998765 344 4568
Q ss_pred CeeEEEE
Q 036387 326 DGVLLQY 332 (334)
Q Consensus 326 ~G~il~s 332 (334)
+|.|..+
T Consensus 325 Dg~v~~W 331 (345)
T 3fm0_A 325 DGEVAFW 331 (345)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 8877644
No 144
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=78.23 E-value=39 Score=30.52 Aligned_cols=68 Identities=6% Similarity=0.054 Sum_probs=37.1
Q ss_pred eeEEEEeecCCeEEEEeCCCcEEE-EcC-CCcCcEEcccCCCccc------------ceeEEEEeeCCeEEEE-eCCeeE
Q 036387 265 GILDVGYRSQDEAWAAGGSGVLLK-TTN-GGKTWIREKAADNIAA------------NLYSVKFINEKKGFVL-GNDGVL 329 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~G~~G~i~~-S~D-gG~tW~~~~~~~~~~~------------~l~~i~~~~~~~~~a~-G~~G~i 329 (334)
.+..+.|.+++..++++..|.|.. ... .++.-..+........ ..+.+.|.+++..+++ +.+|.|
T Consensus 287 ~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v 366 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFF 366 (447)
T ss_dssp CEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEE
T ss_pred eEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEE
Confidence 578899988777777655576522 222 2433333322110000 1334888887765554 577877
Q ss_pred EEE
Q 036387 330 LQY 332 (334)
Q Consensus 330 l~s 332 (334)
.-+
T Consensus 367 ~iw 369 (447)
T 3dw8_B 367 RMF 369 (447)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 145
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=77.96 E-value=35 Score=29.81 Aligned_cols=107 Identities=11% Similarity=0.138 Sum_probs=60.0
Q ss_pred eEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCC-CcEEEEcCCCcCcE
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGS-GVLLKTTNGGKTWI 297 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~-G~i~~S~DgG~tW~ 297 (334)
.+..+.+.+++..++.+ .++.|. +....++. ...+... ..+..++|.+++..++++.. +....+.|.+....
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~---~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~ 272 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKKA--MYTLSAQ---DEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVD 272 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEE--EEEEECC---SCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE--EEEecCC---CcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeee
Confidence 35567788888866654 455442 22233321 1122211 25788899887777666544 43344556555444
Q ss_pred EcccC-----CCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 298 REKAA-----DNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~-----~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+... ......+.+++|.++++.+++ +.+|.|..+
T Consensus 273 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vW 313 (319)
T 3frx_A 273 DLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVW 313 (319)
T ss_dssp EECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEE
Confidence 44321 011245789999988876665 578877543
No 146
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=77.78 E-value=57 Score=32.22 Aligned_cols=190 Identities=10% Similarity=0.024 Sum_probs=96.2
Q ss_pred CeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEEcCCEEE-EEcC
Q 036387 114 GVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVGKPAILL-HTSD 190 (334)
Q Consensus 114 ~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG~~g~i~-~S~D 190 (334)
...+.+++|.| |...+.+++.+|.++.=...+ -+.... ... ......+.+++|++ +.++.+++.|.|- ....
T Consensus 85 ~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~--~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 85 VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKG--NLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCCEEEEEECS-SSSCEEEEETTSCEEEEETTE-EEEECC-CSS--CSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc-eeeecc-CCC--ccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 36799999998 456655566677654422222 232222 111 00011477899985 4455566667442 2233
Q ss_pred CCC-------CeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEE-EecCCCcce-eeEeccccC
Q 036387 191 AGE-------SWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLF-LSKGTGITE-EFEEVPVQS 261 (334)
Q Consensus 191 gG~-------TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW-~w~~~~~~~ 261 (334)
++. ..+.+... ..| |. ..+..+.|.+++ +.+++.++.+. +..++++.- .++.+. +.
T Consensus 160 ~~~l~~~~~i~l~ti~~~--~~g-------h~----~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~-~~ 224 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLS--DAG-------SK----DWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQ-NA 224 (588)
T ss_dssp CCTTTCCCCEEEEEEECS--CTT-------CC----CCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEE-CC
T ss_pred CCccccccceeeeeeecc--ccc-------cc----ccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeec-cc
Confidence 332 12222211 011 11 136678888888 66666666554 334444310 011221 11
Q ss_pred CCeeeEEEEeecCCeEEEEeCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEE--eeCCeEEEEe-CCee
Q 036387 262 RGFGILDVGYRSQDEAWAAGGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKF--INEKKGFVLG-NDGV 328 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~--~~~~~~~a~G-~~G~ 328 (334)
....+.+++|. + ..++++.++.| +...++++. ..... +-...+++|.+ .+++..++++ ++|.
T Consensus 225 h~~~V~svaFs-g-~~LASa~~~tIkLWd~~~~~~-~~~~~--gh~~~V~~va~~~s~d~~~La~a~edG~ 290 (588)
T 2j04_A 225 SRRKITDLKIV-D-YKVVLTCPGYVHKIDLKNYSI-SSLKT--GSLENFHIIPLNHEKESTILLMSNKTSY 290 (588)
T ss_dssp CSSCCCCEEEE-T-TEEEEECSSEEEEEETTTTEE-EEEEC--SCCSCCCEEEETTCSSCEEEEECSSCEE
T ss_pred ccCcEEEEEEE-C-CEEEEEeCCeEEEEECCCCeE-EEEEc--CCCceEEEEEeeeCCCCCEEEEEcCCCC
Confidence 11246788887 4 44555556765 333343321 12222 22467999999 8888777765 4887
No 147
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=77.50 E-value=20 Score=33.08 Aligned_cols=109 Identities=16% Similarity=0.198 Sum_probs=55.3
Q ss_pred eEeeeeEee-cCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEEEEeec-C-CeEEEEeCCCcEEE-EcCCCc
Q 036387 221 RIQNMGWRA-DGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILDVGYRS-Q-DEAWAAGGSGVLLK-TTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~-~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~~~~-~-~~~~~~G~~G~i~~-S~DgG~ 294 (334)
+|..+.|.| ++.+++++ .+|.|.. ..+.+.. ............+.++.|.+ + +.++.++.+|.|.. ... ++
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~--~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~-~~ 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK--PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK-GN 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC--CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT-SC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc--eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc-CC
Confidence 466777876 34555544 5565532 2233321 11111111123578888874 3 34444556776632 222 22
Q ss_pred CcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 295 TWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 295 tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.-+.+.........+.++++.+++..+++ +.+|.|..+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~w 236 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILL 236 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEE
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeee
Confidence 23333332222345778888877776665 467776543
No 148
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=77.04 E-value=37 Score=29.61 Aligned_cols=196 Identities=9% Similarity=0.131 Sum_probs=93.5
Q ss_pred eeeEEEEEecC-CCCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC---CeEEEE-EcCCEEEE
Q 036387 115 VVLLDIAFVPD-DLNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG---KEGWIV-GKPAILLH 187 (334)
Q Consensus 115 ~~l~~I~~~p~-d~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~---~~~~~v-G~~g~i~~ 187 (334)
..+.++.|.++ +.+.++.++.+|. ||.... ++ |..+..-... ...+.++.+.+ ...+++ +..+.|..
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~-~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-GR-WSQIAVHAVH----SASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEET-TE-EEEEEEECCC----SSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCC-Cc-eeEeeeecCC----CcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 57899999642 1455555566675 343333 32 4333211111 12477888874 234444 45554332
Q ss_pred E-cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-------------cCCEEEEE-cCCeE--EEecCCCc
Q 036387 188 T-SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-------------DGGLWLLV-RGGGL--FLSKGTGI 250 (334)
Q Consensus 188 S-~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-------------~g~~~~~~-~~g~i--~~S~D~G~ 250 (334)
- .+.+.....+.. ..+. ..+..+.+.+ ++..++++ .++.| |-...+..
T Consensus 130 ~d~~~~~~~~~~~~-----------~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 130 VEFKENGTTSPIII-----------DAHA----IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp EECCTTSCCCEEEE-----------ECCT----TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred EecCCCCceeeEEe-----------cCCC----CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 1 111211111111 0111 1244555655 45655544 45544 33333333
Q ss_pred ceeeEeccccCCCeeeEEEEeecC---CeEEEE-eCCCcE--EEEcCCCcCcEEcccC-CCcccceeEEEEeeCCeEEE-
Q 036387 251 TEEFEEVPVQSRGFGILDVGYRSQ---DEAWAA-GGSGVL--LKTTNGGKTWIREKAA-DNIAANLYSVKFINEKKGFV- 322 (334)
Q Consensus 251 tW~w~~~~~~~~~~~~~~v~~~~~---~~~~~~-G~~G~i--~~S~DgG~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a- 322 (334)
.+.... ........+.+++|.++ +..+++ +.+|.| |....+...+...... ......+.++.|.++++.++
T Consensus 195 ~~~~~~-~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 273 (379)
T 3jrp_A 195 TYVLES-TLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLAL 273 (379)
T ss_dssp EEEEEE-EECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEE
T ss_pred ceeeEE-EEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEE
Confidence 222111 11211235788888876 565555 456754 4444433333332221 12346789999988776555
Q ss_pred EeCCeeEEEE
Q 036387 323 LGNDGVLLQY 332 (334)
Q Consensus 323 ~G~~G~il~s 332 (334)
++.+|.|..+
T Consensus 274 ~~~dg~i~iw 283 (379)
T 3jrp_A 274 SGGDNKVTLW 283 (379)
T ss_dssp EESSSSEEEE
T ss_pred ecCCCcEEEE
Confidence 5688876543
No 149
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=75.93 E-value=54 Score=30.99 Aligned_cols=146 Identities=9% Similarity=0.036 Sum_probs=75.8
Q ss_pred EEEEEeC-CeEEEEEcCC-EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee----cCCEEEEEc--
Q 036387 167 NSISFKG-KEGWIVGKPA-ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA----DGGLWLLVR-- 238 (334)
Q Consensus 167 ~~I~~~~-~~~~~vG~~g-~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~----~g~~~~~~~-- 238 (334)
..|+|.+ .++|++-..+ .|++=++....-+.+..- +.. +..+. -...+..+++.+ ++.+|+...
T Consensus 30 ~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~---~~~--~~~~~---g~~Gllgia~~Pdf~~~g~lYv~~s~~ 101 (454)
T 1cru_A 30 HALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQV---PEI--VNDAD---GQNGLLGFAFHPDFKNNPYIYISGTFK 101 (454)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TTC--CCCTT---SSCSEEEEEECTTTTTSCEEEEEEEEE
T ss_pred eEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecC---Ccc--ccccC---CCCceeEEEECCCcCcCCEEEEEEecc
Confidence 4677765 6777776554 577766543334444321 110 00000 011344566666 456777642
Q ss_pred -----------CCeEEEecCCC--cce-eeEec--cccCC-CeeeEEEEeecCCeEEEE-eC------------------
Q 036387 239 -----------GGGLFLSKGTG--ITE-EFEEV--PVQSR-GFGILDVGYRSQDEAWAA-GG------------------ 282 (334)
Q Consensus 239 -----------~g~i~~S~D~G--~tW-~w~~~--~~~~~-~~~~~~v~~~~~~~~~~~-G~------------------ 282 (334)
...|+|-++.+ ... +.+.+ .++.. .+....+.|.+++.+|++ |.
T Consensus 102 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~ 181 (454)
T 1cru_A 102 NPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHT 181 (454)
T ss_dssp CTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCC
T ss_pred ccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccccccccc
Confidence 23566654321 111 11221 12322 233567888888888886 32
Q ss_pred --------------CCcEEEEcCCCc-----------CcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 283 --------------SGVLLKTTNGGK-----------TWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 283 --------------~G~i~~S~DgG~-----------tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
.|.|+|-..+|+ ..+.... ..++.+.++|.+++++|++
T Consensus 182 p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~---G~RNp~gla~dp~G~L~~~ 244 (454)
T 1cru_A 182 PTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTL---GHRNPQGLAFTPNGKLLQS 244 (454)
T ss_dssp CCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEB---CCSEEEEEEECTTSCEEEE
T ss_pred cccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEE---CCCCcceEEECCCCCEEEE
Confidence 256777665554 2333332 1357788899878888876
No 150
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=75.32 E-value=44 Score=29.70 Aligned_cols=106 Identities=12% Similarity=0.070 Sum_probs=56.1
Q ss_pred EeeeeEeecCCEEEEE-cCCeEEE-ecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcEEE-EcCCCcCcE
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVLLK-TTNGGKTWI 297 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i~~-S~DgG~tW~ 297 (334)
+..+.+.+++..++++ .++.+.. ....+. .............+..+.|.+++..+++| .++.|.. ....|+.-.
T Consensus 243 v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~ 320 (354)
T 2pbi_B 243 VNSVRYYPSGDAFASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVS 320 (354)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred eEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEE
Confidence 5567777887766654 3444321 111221 11111111112346778887777666654 4665522 223343333
Q ss_pred EcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 298 REKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.. -...+.+++|.++++.+++ +.+|.|.-+
T Consensus 321 ~l~~---h~~~v~~l~~spdg~~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 321 ILFG---HENRVSTLRVSPDGTAFCSGSWDHTLRVW 353 (354)
T ss_dssp EECC---CSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred EEEC---CCCcEEEEEECCCCCEEEEEcCCCCEEec
Confidence 3322 2357999999988876665 578877654
No 151
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=75.04 E-value=50 Score=30.19 Aligned_cols=145 Identities=8% Similarity=0.003 Sum_probs=74.7
Q ss_pred EEEEEeC-CeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee----cCCEEEEE---
Q 036387 167 NSISFKG-KEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA----DGGLWLLV--- 237 (334)
Q Consensus 167 ~~I~~~~-~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~----~g~~~~~~--- 237 (334)
..|+|.+ .++|+.-. .|.|++-++.+..-+.+...+.+ +... ...+..+++.+ ++.+|+.-
T Consensus 35 ~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v-----~~~g-----~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 35 WGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV-----SPSG-----EGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp EEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-----CCBT-----TBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred eEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce-----eecC-----CCCceeeEeccccccCCEEEEEEecC
Confidence 4667764 56666655 67777766543334544321111 0000 11244566655 46677752
Q ss_pred cCCeEEEecCCC-----cce-eeEec--cccCC-CeeeEEEEeecCCeEEEE-eC-------------CCcEEEEcCCCc
Q 036387 238 RGGGLFLSKGTG-----ITE-EFEEV--PVQSR-GFGILDVGYRSQDEAWAA-GG-------------SGVLLKTTNGGK 294 (334)
Q Consensus 238 ~~g~i~~S~D~G-----~tW-~w~~~--~~~~~-~~~~~~v~~~~~~~~~~~-G~-------------~G~i~~S~DgG~ 294 (334)
....|+|-+..+ ... +.+.+ .++.. .+.-..+.|.+++.+|+. |. .|.|+|-.-+|+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 345677655433 111 11111 12221 122235777777888886 32 367777765565
Q ss_pred --------CcEEcccCCCcccceeEEEEeeCCeEEEEe
Q 036387 295 --------TWIREKAADNIAANLYSVKFINEKKGFVLG 324 (334)
Q Consensus 295 --------tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G 324 (334)
..+.... ...+.+.+++.+++++|++-
T Consensus 185 ip~~nPf~~~~i~a~---G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 185 PAPGNPFPGSPVYSY---GHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp BCTTCSSTTCCEEEB---CCSBCCEEEECTTCCEEEEE
T ss_pred ccCCCCCCCCeEEee---CCCCcceEEECCCCCEEEEe
Confidence 2233322 12467788988888888763
No 152
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=74.27 E-value=84 Score=32.41 Aligned_cols=189 Identities=8% Similarity=0.004 Sum_probs=90.0
Q ss_pred eeeEEEEEecCCCCEEEEEE-cCCeEEE-EcCCCcCeEeCc-CCCCcccCcceeEEEEEEeCCe-EEEEEcCCEEEEE-c
Q 036387 115 VVLLDIAFVPDDLNHGFLLG-TRQTLLE-TKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKGKE-GWIVGKPAILLHT-S 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG-~~g~i~~-S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~~~-~~~vG~~g~i~~S-~ 189 (334)
..+.+++|.|+ .+ .+|+| .+|.|.. ..+.+ +... .+. ...+..|.|.+++ ++.++..+.|..- .
T Consensus 18 ~~V~~lafspd-g~-~lAsgs~Dg~I~lw~~~~~---~~~~~~~~------~~~V~~l~fspg~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 18 SKPIAAAFDFT-QN-LLAIATVTGEVHIYGQQQV---EVVIKLED------RSAIKEMRFVKGIYLVVINAKDTVYVLSL 86 (902)
T ss_dssp SCEEEEEEETT-TT-EEEEEETTSEEEEECSTTC---EEEEECSS------CCCEEEEEEETTTEEEEEETTCEEEEEET
T ss_pred CCcEEEEECCC-CC-EEEEEeCCCEEEEEeCCCc---EEEEEcCC------CCCEEEEEEcCCCEEEEEECcCeEEEEEC
Confidence 46899999984 34 45554 4666543 12222 1111 111 1257888888744 3334445543321 2
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEE-EecCCCcceeeEe-------cccc
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLF-LSKGTGITEEFEE-------VPVQ 260 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~-~S~D~G~tW~w~~-------~~~~ 260 (334)
+.|+.=..+. +. ..+..+.+.+++..+++ +.+|.|. +..+.++.-.+.. ....
T Consensus 87 ~~~~~~~~~~--------------~~----~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 87 YSQKVLTTVF--------------VP----GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp TTCSEEEEEE--------------CS----SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred CCCcEEEEEc--------------CC----CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 2222111111 00 13556677777775554 4555543 3333333100110 0011
Q ss_pred CCCeeeEEEEeecCC-eEEEE-eCCCcEEEEcCCCcCcEEcccC---------------CCcccceeEEEEeeCCeEEEE
Q 036387 261 SRGFGILDVGYRSQD-EAWAA-GGSGVLLKTTNGGKTWIREKAA---------------DNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 261 ~~~~~~~~v~~~~~~-~~~~~-G~~G~i~~S~DgG~tW~~~~~~---------------~~~~~~l~~i~~~~~~~~~a~ 323 (334)
.....+.+++|.+.+ ..+++ +.+|.++.....++.=+.+... ..-...+.+++|.++++.+++
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 111257788887643 34444 4456664444444322222110 000145899999988776665
Q ss_pred -eCCeeEEEE
Q 036387 324 -GNDGVLLQY 332 (334)
Q Consensus 324 -G~~G~il~s 332 (334)
+.+|.|.-+
T Consensus 229 gs~Dg~i~lW 238 (902)
T 2oaj_A 229 IHEDNSLVFW 238 (902)
T ss_dssp EETTCCEEEE
T ss_pred EECCCeEEEE
Confidence 578877654
No 153
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=73.78 E-value=46 Score=29.21 Aligned_cols=144 Identities=12% Similarity=0.123 Sum_probs=72.5
Q ss_pred EEEEEEeC-CeEEEEEc-CCEEEEEcCCCC--CeEEeecCCCCCCC--cccccccCccccceEeeeeEee-cCCEEEEEc
Q 036387 166 FNSISFKG-KEGWIVGK-PAILLHTSDAGE--SWERIPLSSQLPGD--MAFWQPHNRAVARRIQNMGWRA-DGGLWLLVR 238 (334)
Q Consensus 166 ~~~I~~~~-~~~~~vG~-~g~i~~S~DgG~--TW~~~~~~~~l~g~--~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~~ 238 (334)
...|++++ +++|++.. .+.|++-+-.|+ .-..+.... .++. ..+ .....+++.+ ++.+|++..
T Consensus 93 p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~-~~g~~~~~~---------~~P~~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 93 PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM-QPGSDQNHF---------CQPTDVAVEPSTGAVFVSDG 162 (329)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT-BCCCSTTCC---------SSEEEEEECTTTCCEEEEEC
T ss_pred ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC-CCCCCcccc---------CCCcEEEEeCCCCeEEEEeC
Confidence 45777874 66777754 456666554444 222222110 0111 001 0123467777 788999883
Q ss_pred --CCeEEEecCCCcceeeEecccc--------CCCeeeEEEEeecC-CeEEEEeC-CCcE-EEEcCCCcCcEEcccCCCc
Q 036387 239 --GGGLFLSKGTGITEEFEEVPVQ--------SRGFGILDVGYRSQ-DEAWAAGG-SGVL-LKTTNGGKTWIREKAADNI 305 (334)
Q Consensus 239 --~g~i~~S~D~G~tW~w~~~~~~--------~~~~~~~~v~~~~~-~~~~~~G~-~G~i-~~S~DgG~tW~~~~~~~~~ 305 (334)
++.|++-...|.. ...+... .......++++.++ +.+|++.. .+.| ....+.|+-=..+..+ ..
T Consensus 163 ~~~~~I~~~~~~g~~--~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~-~~ 239 (329)
T 3fvz_A 163 YCNSRIVQFSPSGKF--VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA-SF 239 (329)
T ss_dssp SSCCEEEEECTTSCE--EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT-TT
T ss_pred CCCCeEEEEcCCCCE--EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc-cc
Confidence 5667665544542 1222111 11112567888776 88998864 3444 3344545433334322 22
Q ss_pred ccceeEEEEeeCCeEEEE
Q 036387 306 AANLYSVKFINEKKGFVL 323 (334)
Q Consensus 306 ~~~l~~i~~~~~~~~~a~ 323 (334)
....+++++.+ +.+|+.
T Consensus 240 ~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 240 GRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp TTCEEEEEEET-TEEEEE
T ss_pred CCCcceeeecC-CEEEEe
Confidence 34567777765 444443
No 154
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=73.21 E-value=51 Score=29.37 Aligned_cols=144 Identities=15% Similarity=0.146 Sum_probs=63.8
Q ss_pred EEEEeCCeEEEEEcCCEEEEEc--CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEEEe
Q 036387 168 SISFKGKEGWIVGKPAILLHTS--DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFLS 245 (334)
Q Consensus 168 ~I~~~~~~~~~vG~~g~i~~S~--DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~S 245 (334)
.+...++.+|+....+.|+.=+ +|-..|+.-.... .... . ...++.+|+.+.++.++.-
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~-~~~~-----------------p-~~~~~~v~v~~~~g~l~~~ 158 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGE-ALSR-----------------P-VVSDGLVLIHTSNGQLQAL 158 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSC-CCSC-----------------C-EEETTEEEEECTTSEEEEE
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCc-eEcC-----------------C-EEECCEEEEEcCCCeEEEE
Confidence 3445568888887777565543 3445687643210 0000 0 1235667776666666543
Q ss_pred c-CCCc-ceeeEeccccCC-CeeeEEEEeecCCeEEEEeCCCcEE-EE-cCCCcCcEEcccCCCcc---cc---eeEEEE
Q 036387 246 K-GTGI-TEEFEEVPVQSR-GFGILDVGYRSQDEAWAAGGSGVLL-KT-TNGGKTWIREKAADNIA---AN---LYSVKF 314 (334)
Q Consensus 246 ~-D~G~-tW~w~~~~~~~~-~~~~~~v~~~~~~~~~~~G~~G~i~-~S-~DgG~tW~~~~~~~~~~---~~---l~~i~~ 314 (334)
. ..|+ -|+... ..+.. ........ ..++.+|+...+|.++ .. .+|-.-|+......... .. +...-.
T Consensus 159 d~~tG~~~W~~~~-~~~~~~~~~~~~~~-~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~ 236 (376)
T 3q7m_A 159 NEADGAVKWTVNL-DMPSLSLRGESAPT-TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPV 236 (376)
T ss_dssp ETTTCCEEEEEEC-CC-----CCCCCCE-EETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCE
T ss_pred ECCCCcEEEEEeC-CCCceeecCCCCcE-EECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcE
Confidence 2 3343 443322 11110 00000111 1256677755556543 23 35555687653210000 00 111111
Q ss_pred eeCCeEEEEeCCeeEEEE
Q 036387 315 INEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 315 ~~~~~~~a~G~~G~il~s 332 (334)
..++++|+.+.+|.++..
T Consensus 237 ~~~~~v~~~~~~g~l~~~ 254 (376)
T 3q7m_A 237 VVNGVVFALAYNGNLTAL 254 (376)
T ss_dssp EETTEEEEECTTSCEEEE
T ss_pred EECCEEEEEecCcEEEEE
Confidence 235777777766666544
No 155
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=72.84 E-value=45 Score=28.67 Aligned_cols=191 Identities=9% Similarity=0.022 Sum_probs=90.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce--EEEEEcCCEEEEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE--GWIVGKPAILLHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~--~~~vG~~g~i~~S~ 189 (334)
..+.+++|.| +.+.+++++.+|. ||.... ++.-.....-... ...+.++.+.+ +. ++..+..+.|..-+
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~-~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 12 DYISDIKIIP-SKSLLLITSWDGSLTVYKFDI-QAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SCEEEEEEEG-GGTEEEEEETTSEEEEEEEET-TTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCC-CCccccceeeeec----CCceEEEEECCCCCcEEEEEcCCCeEEEEE
Confidence 6799999998 5566666666675 343333 3311111100000 11477888874 44 44455566554433
Q ss_pred --CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEEEec-CC---Cccee-eEeccccC
Q 036387 190 --DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLFLSK-GT---GITEE-FEEVPVQS 261 (334)
Q Consensus 190 --DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~~S~-D~---G~tW~-w~~~~~~~ 261 (334)
+.++ -..+... .|. ..+..+.+.+ +..+++ +.++.|..-. .. +..-. .+.+..-.
T Consensus 86 ~~~~~~-~~~~~~~-----------~~~----~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 86 LIGSPS-FQALTNN-----------EAN----LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SSSSSS-EEECBSC-----------CCC----SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred eccCCc-eEecccc-----------CCC----CceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe
Confidence 3332 2222210 011 1355667766 555444 4455543211 11 00000 01111101
Q ss_pred CCeeeEEEEeecCCeEEEEeCCCcEEE-EcCC-Cc-CcEEcccCCCcccceeEEEEee-CCeEE-EEeCCeeEEE
Q 036387 262 RGFGILDVGYRSQDEAWAAGGSGVLLK-TTNG-GK-TWIREKAADNIAANLYSVKFIN-EKKGF-VLGNDGVLLQ 331 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~G~~G~i~~-S~Dg-G~-tW~~~~~~~~~~~~l~~i~~~~-~~~~~-a~G~~G~il~ 331 (334)
....+.++.+.++. +++++.+|.|.. .... ++ ....... .....+.++.+.+ ++..+ +++.+|.+..
T Consensus 149 ~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i 220 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEES--GLKYQIRDVALLPKEQEGYACSSIDGRVAV 220 (342)
T ss_dssp SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEEC--SCSSCEEEEEECSGGGCEEEEEETTSEEEE
T ss_pred eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeec--CCCCceeEEEECCCCCCEEEEEecCCcEEE
Confidence 12357788886544 666666776533 2232 32 2333333 2345789999986 55554 4567776653
No 156
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=72.68 E-value=75 Score=31.15 Aligned_cols=186 Identities=9% Similarity=-0.001 Sum_probs=88.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEEcC-
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHTSD- 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S~D- 190 (334)
..+.+++|.| +.+.++.++.+|.|.. ....|+.=.... . + ...+.+|.|.+ +..++ ++..+.|..-+-
T Consensus 431 ~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~--~-h----~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~ 502 (694)
T 3dm0_A 431 HFVEDVVLSS-DGQFALSGSWDGELRLWDLAAGVSTRRFV--G-H----TKDVLSVAFSLDNRQIVSASRDRTIKLWNTL 502 (694)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE--C-C----SSCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CcEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcceeEEe--C-C----CCCEEEEEEeCCCCEEEEEeCCCEEEEEECC
Confidence 5688999987 4455555555676432 222232111111 1 1 11477888875 44344 445554433221
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC--CEEE-EEcCCeEE-EecCCCcceeeEeccccCCCeee
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG--GLWL-LVRGGGLF-LSKGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g--~~~~-~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~ 266 (334)
+....+.... .. .|. ..+..+.+.+++ ..++ .+.++.|. +....++. ... +......+
T Consensus 503 ~~~~~~~~~~---~~-------~h~----~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~--~~~h~~~v 564 (694)
T 3dm0_A 503 GECKYTISEG---GE-------GHR----DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RST--LAGHTGYV 564 (694)
T ss_dssp SCEEEEECSS---TT-------SCS----SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEE--ECCCSSCE
T ss_pred CCcceeeccC---CC-------CCC----CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEE--EcCCCCCE
Confidence 1111211110 00 111 124456666654 2333 44455442 22222221 111 11112257
Q ss_pred EEEEeecCCeEEEE-eCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEE
Q 036387 267 LDVGYRSQDEAWAA-GGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLL 330 (334)
Q Consensus 267 ~~v~~~~~~~~~~~-G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il 330 (334)
.+++|.+++..+++ +.+|.| +.....|+ .+... .....+.++.|.+++.+++++.++.|.
