BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036389
(198 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 26/194 (13%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S PK + ++KCND +R+ VR+ L AL KV+ EA D+++ D+V AC+PI+VA+S+ES
Sbjct: 183 SNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEA--DEDIKDEVNACDPIRVAVSVES 240
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M+EK GRS+ T KFKYR ++FN DP N + R+KVLLG+VKP+ ++NM+ +EMAS++ Q
Sbjct: 241 VMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQ 300
Query: 127 LWYENSR-KGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------P 172
ENS+ K +A E G P KC RCG ++ ++ P
Sbjct: 301 --RENSQIKEKALFDCERGG--------PPKATTDQFKCGRCGQRKTTYYQLQTRSADEP 350
Query: 173 LRRHITCLNCYQYW 186
+ +TC+NC +W
Sbjct: 351 MTTFVTCVNCNNHW 364
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 120/194 (61%), Gaps = 26/194 (13%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S PK + ++KCND +R+ VR+ L AL KV+ EA D+++ D+V AC+PI+VA+S+ES
Sbjct: 138 SNGPPKLTAMIKCNDALRDKVRELLAEALFKVASEA--DEDIKDEVNACDPIRVAVSVES 195
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M+EK GRS+ T KFKYR ++FN DP N + R+KVLLG+VKP+ ++NM+ +EMAS++ Q
Sbjct: 196 VMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQ 255
Query: 127 LWYENSR-KGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------P 172
ENS+ K +A E G P KC RCG ++ ++ P
Sbjct: 256 --RENSQIKEKALFDCERGG--------PPKATTDQFKCGRCGQRKTTYYQLQTRSADEP 305
Query: 173 LRRHITCLNCYQYW 186
+ +TC+NC +W
Sbjct: 306 MTTFVTCVNCNNHW 319
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 115/193 (59%), Gaps = 24/193 (12%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S PK + +VKCND +R+ +R+ L ALSKV EA D D++ C+PI+VA+S+ES
Sbjct: 158 SVTPPKLTAIVKCNDALRDKIRELLVEALSKVVSEANEDGR--DEISKCDPIRVAVSVES 215
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
AM+EK GRS+ KFKYR ++FN DP N + R+KVLLG+VKPE +++MT +EMAS + Q
Sbjct: 216 AMFEKMGRSNGAQKFKYRSIMFNLKDPNNPDLRRKVLLGEVKPERLISMTPEEMASKERQ 275
Query: 127 LWYENSRKGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PL 173
N K +A E G P KCSRCG ++ ++ P+
Sbjct: 276 EEI-NQIKEKALFDCERGG--------PAKATTDQFKCSRCGQRKCTYYQMQTRSADEPM 326
Query: 174 RRHITCLNCYQYW 186
++TC+NC ++W
Sbjct: 327 TTYVTCVNCNKHW 339
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 115/197 (58%), Gaps = 34/197 (17%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T PK +VKCND +R+ +R+ L ALSKV+ EA D+++ D+V+AC+PI+VA+S+ESA
Sbjct: 151 TGPPKLKTLVKCNDALRDKIRELLAEALSKVASEA--DEDIRDEVEACDPIRVAVSVESA 208
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD---- 123
M+EK GRS+ K KYR ++FN D N + R+KVLLG V+P+ +V M +EMAS+
Sbjct: 209 MFEKLGRSNGAQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKR 268
Query: 124 -----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------- 171
K + ++ R G+AE F KC RCG ++ ++
Sbjct: 269 ENNQIKEKALFDCERGGKAEATTDQF--------------KCGRCGQRKCTYYQMQTRSA 314
Query: 172 --PLRRHITCLNCYQYW 186
P+ ++TC+NC +W
Sbjct: 315 DEPMTTYVTCVNCNNHW 331
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 115/194 (59%), Gaps = 34/194 (17%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK +VKCND +R+ +R+ L ALSKV+ EA D+++ D+V+AC+PI+VA+S+ES M+E
Sbjct: 172 PKLKTLVKCNDALRDKIRELLAEALSKVASEA--DEDIRDEVEACDPIRVAVSVESMMFE 229
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD------- 123
K GRS+ K KYR ++FN D N +FR+KVLLG+V+PE +V M +EMAS+
Sbjct: 230 KLGRSNGAQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENN 289
Query: 124 --KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------P 172
K ++ ++ R G+A+ F KC RC ++ ++ P
Sbjct: 290 QIKEKVLFDCERSGQAQATTDQF--------------KCGRCRQRKCTYYQMQTRSADEP 335
Query: 173 LRRHITCLNCYQYW 186
+ ++TC+NC +W
Sbjct: 336 MTTYVTCVNCNNHW 349
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 26/190 (13%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + ++K D R+ +R+ L+ A SKV EA D+ +D+V A +PI+VA+S+ES M+E
Sbjct: 189 PKLTSMIKSKDAARDKIRELLFEAFSKVPGEA--DEEFMDEVNASDPIRVAVSVESVMFE 246
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
WG S+ K KYR ++FN DPKN +FR+KVLLG +KPE ++NM+ +MASD Q E
Sbjct: 247 NWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASD--QRKRE 304
Query: 131 NSRKGRA-----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRH 176
N + E G +PK KC RCG ++ ++ P+
Sbjct: 305 NEEIAQKALFDCERGG-------APKATTDQF-KCGRCGQRKTTYYQLQTRSADEPMTTF 356
Query: 177 ITCLNCYQYW 186
+TC+NC +W
Sbjct: 357 VTCVNCNNHW 366
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 108/190 (56%), Gaps = 26/190 (13%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + ++K D R+ +R+ L+ A SKV EA D+ +D+V A +PI+VA+S+ES M+E
Sbjct: 110 PKLTSMIKSKDAARDKIRELLFEAFSKVPGEA--DEEFMDEVNASDPIRVAVSVESVMFE 167
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
WG S+ K KYR ++FN DPKN +FR+KVLLG +KPE ++NM+ +MASD Q E
Sbjct: 168 NWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMINMSTADMASD--QRKRE 225
Query: 131 NSRKGRA-----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRH 176
N + E G +PK KC RCG ++ ++ P+
Sbjct: 226 NEEIAQKALFDCERGG-------APKATTDQF-KCGRCGQRKTTYYQLQTRSADEPMTTF 277
Query: 177 ITCLNCYQYW 186
+TC+NC +W
Sbjct: 278 VTCVNCNNHW 287
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 118/192 (61%), Gaps = 22/192 (11%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S PK + ++KCND +R+ +R+ +Y A SKV + A +N++ ++ AC+P++VA+++E+
Sbjct: 144 SNGPPKLTSMIKCNDAVRDKIREIIYEAFSKV-VNEAEGENMV-RINACDPVRVAVTVET 201
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M+EK GRS+ K KYR ++FN D N + R++VLLG++KPE ++ MTA+EMASD+ +
Sbjct: 202 LMFEKLGRSNGAQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAEEMASDQRK 261
Query: 127 LWYENSR-KGRAETNGRIF--SGLVSPKNIVYGICKCSRCGHKRMSFI---------PLR 174
L EN + K +A +F + PK KC +CG ++ ++ P+
Sbjct: 262 L--ENKQIKDKA-----LFECERGIKPKATTDQF-KCGKCGQRKCTYYQLQTRSADEPMT 313
Query: 175 RHITCLNCYQYW 186
+TC+NC +W
Sbjct: 314 TFVTCVNCNNHW 325
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 107/186 (57%), Gaps = 18/186 (9%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK ++K ND R+ +R+ L+ ALSKV+ EA D++++D V +PI+VA+++ES ++E
Sbjct: 188 PKLKTMIKSNDATRDKIREILHEALSKVTGEA--DEDLVDVVNNSDPIRVAVTVESVLFE 245
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
KWG S+ K KYR L+FN D N +FR+KVLLG ++PE ++NM+ EMAS++ + Y+
Sbjct: 246 KWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRKQEYQ 305
Query: 131 NSRKGRAETNGRIFS-GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCL 180
T +F P KC RCG ++ ++ P+ H+TC+
Sbjct: 306 KI------TEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTHVTCV 359
Query: 181 NCYQYW 186
C W
Sbjct: 360 VCNNRW 365
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 114/193 (59%), Gaps = 24/193 (12%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S PK + ++KCND +R+ R+ LY A SKV EA + + +V AC+P+++A+S+E+
Sbjct: 147 SNGPPKLTSMIKCNDALRDKFREILYEAFSKVVNEAEGED--LARVNACDPVRIAVSVET 204
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M+EK GRS+ KFKYR ++FN D N + R++VLLG +KPE ++ MTA+EMASD +
Sbjct: 205 VMFEKLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMASDNRK 264
Query: 127 LWYENSR-KGRAETNGRIFS---GLVSPKNIVYGICKCSRCGHK---------RMSFIPL 173
L EN + K +A +F G+ PK KC +CG + R + P+
Sbjct: 265 L--ENKQIKDKA-----LFECERGM-KPKATTDQF-KCGKCGQRMCTYYQLQTRSADEPM 315
Query: 174 RRHITCLNCYQYW 186
+TC+NC +W
Sbjct: 316 TTFVTCVNCNNHW 328
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 111/202 (54%), Gaps = 37/202 (18%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAI 62
+ PK + +VKCND R+ +R+ L A +KVS E ++D +N++D+V AC+P +VA+
Sbjct: 178 SGAPKLTSLVKCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYRVAV 237
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+ESA++E+ GRS+ +K KYR ++FN N +FR++VL+G+V PE + +++ EMAS
Sbjct: 238 KVESALFERLGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDEMAS 297
Query: 123 D---------KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-- 171
D K + +E R G + F KC RCG ++ ++
Sbjct: 298 DARKQENMQIKEKALFECERAGAPKATTDQF--------------KCGRCGQRKTTYYQL 343
Query: 172 -------PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 344 QTRSADEPMTTFVTCVNCNNHW 365
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 20/187 (10%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P+ + KCND R+ +R+ LY AL KVS EA ++ + +V AC+ I VA+++ESA++
Sbjct: 150 PRMKSIPKCNDPSRDNIREQLYEALCKVSSEA--NEEIQKEVNACDAIGVAVAVESALFS 207
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
WG S+ + + KYR L+FN D KN +FR+KVLLG VKPE I ++++EMASD+
Sbjct: 208 NWGPSNGSDRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSEEMASDER----- 262
Query: 131 NSRKGRAETNGR--IFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITC 179
RK E + + L KC RCG ++ S+ P+ ++TC
Sbjct: 263 --RKKNKEIKEKALLVCQLAGAPKATTDQFKCGRCGQRKTSYYQMQTRSADEPMTTYVTC 320
Query: 180 LNCYQYW 186
+NC W
Sbjct: 321 VNCSNRW 327
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 126 bits (317), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 18/186 (9%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK ++K ND R+ +R+ L+ ALSKV+ EA D++++D V +PI+VA+++ES ++E
Sbjct: 188 PKLKTMIKSNDATRDKIREILHEALSKVTGEA--DEDLVDVVNNSDPIRVAVTVESVLFE 245
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
KWG S+ K KYR L+FN D N +FR+KVLLG ++PE ++NM+ EMAS++ + Y+
Sbjct: 246 KWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRKQEYQ 305
Query: 131 NSRKGRAETNGRIFS-GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCL 180
T +F P KC RCG ++ ++ P+ ++TC+
Sbjct: 306 KI------TEKALFECERGGPPKATTDQFKCGRCGQRKTTYYQMQTRSADEPMTTYVTCV 359
Query: 181 NCYQYW 186
C W
Sbjct: 360 VCNNRW 365
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 126 bits (317), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 111/188 (59%), Gaps = 22/188 (11%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK ++K ND R+ +R+ L AL+KV EA D++++D+V AC+PI+VA+++ES ++E
Sbjct: 189 PKLKTMIKSNDSARDKIRELLRDALAKVFEEA--DEDMMDEVNACDPIRVAVTVESVLFE 246
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
WG S+ K KYR L+FN D KN +FR+KVLLG V+P+ + M++ EMAS+ Q E
Sbjct: 247 NWGPSNGAQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASE--QRKQE 304
Query: 131 NSRKGRAETNGRIFS---GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHIT 178
N + + +F GL PK KC RCG ++ ++ P+ ++T
Sbjct: 305 NEKIEQKA----LFDCERGL-QPKATTDQF-KCGRCGQRKTTYYQMQTRSADEPMTTYVT 358
Query: 179 CLNCYQYW 186
C+NC W
Sbjct: 359 CVNCNNRW 366
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 113/199 (56%), Gaps = 33/199 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A +KV E ++D +N++D+V AC+P +VA+++E
Sbjct: 180 PKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVE 239
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E++GRS+ +K KYR ++FN N +FR++VL+G V PE + +++ EMASD
Sbjct: 240 SALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD-- 297
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC RCG ++ ++
Sbjct: 298 ---------ARKQENLQIKEKALFDCERGAAPKATTDQF-KCGRCGQRKTTYYQLQTRSA 347
Query: 172 --PLRRHITCLNCYQYWAS 188
P+ +TC+NC +W+S
Sbjct: 348 DEPMTTFVTCVNCNNHWSS 366
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 125 bits (315), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 115/195 (58%), Gaps = 29/195 (14%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A S+V E + D +N++D+V A +P +VA+++E
Sbjct: 180 PKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVE 239
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ GRS+ +K KYR ++FN N +FR++VLLG V+PE +V+++ +EMASD
Sbjct: 240 SALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDAR 299
Query: 126 QLWYENSR-KGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--------- 171
+L EN + K +A E G +PK KC RCG ++ ++
Sbjct: 300 KL--ENKQIKEKALFDCERGG-------APKATTDQF-KCGRCGQRKTTYYQLQTRSADE 349
Query: 172 PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 350 PMTTFVTCVNCNNHW 364
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/195 (36%), Positives = 115/195 (58%), Gaps = 29/195 (14%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A S+V E + D +N++D+V A +P +VA+++E
Sbjct: 128 PKLTSLVKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVE 187
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ GRS+ +K KYR ++FN N +FR++VLLG V+PE +V+++ +EMASD
Sbjct: 188 SALFERLGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDAR 247
Query: 126 QLWYENSR-KGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--------- 171
+L EN + K +A E G +PK KC RCG ++ ++
Sbjct: 248 KL--ENKQIKEKALFDCERGG-------APKATTDQF-KCGRCGQRKTTYYQLQTRSADE 297
Query: 172 PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 298 PMTTFVTCVNCNNHW 312
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A +KV E ++D +N++D+V AC+P +VA+++E
Sbjct: 180 PKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVE 239
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E++GRS+ +K KYR ++FN N +FR++VL+G V PE + +++ EMASD
Sbjct: 240 SALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD-- 297
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC RCG ++ ++
Sbjct: 298 ---------ARKQENLQIKEKALFDCERGAAPKATTDQF-KCGRCGQRKTTYYQLQTRSA 347
Query: 172 --PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 348 DEPMTTFVTCVNCNNHW 364
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 111/197 (56%), Gaps = 33/197 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A +KV E ++D +N++D+V AC+P +VA+++E
Sbjct: 131 PKLTSLVKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVE 190
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E++GRS+ +K KYR ++FN N +FR++VL+G V PE + +++ EMASD
Sbjct: 191 SALFERFGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASD-- 248
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC RCG ++ ++
Sbjct: 249 ---------ARKQENLQIKEKALFDCERGAAPKATTDQF-KCGRCGQRKTTYYQLQTRSA 298
Query: 172 --PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 299 DEPMTTFVTCVNCNNHW 315
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 105/185 (56%), Gaps = 21/185 (11%)
Query: 12 KASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEK 71
KA+ + K ++ +RE +R+ + ALS V EA HD +K C+PIQ+A S+ESA++ K
Sbjct: 161 KAASIPKSSNSLRESIREQISQALSMVFNEAKHDT-----LKTCDPIQIAASLESALFVK 215
Query: 72 WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN 131
WG S+ + KYR LLFN DPKN +FR+K+L+G++K E + M A +MASD+MQ
Sbjct: 216 WGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKAEEVAEMDAGQMASDEMQ----- 270
Query: 132 SRKGRAETNGRIFSGLVS-PKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
RK + ++ +V + KC +CG KR ++ P+ ++TC
Sbjct: 271 -RKNQGIQAKSLWKCIVGREQEGTTDQFKCGKCGEKRTTYYQMQTRSADEPMTTYVTCTI 329
Query: 182 CYQYW 186
C +W
Sbjct: 330 CDNHW 334
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 108/198 (54%), Gaps = 34/198 (17%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
ST PK ++K ND R+ +R+ L+ ALSKV+ EA D++++ V +PI+VA+++ES
Sbjct: 183 STAPPKLKTMIKSNDATRDKIREILHEALSKVTREA--DEDLVAVVNDSDPIRVAVTVES 240
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++EKWG S+ K KYR L+FN D N +FR+KVLLG V+PE ++NM+ EMAS++ +
Sbjct: 241 VLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRK 300
Query: 127 LWYEN---------SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
Y+ R G+ + F KC RCG ++ ++
Sbjct: 301 QEYQKITEKALFECERGGQPKATTDQF--------------KCGRCGQRKTTYYQMQTRS 346
Query: 172 ---PLRRHITCLNCYQYW 186
P+ ++TC C W
Sbjct: 347 ADEPMTTYVTCCVCNNRW 364
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 29/195 (14%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
P+ + +V+CND R+ R+ L A KVS E + D +N++D+V AC+P +V++++E
Sbjct: 177 PRLTSLVRCNDAARDKYRELLAEAFFKVSKETSKDDREEVRNLLDEVNACDPYRVSVTVE 236
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ GRS+ +K KYR +LFN N +FR++VLLG+V+P +V+++ EMASD
Sbjct: 237 SALFERLGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLVDISPDEMASDAR 296
Query: 126 QLWYENSR-KGRA----ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--------- 171
+L EN + K +A E G +PK KC RCG ++ ++
Sbjct: 297 KL--ENKQIKEKALFDCERAG-------APKATTDQF-KCGRCGQRKTTYYQLQTRSADE 346
Query: 172 PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 347 PMTTFVTCVNCNNHW 361
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 30/192 (15%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + ++KCND +R+ +R+ L ALS+V E+ D+ ++V C+P +VA+S+ES M+E
Sbjct: 201 PKLTSMLKCNDPVRDKIREMLVEALSRVHGES--DEYDREKVNGCDPFRVAVSVESHMFE 258
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
K GRS+ K KYR ++FN D N + R++VL G+V PE ++ ++A+EMASDK
Sbjct: 259 KLGRSTGAEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKLITLSAEEMASDK------ 312
Query: 131 NSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI---------PLR 174
R + N +I + +PK KC RCG ++ ++ P+
Sbjct: 313 -----RKQENNQIKEKFLFNCEQGPAPKASTDQF-KCGRCGQRKCTYYQMQTRSADEPMT 366
Query: 175 RHITCLNCYQYW 186
++TC+NC +W
Sbjct: 367 TYVTCVNCNNHW 378
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 37/199 (18%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
P+ + VVKC D R+ +R L A S+VS E D +N+I++VKAC+P ++A+ +E
Sbjct: 186 PRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVE 245
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
A+++K G + K +YR L+FN D N +FR++VLLG V+PE I ++T EMASD
Sbjct: 246 CALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTR 305
Query: 126 QL---------WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+L +E R G + F KC RCG ++ ++
Sbjct: 306 KLENKKIEEKALFECERGGAPKATTDQF--------------KCGRCGQRKTTYYQLQTR 351
Query: 172 ----PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 352 SADEPMTTFVTCVNCNNHW 370
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 104/199 (52%), Gaps = 37/199 (18%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
P+ + VVKC D R+ +R L A S+VS E D +N+I++VKAC+P ++A+ +E
Sbjct: 192 PRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVE 251
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
A+++K G + K +YR L+FN D N +FR++VLLG V+PE I ++T EMASD
Sbjct: 252 CALFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTR 311
Query: 126 QL---------WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+L +E R G + F KC RCG ++ ++
Sbjct: 312 KLENKKIEEKALFECERGGAPKATTDQF--------------KCGRCGQRKTTYYQLQTR 357
Query: 172 ----PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 358 SADEPMTTFVTCVNCNNHW 376
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 119 bits (298), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 109/197 (55%), Gaps = 33/197 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A VS E + D KN++D+V+AC+P +VA+++E
Sbjct: 59 PKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVE 118
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ G S+ T++ KYR ++FN N +FR++VL+G V PE + ++ EMASD
Sbjct: 119 SALFERLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD-- 176
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC+RCG ++ ++
Sbjct: 177 ---------ARKQENMQIKEKALFDCERGAAPKATTDQF-KCARCGQRKTTYYQLQTRSA 226
Query: 172 --PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 227 DEPMTTFVTCVNCNNHW 243
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 109/197 (55%), Gaps = 33/197 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A VS E + D KN++D+V+AC+P +VA+++E
Sbjct: 181 PKLTSLVKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVE 240
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ G S+ T++ KYR ++FN N +FR++VL+G V PE + ++ EMASD
Sbjct: 241 SALFERLGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASD-- 298
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC+RCG ++ ++
Sbjct: 299 ---------ARKQENMQIKEKALFDCERGAAPKATTDQF-KCARCGQRKTTYYQLQTRSA 348
Query: 172 --PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 349 DEPMTTFVTCVNCNNHW 365
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 103/199 (51%), Gaps = 37/199 (18%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
P+ + VVKC D R+ +R L A S+VS E D +N+I++V+AC+P ++A+ +E
Sbjct: 186 PRLTSVVKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRIAVMVE 245
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
+++K G + K +YR L+FN D N +FR++VLLG V+PE I ++T EMASD
Sbjct: 246 CPLFQKLGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTR 305
Query: 126 QL---------WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+L +E R G + F KC RCG ++ ++
Sbjct: 306 KLENKKIEEKALFECERGGAPKATTDQF--------------KCGRCGQRKTTYYQLQTR 351
Query: 172 ----PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 352 SADEPMTTFVTCVNCNNHW 370
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 116 bits (290), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + ++KCND +R+ R+ LY ALSKV+ EA + + +V AC+P+++A+S+E+ M+E
Sbjct: 29 PKLTSMIKCNDALRDKFREILYEALSKVASEAEGED--LARVNACDPVRIAVSVETVMFE 86
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMA 121
K GRS+ KFKYR ++FN D N + R++VLLG +KPE ++ MTA+EMA
Sbjct: 87 KLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 80/111 (72%), Gaps = 2/111 (1%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + ++KCND +R+ R+ LY ALSKV EA + + +V AC+P+++A+S+E+ M+E
Sbjct: 29 PKLTSMIKCNDALRDKFREILYEALSKVVSEAEGED--LARVNACDPVRIAVSVETVMFE 86
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMA 121
K GRS+ KFKYR ++FN D N + R++VLLG +KPE ++ MTA+EMA
Sbjct: 87 KLGRSNGAQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 110/197 (55%), Gaps = 33/197 (16%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHD-----KNVIDQVKACNPIQVAISME 65
PK + +VKCND R+ +R+ L A +VS E + D +N++D+V+A +P +VA+++E
Sbjct: 181 PKLTSLVKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVAVTVE 240
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
SA++E+ G S+ T++ KYR ++FN N +FR++VL+G V PE + +++ EMASD
Sbjct: 241 SALFERLGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPDEMASD-- 298
Query: 126 QLWYENSRKGRAETNGRIFSGLV-------SPKNIVYGICKCSRCGHKRMSFI------- 171
R + N +I + +PK KC+RCG ++ ++
Sbjct: 299 ---------ARKQENMQIKEKALFDCERGAAPKATTDQF-KCARCGQRKTTYYQLQTRSA 348
Query: 172 --PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 349 DEPMTTFVTCVNCNNHW 365
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 106/183 (57%), Gaps = 22/183 (12%)
Query: 16 VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS 75
++KCND +R+ +R+ L AL +V+ EA D V A +P++VA+S+ES M+EK GRS
Sbjct: 203 MLKCNDPVRDKIRELLVDALCRVAGEA--DDYERKSVNASDPLRVAVSVESLMFEKLGRS 260
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ K KYR ++FN D N + R++VL G++ PE ++ ++A+EMASDK + N K
Sbjct: 261 TGAQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRK-QENNQIKE 319
Query: 136 RAETNGRIFS---GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCY 183
+A +F GL + + KC RCG ++ ++ P+ ++TC+NC
Sbjct: 320 KA-----LFDCERGLAAKASTDQ--FKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCD 372
Query: 184 QYW 186
+W
Sbjct: 373 NHW 375
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 22/183 (12%)
Query: 16 VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS 75
++KCND +R+ +R+ L AL +V+ EA D + V A +P++VA+S+ES M+EK GRS
Sbjct: 203 MLKCNDPVRDKIRELLMEALCRVAGEA--DDYERESVNASDPLRVAVSVESLMFEKLGRS 260
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ K KYR ++FN D N + R++VL G++ PE ++ ++A++MASDK + N K
Sbjct: 261 TGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRK-QENNQIKE 319
Query: 136 RAETNGRIFS---GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCY 183
+A +F GL + + KC RCG ++ ++ P+ ++TC+NC
Sbjct: 320 KA-----LFDCERGLAAKASTDQ--FKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCD 372
Query: 184 QYW 186
+W
Sbjct: 373 NHW 375
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 22/183 (12%)
Query: 16 VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS 75
++KCND +R+ +R+ L AL +V+ EA D + V A +P++VA+S+ES M+EK GRS
Sbjct: 203 MLKCNDPVRDKIRELLVEALCRVAGEA--DDYERESVNASDPLRVAVSVESLMFEKLGRS 260
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ K KYR ++FN D N + R++VL G++ PE ++ ++A++MASDK + N K
Sbjct: 261 TGAQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRK-QENNQIKE 319
Query: 136 RAETNGRIFS---GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCY 183
+A +F GL + + KC RCG ++ ++ P+ ++TC+NC
Sbjct: 320 KA-----LFDCERGLAAKAST--DQFKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCD 372
Query: 184 QYW 186
+W
Sbjct: 373 NHW 375
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
ST PK ++K +D R+ +++ L+ ALSKV+ EA D++++ V +PI+VA+++ES
Sbjct: 183 STAPPKLKTMIKSSDATRDKIKEILHEALSKVTREA--DEDLVAVVNDSDPIRVAVTVES 240
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++EKWG S+ K KYR L+FN D N +FR+KVLLG V+PE ++NM+ EMAS++ +
Sbjct: 241 VLFEKWGPSNGAQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRK 300
Query: 127 LWYE 130
Y+
Sbjct: 301 QEYQ 304
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 87/156 (55%), Gaps = 21/156 (13%)
Query: 41 EAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRK 100
EA HD +K C+PIQ+A S+ESA++ KWG S+ + KYR LLFN DPKN +FR+
Sbjct: 5 EAKHDT-----LKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRR 59
Query: 101 KVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVS-PKNIVYGICK 159
K+L+G++K E + M A +MASD+MQ RK + ++ +V + K
Sbjct: 60 KILVGEIKAEEVAEMDAGQMASDEMQ------RKNQGIQAKSLWKCIVGREQEGTTDQFK 113
Query: 160 CSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
C +CG KR ++ P+ ++TC C +W
Sbjct: 114 CGKCGEKRTTYYQMQTRSADEPMTTYVTCTICDNHW 149
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/118 (44%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 17 VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS 76
VKC+D +R VR L +L +V+ E D +++ V+ +PI VA +ES M+E+ G +
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKED--LMEAVRLRDPIIVAADVESLMFERMGLFN 254
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
T + KYR +LFN DPKN + R+KVLLG +KPE +V MTA+EMAS++ Q + RK
Sbjct: 255 GTKQLKYRSILFNMKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMASNQRQFENDQIRK 312
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 16/185 (8%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + K D R+ R+ L A K E + + VK + ++VA+++ESA++
Sbjct: 195 PKVGNLTKAGDSTRDRFREFLIEAFKKCCSEVTDEH--LAMVKKTDLVRVAVAVESALFS 252
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
K G+S + K KYR ++FN D N +FR+++L+G++KPE I NMTA +MASD + E
Sbjct: 253 KLGQSKGSEKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTADDMASDARKKENE 312
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
+ R+ R + S +C +CG ++ ++ P+ + C+N
Sbjct: 313 SIREKALFECERGLQNVASTDQF-----RCGKCGQRKTTYFQLQTRSADEPMTTFVQCVN 367
Query: 182 CYQYW 186
C W
Sbjct: 368 CNARW 372
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 2/118 (1%)
Query: 17 VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS 76
VKC+D +R VR L +L +V+ E D +++ V+ +PI VA +ES M+E+ G +
Sbjct: 197 VKCSDGLRSKVRHILVESLCRVAKEVKED--LMEAVRLRDPIIVAADVESLMFERMGLFN 254
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
T + KYR +LFN DPKN + R+K+LLG +KPE +V MTA+EMAS++ Q + RK
Sbjct: 255 GTKQLKYRSILFNMKDPKNPDLRRKLLLGQIKPEKLVTMTAEEMASNQRQFENDQIRK 312
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
Query: 17 VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS 76
VKC+D +R VR L +L++V+ E + + V + +PI VA +ES M++K G +
Sbjct: 275 VKCDDALRGKVRSILVESLTRVAKET--EAGLRRAVSSRDPICVAADVESVMFQKMGAFN 332
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSR 133
KYR +LFN DPKN + R+KVLLG +KPE +V MT++EMAS+ Q +EN++
Sbjct: 333 GAKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQ--FENAQ 387
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 34/193 (17%)
Query: 12 KASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEK 71
KA + K ND R+ +R+ L A KV EA + + + A +P+QVA+ +E+A++ K
Sbjct: 124 KARPLPKSNDATRDKMREVLLEAFQKVPQEAEGQE--LARANAKDPVQVAVEVENALFSK 181
Query: 72 WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD-------- 123
+ K KYR ++FN DP N + R+++LLG + + M+A++MASD
Sbjct: 182 LESTKVDKKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASDQRKAENKQ 241
Query: 124 -KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PL 173
K + +E R + E F KC +CG + ++ P+
Sbjct: 242 IKDKALFECERGMKQEATTDQF--------------KCGKCGRRECTYFQKQTRSADEPM 287
Query: 174 RRHITCLNCYQYW 186
++TC+NC W
Sbjct: 288 TTYVTCVNCNNRW 300
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 72/117 (61%), Gaps = 1/117 (0%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY 69
+P S + K D R+ VR+ L +L KV+ E D + +V AC+P VA+S+ESAM+
Sbjct: 593 IPTHSTMKKTGDSKRDKVREILQTSLVKVASEIV-DTEMKTRVTACDPSVVAVSVESAMF 651
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
EK G +K KYR +LFN D N + R+KVL+G++ E +V M +EM S+K+Q
Sbjct: 652 EKLGCFMGPHKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQ 708
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
+ +P + + K D R+ VR+ L +L+KV+ E D + +V AC+P VA+S+E+
Sbjct: 101 AVKIPTHATMKKTGDSKRDKVREILQTSLAKVASEVV-DTEMKTRVTACDPWVVAVSVET 159
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
AM+E G K KYR +LFN D N + R+KVLLG++ E +V M +EM S
Sbjct: 160 AMFENLGCFMGPQKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGSS--- 216
Query: 127 LWYENSRK 134
WY NSR+
Sbjct: 217 -WYTNSRR 223
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 16/178 (8%)
Query: 18 KCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSE 77
K D R+ R+ L A K E + + I VK+ + ++V +++E+ ++ K G +
Sbjct: 180 KSGDPNRDRFRELLLDAFKKCCSELTDEHSKI--VKSTDFVKVTLAVETVLFSKLGLFNG 237
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA 137
K KYR +LFN D N +FR++VL+G++K E IVNMTA +MASD + E R+
Sbjct: 238 KEKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASDARKKENEVIREKAL 297
Query: 138 ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
R + S +C +CG ++ ++ P+ +TC+NC W
Sbjct: 298 FECERGMQNVASTDQF-----RCGKCGQRKTTYFQLQTRSADEPMTTFVTCVNCNARW 350
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 89/165 (53%), Gaps = 35/165 (21%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + + KCND +R+ VR+ L ALSKV EA D++++D V AC+PI+VA+
Sbjct: 157 PKLTSISKCNDALRDKVRELLSEALSKVVGEA--DEDIMDAVNACDPIRVAV-------- 206
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
F+ D KN + R+KVLLG V PE ++ M +EMASD+ QL E
Sbjct: 207 -----------------FS-GDAKNPDLRRKVLLGQVMPERLLEMGPEEMASDRRQL--E 246
Query: 131 NSR-KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPLR 174
N + K +A + + + +PK KC RCG ++ ++ L+
Sbjct: 247 NQQIKEKALFDCELGA---APKATTDQF-KCGRCGQRKTTYYQLQ 287
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q AI++E+AM+ +W + + YK K+R+L FN DPKN + R+ V G + P +++++ +
Sbjct: 191 QTAIAIENAMHAQWSDTGKEYKAKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPE 250
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
E+ SD+ + R+ R S G CK +C + R + P+
Sbjct: 251 ELGSDERRNSNAKIREHATNEAVRGQKKEASTDAFKCGKCKQRKCTYYQLQTRSADEPMT 310
Query: 175 RHITCLNCYQYW 186
+TC+NC W
Sbjct: 311 TFVTCVNCDNRW 322
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 64 MESAMYEKWGRS----SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+E A++E S S YK K R L FN D KN + R++VL G + PE++V M+A+E
Sbjct: 180 IEDALHELLAGSGSSVSGEYKAKARSLCFNLKDAKNPDLRERVLSGSIPPESLVRMSAEE 239
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPLRRHITC 179
+ASD+ + ++ A+ R + + + +C RC ++ ++ P+ +TC
Sbjct: 240 LASDEQKRKNREMKEWLAKEATRGVNNAATTD-----MFQCGRCKQRKCTYYPMTTFVTC 294
Query: 180 LNCYQYW 186
NC Q W
Sbjct: 295 TNCGQRW 301
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 85/184 (46%), Gaps = 21/184 (11%)
Query: 13 ASKVVKCNDCIREIVRKNL-YGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEK 71
ASK+ + N+ R+ R + YG + AH + + + + ++ +E AM EK
Sbjct: 156 ASKIEQTNNATRDRSRDVIAYG------LALAHCEGNCEDISVTSLARIVEEVEDAMSEK 209
Query: 72 WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN 131
W + YK K R+L FN DPKN + R+ + ++ T+++++++E+ SD+ + ++
Sbjct: 210 WKDLGKEYKAKLRQLAFNMKDPKNPDLRRAIAKREIDATTLIDLSSEELGSDERRAANQS 269
Query: 132 SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNC 182
R+ G K KC +CG + +F P+ +TC+NC
Sbjct: 270 IRE---HAEAEAVRG--QRKEASTTAFKCGKCGQRACTFYQLQTRSADEPMTTFVTCVNC 324
Query: 183 YQYW 186
W
Sbjct: 325 ENRW 328
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 87/202 (43%), Gaps = 37/202 (18%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISME 65
FS + P+ C + R+ VR L AL+ + Q +P Q+ ++E
Sbjct: 160 FSVDPPR------CGNETRDKVRSMLAEALAVGYVGGGDTGPSSLQ----SPNQLGAAIE 209
Query: 66 SAMYEKWGRS----------SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
A+Y+ G S YK K R L FN D KN + R++VL G V PET+V +
Sbjct: 210 EALYDLMGGGGGGGGGREAVSAEYKAKARSLCFNLKDAKNPDLRERVLSGSVPPETLVRL 269
Query: 116 TAKEMASD-------KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH--- 165
+A+EMASD +++ W A TN + G CK +C +
Sbjct: 270 SAEEMASDEQKKKNRELKEWLAKEAVRGATTNA------ATTDMFQCGRCKQRKCTYYQL 323
Query: 166 -KRMSFIPLRRHITCLNCYQYW 186
R + P+ +TC NC Q W
Sbjct: 324 QTRSADEPMTTFVTCTNCGQRW 345
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
PK + + KCND +R+ VR+ L ALSKV EA D++++D V AC+PI+VA+S+ES M+E
Sbjct: 129 PKLTSISKCNDALRDKVRELLSEALSKVVGEA--DEDIMDAVNACDPIRVAVSVESVMFE 186
Query: 71 KW 72
KW
Sbjct: 187 KW 188
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 69/142 (48%), Gaps = 27/142 (19%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
AI++E+A + +G + E YK K R L N + N + R++VL GDV P+ VNMT E
Sbjct: 164 AIAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDE 223
Query: 120 MASDK-----MQLWYENSRKGR-AETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-- 171
+ SD+ ++ EN K A+ I S L +C +CG +++++
Sbjct: 224 LKSDERRALDQKIQKENMDKAMVAQAERSISSSL-----------QCGKCGQRKVTYTEA 272
Query: 172 -------PLRRHITCLNCYQYW 186
P+ TCLNC + W
Sbjct: 273 QTRSADEPMTLFCTCLNCGKSW 294
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/109 (33%), Positives = 65/109 (59%), Gaps = 5/109 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR V+K++ G LSK S E+ + + + ++ +E ++++ +G ++ YK +
Sbjct: 772 IRHNVKKSILGILSKRSEESEDLR-----MHPSSITRLVDKIEDSLHKLFGETNVKYKNR 826
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN 131
YR ++FN D +NH +KV++GDV +V MTA++MAS K+ W +N
Sbjct: 827 YRSIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMASKKLAEWRQN 875
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
+R+ VR + AL V+ EAA + + + P A ++E+A+++ +G +++ YK K
Sbjct: 367 LRQKVRGGIQQALELVATEAAGEAGRLPE-----PAPTAEAVEAALFKLYGGTTKDYKQK 421
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
+R L FN D N + R VL GD+ P+ V MTA E+A+ ++ + RK + E
Sbjct: 422 FRTLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKELAAY----RKAKEE 473
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 20/144 (13%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
++ +ESAMYE +G ++E Y + + FN +DPKN +FR KV+ GD+ E I +++ +
Sbjct: 154 LSARIESAMYEHFGGANEQYLNHAKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQ 213
Query: 120 MAS-DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF-------- 170
MA DK++ N + I +G + ++ ++ +C +C KR +F
Sbjct: 214 MAGKDKIEQKKANKEDKIFQDKMFITAGNLGAESDMF---QCRKCKQKRTTFYQKQTRSA 270
Query: 171 -------IPLRR-HITCLNCYQYW 186
+PL + ITC NC W
Sbjct: 271 DEPMTAELPLLQVFITCKNCGHEW 294