T Consensus 565 ~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~---~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~i~ 626 (694)
T 3dm0_A 565 STVAVSPDGSLCASGGKDGVVLLWDLAEGK---KLYSL-EANSVIHALCFSPNRYWLCAATEHGIK 626 (694)
T ss_dssp EEEEECTTSSEEEEEETTSBCEEEETTTTE---EEECC-BCSSCEEEEEECSSSSEEEEEETTEEE
T ss_pred EEEEEeCCCCEEEEEeCCCeEEEEECCCCc---eEEEe-cCCCcEEEEEEcCCCcEEEEEcCCCEE
Confidence 88888877766665 456654 22223333 22221 123568899999888888877665544
No 157
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=72.12 E-value=47 Score=28.50 Aligned_cols=64 Identities=9% Similarity=0.014 Sum_probs=41.0
Q ss_pred eeEEEEeecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
.+.+++|.+++..+++ +.+|.|.. ... +.+.+... .....+..+.+.+++.+++++.+|.|..+
T Consensus 217 ~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~---~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~d~~i~iw 282 (340)
T 4aow_A 217 YLNTVTVSPDGSLCASGGKDGQAMLWDLN---EGKHLYTL-DGGDIINALCFSPNRYWLCAATGPSIKIW 282 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETT---TTEEEEEE-ECSSCEEEEEECSSSSEEEEEETTEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEec---cCceeeee-cCCceEEeeecCCCCceeeccCCCEEEEE
Confidence 5788888877666555 45676532 222 33443331 12356888999888889888888876543
No 158
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=71.27 E-value=81 Score=30.91 Aligned_cols=191 Identities=12% Similarity=0.055 Sum_probs=90.8
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCeEeC--cCCCCcccCcceeEEEEEEeC-CeEEEEE-cCCEEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTWAPR--SIPSAEEEDFNYRFNSISFKG-KEGWIVG-KPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW~~~--~~p~~~~~~~~~~~~~I~~~~-~~~~~vG-~~g~i~~S 188 (334)
..+++|++.|++++.++.++.++.| |.-......+... .+.. + ...+.+|.+.+ ++.++.| ..+.|..-
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h----~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-H----SHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-C----SSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-C----CCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 5688999987554455555566763 4333322222111 0100 1 11477888875 4444444 45544332
Q ss_pred c-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEE-EcCCeEEEe-cCCCcceeeEeccc-cCCCe
Q 036387 189 S-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLL-VRGGGLFLS-KGTGITEEFEEVPV-QSRGF 264 (334)
Q Consensus 189 ~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~-~~~g~i~~S-~D~G~tW~w~~~~~-~~~~~ 264 (334)
+ ..|+.=..+. .|. ..+..+.+.+++..++. +.++.|..- ..+... ...... .....
T Consensus 458 d~~~~~~~~~~~-------------~h~----~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~--~~~~~~~~~h~~ 518 (694)
T 3dm0_A 458 DLAAGVSTRRFV-------------GHT----KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK--YTISEGGEGHRD 518 (694)
T ss_dssp ETTTTEEEEEEE-------------CCS----SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE--EEECSSTTSCSS
T ss_pred ECCCCcceeEEe-------------CCC----CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc--eeeccCCCCCCC
Confidence 1 1121111111 111 13556777777765544 455554322 222221 111111 11112
Q ss_pred eeEEEEeecCC---eEEEEeCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 265 GILDVGYRSQD---EAWAAGGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~---~~~~~G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.++.|.+++ .+..++.+|.|. .....++.-..+.. -...+.++++.++++.+++ +.+|.|..+
T Consensus 519 ~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~---h~~~v~~v~~spdg~~l~sg~~Dg~i~iw 588 (694)
T 3dm0_A 519 WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG---HTGYVSTVAVSPDGSLCASGGKDGVVLLW 588 (694)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECTTSSEEEEEETTSBCEEE
T ss_pred cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC---CCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 46778886543 344445667652 22333332222221 2357899999988777665 577876544
No 159
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=70.60 E-value=51 Score=28.33 Aligned_cols=109 Identities=11% Similarity=0.098 Sum_probs=59.0
Q ss_pred eEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCe--EEEEeCCCcEEE-Ec-CCCc
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE--AWAAGGSGVLLK-TT-NGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~-S~-DgG~ 294 (334)
.|..+.|.+++..++++ .++.|. +..+.+... ............+..+.|.+++. ++.++.+|.|.. .. +.++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN-VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE-EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc-ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc
Confidence 46677888887755544 556542 222233210 00111111123577888876665 455556777643 33 4443
Q ss_pred CcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 295 TWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 295 tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
. ..+... .-...+.++.+.+++.++.++.+|.|..+
T Consensus 92 ~-~~~~~~-~~~~~v~~l~~~~~~~l~s~~~d~~i~iw 127 (342)
T 1yfq_A 92 F-QALTNN-EANLGICRICKYGDDKLIAASWDGLIEVI 127 (342)
T ss_dssp E-EECBSC-CCCSCEEEEEEETTTEEEEEETTSEEEEE
T ss_pred e-Eecccc-CCCCceEEEEeCCCCEEEEEcCCCeEEEE
Confidence 3 333320 02467899999875566667788887654
No 160
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=70.35 E-value=59 Score=29.00 Aligned_cols=205 Identities=9% Similarity=-0.035 Sum_probs=91.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEEEcCCEEEE-EcC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIVGKPAILLH-TSD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~vG~~g~i~~-S~D 190 (334)
..+.+++|.| +.+.++.++.++.|.. ..+.++.=...... ...+.++.+.+ .. ++.++..+.|.. ...
T Consensus 140 ~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 211 (420)
T 3vl1_A 140 SEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGH-------RATVTDIAIIDRGRNVLSASLDGTIRLWECG 211 (420)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECC-------SSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred CccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCC-------CCcEEEEEEcCCCCEEEEEcCCCcEEEeECC
Confidence 6789999987 4555555566675432 23333322222110 12477888885 33 444455553322 223
Q ss_pred CCCCeEEeecCCCCCCCc--ccccccC-----ccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccC
Q 036387 191 AGESWERIPLSSQLPGDM--AFWQPHN-----RAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQS 261 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~--~~~~~~~-----~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~ 261 (334)
.++.-..+.......... ..+.+.. ......+..+.+.+++..++++ .++.|. +....++. -.......
T Consensus 212 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~ 289 (420)
T 3vl1_A 212 TGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--TIQLPSKF 289 (420)
T ss_dssp TTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE--EEEECCTT
T ss_pred CCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce--eEEccccc
Confidence 333333332110000000 0000000 0001123345556777655544 455442 22223321 11221111
Q ss_pred CCeeeEEEEeecCCe-E-EEEeCCCcEE-EEcCCC-cCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 262 RGFGILDVGYRSQDE-A-WAAGGSGVLL-KTTNGG-KTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~-~-~~~G~~G~i~-~S~DgG-~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
...+..+.|.+++. . +..+.+|.|. .....+ ..-..+.. .....+..+.+.+++.++.++.+|.|..+
T Consensus 290 -~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~l~s~~~d~~v~iw 361 (420)
T 3vl1_A 290 -TCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI--NEGTPINNVYFAAGALFVSSGFDTSIKLD 361 (420)
T ss_dssp -SSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE--STTSCEEEEEEETTEEEEEETTTEEEEEE
T ss_pred -CCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc--cCCCCceEEEeCCCCEEEEecCCccEEEE
Confidence 22578888877654 4 4445567652 233333 22333332 12356777766544344445678876544
No 161
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=70.32 E-value=63 Score=29.25 Aligned_cols=72 Identities=11% Similarity=0.057 Sum_probs=40.9
Q ss_pred eeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC-----CeEEEEEcC-------
Q 036387 116 VLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG-----KEGWIVGKP------- 182 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~-----~~~~~vG~~------- 182 (334)
.-.+|+|.|+ .++|++-..|.|++=+..|+ +.+. ++.....+ ..+..|++++ +.+|+.-..
T Consensus 30 ~P~~ia~~pd--G~l~V~e~~g~I~~~d~~G~--~~~~~~~v~~~g~--~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 30 VPWSIAPLGG--GRYLVTERPGRLVLISPSGK--KLVASFDVANVGE--AGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CEEEEEEEET--TEEEEEETTTEEEEECSSCE--EEEEECCCCCSTT--CSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCeEEEEcCC--CeEEEEeCCCEEEEEeCCCc--eEeeccceeecCC--CceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 4568899874 57888776788776544455 4432 22111111 1367888875 367775432
Q ss_pred -CEEEEEcCCCC
Q 036387 183 -AILLHTSDAGE 193 (334)
Q Consensus 183 -g~i~~S~DgG~ 193 (334)
..|+|-+..+.
T Consensus 104 ~~~v~r~~~~~~ 115 (354)
T 3a9g_A 104 RNRVIRGRLDGS 115 (354)
T ss_dssp EEEEEEEEECSS
T ss_pred ceEEEEEEECCC
Confidence 56666654443
No 162
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=69.58 E-value=56 Score=28.39 Aligned_cols=103 Identities=13% Similarity=0.130 Sum_probs=53.2
Q ss_pred eeeEeecCCEEEEE-cCCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC--CC-cEEE-EcCCCcCcEE
Q 036387 224 NMGWRADGGLWLLV-RGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG--SG-VLLK-TTNGGKTWIR 298 (334)
Q Consensus 224 ~~~~~~~g~~~~~~-~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~--~G-~i~~-S~DgG~tW~~ 298 (334)
.+.+.+++.+|++. .++.|++-.-.|.. -.....+. ...++++.+++.+|++.. ++ .|++ ....|+ .+.
T Consensus 36 gia~~~~g~lyv~d~~~~~I~~~d~~g~~--~~~~~~~~---~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~-~~~ 109 (306)
T 2p4o_A 36 NLASAPDGTIFVTNHEVGEIVSITPDGNQ--QIHATVEG---KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT-VET 109 (306)
T ss_dssp EEEECTTSCEEEEETTTTEEEEECTTCCE--EEEEECSS---EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-EEE
T ss_pred eEEECCCCCEEEEeCCCCeEEEECCCCce--EEEEeCCC---CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-EEE
Confidence 45666778888887 46678765544431 11112221 456788877788888752 23 3555 334454 444
Q ss_pred cccCCCcccceeEEEEeeCCeEEEEe-CCeeEEEEc
Q 036387 299 EKAADNIAANLYSVKFINEKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 299 ~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G~il~s~ 333 (334)
+... +.......++..+++++|++- .+|.|++.+
T Consensus 110 ~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d 144 (306)
T 2p4o_A 110 LLTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLID 144 (306)
T ss_dssp EEEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred EEeC-CCccccCcccccCCCcEEEEECCCCeEEEEe
Confidence 3321 111223344444455566554 356666543
No 163
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=69.37 E-value=64 Score=28.98 Aligned_cols=175 Identities=7% Similarity=-0.041 Sum_probs=83.3
Q ss_pred eeeEEEEEecCCCCEEEEEEc-CCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEE-cCCEEEEEc
Q 036387 115 VVLLDIAFVPDDLNHGFLLGT-RQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVG-KPAILLHTS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~-~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG-~~g~i~~S~ 189 (334)
..+.++++.++ +..++.+. ++.|.. ..+.++.-....... ..+..+.+.+ +.+|+.+ ..+.|..-+
T Consensus 170 ~~v~~~~~~~~--~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 170 GFVETISIPEH--NELWVSQMQANAVHVFDLKTLAYKATVDLTG-------KWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp CEEEEEEEGGG--TEEEEEEGGGTEEEEEETTTCCEEEEEECSS-------SSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CceeEEEEcCC--CEEEEEECCCCEEEEEECCCceEEEEEcCCC-------CCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 46788899653 56666654 455432 334443322222111 1356778874 4566666 345554432
Q ss_pred -CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc---------CCeEEE-ecCCCcceeeEecc
Q 036387 190 -DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR---------GGGLFL-SKGTGITEEFEEVP 258 (334)
Q Consensus 190 -DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~---------~g~i~~-S~D~G~tW~w~~~~ 258 (334)
+.|+.-..+. .. ..+..+.+.+++..++++. ++.|+. ..+.++. .....
T Consensus 241 ~~~~~~~~~~~------~~------------~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~--~~~~~ 300 (433)
T 3bws_A 241 RKTKLEIRKTD------KI------------GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL--IDTIG 300 (433)
T ss_dssp TTTTEEEEECC------CC------------SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE--EEEEE
T ss_pred CCCCcEEEEec------CC------------CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE--Eeecc
Confidence 2332211111 10 0234566677776444332 344432 2233331 11111
Q ss_pred ccCCCeeeEEEEeecCC-eEEEEe-CCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEeC
Q 036387 259 VQSRGFGILDVGYRSQD-EAWAAG-GSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLGN 325 (334)
Q Consensus 259 ~~~~~~~~~~v~~~~~~-~~~~~G-~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~ 325 (334)
.+ .....+.|.+++ .+++++ .++.++ ...+.++.-+.+.. ...+.++++.++++ +++++.
T Consensus 301 ~~---~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 301 PP---GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPV----FDKPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp EE---ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEEC----SSSEEEEEECTTSSEEEEEEC
T ss_pred CC---CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecC----CCCCCeEEEcCCCCEEEEEec
Confidence 11 134567776655 577764 456553 33344433223322 34678899988776 454444
No 164
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=68.59 E-value=57 Score=28.09 Aligned_cols=193 Identities=11% Similarity=0.069 Sum_probs=92.0
Q ss_pred eEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CC-----eEEEEcCCCcCeEeCcCCCCcccCcceeEE
Q 036387 94 PAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQ-----TLLETKDGGKTWAPRSIPSAEEEDFNYRFN 167 (334)
Q Consensus 94 i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g-----~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~ 167 (334)
+++=+-.-.+|+.+.....+ .....++.. + +.+|++|. .+ .+++=+=.-.+|+.+..... .. ...
T Consensus 79 ~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~---~r--~~~ 149 (302)
T 2xn4_A 79 VDSYDPVKDQWTSVANMRDR-RSTLGAAVL--N-GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNT---RR--SSV 149 (302)
T ss_dssp EEEEETTTTEEEEECCCSSC-CBSCEEEEE--T-TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSS---CC--BSC
T ss_pred eEEECCCCCceeeCCCCCcc-ccceEEEEE--C-CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCC---cc--cCc
Confidence 44434445689988642222 222344444 2 67888764 21 23332334568998752111 11 111
Q ss_pred EEEEeCCeEEEEEc--------CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcC
Q 036387 168 SISFKGKEGWIVGK--------PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRG 239 (334)
Q Consensus 168 ~I~~~~~~~~~vG~--------~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~ 239 (334)
.+...++.+|++|. ...+++-+-.-.+|+.+... |... + .+ .+ ...++.+|+.+..
T Consensus 150 ~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~---p~~r-~--~~---------~~-~~~~~~iyv~GG~ 213 (302)
T 2xn4_A 150 GVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEM---STRR-S--GA---------GV-GVLNNLLYAVGGH 213 (302)
T ss_dssp EEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCC---SSCC-B--SC---------EE-EEETTEEEEECCB
T ss_pred eEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCC---cccc-c--cc---------cE-EEECCEEEEECCC
Confidence 23345778888753 12355555556789998632 2111 0 00 11 1236778887642
Q ss_pred ------CeEEEecCCCcceeeEecc-ccCCCeeeEEEEeecCCeEEEEeCC------CcEEEEcCCCcCcEEcccCCCcc
Q 036387 240 ------GGLFLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDEAWAAGGS------GVLLKTTNGGKTWIREKAADNIA 306 (334)
Q Consensus 240 ------g~i~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~~~~~G~~------G~i~~S~DgG~tW~~~~~~~~~~ 306 (334)
..+++-.-... +|+.+. .+...... .+.. -++.+|++|.. ..++.-.=.-++|+.+....+..
T Consensus 214 ~~~~~~~~~~~yd~~~~--~W~~~~~~~~~r~~~-~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~ 289 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTN--AWRQVADMNMCRRNA-GVCA-VNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTG 289 (302)
T ss_dssp SSSSBCCCEEEEETTTT--EEEEECCCSSCCBSC-EEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSC
T ss_pred CCCcccceEEEEeCCCC--CEeeCCCCCCccccC-eEEE-ECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCcc
Confidence 23443332223 456654 22211111 2222 26789988763 12444433456899987322333
Q ss_pred cceeEEEEe
Q 036387 307 ANLYSVKFI 315 (334)
Q Consensus 307 ~~l~~i~~~ 315 (334)
....+++..
T Consensus 290 r~~~~~~~~ 298 (302)
T 2xn4_A 290 RSYAGVTVI 298 (302)
T ss_dssp CBSCEEEEE
T ss_pred cccceEEEe
Confidence 344444444
No 165
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=68.25 E-value=60 Score=29.07 Aligned_cols=109 Identities=12% Similarity=0.156 Sum_probs=58.3
Q ss_pred eEeeeeEeecC-CEEEE-EcCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEE-EeCCCcEEE-EcCCCcC
Q 036387 221 RIQNMGWRADG-GLWLL-VRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWA-AGGSGVLLK-TTNGGKT 295 (334)
Q Consensus 221 ~i~~~~~~~~g-~~~~~-~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~-~G~~G~i~~-S~DgG~t 295 (334)
.+..+.+.+++ .+++. +.++.|. +....++. -..+........+.++.|.+++..++ ++.+|.|.. ....++.
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA--VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE--EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc--cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 45667787776 45554 4555543 23333331 12221011123578888876665544 455676532 2233332
Q ss_pred cEEcccCCCcccceeEEEEeeCCeEEEEe----CCeeEEEE
Q 036387 296 WIREKAADNIAANLYSVKFINEKKGFVLG----NDGVLLQY 332 (334)
Q Consensus 296 W~~~~~~~~~~~~l~~i~~~~~~~~~a~G----~~G~il~s 332 (334)
=..+... .....+..+.+.++++++++| .+|.|..+
T Consensus 211 ~~~~~~~-~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iw 250 (402)
T 2aq5_A 211 VAEKDRP-HEGTRPVHAVFVSEGKILTTGFSRMSERQVALW 250 (402)
T ss_dssp EEEEECS-SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEE
T ss_pred eeeeccC-CCCCcceEEEEcCCCcEEEEeccCCCCceEEEE
Confidence 2222111 122347889999999999987 77877654
No 166
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.99 E-value=57 Score=27.90 Aligned_cols=192 Identities=10% Similarity=0.052 Sum_probs=84.6
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE--EEEcCCCcCe-EeCc-CCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL--LETKDGGKTW-APRS-IPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i--~~S~DgG~TW-~~~~-~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S 188 (334)
..+++|+|.|++++.++-++.++.| |.-...-... .... +.. + ...+.++.|.+ +..++ .+..+.|..-
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h----~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-H----SHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-C----SSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-C----CCCEEEEEECCCCCEEEEEcccccceEE
Confidence 5799999988545554445667764 3322211111 1110 000 0 12477888875 44444 4555655443
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE-EEcCCeEEEecCCCcceeeEeccccCCCeeeE
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL-LVRGGGLFLSKGTGITEEFEEVPVQSRGFGIL 267 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~-~~~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~ 267 (334)
............. ... .+....+.+++..++ .+.++.+..-.-.+.. ... .........+.
T Consensus 114 ~~~~~~~~~~~~~---~~~-------------~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~-~~~-~~~~~~~~~v~ 175 (340)
T 4aow_A 114 DLTTGTTTRRFVG---HTK-------------DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC-KYT-VQDESHSEWVS 175 (340)
T ss_dssp ETTTTEEEEEEEC---CSS-------------CEEEEEECTTSSCEEEEETTSCEEEECTTSCE-EEE-ECSSSCSSCEE
T ss_pred eecccceeeeecC---CCC-------------ceeEEEEeecCccceeecCCCeEEEEEeCCCc-eEE-EEeccccCccc
Confidence 3332222221111 000 111223344444433 3444444322211110 111 11111112345
Q ss_pred EEEeec--CCeEEE-EeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 268 DVGYRS--QDEAWA-AGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 268 ~v~~~~--~~~~~~-~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.|.. ...+++ .+.++.|.. ....+ +.+..-..-...+.+|+|.++++.+++ +.+|.|..+
T Consensus 176 ~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 176 CVRFSPNSSNPIIVSCGWDKLVKVWNLANC---KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 242 (340)
T ss_dssp EEEECSCSSSCEEEEEETTSCEEEEETTTT---EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred ceEEccCCCCcEEEEEcCCCEEEEEECCCC---ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 555543 234444 345666532 22223 332221122357899999887776664 578877654
No 167
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=67.29 E-value=76 Score=29.05 Aligned_cols=62 Identities=6% Similarity=0.075 Sum_probs=38.7
Q ss_pred eeeEEEEeec--CC--eEEEEeCC-----CcEEEEcCCCcCcEEcccCC-CcccceeEEEEeeCCeEEEEeC
Q 036387 264 FGILDVGYRS--QD--EAWAAGGS-----GVLLKTTNGGKTWIREKAAD-NIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 264 ~~~~~v~~~~--~~--~~~~~G~~-----G~i~~S~DgG~tW~~~~~~~-~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
+...++.+.. ++ .+|++... -.+|+..-+++....+...+ ..-....++++.+++++|+.+.
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~ 183 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATND 183 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEES
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCC
Confidence 3456666543 34 57777432 24777766666666655422 2235688999999999988754
No 168
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=66.92 E-value=69 Score=28.40 Aligned_cols=198 Identities=9% Similarity=0.084 Sum_probs=90.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcC----eEeCcCCCCcccCcceeEEEEEEeC--CeEEEEE-cCCEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKT----WAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVG-KPAILL 186 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~T----W~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG-~~g~i~ 186 (334)
..+.++.|.|++.+.++..+.+|.|.. ..+.++. +......... .....+.++.+.+ ...++.+ ..+.|.
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg~v~ 191 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSM--SSVDEVISLAWNQSLAHVFASAGSSNFAS 191 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSC--CSSCCCCEEEECSSCTTEEEEESSSSCEE
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccccc--CCCCCeeEEEeCCCCCcEEEEEcCCCCEE
Confidence 578899998743555555555666433 2222220 0011110000 0112467788874 3455554 444332
Q ss_pred E-EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecC-CEEEEE-cCC---e--EEEecCCCcceeeEecc
Q 036387 187 H-TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADG-GLWLLV-RGG---G--LFLSKGTGITEEFEEVP 258 (334)
Q Consensus 187 ~-S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g-~~~~~~-~~g---~--i~~S~D~G~tW~w~~~~ 258 (334)
. ..+.++.=..+... ... ..+ ...+..+.+.+++ .+++++ .++ . +|-...+.+. .. .
T Consensus 192 iwd~~~~~~~~~~~~~----~~~---~~~----~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~--~~--~ 256 (416)
T 2pm9_A 192 IWDLKAKKEVIHLSYT----SPN---SGI----KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP--LQ--T 256 (416)
T ss_dssp EEETTTTEEEEEECCC----CCS---SCC----CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC--SB--C
T ss_pred EEECCCCCcceEEecc----ccc---ccc----CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC--cE--E
Confidence 2 22233222222111 000 000 1235667787776 455544 333 3 3322222221 01 1
Q ss_pred cc-CCCeeeEEEEeec-CCeEEE-EeCCCcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCC-eEEEE-eCCeeEEEE
Q 036387 259 VQ-SRGFGILDVGYRS-QDEAWA-AGGSGVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEK-KGFVL-GNDGVLLQY 332 (334)
Q Consensus 259 ~~-~~~~~~~~v~~~~-~~~~~~-~G~~G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~-~~~a~-G~~G~il~s 332 (334)
.. .....+..+.|.+ ++..++ ++.+|.|..- .+.++.-..+.. ....+.+++|.+++ ..+++ +.+|.|..+
T Consensus 257 ~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw 333 (416)
T 2pm9_A 257 LNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA---RGNWCFKTKFAPEAPDLFACASFDNKIEVQ 333 (416)
T ss_dssp CCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC---SSSCCCCEEECTTCTTEEEECCSSSEEEEE
T ss_pred eecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC---CCCceEEEEECCCCCCEEEEEecCCcEEEE
Confidence 11 1123578888876 555444 4556765332 233332222222 23578899998876 55555 567776543
No 169
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=66.32 E-value=68 Score=33.11 Aligned_cols=103 Identities=7% Similarity=0.052 Sum_probs=57.8
Q ss_pred eEeeeeEeecCCEEEEEc-CCeEEE-ecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcE-EEEcCCCcCcE
Q 036387 221 RIQNMGWRADGGLWLLVR-GGGLFL-SKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVL-LKTTNGGKTWI 297 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~-~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i-~~S~DgG~tW~ 297 (334)
.+..+.|.+++.+++++. ++.|.. ..+.++ ... ..+. ...+..++|.++..++.++.++.| +...+.|+.=.
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~---~~~-~~~~-~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~ 93 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVE---VVI-KLED-RSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLT 93 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCE---EEE-ECSS-CCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEE
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcE---EEE-EcCC-CCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEE
Confidence 466788889888777654 555533 222222 111 1111 235788999873334555666765 33334443222
Q ss_pred EcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 298 REKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.. ...+.+++|.+++..+++ +.+|.|..+
T Consensus 94 ~~~~----~~~V~~v~~sp~g~~l~sgs~dg~V~lw 125 (902)
T 2oaj_A 94 TVFV----PGKITSIDTDASLDWMLIGLQNGSMIVY 125 (902)
T ss_dssp EEEC----SSCEEEEECCTTCSEEEEEETTSCEEEE
T ss_pred EEcC----CCCEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 2222 246889999887776655 578877654
No 170
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.21 E-value=73 Score=27.73 Aligned_cols=103 Identities=7% Similarity=-0.026 Sum_probs=53.9
Q ss_pred eeEeecCC-EEEEEc-CCeEEEec-CCCcceeeEec-cccCCCeeeEEEEeecCCeEEEEeCC-----------CcEEEE
Q 036387 225 MGWRADGG-LWLLVR-GGGLFLSK-GTGITEEFEEV-PVQSRGFGILDVGYRSQDEAWAAGGS-----------GVLLKT 289 (334)
Q Consensus 225 ~~~~~~g~-~~~~~~-~g~i~~S~-D~G~tW~w~~~-~~~~~~~~~~~v~~~~~~~~~~~G~~-----------G~i~~S 289 (334)
+.+.+++. +|++.. .+.|++-. +++..-+.+.. ..+ + ..++++..++.+|++... +.|++-
T Consensus 190 ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~--g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~ 265 (322)
T 2fp8_A 190 AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP--N--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKF 265 (322)
T ss_dssp EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS--S--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEE
T ss_pred eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC--C--CCCeEECCCCCEEEEecCcccccccCCCccEEEEE
Confidence 45667776 777653 35665533 32210011211 111 1 345666777789987432 445555
Q ss_pred cCCCcCcEEcccCCCc-ccceeEEEEeeCCeEEEEe-CCeeEEEE
Q 036387 290 TNGGKTWIREKAADNI-AANLYSVKFINEKKGFVLG-NDGVLLQY 332 (334)
Q Consensus 290 ~DgG~tW~~~~~~~~~-~~~l~~i~~~~~~~~~a~G-~~G~il~s 332 (334)
.-.|+.-+.+..+.+. ......+.+ .++++|+++ .++.|.+.