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++AI E ++E +SE Y+ R +FN D KN R+ VL+G V PE M
Sbjct: 168 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 227
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
TA EMASD+M+ E +++ E + G +P ++ KC +CG K ++
Sbjct: 228 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG--TPSDMF----KCGKCGKKNCTYTQVQ 281
Query: 172 ------PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 282 TRSADEPMTTFVFCRECGNRW 302
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 31/181 (17%)
Query: 17 VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS 76
+K ND R+ + L AL + +A + ++A+ +E+ M++ +G ++
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDADY-------------FELALDIEAEMFKLFGETN 72
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
YK K+R+L N + KNH+ R VL G + PE + MT++E+AS ++Q RK
Sbjct: 73 PNYKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKELQ----EQRKAL 128
Query: 137 AET--NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQY 185
E I G K + +C +C + ++ P+ + C NC
Sbjct: 129 EEACLKEAIRGG---QKQATTNMFRCHKCKKRECTYYQLQTRSADEPMTTFVQCTNCNNR 185
Query: 186 W 186
W
Sbjct: 186 W 186
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++AI E ++E +SE Y+ R +FN D KN R+ VL+G V PE M
Sbjct: 17 DPEELAIRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 76
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
TA EMASD+M+ E +++ E + G +P ++ KC +CG K ++
Sbjct: 77 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG--TPSDMF----KCGKCGKKNCTYTQVQ 130
Query: 172 ------PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 131 TRSADEPMTTFVFCRECGNRW 151
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ E ++E +SE Y+ R +FN D KN R+ VL+G V PE M
Sbjct: 173 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 232
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
TA EMASD+M+ E +++ E + G +P ++ KC +CG K ++
Sbjct: 233 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG--TPSDMF----KCGKCGKKNCTYTQVQ 286
Query: 172 ------PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 287 TRSADEPMTTFVFCRECGNRW 307
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 78/175 (44%), Gaps = 14/175 (8%)
Query: 16 VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS 75
+ ND +R R+ L AL +I + A +AI +ES++Y+ + +
Sbjct: 150 TLTTNDQVRLKAREMLQSALESGNIPSG----------AYESEFLAIRIESSIYDLFNNT 199
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
YK + R + N D N R VL+G V P+ + +MT++EMAS +M+ E K
Sbjct: 200 DPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEEMASKEMKELREKYTKE 259
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHITCLNCYQYW 186
E + +G + G CK ++C + R + P+ + C NC W
Sbjct: 260 TIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTTFVYCNNCGHRW 314
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 4/137 (2%)
Query: 54 ACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
A +P ++A +ES ++++ + Y+ + R + N DPKN R VL+G +KPE +
Sbjct: 149 AADPDELAERIESTCFDEFNNTDTKYRSRIRSRVANLKDPKNPNLRLGVLIGSIKPERLA 208
Query: 114 NMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMS 169
MTA+EMASD+++ + K + + + + G CK S C + R +
Sbjct: 209 KMTAEEMASDELKQLRQKLTKEAIDDHQMALTSGTKTDLLKCGKCKKSNCTYNQVQTRSA 268
Query: 170 FIPLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 269 DEPMTTFAFCNECGNRW 285
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ E ++E +SE Y+ R +FN D KN R+ VL+G V PE M
Sbjct: 104 DPEELAVRTERKLFEVHRGTSEKYRAALRSRVFNLRDKKNLVLRENVLIGAVTPEKFAVM 163
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
TA EMASD+M+ E +++ E + G +P ++ KC +CG K ++
Sbjct: 164 TADEMASDEMKAQREKFTKQAIEEYQMAVQEG--TPSDMF----KCGKCGKKNCTYTQVQ 217
Query: 172 ------PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 218 TRSADEPMTTFVFCRECGNRW 238
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P AS D IR+ VR +L L K D N+ + + KA +VA +E +Y
Sbjct: 826 PPASASKPSADQIRQSVRHSLKDILMKRLT----DSNLKVPEEKAA---KVATKIEKELY 878
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 879 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 16/140 (11%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P +VA + E ++E++ ++ YK + R + N DPKN + +VL G++ P + MT
Sbjct: 164 PEEVAAACEQLIFEEFKDTNVKYKQRIRSRVNNLRDPKNPMLKVRVLGGEISPARLAVMT 223
Query: 117 AKEMASDKM-QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF----- 170
++EMASD+M +L E +++G E +G + + KC RCG + ++
Sbjct: 224 SEEMASDEMKKLRQEFTKEGIREAQMAKNAGTKT------NLFKCGRCGKRETTYNQLQT 277
Query: 171 ----IPLRRHITCLNCYQYW 186
P+ + C+NC W
Sbjct: 278 RSADEPMTTFVYCMNCGNRW 297
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 66.2 bits (160), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E +Y
Sbjct: 914 PPASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELYS 967
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 968 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 8/118 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P+ASK D IR+ VR +L L K E+ + V ++ A +VA +E ++
Sbjct: 899 PRASK--PSADQIRQSVRHSLKDILMKRLTES--NLKVPEEKAA----KVATKIEKELFS 950
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+++E+AS ++ W
Sbjct: 951 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELASKELAAW 1008
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + ++P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 975 VSNVHLPAASACKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 1028
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 1029 EKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1088
Query: 125 MQLW 128
+ W
Sbjct: 1089 LAAW 1092
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 65.9 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E +Y
Sbjct: 914 PPASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELYS 967
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 968 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E +Y
Sbjct: 826 PPASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELYS 879
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 880 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 65.9 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 6 FSTNVPKAS-----KVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQ- 59
F VP+ + K + +D I +V L + SK +++A+D+ ID+
Sbjct: 289 FDAGVPEPATQPNLKRSRASD-IDPVVADTLSESESK-RMKSANDEEAIDKDSIIQKADD 346
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A+ +E +++ +G ++ YK K R LLFN D N E R++VL GD+ P+ + +MTA+E
Sbjct: 347 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 406
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 407 LASKELSEW----RLAKAE 421
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 910 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 963
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 964 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
Query: 125 MQLW 128
+ W
Sbjct: 1024 LAAW 1027
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 911 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 964
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 965 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1024
Query: 125 MQLW 128
+ W
Sbjct: 1025 LAAW 1028
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 910 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 963
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 964 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
Query: 125 MQLW 128
+ W
Sbjct: 1024 LAAW 1027
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 910 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 963
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 964 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
Query: 125 MQLW 128
+ W
Sbjct: 1024 LAAW 1027
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
++ A +E+A ++ +G S E Y+ K R L N + N R +VL +V PE VNMT
Sbjct: 162 LRKAAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSNLSLRTRVLTNEVTPERFVNMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+E+ SD+ + E RK + E + G P+ + +C +CG +++++
Sbjct: 222 HEELKSDERR---EEDRKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 SADEPMTLFCTCLACGKSW 295
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 40 IEAAHDKNVIDQVKACNPIQ-VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEF 98
+++A+D+ ID+ +A+ +E +++ +G ++ YK K R LLFN D N E
Sbjct: 1 MKSANDEEAIDKDSIIQKADDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPEL 60
Query: 99 RKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
R++VL GD+ P+ + +MTA+E+AS ++ W R +AE
Sbjct: 61 RERVLSGDITPDRLCSMTAEELASKELSEW----RLAKAE 96
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 65.5 bits (158), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+Q A +E+A + +G + E+Y+ K R L N N R +VL G+V P+ V+MT
Sbjct: 162 LQKATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+E+ SD+ + E RK + E + G P+ + +C +CG +++++
Sbjct: 222 HEELKSDERR---EEDRKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 SADEPMTLFCTCLACGKSW 295
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 1035 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 1088
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 1089 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1148
Query: 125 MQLW 128
+ W
Sbjct: 1149 LAAW 1152
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
+ + + P AS D IR+ VR +L L K D N+ +V +VA +
Sbjct: 910 VLNVHPPAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKI 963
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 964 EKELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 1023
Query: 125 MQLW 128
+ W
Sbjct: 1024 LAAW 1027
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 184 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 237
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 238 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 295
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 65.5 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P A+ + D IR+ VR +L L K D N+ ++ +VA +E ++
Sbjct: 898 PAAAAIKPSADQIRQSVRHSLKDILMK----RLTDSNL--KIPEEKSAKVATKIEKELFS 951
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 952 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1009
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+AI +ES++Y+ + + YK + R + N D N R VL+G V P+ + +MT++E
Sbjct: 185 LAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEE 244
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRR 175
MAS +M+ E K E + +G + G CK ++C + R + P+
Sbjct: 245 MASKEMKELREKYTKETIEDHQMAVTGGTETDLLRCGKCKQTKCTYNQVQTRSADEPMTT 304
Query: 176 HITCLNCYQYW 186
+ C NC W
Sbjct: 305 FVYCNNCGHRW 315
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P AS D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 827 PAASASKPSADQIRQSVRHSLKDILMKRLT----DSNLKIPEEKAA---KVATKIEKELF 879
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 880 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 938
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 76/139 (54%), Gaps = 12/139 (8%)
Query: 6 FSTNVPKAS-----KVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQ- 59
F VP+ + K + +D I +V L + SK +++A+D+ ID+
Sbjct: 289 FDAGVPEPATQPNLKRSRASD-IDPVVADTLSESESK-RMKSANDEEAIDKDSIIQKADD 346
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A+ +E +++ +G ++ YK K R LLFN D N E R++VL GD+ P+ + +MTA+E
Sbjct: 347 LAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEE 406
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 407 LASKELSEW----RLAKAE 421
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 681 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 734
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 735 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 792
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P VA ++E+ +Y +G ++ YK K R LLFN D N E R +V+ G++ PE + +M
Sbjct: 390 SPQTVASTIEAELYNLFGGVNKKYKEKGRSLLFNLKDRNNPELRARVMSGEIPPEKLCSM 449
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R +AE
Sbjct: 450 TAEELASKELSEW----RMAKAE 468
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 40 IEAAHDKNVIDQVKACNPIQ-VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEF 98
+++A+D+ ID+ +A+ +E +++ +G ++ YK K R LLFN D N E
Sbjct: 1 MKSANDEEAIDKDSIIQKADDLAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPEL 60
Query: 99 RKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
R++VL GD+ P+ + +MTA+E+AS ++ W R +AE
Sbjct: 61 RERVLSGDITPDRLCSMTAEELASKELSEW----RLAKAE 96
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 184 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 237
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 238 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 295
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E A+Y YK + R L N DPKN E R+K LLG + PE + M
Sbjct: 28 DPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKM 87
Query: 116 TAKEMASDKM----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG------- 164
T +EMASD M Q + ++S N + + K + KC RC
Sbjct: 88 TPEEMASDDMKQMRQKYVQDS------INAAQMAKVQGTKTDQF---KCERCDKRNCSQL 138
Query: 165 HKRMSFIPLRRHITCLNCYQYWAS 188
H R P+ + C C W S
Sbjct: 139 HIRDGDEPIITFVICDECGNRWKS 162
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P AS D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 930 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNLKIPEEKAA---KVATKIEKELF 982
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 983 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1041
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q+ + +E +Y+ + R +E Y+ K R L+FN DPKN + R ++ G ++P +V + +K
Sbjct: 203 QLGLQIEDELYKSFPRLAE-YQNKARSLMFNLKDPKNPDLRMSLIEGVIEPNQLVRLDSK 261
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLV--SPKNIVYGICKCSRCGHKRMSFI----- 171
+AS +Q E ++ +A N R + + K G C +C K ++
Sbjct: 262 SLASKALQ--DERNKTQQANLNARRSDWFIENAAKKGNKGFFTCKKCHSKNTTYFQMQTR 319
Query: 172 ----PLRRHITCLNCYQYW 186
P+ ITCL+C W
Sbjct: 320 GADEPMTNFITCLDCKNQW 338
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 930 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 983
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 984 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1041
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P AS D IR+ VR +L L K D N+ + + KA +VA +E ++
Sbjct: 827 PAASASKPSADQIRQSVRHSLKDILMKRLT----DSNLKVPEEKAA---KVATKIEKELF 879
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 880 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 938
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAIS 63
I + +VP S D IR+ VR +L L + E+ N+ + + KA +VA
Sbjct: 911 IPNVHVPTTSTSKPSADQIRQSVRHSLKDILMRRLTES----NLKVPEEKAA---KVATK 963
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD 123
+E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS
Sbjct: 964 IEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASK 1023
Query: 124 KMQLW 128
++ W
Sbjct: 1024 ELAAW 1028
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P AS D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 915 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNLKIPEEKAA---KVATKIEKELF 967
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 968 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S + P A D IR+ VR +L ++ ++ D N+ +V +VA +E
Sbjct: 914 SVHPPAAPASKPSTDQIRQSVRH----SLKEILMKRLTDSNL--KVPEEKAAKVATKIEK 967
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++
Sbjct: 968 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELA 1027
Query: 127 LW 128
W
Sbjct: 1028 AW 1029
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 920 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 973
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 974 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1031
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 915 PAASASKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 968
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 969 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
+T+ P +S D IR+ VR++L L K ++ I + +A +VA +E
Sbjct: 911 NTHTPVSSATKPSVDQIRQSVRQSLKEILEKRLTDSTLK---IPEERAA---KVATKIEK 964
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN K+VL G+V P+ ++ M+ +E+AS ++
Sbjct: 965 ELFSFFRDTDSKYKNKYRSLIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKELA 1024
Query: 127 LWYENSRKGRAE 138
W + + E
Sbjct: 1025 AWRKRENRHTIE 1036
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 64.7 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
+T+ P S D IR+ VR +L L K D N+ +V +VA +E
Sbjct: 945 NTHPPATSTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEK 998
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++
Sbjct: 999 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELA 1058
Query: 127 LW 128
W
Sbjct: 1059 AW 1060
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 5/89 (5%)
Query: 54 ACNPIQVAISMESAMYEKWGRSS-ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
A NP ++A+ +E A++E+ GR + + Y R L+FN DP+N R +VL +V ET+
Sbjct: 141 ALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAETL 200
Query: 113 VNMTAKEMASDKMQLWYENSRKGRAETNG 141
V MT E+A+ ++ W RK R E G
Sbjct: 201 VKMTPAELANKELIEW----RKKREEKIG 225
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 918 PAASTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 971
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 972 FFRDTDAKYKNKYRSLMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1029
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
+T+ P S D IR+ VR +L L K D N+ +V +VA +E
Sbjct: 914 NTHPPATSTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEK 967
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++
Sbjct: 968 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELA 1027
Query: 127 LW 128
W
Sbjct: 1028 AW 1029
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 6/122 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S + P A D IR+ VR +L ++ ++ D N+ +V +VA +E
Sbjct: 826 SVHPPAAPASKPSTDQIRQSVRH----SLKEILMKRLTDSNL--KVPEEKAAKVATKIEK 879
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++
Sbjct: 880 ELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELA 939
Query: 127 LW 128
W
Sbjct: 940 AW 941
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P A+ D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 894 PPAATSKPSADQIRQSVRHSLKDILMK----RLTDSNLKIPEEKAA---KVATKIEKELF 946
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 947 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1005
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P A+ D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 894 PPAATSKPSADQIRQSVRHSLKDILMK----RLTDSNLKIPEEKAA---KVATKIEKELF 946
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 947 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1005
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D + CN +A +E ++Y ++G ++ YK + R + N D KN R VL G ++P
Sbjct: 149 DMPEGCNTDSLAAKIEESIYNEFGDTNNKYKNRVRSRVSNLKDSKNPALRINVLHGAIEP 208
Query: 110 ETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK--- 166
E I MTA+EMASD M+ + K + +G + G C+ + C +
Sbjct: 209 ERIARMTAEEMASDDMKQLRQRLTKEAINDHQMATTGGTKTDLLKCGKCRKNNCTYNQVQ 268
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R + P+ C C W
Sbjct: 269 TRSADEPMTTFCFCNECGHRW 289
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 64.3 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMY 69
P A+ D IR+ VR +L L K D N+ I + KA +VA +E ++
Sbjct: 53 PPAATSKPSADQIRQSVRHSLKDILMK----RLTDSNLKIPEEKAA---KVATKIEKELF 105
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 106 SFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 164
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
++ A +E+A ++ +G + E Y+ K R L N + N R +VL +V PE VNMT
Sbjct: 162 LRKATDVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+E+ SD+ + E RK + E + G P+ + +C +CG +++++
Sbjct: 222 HEELKSDERR---EEDRKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 SADEPMTLFCTCLACGKSW 295
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
++ A +E+A ++ +G + E Y+ K R L N + N R +VL +V PE VNMT
Sbjct: 162 LRKATEVEAAAFKAFGPENKEVYRTKMRSLFQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+E+ SD+ + E RK + E + G P+ + +C +CG +++++
Sbjct: 222 HEELKSDERR---EEDRKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 SADEPMTLFCTCLACGKSW 295
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
++ +E +++ G + YK + R +FN D KN + R+KVL G + P+ I MTA+E
Sbjct: 165 LSAQIEESIFRDIGNTDGKYKNRVRSRIFNLRDAKNPDLRRKVLRGVITPQQIAVMTAEE 224
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRC----GHKRMSFIPLRR 175
MASD+M+ + + + + +G I G C C R S P+
Sbjct: 225 MASDEMKEIRKAMTREAIRKHQKARTGGTQTDLITCGKCSGKSCTYTQAQTRSSDEPMTT 284
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 285 FVLCNECGNRW 295
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 7/98 (7%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +++ +G ++ YK K R LLFN D N E R++VL GD+ PE + +MTA+E
Sbjct: 341 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 400
Query: 120 MASDKMQLWYENSRKGRAETNGRIF---SGLVSPKNIV 154
+AS ++ W R +AE ++ S V P+ +V
Sbjct: 401 LASKELSEW----RLAKAEEFAQMVVLPSKEVDPRRLV 434
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T V K + +R VRK L AL EA+ D+V+ ++A+ +E
Sbjct: 970 TEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEE 1024
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+++ + + YK KYR L+FN D +N +K+L G + P+ +V MT +E+AS ++
Sbjct: 1025 LFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR 1084
Query: 128 WYENSRKGRAE 138
W E K E
Sbjct: 1085 WREQENKHTIE 1095
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P A+ D IR+ VR +L + + D N+ +V +VA +E ++
Sbjct: 897 PPAAASKPSADQIRQSVRH----SLKDILMRRLTDSNL--KVPEEKAAKVATKIEKELFS 950
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 951 FFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1008
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
++ A +E+A ++ +G + E Y+ K R L N + N R +VL +V PE VNMT
Sbjct: 162 LRKATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
+E+ SD+ + E RK + E + G P+ + +C +CG +++++
Sbjct: 222 HEELKSDERR---EEDRKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 SADEPMTLFCTCLACGKSW 295
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T V K + +R VRK L AL EA+ D+V+ ++A+ +E
Sbjct: 970 TEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEE 1024
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+++ + + YK KYR L+FN D +N +K+L G + P+ +V MT +E+AS ++
Sbjct: 1025 LFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR 1084
Query: 128 WYENSRKGRAE 138
W E K E
Sbjct: 1085 WREQENKHTIE 1095
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 63.5 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T V K + +R VRK L AL EA+ D+V+ ++A+ +E
Sbjct: 958 TEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEE 1012
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+++ + + YK KYR L+FN D +N +K+L G + P+ +V MT +E+AS ++
Sbjct: 1013 LFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR 1072
Query: 128 WYENSRKGRAE 138
W E K E
Sbjct: 1073 WREQENKHTIE 1083
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 66/111 (59%), Gaps = 13/111 (11%)
Query: 28 RKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLL 87
R ++ GA++ + + +K ++D P +A +E+ +++ +G ++ YK K R LL
Sbjct: 277 RNDMIGAMAN---DGSQEKLLLD------PQVLAFEIEAELFKLFGGVNKKYKEKGRSLL 327
Query: 88 FNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
FNF D N + R+KV+ G++ E + +M+A+E+AS ++ W R+ +AE
Sbjct: 328 FNFKDKSNPKLREKVMYGEIAAERLCSMSAEELASKELAEW----RQAKAE 374
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
I +T++P D IR+ V+++L L K +++ I + +A +VA +
Sbjct: 941 ISATHLPAVPASKPSADQIRQSVKQSLKEILMKRLTDSSLK---IPEERAA---KVATRI 994
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 995 ERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKE 1054
Query: 125 MQLWYENSRKGRAE 138
+ W + + E
Sbjct: 1055 LAAWRQRENRHTIE 1068
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 15/128 (11%)
Query: 2 IHVIFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQV 60
+H +T+ P A D IR+ VR +L L K D N+ I + KA +V
Sbjct: 183 VHPPAATSKPSA-------DQIRQSVRHSLKDILMKRLT----DSNLKIPEEKAA---KV 228
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A +E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+
Sbjct: 229 ATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEEL 288
Query: 121 ASDKMQLW 128
AS ++ W
Sbjct: 289 ASKELAAW 296
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 63.5 bits (153), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 26/141 (18%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A ++E+A++ ++G +S YK K R L N D N R+ ++ GD+ P M++ EM
Sbjct: 162 AAAVETAVFNQFGSTSAEYKSKIRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEM 221
Query: 121 ASDK-----MQLWYEN------SRKGRAETNGRIFSGLVSPKNIVYGICKCSRC----GH 165
AS++ +L EN + + AET+G G CK +C
Sbjct: 222 ASEERRAADKRLQEENFFKSLAAAEQEAETDG-----------FQCGRCKQRKCRYRQAQ 270
Query: 166 KRMSFIPLRRHITCLNCYQYW 186
R + P+ +TC NC W
Sbjct: 271 TRSADEPMTTFVTCTNCGNRW 291
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 63.5 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
I +T++P D IR+ V+++L L K +++ I + +A +VA +
Sbjct: 924 ISATHLPAVPASKPSADQIRQSVKQSLKEILMKRLTDSSLK---IPEERAA---KVATRI 977
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 978 ERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKE 1037
Query: 125 MQLWYENSRKGRAE 138
+ W + + E
Sbjct: 1038 LAAWRQRENRHTIE 1051
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 920 PPASTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFC 973
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 974 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1031
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 63.2 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 27 VRKNLYGALSKVSIEAAHDKNV-IDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRR 85
+R+++ +L + ++ D N+ I + +A +VA+ +E ++ + + YK KYR
Sbjct: 84 IRQSVKHSLKDILMKRLTDSNLKIPEERAS---KVAMKIEKELFSFFRDTDAKYKNKYRS 140
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 141 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 183
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 63.2 bits (152), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 24 REIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKY 83
RE++ + L ++I A D ++ +E +++ ++ + YK +
Sbjct: 25 REMLSQALQAGDDYIAIGADCD-------------ELGAQIEESIFSEFQNTDPKYKNRV 71
Query: 84 RRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
R + N D KN R+ VL G+V P+ + MTA+EMASD+++L +N K +
Sbjct: 72 RSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDELKLIRKNLTKEAIRDHQVS 131
Query: 144 FSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G CK RC + R + P+ + C+ C W
Sbjct: 132 QTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMTTFVFCMECGNRW 178
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 11 PKASKV---VKCNDCIREIVRKNLYGALSK---VSIEAAHDKNVIDQVKACNPIQV---A 61
P AS+V V+ E +R N+ L + I+ A + N +K ++V A
Sbjct: 1266 PVASRVASPVRAGSTKSEPIRVNVRRTLKEQLLARIKEAQEANKDKAIKWLTSLEVEQFA 1325
Query: 62 ISMESAMYEKWGRSS-ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
S+ES MY +GR + YK KYR L+FN D KN +K+ V+P+ +V MT +++
Sbjct: 1326 KSVESEMYHSFGRDAGAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPEQL 1385
Query: 121 ASDKMQLWYENSRK 134
AS ++ W E +
Sbjct: 1386 ASQELAKWREEENR 1399
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 5 IFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISM 64
I +T++P D IR+ V+++L L K +++ I + +A +VA +
Sbjct: 836 ISATHLPAVPASKPSADQIRQSVKQSLKEILMKRLTDSSLK---IPEERAA---KVATRI 889
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS +
Sbjct: 890 ERELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKE 949
Query: 125 MQLWYENSRKGRAE 138
+ W + + E
Sbjct: 950 LAAWRQRENRHTIE 963
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A+ +E +++ +G ++ YK + R LLFN D N E R +VL GD+ PE + +MTA+E
Sbjct: 350 LALRIEEELFKLFGGVNKKYKERGRSLLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEE 409
Query: 120 MASDKMQLWYENSRKGRAETNGRI 143
+AS ++ W R +AE + ++
Sbjct: 410 LASKELSEW----RLAKAEEHAKM 429
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 63/118 (53%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P S D IR+ VR +L L K E+ + V ++ A +VA +E ++
Sbjct: 1089 PATSTSKPSADQIRQSVRHSLKDILMKRLTES--NLKVPEEKAA----KVATKIEKELFS 1142
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 1143 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1200
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 63.2 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 62/118 (52%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P AS D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 832 PPASTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFC 885
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 886 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 943
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P S D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 863 PATSTSKPSADQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 916
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 917 FFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 974
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N E R++V+ G++ PE + +M
Sbjct: 386 SPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSM 445
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R +AE
Sbjct: 446 TAEELASKELSEW----RIAKAE 464
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 916 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 973
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 974 MFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAW 1015
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 62.8 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N E R++V+ G++ PE + +M
Sbjct: 404 SPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSM 463
Query: 116 TAKEMASDKMQLW 128
TA+E+AS ++ W
Sbjct: 464 TAEELASKELSEW 476
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 48/73 (65%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N E R++V+ G++ PE + +M
Sbjct: 404 SPQTLAFEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVVAGEISPERLCSM 463
Query: 116 TAKEMASDKMQLW 128
TA+E+AS ++ W
Sbjct: 464 TAEELASKELSEW 476
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ +S YK KYR LLFN DP+N + KV+ GDV PE +V M++ +
Sbjct: 593 IAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLFLKVVRGDVTPEDLVQMSSIQ 652
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 653 LAPQELACWRDQEEK 667
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 919 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 976
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 977 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D IR+ VR +L L K D N+ +V +VA +E ++ + + YK
Sbjct: 10 DQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYK 63
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENS 132
KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W S
Sbjct: 64 NKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRS 115
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +++ +G ++ YK K R LLFN D N E R++VL GD+ PE + +MTA+E
Sbjct: 344 LAFRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIVPERLCSMTAEE 403
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 404 LASKELSEW----RLAKAE 418
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 62.8 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 920 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 977
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 978 MFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAW 1019
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 23/117 (19%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY 69
+P S + K D R+ VR+ L +L+KV+ E D + +V AC+P VAIS+ESAM+
Sbjct: 103 IPTDSTIKKTGDSKRDKVREILQTSLAKVATEVV-DTEMKTRVTACDPWVVAISVESAMF 161
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
E N+P + R+KVL+G++ E +V M +EM S+K+Q
Sbjct: 162 ES-------------------NNP---DLRRKVLIGEINGERLVTMERQEMGSEKIQ 196
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 919 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 976
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 977 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 919 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 976
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 977 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1018
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q+A +E ++ ++ + YK + R + N D KN RK VL G+V P+ + MTA+
Sbjct: 177 QLAAQIEEYIFCEFKNTDPKYKNRVRSRIANLKDIKNPNLRKSVLCGNVSPDRMAKMTAQ 236
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++L +N K + +G G CK RC + R + P+
Sbjct: 237 EMASDELKLIRKNLTKEAIRDHQVSQTGGTQTDLFTCGKCKKKRCTYTQVQTRSADEPMT 296
Query: 175 RHITCLNCYQYW 186
+ C +C W
Sbjct: 297 TFVFCNDCGNRW 308
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 838 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 895
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 896 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 937
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 62.4 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 831 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 888
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 889 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 930
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 5/131 (3%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T V K + +R VRK L AL EA+ D+V+ ++A+ +E
Sbjct: 1002 TEVKKTEPAQPSIEPVRLNVRKVLRDALLNRCKEASDLSLSGDEVR-----RMALRIEEE 1056
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+++ + + YK KYR L+FN D +N +K+L G + P+ +V MT +E+AS ++
Sbjct: 1057 LFKVFRDTGTRYKSKYRSLVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELAR 1116
Query: 128 WYENSRKGRAE 138
W E K E
Sbjct: 1117 WREQENKHTIE 1127
>gi|194742650|ref|XP_001953814.1| GF17954 [Drosophila ananassae]
gi|190626851|gb|EDV42375.1| GF17954 [Drosophila ananassae]
Length = 1976
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 7/136 (5%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQ------VKACNPIQ 59
F +VP S+ + +R +R++L L EA ++ Q + A
Sbjct: 1236 FGASVPSTSRSATKPEPVRIGIRRSLKEQLLARIKEAQDEEKASSQDATTQWLTAAEVDH 1295
Query: 60 VAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ES MY +GR YK KYR L+FN D KN +K+ V+P+ +V MTA+
Sbjct: 1296 FVKAVESEMYHSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTAE 1355
Query: 119 EMASDKMQLWYENSRK 134
++AS ++ W E +
Sbjct: 1356 QLASQELAKWREEENR 1371
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
L L K+ + + V V+ P +A+ +E +++ + ++ YK K R LLFN
Sbjct: 345 LTDELQKIDVGIGNQNQVAKPVQT--PESLALKIEEELFKLFSGVNKKYKEKGRSLLFNL 402
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
D N E R++V+ G++ PE + +MTA+E+AS ++ W R +AE
Sbjct: 403 KDRNNPELRERVMSGEITPERLCSMTAEELASKELSEW----RMAKAE 446
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
+T++P D IR V+++L L K +++ I + +A +VA +E
Sbjct: 919 ATHLPNVPASKPSADQIRHSVKQSLKEILMKRLTDSSLK---IPEERAA---KVATRIER 972
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++
Sbjct: 973 ELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELA 1032
Query: 127 LWYENSRKGRAE 138
W + + E
Sbjct: 1033 AWRQRENRHTIE 1044
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +++ +G ++ YK K R LLFN D N E R+ V+ G + PE + NM
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R+ +AE
Sbjct: 419 TAEELASKELSQW----RQAKAE 437
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 932 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 989
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 990 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1031
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 69 YEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
Y ++ + + YK KYR LLFN DPKN F KK++ V P +V MTA EMAS ++ W
Sbjct: 1030 YNQFSKVDQKYKTKYRSLLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQELAEW 1089
Query: 129 YENSRKGRAE 138
E K + E
Sbjct: 1090 RERENKHQIE 1099
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY 69
+P S + K D R+ V + L +L+KV+ E + + C+P VA+S+ESAM
Sbjct: 103 IPTHSTMKKTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAMS 162
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+LFN D N + R+KVL+G++ E +V M EM S+K+Q
Sbjct: 163 ----------------ILFNMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQ 203
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +++ +G ++ YK K R LLFN D N E R+ V+ G + PE + NM
Sbjct: 359 DPELLASKIELELFKLFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 418
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R+ +AE
Sbjct: 419 TAEELASKELSQW----RQAKAE 437
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW---GRSS 76
ND IR+ L+ +L A +NV D KA ++A ME+ ++ ++ +
Sbjct: 128 NDDIRDKAIIYLFKSL------LAGKENVYDHKKAG---RLAYDMEAGLFSRYLYNQNNQ 178
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
+ Y K + + FN DPKN F K+ GD++P ++ M A EMAS++ ++ N +
Sbjct: 179 KDYTLKLKSIAFNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASEEKKMERINILQES 238
Query: 137 AE---TNGRIFSGLVSPKNIVYGICKCSRCG---------HKRMSFIPLRRHITCLNCYQ 184
E ++ + + L+S + G KC +C R S P+ +TCL C
Sbjct: 239 LEACQSDWAVKNILLSKEGKKKGQFKCLKCHSMETVYYQLQTRSSDEPMTTFVTCLECNN 298
Query: 185 YW 186
W
Sbjct: 299 RW 300
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
+R VRK L +LS +A D+VK ++A+ +E +++ + + YK K
Sbjct: 812 VRINVRKVLRDSLSNRCKDADDISLSGDEVK-----RMAVRIEEELFKYFKDTGTKYKSK 866
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
YR L+FN D +N +K+L G + P+ +V MT +E+AS ++ W E +
Sbjct: 867 YRSLVFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQ 918
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 927 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 984
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 985 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1026
>gi|358390984|gb|EHK40389.1| hypothetical protein TRIATDRAFT_302747 [Trichoderma atroviride IMI
206040]
Length = 305
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 31/168 (18%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
+Y L+ SIE+ D I A+++E A + + YK K R L N
Sbjct: 154 IYNGLAYRSIESETD-----------VIARAVAVEHAAFTTLKGETPEYKKKIRSLFTNL 202
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD---KMQLWYENSRKGRAETNGRIFSGL 147
+ N + K+V+ GD+ PE VNMT +E+ S+ KM+L E +A+
Sbjct: 203 KNKSNRDLGKQVMAGDISPEKFVNMTDEELKSEDQRKMELELEKENMKKAQVP------- 255
Query: 148 VSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
++ K+I + +C +C KR+S+ P+ C+NC W
Sbjct: 256 MAEKSISDSL-ECGKCKKKRVSYTQAQTRSADEPMTTFCECMNCGNRW 302
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 62.0 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ +V +VA +E ++ + + YK KYR L
Sbjct: 1081 IRQSVRHSLKDILMKRLTDSNL--KVPEEKAAKVATKIEKELFSFFRDTDAKYKNKYRSL 1138
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M +E+AS ++ W
Sbjct: 1139 MFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELASKELAAW 1180
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+AI +ESA+Y+ + + YK + R + N D N R VL+G V P+ + +MT++E
Sbjct: 11 LAIRIESAIYDIFNNTDSKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEE 70
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI 171
MAS +M+ E K E + +G + G CK ++C + ++ +
Sbjct: 71 MASKEMKELREKYTKETIEDHQMAVTGGTETDLLKCGKCKQNKCTYNQLILV 122
>gi|340376666|ref|XP_003386853.1| PREDICTED: transcription elongation factor A protein 2-like
[Amphimedon queenslandica]
Length = 314
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISME 65
FS ++ +S+V ++ +R R +Y A+ K ++ N+ D + N ++ ++E
Sbjct: 134 FSLSIDGSSRVPPTSNAVRNTCRDMVYKAMKK----GLNEVNIEDDTRLYN---LSAAIE 186
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
++ ++ ++ YK + R + N D KN ++K++ G++ P I M+ +EMAS+ M
Sbjct: 187 DQIFSEFKDTNMKYKNRVRSRVSNIGDLKNPGLKQKIISGEISPARIAKMSTEEMASEDM 246
Query: 126 -QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRR 175
+L E +++ ++ + G S + KC +CG + S+ P+
Sbjct: 247 KKLRQEYTKEAIRDSQMAVTQGTKS------DLLKCGKCGKRNCSYNQMQTRSADEPMTT 300
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 301 FVLCNECGHRW 311
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ ++ +VA +E ++ + + YK KYR L
Sbjct: 926 IRQSVKHSLKDILMKRLTDSNL--KIPEERAAKVATKIEKELFSFFRDTDAKYKNKYRSL 983
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 984 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1025
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L + ++ D N+ ++ +VA +E ++ + + YK KYR L
Sbjct: 918 IRQSVKHSLKDILMKRLTDSNL--KIPEERASKVATKIEKELFSFFRDTDAKYKNKYRSL 975
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 976 MFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 1017
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+++ +L ++ ++ + + ++ ++ + P +VA E ++ + YK KYR L
Sbjct: 802 IRRSVRDSLEEILLKRSKESDL--KISSDRPAEVARRTEKELFALFQGVDSKYKNKYRSL 859
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
FN D KN+ K+VL G+V P +V MTA+E+AS ++ W + + E
Sbjct: 860 TFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEELASKELAAWRKRENRHTIE 911
>gi|440800297|gb|ELR21336.1| transcription factor sii (tfiis), central domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 653
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES-AMYEKWGRSSETYKF 81
+RE V +L ALS A ++ + A + I E M+E ++S YK
Sbjct: 232 VRERVVASLAEALSMPRPATAENERSVVDAAAVQALAEGIETEMWRMFEL--QTSSAYKA 289
Query: 82 KYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
K+R LLFN D +N E R+ VL G++ P + T+KE+A ++ W RK RAE
Sbjct: 290 KFRTLLFNLKDERNQELRESVLSGEMAPAELCKKTSKELAPTELAEW----RKQRAE 342
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P +A +E+ +++ +G ++ YK K R LLFN D N E R++V+ G + PE + +MT
Sbjct: 363 PKLLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDHNNPELRERVMFGKIPPEQLCSMT 422
Query: 117 AKEMASDKMQLWYENSRKGRAE 138
A+E+AS ++ W R +AE
Sbjct: 423 AEELASKELSQW----RIAKAE 440
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 46/75 (61%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
VA S+E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 709 VAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQ 768
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 769 LAPQELARWRDQEEK 783
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KVL GDV P +V M++ +
Sbjct: 602 IAADIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSSTQ 661
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 662 LAPQELARWRDQEEK 676
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ ++N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMHKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ ++N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMHKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 45/69 (65%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A ++E+A+++ + YK KYR L+FN DP+N + +V+ GD+ P+ +V M+A E
Sbjct: 800 IAANIEAAIFDLMQCTDYRYKTKYRSLVFNLRDPRNKDLFLQVIRGDITPQGLVRMSATE 859
Query: 120 MASDKMQLW 128
+AS ++ W
Sbjct: 860 LASQELAQW 868
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ +S YK KYR LLFN DP+N + KV+ GDV P +V M+ +
Sbjct: 593 IAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQGDVTPHDLVRMSTAQ 652
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 653 LAPQELARWRDQEEK 667
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 47/80 (58%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
+VA +E ++ + + YK KYR L+FN DPKN+ KKVL G+V P+ ++ M+ +
Sbjct: 965 KVATRIERELFSFFRDTDSKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPE 1024
Query: 119 EMASDKMQLWYENSRKGRAE 138
E+AS ++ W + + E
Sbjct: 1025 ELASKELAAWRQRENRHTIE 1044
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 60.8 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Query: 25 EIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYR 84
E +R+++ +L ++ I+ D ++ V+ + ++A +E ++ + + YK KYR
Sbjct: 690 EAIRRSVRDSLKEILIQRLKDSDLNISVERAS--ELAKKIERELFHLYKDTDNKYKNKYR 747
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
L+FN D KN+ K+VL G++ P ++ M+ +E+AS ++ W + + E
Sbjct: 748 SLMFNLKDTKNNILCKRVLKGEISPANLIRMSPEELASKELAAWRQRENRHTIE 801
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 28/178 (15%)
Query: 20 NDCIREIVRKNLYGAL-SKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSET 78
ND +R + L AL SK + HD P ++AI +E ++E + +
Sbjct: 138 NDEMRNKCIQMLLSALQSKELPDGTHD-----------PEELAIKIEKKLFEVHRGTGDK 186
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKGRA 137
Y+ R +FN D KN R+ VL G V P MT++EMASD+M+ E +++
Sbjct: 187 YRSAVRSRVFNLRDKKNAALRENVLTGVVTPAKFAVMTSEEMASDEMRSQREKFTKQAIE 246
Query: 138 ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
E + G +P ++ KC +CG K ++ P+ + C C W
Sbjct: 247 EHQMSVQEG--TPSDMF----KCGKCGKKNCTYTQVQTRSADEPMTTFVFCRECGNRW 298
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 11/109 (10%)
Query: 37 KVSIEAA---HDKNVIDQVKAC----NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFN 89
K IEAA H + ID+ +P +A +E+ +++ +G ++ YK K R LLFN
Sbjct: 254 KKEIEAAQTPHGQEHIDEYVGKEVVRDPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFN 313
Query: 90 FNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
D N E R+KV+ G++ P + +MTA+E+AS ++ W R +AE
Sbjct: 314 LKDRNNPELREKVMSGEIPPGRLCSMTAEELASKELSEW----RMAKAE 358
>gi|315046468|ref|XP_003172609.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
gi|311342995|gb|EFR02198.1| transcription elongation factor S-II [Arthroderma gypseum CBS
118893]
Length = 297
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+Q A +E+A ++ +G + E Y+ K R L N + N R +VL ++ P+ VNMT
Sbjct: 162 LQKATEVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEIAPDRFVNMT 221
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
E+ SD+ + E K + E + G P+ + +C +CG +++++
Sbjct: 222 HDELKSDERR---EEDLKIQKENMDKAMVG--QPERSISKSLQCGKCGQRKVTYTEAQTR 276
Query: 172 ----PLRRHITCLNCYQYW 186
P+ TCL C + W
Sbjct: 277 AADEPMTLFCTCLACGKSW 295
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
M KW + YK K R+L FN DPKN + R + +G++ + ++++T +E+ S++ +
Sbjct: 1 MTAKWPEGGKDYKAKVRQLAFNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQ 60
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
E R+ R S G CK +C + R + P+ +TC+NC
Sbjct: 61 ANEKIREFAEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVNCG 120
Query: 184 QYW 186
W
Sbjct: 121 NRW 123
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ G+V P +V M++ +
Sbjct: 565 IAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSVQ 624
Query: 120 MASDKMQLWYENSRKGRAET 139
+AS ++ W + K E+
Sbjct: 625 LASQELARWRDQEEKKGLES 644
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P +A +E+ +++ +G ++ YK K R LLFN D N E R++V+ G + PE + +MT
Sbjct: 393 PELLASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKILPEQLCSMT 452
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRI 143
A+E+AS ++ W R +AE +I
Sbjct: 453 AEELASKELSEW----RIAKAEEFDKI 475
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 25 EIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYR 84
E +R+++ +L ++ I+ + N+ V+ + VA +E ++ + YK KYR
Sbjct: 654 EAIRRSVRDSLKEILIQRLKESNLSISVEKAS--DVAKKIERELFHLNKDTDNKYKNKYR 711
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
L+FN D KN+ KKVL G++ P ++ M+ +E+AS ++ W + + E
Sbjct: 712 SLMFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEELASKELAAWRKRENRHTIE 765
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ +S YK KYR LLFN DP+N + KV+ GDV P +V M + +
Sbjct: 550 IAAGIEAALFDLTQGTSCRYKIKYRSLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQ 609
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 610 LAPQELARWRDQEEK 624
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N E KV+ GD+ P +V M++ +
Sbjct: 696 IAAGIEAALFNLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 755
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 756 LAPQELARWRDREEK 770
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 60.5 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N E R+KV+ G++ P + +M
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R +AE
Sbjct: 450 TAEELASKELSEW----RMAKAE 468
>gi|255730739|ref|XP_002550294.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
gi|240132251|gb|EER31809.1| hypothetical protein CTRG_04592 [Candida tropicalis MYA-3404]
Length = 312
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 18/161 (11%)
Query: 38 VSIEAAHDKNVIDQVKACNPI-QVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKN 95
SI A + +D+ + I ++A +ES +++ ++ R +TY+ K R N + KN
Sbjct: 155 ASIGALYTSLAVDREDSSQHILKIATEIESEVFKSQYSRVDDTYRNKLRSFTMNLRNKKN 214
Query: 96 HEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIV 154
E R+++L + + MT KEMA + ++L E K +F + K V
Sbjct: 215 PELRERILTKQITAAAFIKMTPKEMAPEALKLEIEKLHKQN------LFDAQGATEKRAV 268
Query: 155 YGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
C +C HK++S+ PL TC NC W
Sbjct: 269 TDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 309
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +++ + ++ YK K R LLFN D N E R++VL GD+ PE + +MTA+E
Sbjct: 339 LAFRIEEELFKLFRGVNKKYKEKGRSLLFNLKDKSNPELRERVLSGDIAPERLCSMTAEE 398
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 399 LASKELSEW----RLAKAE 413
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P+ +V M++ +
Sbjct: 566 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDVTPQGLVQMSSIQ 625
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 626 LAPQRLAHWRDQEEK 640
>gi|390465645|ref|XP_003733445.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Callithrix jacchus]
Length = 1096
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++++
Sbjct: 539 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSRQ 598
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 599 LAPQELARWRDQEEK 613
>gi|320164226|gb|EFW41125.1| transcription elongation factor A [Capsaspora owczarzaki ATCC
30864]
Length = 433
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNP-IQVAISME 65
S N S +V D R+ K L AL D V D+ + + +A S+E
Sbjct: 129 SVNSNAISTLVHTGDAHRDSCIKALAKAL---------DPTVTDETQISEYFVSLAQSIE 179
Query: 66 SAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
+++Y+ S YK R +FN +N +FRK VL G + PE + MT++EMA+ +
Sbjct: 180 ASIYKLHNSEVSPKYKTAVRSKMFNLK--QNEDFRKAVLNGSIPPEKVAVMTSEEMATKE 237
Query: 125 MQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRR 175
+ N+ + + T + + +PK +C +CG + S+ P+
Sbjct: 238 L-----NAERKKLTTEAMNDAQMPAPKMSKTDQLRCGKCGKRDASYFQLQTRSSDEPMTT 292
Query: 176 HITCLNCYQYWASTNPEIRV 195
+TC C W + + R
Sbjct: 293 FVTCNVCGHNWKDDDSDCRA 312
>gi|149034011|gb|EDL88794.1| death associated transcription factor 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 2099
Score = 60.1 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 7 STNVPKASKV-----------VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKAC 55
S NVP AS V + N IR+ +R++L L K +D + D +
Sbjct: 483 SANVPAASPVPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWK----RVNDSD--DLIMTE 536
Query: 56 NPI-QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
N + ++A+ +E M+ + + YK KYR ++FN DPKN +VL ++ +V
Sbjct: 537 NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVR 596
Query: 115 MTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
M +E+ S ++ +W E K E+ ++ +
Sbjct: 597 MKPEELVSKELSMWTEKPTKSVIESRTKLLN 627
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 60.1 bits (144), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 6 FSTNVPKASKV-----VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQV 60
F T+ P+A +KC RE++ L V+I A D ++
Sbjct: 128 FITSFPRAPSTSDSVRIKC----RELLAVALKTGDDHVAIGADVD-------------EL 170
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
+E A+++++ + YK + R + N D KN R+ VL G++ P+ M+A+EM
Sbjct: 171 GAQIEEAVFQEFKNTDAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEM 230
Query: 121 ASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRH 176
ASD+++ +N K + +G G CK C + R + P+
Sbjct: 231 ASDELKEMRKNLTKEAIREHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 290
Query: 177 ITCLNCYQYW 186
+ C NC W
Sbjct: 291 VFCNNCGNRW 300
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSG 146
+FN D N + R++VL G++ PE ++ ++A+EMASDK + + ++ R +
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHIKEKALFDCERGLAA 60
Query: 147 LVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
S + KC RCG ++ ++ P+ ++TC+NC +W
Sbjct: 61 KASTEQF-----KCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHW 104
>gi|392339728|ref|XP_003753889.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
gi|392346978|ref|XP_003749689.1| PREDICTED: death-inducer obliterator 1 [Rattus norvegicus]
Length = 2258
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 18/151 (11%)
Query: 7 STNVPKASKV-----------VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKAC 55
S NVP AS V + N IR+ +R++L L K +D + D +
Sbjct: 642 SANVPAASPVPGRLGPVSPAPSQPNSQIRQNIRRSLKEILWK----RVNDSD--DLIMTE 695
Query: 56 NPI-QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
N + ++A+ +E M+ + + YK KYR ++FN DPKN +VL ++ +V
Sbjct: 696 NEVGKIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVR 755
Query: 115 MTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
M +E+ S ++ +W E K E+ ++ +
Sbjct: 756 MKPEELVSKELSMWTEKPTKSVIESRTKLLN 786
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 4/141 (2%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D CN +A +E ++Y ++G ++ YK + R + N D +N R VL G + P
Sbjct: 170 DMPDGCNVDGLAAKIEESIYNEFGDTNMKYKNRVRSRVSNLKDSRNPALRLNVLHGAIDP 229
Query: 110 ETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK--- 166
E I M+A+EMASD+M+ + K + +G + G C+ + C +
Sbjct: 230 ERIARMSAEEMASDEMKELRQRFTKESINDHQMAVTGGTKTDLLKCGKCRKNNCTYNQVQ 289
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R + P+ C C W
Sbjct: 290 TRSADEPMTTFCYCNECGHRW 310
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
M+ + G + YK KYR L+FN D N + R++VL G++ + +VN++A+E+ASD +
Sbjct: 1 MHRQNGGVNARYKAKYRSLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKS 60
Query: 128 WYENSRKG---RAETNGRIFSGLVSPKNIVYGICKCSRCGHKRM----SFIPLRRHITCL 180
RK AE + + G CK +C + +M + P+ +TC
Sbjct: 61 ENAQIRKTALFEAERGQHMKK--ATTDQFQCGKCKQRKCQYYQMQTRSADEPMTTFVTCT 118
Query: 181 NCYQYW 186
NC W
Sbjct: 119 NCGNRW 124
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 157 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 216
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 217 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 276
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 277 TFVVCNECGNRW 288
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 59.7 bits (143), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 53 KACNPI-QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPET 111
+ C P ++A +E ++Y ++ + YK + R + N D KN + R+ V+ G + PE
Sbjct: 168 EGCAPACELAAGIEQSIYNEFKNTEMKYKTRVRSRVANLRDSKNPKLREGVMYGFIPPER 227
Query: 112 IVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF- 170
+ +MT++EMASD ++ E K + G KC RCG +R +
Sbjct: 228 MASMTSEEMASDDLKKLREKFTKEAINDHQMAQQG-----GTETDFFKCGRCGKRRCQYN 282
Query: 171 --------IPLRRHITCLNCYQYW 186
P+ + C++C W
Sbjct: 283 QVQTRSADEPMTTFVLCVSCGNRW 306
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N E KV+ GD+ P +V M++ +
Sbjct: 581 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 640
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 641 LAPQELARWRDQEEK 655
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 59.7 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N E KV+ GD+ P +V M++ +
Sbjct: 659 IAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSVQ 718
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 719 LAPQELARWRDQEEK 733
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 59.7 bits (143), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 4/135 (2%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 232 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 291
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 292 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 351
Query: 175 RHITCLNCYQYWAST 189
+ C C W T
Sbjct: 352 TFVVCNECGNRWKDT 366
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 59.7 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N + R+KV+ G++ E + +M
Sbjct: 264 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 323
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
+A+E+AS ++ W R+ +AE
Sbjct: 324 SAEELASKELAEW----RQAKAE 342
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 59.3 bits (142), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 150 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 209
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ ++N K + +G G CK C + R + P+
Sbjct: 210 EMASDELKEMWKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVT 269
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 270 TFVVCNECGNRW 281
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 14/109 (12%)
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSG 146
+FN D N + R++VL G++ PE ++ ++A+EMASDK + ++ R +
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKALFDCERGLAA 60
Query: 147 LVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
S KC RCG ++ ++ P+ ++TC+NC +W
Sbjct: 61 KASTDQF-----KCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHW 104
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N + R+KV+ G++ E + +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
+A+E+AS ++ W R+ +AE
Sbjct: 375 SAEELASKELAEW----RQAKAE 393
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 59.3 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E+ +++ +G ++ YK K R LLFN D N + R+KV+ G++ E + +M
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
+A+E+AS ++ W R+ +AE
Sbjct: 375 SAEELASKELAEW----RQAKAE 393
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 708 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 765
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ S
Sbjct: 766 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWKEKPTKSMIESRNKLHS 825
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 59.3 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 2 IHVIFSTNVPKASKVVKCNDCIREIVRKNLYGALSK---VSIEAAHDKN----VIDQVKA 54
IH + + P A+ V + E +R N+ L + I+ AHD +
Sbjct: 1415 IHALPKKDKPPANVVASQSPFKPEPIRLNVRRTLKEQLLARIKEAHDAEQSAGTSTTTQW 1474
Query: 55 CNPI---QVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPE 110
PI Q S+ES MY +G YK KYR L+FN D KN +K+ V+P+
Sbjct: 1475 LTPIEAEQFVKSVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPK 1534
Query: 111 TIVNMTAKEMASDKMQLWYENSRKGRAE 138
+V MT +E+AS ++ W E + + E
Sbjct: 1535 QLVAMTPEELASQELAKWREEEARHQLE 1562
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 672 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALLIEKEMFNLFRVTDNRYKSKYRS 729
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L+FN DPKN +VL ++ +V M +E+ S ++ +W E + K E+ ++ +
Sbjct: 730 LMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTKPVMESRTKLHN 789
Query: 146 GLVSP 150
P
Sbjct: 790 ETKKP 794
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 672 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALLIEKEMFNLFRVTDNRYKSKYRS 729
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L+FN DPKN +VL ++ +V M +E+ S ++ +W E + K E+ ++ +
Sbjct: 730 LMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTKPVMESRTKLHN 789
Query: 146 GLVSP 150
P
Sbjct: 790 ETKKP 794
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 672 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALLIEKEMFNLFRVTDNRYKSKYRS 729
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L+FN DPKN +VL ++ +V M +E+ S ++ +W E + K E+ ++ +
Sbjct: 730 LMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTKPVMESRTKLHN 789
Query: 146 GLVSP 150
P
Sbjct: 790 ETKKP 794
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 58.9 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D V + + +VA+++E M+ + + YK KYR
Sbjct: 850 IRQNIRRSLKEILWKRVNDSD--DLVMTESEVGKVALNIEKEMFNLFQVTDNRYKSKYRS 907
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGR 142
++FN DPKN +VL G++ +V M +E+ S ++ +W E K E+ +
Sbjct: 908 IMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKELSVWKEKPTKAVIESRKK 964
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEMRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|426241849|ref|XP_004023383.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Ovis aries]
Length = 1927
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 65/125 (52%), Gaps = 3/125 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 620 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALLIEKEMFNLFRVTDNRYKSKYRS 677
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L+FN DPKN +VL ++ +V M +E+ S ++ +W E + K E+ ++ +
Sbjct: 678 LMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWRERTTKPVMESRTKLHN 737
Query: 146 GLVSP 150
P
Sbjct: 738 ETKKP 742
>gi|154320754|ref|XP_001559693.1| transcription elongation factor S-II [Botryotinia fuckeliana
B05.10]
gi|347838992|emb|CCD53564.1| similar to transcription elongation factor s-ii [Botryotinia
fuckeliana]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+++E A ++ +G ++ YK K R L N N + RK+V+ GD+ P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKEYKEKLRSLFQNLKQVSNTQLRKRVMSGDIDPARFVVMTHEEL 228
Query: 121 ASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
S++M+ L EN +K + + S ++ C +CG K++S+
Sbjct: 229 KSEEMKKKDDALELENMKKAQVPMAEKSISDALT----------CGKCGQKKVSYSQAQT 278
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 279 RSADEPMTTFCECQVCGHRW 298
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 787
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +++ + ++ YK K R LLFN D N E R+ V+ G + PE + NM
Sbjct: 353 DPELLASKIELELFKLFRGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNM 412
Query: 116 TAKEMASDKMQLWYENSRKGRAE 138
TA+E+AS ++ W R+ +AE
Sbjct: 413 TAEELASKELSQW----RQAKAE 431
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEIRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GD+ P +V M++ +
Sbjct: 582 IAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDITPHGLVQMSSMQ 641
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 642 LAPQELARWRDQEEK 656
>gi|348554091|ref|XP_003462859.1| PREDICTED: death-inducer obliterator 1 [Cavia porcellus]
Length = 2259
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWKERPTKSVIESRSKL 782
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++ A+++E+ +++++G +E YK K R L N N R+ V+ G++ E + M+
Sbjct: 169 LKRALAIETRIFDEYGSVNEGYKSKVRTLANNLKSKSNPGLRESVVSGELTIEKLCTMSV 228
Query: 118 KEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
+EMAS++ Q L E K R T+ + + + KC +C ++ ++
Sbjct: 229 EEMASEEAQARDRKLAEEALFKARGATSAQAETDMF----------KCGKCQGRKCTYFQ 278
Query: 172 --------PLRRHITCLNCYQYW 186
P+ +TC+NC +W
Sbjct: 279 MQTRSADEPMTTFVTCVNCGNHW 301
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEIRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I C +A +E ++ G + YK
Sbjct: 137 DAVRTKCREMLTAAL-----QTDHDHVAIGADCEC----LAGQIEECIFRDVGNTDMKYK 187
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R L N D KN R+KVL G + P+ I MT++EMASD+++ + K +
Sbjct: 188 NRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 247
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 248 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E +++ ++ + + YK + R + N D KN + ++ V++G + PE I NM+
Sbjct: 161 PKELAAKIEDSIHLEFKNTDQKYKARIRSRVANLKDKKNPKLKEGVIMGLIPPERIANMS 220
Query: 117 AKEMASDKMQLWYENSRKGRAE-TNGRIFSGLVS-PKNIVYGICKCSRCGHKRMSF 170
A+EMASD+M R+ RA+ T I +S + V + KC +CG K ++
Sbjct: 221 AEEMASDEM-------RQLRAKFTKESIDDHQMSRQEGTVTDLFKCGKCGKKNCTY 269
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 178 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 237
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 238 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 297
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 298 TFVVCNECGNRW 309
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 13/181 (7%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY 69
+P + +D +R R+ L AL D I + ++ +E A+Y
Sbjct: 175 IPSFPRAPSTSDSVRMKCREMLAAAL-----RTGDDYIAI----GADEEELGSQIEEAIY 225
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWY 129
++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 226 QELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMR 285
Query: 130 ENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQY 185
+N K + +G G CK C + R + P+ + C C
Sbjct: 286 KNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNR 345
Query: 186 W 186
W
Sbjct: 346 W 346
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISME 65
F T+ PKA +D +R R+ L AL A NV D++ A +E
Sbjct: 128 FITSFPKAPIT---SDSVRIKCRELLAAALKTGDDHIAIGANV-DELGA--------QIE 175
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
A+++++ + YK + R + N D KN R+ VL G++ P+ MTA+EMASD++
Sbjct: 176 DAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASDEL 235
Query: 126 QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLN 181
+ +N K + +G G CK C + R + P+ + C
Sbjct: 236 KEMRKNLTKEAIREHQMAKTGGTETDLFSCGKCKKKNCTYTQVQTRSADEPMTTFVFCNE 295
Query: 182 CYQYW 186
C W
Sbjct: 296 CGNRW 300
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 166 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 225
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 226 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 285
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 286 TFVVCNECGNRW 297
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A++++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 170 ELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAE 229
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 230 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 289
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 290 TFVVCNECGNRW 301
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E+AMYE + G ++E YK + R +LFN KN R ++L+G + P+T+
Sbjct: 350 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 407
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 408 MSSQDMASEELQ 419
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 145 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 204
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 205 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 264
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 265 TFVVCNECGNRW 276
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 264 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 323
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 324 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 383
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 384 TFVVCNECGNRW 395
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 166 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 225
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 226 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 285
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 286 TFVVCNECGNRW 297
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 101 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 160
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 161 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 220
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 221 TFVVCNECGNRW 232
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A++++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 170 ELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNIAPDRFAKMTAE 229
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 230 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMT 289
Query: 175 RHITCLNCYQYWAS 188
+ C C W S
Sbjct: 290 TFVVCNECGNRWKS 303
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 153 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 212
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 213 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 272
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 273 TFVVCNECGNRW 284
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 156 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 215
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 216 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 275
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 276 TFVVCNECGNRW 287
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E+AMYE + G ++E YK + R +LFN KN R ++L+G + P+T+
Sbjct: 378 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 435
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 436 MSSQDMASEELQ 447
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 166 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 225
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 226 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 285
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 286 TFVVCNECGNRW 297
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 20/144 (13%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P A +E A+Y + YK + R L N DPKN R+K L+G + P+ + M
Sbjct: 28 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 87
Query: 116 TAKEMASDKM----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG------- 164
T +EMASD + Q + ++S N + K ++ KC RC
Sbjct: 88 TPEEMASDDLKQMRQQYVQDS------INAAQLGNVEGTKTNLF---KCERCQKRNCTQL 138
Query: 165 HKRMSFIPLRRHITCLNCYQYWAS 188
H R PL + C +C W S
Sbjct: 139 HIRDGDEPLITFVMCDDCGNRWKS 162
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 132 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 191
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 192 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 251
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 252 TFVVCNECGNRW 263
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|148675399|gb|EDL07346.1| death inducer-obliterator 1, isoform CRA_a [Mus musculus]
Length = 2056