T Consensus 266 d~~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 266 DEFGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp CTTSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred CCCCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEE
Confidence 4457666666553221 234555655 578999885 34455544
No 171
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=64.09 E-value=70 Score=27.53 Aligned_cols=195 Identities=14% Similarity=0.079 Sum_probs=92.7
Q ss_pred eeeEEEEEecC---CCCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeCC-----eEEEE-EcCC
Q 036387 115 VVLLDIAFVPD---DLNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGK-----EGWIV-GKPA 183 (334)
Q Consensus 115 ~~l~~I~~~p~---d~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~-----~~~~v-G~~g 183 (334)
..+.+|+|.|. ....+++.+..+. ||.... ++.-..+..-.. ......+.++.+.++ ..+++ +..+
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~-~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg 95 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHS-QGEIRLLQSYVD--ADADENFYTCAWTYDSNTSHPLLAVAGSRG 95 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECG-GGCEEEEEEEEC--SCTTCCEEEEEEEECTTTCCEEEEEEETTC
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCC-CcEEEeeeeccc--cCCCCcEEEEEeccCCCCCCCEEEEecCCC
Confidence 57999999873 2344566665664 444333 333332221000 001124778887632 34444 4555
Q ss_pred EEEEEc-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEEEE-cCCeEE-EecCCCcceeeEecc-
Q 036387 184 ILLHTS-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWLLV-RGGGLF-LSKGTGITEEFEEVP- 258 (334)
Q Consensus 184 ~i~~S~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~- 258 (334)
.|..-+ +.++.=..+. .| ...+..+.+.+ ++.+++++ .++.|. +..+.++. .....
T Consensus 96 ~i~v~d~~~~~~~~~~~-------------~~----~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~--~~~~~~ 156 (366)
T 3k26_A 96 IIRIINPITMQCIKHYV-------------GH----GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL--VAIFGG 156 (366)
T ss_dssp EEEEECTTTCCEEEEEE-------------SC----CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE--EEEECS
T ss_pred EEEEEEchhceEeeeec-------------CC----CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE--EEEecc
Confidence 444332 2222211111 11 11356677777 66665554 455543 23333431 12211
Q ss_pred ccCCCeeeEEEEeecCCeEEE-EeCCCcEEE-EcCCCcCcEEccc-------------------------CCCcccceeE
Q 036387 259 VQSRGFGILDVGYRSQDEAWA-AGGSGVLLK-TTNGGKTWIREKA-------------------------ADNIAANLYS 311 (334)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~~~~-~G~~G~i~~-S~DgG~tW~~~~~-------------------------~~~~~~~l~~ 311 (334)
.......+.++.|.+++..++ ++.+|.|.. ..+.++.-..+.. .......+.+
T Consensus 157 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 236 (366)
T 3k26_A 157 VEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDC 236 (366)
T ss_dssp TTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCE
T ss_pred cccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEE
Confidence 112223678888877665544 455676532 2232221111110 0002356888
Q ss_pred EEEeeCCeEEEEeCCeeEEEE
Q 036387 312 VKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 312 i~~~~~~~~~a~G~~G~il~s 332 (334)
+.+. ++.++.++.+|.|..+
T Consensus 237 ~~~~-~~~l~~~~~d~~i~~w 256 (366)
T 3k26_A 237 VRWL-GDLILSKSCENAIVCW 256 (366)
T ss_dssp EEEE-TTEEEEECSSSEEEEE
T ss_pred EEEc-CCEEEEEecCCEEEEE
Confidence 8887 5666667788877654
No 172
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=63.99 E-value=77 Score=27.94 Aligned_cols=193 Identities=11% Similarity=0.044 Sum_probs=87.2
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-Ce-EEEE-EcCCEEEE--Ec
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KE-GWIV-GKPAILLH--TS 189 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~-~~~v-G~~g~i~~--S~ 189 (334)
..+.+++|.| +.+.++.++.++.|..=+=.++.-....... ..+.+|.+.+ +. .++. +..+.|.. ..
T Consensus 164 ~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~-------~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 235 (383)
T 3ei3_B 164 YWYCCVDVSV-SRQMLATGDSTGRLLLLGLDGHEIFKEKLHK-------AKVTHAEFNPRCDWLMATSSVDATVKLWDLR 235 (383)
T ss_dssp CCEEEEEEET-TTTEEEEEETTSEEEEEETTSCEEEEEECSS-------SCEEEEEECSSCTTEEEEEETTSEEEEEEGG
T ss_pred CCeEEEEECC-CCCEEEEECCCCCEEEEECCCCEEEEeccCC-------CcEEEEEECCCCCCEEEEEeCCCEEEEEeCC
Confidence 5688999998 5566665566676533111222222211111 1477888875 33 4444 44554332 12
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEEEE-cCCeEE-EecCCCcc-eeeEeccccC----
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWLLV-RGGGLF-LSKGTGIT-EEFEEVPVQS---- 261 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~-~~g~i~-~S~D~G~t-W~w~~~~~~~---- 261 (334)
.....-+.+. ...|. ..+..+.+.+ ++..++++ .++.|. +..+.++. -.........
T Consensus 236 ~~~~~~~~~~-----------~~~~~----~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 236 NIKDKNSYIA-----------EMPHE----KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL 300 (383)
T ss_dssp GCCSTTCEEE-----------EEECS----SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred CCCcccceEE-----------EecCC----CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence 1110001100 00111 2356677777 77765554 445442 22222221 0111100000
Q ss_pred C--------CeeeEEEEeecCCeEEEEeCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 262 R--------GFGILDVGYRSQDEAWAAGGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 262 ~--------~~~~~~v~~~~~~~~~~~G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
. ...+..+.+.+++.. .++.+|.| +.....|+.-..+... .....+..++|.++++.+++|.+|.|..+
T Consensus 301 ~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~-~~~~~~~~~~~s~~g~~l~s~sd~~i~iw 378 (383)
T 3ei3_B 301 TPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDP-NAAGIISLNKFSPTGDVLASGMGFNILIW 378 (383)
T ss_dssp CCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBT-TBCSCCCEEEECTTSSEEEEEETTEEEEE
T ss_pred cceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCC-CCCceEEEEEEecCccEEEEecCCcEEEE
Confidence 0 012333444444433 32345654 2233334433333321 11234556689888888888888887655
No 173
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=63.77 E-value=88 Score=28.53 Aligned_cols=119 Identities=12% Similarity=0.122 Sum_probs=62.0
Q ss_pred eeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCc-CCCC-cccCcceeEEEEEEeC-----CeEEEE---EcCCE
Q 036387 116 VLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRS-IPSA-EEEDFNYRFNSISFKG-----KEGWIV---GKPAI 184 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~-~p~~-~~~~~~~~~~~I~~~~-----~~~~~v---G~~g~ 184 (334)
.-.+|+|.|+ .++|+.-. .|.|++=++.+..-+.+. +|.. ...+ ..+..|++++ +.+|+. .....
T Consensus 33 ~P~~ia~~pd--G~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~--~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 33 SPWGLAPLPG--GDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGE--GGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp SEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTT--BSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CceEEEEcCC--CcEEEEEecCCEEEEEECCCCcEeeecccCceeecCC--CCceeeEeccccccCCEEEEEEecCCCCE
Confidence 3467889874 46776655 677776554332334332 2211 1111 2467888874 456664 23456
Q ss_pred EEEEcCCC-----CC---eEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc--------------CCeE
Q 036387 185 LLHTSDAG-----ES---WERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR--------------GGGL 242 (334)
Q Consensus 185 i~~S~DgG-----~T---W~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~--------------~g~i 242 (334)
|+|-+..+ .. .+.+-.. +|.. ..|+. ..+.|.+||.+|+... .|.|
T Consensus 109 v~R~~~~~~~~~~~~~~~~~~i~~~--~p~~----~~H~g------~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~I 176 (347)
T 3das_A 109 IVRMLYDEKKPSGEQLGAPDTVFRG--IPKG----VIHNG------GRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKI 176 (347)
T ss_dssp EEEEEBCTTSCTTCCBCCCEEEEEE--ECCC----SSCCC------CCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCE
T ss_pred EEEEEeCCCCcccccCCCcEEEEEc--CCCC----CCccC------ccccCCCCCCEEEEECCCCCCccccCCCCCCCEE
Confidence 77765544 12 3332211 1211 11221 2366778889998742 3677
Q ss_pred EEecCCCc
Q 036387 243 FLSKGTGI 250 (334)
Q Consensus 243 ~~S~D~G~ 250 (334)
+|-..+|.
T Consensus 177 lRi~~dG~ 184 (347)
T 3das_A 177 LRMTPDGE 184 (347)
T ss_dssp EEECTTSS
T ss_pred EEEeCCCC
Confidence 77766554
No 174
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=63.56 E-value=70 Score=27.30 Aligned_cols=191 Identities=10% Similarity=0.087 Sum_probs=90.2
Q ss_pred eeEEEEEecCCCCEEEEEEc-CCe--EEEEcCCCcCeEeCcC-CCCcccCcceeEEEEEEeC--CeEEEEE-cCCEEEE-
Q 036387 116 VLLDIAFVPDDLNHGFLLGT-RQT--LLETKDGGKTWAPRSI-PSAEEEDFNYRFNSISFKG--KEGWIVG-KPAILLH- 187 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~-~g~--i~~S~DgG~TW~~~~~-p~~~~~~~~~~~~~I~~~~--~~~~~vG-~~g~i~~- 187 (334)
....+++.| +.+.+|+++. .+. ++... .|.+.+.+.. +... ....+.+.+ +.+|+.. ..+.|..
T Consensus 85 ~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~-~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~v~~~ 156 (343)
T 1ri6_A 85 SLTHISTDH-QGQFVFVGSYNAGNVSVTRLE-DGLPVGVVDVVEGLD------GCHSANISPDNRTLWVPALKQDRICLF 156 (343)
T ss_dssp CCSEEEECT-TSSEEEEEETTTTEEEEEEEE-TTEEEEEEEEECCCT------TBCCCEECTTSSEEEEEEGGGTEEEEE
T ss_pred CCcEEEEcC-CCCEEEEEecCCCeEEEEECC-CCccccccccccCCC------CceEEEECCCCCEEEEecCCCCEEEEE
Confidence 567888987 5566777665 443 44433 4554443321 1110 244566764 4566655 3443332
Q ss_pred -EcCCCCCeEEee--cCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEE-cCCeE--EEec-CCCccee-eEecc
Q 036387 188 -TSDAGESWERIP--LSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLV-RGGGL--FLSK-GTGITEE-FEEVP 258 (334)
Q Consensus 188 -S~DgG~TW~~~~--~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~-~~g~i--~~S~-D~G~tW~-w~~~~ 258 (334)
....| +.+.+. .. ..+.. .....+.+.+++. +|++. .++.+ |... +.|+ +. .....
T Consensus 157 d~~~~~-~~~~~~~~~~-~~~~~------------~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~-~~~~~~~~ 221 (343)
T 1ri6_A 157 TVSDDG-HLVAQDPAEV-TTVEG------------AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGN-IECVQTLD 221 (343)
T ss_dssp EECTTS-CEEEEEEEEE-ECSTT------------CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSC-CEEEEEEE
T ss_pred EecCCC-ceeeeccccc-ccCCC------------CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-EEEEeecc
Confidence 33223 343222 10 00000 0123466778887 55555 34444 3222 1232 11 11111
Q ss_pred -ccCC---CeeeEEEEeecCC-eEEEEe-CCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEe-CCee
Q 036387 259 -VQSR---GFGILDVGYRSQD-EAWAAG-GSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLG-NDGV 328 (334)
Q Consensus 259 -~~~~---~~~~~~v~~~~~~-~~~~~G-~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G-~~G~ 328 (334)
.+.. .....+++|.+++ .+|++. .++.+ |...+.+.+++.+... ........+++.++++ +|+++ .+|.
T Consensus 222 ~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 222 MMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQ-PTETQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp CSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEE-ECSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred ccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeee-cCCCccceEEECCCCCEEEEecCCCCe
Confidence 2211 1234567787665 566555 34543 4444445566666442 1223477889987776 55555 3465
Q ss_pred EE
Q 036387 329 LL 330 (334)
Q Consensus 329 il 330 (334)
+.
T Consensus 301 v~ 302 (343)
T 1ri6_A 301 IS 302 (343)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 175
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=63.47 E-value=79 Score=27.92 Aligned_cols=50 Identities=10% Similarity=0.204 Sum_probs=27.3
Q ss_pred CCeEEEEeCC-------CcEEEE-c-CCCcCcEEcccCCCcccc--eeEEEEeeCCeEEEEeC
Q 036387 274 QDEAWAAGGS-------GVLLKT-T-NGGKTWIREKAADNIAAN--LYSVKFINEKKGFVLGN 325 (334)
Q Consensus 274 ~~~~~~~G~~-------G~i~~S-~-DgG~tW~~~~~~~~~~~~--l~~i~~~~~~~~~a~G~ 325 (334)
++.+|++|.. ..++.- . -...+|+.+... +.+.. -.++.. -++++|++|.
T Consensus 200 ~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~-~~~~iyv~GG 260 (357)
T 2uvk_A 200 GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGI-SNDSLIFAGG 260 (357)
T ss_dssp TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS-STTTCCBSCEEEE-ETTEEEEECC
T ss_pred CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC-CCCcccccceEEE-ECCEEEEEcC
Confidence 6789998752 234322 1 145689998653 22222 222333 3678999986
No 176
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=63.38 E-value=72 Score=27.42 Aligned_cols=203 Identities=10% Similarity=0.046 Sum_probs=91.3
Q ss_pred cCCCCCcEEcccCCCCCeeeEEEEEecCC--CCEEEEEEcCCe--EEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC
Q 036387 98 EEALSAWERVYIPVDPGVVLLDIAFVPDD--LNHGFLLGTRQT--LLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG 173 (334)
Q Consensus 98 ~DgG~tW~~~~~p~~~~~~l~~I~~~p~d--~~~~~avG~~g~--i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~ 173 (334)
.|.-..++.+.........+.+|+|.|++ .+.++.++.+|. ||...+.+..-....... ...+.++.+.+
T Consensus 23 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~ 96 (368)
T 3mmy_A 23 TDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH------TGPVLDVCWSD 96 (368)
T ss_dssp CCSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC------SSCEEEEEECT
T ss_pred cCCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc------cCCEEEEEECc
Confidence 44444444443322334689999998732 234444455665 444444343321111111 11477888875
Q ss_pred -CeEEE-EEcCCEEEEE-cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeE--eecCCEEEE-EcCCeEEEe-c
Q 036387 174 -KEGWI-VGKPAILLHT-SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGW--RADGGLWLL-VRGGGLFLS-K 246 (334)
Q Consensus 174 -~~~~~-vG~~g~i~~S-~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~--~~~g~~~~~-~~~g~i~~S-~ 246 (334)
+..++ ++..+.|..- .+.++.-+ +. .|. ..+..+.+ .+++..+++ +.++.|..- .
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~-~~-------------~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~ 158 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQ-IA-------------QHD----APVKTIHWIKAPNYSCVMTGSWDKTLKFWDT 158 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEE-EE-------------ECS----SCEEEEEEEECSSCEEEEEEETTSEEEEECS
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCcee-ec-------------ccc----CceEEEEEEeCCCCCEEEEccCCCcEEEEEC
Confidence 44444 4455544332 22222111 11 011 13455666 566664444 445554322 2
Q ss_pred CCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeCCCcE--EEEcCCCcCcEEcccCCCcccceeEEEEeeCCe-----
Q 036387 247 GTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGGSGVL--LKTTNGGKTWIREKAADNIAANLYSVKFINEKK----- 319 (334)
Q Consensus 247 D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i--~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~----- 319 (334)
..++. ......+. ....+.+. .+.++++..++.+ |........++.+... .......+.+.....
T Consensus 159 ~~~~~--~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 230 (368)
T 3mmy_A 159 RSSNP--MMVLQLPE---RCYCADVI-YPMAVVATAERGLIVYQLENQPSEFRRIESP--LKHQHRCVAIFKDKQNKPTG 230 (368)
T ss_dssp SCSSC--SEEEECSS---CEEEEEEE-TTEEEEEEGGGCEEEEECSSSCEEEEECCCS--CSSCEEEEEEEECTTSCEEE
T ss_pred CCCcE--EEEEecCC---CceEEEec-CCeeEEEeCCCcEEEEEeccccchhhhcccc--ccCCCceEEEcccCCCCCCe
Confidence 22321 11122221 34455554 3455555555543 4444444455555542 223344444433222
Q ss_pred EEEEeCCeeEEEE
Q 036387 320 GFVLGNDGVLLQY 332 (334)
Q Consensus 320 ~~a~G~~G~il~s 332 (334)
+++.+.+|.+..+
T Consensus 231 ~~~~~~dg~i~i~ 243 (368)
T 3mmy_A 231 FALGSIEGRVAIH 243 (368)
T ss_dssp EEEEETTSEEEEE
T ss_pred EEEecCCCcEEEE
Confidence 6666788876543
No 177
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=63.00 E-value=76 Score=27.54 Aligned_cols=191 Identities=9% Similarity=0.079 Sum_probs=96.8
Q ss_pred eeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeE--EEEcCCCcCeE--eCcCC
Q 036387 81 SISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTL--LETKDGGKTWA--PRSIP 155 (334)
Q Consensus 81 g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i--~~S~DgG~TW~--~~~~p 155 (334)
+.+|++.+. ++.|++=+=.|+-++.+..... ..+-+|++.++ +..+++.+ .+.+ +...+.+.-|. ....+
T Consensus 39 ~~L~aV~d~-~~~I~~ld~~g~v~~~i~l~g~--~D~EGIa~~~~--g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~ 113 (255)
T 3qqz_A 39 NTLFSTINK-PAAIVEMTTNGDLIRTIPLDFV--KDLETIEYIGD--NQFVISDERDYAIYVISLTPNSEVKILKKIKIP 113 (255)
T ss_dssp TEEEEEEET-TEEEEEEETTCCEEEEEECSSC--SSEEEEEECST--TEEEEEETTTTEEEEEEECTTCCEEEEEEEECC
T ss_pred CEEEEEECC-CCeEEEEeCCCCEEEEEecCCC--CChHHeEEeCC--CEEEEEECCCCcEEEEEcCCCCeeeeeeeeccc
Confidence 556777665 4556553333888887754332 56888998742 55555543 2333 33344443352 22222
Q ss_pred CCcccCcceeEEEEEEeC--CeEEEEEcC--CEEEEEcC--CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee
Q 036387 156 SAEEEDFNYRFNSISFKG--KEGWIVGKP--AILLHTSD--AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA 229 (334)
Q Consensus 156 ~~~~~~~~~~~~~I~~~~--~~~~~vG~~--g~i~~S~D--gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~ 229 (334)
.. ..+.+.-+.+|++++ +++|++.+. ..||+-+. .++.-+.+.. ..+-... ....+..+.+.+
T Consensus 114 ~~-~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~-------~~~~~~~---~~~d~S~l~~dp 182 (255)
T 3qqz_A 114 LQ-ESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD-------KALQRQF---TLDDVSGAEFNQ 182 (255)
T ss_dssp CS-SCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC-------HHHHHTC---CSSCCCEEEEET
T ss_pred cc-cccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecc-------hhhcccc---ccCCceeEEEcC
Confidence 11 111234578899885 589988653 36766651 1111111110 0000000 001234455654
Q ss_pred -cCCEEEEEcCC-eEEEecCCCcceeeEeccccCC-------CeeeEEEEeecCCeEEEEeCCCcEEEE
Q 036387 230 -DGGLWLLVRGG-GLFLSKGTGITEEFEEVPVQSR-------GFGILDVGYRSQDEAWAAGGSGVLLKT 289 (334)
Q Consensus 230 -~g~~~~~~~~g-~i~~S~D~G~tW~w~~~~~~~~-------~~~~~~v~~~~~~~~~~~G~~G~i~~S 289 (334)
.+.+|+..... .++.-...|+- -....+... ....-+|+|.+++.+|++.....+|+-
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~g~~--~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLVGEV--IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTTCCE--EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCCCCE--EEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 45678777544 45555555652 122222211 012357888888889999877666654
No 178
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=62.97 E-value=86 Score=28.16 Aligned_cols=142 Identities=8% Similarity=0.024 Sum_probs=72.2
Q ss_pred EEEEEEeC-CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec----CCEEEEEcC-
Q 036387 166 FNSISFKG-KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD----GGLWLLVRG- 239 (334)
Q Consensus 166 ~~~I~~~~-~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~----g~~~~~~~~- 239 (334)
-..|.+.+ .++|++-..+.|++=+| |+ .+.+... + .+... ......+++.++ +.+|++...
T Consensus 33 P~~ia~~pdG~l~V~e~~g~I~~i~~-g~-~~~~~~~---~---v~~~g-----~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 33 PWALAFLPDGGMLIAERPGRIRLFRE-GR-LSTYAEL---S---VYHRG-----ESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp EEEEEECTTSCEEEEETTTEEEEEET-TE-EEEEEEC---C---CCCST-----TCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred ceEEEEcCCCeEEEEeCCCeEEEEEC-CC-ccEeecc---e---EeecC-----CCCceeEEECCCCCCCCEEEEEEecC
Confidence 35677775 67777766688877664 33 3443321 1 00000 012334666665 567776542
Q ss_pred -----CeEEEecCCCccee-eEec--ccc--C-CCeeeEEEEeecCCeEEEEe-C-------------CCcEEEEcCCCc
Q 036387 240 -----GGLFLSKGTGITEE-FEEV--PVQ--S-RGFGILDVGYRSQDEAWAAG-G-------------SGVLLKTTNGGK 294 (334)
Q Consensus 240 -----g~i~~S~D~G~tW~-w~~~--~~~--~-~~~~~~~v~~~~~~~~~~~G-~-------------~G~i~~S~DgG~ 294 (334)
..|++-+..+.+.. .+.+ .++ . .......++|.+++.+|++- . .|.|+|-.-+|+
T Consensus 100 ~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~ 179 (352)
T 2ism_A 100 EGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGE 179 (352)
T ss_dssp TTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSS
T ss_pred CCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCC
Confidence 56766554432211 1111 123 1 11123467777778888863 2 156776554441
Q ss_pred -------------CcEEcccCCCcccceeEEEEee-CCeEEEE
Q 036387 295 -------------TWIREKAADNIAANLYSVKFIN-EKKGFVL 323 (334)
Q Consensus 295 -------------tW~~~~~~~~~~~~l~~i~~~~-~~~~~a~ 323 (334)
..+.+.. + ..+-+.+++.+ ++++|++
T Consensus 180 ~p~~npf~~~~~~~~~i~a~--G-~rnp~g~a~d~~~g~l~v~ 219 (352)
T 2ism_A 180 PAPGNPFLGRRGARPEVYSL--G-HRNPQGLAWHPKTGELFSS 219 (352)
T ss_dssp BCTTCTTTTCTTSCTTEEEE--C-CSEECCCEECTTTCCEEEE
T ss_pred CCCCCcccCCCCCCccEEEE--c-CCCcccEEEECCCCCEEEE
Confidence 2222222 1 24567788877 6788876
No 179
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=62.83 E-value=70 Score=27.71 Aligned_cols=108 Identities=10% Similarity=0.080 Sum_probs=54.3
Q ss_pred eEeeeeEeecCCEEEEE-cCCeE--EEecCCCcceeeEeccccCCCeeeEEEEeec---CCeEEEEeCCCcEEEEcCCCc
Q 036387 221 RIQNMGWRADGGLWLLV-RGGGL--FLSKGTGITEEFEEVPVQSRGFGILDVGYRS---QDEAWAAGGSGVLLKTTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~-~~g~i--~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~---~~~~~~~G~~G~i~~S~DgG~ 294 (334)
.+..+.|.+++..++.+ .++.| |-...+.. ... ..+......+.+++|.+ ++.+..++.++.|..-.-...
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~--~~~-~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~ 91 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ--ILI-ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENG 91 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEE--EEE-EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSS
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc--EEE-EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCC
Confidence 35667788888766654 44543 32222211 001 11111122578888853 334444566776533221122
Q ss_pred CcEEcccCCCcccceeEEEEeeC--CeEEEE-eCCeeEEE
Q 036387 295 TWIREKAADNIAANLYSVKFINE--KKGFVL-GNDGVLLQ 331 (334)
Q Consensus 295 tW~~~~~~~~~~~~l~~i~~~~~--~~~~a~-G~~G~il~ 331 (334)
.|+.+.....-...+.+++|.++ +..+++ +.+|.|..
T Consensus 92 ~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 92 TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 35444321122357889999875 555554 56776553
No 180
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=62.41 E-value=75 Score=27.28 Aligned_cols=68 Identities=16% Similarity=0.161 Sum_probs=39.2
Q ss_pred eeEEEEeecCCe-EEEE-eCCCcE--EEEcCCCc---------------CcEEcccCCCcccceeEEEEeeCCeEEE--E
Q 036387 265 GILDVGYRSQDE-AWAA-GGSGVL--LKTTNGGK---------------TWIREKAADNIAANLYSVKFINEKKGFV--L 323 (334)
Q Consensus 265 ~~~~v~~~~~~~-~~~~-G~~G~i--~~S~DgG~---------------tW~~~~~~~~~~~~l~~i~~~~~~~~~a--~ 323 (334)
.+..+.|.+++. .+++ +.+|.| |....+.. +++.+..-..-...+.+++|.++++.++ +
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~ 340 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCS 340 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEE
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEe
Confidence 578888887665 4444 556654 43332221 1233322111235789999988777554 5
Q ss_pred eCCeeEEEE
Q 036387 324 GNDGVLLQY 332 (334)
Q Consensus 324 G~~G~il~s 332 (334)
+.+|.|.-+
T Consensus 341 ~~d~~i~iw 349 (357)
T 3i2n_A 341 SFDQTVRVL 349 (357)
T ss_dssp ETTSEEEEE
T ss_pred cCCCcEEEE
Confidence 678887654
No 181
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=62.04 E-value=74 Score=27.12 Aligned_cols=193 Identities=9% Similarity=0.057 Sum_probs=89.2
Q ss_pred eeeEEEEEecCCCCEEEEEEcC-CeEEE-EcC-CCcCeEeCc-CCCCcccCcceeEEEEEEeC--CeEEEEEc-CC--EE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTR-QTLLE-TKD-GGKTWAPRS-IPSAEEEDFNYRFNSISFKG--KEGWIVGK-PA--IL 185 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~-g~i~~-S~D-gG~TW~~~~-~p~~~~~~~~~~~~~I~~~~--~~~~~vG~-~g--~i 185 (334)
.....++|.| |.+.+++++.. +.|.. ..| .+.+++.+. .+... ....+.+.+ +.+|+.+. .+ .+
T Consensus 38 ~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 38 GQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG------SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp SCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS------CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC------CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 3567789987 55667776654 55432 233 233455432 11110 234566764 44666654 33 34
Q ss_pred EEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEE-cCCeEEE--ecCCCcceeeE--eccc
Q 036387 186 LHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLV-RGGGLFL--SKGTGITEEFE--EVPV 259 (334)
Q Consensus 186 ~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~-~~g~i~~--S~D~G~tW~w~--~~~~ 259 (334)
|... .|++.+.+... +... .+..+.+.+++. +|++. .++.|+. ....|+--... ....