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 510 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 567
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 568 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 627
>gi|76096375|ref|NP_780760.2| death-inducer obliterator 1 isoform 3 [Mus musculus]
gi|152031593|sp|Q8C9B9.4|DIDO1_MOUSE RecName: Full=Death-inducer obliterator 1; Short=DIO-1; AltName:
Full=Death-associated transcription factor 1;
Short=DATF-1
Length = 2256
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 784
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 126 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 185
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 186 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 245
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 246 TFVVCNECGNRW 257
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D V + + +VA+++E M+ + + YK KYR
Sbjct: 763 IRQNIRRSLKEILWKRVNDSD--DLVMTESEVGKVALNIEKEMFNLFHVTDNRYKSKYRS 820
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGR 142
++FN DPKN +VL G++ +V M +E+ S ++ +W E K E+ +
Sbjct: 821 IMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKELSVWKEKPAKAVIESRKK 877
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E+AMYE + G ++E YK + R +LFN KN R ++L+G + P+T+
Sbjct: 291 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 348
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 349 MSSQDMASEELQ 360
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 101 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 160
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 161 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 220
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 221 TFVVCNECGNRW 232
>gi|426328836|ref|XP_004025454.1| PREDICTED: SPOC domain-containing protein 1 [Gorilla gorilla
gorilla]
Length = 1173
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVNPYDLVRMSSMQ 699
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 700 LAPQELARWRDQEEK 714
>gi|340517178|gb|EGR47423.1| predicted protein [Trichoderma reesei QM6a]
Length = 309
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
I A+++E+A Y + YK K R L N + N + K+V+ GD+ PE V+MT
Sbjct: 174 IAKAVAVENAAYTVFNGEGAEYKKKIRSLFANLKNKSNRDLGKRVMSGDIAPERFVSMTD 233
Query: 118 KEMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
+++ S+ +++L EN +K + + S + +C +C KR+S+
Sbjct: 234 EDLKSEDQRRMELELEKENMKKAQVPMAEKSISDSL----------ECGKCKKKRVSYTQ 283
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 284 AQTRSADEPMTTFCECMNCGNRW 306
>gi|33988379|gb|AAH07910.2| SPOCD1 protein, partial [Homo sapiens]
Length = 342
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 38 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 97
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 98 LAPQELARWRDQEEK 112
>gi|196008633|ref|XP_002114182.1| predicted protein [Trichoplax adhaerens]
gi|190583201|gb|EDV23272.1| predicted protein [Trichoplax adhaerens]
Length = 996
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 12/116 (10%)
Query: 27 VRKNLYGA----LSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
VR+N+Y A LSKV+ + A +V+ ++ + +E ++ + + YK K
Sbjct: 503 VRENIYKAFRDILSKVAEKIAIQMSVVSKL--------SKDIEEQLFNLFNDTGSRYKNK 554
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L FN D KN +++L GD+ P +V MT++E+A+ ++ W E K E
Sbjct: 555 YRSLSFNLKDEKNKALVERILHGDISPSKLVRMTSEELANKELAQWREKETKKNIE 610
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + ++++ +E ++ G + YK
Sbjct: 109 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCVRLSAQIEECIFRDVGNTDMKYK 159
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 160 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 219
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 220 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 269
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 38/185 (20%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAA--HDKNVIDQVKACNPIQVAISMESAMYEKWGRSSE 77
ND +R K LY +L ++ E+ +D + D A+++E+A+ G+ S
Sbjct: 148 NDKVRNACLKLLYQSL-EIGKESHVWNDSQIFD---------AAVAVEAAILSNQGKGSV 197
Query: 78 T--YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYE 130
T Y+ K R L N D N + R +V+ GD+ + +V MT +E+ASDK +L +
Sbjct: 198 TADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTNEELASDKRKREIEELQMQ 257
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
N K + + + +C RC ++ + P+ +TC N
Sbjct: 258 NLFKAKG----------AAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTN 307
Query: 182 CYQYW 186
C W
Sbjct: 308 CNHKW 312
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E+AMYE + G ++E YK + R +LFN KN R ++L+G + P+T+
Sbjct: 357 QLALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSK 414
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 415 MSSQDMASEELQ 426
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A++++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 170 ELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAE 229
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 230 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 289
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 290 TFVVCNECGNRW 301
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E +++++ + YK + R + N D KN R+ VL G V PE + MTA+
Sbjct: 177 ELGAQIEECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMTAE 236
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 237 EMASDELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKSCTYTQVQTRSADEPMT 296
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 297 TFVFCNECGNRW 308
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 181 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 240
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 241 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 300
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 301 TFVVCNECGNRW 312
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 9/175 (5%)
Query: 16 VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS 75
+ + ND R+ R+ AL+ + I+ V A + +E++M KW
Sbjct: 1 LTRVNDAARDRTREIFADALALCVTDGK-----IESVDAKKLASIVDQIENSMTAKWPSG 55
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ YK K R+L FN D KN + R + G++ +++++ +E+ S++ + E R+
Sbjct: 56 GKDYKAKVRQLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIREL 115
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
R S G CK +C + R + P+ +TC+ C W
Sbjct: 116 AEWEAVRGQQQEASTDAFKCGKCKQRKCTYYQLQTRSADEPMTTFVTCVECGNRW 170
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 189 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 248
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 249 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 308
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 309 TFVVCNECGNRW 320
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + AHD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSET- 78
ND +R K LY +L V D + A+ +E A Y K G S+
Sbjct: 140 NDRVRNACLKLLYNSL-----------EVQDHAEPQTVFASAMKIEEAAYTKIGASTTNN 188
Query: 79 -YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA 137
Y+ K R L N D N E R+KVL G + P +V M ++E+AS ++ E+ R+
Sbjct: 189 DYRGKVRSLSLNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQNL 248
Query: 138 ETNGRIFSGLVSPKNIVYGICKCSRCGHKRM----SFIPLRRHITCLNCYQYW 186
+ G CK + + +M + P+ +TC+NC W
Sbjct: 249 HNAKGAEAQEAETDAFQCGKCKQRKTRYYQMQTRSADEPMTTFVTCVNCNHKW 301
>gi|441636142|ref|XP_003276474.2| PREDICTED: SPOC domain-containing protein 1 [Nomascus leucogenys]
Length = 1522
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 945 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 1004
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 1005 LAPQELARWRDQEEK 1019
>gi|397515906|ref|XP_003828182.1| PREDICTED: SPOC domain-containing protein 1 isoform 2 [Pan
paniscus]
Length = 1216
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 700 LAPQELARWRDQEEK 714
>gi|397515904|ref|XP_003828181.1| PREDICTED: SPOC domain-containing protein 1 isoform 1 [Pan
paniscus]
Length = 1203
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 700 LAPQELARWRDQEEK 714
>gi|332808286|ref|XP_003307989.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Pan troglodytes]
Length = 1204
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 641 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 700
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 701 LAPQELARWRDQEEK 715
>gi|119627993|gb|EAX07588.1| SPOC domain containing 1, isoform CRA_c [Homo sapiens]
Length = 626
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 63 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 122
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 123 LAPQELARWRDQEEK 137
>gi|119627992|gb|EAX07587.1| SPOC domain containing 1, isoform CRA_b [Homo sapiens]
Length = 644
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 68 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 127
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 128 LAPQELARWRDQEEK 142
>gi|89365915|gb|AAI14431.1| SPOCD1 protein [Homo sapiens]
Length = 1203
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 700 LAPQELARWRDQEEK 714
>gi|47271475|ref|NP_653170.3| SPOC domain-containing protein 1 [Homo sapiens]
gi|74749560|sp|Q6ZMY3.1|SPOC1_HUMAN RecName: Full=SPOC domain-containing protein 1
gi|47077409|dbj|BAD18592.1| unnamed protein product [Homo sapiens]
Length = 1216
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 640 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 699
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 700 LAPQELARWRDQEEK 714
>gi|21749290|dbj|BAC03567.1| unnamed protein product [Homo sapiens]
Length = 696
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 133 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 192
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 193 LAPQELARWRDQEEK 207
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ ++N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMWKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPVT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 181 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 240
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 241 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 300
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 301 TFVVCNECGNRW 312
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P +A +E+ +++ + ++ YK K R LLFN D N E R++V+ G + PE + +MT
Sbjct: 414 PELLASRIEAELFKLFQGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGKIPPEQLCSMT 473
Query: 117 AKEMASDKMQLWYENSRKGRAE 138
A+E+AS ++ W R +AE
Sbjct: 474 AEELASKELSQW----RIAKAE 491
>gi|195391634|ref|XP_002054465.1| GJ24469 [Drosophila virilis]
gi|194152551|gb|EDW67985.1| GJ24469 [Drosophila virilis]
Length = 2055
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 64 MESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+ES MY +GR S YK KYR L+FN D KN +K+ V+P+ +V MT E+AS
Sbjct: 1349 VESEMYHSFGRDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1408
Query: 123 DKMQLWYENSRK 134
++ W E +
Sbjct: 1409 QELAKWREEENR 1420
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ +TA+
Sbjct: 167 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|351714883|gb|EHB17802.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 2261
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 62/118 (52%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 675 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 732
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++
Sbjct: 733 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWKEKPTKPVMESRSKL 790
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ +TA+
Sbjct: 146 ELGSQIEEAIYQELRNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDLFARLTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 265
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 266 TFVVCNECGNRW 277
>gi|116283511|gb|AAH29069.1| SPOCD1 protein [Homo sapiens]
Length = 266
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV P +V M++ +
Sbjct: 22 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTPYDLVRMSSMQ 81
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 82 LAPQELARWRDQEEK 96
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P VA +E+ M++ +G ++ Y + R + FN D N +FR KVL GD++P ++ M
Sbjct: 368 PDMVAQRIEATMFKHFGGVNKEYGARNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMH 427
Query: 117 AKEMAS--DKMQLWYENSRKGRAE 138
+EMAS ++ + N+ GRAE
Sbjct: 428 TQEMASELERRTVEARNANFGRAE 451
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD 123
+E A++++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD
Sbjct: 175 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 234
Query: 124 KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITC 179
+++ +N K + +G G CK C + R + P+ + C
Sbjct: 235 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVC 294
Query: 180 LNCYQYW 186
C W
Sbjct: 295 NECGNRW 301
>gi|28204843|gb|AAH44755.1| Dido1 protein [Mus musculus]
Length = 643
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 127 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 184
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 185 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 244
>gi|145349019|ref|XP_001418938.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579168|gb|ABO97231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 528
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 64/123 (52%), Gaps = 13/123 (10%)
Query: 23 IREIVRKNLYGALSKVSIE---AAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
IR VR+ + A+ + E + HD+ P +VA ++ESA+Y+K G + + Y
Sbjct: 11 IRSTVREFILKAMEMAAEETKASGHDE------ANGTPSEVAAAVESALYKKCGSADKEY 64
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAET 139
+ + R L N D +N + R +VL D+K +V+M+ ++A+ ++ W RK R E
Sbjct: 65 RTRARSLKSNLQDVRNPQLRARVLANDLKASQLVDMSPLQLANKELVEW----RKARQEI 120
Query: 140 NGR 142
G
Sbjct: 121 AGE 123
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 58.2 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 45/75 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ Y+ KYR LLFN DP+N + KV+ GDV P+ +V M + +
Sbjct: 625 LAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSVQ 684
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 685 LAPQELARWRDQEEK 699
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 2 IHVIFSTNVPKASKVVKCNDCIREIVRKNLYGALSK---VSIEAAHDKN----VIDQVKA 54
IH + + P A+ V + E +R N+ L + I+ AHD +
Sbjct: 1413 IHALPKKDKPPANVVASQSPFKPEPIRLNVRRTLKEQLLARIKEAHDAEQSAGTSTTTQW 1472
Query: 55 CNPI---QVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPE 110
PI Q S+ES MY +G YK KYR L+FN D KN +K+ V+P+
Sbjct: 1473 LTPIEAEQFVKSVESEMYNSFGCDVGSKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPK 1532
Query: 111 TIVNMTAKEMASDKMQLWYENSRKGRAE 138
+V MT +E+AS ++ W + + + E
Sbjct: 1533 QLVAMTPEELASQELAKWRQEEARHQLE 1560
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 706 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 763
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ W E K E+ ++ S
Sbjct: 764 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWKEKPTKSMIESRNKLHS 823
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD 123
+E A++++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD
Sbjct: 138 IEEAIFQELKNTDMKYKNRVRSRIANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASD 197
Query: 124 KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITC 179
+++ +N K + +G G CK C + R + P+ + C
Sbjct: 198 ELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVC 257
Query: 180 LNCYQYW 186
C W
Sbjct: 258 NECGNRW 264
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E +++++ + YK + R + N D KN R+ VL G V PE + MTA+
Sbjct: 161 ELGAQIEECIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAE 220
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 221 EMASDELKEMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMT 280
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 281 TFVFCNQCGNRW 292
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 18 KCNDCIREIVRKNLYGALSKVSIEAAHDKNVI-DQVKACNPIQVAISMESAMYEKWGRSS 76
+ ++ +R V++ L L +A KNV D VK +V+ +E +Y+ + +
Sbjct: 1261 QASESVRVNVKRTLLDVLLTRVKKAPDVKNVTADDVK-----RVSKQVEFELYKLFNDTG 1315
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
YK KYR L+FN D KN + +L G++ P +V M++ ++AS ++ W E K
Sbjct: 1316 AKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMKWREQEAK 1373
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 40 IEAAHDKNVIDQVKACNPIQVAIS----MESAMYEKWGRSSETYKFKYRRLLFNFNDPKN 95
IE +D V D + P+++ +S +E ++ G ++ YK K R L N D N
Sbjct: 139 IELVYDALVND---SSAPVELILSRARGVEKCVHHDNGGTTAAYKQKIRSLFVNLKDKNN 195
Query: 96 HEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY 155
FR+ V+ GDV E + MT+++MAS++ + RK + E +F L + +
Sbjct: 196 PGFRENVISGDVPVEKLAKMTSEDMASEERKAA---DRKIKEEN---LFKSLSAAEQAAE 249
Query: 156 ------GICKCSRC----GHKRMSFIPLRRHITCLNCYQYW 186
G CK +C R + P+ +TC NC W
Sbjct: 250 TDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRW 290
>gi|268532566|ref|XP_002631411.1| Hypothetical protein CBG03263 [Caenorhabditis briggsae]
Length = 305
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ +E +Y +++ Y R +FN D KN R+ VL G V+ E M
Sbjct: 168 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 227
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-------- 166
T++EMAS +++ E +++ E + G +P ++ KC +CG K
Sbjct: 228 TSEEMASPEIREMREKFTKEAILEHQVSVQQG--TPSDMF----KCGKCGKKNCTYTQLQ 281
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R S P+ + CL C W
Sbjct: 282 TRSSDEPMTTFVFCLECGNRW 302
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 23/161 (14%)
Query: 40 IEAAHDKNVIDQVKACNPIQVAIS----MESAMYEKWGRSSETYKFKYRRLLFNFNDPKN 95
IE +D V D + P+++ +S +E ++ G ++ YK K R L N D N
Sbjct: 139 IELVYDALVND---SSAPVELILSRARGVEKCVHHDNGGTTAAYKQKIRSLFVNLKDKNN 195
Query: 96 HEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY 155
FR+ V+ GDV E + MT+++MAS++ + RK + E +F L + +
Sbjct: 196 PGFRENVISGDVPVEKLAKMTSEDMASEERKAA---DRKIKEEN---LFKSLSAAEQAAE 249
Query: 156 ------GICKCSRC----GHKRMSFIPLRRHITCLNCYQYW 186
G CK +C R + P+ +TC NC W
Sbjct: 250 TDAFQCGRCKQRQCRYRQAQTRSADEPMTTFVTCTNCGNRW 290
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 57.8 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
N+ +R+ +R++L L K ++ K +V ++A ++E M+ + Y
Sbjct: 639 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG-----RLAFAIEKEMFNLCLNTDSKY 693
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
K KYR L+FN DPKN +V+ GDV P +V ++A+E+ S +M W
Sbjct: 694 KNKYRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKEMSEW 742
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + AHD I + +++ +E ++ G + YK
Sbjct: 112 DAVRNKCREMLTAAL-----QTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYK 162
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D +N + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 163 NRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 222
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 223 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 272
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 26/190 (13%)
Query: 6 FSTNVPKASKV-----VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQV 60
F T+ P+A +KC RE++ L ++I A D ++
Sbjct: 129 FITSFPRAPSTSDSVRIKC----RELLATALKTGDDHIAIGADVD-------------EL 171
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
+E A+++++ + YK + R + N D KN R+ VL G++ P+ M+A+EM
Sbjct: 172 GAQIEEAVFQEFKNTEAKYKNRIRSRIANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEM 231
Query: 121 ASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRH 176
ASD+++ +N K + +G G CK C + R + P+
Sbjct: 232 ASDELKEMRKNLTKEAIREHQMARTGGTETDLFTCGKCKKKNCTYTQVQTRSADEPMTTF 291
Query: 177 ITCLNCYQYW 186
+ C C W
Sbjct: 292 VFCNECGNRW 301
>gi|37359898|dbj|BAC97927.1| mKIAA0333 protein [Mus musculus]
Length = 1201
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 685 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 742
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 743 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 802
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Query: 25 EIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYR 84
E VR ALS V ++ + +D V+ + A ++E ++ + + YK KYR
Sbjct: 227 ENVRTTTVQALSDVLLKRVKEAPDLD-VQEETLLNAAKNIEQEIFALFYHTDARYKKKYR 285
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
+LFN DP N ++++LG++ P+ + ++++ EMA D++ W +K
Sbjct: 286 SILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGDELTNWRNEEKK 335
>gi|388583993|gb|EIM24294.1| transcription elongation factor [Wallemia sebi CBS 633.66]
Length = 282
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYEKW-GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
++ A+S+ES + + G + E YK K R L+ N D KN R+ V+ GD T M+
Sbjct: 146 MERALSIESTVLDDNNGSTGEEYKKKVRSLMLNLKDKKNPSLREAVISGDTPAATFCRMS 205
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
+ +MAS+ E ++ RA +F P+ KC RC ++ ++
Sbjct: 206 SADMASE------ERKQQDRALELSNLFKARGAGPQQAETDSFKCGRCKQRKCTYYQMQT 259
Query: 172 -----PLRRHITCLNCYQYW 186
P+ +TC C W
Sbjct: 260 RSADEPMTTFVTCTVCNNRW 279
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + AHD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTAHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D +N + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|51571541|ref|NP_808520.2| death-inducer obliterator 1 isoform 2 [Mus musculus]
gi|187951163|gb|AAI38714.1| Death inducer-obliterator 1 [Mus musculus]
gi|187952021|gb|AAI38713.1| Death inducer-obliterator 1 [Mus musculus]
Length = 1183
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 784
>gi|17536493|ref|NP_495941.1| Protein T24H10.1 [Caenorhabditis elegans]
gi|1729914|sp|P52652.1|TFS2_CAEEL RecName: Full=Putative transcription elongation factor S-II;
AltName: Full=TFIIS
gi|3880168|emb|CAA90943.1| Protein T24H10.1 [Caenorhabditis elegans]
Length = 308
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ +E +Y ++++Y R +FN D KN R+ VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKSYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-------- 166
T++EMAS +++ + +++ E + G S + KC +CG K
Sbjct: 231 TSEEMASAEIREMRDKFTKEAILEHQMSVQQGTPS------DMFKCGKCGKKNCTYTQLQ 284
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R S P+ + CL C W
Sbjct: 285 TRSSDEPMTTFVFCLECGNRW 305
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
A ++E+A + G + E Y+ K R L N + N R +VL GDV PE V M+ E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGDVTPERFVRMSHDE 230
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
+ S++ Q E R+ + E + + + + +C +CG +++++
Sbjct: 231 LRSEEQQ---ERDRRIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSAD 285
Query: 172 -PLRRHITCLNCYQYW 186
P+ TC+NC + W
Sbjct: 286 EPMTLFCTCMNCGKSW 301
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR +RK L LS I+ D + D+ A +A ++E MY+ + + YK K
Sbjct: 137 IRVNIRKTLTELLSS-RIKETEDLKLTDEEIA----DLAFNIELEMYKYFKDTGSKYKAK 191
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P+ +V ++ EMAS ++ W E K + E
Sbjct: 192 YRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 247
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I C +A +E ++ G + YK
Sbjct: 173 DAVRTKCREMLTAAL-----QTDHDHVAIGADCEC----LAGQIEECIFRDVGNTDMKYK 223
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R L N D KN R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 224 NRVRSRLSNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 283
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 284 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 333
>gi|344306328|ref|XP_003421840.1| PREDICTED: death-inducer obliterator 1 [Loxodonta africana]
Length = 2247
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + D + D + N + +VA+ +E M+ + + YK KYR
Sbjct: 676 IRQNIRRSLKEILWKRVSDSD--DLIMTENEVGRVALRIEKEMFSLFQVTDNRYKSKYRS 733
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V M +E+AS ++ W E K E ++
Sbjct: 734 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELASKELSTWKERPAKPVMEARTKL 791
>gi|332030327|gb|EGI70070.1| Death-inducer obliterator 1 [Acromyrmex echinatior]
Length = 2282
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR +RK+L LS I+ D + D+ A +A ++E MY+ + + YK K
Sbjct: 1263 IRVNIRKSLTELLSS-RIKETKDLKLTDEEIA----DLAFNIEFEMYKYFKDTGSKYKAK 1317
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P+ +V ++ EMAS ++ W E K + E
Sbjct: 1318 YRSLVFNIKDTKNLTLFRKIADHSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 1373
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 69/170 (40%), Gaps = 12/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I C Q+ E ++ G + YK
Sbjct: 122 DAVRTKCREMLTAAL-----QTDHDHVAIGADCECLAGQIE---EYILFRDVGNTDMKYK 173
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R L N D KN R+KVL G + P+ I MT++EMASD+++ + K +
Sbjct: 174 NRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 233
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 234 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 283
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
A ++E+A + G + E Y+ K R L N + N R +VL GDV PE V M+ E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGDVTPEQFVRMSHDE 230
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
+ S + Q E RK + E + + + + +C +CG +++++
Sbjct: 231 LRSAEQQ---ERDRKIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSAD 285
Query: 172 -PLRRHITCLNCYQYW 186
P+ TC+NC + W
Sbjct: 286 EPMTLFCTCMNCGKSW 301
>gi|307187162|gb|EFN72405.1| Death-inducer obliterator 1 [Camponotus floridanus]
Length = 2322
Score = 57.4 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR +RK L LS I+ D + D+ A +A ++E MY+ + + YK K
Sbjct: 1305 IRLNIRKTLTELLSS-RIKETEDLKLTDEEIA----DLAFNIELEMYKYFKDTGSKYKAK 1359
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P+ +V ++ EMAS ++ W E K + E
Sbjct: 1360 YRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 1415
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A +E +++ +S YK + R +FN D KN R+ VL G ++P M
Sbjct: 159 SPEELADLIEESIFSSNKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIEPSKFAVM 218
Query: 116 TAKEMASDKMQLWYENSRKGRAE--TNGRIFSGLVSPKNIVYGICKCSRCG--------- 164
TA EMASD++ +K RA G S L + + KC +CG
Sbjct: 219 TADEMASDEV-------KKQRAAFVKQGIDASQLAQIQGTKTDLLKCGKCGKSDCTYNQI 271
Query: 165 HKRMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 272 QTRSADEPMTTFVLCNACGNRW 293
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 58 IQVAISMESAMYEKWGRSS-----ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
+ +A +E ++Y ++ S+ E+Y K R +LFN +DPKN + R ++ G+++PE +
Sbjct: 1 MDLACRIEQSIYNQFPFSTKFNLKESYNAKLRNILFNLSDPKNPDLRNRIFSGELEPERL 60
Query: 113 VNMTAKEMASDKMQLW 128
MT EMAS +M+ W
Sbjct: 61 PIMTNDEMASSEMRKW 76
>gi|403293239|ref|XP_003937628.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Saimiri boliviensis boliviensis]
Length = 1200
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ + YK KYR LLFN DP+N + +V+ GDV P +V M++ +
Sbjct: 637 IAAGIEAALWDLTQGTDGRYKAKYRSLLFNLRDPRNLDLFLRVVHGDVNPYDLVRMSSMQ 696
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 697 LAPQELARWRDQEEK 711
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR +RK+L LS I+ D + D+ A +A ++E MY+ + + YK K
Sbjct: 1315 IRLNIRKSLTELLSS-RIKETEDLKLTDEEIA----DLAFNIELEMYKYFKDTGAKYKAK 1369
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P+ +V ++ EMAS ++ W E K + E
Sbjct: 1370 YRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 1425
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + H Q + +A +E +Y+++ + YK
Sbjct: 137 DSVRTKCRELLVAALQ---TDGDH------QTIGADCEHMAAQIEDYIYQEFKSTDMKYK 187
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSRKG 135
+ R + N D KN + R+ VL G++ PE I +MTA+EMAS +++ L E+ R+
Sbjct: 188 TRLRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREH 247
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+ G + + V G CK C + R + P+ + C C W
Sbjct: 248 QLSKVGGTETDM-----FVCGKCKGKNCTYTQVQTRSADEPMTTFVLCNECGNRW 297
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 19/138 (13%)
Query: 9 NVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKA-------CNPIQVA 61
++P A V +D +R VR+ L AL + +D++KA +P VA
Sbjct: 394 SLPSAGSVGN-DDEVRSKVREQLASALQRA----------LDELKAEGYTEALPDPAAVA 442
Query: 62 ISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
+E+ +Y+ S S+ YK K+R L FN D N E R +VL G++ P +V + E+
Sbjct: 443 ADVETELYKLHDNSVSKDYKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAEL 502
Query: 121 ASDKMQLWYENSRKGRAE 138
A ++ W + ++ A+
Sbjct: 503 ARKELSEWRQKRQEEAAK 520
>gi|395829525|ref|XP_003787906.1| PREDICTED: death-inducer obliterator 1 [Otolemur garnettii]
Length = 2230
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 62/120 (51%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 673 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 730
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ W E + E+ ++ S
Sbjct: 731 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWKERPARSVMESRTKLHS 790
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG----HKRMSFIPLR 174
EMASD+++ +N K + +G G CK C R + P+
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 214 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|241948245|ref|XP_002416845.1| DNA strand transfer protein alpha, putative; dna strand transferase
1, putative; pyrimidine pathway regulatory protein 2,
putative; transcription elongation factor SII, putative
[Candida dubliniensis CD36]
gi|223640183|emb|CAX44432.1| DNA strand transfer protein alpha, putative [Candida dubliniensis
CD36]
Length = 303
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+++AI +ES +Y+ ++ + S++Y+ K R N + KN E R+++L + P + M+
Sbjct: 167 LRIAIEIESEVYKNEYSKISDSYRNKLRSFTMNLRNKKNPELRERILSKQILPAEFIKMS 226
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 227 PNEMAPEALKKEIEKLHKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 280
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 281 RSADEPLTTFCTCENCGNRW 300
>gi|198419645|ref|XP_002120544.1| PREDICTED: similar to transcription elongation factor A (SII) 1
[Ciona intestinalis]
Length = 298
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A ++E A+Y ++ + YK + R N D +N R VL G +KPE I MTA+E
Sbjct: 165 LAAAIEEAIYSEFKDTGVKYKNRIRSRFSNLKDTRNSILRLNVLNGILKPEQIAKMTAEE 224
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRR 175
MASD+M+ E + + + + V G CK C + R + P+
Sbjct: 225 MASDEMKKKREEYEQQNIKDHQMSVNEGTKTDMFVCGRCKGRACTYNQLQTRSADEPMTT 284
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 285 FVFCTECGNRW 295
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 57.0 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 25 EIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYR 84
E +R+++ +L + + + ++ V+ + +VA E ++ + + YK KYR
Sbjct: 625 EAIRRSVRDSLKDILTQRLKESDLHISVERAS--EVAKKTERELFHLFKDTDHKYKNKYR 682
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
L+FN D KN+ K+VL G++ P ++ M+ +E+AS ++ W + + E
Sbjct: 683 SLIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAWRQRENRHTIE 736
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A++++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 170 ELGSQIEEAIFQELKNTDMKYKNRVRSRIANLKDTKNPNLRKNVLCGNILPDRFAKMTAE 229
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 230 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMT 289
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 290 TFVVCNECGNRW 301
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E+ +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 213 KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 272
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 273 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 322
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 323 QTRSADEPMTTFVLCNECGNRW 344
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E +++++ + YK + R + N D KN R+ VL G + PE + MTA+
Sbjct: 177 ELGAQIEDFIFQEFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAE 236
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 237 EMASDELKEIRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMT 296
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 297 TFVFCNGCGNRW 308
>gi|68486327|ref|XP_712962.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|68486518|ref|XP_712868.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434285|gb|EAK93699.1| hypothetical protein CaO19.12012 [Candida albicans SC5314]
gi|46434386|gb|EAK93797.1| hypothetical protein CaO19.4537 [Candida albicans SC5314]
gi|238879330|gb|EEQ42968.1| hypothetical protein CAWG_01194 [Candida albicans WO-1]
Length = 305
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+++AI +E+ +Y+ ++ + S++Y+ + R N + KN E R+++L + P + MT
Sbjct: 169 LRIAIEIEAEVYKSEYSKVSDSYRNRLRSFTMNLRNKKNPELRERILSKQILPAAFIKMT 228
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 229 PNEMAPEALKKEIEKLHKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 282
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 283 RSADEPLTTFCTCENCGNRW 302
>gi|425778300|gb|EKV16434.1| hypothetical protein PDIP_35810 [Penicillium digitatum Pd1]
gi|425780677|gb|EKV18681.1| hypothetical protein PDIG_07750 [Penicillium digitatum PHI26]
Length = 880
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYE----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E AMYE + G +E+YK + R ++FN KN R ++++G + P+ +
Sbjct: 368 QLALSIEDAMYESICGRSGEPNESYKAQLRSIMFNVK--KNASLRDRLIIGSLSPKLLSQ 425
Query: 115 MTAKEMASDKMQ 126
MT EMAS+++Q
Sbjct: 426 MTTAEMASEELQ 437
>gi|195055893|ref|XP_001994847.1| GH13879 [Drosophila grimshawi]
gi|193892610|gb|EDV91476.1| GH13879 [Drosophila grimshawi]
Length = 2061
Score = 57.0 bits (136), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 64 MESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+ES MY +GR YK KYR L+FN D KN +K+ V+P+ +V MT E+AS
Sbjct: 1339 VESEMYHSFGRDVGAKYKSKYRSLIFNIRDRKNKTLFEKICAKQVEPKQLVRMTPSELAS 1398
Query: 123 DKMQLWYENSRK 134
++ W E +
Sbjct: 1399 QELAKWREEENR 1410
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
N+ +R+ +R++L L K ++ K +V ++A+++E M+ + Y
Sbjct: 658 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVG-----RLAVAIEKEMFNLCLSTDSKY 712
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAET 139
K KYR L+FN DPKN +V+ G+V P +V ++A+E+ S ++ W + +
Sbjct: 713 KNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEISEWRKPDAPEAQSS 772
Query: 140 NGRIFSG 146
+ R SG
Sbjct: 773 SSRTHSG 779
>gi|403282553|ref|XP_003932709.1| PREDICTED: death-inducer obliterator 1 [Saimiri boliviensis
boliviensis]
Length = 2234
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 669 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFHVTDNRYKSKYRS 726
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ W E + E ++ S