T Consensus 111 ~d~~-~~~~~~~~~~~---~~~~------------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 111 TRLE-DGLPVGVVDVV---EGLD------------GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEE-TTEEEEEEEEE---CCCT------------TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EECC-CCccccccccc---cCCC------------CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 4443 45555544321 1110 123356677776 55554 4455432 33324310111 1122
Q ss_pred cCCCeeeEEEEeecCCe-EEEEe-CCCcEE-EEcC-CCcCcEEc---cc-CCC--cccceeEEEEeeCCe-EEEEe-CCe
Q 036387 260 QSRGFGILDVGYRSQDE-AWAAG-GSGVLL-KTTN-GGKTWIRE---KA-ADN--IAANLYSVKFINEKK-GFVLG-NDG 327 (334)
Q Consensus 260 ~~~~~~~~~v~~~~~~~-~~~~G-~~G~i~-~S~D-gG~tW~~~---~~-~~~--~~~~l~~i~~~~~~~-~~a~G-~~G 327 (334)
+. +.....++|.+++. +|+++ ..+.+. ...| ....++.. .. +.. ......++++.++++ +|+++ .+|
T Consensus 175 ~~-~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~ 253 (343)
T 1ri6_A 175 VE-GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS 253 (343)
T ss_dssp ST-TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT
T ss_pred CC-CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC
Confidence 21 12456777876665 66665 345442 2232 22233322 21 100 123455788887764 55555 456
Q ss_pred eEEE
Q 036387 328 VLLQ 331 (334)
Q Consensus 328 ~il~ 331 (334)
.|..
T Consensus 254 ~i~v 257 (343)
T 1ri6_A 254 LITV 257 (343)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 182
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=61.67 E-value=60 Score=29.06 Aligned_cols=109 Identities=13% Similarity=0.082 Sum_probs=56.2
Q ss_pred EeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccC-----CCeeeEEEEeecCCeEEEEe-CCCcEEEE-cCC
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQS-----RGFGILDVGYRSQDEAWAAG-GSGVLLKT-TNG 292 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~-----~~~~~~~v~~~~~~~~~~~G-~~G~i~~S-~Dg 292 (334)
+..+.|.+++..++.+ .++.|. +....|+. ........ ....+..++|.+++..+++| .+|.|+.- ...
T Consensus 252 v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 252 INSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQ--LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp CCEEEECTTSSEEEEECSSSCEEEEETTTTEE--EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTT
T ss_pred eEEEEEecCCCeEEEEcCCCeEEEEECCCCcE--EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCC
Confidence 5567778888766655 344432 22223321 11111100 01125678888777766665 46665332 222
Q ss_pred CcCcEEcccC-CCcccceeEEEEeeCCeEEEEe-CCeeEEEE
Q 036387 293 GKTWIREKAA-DNIAANLYSVKFINEKKGFVLG-NDGVLLQY 332 (334)
Q Consensus 293 G~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a~G-~~G~il~s 332 (334)
++.-..+... ..-...+.+++|.+++..+++| .+|.|..+
T Consensus 330 ~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 330 AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 3322222110 1123568899999888777765 67876544
No 183
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=61.62 E-value=88 Score=27.81 Aligned_cols=110 Identities=7% Similarity=0.048 Sum_probs=57.1
Q ss_pred eEeeeeEeecCC-EEEE-EcCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCCcE--EEEcCCCc
Q 036387 221 RIQNMGWRADGG-LWLL-VRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSGVL--LKTTNGGK 294 (334)
Q Consensus 221 ~i~~~~~~~~g~-~~~~-~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G~i--~~S~DgG~ 294 (334)
.+..+.+.+++. ++++ +.++.|. +....++. ....+.... ...+..+.+. ++..++++ .+|.+ |...+..+
T Consensus 292 ~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~-~~~~~~~~~-~~~v~~~~~~-~~~~l~s~~~d~~v~iw~~~~~~~ 368 (420)
T 3vl1_A 292 SCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC-PVGEFLINE-GTPINNVYFA-AGALFVSSGFDTSIKLDIISDPES 368 (420)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEEEST-TSCEEEEEEE-TTEEEEEETTTEEEEEEEECCTTC
T ss_pred CceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC-chhhhhccC-CCCceEEEeC-CCCEEEEecCCccEEEEeccCCCC
Confidence 355677888876 5554 4456543 22233321 011111111 1245566554 45555554 46644 54445333
Q ss_pred CcEEcccCC-----CcccceeEEEEeeCCe----EEEEeCCeeEEEEc
Q 036387 295 TWIREKAAD-----NIAANLYSVKFINEKK----GFVLGNDGVLLQYL 333 (334)
Q Consensus 295 tW~~~~~~~-----~~~~~l~~i~~~~~~~----~~a~G~~G~il~s~ 333 (334)
......... .....+.+++|.+++. ++++|.+|.+..++
T Consensus 369 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 369 ERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp CSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred CccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 322221110 1235688899987666 99999999887653
No 184
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=60.90 E-value=98 Score=28.13 Aligned_cols=107 Identities=12% Similarity=0.164 Sum_probs=52.9
Q ss_pred eEeeeeEee-cCCEEEEE-cCCeEEE-ecCCCcce-eeEeccccCCCeeeEEEEeecCCe-EEEE-eCCCcE--EEEcCC
Q 036387 221 RIQNMGWRA-DGGLWLLV-RGGGLFL-SKGTGITE-EFEEVPVQSRGFGILDVGYRSQDE-AWAA-GGSGVL--LKTTNG 292 (334)
Q Consensus 221 ~i~~~~~~~-~g~~~~~~-~~g~i~~-S~D~G~tW-~w~~~~~~~~~~~~~~v~~~~~~~-~~~~-G~~G~i--~~S~Dg 292 (334)
.+..+.+.+ ++.+++++ .++.|.. ....+... ....+. .....+..+.|.+.+. ++++ +.+|.| |-....
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~--~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD--AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE--CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee--cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 355677776 45565544 4555432 22222100 011111 1123577888876554 5554 456755 222222
Q ss_pred CcCcEEcccCCCcccceeEEEEeeCC-eEEE-EeCCeeEEEE
Q 036387 293 GKTWIREKAADNIAANLYSVKFINEK-KGFV-LGNDGVLLQY 332 (334)
Q Consensus 293 G~tW~~~~~~~~~~~~l~~i~~~~~~-~~~a-~G~~G~il~s 332 (334)
++.-..+.. -...+.+|.+.+++ .+++ ++.+|.|..+
T Consensus 311 ~~~~~~~~~---h~~~v~~i~~sp~~~~~l~s~~~d~~i~iw 349 (430)
T 2xyi_A 311 KLKLHSFES---HKDEIFQVQWSPHNETILASSGTDRRLHVW 349 (430)
T ss_dssp TSCSEEEEC---CSSCEEEEEECSSCTTEEEEEETTSCCEEE
T ss_pred CCCeEEeec---CCCCEEEEEECCCCCCEEEEEeCCCcEEEE
Confidence 322222221 23578999998766 3444 5577766543
No 185
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=60.55 E-value=84 Score=27.22 Aligned_cols=59 Identities=14% Similarity=0.157 Sum_probs=36.3
Q ss_pred eeEEEEeecCCeEEEE-eCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCe
Q 036387 265 GILDVGYRSQDEAWAA-GGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDG 327 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G 327 (334)
.+..++|.+++..+++ +.+|.|. .....++.-..+.. ...+.+++|.+++..++++...
T Consensus 198 ~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~~~~sp~~~~la~~~~~ 258 (319)
T 3frx_A 198 NINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA----QDEVFSLAFSPNRYWLAAATAT 258 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC----CSCEEEEEECSSSSEEEEEETT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC----CCcEEEEEEcCCCCEEEEEcCC
Confidence 5788888877766665 4567652 22333332222222 3578999999888887766443
No 186
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=60.09 E-value=83 Score=27.04 Aligned_cols=106 Identities=10% Similarity=0.135 Sum_probs=50.6
Q ss_pred eeeeEeecCC-EEEEEc--CCeEEEec-CCCcceeeEeccccCCCeeeEEEEeecC-CeEEEEeCCCcEEE-EcCCCcCc
Q 036387 223 QNMGWRADGG-LWLLVR--GGGLFLSK-GTGITEEFEEVPVQSRGFGILDVGYRSQ-DEAWAAGGSGVLLK-TTNGGKTW 296 (334)
Q Consensus 223 ~~~~~~~~g~-~~~~~~--~g~i~~S~-D~G~tW~w~~~~~~~~~~~~~~v~~~~~-~~~~~~G~~G~i~~-S~DgG~tW 296 (334)
..+.+.+++. +|+... ++.|+.-. +.++. ...+.... ....++.+.++ +.+|++..++.++. ....|+.-
T Consensus 144 ~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 144 RELVADDATNTVYISGIGKESVIWVVDGGNIKL--KTAIQNTG--KMSTGLALDSEGKRLYTTNADGELITIDTADNKIL 219 (353)
T ss_dssp EEEEEETTTTEEEEEEESSSCEEEEEETTTTEE--EEEECCCC--TTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEE
T ss_pred ceEEECCCCCEEEEEecCCCceEEEEcCCCCce--EEEecCCC--CccceEEECCCCCEEEEEcCCCeEEEEECCCCeEE
Confidence 4466777776 555542 44454432 33331 11122111 12335556554 45666666666543 22333333
Q ss_pred EEcccCC-CcccceeEEEEeeCCe-EEEEeCC-eeEEEE
Q 036387 297 IREKAAD-NIAANLYSVKFINEKK-GFVLGND-GVLLQY 332 (334)
Q Consensus 297 ~~~~~~~-~~~~~l~~i~~~~~~~-~~a~G~~-G~il~s 332 (334)
..+.... +......++++.++++ +|++... +.|...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 258 (353)
T 3vgz_A 220 SRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVV 258 (353)
T ss_dssp EEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEE
T ss_pred EEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEE
Confidence 3333211 1234567788887655 6666544 666554
No 187
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=59.84 E-value=91 Score=27.40 Aligned_cols=108 Identities=17% Similarity=0.114 Sum_probs=54.7
Q ss_pred EeeeeEeecCCEEEEEc-CCeEE-EecCCCcceeeEeccc---c-CCCeeeEEEEeecCCeEEEEe-CC---CcEE-EEc
Q 036387 222 IQNMGWRADGGLWLLVR-GGGLF-LSKGTGITEEFEEVPV---Q-SRGFGILDVGYRSQDEAWAAG-GS---GVLL-KTT 290 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~-~g~i~-~S~D~G~tW~w~~~~~---~-~~~~~~~~v~~~~~~~~~~~G-~~---G~i~-~S~ 290 (334)
+..+.+.+++ .++++. ++.|. +....++. ...... . .....+..+.|.+++..++++ .+ |.|. ...
T Consensus 189 i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 189 ATSVDISERG-LIATGFNNGTVQISELSTLRP--LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCEEEECTTS-EEEEECTTSEEEEEETTTTEE--EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred ceEEEECCCc-eEEEEeCCCcEEEEECCCCce--eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 4556777777 655554 44443 22233321 111221 1 002357888887766655554 44 5552 233
Q ss_pred CCCcCcEEcccCCC----------cccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 291 NGGKTWIREKAADN----------IAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 291 DgG~tW~~~~~~~~----------~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
..++.-..+..+.. ....+.++.|.++++.+++ +.+|.|..+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 266 EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp TTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 33433222222000 2357899999876665554 578876654
No 188
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=58.93 E-value=86 Score=26.86 Aligned_cols=105 Identities=9% Similarity=0.003 Sum_probs=54.6
Q ss_pred EeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEE-eCCCcEEE-EcCCCcCcE
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAA-GGSGVLLK-TTNGGKTWI 297 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~ 297 (334)
+..+.|.+++..++++ .++.|. +....|+. .... ......+.+++|.+++..+++ +.+|.|.. .... .+.
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~--~~~~--~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~--~~~ 131 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK--VVDF--EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN--NWA 131 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCE--EEEE--ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG--TTE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcE--EEEE--eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC--Ccc
Confidence 4456777777766554 455442 23333431 1111 111125788888877665554 55676522 2222 233
Q ss_pred EcccCCCcccceeEEEEee-CCe-EEEEeCCeeEEEE
Q 036387 298 REKAADNIAANLYSVKFIN-EKK-GFVLGNDGVLLQY 332 (334)
Q Consensus 298 ~~~~~~~~~~~l~~i~~~~-~~~-~~a~G~~G~il~s 332 (334)
....-..-...+.+++|.+ ++. ++.++.+|.|.-+
T Consensus 132 ~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 132 LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 3222112235789999986 444 5556688877644
No 189
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=58.81 E-value=90 Score=27.05 Aligned_cols=107 Identities=16% Similarity=0.231 Sum_probs=52.3
Q ss_pred EeeeeEeecCCEEEEEc-CCeE--EEecCCCcceeeEeccccCCCeeeEEEEeecCCe-EEEEeC-CCc--EEEEcC-CC
Q 036387 222 IQNMGWRADGGLWLLVR-GGGL--FLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE-AWAAGG-SGV--LLKTTN-GG 293 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~-~g~i--~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~-~~~~G~-~G~--i~~S~D-gG 293 (334)
+..+.+.+++.+|++.. .+.+ |.-...|+--.......+. +.....++|.++++ +|++.. .+. +|.... .|
T Consensus 143 ~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 143 IHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT-TCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC-CCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 44577788888776654 3333 4333244310111112222 12455678877765 666544 333 343332 23
Q ss_pred cCcEEcccCC--Cc----ccceeEEEEeeCCe-EEEEe-CCeeEE
Q 036387 294 KTWIREKAAD--NI----AANLYSVKFINEKK-GFVLG-NDGVLL 330 (334)
Q Consensus 294 ~tW~~~~~~~--~~----~~~l~~i~~~~~~~-~~a~G-~~G~il 330 (334)
.++.+.... +. ......+++.++++ +|++. .++.|.
T Consensus 222 -~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~ 265 (347)
T 3hfq_A 222 -AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLA 265 (347)
T ss_dssp -EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEE
T ss_pred -ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEE
Confidence 343332210 10 13477899988876 55654 345443
No 190
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=58.47 E-value=52 Score=32.41 Aligned_cols=64 Identities=9% Similarity=-0.086 Sum_probs=38.0
Q ss_pred eEEEEeecCCeEEEEeCCCcEEE-EcCCCc--CcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 266 ILDVGYRSQDEAWAAGGSGVLLK-TTNGGK--TWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 266 ~~~v~~~~~~~~~~~G~~G~i~~-S~DgG~--tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
+..++|.++++.++++..+.|+. ..++|+ .-+++.. ....+..+.|+++++.++.+.++.|+..
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~---~~~~~~~~~~SPDG~~la~~~~~~i~~~ 177 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTH---GEGFATDAKLSPKGGFVSFIRGRNLWVI 177 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCC---SSSCEEEEEECTTSSEEEEEETTEEEEE
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEccc---CCcccccccCCCCCCEEEEEeCCcEEEE
Confidence 45677777776555544566644 345552 2233322 2346888999988887776656555543
No 191
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=57.92 E-value=99 Score=27.20 Aligned_cols=181 Identities=9% Similarity=0.060 Sum_probs=86.9
Q ss_pred eeEEEEEecCCCCEEEEEEcC-CeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEEc-CCEEEEEc-
Q 036387 116 VLLDIAFVPDDLNHGFLLGTR-QTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVGK-PAILLHTS- 189 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~~-g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG~-~g~i~~S~- 189 (334)
.+.+++|.| +.+.+++++.. +.|+. ..+.|+.-....... .+..+.+.+ +.+|+.+. .+.|+.-+
T Consensus 75 ~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 75 SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK--------SPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC--------CcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 678899987 55677777753 55433 233333222221111 356777774 45655554 45454433
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEc-CCeEEEe-cCCCcceeeEeccccCCCeee
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVR-GGGLFLS-KGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~-~g~i~~S-~D~G~tW~w~~~~~~~~~~~~ 266 (334)
..++.-..+... . .+..+.+.+++. +|+.+. ++.|+.- ...++. ...+.. ...+
T Consensus 146 ~~~~~~~~~~~~-----~-------------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~---~~~~ 202 (391)
T 1l0q_A 146 VTKAVINTVSVG-----R-------------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--IDTVKV---EAAP 202 (391)
T ss_dssp TTTEEEEEEECC-----S-------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEEC---SSEE
T ss_pred CCCcEEEEEecC-----C-------------CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--EEEEec---CCCc
Confidence 222211111110 0 123456677776 445543 3444332 222321 111111 1245
Q ss_pred EEEEeecCC-eEEEEe---CCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEE-eCCeeEEEE
Q 036387 267 LDVGYRSQD-EAWAAG---GSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVL-GNDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~~~-~~~~~G---~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~-G~~G~il~s 332 (334)
..++|.+++ .+++++ .++.|+. ....++.-..+.. .....++.+.++++ +|++ +.+|.|..+
T Consensus 203 ~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~s~~~d~~v~v~ 271 (391)
T 1l0q_A 203 SGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV----GPDPAGIAVTPDGKKVYVALSFXNTVSVI 271 (391)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC----CSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred cceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec----CCCccEEEEccCCCEEEEEcCCCCEEEEE
Confidence 677777655 455554 3565533 3333433333322 24567888887664 6565 456766544
No 192
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=57.34 E-value=93 Score=26.72 Aligned_cols=108 Identities=11% Similarity=0.067 Sum_probs=57.7
Q ss_pred eEeeeeEeec----CCEEEE-EcCCeEEE-ecCCCcceeeEeccccCCCeeeEEEEeec-CCeEEEE-eCCCcEE-EEcC
Q 036387 221 RIQNMGWRAD----GGLWLL-VRGGGLFL-SKGTGITEEFEEVPVQSRGFGILDVGYRS-QDEAWAA-GGSGVLL-KTTN 291 (334)
Q Consensus 221 ~i~~~~~~~~----g~~~~~-~~~g~i~~-S~D~G~tW~w~~~~~~~~~~~~~~v~~~~-~~~~~~~-G~~G~i~-~S~D 291 (334)
.+..+.|.++ +.++++ +.++.|.. ..+.++. ...+. .....+.++.|.+ ++..+++ +.+|.|. ...+
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~--~~~~~--~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC--IKHYV--GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE--EEEEE--SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE--eeeec--CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 3556777776 444444 45555532 2233331 11111 1123578888876 5555554 5567653 3334
Q ss_pred CCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 292 GGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 292 gG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
.++.-..+.........+.++.+.+++..++ ++.+|.|..+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 4544444321112346799999987665554 5678877654
No 193
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=54.98 E-value=1.1e+02 Score=26.94 Aligned_cols=108 Identities=10% Similarity=0.149 Sum_probs=54.4
Q ss_pred eEeeeeEeec-CCEEEEE-cCCeEE-EecCCCcceeeEeccccCC----CeeeEEEEeecCC-eEEEE-eCCC---cE--
Q 036387 221 RIQNMGWRAD-GGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSR----GFGILDVGYRSQD-EAWAA-GGSG---VL-- 286 (334)
Q Consensus 221 ~i~~~~~~~~-g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~----~~~~~~v~~~~~~-~~~~~-G~~G---~i-- 286 (334)
.+..+.+.++ +.+++++ .++.|. +..+.++. ...+..... ...+.++.|.+++ ..+++ +.++ .|
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKE--VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEE--EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCc--ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 3456777777 4565554 444443 23333331 122222110 2357888887764 34444 4444 43
Q ss_pred EEEcCCCcCcEEcccCCCcccceeEEEEee-CCeE-EEEeCCeeEEEE
Q 036387 287 LKTTNGGKTWIREKAADNIAANLYSVKFIN-EKKG-FVLGNDGVLLQY 332 (334)
Q Consensus 287 ~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~-~~~~-~a~G~~G~il~s 332 (334)
|-..++.+.-..+.. .....+.++.|.+ ++.. +.++.+|.|..+
T Consensus 245 ~d~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQ--GHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp EETTSTTSCSBCCCS--CCSSCEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred EeCCCCCCCcEEeec--CccCceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 333332232333320 1235789999986 5554 455678877654
No 194
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=52.88 E-value=1.7e+02 Score=28.50 Aligned_cols=29 Identities=21% Similarity=0.432 Sum_probs=17.1
Q ss_pred EeeeeEeecCCEEEEEcCCeEEEe-cCCCc
Q 036387 222 IQNMGWRADGGLWLLVRGGGLFLS-KGTGI 250 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~~g~i~~S-~D~G~ 250 (334)
+..+.|++||..++...++.|+.- .++|+
T Consensus 154 ~~~~~~SPDG~~la~~~~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 154 ATDAKLSPKGGFVSFIRGRNLWVIDLASGR 183 (741)
T ss_dssp EEEEEECTTSSEEEEEETTEEEEEETTTTE
T ss_pred cccccCCCCCCEEEEEeCCcEEEEecCCCC
Confidence 445677888886655555566543 34443
No 195
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=52.24 E-value=43 Score=29.37 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=41.2
Q ss_pred eeEEEEeec--CCeEEE-EeCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 265 GILDVGYRS--QDEAWA-AGGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~--~~~~~~-~G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+..+.+.+ .+..++ ++.+|.| +.....++.-+.... .....+.+++|.+++..+++ +.+|.|.-+
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~--~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA--KSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC--CSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec--CCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 477888877 666665 4557765 334455555333222 22346899999998888887 577876544
No 196
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=51.32 E-value=1e+02 Score=25.31 Aligned_cols=176 Identities=10% Similarity=-0.009 Sum_probs=80.0
Q ss_pred eeeEEEEEecCCCCEEEEEEc----CCeEEEEc-CCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEE-cCC--E
Q 036387 115 VVLLDIAFVPDDLNHGFLLGT----RQTLLETK-DGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVG-KPA--I 184 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~----~g~i~~S~-DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG-~~g--~ 184 (334)
..+.++.|.| |.+.++++.. ...|+.-. ++++ -+.+.... ....+.+.+ +.+++.+ ..+ .
T Consensus 85 ~~~~~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~--------~~~~~~~spdg~~l~~~~~~~~~~~ 154 (297)
T 2ojh_A 85 ICNNDHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL--------PSYWHGWSPDGKSFTYCGIRDQVFD 154 (297)
T ss_dssp CBCSCCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS--------SEEEEEECTTSSEEEEEEEETTEEE
T ss_pred ccccceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC--------CccceEECCCCCEEEEEECCCCceE
Confidence 4677889987 4555555552 24555543 4443 33332211 245566764 3444333 333 4
Q ss_pred EEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE-EEc-C--CeEEEec-CCCcceeeEeccc
Q 036387 185 LLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL-LVR-G--GGLFLSK-GTGITEEFEEVPV 259 (334)
Q Consensus 185 i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~-~~~-~--g~i~~S~-D~G~tW~w~~~~~ 259 (334)
|+.-+-.+.....+... + ..+..+.+.+++..++ ... + ..||.-. +++. ...+..
T Consensus 155 l~~~~~~~~~~~~~~~~---~--------------~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~~ 214 (297)
T 2ojh_A 155 IYSMDIDSGVETRLTHG---E--------------GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS---VERITD 214 (297)
T ss_dssp EEEEETTTCCEEECCCS---S--------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC---EEECCC
T ss_pred EEEEECCCCcceEcccC---C--------------CccccceECCCCCEEEEEecCCCCccEEEECCCCCC---cEEEec
Confidence 55433222223333211 0 0234466777777444 332 2 3455544 3333 223221
Q ss_pred cCCCeeeEEEEeecCCeEEE-EeCC-----------CcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 260 QSRGFGILDVGYRSQDEAWA-AGGS-----------GVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 260 ~~~~~~~~~v~~~~~~~~~~-~G~~-----------G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
. ...+..+.|.+++..++ ++.. +.|+.- .++++ .+.+.........+..+.|.++++.+++
T Consensus 215 ~--~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~ 288 (297)
T 2ojh_A 215 S--AYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPDGDEFAY 288 (297)
T ss_dssp C--SEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTTSSEEEE
T ss_pred C--CcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCC-ceeeeccCCCCcccccceECCCCCEEEE
Confidence 1 23456677776665443 3322 234433 34443 3333221011245677788876665443
No 197
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=51.19 E-value=1.4e+02 Score=26.93 Aligned_cols=172 Identities=10% Similarity=0.045 Sum_probs=78.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEE-cCCEEEEEcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVG-KPAILLHTSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG-~~g~i~~S~Dg 191 (334)
..++++.|.| +...++.++.+|.|.. ..+.|+-=... .. + .-.+.+|.|.+ +..++.| ..+.|..-+=
T Consensus 109 ~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l--~~-h----~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~- 179 (410)
T 1vyh_C 109 SPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTL--KG-H----TDSVQDISFDHSGKLLASCSADMTIKLWDF- 179 (410)
T ss_dssp SCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEE--CC-C----SSCEEEEEECTTSSEEEEEETTSCCCEEET-
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEE--ec-c----CCcEEEEEEcCCCCEEEEEeCCCeEEEEeC-
Confidence 5788999987 4455555566676432 22333211111 11 1 11478888875 4444444 4443222110
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDV 269 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v 269 (334)
.+.+.+.. +.+ |. ..+..+.+.+++..++.+ .++.|. +....|.. ..... .....+..+
T Consensus 180 -~~~~~~~~---~~~-------h~----~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~--~~~~~--~h~~~v~~~ 240 (410)
T 1vyh_C 180 -QGFECIRT---MHG-------HD----HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC--VKTFT--GHREWVRMV 240 (410)
T ss_dssp -TSSCEEEC---CCC-------CS----SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE--EEEEE--CCSSCEEEE
T ss_pred -CCCceeEE---EcC-------CC----CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE--EEEEe--CCCccEEEE
Confidence 11222221 111 11 135567778887755544 455442 22233331 11111 111246677
Q ss_pred EeecCCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeC
Q 036387 270 GYRSQDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINE 317 (334)
Q Consensus 270 ~~~~~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~ 317 (334)
.+.+++..+++ +.+|.|.. ....++.=..+.. -...+.++.|.++
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~---h~~~v~~~~~~~~ 287 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELRE---HRHVVECISWAPE 287 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC---CSSCEEEEEECCS
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeEecC---CCceEEEEEEcCc
Confidence 77776666554 45666522 2222322122211 2346778888653
No 198
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=50.98 E-value=1.4e+02 Score=26.71 Aligned_cols=183 Identities=8% Similarity=-0.056 Sum_probs=87.1
Q ss_pred eeeEEEEEecCCCCEEEEEEc-CCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-C-eEEEEEc--------C
Q 036387 115 VVLLDIAFVPDDLNHGFLLGT-RQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-K-EGWIVGK--------P 182 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~-~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~-~~~~vG~--------~ 182 (334)
..+..++|.| +.+.+++++. .+.|.. ..+.|+.-... +.. ..+..+.+.+ + .+++.+. .
T Consensus 212 ~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~--~~~------~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 212 KWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKT--DKI------GLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp SSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEC--CCC------SEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred CCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEe--cCC------CCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 4678899987 5567777773 565443 22334322222 111 1466778874 3 4555442 2
Q ss_pred CEEEEEc-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEE-cCCeEE-EecCCCcceeeEecc
Q 036387 183 AILLHTS-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLV-RGGGLF-LSKGTGITEEFEEVP 258 (334)
Q Consensus 183 g~i~~S~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~-~~g~i~-~S~D~G~tW~w~~~~ 258 (334)
+.|+.-+ +.|+.-..+.. ...+..+.+.+++. +|+++ .++.+. ...+.++. ...+.