Sbjct: 727 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWKEKPARSVMEPRTKVHS 786
>gi|291224586|ref|XP_002732285.1| PREDICTED: PHD finger protein 3-like [Saccoglossus kowalevskii]
Length = 1741
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
VR N+ L + I A + I ++++ +V +E +++ + +S YK KYR L
Sbjct: 789 VRHNVRKTLKEQMIGRARESRGI-KLRSEEIEKVVNRIEHELFKLYQDTSSKYKAKYRTL 847
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
+FN D N ++VL GD+ P +V MT+++MA ++ W E K E
Sbjct: 848 MFNLKDVNNKGLFRRVLKGDISPSKLVGMTSEQMACKELFEWREREAKHTLE 899
>gi|169780530|ref|XP_001824729.1| transcription elongation factor S-II [Aspergillus oryzae RIB40]
gi|238505302|ref|XP_002383880.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|83773469|dbj|BAE63596.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220689994|gb|EED46344.1| transcription elongation factor S-II [Aspergillus flavus NRRL3357]
gi|391872022|gb|EIT81165.1| transcription elongation factor TFIIS/Cofactor of enhancer-binding
protein [Aspergillus oryzae 3.042]
Length = 304
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 56 NPIQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
N + A ++E+A Y+ G + E Y+ K R L N + N R +VL DV P+ V
Sbjct: 167 NVLSKASAVEAAAYKSLGPETKEQYRTKIRSLFQNLKNKSNPSLRIRVLSNDVTPDQFVR 226
Query: 115 MTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
M+ E+ SD+ + E K + E + + + + +C +CG +++++
Sbjct: 227 MSHDELRSDEQR---EKDAKIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQ 281
Query: 172 ------PLRRHITCLNCYQYW 186
P+ TCLNC + W
Sbjct: 282 TRSADEPMTLFCTCLNCGKSW 302
>gi|121705046|ref|XP_001270786.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
gi|119398932|gb|EAW09360.1| transcription elongation factor S-II [Aspergillus clavatus NRRL 1]
Length = 304
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
A ++E+A + G + E Y+ K R L N + N R +VL DV PE V MT E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRTRVLANDVTPEQFVKMTYDE 231
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
+ S + + E RK + E + + + + +C +CG +++++
Sbjct: 232 LKSAEQR---EQDRKIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSAD 286
Query: 172 -PLRRHITCLNCYQYW 186
P+ TC+NC + W
Sbjct: 287 EPMTLFCTCMNCGKSW 302
>gi|448079285|ref|XP_004194362.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359375784|emb|CCE86366.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 30 NLYGALSK-VSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRS-SETYKFKYRRL 86
N+Y L++ S+ A + I++ + I VA +E+ +Y S S++Y+ K R
Sbjct: 130 NIYENLTRNASVSALYTALAIERDDSSEHIVAVAKDIENEVYRSEKLSISDSYRTKLRTF 189
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA-ETNGRIFS 145
N + KN + R ++L G + PE + M+ +MA + ++ E K E G
Sbjct: 190 TMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEALKKEIEKLHKQNLFEAQG---- 245
Query: 146 GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ K V C +C HKR+S+ PL TC NC W
Sbjct: 246 --ATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRW 293
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 56.6 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 60 VAISMESAMYEKWGRS--SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+A ++E A+Y+K RS S+ Y+ YR + FN +DP+N R++VL G++ P+ +V +
Sbjct: 349 LASNIEGALYDKHERSIKSKAYRAAYRMVNFNLSDPQNASLRRRVLTGEMSPQHLVTASH 408
Query: 118 KEMASDKMQ 126
E+ SD ++
Sbjct: 409 DELGSDSLK 417
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 20/144 (13%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P A +E A+Y + YK + R L N DPKN R+K L+G + P+ + M
Sbjct: 7 DPHDKAAQLEDAIYGELSSCQVKYKNRIRSRLANLRDPKNPGLREKFLVGLITPQELSRM 66
Query: 116 TAKEMASDKM----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG------- 164
T +EMASD + Q + ++S N + K + KC RC
Sbjct: 67 TPEEMASDDLKQMRQQYVQDS------INAAQLGNVEGTKTNQF---KCERCQKRNCTQL 117
Query: 165 HKRMSFIPLRRHITCLNCYQYWAS 188
H R P+ + C +C W S
Sbjct: 118 HIRDGDEPIITFVMCDDCGNRWKS 141
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 158 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 217
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 218 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 267
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 268 QTRSADAPMTTFVLCNECGNRW 289
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 213 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 272
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 273 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 322
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 323 QTRSADEPMTTFVLCNECGNRW 344
>gi|448083875|ref|XP_004195463.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
gi|359376885|emb|CCE85268.1| Piso0_004850 [Millerozyma farinosa CBS 7064]
Length = 296
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 75/170 (44%), Gaps = 19/170 (11%)
Query: 30 NLYGALSK-VSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRS-SETYKFKYRRL 86
N+Y L++ S+ A + I++ + I VA +E+ +Y S S++Y+ K R
Sbjct: 130 NIYENLTRNASVSALYTALAIERDDSSEHIVAVAKDIENEVYRSEKLSISDSYRTKLRTF 189
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA-ETNGRIFS 145
N + KN + R ++L G + PE + M+ +MA + ++ E K E G
Sbjct: 190 TMNLRNKKNPDLRDRLLSGKISPEAFIKMSPNDMAPEALKKEIEKLHKQNLFEAQG---- 245
Query: 146 GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ K V C +C HKR+S+ PL TC NC W
Sbjct: 246 --ATEKRAVTDRFTCGKCKHKRVSYYQMQTRSADEPLTTFCTCENCGNRW 293
>gi|281352337|gb|EFB27921.1| hypothetical protein PANDA_015330 [Ailuropoda melanoleuca]
Length = 2163
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 11 PKASKVVKCNDCIREI---VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMES 66
P ++V N + + +R+N+ +L ++ + +D + D + + + ++A+ +E
Sbjct: 649 PAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSD--DLIMTESEVGKIALHIEK 706
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M++ + + YK KYR ++FN DPKN +VL ++ +V M +E+ S ++
Sbjct: 707 EMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELS 766
Query: 127 LWYENSRKGRAETNGRIFS 145
W E + E+ ++ S
Sbjct: 767 TWRERPTRPVMESRNKLHS 785
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK K R+L FN DPKN + R+ V G + P+ ++++ +E+ SD+ + EN+ A
Sbjct: 1 YKAKVRQLSFNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERR--NENAAIREAA 58
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
T + + KC +CG ++ ++ P+ +TC+NC W
Sbjct: 59 TAEAVRGQKQQASTDAF---KCGKCGQRKCTYYQLQTRSADEPMTTFVTCVNCDNRW 112
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQ----VAISMESAMYEKWG--- 73
D I E VRK+ AL + + K +P Q +A+++E +Y+ +G
Sbjct: 196 DDITEKVRKSAASALKGIFVSVPTSK--YSPGAGVSPEQFCETLALTIEQELYDAYGTVE 253
Query: 74 -RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENS 132
Y+ K+R L FN D KN R +V+ G V P+T+V M+++EM + ++Q E
Sbjct: 254 PEIGSNYRDKFRTLSFNLRDSKNETLRIRVMTGQVTPQTLVAMSSEEMMNPELQKLAEEV 313
Query: 133 R 133
R
Sbjct: 314 R 314
>gi|301780734|ref|XP_002925785.1| PREDICTED: death-inducer obliterator 1-like [Ailuropoda
melanoleuca]
Length = 2165
Score = 56.6 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 11 PKASKVVKCNDCIREI---VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMES 66
P ++V N + + +R+N+ +L ++ + +D + D + + + ++A+ +E
Sbjct: 649 PAPGRLVTSNPALSQPNSQIRQNIRRSLKEILWKRVNDSD--DLIMTESEVGKIALHIEK 706
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M++ + + YK KYR ++FN DPKN +VL ++ +V M +E+ S ++
Sbjct: 707 EMFQLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELS 766
Query: 127 LWYENSRKGRAETNGRIFS 145
W E + E+ ++ S
Sbjct: 767 TWRERPTRPVMESRNKLHS 785
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 213 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 272
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 273 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 322
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 323 QTRSADEPMTTFVLCNECGNRW 344
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY-EKWGRSSET 78
+D R LY AL+ IE I + VA S+E+ ++ +++ + ++
Sbjct: 123 DDSTRNASISALYTALA---IERGDSSQQI--------LSVAKSIEAEVFKDEYSKVADG 171
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
Y+ K R + N + KN E R ++L G + P V M+ EMA + ++ E K
Sbjct: 172 YRNKLRTFVMNLRNKKNPELRDRILSGQITPGKFVKMSPNEMAPETLKKEIEKLHKQN-- 229
Query: 139 TNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+F + K V C +C HK++S+ PL TC NC W
Sbjct: 230 ----LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 283
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 14/136 (10%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
VA +E+A Y G ++ YK K R L N N RK+VL+G+V + V MT E
Sbjct: 173 VAKQVEAAAYTNAGSVNDAYKAKMRSLFQNLKSKSNPALRKRVLIGEVPAKRFVVMTHDE 232
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
M SD+ + E K +AE V + + +CS+C K +S+
Sbjct: 233 MKSDERRALDE---KLKAENMNEAMVAQV--EKAISKEFQCSKCKKKMVSYSQAQTRSAD 287
Query: 172 -PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 288 EPMTTFCECMNCGNRW 303
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYE----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+S+E AMYE + G +E YK + R ++FN KN R ++L+G + P+ +
Sbjct: 372 QLALSIEDAMYESICGRTGEPNEAYKAQLRSIMFNVK--KNASLRDRLLIGSLSPKLLSQ 429
Query: 115 MTAKEMASDKMQ 126
MT EMAS ++Q
Sbjct: 430 MTTAEMASKELQ 441
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R+ R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 143 DAVRDKCREMLTAAL-----QTDHDHVAI----GADCKRLSAQIEECIFRDVGNTDMKYK 193
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 194 NRVRSRISNLKDAKNPDLRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKEAIREH 253
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 254 QMARTGGTQTDLFTCGKCRKKSCTYTQVQTRSSDEPMTTFVVCNECGNRW 303
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 4/128 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ E A+ + G + YK + + + N D KN + RK G++ P+ + MTA+
Sbjct: 26 ELGSRTEEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAE 85
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----PLR 174
EMASD+++ ++N RK + +G P ++ CK C ++ P+
Sbjct: 86 EMASDELKEMHKNLRKEAIREHQMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMT 145
Query: 175 RHITCLNC 182
+ C C
Sbjct: 146 TFVDCNEC 153
>gi|195110799|ref|XP_001999967.1| GI24826 [Drosophila mojavensis]
gi|193916561|gb|EDW15428.1| GI24826 [Drosophila mojavensis]
Length = 2080
Score = 56.2 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 64 MESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+ES MY +G+ S YK KYR L+FN D KN +K+ V+P+ +V MT E+AS
Sbjct: 1366 VESEMYNSFGQDVSAKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPAELAS 1425
Query: 123 DKMQLWYENSRK 134
++ W E +
Sbjct: 1426 QELAKWREEENR 1437
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 56.2 bits (134), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 213 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 272
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 273 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 322
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 323 QTRSADEPMTTFVLCNECGNRW 344
>gi|345487114|ref|XP_003425625.1| PREDICTED: hypothetical protein LOC100679883 isoform 2 [Nasonia
vitripennis]
Length = 2039
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR VRK L L+ ++ A+D + ++ + ++A+ +E M++ + + + YK K
Sbjct: 1305 IRLTVRKTLAELLTS-RVKEANDLAITEEEIS----ELALQIELEMFKFFKDTGQKYKSK 1359
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P +V ++ EMAS ++ W E K + E
Sbjct: 1360 YRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLE 1415
>gi|260949205|ref|XP_002618899.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
gi|238846471|gb|EEQ35935.1| hypothetical protein CLUG_00058 [Clavispora lusitaniae ATCC 42720]
Length = 309
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 28/167 (16%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE-KWGRSSETYKFKYRRLLFN 89
LY AL+ IE D I +++A +ES +++ ++ ++ Y+ + R N
Sbjct: 157 LYTALA---IERDDDSKTI--------LRIATEIESEVFKSEYSNVNDNYRNRLRTFTMN 205
Query: 90 FNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGL-V 148
+ KN E R ++L G + P + + MT EMA + ++ E K +F
Sbjct: 206 LRNKKNPELRARLLSGQITPSSFIKMTPNEMAPEALKKEIEKLHKQN------LFDAQGA 259
Query: 149 SPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ K V C +C HK++S+ PL TC NC W
Sbjct: 260 TEKRAVTDRFTCGKCKHKKVSYYQMQTRSADEPLTTFCTCENCGNRW 306
>gi|345487112|ref|XP_003425624.1| PREDICTED: hypothetical protein LOC100679883 isoform 1 [Nasonia
vitripennis]
Length = 2181
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR VRK L L+ ++ A+D + ++ + ++A+ +E M++ + + + YK K
Sbjct: 1298 IRLTVRKTLAELLTS-RVKEANDLAITEEEIS----ELALQIELEMFKFFKDTGQKYKSK 1352
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P +V ++ EMAS ++ W E K + E
Sbjct: 1353 YRSLVFNIKDTKNLTLFRKIADRSLSPAAVVKLSPDEMASQELAEWREKENKHQLE 1408
>gi|186522138|ref|NP_196704.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|332004296|gb|AED91679.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 873
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +Y+ +G ++ Y+ + R LLFN D N E R++V+ ++ E + +M
Sbjct: 260 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 319
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRI 143
TA+E+AS ++ W R+ +AE ++
Sbjct: 320 TAEELASKELSQW----RQAKAEEMAKM 343
>gi|7573400|emb|CAB87703.1| putative protein [Arabidopsis thaliana]
Length = 871
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +Y+ +G ++ Y+ + R LLFN D N E R++V+ ++ E + +M
Sbjct: 258 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPELRERVMSEEISAERLCSM 317
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRI 143
TA+E+AS ++ W R+ +AE ++
Sbjct: 318 TAEELASKELSQW----RQAKAEEMAKM 341
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 4/122 (3%)
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E A+ + G + YK + + + N D KN + RK G++ P+ + MTA+EMASD+
Sbjct: 113 EEAIDPERGNTGMKYKNRVQSKISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDE 172
Query: 125 MQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----PLRRHITCL 180
++ ++N RK + +G P ++ CK C ++ P+ + C
Sbjct: 173 LKEMHKNLRKEAIREHQMAKTGGTQPDSLTCAKCKKKNCTSTQVQACSAGEPMTTFVDCN 232
Query: 181 NC 182
C
Sbjct: 233 EC 234
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++AI +E A+Y ++ + YK + R + N DPKN R + G + + + MT
Sbjct: 190 PEEMAIELEEAIYAEFRNTDMKYKNRVRSRVANLKDPKNPTLRGNFMCGAITAQQLAKMT 249
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC +C + R
Sbjct: 250 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 304
Query: 168 MSFIPLRRHITCLNCYQYW 186
S P+ + C C W
Sbjct: 305 SSDEPMTTFVMCNECGHRW 323
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ +E +Y +++ Y R +FN D KN R+ VL G V+ E M
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-------- 166
T++EMAS +++ + +++ E + G S + KC +CG K
Sbjct: 231 TSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTPS------DMFKCGKCGKKNCTYTQLQ 284
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R S P+ + CL C W
Sbjct: 285 TRSSDEPMTTFVFCLECGNRW 305
>gi|301628193|ref|XP_002943242.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 2281
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR+ +R++L L K I++ V ++V ++A ++E M+ + + YK K
Sbjct: 702 IRQNIRRSLKQILWKRVIDSDDLVMVENEVA-----RIATNIEREMFNLYRDTDSRYKAK 756
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKG 135
YR ++FN DPKN +VL ++ +V + +E+AS K+ W E SR G
Sbjct: 757 YRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSG 810
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
VA +E+A Y G ++ YK K R L N N RK+VL G+V + V MT E
Sbjct: 173 VAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDE 232
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
M SD+ + E K +AE V + + +CS+C K +S+
Sbjct: 233 MKSDERRALDE---KLKAENMNEAMVAQV--EKAISKEFQCSKCKKKMVSYSQAQTRSAD 287
Query: 172 -PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 288 EPMTTFCECMNCGNRW 303
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCQRLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|301628195|ref|XP_002943243.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 2209
Score = 56.2 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR+ +R++L L K I++ V ++V ++A ++E M+ + + YK K
Sbjct: 630 IRQNIRRSLKQILWKRVIDSDDLVMVENEVA-----RIATNIEREMFNLYRDTDSRYKAK 684
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKG 135
YR ++FN DPKN +VL ++ +V + +E+AS K+ W E SR G
Sbjct: 685 YRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSG 738
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 109 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYK 159
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 160 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 219
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 220 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 269
>gi|156040461|ref|XP_001587217.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum
1980]
gi|154696303|gb|EDN96041.1| transcription elongation factor s-ii [Sclerotinia sclerotiorum 1980
UF-70]
Length = 301
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+++E A ++ +G ++ YK K R L N N + RK+V+ GD++P V MT +E+
Sbjct: 169 AMAVEQAAFDHFGGETKDYKEKLRSLFQNLKQVSNTQLRKRVMSGDIEPARFVVMTHEEL 228
Query: 121 ASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
S++M+ L EN +K + + S ++ C +C K++S+
Sbjct: 229 KSEEMKKKDDLLEMENMKKAQVPMAEKSISDALT----------CGKCHQKKVSYSQAQT 278
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 279 RSADEPMTTFCECQVCGHRW 298
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EM SD+++ +N K + +G G CK C + R + P+
Sbjct: 227 EMPSDELKEMRKNLTKEAIREHQMSKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 286
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 287 TFVVCNECGNRW 298
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD + C + I E ++ G + YK
Sbjct: 145 DAVRNKCRELLTAAL-----QTDHDHMAVGA--DCEGLSAQI--EECIFRDVGNTDMKYK 195
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 196 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 255
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G CK C + R S P+ + C C W
Sbjct: 256 QMARTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 305
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +Y+ + YK + R + N D KN E +K VL G + PE I MT++E
Sbjct: 141 IAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEE 200
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + +G G CK C + R S P+
Sbjct: 201 MASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTT 260
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 261 FVVCNECGNRW 271
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E +++ + + YK + R + N D KN R+ VL G + PE + MTA+
Sbjct: 177 ELGAQIEDFIFQVFKNTDMKYKNRVRSRISNLKDVKNPNLRRTVLCGSITPERMAKMTAE 236
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 237 EMASDELKEIRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKNCTYTQVQTRSADEPMT 296
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 297 TFVFCSGCGNRW 308
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E +++++ + YK + R + N D KN R+ VL G V PE + M+A+
Sbjct: 176 ELGAQIEEVIFQEFKNTDMKYKNRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAE 235
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 236 EMASDELREMRKNLTKEAVRDHQMATTGGTQTDLFTCGKCKGKCCTYTQVQTRSADEPMT 295
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 296 TFVFCNECGNRW 307
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 55.8 bits (133), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAA--HDKNVIDQVKACNPIQVAISMESAMYEKWGRSSE 77
ND +R K LY +L ++ +A D + D A+++E+A+ G+ +
Sbjct: 152 NDKVRNACLKLLYNSL-EIGKDAHGWSDSQIFD---------AAVAVEAAILANQGKGAV 201
Query: 78 T--YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYE 130
T Y+ K R L N D N + R +V+ D+ +T+V M+ +E+ASDK QL +
Sbjct: 202 TTEYRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSNEELASDKRKREIEQLQMQ 261
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
N K + + + +C RC ++ + P+ +TC N
Sbjct: 262 NLFKAKG----------AAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTN 311
Query: 182 CYQYW 186
C W
Sbjct: 312 CNHKW 316
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A +E A++ + +S YK + R +FN D KN R+ VL G ++P M
Sbjct: 154 SPEELADLIEEAIFSNFKSTSAKYKNQIRSRVFNLKDKKNPALRENVLTGIIEPSKFAVM 213
Query: 116 TAKEMASDKMQLWYENSRKGRAE--TNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
TA EMAS+++ +K RA+ G S L + + KC +C +
Sbjct: 214 TADEMASNEV-------KKQRADFVKQGIDASQLAQIQGTKTDLLKCGKCLKRNCTYNQI 266
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 267 QTRSADEPMTTFVLCNECGNRW 288
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 155 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPELIAKMTAE 214
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 215 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 264
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 265 QTRSADEPMTTFVLCNECGNRW 286
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +Y+ + YK + R + N D KN E +K VL G + PE I MT++E
Sbjct: 167 IAAQIEECIYQDIKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEE 226
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + +G G CK C + R S P+
Sbjct: 227 MASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTT 286
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 287 FVVCNECGNRW 297
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|40287880|gb|AAR84050.1| death inducer-obliterator-3 [Mus musculus]
Length = 2256
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + + + N + ++A+ +E M+ + + +K KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSDYL--IMTENEVGKIALHIEKEMFNLFQVTDNRFKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 784
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E ++ + + YK KYR
Sbjct: 669 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKELFNLFQVTDNRYKSKYRS 726
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGR 142
++FN DPKN +VL ++ +V M +E+ S ++ W E K E+ +
Sbjct: 727 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWRERPTKPAMESRNK 783
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
+++ +E ++ G + YK + R + N D KN E R+ VL G + P+ I MT++
Sbjct: 166 RLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPELRRNVLCGTITPQQIAVMTSE 225
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ + K + +G G C+ C + R S P+
Sbjct: 226 EMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMT 285
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 286 TFVVCNECGNRW 297
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAH-DKNVIDQVKACNPIQVAISMESAMYEKWGRSSET 78
D +R K LY AL + H D V D A+++E+A+ G+ S T
Sbjct: 154 QDKVRNACLKLLYQALEIGKEQHGHSDSQVFD---------AAVAVEAAILANQGKGSVT 204
Query: 79 --YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYEN 131
Y+ K R L N D N + R +V+ D+ + +V MT +E+ASDK +L +N
Sbjct: 205 ADYRNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTNEELASDKRKREIEELQMQN 264
Query: 132 SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNC 182
K + + + +C RC ++ + P+ +TC NC
Sbjct: 265 LFKAKG----------AAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTNC 314
Query: 183 YQYW 186
W
Sbjct: 315 NHKW 318
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
+ E YK K R L N + N + R++VL +V PE V MT +E+ SD+ + E K
Sbjct: 179 TKEQYKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSDERRALDEKIHK 238
Query: 135 GRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQY 185
+ + + + + +C +CG +++++ P+ TCLNC +
Sbjct: 239 ENMDK-----AMVAQAERSISSSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCLNCGKS 293
Query: 186 W 186
W
Sbjct: 294 W 294
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|225710958|gb|ACO11325.1| Transcription elongation factor S-II [Caligus rogercresseyi]
Length = 299
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 21/186 (11%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMY 69
VPK++ + +D +R R+ + AL + D V P + +E A++
Sbjct: 123 VPKSTNIGTTDD-VRLRCREMISNALKGTTDAGLPDGTVKP------PEEFGDLIEEAIF 175
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWY 129
+ +S YK + R +FN D KN R+ VL G + P MTA EMASD+++
Sbjct: 176 SNFKSTSAKYKNQIRSRVFNLRDKKNPALRENVLTGIIDPPKFAVMTADEMASDEIK--- 232
Query: 130 ENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCL 180
N R + G S L + + KC +C R + P+ + C
Sbjct: 233 -NQRAAFVK-QGIDASQLAHIQGTKTDLLKCGKCKQSNCTYNQIQTRSADEPMATFVLCN 290
Query: 181 NCYQYW 186
C W
Sbjct: 291 ECGNRW 296
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 29/151 (19%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
++V AC A ++E+ +Y+ + Y+ K R L N DPKN R V+ G +
Sbjct: 157 NEVLAC-----AKAIENEVYKMENGTGGNYRPKMRSLYINLKDPKNPGLRGNVISGKISA 211
Query: 110 ETIVNMTAKEMASDKMQLWYENSRK-----GRAETNGRIFSGLVSPKNIVYGICKCSRCG 164
E + M+ +EMASD+++ E K R T R + + C +C
Sbjct: 212 ERLCRMSPQEMASDELKKEIEEMEKQNLFAARGATEQRAVTDRFT----------CGKCK 261
Query: 165 HKRMSFI---------PLRRHITCLNCYQYW 186
K++S+ PL TC NC W
Sbjct: 262 QKKVSYYQMQTRSADEPLTTFCTCENCGTRW 292
>gi|328876868|gb|EGG25231.1| RNA polymerase II elongation factor [Dictyostelium fasciculatum]
Length = 325
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 49 IDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVK 108
+D++ + Q A+ +ES ++E +G ++ YK K R ++FN NH +K +L +
Sbjct: 184 MDEITELHYNQAAVEIESQLFETYGGANSDYKVKARSIIFNLKS--NHLLKKNILSKTLT 241
Query: 109 PETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH--- 165
M A EMA+ +++ E K E + + G CK +C +
Sbjct: 242 VTRFCTMDATEMANKELKEERERMLKYSREA-ATLSREAATTDQFQCGKCKQRKCTYFQL 300
Query: 166 -KRMSFIPLRRHITCLNCYQYW 186
R + PL +TC+NC W
Sbjct: 301 QTRSADEPLTTFVTCVNCNNRW 322
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +Y+ + YK + R + N D KN E +K VL G + PE I MT++E
Sbjct: 167 IAAQIEECIYQDVKNTDMKYKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEE 226
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + +G G CK C + R S P+
Sbjct: 227 MASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTT 286
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 287 FVVCNECGNRW 297
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+++++ + YK + R + N D KN R+ VL G++ P M+A+
Sbjct: 172 ELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDGKNPNLRRNVLCGNISPIVFAKMSAE 231
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 232 EMASDELKEMRKNLTKEAIREHQMAKTGGTETDLFSCGKCKMKNCTYTQVQTRSADEPMT 291
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 292 TFVFCNTCGNRW 303
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 55.5 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR +RK L LS I+ D + D+ A +A ++E +Y+ + + YK K
Sbjct: 1269 IRLNIRKTLTELLSS-RIKETEDLKLTDEEIA----DLAYNIELELYKYFKDTGAKYKAK 1323
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YR L+FN D KN +K+ + P+ +V ++ EMAS ++ W E K + E
Sbjct: 1324 YRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQELAEWREKETKHQLE 1379
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D+ + + I+ I + +Y++ + YK + R + N D KN RK VL G++ P
Sbjct: 143 DEEELGSQIEEDILFQVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPP 202
Query: 110 ETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH---- 165
+ MTA+EMASD+++ +N + + +G G CK C +
Sbjct: 203 DLFARMTAEEMASDELKEMRKNLTREAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQ 262
Query: 166 KRMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 263 TRSADEPMTTFVVCNECGNRW 283
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEK----WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+A+++E AMY+ G +E YK + R +LFN KN R ++L+G + P+++
Sbjct: 337 QIALAIEYAMYQNICGGAGEPTEAYKLQLRTILFNVK--KNTSLRDRLLVGSLSPDSLSK 394
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 395 MSSQDMASEELQ 406
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNP--IQVAISMESAMYEKWGRSSETYK 80
IR+ V+K +Y L+ + ++D +K +++ +ES +Y+ +G + + Y+
Sbjct: 821 IRDNVKKTVYEQLT-------NRLKMVDDLKLSEEELKNISLEIESQLYKCFGDTGQKYR 873
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
KYR L+FN D KN +++ + P +V ++ ++AS ++ LW E K
Sbjct: 874 NKYRSLIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDDLASQELALWRERETK 927
>gi|297665702|ref|XP_002811186.1| PREDICTED: SPOC domain-containing protein 1 [Pongo abelii]
Length = 1158
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ G V P +V M++ +
Sbjct: 595 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGAVTPYDLVRMSSMQ 654
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 655 LAPQELARWRDQEEK 669
>gi|149734279|ref|XP_001491643.1| PREDICTED: death-inducer obliterator 1 [Equus caballus]
Length = 2272
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 673 IRQNIRRSLKEILWKRVSDSD--DLIMTENEVGKIALHIEKEMFNLFRVTDNRYKSKYRS 730
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
++FN DPKN +VL ++ +V M +E+ S ++ +W E K
Sbjct: 731 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWKERPTK 779
>gi|332262279|ref|XP_003280189.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Nomascus
leucogenys]
gi|332262281|ref|XP_003280190.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Nomascus
leucogenys]
Length = 2236
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + +VA+ +E M+ + + YK KYR
Sbjct: 666 IRQNIRRSLKEILWKRVNDSD--DLLMTENEVGKVALHIEKEMFNLFQVTDNRYKSKYRS 723
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 724 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRAKL 781
>gi|209876019|ref|XP_002139452.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
gi|209555058|gb|EEA05103.1| transcription factor S-II domain-containing protein
[Cryptosporidium muris RN66]
Length = 322
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 49 IDQVKACNPIQV---AISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKK 101
+ Q + +P QV + +ESA+Y+++ G S Y + + + +N D KN E K
Sbjct: 169 VSQAELMDPSQVCEISAEVESALYKEYIIKQGNSVRDYNLQLKTIKWNLGDLKNPELNSK 228
Query: 102 VLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY--GICK 159
+ +G + P+ I M ++EMAS+ Q E ++ E + +N+V G
Sbjct: 229 LYIGKITPDEIATMHSREMASEAKQKEREKHKQESLEACQSDWD----LRNLVQKEGQFT 284
Query: 160 CSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
C +C + ++ P+ + CLNC W
Sbjct: 285 CGKCRTNKTTYFQMQTRSADEPMTTFVRCLNCGNRW 320
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D V + + +VA+++E M+ + + YK KYR
Sbjct: 688 IRQNIRRSLKEILWKRVNDSD--DLVMTESEVGKVALNIEKEMFNLFQGTDNRYKSKYRS 745
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
++FN DPKN +VL ++ +V M +E+ S ++ +W E K
Sbjct: 746 IMFNLKDPKNQGLFHRVLREEISLSKLVRMKPEELLSKELSVWKEKPAKA 795
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E +Y++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 125 MQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCL 180
++ +N K + +G G CK C + R + P+ + C
Sbjct: 234 LKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCN 293
Query: 181 NCYQYW 186
C W
Sbjct: 294 ECGNRW 299
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYENSR 133
YK + R + N D +N R++VL G + PE I NMTA+EMASD++ +L E R
Sbjct: 24 YKTRVRSRVANLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKEAIR 83
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHITCLNCYQYW 186
+ + T G + L+ G CK C + R + P+ + C C W
Sbjct: 84 EAQMSTTGGTKTSLLK-----CGKCKKRNCTYNQVQTRSADEPMTTFVFCNECGNRW 135
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
E +Y++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+
Sbjct: 174 EVPIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 233
Query: 125 MQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCL 180
++ +N K + +G G CK C + R + P+ + C
Sbjct: 234 LKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCN 293
Query: 181 NCYQYW 186
C W
Sbjct: 294 ECGNRW 299
>gi|194901746|ref|XP_001980412.1| GG18883 [Drosophila erecta]
gi|190652115|gb|EDV49370.1| GG18883 [Drosophila erecta]
Length = 2004
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q S+E M+ +GR YK KYR L+FN D KN +K+ V+P+ +V MT
Sbjct: 1312 QFVKSVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTP 1371
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 1372 EQLASQELAKWREEENR 1388
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 18/170 (10%)
Query: 30 NLYGA--LSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSET-YKFKYRR 85
N++G + S+ +D VI + + + ++A E +Y G ++T Y+ K R
Sbjct: 149 NIFGGDEVRTKSLAMIYDGLVIGALATPDDVFKLAKDTEHNLYRNHGSKTDTAYRNKLRS 208
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L FN DPKN R V+ G ++P + M+++EMAS + + E + E +
Sbjct: 209 LFFNLKDPKNPSLRNNVISGRIEPMRLALMSSEEMASAERKREDE-----KIEQENMKEA 263
Query: 146 GLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ V +C +CG + +S+ P+ CL C W
Sbjct: 264 MVAKAPTSVTDQLRCGKCGKRNVSYSQAQTRSADEPMTTFCECLQCGNRW 313
>gi|150864771|ref|XP_001383742.2| hypothetical protein PICST_57286 [Scheffersomyces stipitis CBS
6054]
gi|149386027|gb|ABN65713.2| transcription elongation factor S-IIMeiotic DNA recombination
factor (STP-alpha) [Scheffersomyces stipitis CBS 6054]
Length = 294
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ VA +ES +++ ++ ++ Y+ K R N + KN E R+++L G +KP + M+
Sbjct: 158 LSVAREIESEVFKSEYSNVNDNYRNKLRTFTMNLRNKKNPELRERLLSGGIKPAEFIKMS 217
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 218 PNEMAPEALKKEIEKLHK------KNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 271
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 272 RSADEPLTTFCTCENCGNRW 291
>gi|355562965|gb|EHH19527.1| Death-inducer obliterator 1 [Macaca mulatta]
Length = 2238
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 782
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D V + + ++A+++E M+ + + YK KYR
Sbjct: 832 IRQNIRRSLKEILWKRVNDSD--DLVMTESEVGKIALNIEKEMFNLFHATDNRYKSKYRS 889
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
++FN DPKN +VL D+ +V M +E+ S ++ +W E K
Sbjct: 890 IMFNLKDPKNQGLFHRVLREDLPLSRLVRMKPEELLSKELSVWREKPAKA 939
>gi|109091362|ref|XP_001086709.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Macaca mulatta]
Length = 2238
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 782
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 18/141 (12%)
Query: 58 IQVAISMESAMYE--KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
++ AI++E A + G S+ Y+ K R L N +N R+ V+ GD+ E +V M
Sbjct: 143 LKRAIAVEEAAFTICGKGESNSDYRNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTM 202
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHK-------- 166
++ +MAS+ E +K +A +F L + +C +C +
Sbjct: 203 SSSDMASE------ERKQKDKAIEEENLFKSLGAGEQQAETDAFQCGKCKQRKTIYRQAQ 256
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R + P+ +TC+NC W
Sbjct: 257 TRSADEPMTTFVTCVNCGNRW 277
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + + + ++A+ +E M+ + + YK +YR
Sbjct: 663 IRQNIRRSLKEILWKRVNDSD--DLIMTESEVGKIALHIEKEMFNLFQVTDNRYKSRYRS 720
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+AS ++ W E K E+ ++ S
Sbjct: 721 IMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKELSTWRERPAKPVLESRNKLPS 780
>gi|297259403|ref|XP_002798112.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Macaca mulatta]
Length = 2250
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 679 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 736