T Consensus 283 g~i~~~d~~~~~~~~~~~~------------------~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~--~~~~~ 342 (433)
T 3bws_A 283 GRLGIYSMDKEKLIDTIGP------------------PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV--QKSIP 342 (433)
T ss_dssp EEEEEEETTTTEEEEEEEE------------------EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE--EEEEE
T ss_pred CeEEEEECCCCcEEeeccC------------------CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcE--EEEec
Confidence 3333222 22322111110 00233456677775 55553 344443 23333431 12222
Q ss_pred ccCCCeeeEEEEeecCCe-EEEEeC---------------CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE
Q 036387 259 VQSRGFGILDVGYRSQDE-AWAAGG---------------SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFV 322 (334)
Q Consensus 259 ~~~~~~~~~~v~~~~~~~-~~~~G~---------------~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a 322 (334)
.. ..+..+++.+++. ++++.. +|.|+.-. -++.+.+..- .....+.++++.++++.++
T Consensus 343 ~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d--~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~ 416 (433)
T 3bws_A 343 VF---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVID--TTTDTVKEFW-EAGNQPTGLDVSPDNRYLV 416 (433)
T ss_dssp CS---SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEE--TTTTEEEEEE-ECSSSEEEEEECTTSCEEE
T ss_pred CC---CCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEE--CCCCcEEEEe-cCCCCCceEEEcCCCCEEE
Confidence 11 2466788877665 555443 24554332 1223333321 1134678999987776544
Q ss_pred -EeC-CeeEEEE
Q 036387 323 -LGN-DGVLLQY 332 (334)
Q Consensus 323 -~G~-~G~il~s 332 (334)
++. +|.|..+
T Consensus 417 ~~~~~d~~i~v~ 428 (433)
T 3bws_A 417 ISDFLDHQIRVY 428 (433)
T ss_dssp EEETTTTEEEEE
T ss_pred EEECCCCeEEEE
Confidence 553 7776543
No 199
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=50.95 E-value=1.3e+02 Score=26.32 Aligned_cols=104 Identities=16% Similarity=0.227 Sum_probs=51.0
Q ss_pred eeeEeecCC-EEEEEc-CCeE--EEecCCCcceeeEecc-ccCCCeeeEEEEeecCCe-EEEEeCC--Cc--EEEEcCCC
Q 036387 224 NMGWRADGG-LWLLVR-GGGL--FLSKGTGITEEFEEVP-VQSRGFGILDVGYRSQDE-AWAAGGS--GV--LLKTTNGG 293 (334)
Q Consensus 224 ~~~~~~~g~-~~~~~~-~g~i--~~S~D~G~tW~w~~~~-~~~~~~~~~~v~~~~~~~-~~~~G~~--G~--i~~S~DgG 293 (334)
.+.|++++. +|++.. ++.| |... .|+--....+. .+.......+++|.++++ +|++... +. +|.-....
T Consensus 215 ~~~~spdg~~l~v~~~~~~~v~v~~~~-~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 215 HLIFNSDGKFAYLINEIGGTVIAFRYA-DGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEEECTTSSEEEEEETTTCEEEEEEEE-TTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEEcCCCCEEEEEcCCCCeEEEEEec-CCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 467788887 556653 4443 3333 34210112221 122112346788877665 5565443 33 34333122
Q ss_pred cCcEEcccCCCcccceeEEEEeeCCe-EEEEe-CCeeE
Q 036387 294 KTWIREKAADNIAANLYSVKFINEKK-GFVLG-NDGVL 329 (334)
Q Consensus 294 ~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G-~~G~i 329 (334)
..++.+... ........++|.++++ +|+++ .++.+
T Consensus 294 g~~~~~~~~-~~g~~~~~~~~spdg~~l~~~~~~~~~v 330 (361)
T 3scy_A 294 GTLTKVGYQ-LTGIHPRNFIITPNGKYLLVACRDTNVI 330 (361)
T ss_dssp CCEEEEEEE-ECSSCCCEEEECTTSCEEEEEETTTTEE
T ss_pred CcEEEeeEe-cCCCCCceEEECCCCCEEEEEECCCCCE
Confidence 345554431 1134567889988776 55555 34443
No 200
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=50.73 E-value=1.3e+02 Score=26.31 Aligned_cols=26 Identities=12% Similarity=0.133 Sum_probs=18.7
Q ss_pred cceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 307 ANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 307 ~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
..+.+++|.++++.++ ++.+|.|..+
T Consensus 335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw 361 (408)
T 4a11_B 335 KTVDCCVFQSNFQELYSGSRDCNILAW 361 (408)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CeEEEEEEcCCCCEEEEECCCCeEEEE
Confidence 5688999988766555 5578877654
No 201
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=50.42 E-value=1.2e+02 Score=26.11 Aligned_cols=198 Identities=10% Similarity=0.059 Sum_probs=90.2
Q ss_pred eeeEEEEEecCCCCEEEEEEc-CCe--EEEEcCCCcCeEeCc---CCCCcc--cCcceeEEEEEEeC-CeEEEEEc-CC-
Q 036387 115 VVLLDIAFVPDDLNHGFLLGT-RQT--LLETKDGGKTWAPRS---IPSAEE--EDFNYRFNSISFKG-KEGWIVGK-PA- 183 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~-~g~--i~~S~DgG~TW~~~~---~p~~~~--~~~~~~~~~I~~~~-~~~~~vG~-~g- 183 (334)
.....|+|.| |.+.+++++. .+. ++.-...|. .+.+. .....+ .....+...+.+.+ +++|+... .+
T Consensus 86 ~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 86 TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGA-LTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSC-EEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTE
T ss_pred CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCC-eeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCE
Confidence 3466789987 5667777663 343 444433332 33221 111000 00112456778874 45666543 23
Q ss_pred -EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEcC-Ce--EEEecC-CCcceeeEec
Q 036387 184 -ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVRG-GG--LFLSKG-TGITEEFEEV 257 (334)
Q Consensus 184 -~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~~-g~--i~~S~D-~G~tW~w~~~ 257 (334)
.+|.-...|+ .+.+......++. ....+.|.+++. +|++... +. +|.... .|+--....+
T Consensus 164 v~~~~~~~~g~-~~~~~~~~~~~g~-------------~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 229 (347)
T 3hfq_A 164 VYVYNVSDAGQ-LSEQSVLTMEAGF-------------GPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV 229 (347)
T ss_dssp EEEEEECTTSC-EEEEEEEECCTTC-------------CEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCc-EEEeeeEEcCCCC-------------CCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee
Confidence 3344442332 3332211000111 123467788887 6665543 33 333332 2431001111
Q ss_pred c-ccCC---CeeeEEEEeecCCe-EEEEeC-CCc--EEEEcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEeCC-e
Q 036387 258 P-VQSR---GFGILDVGYRSQDE-AWAAGG-SGV--LLKTTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLGND-G 327 (334)
Q Consensus 258 ~-~~~~---~~~~~~v~~~~~~~-~~~~G~-~G~--i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~~-G 327 (334)
. .+.. .....+++|.++++ +|++.. .+. +|.-...| +.+.+............++|.++++ +|+++.+ +
T Consensus 230 ~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 230 KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 1 1111 12466788887765 666543 443 34443333 4555543211123567899988776 5555543 4
Q ss_pred eE
Q 036387 328 VL 329 (334)
Q Consensus 328 ~i 329 (334)
.+
T Consensus 309 ~v 310 (347)
T 3hfq_A 309 NA 310 (347)
T ss_dssp EE
T ss_pred cE
Confidence 43
No 202
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=49.02 E-value=1.5e+02 Score=26.75 Aligned_cols=141 Identities=7% Similarity=-0.017 Sum_probs=68.9
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcCCEEEE--EcCC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLH--TSDA 191 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~g~i~~--S~Dg 191 (334)
..+.++.+.| +.+.++..+.+|.|.. ..+.|+-=...... ...+..+.+.++.++.++..+.|.. ..++
T Consensus 311 ~~v~~~~~~~-~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 311 DRIYSTIYDH-ERKRCISASMDTTIRIWDLENGELMYTLQGH-------TALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp SCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCcEEEEEeCC-------CCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 5788999987 4566666666676432 23333322111111 1146777777666666666664332 2222
Q ss_pred CCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEE-EecCCCcceeeEeccccCCCeeeEEEE
Q 036387 192 GESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVG 270 (334)
Q Consensus 192 G~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~ 270 (334)
...++... . . .+..+.+.+++.+++++.++.|. +....|+ ............+.+++
T Consensus 383 ~~~~~~~~-~-----~-------------~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~---~~~~~~~~~~~~v~~v~ 440 (464)
T 3v7d_B 383 SRKFSYHH-T-----N-------------LSAITTFYVSDNILVSGSENQFNIYNLRSGK---LVHANILKDADQIWSVN 440 (464)
T ss_dssp CEEEEEEC-T-----T-------------CCCEEEEEECSSEEEEEETTEEEEEETTTCC---EEESCTTTTCSEEEEEE
T ss_pred ceeeeecC-C-----C-------------CccEEEEEeCCCEEEEecCCeEEEEECCCCc---EEehhhccCCCcEEEEE
Confidence 11111100 0 0 11224556778877777666653 3334444 12211112223678888
Q ss_pred eecCCeEEEEe-CCCcE
Q 036387 271 YRSQDEAWAAG-GSGVL 286 (334)
Q Consensus 271 ~~~~~~~~~~G-~~G~i 286 (334)
|. ++.+++++ .+|.+
T Consensus 441 ~~-~~~l~~~~~~~g~~ 456 (464)
T 3v7d_B 441 FK-GKTLVAAVEKDGQS 456 (464)
T ss_dssp EE-TTEEEEEEEETTEE
T ss_pred ec-CCEEEEEEEeCCeE
Confidence 85 55555544 34443
No 203
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=47.14 E-value=1.5e+02 Score=25.98 Aligned_cols=110 Identities=14% Similarity=0.245 Sum_probs=58.6
Q ss_pred eEeeeeEeecCCEEEEEc-C---CeEE-EecCCCcceeeEeccccC-----------CCeeeEEEEeecCCeEEEE-eCC
Q 036387 221 RIQNMGWRADGGLWLLVR-G---GGLF-LSKGTGITEEFEEVPVQS-----------RGFGILDVGYRSQDEAWAA-GGS 283 (334)
Q Consensus 221 ~i~~~~~~~~g~~~~~~~-~---g~i~-~S~D~G~tW~w~~~~~~~-----------~~~~~~~v~~~~~~~~~~~-G~~ 283 (334)
.+..+.+.+++..++++. + +.|. +....++. ...+..+. ....+..+.|.+++..+++ +.+
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGER--IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCE--EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcc--cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 355677778887666543 3 4442 23233331 12222100 1235788888776655554 556
Q ss_pred CcE-EEEcCCCcCcEEcccCC---Cc---------------ccceeEEEEeeCC-----------eEEEEeCCeeEEEE
Q 036387 284 GVL-LKTTNGGKTWIREKAAD---NI---------------AANLYSVKFINEK-----------KGFVLGNDGVLLQY 332 (334)
Q Consensus 284 G~i-~~S~DgG~tW~~~~~~~---~~---------------~~~l~~i~~~~~~-----------~~~a~G~~G~il~s 332 (334)
|.| +.....++.-..+.... .. ...+.++++.+++ .++.++.+|.|..+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw 391 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWF 391 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEE
Confidence 755 22333343333333100 11 4679999999885 56666789987654
No 204
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=46.78 E-value=1.5e+02 Score=26.07 Aligned_cols=177 Identities=12% Similarity=0.100 Sum_probs=82.5
Q ss_pred CCEEEEEEcCCeEEEE--cCCCcCeEeCcCCCCcccCcceeEEEEEEeCCeEEEEEcCCEEEEEc--CCCCCeEEeecCC
Q 036387 127 LNHGFLLGTRQTLLET--KDGGKTWAPRSIPSAEEEDFNYRFNSISFKGKEGWIVGKPAILLHTS--DAGESWERIPLSS 202 (334)
Q Consensus 127 ~~~~~avG~~g~i~~S--~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~~~~~~vG~~g~i~~S~--DgG~TW~~~~~~~ 202 (334)
.+.+|+....+.|+.= .+|-.-|+....... .....+.++.+|+....+.|+.=+ +|-.-|+.-....
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~--------~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA--------LSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCC--------CSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce--------EcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCC
Confidence 3778877766765442 345557875422111 111123466777766666554433 5555687644221
Q ss_pred CCCCCcccccccCccccceEeeeeEeecCCEEEEEcCCeEEE-ecCCCc-ceeeEeccccCCC---eeeE---EEEeecC
Q 036387 203 QLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLFL-SKGTGI-TEEFEEVPVQSRG---FGIL---DVGYRSQ 274 (334)
Q Consensus 203 ~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~g~i~~-S~D~G~-tW~w~~~~~~~~~---~~~~---~v~~~~~ 274 (334)
.+. . ... .... ..++.+|+.+.++.++. ....|+ -|+... ..+... ..+. ..-...+
T Consensus 175 ~~~----~-~~~--------~~~~-~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~~~ 239 (376)
T 3q7m_A 175 SLS----L-RGE--------SAPT-TAFGAAVVGGDNGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVVVN 239 (376)
T ss_dssp ---------CCC--------CCCE-EETTEEEECCTTTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEEET
T ss_pred cee----e-cCC--------CCcE-EECCEEEEEcCCCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEEEC
Confidence 000 0 000 0011 22455666555665543 333343 443221 111100 0000 0001135
Q ss_pred CeEEEEeCCCcEE-EEc-CCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEEc
Q 036387 275 DEAWAAGGSGVLL-KTT-NGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQYL 333 (334)
Q Consensus 275 ~~~~~~G~~G~i~-~S~-DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s~ 333 (334)
+.+|+.+..|.++ ... ++-..|+.... ....+.. .++++|++..+|.++..+
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~~w~~~~~------~~~~~~~-~~~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQIMWKRELG------SVNDFIV-DGNRIYLVDQNDRVMALT 293 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCEEEEECCC------CEEEEEE-ETTEEEEEETTCCEEEEE
T ss_pred CEEEEEecCcEEEEEECCCCcEEeeccCC------CCCCceE-ECCEEEEEcCCCeEEEEE
Confidence 7788877666553 333 44455776432 2334443 478899988887776553
No 205
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=46.75 E-value=1.7e+02 Score=26.60 Aligned_cols=68 Identities=15% Similarity=0.257 Sum_probs=43.0
Q ss_pred eeEEEEeecCCeEEEEeCC--CcEEEEcCCCcC---cEEcccCCCcccceeEEEEeeCC-eEEEEeCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAAGGS--GVLLKTTNGGKT---WIREKAADNIAANLYSVKFINEK-KGFVLGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~G~~--G~i~~S~DgG~t---W~~~~~~~~~~~~l~~i~~~~~~-~~~a~G~~G~il~s 332 (334)
...+++...++.+|+++.. +.|++=.-+|+. |-...........+..|++.+++ ++++....|.|++.
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEE
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEE
Confidence 5788998888999997653 456665544553 43322111122458899999766 56666567777764
No 206
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=46.18 E-value=79 Score=31.06 Aligned_cols=57 Identities=14% Similarity=0.293 Sum_probs=35.5
Q ss_pred EEEeecCCeEEEEeCC--CcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeC
Q 036387 268 DVGYRSQDEAWAAGGS--GVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGN 325 (334)
Q Consensus 268 ~v~~~~~~~~~~~G~~--G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~ 325 (334)
++++..++.+|++|.. ..+++-.=.-.+|+.+... +..+...++...+++++|++|.
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~-~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDM-QVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCC-SSCCSSCEEEECTTSCEEEECC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCC-CccccccceEEecCCeEEEEeC
Confidence 3444567889998863 2344333234579998652 3334445566665789999986
No 207
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=45.76 E-value=64 Score=31.75 Aligned_cols=58 Identities=12% Similarity=0.160 Sum_probs=32.6
Q ss_pred EEEeecCCeEEEEeCCC------------cEEEEcCCCcCcEEcccCCCcccceeEEE-EeeCCeEEEEeCC
Q 036387 268 DVGYRSQDEAWAAGGSG------------VLLKTTNGGKTWIREKAADNIAANLYSVK-FINEKKGFVLGND 326 (334)
Q Consensus 268 ~v~~~~~~~~~~~G~~G------------~i~~S~DgG~tW~~~~~~~~~~~~l~~i~-~~~~~~~~a~G~~ 326 (334)
.....+++++|++|... .++.-.-...+|+.+... +..+...+.+ +.+++++|++|.+
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~-~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPN-SIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCC-SSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCC-CCccccccHhhcCCCcEEEecCCC
Confidence 33334578899987521 122222234679998753 2333333433 4467899998863
No 208
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=44.53 E-value=1.9e+02 Score=26.65 Aligned_cols=142 Identities=11% Similarity=0.161 Sum_probs=69.1
Q ss_pred EEEEeC---CeEEEEEcCCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEcCC---
Q 036387 168 SISFKG---KEGWIVGKPAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVRGG--- 240 (334)
Q Consensus 168 ~I~~~~---~~~~~vG~~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~~g--- 240 (334)
.|++++ +.+|++-..+.|++=+=.+...+.+... .. ....+.+.+++. +|++...+
T Consensus 141 ~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~----~~-------------~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG----LS-------------KVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp EEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC----CS-------------CEEEEEECTTSSEEEEEECCSCTT
T ss_pred EEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC----CC-------------CcceEEEeCCCCEEEEEeCCCCcc
Confidence 456662 5667665445555544344455554321 00 122456667777 77776421
Q ss_pred --eEE-EecCCCcceeeEeccccCCCeeeEEEEeec-CCeEEEEeC-CCcEEEEc-CCCcCcEEcccCCCcccceeEEEE
Q 036387 241 --GLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRS-QDEAWAAGG-SGVLLKTT-NGGKTWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 241 --~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~-~~~~~~~G~-~G~i~~S~-DgG~tW~~~~~~~~~~~~l~~i~~ 314 (334)
.++ ...+++... ...+.. .....++++.+ ++.+|++.. .+.|++-. |++..-+....+ ....-..|++
T Consensus 204 ~~~v~~~~~~g~~~~-~~~l~~---~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~--~~~~P~gia~ 277 (430)
T 3tc9_A 204 RPNNYILTRESGFKV-ITELTK---GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQ--DSGWEFHIQF 277 (430)
T ss_dssp SEEEEEEEGGGTSCS-EEEEEE---CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECS--SSSCCEEEEE
T ss_pred cceEEEEeCCCceee-eeeecc---CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcC--CCCcceeEEE
Confidence 233 344443211 111111 01233555565 677888753 45565543 444321222221 1234567888
Q ss_pred eeCCe-EEEEe-CCeeEEEE
Q 036387 315 INEKK-GFVLG-NDGVLLQY 332 (334)
Q Consensus 315 ~~~~~-~~a~G-~~G~il~s 332 (334)
.++++ +|++- .+..|++.
T Consensus 278 ~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 278 HPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp CTTSSEEEEEETTTTEEEEE
T ss_pred cCCCCEEEEEECCCCEEEEE
Confidence 87776 77764 44556653
No 209
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=44.45 E-value=1.7e+02 Score=26.00 Aligned_cols=104 Identities=10% Similarity=0.127 Sum_probs=54.2
Q ss_pred EeeeeEeecC-CEEEEEc---CCeEE-EecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEE--e-CCCcE--EEEcC
Q 036387 222 IQNMGWRADG-GLWLLVR---GGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAA--G-GSGVL--LKTTN 291 (334)
Q Consensus 222 i~~~~~~~~g-~~~~~~~---~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~--G-~~G~i--~~S~D 291 (334)
+..+.+.+++ .+++++. ++.|. +..+.++. ...+.. ...+..+.|.+++..+++ | .+|.| |....
T Consensus 262 v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~~~---~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 262 VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNTVDA---GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEEEEC---SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEEEeC---CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 4456677755 4555543 55543 33334431 122221 125778888776665554 4 35654 33333
Q ss_pred CCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 292 GGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 292 gG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
++ ......-..-...+.++.+.++++.++ ++.+|.|..+
T Consensus 337 -~~-~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw 376 (401)
T 4aez_A 337 -SG-LTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFW 376 (401)
T ss_dssp -TE-EEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEE
T ss_pred -cc-ceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 21 222211001235788999988776555 5678877544
No 210
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=42.78 E-value=1.9e+02 Score=26.02 Aligned_cols=66 Identities=12% Similarity=-0.004 Sum_probs=40.5
Q ss_pred eeEEEEeecCCeEE-EEeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEE-EeCCeeEEEEc
Q 036387 265 GILDVGYRSQDEAW-AAGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFV-LGNDGVLLQYL 333 (334)
Q Consensus 265 ~~~~v~~~~~~~~~-~~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s~ 333 (334)
.+.++.|.+++..+ .++.+|.|.. ....++....+.. -...+.+++|.+++..++ ++.+|.|..++
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA---HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC---CSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 46788887765544 4556776532 2334444444433 235799999988776555 56788876543
No 211
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=42.61 E-value=1.6e+02 Score=25.12 Aligned_cols=191 Identities=10% Similarity=0.074 Sum_probs=89.5
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcC-----CEE-
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKP-----AIL- 185 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~-----g~i- 185 (334)
..+.+++|.| +.+.++.++.+|.|.. ..+.++.-.....+ ..+..+.+.+ +..+++ +.. +.|
T Consensus 75 ~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~ 145 (369)
T 3zwl_B 75 GTIWSIDVDC-FTKYCVTGSADYSIKLWDVSNGQCVATWKSP--------VPVKRVEFSPCGNYFLAILDNVMKNPGSIN 145 (369)
T ss_dssp SCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECS--------SCEEEEEECTTSSEEEEEECCBTTBCCEEE
T ss_pred CcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEeecC--------CCeEEEEEccCCCEEEEecCCccCCCCEEE
Confidence 5789999987 4566666667776433 33444432222211 1467788875 444443 333 432
Q ss_pred -EEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEEE-ecCC-CcceeeEeccccC
Q 036387 186 -LHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLFL-SKGT-GITEEFEEVPVQS 261 (334)
Q Consensus 186 -~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~~-S~D~-G~tW~w~~~~~~~ 261 (334)
|................. .......+.. ...+..+.+.+++..++++ .++.|.. .... +.. .......
T Consensus 146 ~~d~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~- 217 (369)
T 3zwl_B 146 IYEIERDSATHELTKVSEE---PIHKIITHEG--LDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY--VDSIDLH- 217 (369)
T ss_dssp EEEEEECTTTCCEEEECSS---CSEEEECCTT--CCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE--EEEEECC-
T ss_pred EEEecCCccceeecccccc---eeeeccCCcC--ccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe--EEEEecC-
Confidence 222222221111111000 0000000000 0135556777777755544 4555432 2222 221 1111111
Q ss_pred CCeeeEEEEeecCCeEEEE-eCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEe-CCe
Q 036387 262 RGFGILDVGYRSQDEAWAA-GGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLG-NDG 327 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~-G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G 327 (334)
...+..+.|.+++..+++ +.+|.| +...+.++.-..+.. ...+..+.+.++++.++++ .++
T Consensus 218 -~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 218 -EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET----DCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp -SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC----SSCEEEEEECSSSSEEEEEECCC
T ss_pred -CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC----CCCceeEEecCCCceEEEeecCC
Confidence 225778888776655544 556765 233333433333332 3568888888877766654 444
No 212
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=42.48 E-value=1.6e+02 Score=26.15 Aligned_cols=68 Identities=16% Similarity=0.176 Sum_probs=38.7
Q ss_pred eeEEEEeecCCeEEEEe-CCCcEE-EEcCCCcCcEEcccCC----CcccceeEEEEeeCCeEEEEe-CCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAAG-GSGVLL-KTTNGGKTWIREKAAD----NIAANLYSVKFINEKKGFVLG-NDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~G-~~G~i~-~S~DgG~tW~~~~~~~----~~~~~l~~i~~~~~~~~~a~G-~~G~il~s 332 (334)
.+.++.|.+++..+++| .+|.|. .....|+.-+.+.... .....+.+++|.++++.+++| .+|.|..+
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 56788888777666654 466552 2223343333322210 111247899999877777665 67776554
No 213
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=42.27 E-value=1.4e+02 Score=27.79 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=0.0
Q ss_pred eeeeEeec---CCEEEEEcCCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCeEEEEeC------CCcEEEEcCCC
Q 036387 223 QNMGWRAD---GGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAGG------SGVLLKTTNGG 293 (334)
Q Consensus 223 ~~~~~~~~---g~~~~~~~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~------~G~i~~S~DgG 293 (334)
..+.+.++ +.+|++...+.|++-.-... +...+..... ...++++..++.+|++.. .+.+....+++
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--~v~~~~~~~~--~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--YVDIKTTNIG--QCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTT--EEEEECCCCS--CEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCC--EEEEeecCCC--CccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Q ss_pred cCcEEcccCCCcccceeEEEEee-CCeEEEEe-CCeeEEEEcC
Q 036387 294 KTWIREKAADNIAANLYSVKFIN-EKKGFVLG-NDGVLLQYLG 334 (334)
Q Consensus 294 ~tW~~~~~~~~~~~~l~~i~~~~-~~~~~a~G-~~G~il~s~~ 334 (334)
..+..... .......+++.+ ++++|++- .++.|++.+.
T Consensus 218 ~~~~~~~~---~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~ 257 (433)
T 4hw6_A 218 FTERLSLC---NARGAKTCAVHPQNGKIYYTRYHHAMISSYDP 257 (433)
T ss_dssp TCCEEEEE---ECSSBCCCEECTTTCCEEECBTTCSEEEEECT
T ss_pred eecccccc---ccCCCCEEEEeCCCCeEEEEECCCCEEEEEEC
No 214
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=42.23 E-value=1.9e+02 Score=25.86 Aligned_cols=54 Identities=11% Similarity=-0.015 Sum_probs=32.9
Q ss_pred EEEEeecCCeEEEEe-C-------------CCcEEEEcCCCc-------------CcEEcccCCCcccceeEEEEee-CC
Q 036387 267 LDVGYRSQDEAWAAG-G-------------SGVLLKTTNGGK-------------TWIREKAADNIAANLYSVKFIN-EK 318 (334)
Q Consensus 267 ~~v~~~~~~~~~~~G-~-------------~G~i~~S~DgG~-------------tW~~~~~~~~~~~~l~~i~~~~-~~ 318 (334)
..+.|.+++.+|++- . .|.|+|-.-+|+ .-+.... ...+.+.+++.+ .+
T Consensus 133 ~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~---G~rnp~gl~~d~~~g 209 (353)
T 2g8s_A 133 GRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSY---GIRNPQGMAMNPWSN 209 (353)
T ss_dssp CCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEE---CCSEEEEEEEETTTT
T ss_pred ccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEE---cCcCccceEEECCCC
Confidence 467777788888863 2 246777654443 1111111 124678889987 78
Q ss_pred eEEEE
Q 036387 319 KGFVL 323 (334)
Q Consensus 319 ~~~a~ 323 (334)
++|++
T Consensus 210 ~l~~~ 214 (353)
T 2g8s_A 210 ALWLN 214 (353)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 89876
No 215
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=41.96 E-value=2e+02 Score=26.08 Aligned_cols=194 Identities=9% Similarity=0.025 Sum_probs=89.5
Q ss_pred eeeEEEEEecCCCCEEEEEE-cCCe--EEEEcC-CCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEEE-cCCEEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLG-TRQT--LLETKD-GGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVG-KPAILLHT 188 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG-~~g~--i~~S~D-gG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG-~~g~i~~S 188 (334)
..+.+++|.| +.+.++++| .+|. ||.... .|+.-+.+..... ...+.+|.|.+ +..++++ ..+.++.-
T Consensus 103 ~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~~~v~~~~~sp~~~~l~~~~~~g~v~~~ 176 (450)
T 2vdu_B 103 SYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF-----SKRPNAISIAEDDTTVIIADKFGDVYSI 176 (450)
T ss_dssp CCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC-----SSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC-----CCCceEEEEcCCCCEEEEEeCCCcEEEE
Confidence 4689999987 455655666 4564 444331 3443333211000 01467888875 4444444 44555332
Q ss_pred c-CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec---CCEEEEE-cCCeEEE-ecCCCcceeeEeccccCC
Q 036387 189 S-DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD---GGLWLLV-RGGGLFL-SKGTGITEEFEEVPVQSR 262 (334)
Q Consensus 189 ~-DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~---g~~~~~~-~~g~i~~-S~D~G~tW~w~~~~~~~~ 262 (334)
. ..++.-. .. ......|. ..+..+.|.++ +..++++ .++.|.. ..+.++. .... ....
T Consensus 177 ~~~~~~~~~---~~------~~~~~~h~----~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~--~~~~-~~~h 240 (450)
T 2vdu_B 177 DINSIPEEK---FT------QEPILGHV----SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFI--VDKW-LFGH 240 (450)
T ss_dssp ETTSCCCSS---CC------CCCSEECS----SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTC--EEEE-CCCC
T ss_pred ecCCccccc---cc------ceeeeccc----CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCce--eeee-ecCC
Confidence 1 1111000 00 00011111 24566788887 6555544 4454432 2223321 1111 1111
Q ss_pred CeeeEEEEeecCCeE-EEEeCCCcE-EEEcCCCcCcEEcccCC----------------------CcccceeEEEEeeCC
Q 036387 263 GFGILDVGYRSQDEA-WAAGGSGVL-LKTTNGGKTWIREKAAD----------------------NIAANLYSVKFINEK 318 (334)
Q Consensus 263 ~~~~~~v~~~~~~~~-~~~G~~G~i-~~S~DgG~tW~~~~~~~----------------------~~~~~l~~i~~~~~~ 318 (334)
...+.++.|. ++.. +.++.++.| +.....|+-=..+.... .....+.+|.+.+++
T Consensus 241 ~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 241 KHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 1257788887 5544 444556665 23334444322222100 112457788888777
Q ss_pred eEEEEe--CCeeEEE
Q 036387 319 KGFVLG--NDGVLLQ 331 (334)
Q Consensus 319 ~~~a~G--~~G~il~ 331 (334)
+.++++ .+|.|..
T Consensus 320 ~~l~~~~~~d~~i~i 334 (450)
T 2vdu_B 320 PFVAFFVEATKCIII 334 (450)
T ss_dssp SEEEEEETTCSEEEE
T ss_pred CEEEEEECCCCeEEE
Confidence 665554 5676654
No 216
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=41.73 E-value=2.3e+02 Score=26.73 Aligned_cols=62 Identities=11% Similarity=-0.065 Sum_probs=36.2
Q ss_pred EEEEeecCCeEEEE-eCC----CcEEEEc-CCCcCcEEcccCCCcccceeEEEEeeCCeEEEEe-CCe--eEEEE
Q 036387 267 LDVGYRSQDEAWAA-GGS----GVLLKTT-NGGKTWIREKAADNIAANLYSVKFINEKKGFVLG-NDG--VLLQY 332 (334)
Q Consensus 267 ~~v~~~~~~~~~~~-G~~----G~i~~S~-DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G--~il~s 332 (334)
.+++|.++++.++. ..+ ..||.-. ++| ..+.+.. .......++|+++++.++.+ .+| .|+..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g-~~~~l~~---~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSG-GLRVFDS---GEGSFSSASISPGMKVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTC-CCEEECC---SSCEEEEEEECTTSCEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCC-CceEeec---CCCccccceECCCCCEEEEccCCCeeEEEEE
Confidence 45666666665553 222 4565544 444 4666643 23457899999888866654 455 56554
No 217
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=41.55 E-value=1.8e+02 Score=25.36 Aligned_cols=102 Identities=11% Similarity=0.164 Sum_probs=54.0
Q ss_pred eeEeecCCEEEEEcC-----------CeEEEecC-CCcceeeE-eccccCCCeeeEEEEeec-CCeEEEEeCCCcEEEE-
Q 036387 225 MGWRADGGLWLLVRG-----------GGLFLSKG-TGITEEFE-EVPVQSRGFGILDVGYRS-QDEAWAAGGSGVLLKT- 289 (334)
Q Consensus 225 ~~~~~~g~~~~~~~~-----------g~i~~S~D-~G~tW~w~-~~~~~~~~~~~~~v~~~~-~~~~~~~G~~G~i~~S- 289 (334)
+.+.++|.+|++... +.|++-.- .++ .. .+..+.. .....+++.+ ++.+|++.. .+++-
T Consensus 177 i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~~g-~~p~~la~~~d~~~lyv~~~--~v~~~d 250 (328)
T 3dsm_A 177 LVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFKLG-DWPSEVQLNGTRDTLYWINN--DIWRMP 250 (328)
T ss_dssp CEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECCTT-CCCEEEEECTTSCEEEEESS--SEEEEE
T ss_pred eEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecCCC-CCceeEEEecCCCEEEEEcc--EEEEEE
Confidence 455677888887643 35655432 232 22 2233221 1346777775 456777543 55443
Q ss_pred cCCCcCcEEcccCCCcccceeEEEEee-CCeEEEEe-----CCeeEEEEc
Q 036387 290 TNGGKTWIREKAADNIAANLYSVKFIN-EKKGFVLG-----NDGVLLQYL 333 (334)
Q Consensus 290 ~DgG~tW~~~~~~~~~~~~l~~i~~~~-~~~~~a~G-----~~G~il~s~ 333 (334)
.+.|+- .............+.|++.+ ++++|++. .+|.|.+.+
T Consensus 251 ~~t~~~-~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 251 VEADRV-PVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp TTCSSC-CSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred CCCCce-eeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 333432 11111000124678898885 78899986 567777654
No 218
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=41.22 E-value=2.1e+02 Score=25.99 Aligned_cols=106 Identities=8% Similarity=-0.045 Sum_probs=54.0
Q ss_pred EeeeeEeecCCEEEEE-cCCeEEEec-CCCcceeeE-ec-cccCCCeeeEEEEeecC---CeEEEE-eCCCcEEE-EcCC
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLFLSK-GTGITEEFE-EV-PVQSRGFGILDVGYRSQ---DEAWAA-GGSGVLLK-TTNG 292 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~~S~-D~G~tW~w~-~~-~~~~~~~~~~~v~~~~~---~~~~~~-G~~G~i~~-S~Dg 292 (334)
+..+.|.+++..++++ .++.++.-. ..+.. .. .. .+......+.++.|.++ +..+++ +.++.|.. ..+.
T Consensus 152 v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~--~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~ 229 (450)
T 2vdu_B 152 PNAISIAEDDTTVIIADKFGDVYSIDINSIPE--EKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ 229 (450)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTSCCC--SSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC
T ss_pred ceEEEEcCCCCEEEEEeCCCcEEEEecCCccc--ccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC
Confidence 4567778888755554 445554321 22221 00 00 11111125778888877 765555 44665532 2233
Q ss_pred CcCcEEcccCCCcccceeEEEEeeCCe-EEEEeCCeeEEEE
Q 036387 293 GKTWIREKAADNIAANLYSVKFINEKK-GFVLGNDGVLLQY 332 (334)
Q Consensus 293 G~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~~G~il~s 332 (334)
++.=..+.. .-...+.+++|. ++. ++.++.+|.|.-+
T Consensus 230 ~~~~~~~~~--~h~~~v~~~~~s-d~~~l~s~~~d~~v~vw 267 (450)
T 2vdu_B 230 CFIVDKWLF--GHKHFVSSICCG-KDYLLLSAGGDDKIFAW 267 (450)
T ss_dssp TTCEEEECC--CCSSCEEEEEEC-STTEEEEEESSSEEEEE
T ss_pred Cceeeeeec--CCCCceEEEEEC-CCCEEEEEeCCCeEEEE
Confidence 432222121 123578899998 555 4455678877654
No 219
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=40.57 E-value=1.7e+02 Score=24.88 Aligned_cols=188 Identities=9% Similarity=-0.003 Sum_probs=86.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEE-EEcCCEEEEE-cC
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWI-VGKPAILLHT-SD 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~-vG~~g~i~~S-~D 190 (334)
..+.+|+|.| |.+.++.++.+|.|.. ....++.=..+.... ..+..+.|.+ +..++ .+..+.|..- .+
T Consensus 14 ~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~ 85 (304)
T 2ynn_A 14 DRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTE-------TPVRAGKFIARKNWIIVGSDDFRIRVFNYN 85 (304)
T ss_dssp SCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------SCEEEEEEEGGGTEEEEEETTSEEEEEETT
T ss_pred CceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccC-------CcEEEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 4689999998 4566666666776432 222222111111111 1467778874 33344 4455543322 12
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.|+.-..+. .|. ..+..+.+.+++..++.+ .++.|. +....+. .... ........+..
T Consensus 86 ~~~~~~~~~-------------~h~----~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~--~~~~-~~~~h~~~v~~ 145 (304)
T 2ynn_A 86 TGEKVVDFE-------------AHP----DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW--ALEQ-TFEGHEHFVMC 145 (304)
T ss_dssp TCCEEEEEE-------------CCS----SCEEEEEECSSSSEEEEEETTSCEEEEEGGGTT--EEEE-EECCCCSCEEE
T ss_pred CCcEEEEEe-------------CCC----CcEEEEEEcCCCCEEEEECCCCeEEEEECCCCc--chhh-hhcccCCcEEE
Confidence 222211111 111 135567788887766554 455442 2222221 1111 11111235788
Q ss_pred EEeec-CCeEEE-EeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEee--CC-eEEEEeCCeeEEEE
Q 036387 269 VGYRS-QDEAWA-AGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFIN--EK-KGFVLGNDGVLLQY 332 (334)
Q Consensus 269 v~~~~-~~~~~~-~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~--~~-~~~a~G~~G~il~s 332 (334)
++|.+ ++..++ .+.+|.|.. ....++.=..+.. .....+..+.+.+ ++ .++.++.+|.|..+
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTT--GQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEEC--CCTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCccceecc--CCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 88875 344444 455676522 2222221111211 1124566676653 34 45556688877654
No 220
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=40.43 E-value=1.7e+02 Score=24.86 Aligned_cols=64 Identities=16% Similarity=0.149 Sum_probs=34.2
Q ss_pred eeEEEE----eecCCeEEEE-eCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEee----CCeEEEEeCCeeEEEE
Q 036387 265 GILDVG----YRSQDEAWAA-GGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFIN----EKKGFVLGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~----~~~~~~~~~~-G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~~----~~~~~a~G~~G~il~s 332 (334)
.+.++. |.+++..+++ +.+|.|. .....++. .... .....+.++.+.+ ++.+++++.+|.|..+
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~ 239 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMAL---RWET-NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVF 239 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEE---EEEE-ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCce---eeec-CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEE
Confidence 456666 4445555554 4557653 23333332 1111 1235789999985 4445556678876543
No 221
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=39.94 E-value=1.9e+02 Score=25.12 Aligned_cols=202 Identities=10% Similarity=0.067 Sum_probs=96.9
Q ss_pred eeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCc-Ce-EeCcC---CCCcccCcceeEEEEEEeC--CeEEEEEc--CCEE
Q 036387 116 VLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGK-TW-APRSI---PSAEEEDFNYRFNSISFKG--KEGWIVGK--PAIL 185 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~-TW-~~~~~---p~~~~~~~~~~~~~I~~~~--~~~~~vG~--~g~i 185 (334)
...+|++.++ .++|++.. .+.|++-.-.|+ .. ..+.. +...... ......|++++ +.+|++.. .+.|
T Consensus 92 ~p~gia~d~~--g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~-~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 92 LPHGLSIDTD--GNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNH-FCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp SEEEEEECTT--SCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTC-CSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred CceEEEECCC--CCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccc-cCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 4678999763 45787765 355555333333 11 11111 1100010 11356788874 67887763 5667
Q ss_pred EEEcCCCCCeEEeecCCCC--CCCcccccccCccccceEeeeeEeec-CCEEEEEcC-CeEEE-ecCCCcceeeEecccc
Q 036387 186 LHTSDAGESWERIPLSSQL--PGDMAFWQPHNRAVARRIQNMGWRAD-GGLWLLVRG-GGLFL-SKGTGITEEFEEVPVQ 260 (334)
Q Consensus 186 ~~S~DgG~TW~~~~~~~~l--~g~~~~~~~~~~~~~~~i~~~~~~~~-g~~~~~~~~-g~i~~-S~D~G~tW~w~~~~~~ 260 (334)
.+-+-.|+.-..+.....- +....+. ....+.+.++ +.+|++... +.|.+ ..+.|+- -..+..+
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~---------~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~--~~~~~~~ 237 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFS---------VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF--VREIKHA 237 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEES---------CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE--EEEECCT
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccC---------CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE--EEEEecc
Confidence 6665555543333211000 0000111 1234667777 778887743 34443 3443541 2223222
Q ss_pred CCCeeeEEEEeecCCeEEEEeCC--------CcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEe-CCeeEE
Q 036387 261 SRGFGILDVGYRSQDEAWAAGGS--------GVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLG-NDGVLL 330 (334)
Q Consensus 261 ~~~~~~~~v~~~~~~~~~~~G~~--------G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G~il 330 (334)
..+...++++|.+ +.+++.... ..++. ....|+--..+...........+|++.+++.+|++. .++.|.
T Consensus 238 ~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~ 316 (329)
T 3fvz_A 238 SFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVW 316 (329)
T ss_dssp TTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEE
T ss_pred ccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEE
Confidence 2222456777765 555554221 12322 223344333332111122457899998888999875 455565
Q ss_pred EE
Q 036387 331 QY 332 (334)
Q Consensus 331 ~s 332 (334)
+.
T Consensus 317 ~~ 318 (329)
T 3fvz_A 317 KF 318 (329)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 222
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=39.55 E-value=2.3e+02 Score=26.11 Aligned_cols=101 Identities=11% Similarity=0.058 Sum_probs=54.0
Q ss_pred eeEee--cCCEEEEEcCCeEEEecCCCcceeeEeccccCCCeeeEEEEeecCCe-EEEEeCC------CcEEEEcCCCcC
Q 036387 225 MGWRA--DGGLWLLVRGGGLFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE-AWAAGGS------GVLLKTTNGGKT 295 (334)
Q Consensus 225 ~~~~~--~g~~~~~~~~g~i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~------G~i~~S~DgG~t 295 (334)
+.+.+ ++.+|++...+.|++-.-.+.. ...+... .....++++..++. +|++... ..++...+++..
T Consensus 142 lavdp~~~g~Lyv~d~~~~I~~id~~~~~--v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~ 217 (430)
T 3tc9_A 142 LSFDPKNHNHLYLVGEQHPTRLIDFEKEY--VSTVYSG--LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFK 217 (430)
T ss_dssp EEEETTEEEEEEEEEBTEEEEEEETTTTE--EEEEECC--CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSC
T ss_pred EEECCCCCCeEEEEeCCCcEEEEECCCCE--EEEEecC--CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCcee
Confidence 45563 4678888766666654433322 2222211 12456788776655 8887542 233455555433
Q ss_pred cEE-cccCCCcccceeEEEEee-CCeEEEEe-CCeeEEEEc
Q 036387 296 WIR-EKAADNIAANLYSVKFIN-EKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 296 W~~-~~~~~~~~~~l~~i~~~~-~~~~~a~G-~~G~il~s~ 333 (334)
... +.. ..+...+++.+ ++.+|++- .++.|++.+
T Consensus 218 ~~~~l~~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~ 254 (430)
T 3tc9_A 218 VITELTK----GQNCNGAETHPINGELYFNSWNAGQVFRYD 254 (430)
T ss_dssp SEEEEEE----CSSCCCEEECTTTCCEEEEETTTTEEEEEE
T ss_pred eeeeecc----CCCceEEEEeCCCCEEEEEECCCCEEEEEE
Confidence 222 221 23456777776 67788764 455666653
No 223
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=39.26 E-value=2.2e+02 Score=25.81 Aligned_cols=121 Identities=8% Similarity=0.064 Sum_probs=58.8
Q ss_pred eEEEEEEeC-CeEEEEEc-C-CEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCC
Q 036387 165 RFNSISFKG-KEGWIVGK-P-AILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGG 240 (334)
Q Consensus 165 ~~~~I~~~~-~~~~~vG~-~-g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g 240 (334)
..++|.++. .+.|+.+. . +.|+|=+-.|+.=...... .+.... ...++.+++.+++.++++. ..+
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~--~~~~~~---------~~G~nGIv~~pdg~~Liv~~~~g 206 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWE--SGNGGQ---------RPGYSGITFDPHSNKLIAFGGPR 206 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEEC--CCCSSS---------CCSCSEEEEETTTTEEEEESSSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeec--CCCccc---------ccCcceEEEeCCCCEEEEEcCCC
Confidence 477888885 78998654 4 6677766556532221111 010000 0123456778888766554 445
Q ss_pred eEEEecCCCcceeeEecccc--C---CCeeeEE-EEeecCCeEEEEeC--CC-cEEEEcCCCcCcEEccc
Q 036387 241 GLFLSKGTGITEEFEEVPVQ--S---RGFGILD-VGYRSQDEAWAAGG--SG-VLLKTTNGGKTWIREKA 301 (334)
Q Consensus 241 ~i~~S~D~G~tW~w~~~~~~--~---~~~~~~~-v~~~~~~~~~~~G~--~G-~i~~S~DgG~tW~~~~~ 301 (334)
.|++-.=. ..=.| +++.. . .....-+ +....+++++++.. .+ .+++|.|+ |+....
T Consensus 207 ~L~~fD~~-~pv~~-~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg---W~sa~~ 271 (334)
T 2p9w_A 207 ALTAFDVS-KPYAW-PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN---WKSANI 271 (334)
T ss_dssp SEEEEECS-SSSCC-CEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST---TSEEEE
T ss_pred eEEEEcCC-CCcce-eecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC---cceeEE
Confidence 56653211 11011 12221 0 0011122 23334667655433 33 45888886 888654
No 224
>3qc2_A Glycosyl hydrolase; 5-bladed beta propeller fold, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: PGE; 2.30A {Bacteroides ovatus}
Probab=38.09 E-value=2.4e+02 Score=25.80 Aligned_cols=16 Identities=19% Similarity=0.281 Sum_probs=11.0
Q ss_pred EEEEEcCCCCCeEEeec
Q 036387 184 ILLHTSDAGESWERIPL 200 (334)
Q Consensus 184 ~i~~S~DgG~TW~~~~~ 200 (334)
++.+|+| |-+|++...
T Consensus 87 g~A~S~D-Gi~w~~~~~ 102 (364)
T 3qc2_A 87 GYATSTD-GTHFQREKT 102 (364)
T ss_dssp EEEEESS-SSSCEECSS
T ss_pred EEEEeCC-CceeeEcCc
Confidence 3567888 568998643
No 225
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=37.52 E-value=2.2e+02 Score=25.34 Aligned_cols=66 Identities=8% Similarity=-0.094 Sum_probs=36.1
Q ss_pred eeEEEEeecCCeEEEE-eCCCcEE-EEcCCCcCcEEcccCCCcccceeEEEEe----eCCeEEEE-eCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAA-GGSGVLL-KTTNGGKTWIREKAADNIAANLYSVKFI----NEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~i~-~S~DgG~tW~~~~~~~~~~~~l~~i~~~----~~~~~~a~-G~~G~il~s 332 (334)
.+.+++|.+++..+++ +.+|.|. .....++.-..+.. .....+.++.+. +++..+++ +.+|.|..+
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iw 288 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSF--GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIW 288 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBC--TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEec--CCCCceEEEEeccccCCCccEEEEEcCCCcEEEE
Confidence 5788888776665554 5567552 23333332222222 123468888554 34555555 467766544
No 226
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=37.48 E-value=1.8e+02 Score=24.38 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=33.8
Q ss_pred eeEEEEeecCCeEEEEeCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEeCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAAGGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~~G~il~s 332 (334)
...++.+.+++..++++ ++.|+. ..+.++.=+.+.. .....++++.++++ +|+++.+|.|..+
T Consensus 242 ~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~----~~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPL----PHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp CEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEEC----SSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred ceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecC----CCceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 34567777665443334 455433 2233322222222 24567888887665 6777777776654
No 227
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=37.31 E-value=1.9e+02 Score=24.60 Aligned_cols=196 Identities=7% Similarity=0.043 Sum_probs=93.5
Q ss_pred CCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEE
Q 036387 99 EALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGW 177 (334)
Q Consensus 99 DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~ 177 (334)
+|-.-|+.-. +.. ...+++++.|+ .++++.+..+......+|-.-|+-.. +.. ..+..+.+.+ .+.+
T Consensus 24 tG~~~w~~~~-~~~--~~~~~~~~~pd--G~ilvs~~~~V~~~d~~G~~~W~~~~-~~~------~~~~~~~~~~dG~~l 91 (276)
T 3no2_A 24 TKEIVWEYPL-EKG--WECNSVAATKA--GEILFSYSKGAKMITRDGRELWNIAA-PAG------CEMQTARILPDGNAL 91 (276)
T ss_dssp TTEEEEEEEC-CTT--CCCCEEEECTT--SCEEEECBSEEEEECTTSCEEEEEEC-CTT------CEEEEEEECTTSCEE
T ss_pred CCeEEEEeCC-Ccc--CCCcCeEECCC--CCEEEeCCCCEEEECCCCCEEEEEcC-CCC------ccccccEECCCCCEE
Confidence 4444576532 111 24678888873 45565544444444556666786532 211 1345555553 4444
Q ss_pred EE-Ec-CCEEEE-EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEEc-CCeEEE-ecCCCcce
Q 036387 178 IV-GK-PAILLH-TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLVR-GGGLFL-SKGTGITE 252 (334)
Q Consensus 178 ~v-G~-~g~i~~-S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~-~g~i~~-S~D~G~tW 252 (334)
++ .. .+.|+. ..||-.-|+.-... ...+ .+..+ ..+.+.++|.++++.. ++.|+. ..++-.-|
T Consensus 92 v~~~~~~~~v~~vd~~Gk~l~~~~~~~-~~~~--~~~~~---------~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w 159 (276)
T 3no2_A 92 VAWCGHPSTILEVNMKGEVLSKTEFET-GIER--PHAQF---------RQINKNKKGNYLVPLFATSEVREIAPNGQLLN 159 (276)
T ss_dssp EEEESTTEEEEEECTTSCEEEEEEECC-SCSS--GGGSC---------SCCEECTTSCEEEEETTTTEEEEECTTSCEEE
T ss_pred EEecCCCCEEEEEeCCCCEEEEEeccC-CCCc--ccccc---------cCceECCCCCEEEEecCCCEEEEECCCCCEEE
Confidence 44 33 455554 45655566653211 1111 11101 1123356777776653 455543 44433344
Q ss_pred eeEeccccCCCeeeEEEEeecCCeEEEEeCC-CcE-EEEcC-CCcCcEEcccC-CC-cccceeEEEEeeCCeEEEEe
Q 036387 253 EFEEVPVQSRGFGILDVGYRSQDEAWAAGGS-GVL-LKTTN-GGKTWIREKAA-DN-IAANLYSVKFINEKKGFVLG 324 (334)
Q Consensus 253 ~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~~-G~i-~~S~D-gG~tW~~~~~~-~~-~~~~l~~i~~~~~~~~~a~G 324 (334)
++... . ..+++.+..++.+++++.. +.| -...+ |-.-|+.-... ++ .-.....+...+++++|++.
T Consensus 160 ~~~~~---~---~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 160 SVKLS---G---TPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEECS---S---CCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEECC---C---CccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 43331 1 1223444455666665443 334 33344 44557775431 11 11234566666778888776
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=37.16 E-value=2.4e+02 Score=25.66 Aligned_cols=109 Identities=8% Similarity=0.010 Sum_probs=56.5
Q ss_pred eeeEee-cCCEEEEEcCCeEEEec-CCCcceeeEeccccC-CCeeeE-EEEeec-CCeEEEEeC-CCcEEEEcCCCcCcE
Q 036387 224 NMGWRA-DGGLWLLVRGGGLFLSK-GTGITEEFEEVPVQS-RGFGIL-DVGYRS-QDEAWAAGG-SGVLLKTTNGGKTWI 297 (334)
Q Consensus 224 ~~~~~~-~g~~~~~~~~g~i~~S~-D~G~tW~w~~~~~~~-~~~~~~-~v~~~~-~~~~~~~G~-~G~i~~S~DgG~tW~ 297 (334)
.+++.+ ++.+|+...++.|++-. +.+..-.+....... ....-+ ++++.+ ++.+|++.. .+.|++-.-.|+ -.
T Consensus 223 ~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~ 301 (409)
T 3hrp_A 223 AVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CE 301 (409)
T ss_dssp BCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EE
T ss_pred EEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EE
Confidence 355666 56788866666677654 333310111111111 111112 777776 588888754 456766543343 22
Q ss_pred EcccCC---C---------cccceeEEEEeeCCeEEEEeC--CeeEEEEc
Q 036387 298 REKAAD---N---------IAANLYSVKFINEKKGFVLGN--DGVLLQYL 333 (334)
Q Consensus 298 ~~~~~~---~---------~~~~l~~i~~~~~~~~~a~G~--~G~il~s~ 333 (334)
.+.... + .-....+|++.+++++|++-. +..|.+.+
T Consensus 302 ~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 302 WFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEE
T ss_pred EEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEE
Confidence 221100 0 012367888888888888853 55565543
No 229
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=36.94 E-value=2.2e+02 Score=25.00 Aligned_cols=67 Identities=13% Similarity=0.142 Sum_probs=40.8
Q ss_pred eeEEEEeecCCeEEEE-eCCCc-E-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 265 GILDVGYRSQDEAWAA-GGSGV-L-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~~~~~~-G~~G~-i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
.+.+++|.+++..+++ +.+|. | +.....|+.=..+... .-...+++++|.++++.+++ +.+|.|..+
T Consensus 197 ~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g-~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw 267 (355)
T 3vu4_A 197 PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG-LDRADVVDMKWSTDGSKLAVVSDKWTLHVF 267 (355)
T ss_dssp CEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT-TCCSCEEEEEECTTSCEEEEEETTCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC-CCCCcEEEEEECCCCCEEEEEECCCEEEEE
Confidence 5788999887776665 45675 4 2233334333333310 02367999999987776655 577876644
No 230
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=36.89 E-value=2.1e+02 Score=24.91 Aligned_cols=181 Identities=10% Similarity=0.050 Sum_probs=86.7
Q ss_pred eeEEEEEecCCCCEEEEEE-cCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEEcC-CEEEEEc-
Q 036387 116 VLLDIAFVPDDLNHGFLLG-TRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVGKP-AILLHTS- 189 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG-~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG~~-g~i~~S~- 189 (334)
.+.+++|.| +.+.+++.+ .++.|.. ....|+--..+..+. .+..+.+.+ +.+++.+.. +.|+.-+
T Consensus 33 ~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--------~v~~~~~spdg~~l~~~~~~~~~v~v~d~ 103 (391)
T 1l0q_A 33 NPMGAVISP-DGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--------SPQGVAVSPDGKQVYVTNMASSTLSVIDT 103 (391)
T ss_dssp SEEEEEECT-TSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CcceEEECC-CCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--------CccceEECCCCCEEEEEECCCCEEEEEEC
Confidence 478899987 556676666 3555433 222333222222111 366788874 456666643 5444332
Q ss_pred CCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEc-CCeEEEe-cCCCcceeeEeccccCCCeee
Q 036387 190 DAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVR-GGGLFLS-KGTGITEEFEEVPVQSRGFGI 266 (334)
Q Consensus 190 DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~-~g~i~~S-~D~G~tW~w~~~~~~~~~~~~ 266 (334)
+.++.-..+... ..+..+.+.+++. +|+++. ++.|+.- ...++. ...+... ...
T Consensus 104 ~~~~~~~~~~~~------------------~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~~~---~~~ 160 (391)
T 1l0q_A 104 TSNTVAGTVKTG------------------KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV--INTVSVG---RSP 160 (391)
T ss_dssp TTTEEEEEEECS------------------SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEECC---SSE
T ss_pred CCCeEEEEEeCC------------------CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEecC---CCc
Confidence 223222211110 0133466777776 445544 4555432 233331 1111111 234
Q ss_pred EEEEeecCC-eEEEEeC-CCcEEEE-cCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEe---CCeeEEEE
Q 036387 267 LDVGYRSQD-EAWAAGG-SGVLLKT-TNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLG---NDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~~~-~~~~~G~-~G~i~~S-~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G---~~G~il~s 332 (334)
..+.|.+++ .+|+++. ++.|+.- ...+ +.+... .....+..+++.++++ +++++ .++.|..+
T Consensus 161 ~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~---~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 161 KGIAVTPDGTKVYVANFDSMSISVIDTVTN---SVIDTV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCC---eEEEEE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 677777655 5656544 4555332 2223 333221 1234678888887665 45444 46666554
No 231
>2blf_A SORA, sulfite\:cytochrome C oxidoreductase subunit A; sulfite oxidase, molybdopterin, C-type cytochrome, heme, electron transport; HET: MSS HEC; 1.8A {Starkeya novella} PDB: 2bpb_A* 2c9x_A* 2ca3_A* 2ca4_A*
Probab=36.59 E-value=23 Score=33.00 Aligned_cols=17 Identities=24% Similarity=0.634 Sum_probs=14.3
Q ss_pred EEEEcCCCcCeEeCcCC
Q 036387 139 LLETKDGGKTWAPRSIP 155 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~p 155 (334)
+-.|.|||+||+...+.