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 737 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 794
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 67/122 (54%), Gaps = 12/122 (9%)
Query: 14 SKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQ-----VAISMESAM 68
S++ + +R V KN+ L + +E+A +K+ QV P+Q +A S+ES M
Sbjct: 78 SQMTAEENPVRRNVVKNMSTILKSI-MESAVEKD--PQVFDGQPVQERAESLAKSIESTM 134
Query: 69 YEKWGRSS----ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
+ + G E YK K+R LL N D N F+ +++ GD+ P ++ M++++MA+ +
Sbjct: 135 FSQLGDRGRTCGEVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKMSSEDMANPE 194
Query: 125 MQ 126
++
Sbjct: 195 LK 196
>gi|397479128|ref|XP_003810881.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Pan paniscus]
gi|397479130|ref|XP_003810882.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Pan paniscus]
Length = 2240
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|388854758|emb|CCF51651.1| related to transcription elongation factor TFIIS [Ustilago hordei]
Length = 317
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 38/185 (20%)
Query: 20 NDCIREIVRKNLYGALSKVSIE--AAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSE 77
ND +R K LY +L +++ E +D V D A+++E+A+ G+ S
Sbjct: 150 NDKVRNACLKLLYQSL-EINKEQRGFNDSQVFD---------AAVAVEAAILANQGKGSV 199
Query: 78 T--YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYE 130
T Y+ K R L N D N + R +V+ D+ + +V MT +E+ASDK +L +
Sbjct: 200 TADYRNKVRSLSLNIKDKNNPDLRVRVIERDIPADKLVTMTNEELASDKRKREIEELQMQ 259
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
N K + + + +C RC ++ + P+ +TC N
Sbjct: 260 NLFKAKG----------AAAQEAETDAFQCGRCKQRKTRYYQMQTRSADEPMTTFVTCTN 309
Query: 182 CYQYW 186
C W
Sbjct: 310 CNHKW 314
>gi|119595730|gb|EAW75324.1| death inducer-obliterator 1, isoform CRA_c [Homo sapiens]
Length = 2276
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 706 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 763
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 764 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 821
>gi|195500468|ref|XP_002097386.1| GE26190 [Drosophila yakuba]
gi|194183487|gb|EDW97098.1| GE26190 [Drosophila yakuba]
Length = 2001
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q S+E M+ +GR YK KYR L+FN D KN +K+ V+P+ +V MT
Sbjct: 1307 QFVRSVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPKQLVRMTP 1366
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 1367 EQLASQELAKWREEENR 1383
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 165 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 224
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
+N K + +G G CK C + R + P+ + C C
Sbjct: 225 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 284
Query: 184 QYW 186
W
Sbjct: 285 NRW 287
>gi|426392422|ref|XP_004062551.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Gorilla gorilla
gorilla]
gi|426392424|ref|XP_004062552.1| PREDICTED: death-inducer obliterator 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 2239
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 669 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 726
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 727 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 784
>gi|44971714|gb|AAS49899.1| death inducer-obliterator-3 [Homo sapiens]
Length = 2240
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|410227672|gb|JAA11055.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410227678|gb|JAA11058.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354253|gb|JAA43730.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 2237
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|301129165|ref|NP_149072.2| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|301129170|ref|NP_001180298.1| death-inducer obliterator 1 isoform c [Homo sapiens]
gi|116241332|sp|Q9BTC0.5|DIDO1_HUMAN RecName: Full=Death-inducer obliterator 1; Short=DIO-1;
Short=hDido1; AltName: Full=Death-associated
transcription factor 1; Short=DATF-1
Length = 2240
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 228 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 287
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
+N K + +G G CK C + R + P+ + C C
Sbjct: 288 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 347
Query: 184 QYW 186
W
Sbjct: 348 NRW 350
>gi|354472422|ref|XP_003498438.1| PREDICTED: SPOC domain-containing protein 1-like [Cricetulus
griseus]
Length = 971
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N + KV DV P+ +V M++ +
Sbjct: 388 IAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQ 447
Query: 120 MASDKMQLWY-ENSRKG 135
+A ++ W + R+G
Sbjct: 448 LAPKELSRWRDQEERRG 464
>gi|344245025|gb|EGW01129.1| SPOC domain-containing protein 1 [Cricetulus griseus]
Length = 928
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N + KV DV P+ +V M++ +
Sbjct: 387 IAEDIEAALFHLTQDTNLRYKTKYRSLLFNLKDPRNSDLILKVAQCDVSPQDLVQMSSIQ 446
Query: 120 MASDKMQLWY-ENSRKG 135
+A ++ W + R+G
Sbjct: 447 LAPKELSRWRDQEERRG 463
>gi|322694712|gb|EFY86534.1| transcription elongation factor s-ii [Metarhizium acridum CQMa 102]
Length = 303
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 32/173 (18%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS-SETYKFKYRRLLFN 89
+Y L+ S E++ D I A+++E A++ ++ E YK K R L N
Sbjct: 148 IYNGLAYRSTESSDD-----------VIARAVAVEHAVFVEFKEDEGEGYKKKIRSLFAN 196
Query: 90 FNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD---KMQLWYENSRKGRAETNGRIFSG 146
N + K+V+ GD+ PE MT +E+ S+ K ++ E RA+
Sbjct: 197 LKTKSNKDLGKRVMSGDILPEKFAKMTDEELKSEDQRKKEIELEKENMKRAQVP------ 250
Query: 147 LVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYWASTN 190
++ K+I + +CSRC K++S+ P+ C+NC W T
Sbjct: 251 -MAEKSISDSL-ECSRCKMKKVSYTQAQTRSADEPMTTFCECMNCGHRWKGTQ 301
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E +Y+ +G ++ Y+ + R LLFN D N + R++V+ ++ E + +M
Sbjct: 200 DPKLLASKIEMELYKLFGGVNKKYRERGRSLLFNLKDKNNPDLRERVMSEEISAERLCSM 259
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRI 143
TA+E+AS ++ W R+ +AE ++
Sbjct: 260 TAEELASKELSQW----RQAKAEEMAKM 283
>gi|40287878|gb|AAR84049.1| death inducer-obliterator-2 [Mus musculus]
Length = 1183
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 63/120 (52%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + + + N + ++A+ +E M+ + + +K KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSDYL--IMTENEVGKIALHIEKEMFNLFQVTDNRFKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
++FN DPKN +VL ++ +V M +E+ S ++ +W E K E+ ++ +
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSMWTEKPTKSVIESRTKLLN 784
>gi|115468770|ref|NP_001057984.1| Os06g0595900 [Oryza sativa Japonica Group]
gi|113596024|dbj|BAF19898.1| Os06g0595900, partial [Oryza sativa Japonica Group]
Length = 630
Score = 54.7 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ G ++ YK K R LLFN D N R +VL GD+ P+ + +MT +E
Sbjct: 80 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 139
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 140 LASKELSDW----RLAKAE 154
>gi|303285732|ref|XP_003062156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456567|gb|EEH53868.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 252
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 16/131 (12%)
Query: 50 DQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVK 108
D V+ +P+ ++ + +E A++E G + +++ R FN KN R L GD+
Sbjct: 93 DAVRDPSPLFELGVKIERALFEAHGEDASNGEYRARARSIAFNLAKNESLRVGALAGDIA 152
Query: 109 PETIVNMTAKEMASDKMQLWYENSRK--------GRAETNGRIFSGLVSPKNIVYGICKC 160
P TI MT E+A++ M+ N+RK R TN G C+
Sbjct: 153 PATIARMTPDELATEDMR----NARKKMEERLTRKRTRTN---MDGATETDAFACAHCRS 205
Query: 161 SRCGHKRMSFI 171
+RC + R+ +
Sbjct: 206 TRCQYLRVGQV 216
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I C +A +E ++ G + YK
Sbjct: 137 DAVRTKCREMLTAAL-----QTDHDHVAIGADCEC----LAGQIEECIFRDVGNTDMKYK 187
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ R L N D KN R+KVL G + P+ I MT++EMASD+++
Sbjct: 188 NRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELK 233
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
++ +E +Y+ + YK + R + N D KN + RK VL G + PE I MT++E
Sbjct: 168 LSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEE 227
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + +G G CK C + R S P+
Sbjct: 228 MASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTT 287
Query: 176 HITCLNCYQYW----ASTNP 191
+ C C W A+T P
Sbjct: 288 FVVCNECGNRWKNRTATTEP 307
>gi|125597753|gb|EAZ37533.1| hypothetical protein OsJ_21863 [Oryza sativa Japonica Group]
Length = 1136
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ G ++ YK K R LLFN D N R +VL GD+ P+ + +MT +E
Sbjct: 323 LAFEIEGELFTLLGGVNKKYKEKGRSLLFNLKDKSNPVLRGRVLSGDITPKRLCSMTTEE 382
Query: 120 MASDKMQLWYENSRKGRAE 138
+AS ++ W R +AE
Sbjct: 383 LASKELSDW----RLAKAE 397
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK + R + N D KN RK VL G++ P+ MTA+EMASD+++ +N K
Sbjct: 185 YKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIR 244
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCG----HKRMSFIPLRRHITCLNCYQYWASTNPEIR 194
+ +G G CK C R + P+ + C C W + +
Sbjct: 245 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKTGTIKSE 304
Query: 195 VLP 197
+ P
Sbjct: 305 IKP 307
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 177 PEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMT 236
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC++C + R
Sbjct: 237 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTR 291
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 292 SADEPMTTFVMCNECGNRW 310
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L ++++ HD I + +++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLA-----IALQTDHDHVAI----GADCKRLSAQIEECIFRDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 247 QMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 296
>gi|402853722|ref|XP_003891539.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Papio anubis]
Length = 1199
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV +V M++ +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 696 LAPQELARWRDQEEK 710
>gi|383422683|gb|AFH34555.1| SPOC domain-containing protein 1 [Macaca mulatta]
Length = 1199
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV +V M++ +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 696 LAPQELARWRDQEEK 710
>gi|355745090|gb|EHH49715.1| hypothetical protein EGM_00425 [Macaca fascicularis]
Length = 1212
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV +V M++ +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 696 LAPQELARWRDQEEK 710
>gi|355557769|gb|EHH14549.1| hypothetical protein EGK_00493 [Macaca mulatta]
Length = 1212
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A+++ ++ YK KYR LLFN DP+N + KV+ GDV +V M++ +
Sbjct: 636 IAAGIEAALWDLTQGTNGRYKTKYRSLLFNLRDPRNLDLFLKVVHGDVTHYDLVRMSSMQ 695
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + K
Sbjct: 696 LAPQELARWRDQEEK 710
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 18 KCNDCIREIVRKNLYGALSKVSIEAAHDKNVI-DQVKACNPIQVAISMESAMYEKWGRSS 76
+ ++ +R V++ L L +A KNV D VK +V+ +E +Y+ + +
Sbjct: 290 QASESVRVNVKRTLLDVLLTRVKKAPDVKNVTADDVK-----RVSKQVEFELYKLFNDTG 344
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
YK KYR L+FN D KN + +L G++ P +V M++ ++AS ++ W E K
Sbjct: 345 AKYKAKYRTLIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQELMKWREQEAK 402
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 14/137 (10%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E ++++ + Y+ + R + N DPKN R+ VL G ++P I MTA+
Sbjct: 245 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPALRRNVLCGAIEPSLIARMTAE 304
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMS 169
EMASD+++ + E R+ + G + L G CK C + R +
Sbjct: 305 EMASDELKKLRNAMTQEAIREHQMAKTGGTVTDLFQ-----CGKCKKKNCTYNQVQTRSA 359
Query: 170 FIPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 360 DEPMTTFVLCNECGNRW 376
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y++ + YK + R + N D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 140 IYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 199
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
+N K + +G G CK C + R + P+ + C C
Sbjct: 200 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 259
Query: 184 QYW 186
W
Sbjct: 260 NRW 262
>gi|348510333|ref|XP_003442700.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Oreochromis niloticus]
Length = 2408
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
N+ +R+ +R++L L K ++ K +V ++A ++E M+ + Y
Sbjct: 734 NNQMRQNIRRSLTDILYKRVCDSDDLKMTESEVG-----RLAFAIEKEMFNLCLSTDSKY 788
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
K KYR L+FN DPKN +V+ G+V P +V ++A+E+ S ++ W
Sbjct: 789 KNKYRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKEISEW 837
>gi|341879127|gb|EGT35062.1| hypothetical protein CAEBREN_12817 [Caenorhabditis brenneri]
Length = 309
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 16/141 (11%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P ++A+ +E ++ +++ Y R +FN D KN R+ VL G V+ E M
Sbjct: 172 DPEELAVQIEEKLHSVHRGTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 231
Query: 116 TAKEMASDKMQLWYEN-SRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-------- 166
T++EMAS +++ + +++ E + G S + KC +CG K
Sbjct: 232 TSEEMASPEIRNMRDKFTKEAILEHQMSVQQGTPS------DMFKCGKCGKKNCTYTQLQ 285
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R S P+ + CL C W
Sbjct: 286 TRSSDEPMTTFVFCLECGNRW 306
>gi|402882034|ref|XP_003904560.1| PREDICTED: death-inducer obliterator 1 isoform 1 [Papio anubis]
gi|402882036|ref|XP_003904561.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Papio anubis]
Length = 2239
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVSDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 782
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + Y+ + R + N DPKN RK VL G V P++I MTA+
Sbjct: 155 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 214
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF--- 170
EMASD+++ + E R+ + G + L+ +C +C K S+
Sbjct: 215 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLL----------QCEKCKKKNCSYNQV 264
Query: 171 ------IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 265 QTRSADEPMTTFVLCNECGNRW 286
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 175 PEEMAAELEDAIYSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLARMT 234
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC++C + R
Sbjct: 235 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTR 289
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 290 SADEPMTTFVMCNECGNRW 308
>gi|452001563|gb|EMD94022.1| hypothetical protein COCHEDRAFT_1201848 [Cochliobolus
heterostrophus C5]
Length = 306
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ +A +E+A Y G ++ YK K R L N + N + RK+VL G++ + V MT
Sbjct: 171 LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTH 230
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
EM SD + E+ + + N + + + + + +C +C K++S+
Sbjct: 231 DEMKSDARR--AEDEKLEKENMNQAMVAQV---EKAISKEFQCGKCKQKKVSYSQAQTRS 285
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 286 ADEPMTTFCECMNCGNRW 303
>gi|71000299|ref|XP_754844.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|66852481|gb|EAL92806.1| transcription elongation factor S-II [Aspergillus fumigatus Af293]
gi|159127856|gb|EDP52971.1| transcription elongation factor S-II [Aspergillus fumigatus A1163]
Length = 304
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
A ++E+A + G + E Y+ K R L N + N R +VL +V PE V M+ E
Sbjct: 172 ASAVEAAAFNALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDE 231
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
+ SD+ + E R+ + E + + + + +C +CG +++++
Sbjct: 232 LKSDEQR---EQERRIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSAD 286
Query: 172 -PLRRHITCLNCYQYW 186
P+ TC+NC + W
Sbjct: 287 EPMTLFCTCMNCGKSW 302
>gi|340914730|gb|EGS18071.1| putative transcription elongation factor [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 303
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 14/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+Q A+ +E+A +E + + Y+ K R L+ + N E +V+ G++ P V MT
Sbjct: 168 LQKAMEVEAAAFEVYKGDTPEYRSKIRGLMTSLKRKDNAELGDRVMKGEITPHQFVKMTE 227
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
KE+AS+ +L R + E + + + + + +CS+C K++S+
Sbjct: 228 KELASEAQRL-----RDAQLERENMLKAQVPMAQKSISDSLQCSKCKQKKVSYSQAQTRS 282
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 283 ADEPMTTFCECTVCGHRW 300
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 33/180 (18%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 193 DAVRNKCREMLSAAL-----QTDHDHVAI----GADLERLSAQIEECIFRDVGNTDMKYK 243
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSRKG 135
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + E R+
Sbjct: 244 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 303
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ G + L + CS+C K R S P+ + C C W
Sbjct: 304 QMARTGGTQTDLFT----------CSKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 353
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + D KN RK VL G++ P+ MTA+
Sbjct: 184 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAE 243
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMASD+++ +N K + +G G CK C + R + P+
Sbjct: 244 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMT 303
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 304 TFVVCNECGNRW 315
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 53.9 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S+ V S N IR+ +R++L L K I++ V ++V ++A ++E
Sbjct: 618 SSQVATNSSQPGPNMQIRQNIRRSLKEILWKRVIDSDDLVMVENEVA-----RIASNIER 672
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
M+ + + YK KYR ++FN DPKN +VL ++ +V + +++AS K+
Sbjct: 673 EMFNLYRDTDSRYKSKYRNIMFNLKDPKNQGLYHRVLKEEISLAKLVRLKPEDLASKKLS 732
Query: 127 LWYENSRK 134
W E K
Sbjct: 733 SWKETGLK 740
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + P I MTA+
Sbjct: 223 KLASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAE 282
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +CS+C K
Sbjct: 283 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTYNQV 332
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 333 QTRSADEPMTTFVLCNECGNRW 354
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 177 PEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMT 236
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC++C + R
Sbjct: 237 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTR 291
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 292 SADEPMTTFVMCNECGNRW 310
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 177 PEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMT 236
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC++C + R
Sbjct: 237 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTR 291
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 292 SADEPMTTFVMCNECGNRW 310
>gi|441637983|ref|XP_004090096.1| PREDICTED: death-inducer obliterator 1 [Nomascus leucogenys]
Length = 1185
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + +VA+ +E M+ + + YK KYR
Sbjct: 666 IRQNIRRSLKEILWKRVNDSD--DLLMTENEVGKVALHIEKEMFNLFQVTDNRYKSKYRS 723
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 724 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRAKL 781
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 14/125 (11%)
Query: 19 CNDCIREIVRKNLYGALSKVSIEAAHD----KNVIDQVKACNPIQVAISMESAMYEKWGR 74
+ IRE V+K L L KV ++ D + ID + +I +E +++ +
Sbjct: 1118 ADQQIRESVKKTLAETL-KVRVQECKDMEYNEEHIDNL--------SIKIEEKLFKHFEN 1168
Query: 75 SSET-YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSR 133
+T YK KYR L+FN DPKN KK++ + P+ +V ++ +E+AS ++ W E
Sbjct: 1169 KVDTKYKSKYRSLIFNIKDPKNETLYKKIVDNLISPKDLVKLSPEELASQELARWREKEN 1228
Query: 134 KGRAE 138
+ + E
Sbjct: 1229 QHQLE 1233
>gi|451849746|gb|EMD63049.1| hypothetical protein COCSADRAFT_182336 [Cochliobolus sativus
ND90Pr]
Length = 306
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ +A +E+A Y G ++ YK K R L N + N + RK+VL G++ + V MT
Sbjct: 171 LNIAKHVEAAAYSNAGSVNDAYKGKMRSLFQNLKNKSNPQLRKRVLTGEITAKRFVVMTH 230
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
EM SD + E+ + + N + + + + + +C +C K++S+
Sbjct: 231 DEMKSDARR--AEDEKLEKENMNQAMVAQV---EKAISKEFQCGKCKQKKVSYSQAQTRS 285
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 286 ADEPMTTFCECMNCGNRW 303
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+ +E +Y++ + YK + R + N DPKN RK VL G ++ I +MTA+E
Sbjct: 276 MGAEIEDYIYQETKATDMKYKNRVRSRISNLKDPKNPNLRKNVLAGAIELSRIASMTAEE 335
Query: 120 MASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSF 170
MASD+++ L E R+ + G + L+ G CK C + R +
Sbjct: 336 MASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQ-----CGKCKKKNCTYNQVQTRSAD 390
Query: 171 IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 391 EPMTTFVLCNECGNRW 406
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + Y+ + R + N DPKN RK VL G V P+ I MTA+
Sbjct: 319 RLAWEIEECIYRDIKATDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQNIATMTAE 378
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L+ +C +C K
Sbjct: 379 EMASDELRELRNTMTQEAIREHQMAKTGGTTTDLL----------QCEKCKKKNCTYNQV 428
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 429 QTRSADEPMTTFVLCNECGNRW 450
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 37 KVSIEAAHDKNVIDQVKAC-----NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFN 91
K+ IE + ++ VK ++A +E+ +++ +G S + Y K R LLFN
Sbjct: 332 KLEIEEKEGRIAVEDVKGGLHFMDQARKLATDIEAELFKLYG-SKKMYNQKARSLLFNLK 390
Query: 92 DPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
D N E R +V G++ PE + M+ +++AS ++ W
Sbjct: 391 DKSNPELRARVFSGEIPPEDLCRMSGEQLASKELSDW 427
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 187 PEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMT 246
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC +C + R
Sbjct: 247 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 301
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 302 SADEPMTTFVMCNECGNRW 320
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 14/140 (10%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A ++E+ ++ + ++ Y+ K + + N D +N E + V+ G + PE M
Sbjct: 150 DPTNIAAAIENEIFMCFKDTNIKYRNKIKSKVMNLRDKRNPELCQLVIEGVITPERFAKM 209
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF----- 170
TA+EMASD+M+ RK E + L + G KC +CG + ++
Sbjct: 210 TAEEMASDEMK----KERKKITEEAIKEHQ-LATTAGTATGQFKCGKCGKRNTTYNQVQT 264
Query: 171 ----IPLRRHITCLNCYQYW 186
P+ + C+ C W
Sbjct: 265 RSADEPMTTFVYCIECGNRW 284
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEK----WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+++S+ESAMYE G +E Y+ + R ++FN KN R ++L+G + P+ +
Sbjct: 332 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 389
Query: 115 MTAKEMASDKMQ 126
M+ ++MAS+++Q
Sbjct: 390 MSTQDMASEELQ 401
>gi|224007775|ref|XP_002292847.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971709|gb|EED90043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 394
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 26/142 (18%)
Query: 67 AMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
A + W R +TY K R L+FN KN R +V+LG V PE +V MT++E+ +D+
Sbjct: 255 AAVDTWSRGVKQTYNEKVRTLVFNLK--KNGPLRDRVILGQVTPERLVKMTSEELQTDEK 312
Query: 126 QLWYENSRKGRAETNGRIFSGLVSPKNIVYGIC------------KCSRC---------G 164
E++ K E+ R + ++ + +C C RC
Sbjct: 313 AKAIEDTVKSLQES--RRLDWDQANEDKINDMCGIKGDLKNASLFTCGRCKSTKTTSTQK 370
Query: 165 HKRMSFIPLRRHITCLNCYQYW 186
R + P+ + CLNC + W
Sbjct: 371 QTRSADEPMTVFVLCLNCGKRW 392
>gi|383415435|gb|AFH30931.1| death-inducer obliterator 1 isoform b [Macaca mulatta]
Length = 1186
Score = 53.5 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 667 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 724
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 725 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 782
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E A+Y + YK + R L N DPKN R+K LLG + E + M
Sbjct: 28 DPEDMAAQLEEAIYVELKCCQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIGVEKMARM 87
Query: 116 TAKEMASDKM----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG------- 164
T +EMASD + Q + ++S N + K ++ KC RC
Sbjct: 88 TPEEMASDDLKQMRQKFVQDS------INKAQMAKFQGTKTDLF---KCDRCHKRNCIQL 138
Query: 165 HKRMSFIPLRRHITCLNCYQYW 186
H R P+ + C C W
Sbjct: 139 HTRDGDEPMVTFVMCDECGNRW 160
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEK----WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+++S+ESAMYE G +E Y+ + R ++FN KN R ++L+G + P+ +
Sbjct: 344 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 401
Query: 115 MTAKEMASDKMQ 126
M+ ++MAS+++Q
Sbjct: 402 MSTQDMASEELQ 413
>gi|71044477|ref|NP_542987.2| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|301129172|ref|NP_001180299.1| death-inducer obliterator 1 isoform b [Homo sapiens]
gi|168278571|dbj|BAG11165.1| death-inducer obliterator 1 [synthetic construct]
gi|223459792|gb|AAI37178.1| Death inducer-obliterator 1 [Homo sapiens]
Length = 1189
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|44971658|gb|AAS49898.1| death inducer-obliterator-2 [Homo sapiens]
Length = 1189
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|410227676|gb|JAA11057.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410263506|gb|JAA19719.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410304004|gb|JAA30602.1| death inducer-obliterator 1 [Pan troglodytes]
gi|410354255|gb|JAA43731.1| death inducer-obliterator 1 [Pan troglodytes]
Length = 1189
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 670 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 727
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 728 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 785
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK + R + N D KN RK VL G++ P+ MTA+EMASD+++ +N K
Sbjct: 249 YKNRVRSRISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEAIR 308
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+ +G G CK C + R + P+ + C C W
Sbjct: 309 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 360
>gi|58257648|dbj|BAA20791.2| KIAA0333 [Homo sapiens]
Length = 1223
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 704 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 761
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 762 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 819
>gi|407264578|ref|XP_003945793.1| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 883
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D+V+A +A +E A++ ++ YK KYR LLFN DP+N + KV DV P
Sbjct: 305 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 359
Query: 110 ETIVNMTAKEMASDKMQLWY-ENSRKG 135
+V M++ ++A ++ W + RKG
Sbjct: 360 NNLVQMSSIQLAPKELSRWRDQEERKG 386
>gi|407261229|ref|XP_003086425.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 1090
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D+V+A +A +E A++ ++ YK KYR LLFN DP+N + KV DV P
Sbjct: 512 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 566
Query: 110 ETIVNMTAKEMASDKMQLWY-ENSRKG 135
+V M++ ++A ++ W + RKG
Sbjct: 567 NNLVQMSSIQLAPKELSRWRDQEERKG 593
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 17/181 (9%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL D + I C + I E +Y+ + YK
Sbjct: 202 DAVRNKCREMLTAALQT-------DNDHIAIGTDCEHLSAQI--EEYIYQDVKNTDMKYK 252
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + RK VL G + PE I MT++EMAS++++ + K +
Sbjct: 253 NRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIREH 312
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW----ASTNPE 192
+G G CK C + R S P+ + C C W A+T P
Sbjct: 313 QMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKNRMAATEPG 372
Query: 193 I 193
+
Sbjct: 373 L 373
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 71/170 (41%), Gaps = 15/170 (8%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R + K +Y AL+ +A D N I + A +E+A+Y + G ++E YK
Sbjct: 125 DKLRNALSKLIYNALA---CDATCDSNTI--------AEKARDVEAAVYNQNGCTNEAYK 173
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
K R L N N R +VL G+++P + M+ +MAS++ + R+ +
Sbjct: 174 TKLRTLTANLKAKSNPGLRARVLKGELEPARLATMSVADMASEERKAADSKIREQTIHES 233
Query: 141 GRIFSGLVSPKNIVYGICKCSRC----GHKRMSFIPLRRHITCLNCYQYW 186
G CK +C R + P+ +TC C W
Sbjct: 234 LGAAEQEAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVTCTVCNNRW 283
>gi|119595732|gb|EAW75326.1| death inducer-obliterator 1, isoform CRA_e [Homo sapiens]
Length = 1225
Score = 53.5 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 706 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 763
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 764 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPARSVMESRTKL 821
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
++ +E +Y+ + YK + R + N D KN + RK VL G + PE I MT++E
Sbjct: 167 LSAQIEEYIYQDVKNTDMKYKNRVRSRISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEE 226
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + +G G CK C + R S P+
Sbjct: 227 MASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTT 286
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 287 FVVCNECGNRW 297
>gi|125987179|ref|XP_001357352.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|195155927|ref|XP_002018852.1| GL25727 [Drosophila persimilis]
gi|54645683|gb|EAL34421.1| GA17632 [Drosophila pseudoobscura pseudoobscura]
gi|194115005|gb|EDW37048.1| GL25727 [Drosophila persimilis]
Length = 313
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 177 PEEMAAELEDAIYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMT 236
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC +C + R
Sbjct: 237 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 291
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 292 SADEPMTTFVMCNECGNRW 310
>gi|452821015|gb|EME28050.1| hypothetical protein Gasu_43890 [Galdieria sulphuraria]
Length = 707
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
+ E +R+ L+++ +E D V + N ++AI +E+A++EK+ ++ Y +
Sbjct: 181 VAENIREKAKNVLNQILLENLEDTGV--DIDKTNISKIAIDIENALFEKYFKAD--YLEQ 236
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
R L FN +N + ++ +++ D+ P + MTA E+AS M
Sbjct: 237 LRSLTFNLRGKRNLDLKRAIVMSDISPTRLAEMTADELASKSM 279
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 63/137 (45%), Gaps = 14/137 (10%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + Y+ + R + N DPKN RK VL G V P++I MTA+
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMS 169
EMASD+++ + E R+ + G + L+ + CK C + R +
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLLQCEK-----CKKKNCSYNQVQTRSA 625
Query: 170 FIPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 626 DEPMTTFVLCNECGNRW 642
>gi|407263151|ref|XP_003085477.3| PREDICTED: SPOC domain-containing protein 1 [Mus musculus]
Length = 843
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D+V+A +A +E A++ ++ YK KYR LLFN DP+N + KV DV P
Sbjct: 265 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 319
Query: 110 ETIVNMTAKEMASDKMQLWY-ENSRKG 135
+V M++ ++A ++ W + RKG
Sbjct: 320 NNLVQMSSIQLAPKELSRWRDQEERKG 346
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q A + E A++ + ++ YK K R L+ N D KN R+ V+ GD+ + MT++
Sbjct: 165 QRAKAAEDAVFHTFNGTTGDYKTKIRSLVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQ 224
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY------GICKCSRC----GHKRM 168
+MAS++ + N+ K E N +F L + + G CK +C R
Sbjct: 225 DMASEERK----NADKKIKEEN--MFKALGAEEQQAETDAFQCGRCKQRKCRYRQAQTRS 278
Query: 169 SFIPLRRHITCLNCYQYW 186
+ P+ +TC C W
Sbjct: 279 ADEPMTTFVTCTVCNNRW 296
>gi|298713146|emb|CBJ26902.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 437
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 13/146 (8%)
Query: 51 QVKACNPIQVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
+ A P A +E A++ G S ++ YK K R + FN KN R+++L G + P
Sbjct: 293 ETSATLPASKAKEVEDAIFALCGGSVTKAYKAKAREMSFNLRVGKNDPLRERLLSGSLLP 352
Query: 110 ETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMS 169
+V M++ ++A + + E R R + S SP + V C CGH++
Sbjct: 353 SDLVRMSSNDLAP--LSVRRERERFARKRIR-EVTSSRDSPFHTVTDRFACVECGHEKTQ 409
Query: 170 FIPLRRH---------ITCLNCYQYW 186
+ RR + CL C W
Sbjct: 410 YRTWRRKAVVDRVRVIVQCLQCRHSW 435
>gi|302309342|ref|NP_986676.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|299788313|gb|AAS54500.2| AGR011Wp [Ashbya gossypii ATCC 10895]
gi|374109927|gb|AEY98832.1| FAGR011Wp [Ashbya gossypii FDAG1]
Length = 304
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSET 78
D +R++V + Y AL+K E+ H I + +AI +E M++ G + +
Sbjct: 141 DKLRDMVIRAFYDALAK---ESEHPPQSI--------LAIAIDIEKHMWQLNDPGENEKA 189
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKGRA 137
YK KYR + N N + + K+ GD+ PE +VN KE+A + ++ E +++
Sbjct: 190 YKDKYRVIYSNVISKNNRDLKHKITNGDITPEYLVNCDPKELAPEHLRKKLEEIAKQNLF 249
Query: 138 ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + +C +C K++S+ PL TC C W
Sbjct: 250 NAQGATLERSVTDR------FQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 301
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y++ + YK + + + N D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 188 IYQEIRNTDMKYKNRIQSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 247
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
+N K + +G G CK C + R + P+ + C C
Sbjct: 248 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 307
Query: 184 QYW 186
W
Sbjct: 308 NRW 310
>gi|431894600|gb|ELK04400.1| Death-inducer obliterator 1 [Pteropus alecto]
Length = 1849
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + D + D + + + +VA+ +E ++ + + YK KYR
Sbjct: 635 IRQNIRRSLKEILWKRVSDSD--DLIMTESEVGRVALRIEKELFNLFRVTDNRYKSKYRS 692
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFS 145
L+FN DPKN +VL ++ +V M +E+ S ++ +W E + E + +
Sbjct: 693 LMFNLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSVWKERPTRPVMEPRAKFLN 752
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 3/115 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E ++ + + YK KYR
Sbjct: 918 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKELFNLFHVTDNRYKSKYRS 975
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
++FN DPKN +VL ++ +V M +E+ S ++ +W E K N
Sbjct: 976 IMFNLKDPKNQGLFHRVLREEIPLSKLVRMKPEELLSKELSVWKERPTKSVEARN 1030
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEK----WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+++S+ESAMYE G +E Y+ + R ++FN KN R ++L+G + P+ +
Sbjct: 396 QLSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSK 453
Query: 115 MTAKEMASDKMQ 126
M+ ++MAS+++Q
Sbjct: 454 MSTQDMASEELQ 465
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
DC+R R+ L AL + H +D C +A +E +++++ + Y
Sbjct: 139 TDCVRSKCRELLVVALQ---TDDDHKAIRVD----CE--HLAAQIEEQIFQEFKSTDMKY 189
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAET 139