T Consensus 297 VEVS~DgG~tW~~A~l~ 313 (373)
T 2blf_A 297 VSVSADAGKSWTNATLD 313 (373)
T ss_dssp EEEESSTTSSCEECEEC
T ss_pred EEEEeCCCCCceEeEeC
Confidence 66799999999987764
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=36.18 E-value=2.2e+02 Score=24.88 Aligned_cols=203 Identities=11% Similarity=0.049 Sum_probs=96.2
Q ss_pred eeeEEEEEecCCCCEEEEEEcC------CeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC--CeEEEEEc----
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTR------QTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG--KEGWIVGK---- 181 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~------g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~--~~~~~vG~---- 181 (334)
...++|++.++ +++|++... ..|++ ..+.|+--..+..+..... ....+..|.+++ +.+|+...
T Consensus 67 ~~p~gv~~d~~--g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~-~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 67 DTVLGIKSDGN--GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITL-SNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp SCEEEEEECSS--SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSC-TTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred eEeeEEEEcCC--CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcc-cccccceEEEecCCCEEEEEcCccCC
Confidence 45788999753 788987632 45544 3344552333333321100 112456788873 57777643
Q ss_pred -CCEEEEEcCCCCCeEEeecCCC-CCCCccccc---------ccCcc--ccceEeeeeEeecCC-EEEEEcCC-eEEEec
Q 036387 182 -PAILLHTSDAGESWERIPLSSQ-LPGDMAFWQ---------PHNRA--VARRIQNMGWRADGG-LWLLVRGG-GLFLSK 246 (334)
Q Consensus 182 -~g~i~~S~DgG~TW~~~~~~~~-l~g~~~~~~---------~~~~~--~~~~i~~~~~~~~g~-~~~~~~~g-~i~~S~ 246 (334)
.+.+....+.|+.|..+..... .+....+.. +.... .......+++++++. +|+....+ .+|+-.
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 2334445567888887642100 010011100 00000 001234566777775 56554443 455432
Q ss_pred -----CCCcc----e-eeEeccccCCCeeeEEEEeecCCeEEEEeC-CCcEEE-EcCCCcCcEEcccCCCcccceeEEEE
Q 036387 247 -----GTGIT----E-EFEEVPVQSRGFGILDVGYRSQDEAWAAGG-SGVLLK-TTNGGKTWIREKAADNIAANLYSVKF 314 (334)
Q Consensus 247 -----D~G~t----W-~w~~~~~~~~~~~~~~v~~~~~~~~~~~G~-~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~ 314 (334)
++..+ + .+...... + ...++++..++.+|++.. .+.|++ ....|+ .+.+... +......+|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~g~~--g-~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~-~~~~~p~~va~ 298 (343)
T 2qe8_A 224 SADLSNLQLTDAELGSKIERYSEK--P-ICDGISIDKDHNIYVGDLAHSAIGVITSADRA-YKLLVTD-EKLSWTDSFNF 298 (343)
T ss_dssp HHHHTCTTCCHHHHHTTCEEEEEC--C-SCSCEEECTTCCEEEEEGGGTEEEEEETTTTE-EEEEEEC-GGGSCEEEEEE
T ss_pred HHHhcCCCCChhhhhcceEecccC--C-CCceEEECCCCCEEEEccCCCeEEEEECCCCC-EEEEEEC-CceecCCeeEE
Confidence 11100 0 00000000 0 122466666788888754 344543 331353 5554431 11245678898
Q ss_pred eeCCeEEEEeC
Q 036387 315 INEKKGFVLGN 325 (334)
Q Consensus 315 ~~~~~~~a~G~ 325 (334)
.+++++|++..
T Consensus 299 ~~~g~l~v~~~ 309 (343)
T 2qe8_A 299 GSDGYLYFDCN 309 (343)
T ss_dssp CTTSCEEEEEC
T ss_pred CCCCcEEEEeC
Confidence 87888998865
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=34.61 E-value=2.3e+02 Score=24.70 Aligned_cols=77 Identities=10% Similarity=0.056 Sum_probs=42.3
Q ss_pred EeeeeEeecCCEEEEEcC------CeEEEe-cCCCcceeeEeccccC----CCeeeEEEEeec-CCeEEEEeC----CCc
Q 036387 222 IQNMGWRADGGLWLLVRG------GGLFLS-KGTGITEEFEEVPVQS----RGFGILDVGYRS-QDEAWAAGG----SGV 285 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~~~------g~i~~S-~D~G~tW~w~~~~~~~----~~~~~~~v~~~~-~~~~~~~G~----~G~ 285 (334)
...+.+.+++.+|++... ..|++- .+.|+- ...+..+. ....+.++++.. .+.+|++.. .+.
T Consensus 69 p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 69 VLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp EEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeE--EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 345667778889988743 466553 344541 12222221 112346777764 568888743 233
Q ss_pred E-EEEcCCCcCcEEcc
Q 036387 286 L-LKTTNGGKTWIREK 300 (334)
Q Consensus 286 i-~~S~DgG~tW~~~~ 300 (334)
| ....+.|+.|+.+.
T Consensus 147 i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQ 162 (343)
T ss_dssp EEEEETTTCCEEEECT
T ss_pred EEEEECCCCCEEEEec
Confidence 3 44556677787653
No 234
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=33.21 E-value=2.7e+02 Score=25.07 Aligned_cols=208 Identities=8% Similarity=0.026 Sum_probs=104.0
Q ss_pred ceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEc-CCeEEEEcCCCcCeEeCcCCCCcccCcceeEEEEEE
Q 036387 93 QPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGT-RQTLLETKDGGKTWAPRSIPSAEEEDFNYRFNSISF 171 (334)
Q Consensus 93 ~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~-~g~i~~S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~ 171 (334)
.|.+-.-.+...+.+.... ....+|++.+ ..+.+|.+.. .+.|++-.=.|...+.+...... ....|++
T Consensus 97 ~I~~i~~~~~~~~~~~~~~---~~~~gl~~d~-~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~------~p~glav 166 (386)
T 3v65_B 97 DIRQVLPHRSEYTLLLNNL---ENAIALDFHH-RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE------SPGGLAV 166 (386)
T ss_dssp CEEEECTTSCCCEEEECSC---SCEEEEEEET-TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS------CCCCEEE
T ss_pred cceeeccCCCcEEEEecCC---CccEEEEEec-CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC------CccEEEE
Confidence 3655544455555544322 3567889876 3477777653 45677654344444443221110 1234666
Q ss_pred e--CCeEEEEEc-CCEEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeec-CCEEEEEcC--CeEEEe
Q 036387 172 K--GKEGWIVGK-PAILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRAD-GGLWLLVRG--GGLFLS 245 (334)
Q Consensus 172 ~--~~~~~~vG~-~g~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~-g~~~~~~~~--g~i~~S 245 (334)
+ .+.+|+.-. ...|.+.+=.|..-+.+... .+. ....+++.+. +.+|.+... +.|++.
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~-~l~---------------~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ-SLE---------------KPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSCEEEECS-SCS---------------CEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecC-CCC---------------CCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 6 366666543 35666655444433333211 010 1123455543 456666532 568876
Q ss_pred cCCCcceeeEeccccCCCeeeEEEEee-cCCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 246 KGTGITEEFEEVPVQSRGFGILDVGYR-SQDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 246 ~D~G~tW~w~~~~~~~~~~~~~~v~~~-~~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
.-+|.. -+.+. ........++++. ..+.+|++-. .+.|++..=.|..=+.+... . .....+|++ +++.+|.+
T Consensus 231 ~~dG~~--~~~~~-~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~-~-~~~P~giav-~~~~ly~t 304 (386)
T 3v65_B 231 SMDGSG--RRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQ-G-LPHPFAITV-FEDSLYWT 304 (386)
T ss_dssp ETTSCS--CEEEE-CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECS-S-CSSEEEEEE-ETTEEEEE
T ss_pred eCCCCC--cEEEE-ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEEC-C-CCCceEEEE-ECCEEEEe
Confidence 655542 12211 1111124577776 4678888744 45676554234332333221 1 245678887 46677766
Q ss_pred e-CCeeEEEE
Q 036387 324 G-NDGVLLQY 332 (334)
Q Consensus 324 G-~~G~il~s 332 (334)
- ..+.|.+.
T Consensus 305 d~~~~~V~~~ 314 (386)
T 3v65_B 305 DWHTKSINSA 314 (386)
T ss_dssp ETTTTEEEEE
T ss_pred eCCCCeEEEE
Confidence 4 45566654
No 235
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=32.84 E-value=2.1e+02 Score=25.57 Aligned_cols=24 Identities=8% Similarity=0.239 Sum_probs=16.8
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTL 139 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i 139 (334)
..+.+|+|.| +.+.++.++.+|.|
T Consensus 112 ~~v~~~~~~~-~~~~l~s~s~dg~i 135 (437)
T 3gre_A 112 STVTQITMIP-NFDAFAVSSKDGQI 135 (437)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEE
T ss_pred CCEEEEEEeC-CCCEEEEEeCCCEE
Confidence 5688999987 45566666666753
No 236
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=32.18 E-value=2.5e+02 Score=24.34 Aligned_cols=136 Identities=12% Similarity=0.051 Sum_probs=67.6
Q ss_pred EEEEEEeCCeEEEEEc-CCEEEE-EcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeE
Q 036387 166 FNSISFKGKEGWIVGK-PAILLH-TSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGL 242 (334)
Q Consensus 166 ~~~I~~~~~~~~~vG~-~g~i~~-S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i 242 (334)
...|.+.++.+|++.. .+.|.. -.+.++.=..+... . ....+.+.+++.+|++. .++.|
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~-----~-------------~p~~i~~~~~g~lyv~~~~~~~v 107 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGF-----T-------------SPRYIHFLSDEKAYVTQIWDYRI 107 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECC-----S-------------SEEEEEEEETTEEEEEEBSCSEE
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCC-----C-------------CCcEEEEeCCCeEEEEECCCCeE
Confidence 4567777888998865 344444 22223322222211 0 11235555777888877 55666
Q ss_pred EEec-CCCcceeeEeccccCC---CeeeEEEEeecCCeEEEEeC--CCcEEE-EcCCCcCcEEcccCCCcccceeEEEEe
Q 036387 243 FLSK-GTGITEEFEEVPVQSR---GFGILDVGYRSQDEAWAAGG--SGVLLK-TTNGGKTWIREKAADNIAANLYSVKFI 315 (334)
Q Consensus 243 ~~S~-D~G~tW~w~~~~~~~~---~~~~~~v~~~~~~~~~~~G~--~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~ 315 (334)
++-. ..++- -..++.... ......+++ +++.+|++.. .+.|++ -.+.++--+.+.. ......+.+.
T Consensus 108 ~~iD~~t~~~--~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~----g~~p~~i~~~ 180 (328)
T 3dsm_A 108 FIINPKTYEI--TGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTI----GIQPTSLVMD 180 (328)
T ss_dssp EEEETTTTEE--EEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEEC----SSCBCCCEEC
T ss_pred EEEECCCCeE--EEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc----CCCccceEEc
Confidence 6543 22321 112222210 001224444 5788888853 455533 2233432223333 2345677888
Q ss_pred eCCeEEEEeCC
Q 036387 316 NEKKGFVLGND 326 (334)
Q Consensus 316 ~~~~~~a~G~~ 326 (334)
+++++|++...
T Consensus 181 ~dG~l~v~~~~ 191 (328)
T 3dsm_A 181 KYNKMWTITDG 191 (328)
T ss_dssp TTSEEEEEBCC
T ss_pred CCCCEEEEECC
Confidence 88898888654
No 237
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=31.43 E-value=2.8e+02 Score=24.60 Aligned_cols=106 Identities=15% Similarity=0.132 Sum_probs=53.2
Q ss_pred EeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEEEEeec-CCeEEEE-eCCCcE-EEEcCCCcCc
Q 036387 222 IQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILDVGYRS-QDEAWAA-GGSGVL-LKTTNGGKTW 296 (334)
Q Consensus 222 i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~-~~~~~~~-G~~G~i-~~S~DgG~tW 296 (334)
+..+.|.+++..++.+ .++.|. +....++. -...... ..+..+.+.+ ++..+++ +.+|.| +.....|+.=
T Consensus 168 v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~--~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~ 242 (393)
T 1erj_A 168 IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC--SLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLV 242 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEE--EEEEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEECCCCee--EEEEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 5567777777755544 455443 22233321 1111111 2456777765 4555554 456655 2223334322
Q ss_pred EEcccC----CCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 297 IREKAA----DNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 297 ~~~~~~----~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
+.+... ..-...+++++|.++++.+++ +.+|.|..+
T Consensus 243 ~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 243 ERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp EEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 222110 012356899999887776655 567876543
No 238
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=31.30 E-value=2.4e+02 Score=23.82 Aligned_cols=104 Identities=12% Similarity=0.151 Sum_probs=52.5
Q ss_pred eeeEeecCC-EEEEEcC-Ce---EEEecCCCcceeeEeccccCCCeeeEEEEeecCCe-EEEEeC-CCcEE-EEcCCCcC
Q 036387 224 NMGWRADGG-LWLLVRG-GG---LFLSKGTGITEEFEEVPVQSRGFGILDVGYRSQDE-AWAAGG-SGVLL-KTTNGGKT 295 (334)
Q Consensus 224 ~~~~~~~g~-~~~~~~~-g~---i~~S~D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~-~~~~G~-~G~i~-~S~DgG~t 295 (334)
.+.+.+++. +|++... +. +|.-...|.-..-....++. ......+.|.+++. +|+++. .+.|+ ...+.|+.
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG-GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS-SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC-CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 466778876 6666432 33 44444444311111111111 12356777877664 777664 44442 23344554
Q ss_pred ---cEEcccCCCcccceeEEEEeeCCe-EEEEeC-CeeEEEE
Q 036387 296 ---WIREKAADNIAANLYSVKFINEKK-GFVLGN-DGVLLQY 332 (334)
Q Consensus 296 ---W~~~~~~~~~~~~l~~i~~~~~~~-~~a~G~-~G~il~s 332 (334)
-..+.. ......+++.++++ +|++.. ++.|...
T Consensus 211 ~~~~~~~~~----~~~~~~~~~spdg~~l~v~~~~~~~i~~~ 248 (331)
T 3u4y_A 211 ITLLNAVGT----NNLPGTIVVSRDGSTVYVLTESTVDVFNF 248 (331)
T ss_dssp CEEEEEEEC----SSCCCCEEECTTSSEEEEECSSEEEEEEE
T ss_pred cceeeeccC----CCCCceEEECCCCCEEEEEEcCCCEEEEE
Confidence 333332 24567888988777 555543 4445443
No 239
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=31.12 E-value=2.9e+02 Score=24.80 Aligned_cols=68 Identities=13% Similarity=0.158 Sum_probs=37.5
Q ss_pred eeEEEEeec-CCeEEEE-eCCCcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEE-EeCCeeEEEE
Q 036387 265 GILDVGYRS-QDEAWAA-GGSGVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKK-GFV-LGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~-~~~~~~~-G~~G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a-~G~~G~il~s 332 (334)
.+.++.|.+ .+.++++ +.+|.|.. ....+...+.+.........+.+|+|.+++. +++ .+.+|.|..+
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vw 305 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 305 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEE
Confidence 578888876 4455554 56776522 2333322222211001235789999987664 554 5677877654
No 240
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=29.24 E-value=2.6e+02 Score=23.57 Aligned_cols=68 Identities=12% Similarity=0.176 Sum_probs=40.7
Q ss_pred eeEEEEeecCC---eEEEE-eCCCcE--EEEcCCCcCcEEcccC-CCcccceeEEEEeeCCeEEE-EeCCeeEEEE
Q 036387 265 GILDVGYRSQD---EAWAA-GGSGVL--LKTTNGGKTWIREKAA-DNIAANLYSVKFINEKKGFV-LGNDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~---~~~~~-G~~G~i--~~S~DgG~tW~~~~~~-~~~~~~l~~i~~~~~~~~~a-~G~~G~il~s 332 (334)
.+.+++|.+++ ..+++ +.++.| |........|...... ......+++++|.++++.+| ++.+|.|.-+
T Consensus 206 ~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw 281 (297)
T 2pm7_B 206 WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (297)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred ceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 57889987653 55554 456654 4443333456543221 12245789999998777665 5678876543
No 241
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=28.94 E-value=3.1e+02 Score=24.43 Aligned_cols=186 Identities=12% Similarity=0.205 Sum_probs=88.4
Q ss_pred EEEEEcCCeEEE-EcCCCcCeEeCcCCCC-cccCcceeEEEEEEe-C----CeEEEEEcCCEEE-EEcCCCCCeEEeecC
Q 036387 130 GFLLGTRQTLLE-TKDGGKTWAPRSIPSA-EEEDFNYRFNSISFK-G----KEGWIVGKPAILL-HTSDAGESWERIPLS 201 (334)
Q Consensus 130 ~~avG~~g~i~~-S~DgG~TW~~~~~p~~-~~~~~~~~~~~I~~~-~----~~~~~vG~~g~i~-~S~DgG~TW~~~~~~ 201 (334)
+|+-+.++.|+. .-|++..|..-..... ......-.+.++.+. + -++|..+..+.|. +.-|+ ..|+.-...
T Consensus 25 Vy~q~~~n~i~e~~~~~~~~W~~~~~~~~~~~~~~~SplAAv~~~~~~~~~i~Vfy~~~dn~l~e~~~~~-~~W~~g~L~ 103 (312)
T 1ofz_A 25 VYFQDLNGKIREAQRGGDNPWTGGSSQNVIGEAKLFSPLAAVTWKSAQGIQIRVYCVNKDNILSEFVYDG-SKWITGQLG 103 (312)
T ss_dssp EEEEBTTSEEEEEEEETTSCCEECSGGGEEEECSTTCCCEEEEEEETTEEEEEEEEECTTCBEEEEEEES-SCEEECGGG
T ss_pred EEEECCCCCEEEEEECCCCCcccCcccccccccccCCCceEEEecCCCCCEEEEEEECCCCcEEEEEecC-CCccccccC
Confidence 466677776544 3444567987443110 000011134555552 2 2567777666555 22333 579885532
Q ss_pred C----CCCCCcccccccCccccceEeeeeEeec----CC--EEEE---EcCCeEE-EecCCCcceeeEec-cccCCCeee
Q 036387 202 S----QLPGDMAFWQPHNRAVARRIQNMGWRAD----GG--LWLL---VRGGGLF-LSKGTGITEEFEEV-PVQSRGFGI 266 (334)
Q Consensus 202 ~----~l~g~~~~~~~~~~~~~~~i~~~~~~~~----g~--~~~~---~~~g~i~-~S~D~G~tW~w~~~-~~~~~~~~~ 266 (334)
. .+++. .|.++.+..+ .. +|.- +.+..|+ +.-| |. |.-... +....+.++
T Consensus 104 ~~~~~~~~~S-------------~lAAvs~~~~~~~~~~i~Vf~q~~~~~dn~I~e~~~~-g~-W~~~~~lg~~~~gT~l 168 (312)
T 1ofz_A 104 SVGVKVGSNS-------------KLAALQWGGSESAPPNIRVYYQKSNLSGSSIHEYVWS-GK-WTAGASFGSTAPGTGI 168 (312)
T ss_dssp GGCCBCCTTC-------------CCEEEEESCBTTBCCEEEEEECSCCSTTEEEEEEEES-SS-EEEEEEEEEESTTCCE
T ss_pred CcccccCCCC-------------cceEEEecCCCCCCCeEEEEEEeccCCCCeEEEEEcc-CC-cccCCCcCCccCCCCc
Confidence 1 01111 1222222211 12 3333 3445553 3444 33 743332 211112245
Q ss_pred EEEEeecC-CeEEEEeCCCcEEEEcCCCcCcEEcccC--CCcccceeEEEEeeCC---eEEEEeCCeeEEEE
Q 036387 267 LDVGYRSQ-DEAWAAGGSGVLLKTTNGGKTWIREKAA--DNIAANLYSVKFINEK---KGFVLGNDGVLLQY 332 (334)
Q Consensus 267 ~~v~~~~~-~~~~~~G~~G~i~~S~DgG~tW~~~~~~--~~~~~~l~~i~~~~~~---~~~a~G~~G~il~s 332 (334)
-++.+... -++|..+.+..|++-.-+|+.|...... ..+...+-++.+ +++ ++|+.+.++.|++.
T Consensus 169 aa~s~~~~~i~vf~q~~dn~i~~~~~d~~~W~~~~~~~~~~p~s~lAavs~-~~~~~i~lf~~~~~n~i~~~ 239 (312)
T 1ofz_A 169 GATAIGPGRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISW-GSTPNIRVYWQKGREELYEA 239 (312)
T ss_dssp EEEEEETTEEEEEEEBTTSEEEEEEESSSCEEEEEEEEECCTTCEEEEEEE-TTTTEEEEEEECTTSCEEEE
T ss_pred ceeecCCCCEEEEEEcCCCcEEEEEecCCcceECCEecCcCCCCCcEEEEe-CCCCEEEEEEECCCCcEEEE
Confidence 55555422 2356667777775444345789876541 122345666666 334 57888888777754
No 242
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=28.07 E-value=2.7e+02 Score=23.38 Aligned_cols=190 Identities=14% Similarity=0.104 Sum_probs=82.1
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-CeEEEE-EcCCEEEEEc-C
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-KEGWIV-GKPAILLHTS-D 190 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~v-G~~g~i~~S~-D 190 (334)
..+.+++|.| +.+.++.++.++.|.. ..+.++.=...... ...+..+.+.+ ...++. +..+.|..-+ .
T Consensus 66 ~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~ 137 (312)
T 4ery_A 66 LGISDVAWSS-DSNLLVSASDDKTLKIWDVSSGKCLKTLKGH-------SNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 137 (312)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred CceEEEEEcC-CCCEEEEECCCCEEEEEECCCCcEEEEEcCC-------CCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 5688999987 4566665666776432 22222211111100 11466777875 444444 4455333221 1
Q ss_pred CCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEEEE-cCCeEE-EecCCCcceeeEeccccCCCeeeEE
Q 036387 191 AGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWLLV-RGGGLF-LSKGTGITEEFEEVPVQSRGFGILD 268 (334)
Q Consensus 191 gG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~-~~g~i~-~S~D~G~tW~w~~~~~~~~~~~~~~ 268 (334)
.++.-..+. .|. ..+..+.+.+++..++++ .++.|. +....++. ...... .....+..
T Consensus 138 ~~~~~~~~~-------------~~~----~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~--~~~~~~-~~~~~~~~ 197 (312)
T 4ery_A 138 TGKCLKTLP-------------AHS----DPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC--LKTLID-DDNPPVSF 197 (312)
T ss_dssp TCCEEEEEC-------------CCS----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE--EEEECC-SSCCCEEE
T ss_pred CCEEEEEec-------------CCC----CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce--eeEEec-cCCCceEE
Confidence 122111111 011 134556777777765554 445442 22222321 111111 11124567
Q ss_pred EEeecCCeEEE-EeCCCcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 269 VGYRSQDEAWA-AGGSGVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 269 v~~~~~~~~~~-~G~~G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
+.|.+++..++ .+.+|.| +.....++.-..+.........+......+++..+++ +.+|.|..+
T Consensus 198 ~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vw 264 (312)
T 4ery_A 198 VKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 264 (312)
T ss_dssp EEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEE
Confidence 77776665544 4556655 2233333322222221111111222222244555544 567776544
No 243
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=27.96 E-value=56 Score=32.00 Aligned_cols=66 Identities=9% Similarity=0.028 Sum_probs=35.4
Q ss_pred eEEEEeecCCeEEEEe-CC---------CcE-EEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 266 ILDVGYRSQDEAWAAG-GS---------GVL-LKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 266 ~~~v~~~~~~~~~~~G-~~---------G~i-~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
+..++|.++++.++.+ .. +.+ ....+.|+. +.+.........+..++|+++++.+|.+.++.|+..
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~ 139 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYC 139 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEE
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEE
Confidence 5677787777655443 21 333 234455654 444432111123667788877776666555555543
No 244
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=27.71 E-value=3.4e+02 Score=24.44 Aligned_cols=173 Identities=11% Similarity=0.014 Sum_probs=82.7
Q ss_pred eeeEEEEEecCCCCEEEEEEcCC---eEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEEeC-C-eEEEEEc-C--CEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQ---TLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISFKG-K-EGWIVGK-P--AIL 185 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g---~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~~~-~-~~~~vG~-~--g~i 185 (334)
..+.+++|.| |.+.++.++..+ .|+. ..+.|+. ..+.... ..+..+.|.+ + .+++.+. . ..|
T Consensus 179 ~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~-------~~~~~~~~spdg~~la~~~~~~g~~~i 249 (415)
T 2hqs_A 179 QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAV-RQVASFP-------RHNGAPAFSPDGSKLAFALSKTGSLNL 249 (415)
T ss_dssp SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCS-------SCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCC-------CcccCEEEcCCCCEEEEEEecCCCceE
Confidence 4678899988 556655555442 4433 3344442 2222111 1356778875 3 3443442 2 235
Q ss_pred EEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCCEEE-EEcC-C--eEEE-ecCCCcceeeEecccc
Q 036387 186 LHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGGLWL-LVRG-G--GLFL-SKGTGITEEFEEVPVQ 260 (334)
Q Consensus 186 ~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~~~~-~~~~-g--~i~~-S~D~G~tW~w~~~~~~ 260 (334)
+.-+-.+...+.+... . ..+..+.|++++..++ .... + .|+. ..++|+. ..+...
T Consensus 250 ~~~d~~~~~~~~l~~~---~--------------~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~---~~l~~~ 309 (415)
T 2hqs_A 250 YVMDLASGQIRQVTDG---R--------------SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP---QRITWE 309 (415)
T ss_dssp EEEETTTCCEEECCCC---S--------------SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC---EECCCS
T ss_pred EEEECCCCCEEeCcCC---C--------------CcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE---EEEecC
Confidence 5433222223333211 0 0234567788887444 4432 2 4554 3344431 222211
Q ss_pred CCCeeeEEEEeecCCeEEEE-eCC---CcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE
Q 036387 261 SRGFGILDVGYRSQDEAWAA-GGS---GVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 261 ~~~~~~~~v~~~~~~~~~~~-G~~---G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~ 323 (334)
......+.|.+++..+++ ... ..|+. ..+.|+ .+.+.. . ..+.++.|.++++.++.
T Consensus 310 --~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~-~~~l~~--~--~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 310 --GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-VQVLSS--T--FLDETPSLAPNGTMVIY 370 (415)
T ss_dssp --SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-EEECCC--S--SSCEEEEECTTSSEEEE
T ss_pred --CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC-EEEecC--C--CCcCCeEEcCCCCEEEE
Confidence 124567788776654443 322 34543 344443 344433 1 26788888887775443
No 245
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=27.62 E-value=2.8e+02 Score=23.47 Aligned_cols=192 Identities=10% Similarity=0.130 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCEEEEEEc-CCeEEE-EcCCCcCeEeCcCCCCcc--cCcceeEEEEEEeC--CeEEEEE--cCCEEEEE
Q 036387 117 LLDIAFVPDDLNHGFLLGT-RQTLLE-TKDGGKTWAPRSIPSAEE--EDFNYRFNSISFKG--KEGWIVG--KPAILLHT 188 (334)
Q Consensus 117 l~~I~~~p~d~~~~~avG~-~g~i~~-S~DgG~TW~~~~~p~~~~--~~~~~~~~~I~~~~--~~~~~vG--~~g~i~~S 188 (334)
..++++.| |.+.+|++.. .+.|.. ..+.|+.-..+..+.... .....+...+.+++ +.+|+.+ ..+.|+.-
T Consensus 91 ~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 91 PFGATINN-TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCSEEEET-TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred cceEEECC-CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 56788887 5566777665 344433 233444333333321110 00012356788874 5566665 24545443
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEeecCC-EEEEEcCCeEEEe-cCCCcceeeEeccccC--CCe
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRADGG-LWLLVRGGGLFLS-KGTGITEEFEEVPVQS--RGF 264 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~~g~-~~~~~~~g~i~~S-~D~G~tW~w~~~~~~~--~~~ 264 (334)
+- ++.+.+..-. ..+. ....+.+.+++. +|+...++.++.- ...++. ........ ...
T Consensus 170 d~--~~~~~~~~~~-~~~~-------------~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~~~ 231 (353)
T 3vgz_A 170 DG--GNIKLKTAIQ-NTGK-------------MSTGLALDSEGKRLYTTNADGELITIDTADNKI--LSRKKLLDDGKEH 231 (353)
T ss_dssp ET--TTTEEEEEEC-CCCT-------------TCCCCEEETTTTEEEEECTTSEEEEEETTTTEE--EEEEECCCSSSCC
T ss_pred cC--CCCceEEEec-CCCC-------------ccceEEECCCCCEEEEEcCCCeEEEEECCCCeE--EEEEEcCCCCCCc
Confidence 31 2333332110 0111 012355667776 5555555665432 233331 11222211 112
Q ss_pred eeEEEEeecCC-eEEEEeCC-CcEEE-EcCCCcCcEEcccCCCcccceeEEEEeeCCe-EEEEe-CCeeEEEE
Q 036387 265 GILDVGYRSQD-EAWAAGGS-GVLLK-TTNGGKTWIREKAADNIAANLYSVKFINEKK-GFVLG-NDGVLLQY 332 (334)
Q Consensus 265 ~~~~v~~~~~~-~~~~~G~~-G~i~~-S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~-~~a~G-~~G~il~s 332 (334)
...++++.+++ .+|++... +.|+. ..+.|+.-+.+..+ . -..+.+.++++ +|++. .++.|...
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~----~-~~~~~~s~dg~~l~v~~~~~~~v~~~ 299 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAP----E-SLAVLFNPARNEAYVTHRQAGKVSVI 299 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECS----S-CCCEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC----C-CceEEECCCCCEEEEEECCCCeEEEE
Confidence 35567777654 46666543 55433 23334433333332 1 24577877665 77766 46666554
No 246
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=27.34 E-value=3.9e+02 Score=25.07 Aligned_cols=100 Identities=14% Similarity=0.112 Sum_probs=52.7
Q ss_pred eeeEeecCC--EEEEEcCCeEEEecCCCcc--eeeEeccc--cC-----CCeeeEEEEeecC----CeEEEEeC---C--
Q 036387 224 NMGWRADGG--LWLLVRGGGLFLSKGTGIT--EEFEEVPV--QS-----RGFGILDVGYRSQ----DEAWAAGG---S-- 283 (334)
Q Consensus 224 ~~~~~~~g~--~~~~~~~g~i~~S~D~G~t--W~w~~~~~--~~-----~~~~~~~v~~~~~----~~~~~~G~---~-- 283 (334)
.|.+.+++. +|++...|.|++-..+|.. -.+..++. .. ...++++|++.++ +.+|+.-. .
T Consensus 18 ~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~ 97 (463)
T 2wg3_C 18 GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERW 97 (463)
T ss_dssp EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSS
T ss_pred EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCc
Confidence 356677774 8888888888776544431 01222221 11 1246889998753 67887521 1
Q ss_pred --------CcEEEEcCC-C-------cCcEEcccC--CCcccceeEEEEeeCCeEEEE
Q 036387 284 --------GVLLKTTNG-G-------KTWIREKAA--DNIAANLYSVKFINEKKGFVL 323 (334)
Q Consensus 284 --------G~i~~S~Dg-G-------~tW~~~~~~--~~~~~~l~~i~~~~~~~~~a~ 323 (334)
..|.|-+.. + .+.+.+-.. ......-..|+|.+++.+|+.
T Consensus 98 ~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~ 155 (463)
T 2wg3_C 98 AIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYII 155 (463)
T ss_dssp CSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEE
T ss_pred ccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEE
Confidence 134333221 1 123333221 011233557888888888875
No 247
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=26.60 E-value=4.2e+02 Score=25.12 Aligned_cols=199 Identities=12% Similarity=0.051 Sum_probs=0.0
Q ss_pred eEEEEEecC-----CCCEEEEEEcCCe--EEEEcCCCcC---eEeCcCCCCcccCcceeEEEEEEeC-CeEEEEEcCC--
Q 036387 117 LLDIAFVPD-----DLNHGFLLGTRQT--LLETKDGGKT---WAPRSIPSAEEEDFNYRFNSISFKG-KEGWIVGKPA-- 183 (334)
Q Consensus 117 l~~I~~~p~-----d~~~~~avG~~g~--i~~S~DgG~T---W~~~~~p~~~~~~~~~~~~~I~~~~-~~~~~vG~~g-- 183 (334)
+.+|+|.|. +.+.+..++.+|. ||.-..+... ...+..|...-....-.+.++.|.+ +.+...+..|
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV 289 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFV 289 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEE
Q ss_pred EEEEEcCCCCCeEEeecCCCCCCCcccccccCccccceEeee--eEeecC-CEEEEEcCCeEEEecCCCcceeeEecccc
Q 036387 184 ILLHTSDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNM--GWRADG-GLWLLVRGGGLFLSKGTGITEEFEEVPVQ 260 (334)
Q Consensus 184 ~i~~S~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~--~~~~~g-~~~~~~~~g~i~~S~D~G~tW~w~~~~~~ 260 (334)
.|+-..++...-..+..-.. .|..+ .+.+++ .+++.+...+-.+--|--..-.-......
T Consensus 290 ~lWD~~~~~~~~~~~~~H~~-----------------~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 290 AEFDLTDPEVPSFYDQVHDS-----------------YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp EEEETTBCSSCSEEEECSSS-----------------CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred EEEECCCCCCceEEeecccc-----------------cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Q ss_pred CCCeeeEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEEe-CCeeEEEEc
Q 036387 261 SRGFGILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVLG-NDGVLLQYL 333 (334)
Q Consensus 261 ~~~~~~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G-~~G~il~s~ 333 (334)
.....+..++|.+++..++++......+--|-...-...... +-...+++|+|.+++..+++| .+|.+.-++
T Consensus 353 ~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee-cCCCceEEEEeCCCCCeEEEEECCCEEEEEe
No 248
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=25.57 E-value=2.2e+02 Score=27.67 Aligned_cols=58 Identities=9% Similarity=-0.019 Sum_probs=31.3
Q ss_pred eEEEEeecCCeEEEEeCCCcEEEEcCCCcCcEEcccCCCccc-----------------ceeEEEEeeCCeEEEEe
Q 036387 266 ILDVGYRSQDEAWAAGGSGVLLKTTNGGKTWIREKAADNIAA-----------------NLYSVKFINEKKGFVLG 324 (334)
Q Consensus 266 ~~~v~~~~~~~~~~~G~~G~i~~S~DgG~tW~~~~~~~~~~~-----------------~l~~i~~~~~~~~~a~G 324 (334)
+..+.|.++++.++.+.++.|+.-...+..-.++... +... ...+++|+++++.++.+
T Consensus 112 ~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~-~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~ 186 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFN-GRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYA 186 (719)
T ss_dssp BCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCC-CBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEE
T ss_pred cccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecC-CCcCCeEcccccceeeeecccCcccEEECCCCCEEEEE
Confidence 4566777777655555566665554333223443321 1111 12478999888776654
No 249
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=25.44 E-value=3.1e+02 Score=23.17 Aligned_cols=64 Identities=11% Similarity=0.035 Sum_probs=34.3
Q ss_pred eeeEEEEEecCCCCEEEEEEcCCeEEE-EcCCCcCeEeCcCCCCcccCcceeEEEEEE--eC-CeEEEE-EcCCEEEE
Q 036387 115 VVLLDIAFVPDDLNHGFLLGTRQTLLE-TKDGGKTWAPRSIPSAEEEDFNYRFNSISF--KG-KEGWIV-GKPAILLH 187 (334)
Q Consensus 115 ~~l~~I~~~p~d~~~~~avG~~g~i~~-S~DgG~TW~~~~~p~~~~~~~~~~~~~I~~--~~-~~~~~v-G~~g~i~~ 187 (334)
..+.++.|.| +.+.++.++.+|.|.. ..+.++.-..... ...+.++.+ .+ ...++. +..+.|..
T Consensus 87 ~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~v~~~~~~~~~~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 87 GPVLDVCWSD-DGSKVFTASCDKTAKMWDLSSNQAIQIAQH--------DAPVKTIHWIKAPNYSCVMTGSWDKTLKF 155 (368)
T ss_dssp SCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred CCEEEEEECc-CCCEEEEEcCCCcEEEEEcCCCCceeeccc--------cCceEEEEEEeCCCCCEEEEccCCCcEEE
Confidence 5789999987 5556666666775432 3343432221111 114778887 44 444444 44564443
No 250
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=24.33 E-value=68 Score=31.47 Aligned_cols=101 Identities=6% Similarity=0.058 Sum_probs=49.7
Q ss_pred eeEeecCCEEEEEcCCeEEE-ecCCCcceeeEeccccCC--CeeeEEEEeecCCeEEEEeC----------CCcEE-EEc
Q 036387 225 MGWRADGGLWLLVRGGGLFL-SKGTGITEEFEEVPVQSR--GFGILDVGYRSQDEAWAAGG----------SGVLL-KTT 290 (334)
Q Consensus 225 ~~~~~~g~~~~~~~~g~i~~-S~D~G~tW~w~~~~~~~~--~~~~~~v~~~~~~~~~~~G~----------~G~i~-~S~ 290 (334)
+.|.+++.++..+.++.|+. ..++|+. ..+..... ...+..++|.++++.++.+. ++.|+ ...
T Consensus 21 ~~~s~dg~~~~~~~d~~i~~~~~~~g~~---~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 21 PNWISGQEYLHQSADNNIVLYNIETGQS---YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CEESSSSEEEEECTTSCEEEEESSSCCE---EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred cEECCCCeEEEEcCCCCEEEEEcCCCcE---EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 45566775544445555543 3344542 22111000 01245677777766554432 24443 334
Q ss_pred CCCcCcEEcccCCCcccceeEEEEeeCCeEEEEeCCeeEEEE
Q 036387 291 NGGKTWIREKAADNIAANLYSVKFINEKKGFVLGNDGVLLQY 332 (334)
Q Consensus 291 DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~G~~G~il~s 332 (334)
++|+. +.. ......+..++|+++++.+|.+.++.|+..
T Consensus 98 ~~g~~---~~~-~~l~~~~~~~~~SPDG~~la~~~~~~i~~~ 135 (719)
T 1z68_A 98 SNGEF---VRG-NELPRPIQYLCWSPVGSKLAYVYQNNIYLK 135 (719)
T ss_dssp TTTEE---CCS-SCCCSSBCCEEECSSTTCEEEEETTEEEEE
T ss_pred CCCcc---ccc-eecCcccccceECCCCCEEEEEECCeEEEE
Confidence 55542 100 011235777888888887777666666543
No 251
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=23.98 E-value=5.3e+02 Score=25.46 Aligned_cols=191 Identities=7% Similarity=-0.014 Sum_probs=81.7
Q ss_pred eeEEEEEecCCCCEEEEEEc-CCeEEEE-cCCCc--CeEeCcCCCCcccCcceeEEEEEEe--CCeEEEEE-cCCEEEEE
Q 036387 116 VLLDIAFVPDDLNHGFLLGT-RQTLLET-KDGGK--TWAPRSIPSAEEEDFNYRFNSISFK--GKEGWIVG-KPAILLHT 188 (334)
Q Consensus 116 ~l~~I~~~p~d~~~~~avG~-~g~i~~S-~DgG~--TW~~~~~p~~~~~~~~~~~~~I~~~--~~~~~~vG-~~g~i~~S 188 (334)
...+|++.+ ..+.+|++-. .+.|++- .++.. +-......... .....|+++ .+++|+.- ..+.|++.
T Consensus 407 ~p~gla~d~-~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~-----~~P~glavD~~~g~LY~tD~~~~~I~v~ 480 (699)
T 1n7d_A 407 NVVALDTEV-ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI-----QAPDGLAVDWIHSNIYWTDSVLGTVSVA 480 (699)
T ss_dssp TCCCCEEET-TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC-------CCCEECCCSSSBCEECCTTTSCEEEE
T ss_pred ceEEEcccc-ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCC-----CCcceEEEEeeCCcEEEEeccCCeEEEE
Confidence 356778875 3467776643 3456553 34310 11111111100 012345665 35666653 33556666
Q ss_pred cCCCCCeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEEEEc--CCeEEEecCCCcceeeEeccccCCCee
Q 036387 189 SDAGESWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWLLVR--GGGLFLSKGTGITEEFEEVPVQSRGFG 265 (334)
Q Consensus 189 ~DgG~TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~~--~g~i~~S~D~G~tW~w~~~~~~~~~~~ 265 (334)
+-.|..-+.+... .+. .+ ..+++.+ .+.+|++.. .+.|++..-.|.. .+.+... ....
T Consensus 481 d~dg~~~~~l~~~-~~~------~P---------~giavDp~~g~ly~td~~~~~~I~~~~~dG~~--~~~l~~~-~l~~ 541 (699)
T 1n7d_A 481 DTKGVKRKTLFRE-QGS------KP---------RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYSLVTE-NIQW 541 (699)
T ss_dssp BSSSCCEEEECCC-SSC------CC---------CCEECCSSSSCCEECCCSSSCCEEBCCSSSCC--CCEESCS-SCSS
T ss_pred ecCCCceEEEEeC-CCC------Cc---------ceEEEccCCCcEEEcccCCCCeEEEEeCCCCC--eeEEEeC-CCCC
Confidence 5445443333211 010 01 1233444 345665542 2567765534432 1111101 0111
Q ss_pred eEEEEeec-CCeEEEEeC-CCcEEEEcCCCcCcEEcccCCCcccceeEEEEeeCCeEEEE-eCCeeEEEE
Q 036387 266 ILDVGYRS-QDEAWAAGG-SGVLLKTTNGGKTWIREKAADNIAANLYSVKFINEKKGFVL-GNDGVLLQY 332 (334)
Q Consensus 266 ~~~v~~~~-~~~~~~~G~-~G~i~~S~DgG~tW~~~~~~~~~~~~l~~i~~~~~~~~~a~-G~~G~il~s 332 (334)
..+|++.+ .+.+|++-. .+.|++..=.|..-+.+........+-.+|++.. +++|.+ ...+.|.+.
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~-~~lywtd~~~~~V~~~ 610 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSA 610 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEET-TEEEEECSTTTCEEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEEC-CEEEEEeCCCCeEEEE
Confidence 23566653 467777643 3556554433444444332111113445666643 456655 344556554
No 252
>2a9d_A Sulfite oxidase; molybdopterin, molybdenum, oxidoreductase; HET: MTE; 1.70A {Gallus gallus} SCOP: b.1.18.6 d.176.1.1 PDB: 2a9a_A* 2a99_A* 2a9b_A* 2a9c_A*
Probab=23.22 E-value=51 Score=30.57 Aligned_cols=17 Identities=29% Similarity=0.589 Sum_probs=14.3
Q ss_pred EEEEcCCCcCeEeCcCC
Q 036387 139 LLETKDGGKTWAPRSIP 155 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~p 155 (334)
+-.|.|+|+||+...+.
T Consensus 288 VEVS~DgG~tW~~A~l~ 304 (372)
T 2a9d_A 288 VDVSLDGGRTWKVARLM 304 (372)
T ss_dssp EEEESBSSSSCEECEEC
T ss_pred EEEEcCCCCcceEeEcC
Confidence 66699999999988754
No 253
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=22.83 E-value=2.1e+02 Score=27.71 Aligned_cols=58 Identities=7% Similarity=0.011 Sum_probs=29.7
Q ss_pred eEEEEeecCCeEEEEeCCCcEEEEc-CCCcCcEEcccCCCcc----------------cceeEEEEeeCCeEEEEe
Q 036387 266 ILDVGYRSQDEAWAAGGSGVLLKTT-NGGKTWIREKAADNIA----------------ANLYSVKFINEKKGFVLG 324 (334)
Q Consensus 266 ~~~v~~~~~~~~~~~G~~G~i~~S~-DgG~tW~~~~~~~~~~----------------~~l~~i~~~~~~~~~a~G 324 (334)
+..+.|.++++.++.+..+.|+.-. ++|+ -.++....... ....++.|+++++.++.+
T Consensus 116 ~~~~~~SPdG~~la~~~~~~i~~~~~~~g~-~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~ 190 (723)
T 1xfd_A 116 LQYAGWGPKGQQLIFIFENNIYYCAHVGKQ-AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYA 190 (723)
T ss_dssp CSBCCBCSSTTCEEEEETTEEEEESSSSSC-CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEE
T ss_pred ccccEECCCCCEEEEEECCeEEEEECCCCc-eEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEE
Confidence 3455666666555544446665543 4444 33333210000 123678999888766554
No 254
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.14 E-value=4.4e+02 Score=23.82 Aligned_cols=197 Identities=12% Similarity=0.050 Sum_probs=93.9
Q ss_pred EEEecCCCCEEEEEEcCC--eEEE-EcCCCcCeEeCc-CCCCcccCcceeEEEEEEeC--CeEEEEEcCCEEEEEcCCCC
Q 036387 120 IAFVPDDLNHGFLLGTRQ--TLLE-TKDGGKTWAPRS-IPSAEEEDFNYRFNSISFKG--KEGWIVGKPAILLHTSDAGE 193 (334)
Q Consensus 120 I~~~p~d~~~~~avG~~g--~i~~-S~DgG~TW~~~~-~p~~~~~~~~~~~~~I~~~~--~~~~~vG~~g~i~~S~DgG~ 193 (334)
+++.+ +.+.+|++...+ .|++ ..+++.....+. .+.... .....|++++ +.+|+....+.|++-+-.+.
T Consensus 176 ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~----~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~ 250 (409)
T 3hrp_A 176 PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFS----GKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ 250 (409)
T ss_dssp CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSC----SCCCBCEECTTSSEEEEECTTCEEEEEETTTC
T ss_pred eeEec-CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhc----CCcEEEEEeCCCCeEEEEECCCcEEEEECCCC
Confidence 77776 455667665433 4443 334343322321 001000 1245667764 56777555566776543333
Q ss_pred CeEEeecCCCCCCCcccccccCccccceEeeeeEee-cCCEEEEEc-CCeEEEecCCCcceeeEecc-ccC---------
Q 036387 194 SWERIPLSSQLPGDMAFWQPHNRAVARRIQNMGWRA-DGGLWLLVR-GGGLFLSKGTGITEEFEEVP-VQS--------- 261 (334)
Q Consensus 194 TW~~~~~~~~l~g~~~~~~~~~~~~~~~i~~~~~~~-~g~~~~~~~-~g~i~~S~D~G~tW~w~~~~-~~~--------- 261 (334)
.-+.+.... ..+. ..+.|. ..+.+.+ ++.+|++.. .+.|++-.-.|..-.+.... ...
T Consensus 251 ~~~~~~~~~-~~g~-~~~~P~--------~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~ 320 (409)
T 3hrp_A 251 EVTLIKQLE-LSGS-LGTNPG--------PYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEA 320 (409)
T ss_dssp CEEEEEECC-CCSC-CCCSSC--------CEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGC
T ss_pred CEEEEeccc-ccCC-CCCCcc--------ccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCccccc
Confidence 434332110 1111 011110 1356677 467888764 45676654444310111000 000
Q ss_pred CCeeeEEEEeecCCeEEEEeC--CCcEEEEc-CCCcCcEEcccC-------CC-----cccceeEEEEeeCCeEEEEe-C
Q 036387 262 RGFGILDVGYRSQDEAWAAGG--SGVLLKTT-NGGKTWIREKAA-------DN-----IAANLYSVKFINEKKGFVLG-N 325 (334)
Q Consensus 262 ~~~~~~~v~~~~~~~~~~~G~--~G~i~~S~-DgG~tW~~~~~~-------~~-----~~~~l~~i~~~~~~~~~a~G-~ 325 (334)
......++++.+++.+|++.. ...|.+-. ..|+ -..+... ++ .-....+|++.+++++|++. .
T Consensus 321 ~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~ 399 (409)
T 3hrp_A 321 LFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAW 399 (409)
T ss_dssp BCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEEST
T ss_pred EeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECC
Confidence 011246788877788888754 34554443 3443 2222110 00 01346789998889999885 4
Q ss_pred CeeEEEE
Q 036387 326 DGVLLQY 332 (334)
Q Consensus 326 ~G~il~s 332 (334)
+..|.|.
T Consensus 400 n~~Ir~i 406 (409)
T 3hrp_A 400 GKAIRKY 406 (409)
T ss_dssp TCEEEEE
T ss_pred CCeEEEE
Confidence 4556554
No 255
>1ogp_A Sulfite oxidase; oxidoreductase, molybdenum cofactor, molybdopterin, peroxisomes, intramolecular electron transfer, oxidoreductas; HET: MTQ; 2.60A {Arabidopsis thaliana} SCOP: b.1.18.6 d.176.1.1
Probab=21.17 E-value=61 Score=30.25 Aligned_cols=26 Identities=27% Similarity=0.502 Sum_probs=0.0
Q ss_pred EEEEEEcCCe----EEEEcCCCcCeEeCcC
Q 036387 129 HGFLLGTRQT----LLETKDGGKTWAPRSI 154 (334)
Q Consensus 129 ~~~avG~~g~----i~~S~DgG~TW~~~~~ 154 (334)
.+||.+..|. +-.|.|||+||+...+
T Consensus 287 ~G~A~sGgg~~I~rVEVS~DgG~tW~~A~l 316 (393)
T 1ogp_A 287 KGYAVSGGGRGIERVDISLDGGKNWVEASR 316 (393)
T ss_dssp EEEEECSTTCCEEEEEEESSTTSSCEECEE
T ss_pred EEEEEcCCCCCEEEEEEEcCCCCCceEeec
No 256
>2xts_A Sulfite dehydrogenase; oxidoreductase-electron transport complex, SOX system, sulfa oxidation, molybdenum cofactor, heme, electron transfer; HET: MTE HEC; 1.33A {Paracoccus pantotrophus}
Probab=21.16 E-value=61 Score=30.28 Aligned_cols=16 Identities=38% Similarity=0.729 Sum_probs=14.1
Q ss_pred EEEEcCCCcCeEeCcC
Q 036387 139 LLETKDGGKTWAPRSI 154 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~ 154 (334)
+..|.|+|+||+...+
T Consensus 300 VevS~DgG~tW~~A~L 315 (390)
T 2xts_A 300 VDVSLDGGKNWTTARI 315 (390)
T ss_dssp EEEESBTTSSCEECEE
T ss_pred EEEecCCCCcEEEeec
Confidence 7789999999998765
No 257
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=20.90 E-value=4.4e+02 Score=23.36 Aligned_cols=62 Identities=13% Similarity=0.020 Sum_probs=31.5
Q ss_pred cccccceeEEEecCCCccceEEecCCCCCcEEcccCCCCCeeeEEEEEecCCCCEEEEEEcCCeE
Q 036387 75 TATLSLSISLAATTGLYEQPAKSEEALSAWERVYIPVDPGVVLLDIAFVPDDLNHGFLLGTRQTL 139 (334)
Q Consensus 75 ~~~~a~g~~~~~g~~~~g~i~~S~DgG~tW~~~~~p~~~~~~l~~I~~~p~d~~~~~avG~~g~i 139 (334)
.-.|..+.++|+|-+.--.|| ..+.|+-=+.+... .....+.+|+|.| |.+.+...+.+|.|
T Consensus 110 ~l~wS~~n~lAvgld~tV~lW-d~~tg~~~~~~~~~-~~~~~V~sv~fsp-dg~~lasgs~Dg~v 171 (420)
T 4gga_A 110 LVDWSSGNVLAVALDNSVYLW-SASSGDILQLLQME-QPGEYISSVAWIK-EGNYLAVGTSSAEV 171 (420)
T ss_dssp CEEECTTSEEEEEETTEEEEE-ETTTCCEEEEEECC-STTCCEEEEEECT-TSSEEEEEETTSCE
T ss_pred eEEECCCCEEEEEeCCEEEEE-ECCCCCEEEEEEec-CCCCcEEEEEECC-CCCEEEEEECCCeE
Confidence 334555556666654112333 33344433332221 2235799999997 44554444556654
No 258
>3taw_A Hypothetical glycoside hydrolase; 5-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides distasonis} PDB: 3r67_A*
Probab=20.88 E-value=4.6e+02 Score=23.57 Aligned_cols=14 Identities=29% Similarity=0.432 Sum_probs=10.3
Q ss_pred EEEEcCCCCCeEEee
Q 036387 185 LLHTSDAGESWERIP 199 (334)
Q Consensus 185 i~~S~DgG~TW~~~~ 199 (334)
+.+|+| |.+|++..
T Consensus 85 ~A~S~D-gi~w~~~~ 98 (356)
T 3taw_A 85 YATSTD-GIHFERDT 98 (356)
T ss_dssp CEEESS-SSSCEECS
T ss_pred EEEeCC-CccceECC
Confidence 557888 56899864
No 259
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=20.38 E-value=2.5e+02 Score=26.44 Aligned_cols=96 Identities=13% Similarity=0.036 Sum_probs=48.5
Q ss_pred eeEeecCCEEEEE-cC----CeEEEec-CCCcceeeEeccccCCCeeeEEEEeecCCeEEEEe-CCC--cEEEEc-CCCc
Q 036387 225 MGWRADGGLWLLV-RG----GGLFLSK-GTGITEEFEEVPVQSRGFGILDVGYRSQDEAWAAG-GSG--VLLKTT-NGGK 294 (334)
Q Consensus 225 ~~~~~~g~~~~~~-~~----g~i~~S~-D~G~tW~w~~~~~~~~~~~~~~v~~~~~~~~~~~G-~~G--~i~~S~-DgG~ 294 (334)
+.+++||..++.. .+ ..|++-. ++|+ .+.+... ......++|.++++.++.+ .+| .|++-. ++|+
T Consensus 155 ~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---~~~l~~~--~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 155 FVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---LRVFDSG--EGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS 229 (582)
T ss_dssp EEEEEETTEEEEEEEEETTEEEEEEEETTTCC---CEEECCS--SCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC
T ss_pred EEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---ceEeecC--CCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc
Confidence 4567888866533 22 3455443 4454 2333211 1245778888777655543 345 565443 4443
Q ss_pred CcEEcccCCCcccceeEEE--------EeeCCeEEEEe-CCeeE
Q 036387 295 TWIREKAADNIAANLYSVK--------FINEKKGFVLG-NDGVL 329 (334)
Q Consensus 295 tW~~~~~~~~~~~~l~~i~--------~~~~~~~~a~G-~~G~i 329 (334)
.+.+.. ....+..+. +++++++++++ .+|.+
T Consensus 230 -~~~~~~---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 230 -VEDLEL---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp -EEECCC---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred -EEEccC---CCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 442222 122333344 77777776654 45544
No 260
>1sox_A Sulfite oxidase; oxidoreductase, sulfite oxidation; HET: MTE HEM EPE; 1.90A {Gallus gallus} SCOP: b.1.18.6 d.120.1.1 d.176.1.1 PDB: 3hc2_A* 3hbq_A* 3hbg_A* 3hbp_A* 3r18_A* 3r19_A*
Probab=20.24 E-value=63 Score=30.91 Aligned_cols=17 Identities=29% Similarity=0.589 Sum_probs=14.3
Q ss_pred EEEEcCCCcCeEeCcCC
Q 036387 139 LLETKDGGKTWAPRSIP 155 (334)
Q Consensus 139 i~~S~DgG~TW~~~~~p 155 (334)
+-.|.|||+||+...+.
T Consensus 382 VEVS~DgG~tW~~A~l~ 398 (466)
T 1sox_A 382 VDVSLDGGRTWKVARLM 398 (466)
T ss_dssp EEEESBTTSSCEECEEC
T ss_pred EEEEcCCCCcceEeecC
Confidence 66699999999988754
Done!