K + R + N D KN E R+ VL G++ P I MTA+EMAS +++ E K
Sbjct: 190 KTRLRSRISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAELKQMREALTKESIRE 249
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+ G + C C + R + P+ + C +C W
Sbjct: 250 HQLSKVGGTETDMFICSKCHGKSCTYTQVQTRSADEPMTTFVLCNDCGNRW 300
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 58/138 (42%), Gaps = 12/138 (8%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E A+Y + YK + R L N DPKN R+K LLG + E + M
Sbjct: 28 DPEDMAAQLEEAIYVELKSCQVKYKNRIRSRLANLRDPKNPALREKFLLGLISVEQLARM 87
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG-------HKRM 168
T +EMASD ++ + + + N + K ++ KC RC H R
Sbjct: 88 TPEEMASDDLKQMRQ--KFVQESINAAQMAEFQGTKTDLF---KCDRCQKRNCIQLHTRD 142
Query: 169 SFIPLRRHITCLNCYQYW 186
+ + C C W
Sbjct: 143 GDESMITFVMCDECGNRW 160
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 68/158 (43%), Gaps = 29/158 (18%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 419 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 478
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF--- 170
EMASD+++ + E R+ + G + L +CS+C K ++
Sbjct: 479 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 528
Query: 171 ------IPLRRHITCLNCYQYWASTN-----PEIRVLP 197
P+ + C C W ST+ IR LP
Sbjct: 529 QTRSADEPMTTFVLCNECGNRWKSTDWRATRRSIRDLP 566
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 14/140 (10%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DPKN R+ VL G + I MTA+
Sbjct: 214 KMAAEIEDHIYQELKGTDMKYRNRVRSRISNLKDPKNPGLRRNVLCGAISAGRIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMS 169
EMASD+++ + E R+ + G + L G CK C + R +
Sbjct: 274 EMASDELKELRNAMTQEAIREHQMAKTGGTATDLFQ-----CGKCKKKNCTYNQVQTRSA 328
Query: 170 FIPLRRHITCLNCYQYWAST 189
P+ + C C W +T
Sbjct: 329 DEPMTTFVLCNECGNRWKAT 348
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 24/205 (11%)
Query: 2 IHVIFSTNVP-KASKVVK------CNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKA 54
+H + P KAS V+ D +R+ R L+ AL ++ + + ++
Sbjct: 216 LHGVPVDRAPEKASTAVEDYPGPASGDAVRDRARGFLWRAL----VDGMQSRRDLGADRS 271
Query: 55 CNPIQVAISMESAMYEKW---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPET 111
+VA +E A+++++ +S++ Y + + L +NF D KN + KVL G PE
Sbjct: 272 GETARVAAEIEKALWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQ 331
Query: 112 IVNMTAKEMASDKMQLWYENSRKGRAET------NGRIFSGLVSPKNIVYGICKCSRC-- 163
+ M++ ++ASD+ + E +K E ++ G C+ ++
Sbjct: 332 LAIMSSADLASDEKKRMRELQKKESMEACQSDWEMKKLMEGASEGGQFPCFKCRTTKTVY 391
Query: 164 --GHKRMSFIPLRRHITCLNCYQYW 186
R S P+ +TCL C W
Sbjct: 392 FQMQTRSSDEPMTTFVTCLECGNRW 416
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 179 PEEMAAELEDAIYAEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMT 238
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K + L + + + KC +C + R
Sbjct: 239 PEEMASDEMKKLREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 293
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 294 SADEPMTTFVMCNECGNRW 312
>gi|195329544|ref|XP_002031470.1| GM24029 [Drosophila sechellia]
gi|194120413|gb|EDW42456.1| GM24029 [Drosophila sechellia]
Length = 2010
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q ++E M+ +GR YK KYR L+FN D KN +K+ V+P +V MT
Sbjct: 1313 QFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTP 1372
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 1373 EQLASQELAKWREEENR 1389
>gi|24646283|ref|NP_650193.1| protein partner of snf, isoform A [Drosophila melanogaster]
gi|7299622|gb|AAF54807.1| protein partner of snf, isoform A [Drosophila melanogaster]
Length = 2016
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q ++E M+ +GR YK KYR L+FN D KN +K+ V+P +V MT
Sbjct: 1315 QFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTP 1374
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 1375 EQLASQELAKWREEENR 1391
>gi|386765657|ref|NP_001247075.1| protein partner of snf, isoform B [Drosophila melanogaster]
gi|383292673|gb|AFH06393.1| protein partner of snf, isoform B [Drosophila melanogaster]
Length = 2018
Score = 53.1 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q ++E M+ +GR YK KYR L+FN D KN +K+ V+P +V MT
Sbjct: 1317 QFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTP 1376
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 1377 EQLASQELAKWREEENR 1393
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 72/174 (41%), Gaps = 14/174 (8%)
Query: 17 VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS 76
V C D +R R+ L AL D++ + C +++ +E ++ G +
Sbjct: 277 VTC-DAVRSKCREMLAAALQT-------DRDHVAIGADCE--RLSAQIEECIFRDVGNTD 326
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
YK + R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K
Sbjct: 327 MKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKTMTKEA 386
Query: 137 AETNGRIFSGLVSPKNIVYGICKCSRCG----HKRMSFIPLRRHITCLNCYQYW 186
+ +G G C+ C R S P+ + C C W
Sbjct: 387 IREHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 440
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 52.8 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L+ + + D + + + N + ++A ++E M+ + YK KYR
Sbjct: 657 MRQNIRRSLTDILFKRVSDSDDLKMTE--NEVGRLAFAIEKEMFNLCLSTDSKYKNKYRT 714
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
L+ + DPKN KV+ GDV P +V + A+E+ S +M W
Sbjct: 715 LMLHLKDPKNKGLFYKVMGGDVTPFRLVRLGAEELVSREMSEW 757
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + Y+ + R + N DPKN RK VL G V P++I MTA+
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF--- 170
EMASD+++ + E R+ + G + L+ +C +C K S+
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLL----------QCEKCKKKNCSYNQV 620
Query: 171 ------IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 621 QTRSADEPMTTFVLCNECGNRW 642
>gi|166796454|gb|AAI59331.1| Unknown (protein for IMAGE:8927043) [Xenopus (Silurana) tropicalis]
Length = 1162
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFK 82
IR+ +R++L L K I++ V ++V ++A ++E M+ + + YK K
Sbjct: 617 IRQNIRRSLKQILWKRVIDSDDLVMVENEV-----ARIATNIEREMFNLYRDTDSRYKAK 671
Query: 83 YRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKG 135
YR ++FN DPKN +VL ++ +V + +E+AS K+ W E SR G
Sbjct: 672 YRNIMFNLKDPKNQGLYHRVLKEEIPLAKLVRLKPEELASRKLSSWKETGSRSG 725
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + Y+ + R + N DPKN RK VL G V P++I MTA+
Sbjct: 511 RLAWEIEECIYSEVKVTDMKYRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAE 570
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF--- 170
EMASD+++ + E R+ + G + L+ +C +C K S+
Sbjct: 571 EMASDELRELRNTMTQEAIREHQMAKTGGTQTDLL----------QCEKCKKKNCSYNQV 620
Query: 171 ------IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 621 QTRSADEPMTTFVLCNECGNRW 642
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 77/189 (40%), Gaps = 38/189 (20%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
S N K +V+ + R++ RK L GALS+ + A + ++K N
Sbjct: 128 SHNNDKDMQVLSSGNPTRDLSRKLLIGALSRDGLNKA----IFKELKGPNM--------- 174
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
YK + R + N D KN +KVL G + PE I MTA+EMASD+M+
Sbjct: 175 -----------KYKNRVRSRISNLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMK 223
Query: 127 LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHI 177
R+G A+ R V+ + + C +C K S+ P+ +
Sbjct: 224 KL----RQGYAKEGIRDAQMAVT-QGTKTDLLTCGKCHKKNCSYNQMQTRSADEPMTTFV 278
Query: 178 TCLNCYQYW 186
C C W
Sbjct: 279 FCHECGHRW 287
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 24/145 (16%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
N Q+A +E +Y++ + Y+ + R + N DP+N R+ VL G + I M
Sbjct: 144 NCEQLASEIEDHIYQELKSTDMKYRNRVRSRISNLRDPRNPALRRSVLCGGIAASRIARM 203
Query: 116 TAKEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---- 166
TA+EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 204 TAEEMASDELKELRNAMTLEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTY 253
Query: 167 -----RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 254 NQVQTRSADEPMTTFVLCNECGNRW 278
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 37/196 (18%)
Query: 10 VPKASKV-------VKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAI 62
VP A ++ V C D +R R+ L AL + HD + C + I
Sbjct: 412 VPSAPRITTFPPVPVTC-DAVRNKCREMLTAAL-----QTDHDHMAVG--ADCEGLSAQI 463
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
E ++ G + YK + R + N D KN + R+ VL G + P+ I MT++EMAS
Sbjct: 464 --EECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMAS 521
Query: 123 DKMQ-----------LWYENSRKGRAETNGRIFS-GLVSPKNIVYGICKCSRCGHKRMSF 170
D+++ ++ +R G +T+ +F+ G KN Y + R S
Sbjct: 522 DELKEIRKAMTKEAIREHQMARTGGTQTD--LFTCGRCRRKNCTYTQVQ------TRSSD 573
Query: 171 IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 574 EPMTTFVVCNECGNRW 589
>gi|363755550|ref|XP_003647990.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892026|gb|AET41173.1| hypothetical protein Ecym_7343 [Eremothecium cymbalariae
DBVPG#7215]
Length = 306
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW--GRSSE 77
ND +R++V K Y AL+K ++ H I + +AI +E MY+ + +
Sbjct: 142 NDKLRDMVIKAFYDALAK---QSEHPPQSI--------LAIAIDIEKHMYKLKIPAENDK 190
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKGR 136
YK KYR + N N + + K+ GD+ P+ +VN KE+A + ++ E +++
Sbjct: 191 GYKDKYRVIYSNVISKNNPDLKHKITNGDISPDYLVNCDPKELAPEHLKKKLEEIAKQNL 250
Query: 137 AETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + +C +C K++S+ PL TC C W
Sbjct: 251 FNAQGATLERSVTDR------FQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 303
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 146 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 205
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH 165
EMASD+++ +N K + +G G CK C +
Sbjct: 206 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTY 252
>gi|149244436|ref|XP_001526761.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449155|gb|EDK43411.1| hypothetical protein LELG_01589 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 322
Score = 52.8 bits (125), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ VA +ESA+++ ++ + +E Y+ K R + + KN E R+++L + E + M+
Sbjct: 186 VAVAAEIESAVFKNEYLKVNEAYRNKLRTFVMQLRNKKNPELRERLLTRQITAERFIKMS 245
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA ++++ E K +F + K V C +C HK++S+
Sbjct: 246 PNEMAPEELKKEIEKMHKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 299
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 300 RSADEPLTTFCTCENCGNRW 319
>gi|261338797|gb|ACX70080.1| UT01587p [Drosophila melanogaster]
Length = 1144
Score = 52.4 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q ++E M+ +GR YK KYR L+FN D KN +K+ V+P +V MT
Sbjct: 443 QFVKNVELEMFNSFGRDVGAKYKAKYRSLMFNIKDRKNRTLFEKICAKQVEPRQLVRMTP 502
Query: 118 KEMASDKMQLWYENSRK 134
+++AS ++ W E +
Sbjct: 503 EQLASQELAKWREEENR 519
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSR 133
YK + R + N D KN R+KVL GDV E + MTA+EMAS +M+ L E R
Sbjct: 387 YKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIR 446
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQ 184
+ T G + L+ KC +C + +++ P+ C C
Sbjct: 447 DAQMATTGGTQTDLL----------KCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGN 496
Query: 185 YWAST 189
W +T
Sbjct: 497 RWKAT 501
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 23/111 (20%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSR 133
YK + R + N D KN R+KVL GDV E + MTA+EMAS +M+ L E R
Sbjct: 138 YKTRVRSRIANLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIR 197
Query: 134 KGRAETNGRIFSGLV-----SPKNIVYG-------------ICKCSRCGHK 166
+ T G + L+ +N+ Y C C+ CG++
Sbjct: 198 DAQMATTGGTQTDLLKCGKCKKRNVTYNQVQTRSADEPMTTFCYCNECGNR 248
>gi|361130396|gb|EHL02209.1| putative Transcription elongation factor S-II [Glarea lozoyensis
74030]
Length = 411
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 60/149 (40%), Gaps = 27/149 (18%)
Query: 55 CNPIQV---AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPET 111
+P QV A+ +E A YE + Y+ K R L N + N E +VL GD+ P
Sbjct: 159 ASPTQVIAKAMEVEKAAYESHKGDNSDYRAKLRSLFQNLKNKDNRELGIQVLSGDILPSK 218
Query: 112 IVNMTAKEMASDK-----MQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK 166
V MT E+ S K +L YEN + + + S + +C RCG K
Sbjct: 219 FVVMTHDELKSAKRIEEDKKLNYENMKMAQVPMAEKSISDAL----------RCGRCGQK 268
Query: 167 RMSFI---------PLRRHITCLNCYQYW 186
++S+ P+ C C W
Sbjct: 269 KVSYSQAQTRSADEPMTTFCECTVCGNRW 297
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 4/132 (3%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y+ + YK + R + N D KN + RK VL G + PE I MT++
Sbjct: 165 EMAAQIEEFIYQDVKNTDLKYKNRVRSRISNLKDSKNPDLRKNVLCGVITPEQIAVMTSE 224
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLR 174
EMAS++++ + K + +G G C+ C + R S P+
Sbjct: 225 EMASNELKEIRKAMTKEAIREHQMAKTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMT 284
Query: 175 RHITCLNCYQYW 186
+ C C W
Sbjct: 285 TFVVCNECGNRW 296
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 52.4 bits (124), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK + R + N D KN RK VL G++ P+ MTA+EMASD+++ +N K
Sbjct: 3 YKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEAIR 62
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+ +G G CK C + R + P+ + C C W
Sbjct: 63 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 114
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL D++ + C + I E ++ G + Y+
Sbjct: 137 DAVRNKCREMLTAALQ-------TDRDHMAVGADCEGLSAQI--EECIFRDVGNTDMKYR 187
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 188 NRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 247
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G G C+ C + R S P+ + C C W
Sbjct: 248 QMARTGGTQTDLFTCGKCRRKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 297
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 167 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 226
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH 165
EMASD+++ +N K + +G G CK C +
Sbjct: 227 EMASDELKEMRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTY 273
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 33/180 (18%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD + + ++ +E ++ G + YK
Sbjct: 92 DAVRNKCREMLTLAL-----QTDHDHKAV----GVDCEHLSAQIEECIFLDVGNTDMKYK 142
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSRKG 135
+ R + N D KN R+ VL G + P+ I MT++EMASD+++ + E R+
Sbjct: 143 NRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 202
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ G + L + CS+C K R S P+ ++ C C W
Sbjct: 203 QMARTGGTQTDLFT----------CSKCKKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 252
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 4/84 (4%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A+ +E +++ G S+ YK K R LLFN D N R +VL G++ P+ + +MT +E
Sbjct: 338 LALRIEEDLFQLCGGVSKKYKEKGRSLLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEE 397
Query: 120 MASDKMQLWYENSRKGRAETNGRI 143
+AS ++ R +AE G++
Sbjct: 398 LASKELSA----RRLAKAEELGKM 417
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 7/73 (9%)
Query: 59 QVAISMESAMYEKW-----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
Q+ IS+E A+Y+ +SE YK + R +LFN KN R ++L+G + P+ +
Sbjct: 323 QLGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALS 380
Query: 114 NMTAKEMASDKMQ 126
M+++EMAS+++Q
Sbjct: 381 RMSSQEMASEELQ 393
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 11/139 (7%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
++A +ES ++ ++ S Y + + + +N +D KN E K+ +G + PE I
Sbjct: 192 EIAAEIESVLHREYIVKGDNSVRDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIAR 251
Query: 115 MTAKEMASDKMQLWYENSRKGRAE---TNGRIFSGLVSPKNIVYGICKCSRCGHKRM--- 168
M ++EMASD Q E ++ E ++ + + + G CK ++ + +M
Sbjct: 252 MQSREMASDAKQKEREKHKQESLEACQSDWDLRNLIQKEGQFTCGKCKTNKTTYYQMQTR 311
Query: 169 -SFIPLRRHITCLNCYQYW 186
+ P+ + CLNC W
Sbjct: 312 SADEPMTTFVRCLNCGNRW 330
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++A +E A+Y ++ + YK + R + N DPKN R + G V + + MT
Sbjct: 214 PEEMAAELEDAIYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMT 273
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
+EMASD+M+ E K A + + L + + + KC +C + R
Sbjct: 274 PEEMASDEMKKLREKFVK-EAINDAQ----LATVQGTKTDLLKCGKCKKRNCTYNQLQTR 328
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 329 SADEPMTTFVMCNECGNRW 347
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 24/122 (19%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSR 133
Y+ + R + N DPKN RK VL G V P++I MTA+EMASD+++ + E R
Sbjct: 7 YRNRIRSRISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIR 66
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQ 184
+ + G + L+ +C +C K S+ P+ + C C
Sbjct: 67 EHQMAKTGGTQTDLL----------QCEKCKKKNCSYNQVQTRSADEPMTTFVLCNECGN 116
Query: 185 YW 186
W
Sbjct: 117 RW 118
>gi|213406231|ref|XP_002173887.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
gi|212001934|gb|EEB07594.1| transcription elongation factor S-II [Schizosaccharomyces japonicus
yFS275]
Length = 296
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 26/172 (15%)
Query: 27 VRKNLYGAL-SKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRR 85
+R N G L + ++++ +V+ + + +QV +SM G++ Y+ K R
Sbjct: 136 IRNNCIGLLYNALAMDTDEPSSVLLKTASAIDVQV-LSMS------MGKTDSAYRNKMRS 188
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA--ETNGRI 143
L N D +N + RK+V+ G + P+ + M++ E+AS E+ RK A E
Sbjct: 189 LYMNLKDKQNPQLRKRVISGAISPKRLSEMSSAELAS-------EDRRKEDAKLEQENLF 241
Query: 144 FSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ P+ + + C +C K++S+ P+ C C W
Sbjct: 242 HAQGAKPQKAITDLFTCGKCKQKKVSYFQMQTRSADEPMTTFCECTVCGNRW 293
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+ +S+E AMY+ G +E YK + R +LFN KN R ++L+G + P+ +
Sbjct: 293 QLGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQ 350
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 351 MSSQDMASEELQ 362
>gi|148698211|gb|EDL30158.1| mCG52124 [Mus musculus]
Length = 216
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
D+V+A +A +E A++ ++ YK KYR LLFN DP+N + KV DV P
Sbjct: 28 DEVEA-----IAEGIEEALFHLTQDTNLRYKNKYRSLLFNLRDPRNVDLFLKVAHCDVTP 82
Query: 110 ETIVNMTAKEMASDKMQLWYEN-SRKG 135
+V M++ ++A ++ W + RKG
Sbjct: 83 NNLVQMSSIQLAPKELSRWRDQEERKG 109
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPI---------QVAISMESAMYEKW- 72
++ + R+N+ AL K+ +E A + + Q P + +++E AMY+
Sbjct: 279 LQSLARRNVANALVKLFVEQA--ASALQQGAYSMPAGKTKEAVGEALGVAIEHAMYKHLC 336
Query: 73 ---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+T+ M+ ++MAS +++
Sbjct: 337 GGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELR 391
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 33/180 (18%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD + + ++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTLAL-----QTDHDHKAV----GVDCEHLSAQIEECIFLDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSRKG 135
+ R + N D KN R+ VL G + P+ I MT++EMASD+++ + E R+
Sbjct: 187 NRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 136 RAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ G + L + CS+C K R S P+ ++ C C W
Sbjct: 247 QMARTGGTQTDLFT----------CSKCKKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 296
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 9/106 (8%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD I + +++ +E ++ G + YK
Sbjct: 10 DAVRNKCREMLTAAL-----QTDHDHVAI----GADCERLSAQIEECIFRDVGNTDMKYK 60
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ R + N D KN + R+ VL G + P+ I MT++EMASD+++
Sbjct: 61 NRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 106
>gi|190345115|gb|EDK36938.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMY-EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ VA ++E ++ +++ ++ Y+ K R L N + KN + R ++L G + P + M
Sbjct: 77 LDVARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMN 136
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 137 PNEMAPESLKQEIEKLNKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 190
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 191 RSADEPLTTFCTCENCGNRW 210
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 16/177 (9%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW----GRSS 76
D +R+ R L+ A+ V+ ++ + + C ++A +ES ++ ++ S
Sbjct: 159 DVMRDKARHFLWKAM--VTGVPYSQAKLMKESQVC---EIAAEIESVLHREYIVKGDNSV 213
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
Y + + + +N +D KN E K+ +G + PE I M ++EMASD Q E ++
Sbjct: 214 RDYNLQLKTIKWNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQES 273
Query: 137 AE---TNGRIFSGLVSPKNIVYGICKCSRCGHKRM----SFIPLRRHITCLNCYQYW 186
E ++ + + + G CK ++ + +M + P+ + CLNC W
Sbjct: 274 LEACQSDWDLRNLIQKEGQFTCGKCKTNKTTYYQMQTRSADEPMTTFVRCLNCGNRW 330
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPI---------QVAISMESAMYEKW- 72
++ + R+N+ AL K+ +E A + + Q P + +++E AMY+
Sbjct: 279 LQSLARRNVANALVKLFVEQA--ASALQQGAYSMPAGKTKEAVGEALGVAIEHAMYKHLC 336
Query: 73 ---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+T+ M+ ++MAS +++
Sbjct: 337 GGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELR 391
>gi|146423462|ref|XP_001487659.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 213
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMY-EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ VA ++E ++ +++ ++ Y+ K R L N + KN + R ++L G + P + M
Sbjct: 77 LDVARNIELGVFKQEYSAVNDAYRNKLRTLTMNLRNKKNPDLRDRLLTGQIAPSKFITMN 136
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 137 PNEMAPESLKQEIEKLNKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 190
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 191 RSADEPLTTFCTCENCGNRW 210
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW---GRSS 76
D +R+ R L+ AL ++ + ++ +VA +E A+++++ +S+
Sbjct: 241 GDAVRDRARGFLWRAL----VDGMQSGRDLGADRSGETARVAAEIEKALWQEYCVKRKST 296
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
+ Y + + L +NF D KN + KVL G PE + M + ++ASD+ + E +K
Sbjct: 297 KEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLATMNSADLASDEKKRMRELQKKES 356
Query: 137 AET------NGRIFSGLVSPKNIVYGICKCSRC----GHKRMSFIPLRRHITCLNCYQYW 186
E ++ G C+ ++ R S P+ +TCL C W
Sbjct: 357 MEACQSDWEMKKLMEGGTDGGQFPCFKCRTTKTVYFQMQTRSSDEPMTTFVTCLECGNRW 416
>gi|322712025|gb|EFZ03598.1| transcription elongation factor S-II [Metarhizium anisopliae ARSEF
23]
Length = 300
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 58 IQVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
I A+++E A++ ++ E YK K R L N N + K+V+ GD+ PE MT
Sbjct: 164 IARAVAVEHAVFIEFKEDEGEGYKKKIRSLFANLKTKSNKDLGKRVMSGDISPEKFAKMT 223
Query: 117 AKEMASD---KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-- 171
+E+ S+ K ++ E RA+ ++ K+I + +C RC K++S+
Sbjct: 224 DEELKSEDQRKKEIELEKENMKRAQVP-------MAEKSISDSL-ECGRCKMKKVSYTQA 275
Query: 172 -------PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 276 QTRSADEPMTTFCECMNCGHRW 297
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ + + YK + R + N D KN + RK VL G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRR 175
MAS++++ + K + + +G G CK C + R + P+
Sbjct: 219 MASNELKEMRKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTT 278
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 279 FVACNECGNRW 289
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P +A +E +Y+++ + YK + R + N D +N R L G V P + NMT
Sbjct: 163 PEYLAQMLEECIYKEFRNTDMKYKNRVRSRVSNLKDARNPNLRLNFLCGQVSPARLSNMT 222
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
++EMASD+M+ + K + L + + + KC +CG + R
Sbjct: 223 SEEMASDEMKNIRQKFTKESIND-----AQLATVQGTQTDLLKCGKCGKRNCTYNQVQTR 277
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 278 SADEPMTTFVLCNACGNRW 296
>gi|119492710|ref|XP_001263674.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
gi|119411834|gb|EAW21777.1| transcription elongation factor S-II [Neosartorya fischeri NRRL
181]
Length = 304
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 15/136 (11%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
A ++E+A + G + E Y+ K R L N + N R +VL +V PE V M+ E
Sbjct: 172 ACAVEAAAFSALGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLSNEVTPEQFVKMSHDE 231
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-------- 171
+ S + + E RK + E + + + + +C +CG +++++
Sbjct: 232 LKSAEQR---EQERKIQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSAD 286
Query: 172 -PLRRHITCLNCYQYW 186
P+ TC+NC + W
Sbjct: 287 EPMTLFCTCMNCGKSW 302
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ + + YK + R + N D KN + RK VL G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFGEMQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEE 218
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRR 175
MAS++++ + K + + +G G CK C + R + P+
Sbjct: 219 MASNELKEMRKAMTKAAIQEHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQIRSADEPMTT 278
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 279 FVACNECGNRW 289
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPI---------QVAISMESAMYEKW- 72
++ + R+N+ AL K+ +E A + + Q P + +++E AMY+
Sbjct: 279 LQSLARRNVANALVKLFVEQA--ASALQQGAYSMPAGKTKEAVGEALGVAIEHAMYKHLC 336
Query: 73 ---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+T+ M+ ++MAS +++
Sbjct: 337 GGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELR 391
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ + + YK + R + N D KN + RK VL G + PE I M+ +E
Sbjct: 159 LAAQIEEVVFRELQNTDMKYKNRIRSRISNLKDSKNPDLRKNVLCGIITPEQIAIMSCEE 218
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS++++ + K + + +G G CK C + R + P+
Sbjct: 219 MASNELKEMRKEITKASIQEHQMGKTGGTQSDLFTCGKCKKKNCTYTQVQTRSADEPMTT 278
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 279 FVVCNECGNRW 289
>gi|342878267|gb|EGU79622.1| hypothetical protein FOXB_09905 [Fusarium oxysporum Fo5176]
Length = 315
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
I A+++E A Y K+ + YK K R L N + N E + VL G++ E V MT
Sbjct: 172 ITRAVAVEHAAYTKFKGETPDYKKKIRSLFTNLKNKSNRELGRSVLSGEITAEKFVIMTD 231
Query: 118 KEMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
E+ S+ +++L EN +K + ++ K+I + +C RC K++S+
Sbjct: 232 DELKSEEQRKKELELEKENMKKAQVP---------MAEKSISESL-ECGRCKKKQVSYTQ 281
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C+ C W
Sbjct: 282 AQTRAADEPMTTFCECMACGHRW 304
>gi|354543920|emb|CCE40642.1| hypothetical protein CPAR2_106770 [Candida parapsilosis]
Length = 300
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
I +A +ES +++ ++ + +++Y+ K R N + KN E R++VL + + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDSYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 224 PNEMAPEALKKEIEKLHKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 277
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 278 RSADEPLTTFCTCENCGNRW 297
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 6/133 (4%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y+ + YK + R + N D KN + RK VL G + PE I MT++
Sbjct: 71 EMAAQIEEFIYQDVKNTDLKYKNRVRSHISNLKDSKNPDLRKNVLCGVITPEEIAVMTSE 130
Query: 119 EMASDKM-QLW----YENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL 173
EMAS+++ ++W E R+ + G + L + + C ++ R S P+
Sbjct: 131 EMASNELKEIWKAMTKEAIREHQMAKTGGTQTDLFTCRKCRKKNCTYTQV-QTRSSDEPM 189
Query: 174 RRHITCLNCYQYW 186
+ C C +W
Sbjct: 190 TTFVVCNECGNHW 202
>gi|301111450|ref|XP_002904804.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
gi|262095134|gb|EEY53186.1| transcription elongation factor, putative [Phytophthora infestans
T30-4]
Length = 307
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 25/163 (15%)
Query: 46 KNVIDQVKACNPIQVAISMESAMYEKW-----GRSSETYKFKYRRLLFNFNDPKNHEFRK 100
K +++ + NP +VA ++E AM + G + Y KYR+L FN KN + R+
Sbjct: 146 KEILEASEGGNPGEVAAAIEVAMARIYHMGAPGEQKKDYMAKYRQLSFNLK--KNGDLRQ 203
Query: 101 KVLLGDVKPETIVNMTAKEMASDKMQLW--------YENSRKGRAETNGRIFSGLVSPKN 152
+L V + ++ M+A+E+A+++ + ++ +R AE N +
Sbjct: 204 NLLDDSVSGDQLIKMSAEELATEEKRAQIEKLRDDAFQEARLDWAEANHEKIQKQTGTEG 263
Query: 153 IVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G+ C RC + S P+ + C NC W
Sbjct: 264 -TKGLFTCGRCKSSKTSNTQKQTRSADEPMTVFVMCHNCGNRW 305
>gi|392340808|ref|XP_003754176.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 663
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N F KV DV P+ +V M++ +
Sbjct: 88 IAEGIEAALFHLTQDTNLRYKSKYRNLLFNLRDPRNDLFL-KVAHCDVTPKDLVQMSSIQ 146
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + ++
Sbjct: 147 LAPKELSRWRDQEKR 161
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 58 IQVAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ VA +E A Y K+ +S YK + R L N + N RK+VL G+++PE V M+
Sbjct: 166 MAVAREVELAAYNKYQPETSAPYKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMS 225
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
++E+ S + + E R E + + + + C +CG K++S+
Sbjct: 226 SEELMSAERRAEAE-----RLEKENMNKAMVAQAERSISTSLTCGKCGQKKVSYSQAQTR 280
Query: 172 ----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 281 SADEPMTTFCECTVCGNRW 299
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+ S+E AMY+ G +E YK + R +LFN KN R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 115 MTAKEMASDKMQ 126
M++++MAS+++Q
Sbjct: 383 MSSQDMASEELQ 394
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK-----MQLWYE 130
S YK K R L+FN D N R+ V+ G++ + M ++MAS++ +L E
Sbjct: 265 SNGYKIKMRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEERKAQDRKLAEE 324
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
N K R P+ +C+RCG ++ ++ P+ +TC+N
Sbjct: 325 NLFKARG----------AGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVN 374
Query: 182 CYQYW 186
C W
Sbjct: 375 CNCRW 379
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
S Y+ K R L N D N R +++LG V P+ +V M+ +EMAS+ ++L E
Sbjct: 193 SGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEK--- 249
Query: 135 GRAETNGRIFS----GLVSPKNIVYGICKCSRCGHKRMSFIPLRRH-----ITCLNC 182
AE N +F G+ + + KCSRC ++ ++ ++ +TC C
Sbjct: 250 -LAEKN--LFKAKAVGVTQAETDAF---KCSRCQQRKCTYYQMQTRSADEPMTCGGC 300
>gi|392348387|ref|XP_003750093.1| PREDICTED: SPOC domain-containing protein 1-like [Rattus
norvegicus]
Length = 768
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A++ ++ YK KYR LLFN DP+N F KV DV P+ +V M++ +
Sbjct: 193 IAEGIEAALFHLTQDTNLRYKSKYRNLLFNLRDPRNDLFL-KVAHCDVTPKDLVQMSSIQ 251
Query: 120 MASDKMQLWYENSRK 134
+A ++ W + ++
Sbjct: 252 LAPKELSRWRDQEKR 266
>gi|448518329|ref|XP_003867941.1| Dst1 protein [Candida orthopsilosis Co 90-125]
gi|380352280|emb|CCG22505.1| Dst1 protein [Candida orthopsilosis]
Length = 300
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
I +A +ES +++ ++ + ++ Y+ K R N + KN E R++VL + + MT
Sbjct: 164 ITIASEIESEVFKSEYSKVNDAYRNKLRSFTMNLRNKKNPELRERVLSKQITASQFIKMT 223
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 224 PNEMAPEALKKEIEKLHKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 277
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 278 RSADEPLTTFCTCENCGNRW 297
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD 123
M + ++ G + YK + R + N D KN + R+ VL G + P+ I MT++EMASD
Sbjct: 1 MPARIFRDVGNTDMKYKNRVRSRIANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASD 60
Query: 124 KMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMS 169
+++ + E R+ + G + L + CS+C K R S
Sbjct: 61 ELKEIRKAMTKEAIREHQMARTGGTQTDLFT----------CSKCRKKNCTYTQVQTRSS 110
Query: 170 FIPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 111 DEPMTTFVVCNECGNRW 127
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK + R + N D KN E +K VL G + PE I MT++EMAS++++ + K
Sbjct: 170 YKNRVRSRISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEAIR 229
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+ +G G CK C + R S P+ + C C W
Sbjct: 230 EHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSSDEPMTTFVVCNECGNRW 281
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
I VA +E+A Y G ++ YK K R L N + N RK VL G ++P+ V M+
Sbjct: 166 ITVAKHVEAAAYGNAGSVNDAYKQKMRSLFQNLKNKSNPALRKDVLSGKIQPKKFVVMSH 225
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
EM SD + E+ + + N + + + + + +C +C K +S+
Sbjct: 226 DEMKSDSRR--AEDEKLEKENMNQAMVAQV---EKSISKEFQCGKCKKKMVSYSQAQTRS 280
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 281 ADEPMTTFCECMNCGNRW 298
>gi|396472195|ref|XP_003839048.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
gi|312215617|emb|CBX95569.1| similar to transcription elongation factor s-ii [Leptosphaeria
maculans JN3]
Length = 304
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 58/137 (42%), Gaps = 16/137 (11%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+A Y G ++ YK K R L N + N + RK+V GD+ + V MT E
Sbjct: 171 IAKQVEAAAYTNAGSINDAYKAKMRSLFQNLKNKTNPQLRKRVFSGDISAKRFVVMTHDE 230
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSP-KNIVYGICKCSRCGHKRMSFI------- 171
M SD E + + I +V+ + + +C +C K +S+
Sbjct: 231 MKSD------ERRAEDKILEQENINQAMVAQVEKAISKEFQCGKCKQKMVSYSQAQTRSA 284
Query: 172 --PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 285 DEPMTTFCECMNCGNRW 301
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +Y++ + YK + R + N DPKN RK VL G + I +M+A+E
Sbjct: 353 MAAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTLALSRIASMSAEE 412
Query: 120 MASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSF 170
MASD+++ L E R+ + G + L+ G CK C + R +
Sbjct: 413 MASDELKQLRNTLTQEAIREHQMAKTGGTSTDLLQ-----CGKCKKKNCTYNQVQTRSAD 467
Query: 171 IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 468 EPMTTFVLCNECGNRW 483
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 59/136 (43%), Gaps = 14/136 (10%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+ +E +Y++ + YK + R + N DPKN RK VL G ++ I M+A+E
Sbjct: 487 MGAEIEDHIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGSIELRRIATMSAEE 546
Query: 120 MASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG----HKRMSF 170
MASD+++ L E R+ + G + L + G CK C R +
Sbjct: 547 MASDELKQLRNVLTQEAIREHQMAKTGGTTTDL-----LQCGKCKKKNCTYNQVQTRSAD 601
Query: 171 IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 602 EPMTTFVLCNECGNRW 617
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 50.8 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPI---------QVAISMESAMYEKW- 72
++ + R+N+ AL K+ +E A + + Q P + +++E +MY+
Sbjct: 279 LQSLARRNVANALVKLFVEQA--ASALQQGAYSMPAGKTKEAVGEALGVAIEHSMYKHLC 336
Query: 73 ---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+T+ M+ ++MAS +++
Sbjct: 337 GGSGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELR 391
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 24/125 (19%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK-----MQLWYE 130
S YK K R L+FN D N R+ V+ G++ + M ++MAS++ +L E
Sbjct: 265 SNGYKIKMRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEERKAQDRKLAEE 324
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
N K R P+ +C+RCG ++ ++ P+ +TC+N
Sbjct: 325 NLFKARG----------AGPQQAETDAFRCARCGQRKCTYYQMQTRSADEPMTTFVTCVN 374
Query: 182 CYQYW 186
C W
Sbjct: 375 CNCRW 379
>gi|259482276|tpe|CBF76603.1| TPA: transcription elongation factor S-II (AFU_orthologue;
AFUA_3G07670) [Aspergillus nidulans FGSC A4]
Length = 304
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 14/121 (11%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
+ E Y+ K R L N + N R +VL +V PE V MT +E+ SD+ + E RK
Sbjct: 187 TKEPYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQR---EKDRK 243
Query: 135 GRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQY 185
+ E + + + + +C +CG +++++ P+ TC++C +
Sbjct: 244 IQKENMDKAM--VAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMHCGKS 301
Query: 186 W 186
W
Sbjct: 302 W 302
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
++G ++ YK + R + N D KN R VL G + P+ I MTA EMASD+M+ +
Sbjct: 133 EFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGAIDPDRIARMTADEMASDEMKQMRQ 192
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHITCLNCYQYW 186
K + +G + G C+ S C + R + P+ C C W
Sbjct: 193 KFTKEAINDHQMAVTGGTKTDLLKCGKCRKSNCTYNQVQTRSADEPMTTFCYCNECGHRW 252
>gi|294656076|ref|XP_458316.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
gi|199430838|emb|CAG86394.2| DEHA2C14564p [Debaryomyces hansenii CBS767]
Length = 290
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ V+ +E+ +++ ++ ++ Y+ K R N + KN + R ++L +KP + MT
Sbjct: 154 LAVSRDIENEVFKAEYSSVNDNYRNKLRTFTMNLRNKKNPDLRDRLLTNKIKPSNFIKMT 213
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 214 PNEMAPESLKKEIEKLHK------QNLFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 267
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 268 RSADEPLTTFCTCENCGNRW 287
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+Y++ + YK + R + N D KN RK VL G++ P+ MTA+
Sbjct: 43 ELGSQIEEAIYQEIRNTDMKYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAE 102
Query: 119 EMASDK 124
EMASD+
Sbjct: 103 EMASDE 108
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD + N ++ +E ++ G + YK
Sbjct: 110 DAVRNKCREMLTLAL-----QTDHDHVAV----GVNCEHLSSQIEECIFLDVGNADMKYK 160
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 161 NRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 220
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G C+ C + R S P+ ++ C C W
Sbjct: 221 QMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 270
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 14/117 (11%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSR 133
Y+ + R + N DPKN R+ VL G + P I MTA+EMASD+++ + E R
Sbjct: 287 YRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASDELKELRNAMTQEAIR 346
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHITCLNCYQYW 186
+ + G + L G CK C + R + P+ + C C W
Sbjct: 347 EHQMAKTGGTVTDLFQ-----CGKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 398
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL + HD + N ++ +E ++ G + YK
Sbjct: 136 DAVRNKCREMLTLAL-----QTDHDHVAV----GVNCEHLSSQIEECIFLDVGNTDMKYK 186
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R+ VL G + P+ I MT++EMASD+++ + K +
Sbjct: 187 NRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREH 246
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
+G C+ C + R S P+ ++ C C W
Sbjct: 247 QMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 296
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E ++ ++ + YK + R + N D KN R+ VL G+V P+ I MTA+
Sbjct: 175 ELGAQIEECIFLEFKNTDMKYKNRVRSRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAE 234
Query: 119 EMASDKMQLWYEN 131
EMASD+++ +N
Sbjct: 235 EMASDELKEMRKN 247
>gi|344304668|gb|EGW34900.1| hypothetical protein SPAPADRAFT_131482 [Spathaspora passalidarum
NRRL Y-27907]
Length = 296
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 58 IQVAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+++A +ES +++ ++ + +++Y+ K R N + KN E R+++L + + MT
Sbjct: 160 LKIASEIESEVFKSEYSKVTDSYRNKLRSFTMNLRNKKNPELRERLLTQAILAANFIKMT 219
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---- 171
EMA + ++ E K +F + K V C +C HK++S+
Sbjct: 220 PSEMAPESLKKEIEKLNKQN------LFDAQGATEKRAVTDRFTCGKCKHKKVSYYQMQT 273
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 274 RSADEPLTTFCTCENCGNRW 293
>gi|408389619|gb|EKJ69057.1| hypothetical protein FPSE_10756 [Fusarium pseudograminearum CS3096]
Length = 308
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ AI++E+A + K+ + YK K R L N + N E K VL G++ PE V M+
Sbjct: 173 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 232
Query: 118 KEMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
E+ S+ +++L EN + + + S + +C +C K++S+
Sbjct: 233 DELKSEEQRKKELELEKENMKMAQVPQEQKSISESL----------ECGKCKKKQVSYTQ 282
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C+ C W
Sbjct: 283 AQTRAADEPMTTFCECMACGNRW 305
>gi|46108040|ref|XP_381078.1| hypothetical protein FG00902.1 [Gibberella zeae PH-1]
Length = 307
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ AI++E+A + K+ + YK K R L N + N E K VL G++ PE V M+
Sbjct: 172 VNKAITVENAAFVKFKGETADYKKKIRSLFTNLKNKSNKELGKSVLSGEISPEKFVVMSD 231
Query: 118 KEMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
E+ S+ +++L EN + + + S + +C +C K++S+
Sbjct: 232 DELKSEEQRKKELELEKENMKMAQVPQEQKSISESL----------ECGKCKKKQVSYTQ 281
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C+ C W
Sbjct: 282 AQTRAADEPMTTFCECMACGNRW 304
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T P A V C D +R R+ L AL HD + C + I E
Sbjct: 101 TTFPPAP--VTC-DAVRNKCREMLAAAL-----RTDHDHMAVGA--DCEGLSAQI--EEC 148
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ G + YK + R + N D KN + R+ VL G + P+ I MT++EMASD+++
Sbjct: 149 IFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELK 207
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ- 126
+Y++ + YK + R + N DPKN RK VL G + I +M+A+EMASD+++
Sbjct: 299 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDELKQ 358
Query: 127 ----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHIT 178
L E R+ + G + L+ G CK C + R + P+ +
Sbjct: 359 LRNTLTQEAIREHQMAKTGGTTTDLLQ-----CGKCKKKNCTYNQVQTRSADEPMTTFVL 413
Query: 179 CLNCYQYW 186
C C W
Sbjct: 414 CNECGNRW 421
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 228 KMASEIEDHIYQELKGTDMKYRNRVRSRISNLKDPRNPSLRRNVLCGAISTSLIARMTAE 287
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 288 EMASDELKELRSAMTLEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 337
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 338 QTRSADEPMTTFVLCNECGNRW 359
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A ++E+++ + YK K R L N D N R+ ++ G+++ E MT++EM
Sbjct: 162 AKAIEASVLADCDGVTAAYKSKIRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEM 221
Query: 121 ASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFI 171
AS++ + K RAE + + + +CSRC + R +
Sbjct: 222 ASEERKAA---DNKIRAENFHNSLAA--AEQQAETDAFQCSRCKQRKCRYRQAQTRSADE 276
Query: 172 PLRRHITCLNCYQYW 186
P+ +TC NC W
Sbjct: 277 PMTTFVTCTNCGNRW 291
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 213 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE 272
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 273 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 322
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 323 QTRSADEPMTTFVLCNECGNRW 344
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 191 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE 250
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 251 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 300
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 301 QTRSADEPMTTFVLCNECGNRW 322
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 84 RRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN 131
R ++FN D N +FR+++LLG +KPE +V+MT +MAS++ + E
Sbjct: 1 RSIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRKKETEG 48
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y++ + YK + R + D KN RK VL G++ P+ MTA+EMASD+++
Sbjct: 153 IYQEIRNTDMKYKNRVRSRISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKE 212
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCY 183
+N K + +G G CK C + R + P+ + C C
Sbjct: 213 MRKNLTKEAIREHQMAKTGGTQTDLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECG 272
Query: 184 QYW 186
W
Sbjct: 273 NRW 275
>gi|380804173|gb|AFE73962.1| death-inducer obliterator 1 isoform b, partial [Macaca mulatta]
Length = 243
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 42 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 99
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
++FN DPKN +VL ++ +V + +E+ S ++ W E + E+ ++
Sbjct: 100 IMFNLKDPKNQGLFHRVLREEISLAKLVRLKPEELVSKELSTWKERPTRSVMESRTKL 157
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 25/142 (17%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
N ++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I M
Sbjct: 216 NCDKMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISSGLIAKM 275
Query: 116 TAKEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVS-----PKNIVYGICK------ 159
TA+EMASD+++ + E R+ + G + L+ KN Y +
Sbjct: 276 TAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQMQTRSADE 335
Query: 160 -------CSRCGH--KRMSFIP 172
C+ CGH K MS IP
Sbjct: 336 PMTTFVLCNECGHRWKVMSLIP 357
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 16/136 (11%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A ++ESA+ ++ S YK K R L N D N R+ ++ GD+ E M++ EM
Sbjct: 166 ARAIESAVVAQFSGPSVEYKSKIRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAEM 225
Query: 121 ASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY------GICKCSRC----GHKRMSF 170
AS++ + +N K E N F L + + G CK +C R +
Sbjct: 226 ASEERKA-ADNKIK---EDN--FFKSLGAAEQEAETDAFQCGRCKQRKCRYRQAQTRSAD 279
Query: 171 IPLRRHITCLNCYQYW 186
P+ +TC+NC W
Sbjct: 280 EPMTTFVTCVNCGNRW 295
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+ S+E AMY+ G +E YK + R +LFN KN R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 115 MTAKEMASDKM 125
M++++MAS+++
Sbjct: 383 MSSQDMASEEL 393
>gi|170057596|ref|XP_001864553.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167877015|gb|EDS40398.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 895
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAI-----SMESAMYEKWGRSSE 77
IR V+K L L + + E DK+ Q+ A + I +E M+ + + +
Sbjct: 307 IRVTVKKTLKEHLLQRTSELDEDKSGA-QLLAVRLSESEIDAFVAEVEEEMFGMFNKDTG 365
Query: 78 T-YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
T Y+ KYR L+FN D KN +K+ ++ +V MT +E+AS ++ W EN K +
Sbjct: 366 TKYRAKYRSLVFNIKDRKNLSLFQKICEKRIEARQLVRMTPEELASQELAQWRENENKHQ 425
Query: 137 AE 138
E
Sbjct: 426 LE 427
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 186 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 245
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 246 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 295
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 296 QTRSADEPMTTFVLCNECGNRW 317
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 49.3 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 59 QVAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
Q+ S+E AMY+ G +E YK + R +LFN KN R ++L+G + P+ +
Sbjct: 325 QLGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSK 382
Query: 115 MTAKEMASDKM 125
M++++MAS+++
Sbjct: 383 MSSQDMASEEL 393
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 193 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 252
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 253 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 302
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 303 QTRSADEPMTTFVLCNECGNRW 324
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
++ +E ++ G + YK + R + N D KN R+ VL G + P+ I MT++E
Sbjct: 166 LSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEE 225
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MASD+++ + K + +G C+ C + R S P+
Sbjct: 226 MASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTT 285
Query: 176 HITCLNCYQYW 186
++ C C W
Sbjct: 286 YVVCNECGNRW 296
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
++E +Y+++ ++ Y K RRL N D KN R+ V+ GD+ E V MT +EMAS
Sbjct: 204 AIEYQVYKEFDGVTKEYSTKMRRLFNNLKDKKNPGLREAVVSGDISAEKFVKMTPEEMAS 263
Query: 123 DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRC 163
++ + +NS A + + +G + + +C RC
Sbjct: 264 EERK--QQNSALNEANVHAALGAGEPEAETDAF---QCGRC 299
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|171687673|ref|XP_001908777.1| hypothetical protein [Podospora anserina S mat+]
gi|170943798|emb|CAP69450.1| unnamed protein product [Podospora anserina S mat+]
Length = 295
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+++A+ +E+A + + + Y+ K R L+ + N K+V G + P+T V MT
Sbjct: 160 VRLAMEVEAAAFRVFKGDTPEYRQKIRGLMTSLKRKDNPALGKRVRSGAITPDTFVKMTD 219
Query: 118 KEMASDKM-----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
E+ASD +L EN +K + ++ K+I + KC +CG K++S+
Sbjct: 220 VELASDAQRAEDEKLQQENMKKAQVP---------MAEKSISDAL-KCGKCGQKKVSYSQ 269
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 270 AQTRSADEPMTTFCECTVCGNRW 292
>gi|225682198|gb|EEH20482.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 897
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIE---AAHDKNVID----QVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E +A + Q K + +++E AMY+
Sbjct: 281 LQSVPRRNVANALVKLFVEQAASAQQQGTFTMPPGQTKEAVGESLGLAIEHAMYKHLSGG 340
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ +MAS +++
Sbjct: 341 TGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELR 393
>gi|226290806|gb|EEH46271.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 872
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIE---AAHDKNVID----QVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E +A + Q K + +++E AMY+
Sbjct: 256 LQSVPRRNVANALVKLFVEQAASAQQQGTFTMPPGQTKETVGESLGLAIEHAMYKHLSGG 315
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ +MAS +++
Sbjct: 316 TGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELR 368
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 59 QVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
QVA +E +++ + YK KYR L+FN DPKN ++++ + P+ +V M+
Sbjct: 1739 QVAKEIEESLFSLYKHDVGSKYKNKYRSLIFNIKDPKNPGLFREIITKQLLPDELVKMST 1798
Query: 118 KEMASDKMQLWYENSRK 134
+++A+ + W E K
Sbjct: 1799 EDLANKDLAEWREKEAK 1815
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
S Y+ K R L N D N R +++LG V P+ +V M+ +EMAS+ ++L E
Sbjct: 200 SGNEYRAKMRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEKL-- 257
Query: 135 GRAETNGRIFS----GLVSPKNIVYGICKCSRCGHKRMSF 170
AE N +F G+ + + KCSRC ++ ++
Sbjct: 258 --AEKN--LFKAKAVGVTQAETDAF---KCSRCQQRKCTY 290
>gi|295658648|ref|XP_002789884.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282845|gb|EEH38411.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 898
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIE---AAHDKNVID----QVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E +A + Q K + +++E AMY+
Sbjct: 280 LQSVPRRNVANALVKLFVEQAASAQQQGTFTMPPGQTKETVGESLGLAIEHAMYKHLSGG 339
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ +MAS +++
Sbjct: 340 TGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALSTMSTHDMASKELR 392
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 214 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 273
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 274 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 323
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 324 QTRSADEPMTTFVLCNECGNRW 345
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 62 ISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMA 121
+ + S +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+EMA
Sbjct: 201 LELRSHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMA 260
Query: 122 SDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
SD+++ + E R+ + G + L +CS+C K R
Sbjct: 261 SDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQVQTR 310
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 311 SADEPMTTFVLCNECGNRW 329
>gi|157115423|ref|XP_001652602.1| hypothetical protein AaeL_AAEL007181 [Aedes aegypti]
gi|108876924|gb|EAT41149.1| AAEL007181-PA, partial [Aedes aegypti]
Length = 1504
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
Y+ KYR L+FN DPKN +K+ + + + MT +E+AS ++ W EN K + E
Sbjct: 745 YRAKYRTLVFNIKDPKNLSLFQKICEKRIGAKQLARMTPEELASQELAQWRENENKHQLE 804
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
+++ Y+ K R LLFN D KN KK+L G++ + +V M+ +++AS ++ W E + K
Sbjct: 447 TNQKYRVKCRSLLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLASRELAEWREKTIK 506
Query: 135 GRAE 138
E
Sbjct: 507 KELE 510
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 215 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 274
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 275 EMASDELKELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 324
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 325 QTRSADEPMTTFVLCNECGNRW 346
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 254 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 313
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 314 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 363
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 364 QTRSADEPMTTFVLCNECGNRW 385
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 215 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 274
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 275 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 324
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 325 QTRSADEPMTTFVLCNECGNRW 346
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL D VID +P ++A +E A+Y ++ + YK
Sbjct: 148 DAVRLKCRELLIAALR-------VDGKVIDSC--ASPEELAEELEEAIYGEFKNTDNRYK 198
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R L+G + P + MTA+EMASD+++ E +K
Sbjct: 199 NRVRSRIANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAIND- 257
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ L + + + KC +C + R + P+ + C C W
Sbjct: 258 ----AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 308
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 65 ESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
++ +Y++ + Y+ + R + N DP+N R+ VL G + P I MTA+EMASD+
Sbjct: 8 QTHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDE 67
Query: 125 MQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF 170
++ + E R+ + G + L+ +CS+C K ++
Sbjct: 68 LRELRNAMTQEAIREHQMAKTGGTTTDLL----------RCSKCKKKNCTY 108
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD 123
+E ++ G + YK + R + N D KN + R+ VL G + P+ I MT++EMASD
Sbjct: 3 IEECIFRGVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASD 62
Query: 124 KMQ 126
+++
Sbjct: 63 ELK 65
>gi|302927325|ref|XP_003054473.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735414|gb|EEU48760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 303
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
I A+S+E A Y + + YK K R L N + N + ++V+ GD+ + V MT
Sbjct: 168 IAKAVSVEHAAYTRNKGETPEYKKKIRSLFTNLKNKSNKDLGRRVMSGDISADRFVVMTD 227
Query: 118 KEMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
E+ S+ +++L EN +K + ++ K+I + +C RC K++S+
Sbjct: 228 DELKSEDQRKKEVELEKENMKKAQVP---------MAEKSISEDL-QCGRCKKKQVSYTQ 277
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C+ C W
Sbjct: 278 AQTRAADEPMTTFCECMACGHRW 300
>gi|158293023|ref|XP_314320.4| AGAP004866-PA [Anopheles gambiae str. PEST]
gi|157016907|gb|EAA09679.4| AGAP004866-PA [Anopheles gambiae str. PEST]
Length = 2109
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
Y+ KYR L+FN D KN +K+ ++P+ +V MTA E+AS ++ W E K + E
Sbjct: 1308 YRAKYRSLVFNIKDRKNLSLFQKISEKLIEPKQLVRMTADELASQELAQWREKEAKHQLE 1367
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 16/151 (10%)
Query: 45 DKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLL 104
D VID +P ++A +E A+Y ++ + YK + R + N D KN R L+
Sbjct: 142 DGKVIDG--CASPEELAEELEEAIYAEFKNTDSRYKNRVRSRVANLRDVKNPNLRTNFLV 199
Query: 105 GDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCG 164
G + P + MTA+EMASD+++ E +K + L + + + KC +C
Sbjct: 200 GAITPARLAVMTAEEMASDEIKQLREQFKKEAIND-----AQLATVQGTKTDLLKCGKCK 254
Query: 165 HK---------RMSFIPLRRHITCLNCYQYW 186
+ R + P+ + C C W
Sbjct: 255 KRNCTYNQVQTRSADEPMTTFVLCNECGNRW 285
>gi|47229319|emb|CAG04071.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3036
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 13 ASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW 72
+S+ + N+ IR+ ++K+L L K + K +V +++ S+E M+ +
Sbjct: 2102 SSRPSQPNNQIRQSIQKSLVSILVKRVGDCEDLKTSESEV-----VKLVASIEVEMFNIF 2156
Query: 73 GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
+ Y KYR ++FN DP+N + G++ P +V MT K+M + K
Sbjct: 2157 RNTDSKYMNKYRTIMFNLKDPRNKGLLYGFVRGEISPFRLVRMTQKDMQAIK 2208
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 61/142 (42%), Gaps = 24/142 (16%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 358 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPSLRRNVLSGTISAGLIAKMTAE 417
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------- 166
EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 418 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQV 467
Query: 167 --RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 468 QTRSADEPMTTFVLCNECGNRW 489
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
YK K R L+FN D N + R +V +G+V PE + +MT +++AS ++ W
Sbjct: 2 YKEKARSLVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKELSQW 51
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 56/122 (45%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++ +E A+++++ + YK + R + N D KN R+ VL G++ + M+A+
Sbjct: 84 ELGAQIEEAVFQEFKNTDAKYKNRVRSRIANLKDAKNPNLRRNVLCGNIATDRFARMSAE 143
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPLRRHIT 178
EMASD+++ +N K + +G G CK C + ++ +T
Sbjct: 144 EMASDELKEMRKNLTKEAIREHQMARTGGTQTDLFSCGKCKKKNCTYTQVQTRSADEPMT 203
Query: 179 CL 180
L
Sbjct: 204 TL 205
>gi|440635961|gb|ELR05880.1| transcription elongation factor S-II [Geomyces destructans
20631-21]
Length = 301
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+ +E A + K+ + Y+ K R L N + +N E +VL G++ + V MT E+
Sbjct: 169 AMEVEKAAFTKYKGDTPEYRAKMRSLFQNLKNKQNKELGPRVLSGEIPADKFVIMTHDEL 228
Query: 121 AS-----DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
S + +L +N ++ + R S + KC RCG K++S+
Sbjct: 229 KSAERKKEDDELQKDNMKRAQVPMAERSISDAL----------KCGRCGQKKVSYSQAQT 278
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 279 RSADEPMTTFCECTVCGNRW 298
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 73 GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENS 132
G + YK + R + N D KN R+ VL G + P+ I MT++EMASD+++ +
Sbjct: 178 GNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAM 237
Query: 133 RKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYW 186
K + +G C+ C + R S P+ ++ C C W
Sbjct: 238 TKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW 295
>gi|403220912|dbj|BAM39045.1| transcription elongation factor [Theileria orientalis strain
Shintoku]
Length = 319
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 64 MESAMYEKW---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
+E+A+Y+ + + + Y + + + FNF D KN F KV G + +V M++ +M
Sbjct: 182 IENALYDHYVVNKNAQKEYNLQLKCISFNFKDIKNTFFNYKVYSGAIPVSELVTMSSLQM 241
Query: 121 ASD--KMQ--LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----- 171
ASD KMQ + E S + +++ I + ++ K+ G KC +C ++ ++
Sbjct: 242 ASDEKKMQRSVILEQSLEA-CQSDWAIKNIFLNQKS--KGQFKCGKCNSRQTTYYQLQTR 298
Query: 172 ----PLRRHITCLNCYQYW 186
P+ +TCLNC W
Sbjct: 299 SSDEPMTTFVTCLNCKNRW 317
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNV-------IDQVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E A + K + +++E AMY+
Sbjct: 256 LQSVARRNVANALVKLFVEQAALAQQQGTYTMPAGKTKEAVGEPLGLAIELAMYKHLCGG 315
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ ++MAS +++
Sbjct: 316 AGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELR 368
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNV-------IDQVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E A + K + +++E AMY+
Sbjct: 256 LQSVARRNVANALVKLFVEQAALAQQQGTYTMPAGKTKEAVGEPLGLAIELAMYKHLCGG 315
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ ++MAS +++
Sbjct: 316 AGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELR 368
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 13/115 (11%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNV-------IDQVKACNPIQVAISMESAMYEKW--- 72
++ + R+N+ AL K+ +E A + K + +++E AMY+
Sbjct: 280 LQSVARRNVANALVKLFVEQAALAQQQGTYTMPAGKTKEAVGEPLGLAIELAMYKHLCGG 339
Query: 73 -GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
G SE YK + R +LFN KN R +L+G + P+ + M+ ++MAS +++
Sbjct: 340 AGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDALATMSTQDMASKELR 392
>gi|294883920|ref|XP_002771106.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
gi|239874344|gb|EER02922.1| transcription elongation factor SII, putative [Perkinsus marinus
ATCC 50983]
Length = 308
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 31/192 (16%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGAL-SKVSIEAAHDKNVIDQVKACNPIQVAISMES 66
T++ +V +C D R+ +R L+ AL + + E A P A+ +E
Sbjct: 132 TDLTSVMEVARCGDPKRDKIRNLLFKALRPRRNPEEAE------------PAVRAVEIEE 179
Query: 67 AMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ K S Y + R + +N D N +F+ KVL+G + +T+++MAS+
Sbjct: 180 ECHSKL--SEREYLSQIRSIKYNLTDSSNPDFQWKVLVGLFPRDKYSTLTSEDMASEAKN 237
Query: 127 LWYENSRKGRAE---TNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLR 174
N+ K E ++ + G + G+ +C +C + ++ P+
Sbjct: 238 QHRANAAKAALEECQSDWAMRHGAIQKS----GMFQCGKCRKSQTTYFQMQTRSSDEPMT 293
Query: 175 RHITCLNCYQYW 186
+TCLNC W
Sbjct: 294 TFVTCLNCGNKW 305
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 4/117 (3%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK + R + N D KN R++VL G + P+ I MT++EMASD+++ + K
Sbjct: 3 YKNRVRSRISNLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKEAIR 62
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRRHITCLNCYQYWASTNP 191
+ +G G C+ C + R S P+ + C C W +P
Sbjct: 63 EHQMARTGGTQTDLFTCGKCRKKNCTYTQVQTRSSDEPMTTFVVCNECGNRWKWASP 119
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+ +E +Y++ + YK + R + N DPKN R+ VL G ++ I +M+A+E
Sbjct: 387 MGAEIEDYIYQEIKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEE 446
Query: 120 MASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-------- 166
MASD+++ L E R+ + G + L+ +C +C K
Sbjct: 447 MASDELKQLRNVLTQEAIREHQMAKTGGTTTDLL----------QCGKCNKKNCTYNQVQ 496
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 497 TRSADEPMTTFVLCNECGYRW 517
>gi|410080934|ref|XP_003958047.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
gi|372464634|emb|CCF58912.1| hypothetical protein KAFR_0F03160 [Kazachstania africana CBS 2517]
Length = 323
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKN---------LYGALSKVSIEAAHDKNVIDQVKACN 56
F + P+ SK ND + IV +N LY AL+K E+ H N I
Sbjct: 140 FVSTKPRNSK----NDGVNTIVHENKLRDSVIRALYDALAK---ESQHPPNSI------- 185
Query: 57 PIQVAISMESAMYEKWGR--SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
++++I +E+ M + + + + YK KYR + N N + + K+ GD+ P +VN
Sbjct: 186 -LKLSIEIEAEMNKSYDSIANEKQYKEKYRIIYSNLISKNNSDLKFKITNGDITPVHLVN 244
Query: 115 MTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
KE+A + ++ E R E N G +++ C +C K++S+
Sbjct: 245 CDPKELAPEPLRKKIEEIR----EKNLFNAQGATIERSVTDRFT-CGKCKEKKVSYYQLQ 299
Query: 172 ------PLRRHITCLNCYQYW 186
PL TC C W
Sbjct: 300 TRSADEPLTTFCTCEVCGNRW 320
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
+A +E+A+++ + YK KYR LLFN DP+N + KVL GDV P +
Sbjct: 133 IAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLKVLHGDVTPHDL 185
>gi|50286491|ref|XP_445674.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524979|emb|CAG58585.1| unnamed protein product [Candida glabrata]
Length = 306
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 31/180 (17%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSS--- 76
N+ +R+ V + LY AL+K ++ H I +Q +I++E M+ K SS
Sbjct: 142 NNKLRDQVIRALYDALAK---DSEHPPKSI--------LQTSIAIEEEMH-KLNDSSIKE 189
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
+ YK KYR + N N + + K+ GD+ PE +VN K++A + ++ E +K
Sbjct: 190 KEYKDKYRVIYSNIISRNNPDLKVKIANGDLSPEQLVNSDPKDLAPEHLKKKMEEIKK-- 247
Query: 137 AETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+F+ + + V C +C K++S+ PL TC C W
Sbjct: 248 ----QNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 303
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 18/125 (14%)
Query: 73 GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENS 132
G++ Y+ + R L N D N + R VL ++ P+ + MT+ E+AS E+
Sbjct: 173 GKTGSEYRNRMRSLYMNLKDKNNPKLRASVLRNEITPQRLSTMTSAELAS-------EDR 225
Query: 133 RKGRA--ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
RK A E + P+ V + C +C K++S+ P+ C
Sbjct: 226 RKEDAKLEQENLFHAQGAKPQKAVTDLFTCGKCKQKKVSYYQMQTRSADEPMTTFCECTV 285
Query: 182 CYQYW 186
C W
Sbjct: 286 CGNRW 290
>gi|19075622|ref|NP_588122.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe 972h-]
gi|59800464|sp|Q9Y7V2.3|BYE1_SCHPO RecName: Full=Transcription factor bye1
gi|4539285|emb|CAB39909.1| transcription elongation regulator (predicted) [Schizosaccharomyces
pombe]
Length = 721
Score = 47.4 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKAC---NPIQVAISMESAMYEKWGRSSE 77
D I+ VRK++ A V E +K ++ V+ N +A+ +E M+ +++
Sbjct: 211 DEIQNPVRKSVAKAWVSV-FEKIIEKAKLEGVQGLEDLNSTSLALQLEHIMFMVLSYTTD 269
Query: 78 -------TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
Y+ K+R L FN D KN FR +VL ++ +VN++++EMA+ ++ E
Sbjct: 270 HSLTPNNKYREKFRALRFNLVDDKNPAFRARVLKNEISFNDLVNLSSEEMANPDLKNLAE 329
Query: 131 NSRKGRAETNGRIFSGLVSPKN 152
R+ E N I L++P++
Sbjct: 330 EIRQQSTE-NTVIKQHLIAPRD 350
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
YK + R + N D KN E R+ VL G + P+ I MT++EMASD+++
Sbjct: 157 YKNRVRSRISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDELK 204
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 55 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAE 114
Query: 119 EMASDKMQ 126
EMASD+++
Sbjct: 115 EMASDELR 122
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 15/147 (10%)
Query: 50 DQVKAC-NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVK 108
DQV C +P +A +E A++ ++ + YK + R + N DPKN R L+G +
Sbjct: 145 DQVDGCGSPEDLAEELEEAIFNEFRNTDIKYKNRIRSRVANLKDPKNPNLRMNYLIGALP 204
Query: 109 PETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK-- 166
+ MTA+E+ASD+M+ + +K + L + + + KC +C +
Sbjct: 205 ASRLAVMTAEELASDEMKQIRDKFKKEAIND-----AQLATVQGTKTDLLKCGKCKKRNC 259
Query: 167 -------RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 260 TYNQVQTRSADEPMTTFVLCNECGNRW 286
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 33/48 (68%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
YK + R N DP+N E R++++ G++ P+ + M+A+EMASD+++
Sbjct: 12 YKNRVRSRAANLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVK 59
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 6/131 (4%)
Query: 9 NVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAM 68
+ P + D IRE VRK L ++ E K ++++ Q A E +
Sbjct: 983 DTPDRRSRMSSEDPIRENVRKALQEQIASRMAEYDGPKFTEEEIQ-----QFAYDTELEL 1037
Query: 69 YEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+E + R YK KYR L+FN D KN +K+ + P+ +V + +E+AS ++
Sbjct: 1038 HELFNRDVGMKYKAKYRSLMFNIKDRKNLSLWEKICEKVITPKQLVRFSPEELASQELAQ 1097
Query: 128 WYENSRKGRAE 138
W + K + E
Sbjct: 1098 WRDKEAKHQLE 1108
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y++ + Y+ + R + N D KN R+ VL G + E I M A+
Sbjct: 209 KMASEIEDHIYQELKSTDMKYRNRVRSRISNLKDSKNPGLRRNVLSGAISTELIAKMMAE 268
Query: 119 EMASDKM-QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI----PL 173
EMASD++ +L +++ E SG + + G CK C + ++ + P+
Sbjct: 269 EMASDELRELRNAMTQEAIREHQMAKTSG-TNTDLLQCGKCKKKNCTYNQVQTLSADEPM 327
Query: 174 RRHITCLNCYQYW 186
+ C C W
Sbjct: 328 TTFVLCNECGHRW 340
>gi|213404362|ref|XP_002172953.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
gi|212001000|gb|EEB06660.1| transcription elongation regulator [Schizosaccharomyces japonicus
yFS275]
Length = 698
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRS------- 75
+R+ V K AL K +E ++ +K + ++ A+ +E M+ +
Sbjct: 173 VRQSVAKAWLSAL-KSMVEKCKTESA--NLKFPDLVEFALQLERTMFIELSYKIDGNAIP 229
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
++ Y+ K+R + FN D +N R + G++ P +V+MT++EMA+ ++++ E R+
Sbjct: 230 NKAYRDKFRNIKFNLTDDRNPHLRASLFKGEITPVQLVHMTSEEMANPDLKVFAEQIRQQ 289
Query: 136 RAE 138
E
Sbjct: 290 STE 292
>gi|449690494|ref|XP_002161127.2| PREDICTED: uncharacterized protein LOC100205379, partial [Hydra
magnipapillata]
Length = 1145
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 61/115 (53%), Gaps = 3/115 (2%)
Query: 25 EIVRKNLYGALSKVSIEA-AHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKY 83
E+VR ++ L +V + D+ ++ QV++ ++ +ES + + + ++ YK K
Sbjct: 15 ELVRSSVRRVLRQVLVSRCKQDELLVIQVESIG--KLCKKIESELLKLFVETNNKYKAKS 72
Query: 84 RRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
R L+FN D +N K+V+ G++ P +V MT +++A+ + W E K E
Sbjct: 73 RSLIFNLRDNQNKILYKRVVSGEITPYELVRMTPEQLATPALAQWREQESKHHLE 127
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 47.0 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A++ E + + ETY K R L+FN DP N R +VL G++ P+ + ++ E+
Sbjct: 177 ALAAEVELALHLAATPETYNAKARTLIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTEL 236
Query: 121 ASDKMQ 126
A +Q
Sbjct: 237 ARKDLQ 242
>gi|406607842|emb|CCH40780.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 240
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 43/203 (21%)
Query: 6 FSTNVPKASKVVKCNDCIREIVRKN---------LYGALSKVSIEAAHDKNVIDQVKACN 56
F N P+ +K ND ++ + +N LY L I++ H NV+
Sbjct: 56 FVANGPRNAK----NDGVKTDLYENRTRNGVIQALYNGLC---IDSEHPPNVL------- 101
Query: 57 PIQVAISMESAMY--EKWGRSSET-YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+++A +E+ ++ EK+ SS T Y + R L N N E R K+ GD+ P+ +
Sbjct: 102 -LKLAKEIEAEVFHAEKFDTSSNTKYAQRLRSLTSNLRQKNNPELRNKINNGDLLPKVFI 160
Query: 114 NMTAKEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI- 171
NM+ +EMA + + ++ +F+ + + V C +C K++S+
Sbjct: 161 NMSPREMAPESL------KKELEEIKKKNLFNAQGATQERAVTDRFTCGKCKEKKVSYYQ 214
Query: 172 --------PLRRHITCLNCYQYW 186
PL TC NC W
Sbjct: 215 LQTRSADEPLTTFCTCENCGNRW 237
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 4/131 (3%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E +++++ + YK + R + N D KN + R+ VL G++ + I MTA+E
Sbjct: 176 LAAQIEHQIFQEFKSTDMKYKARLRSRISNLKDQKNPDLRRNVLCGNISAQRIACMTAEE 235
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFIPLRR 175
MAS +++ E K + G + C C + R + P+
Sbjct: 236 MASAELKQIREALTKESIREHQLSKVGGTETDMFICSKCHGKNCTYTQVQTRSADEPMTT 295
Query: 176 HITCLNCYQYW 186
+ C C W
Sbjct: 296 FVLCNGCGNRW 306
>gi|154338127|ref|XP_001565288.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062337|emb|CAM42195.1| putative transcription elongation factor [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 329
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+E K ++ LLF+ D KN E R+KV+ G++ E +V M +E+A+ +++ E +
Sbjct: 208 TEQIKDTFQTLLFSIKDSKNGELRRKVVEGELLVERLVTMDDRELANPELRKQIEEKMEE 267
Query: 136 RA-ETN-GRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQ 184
R+ +TN I + + + ++ KC CG + S+ P+ ITC C
Sbjct: 268 RSKDTNLSEIRKAMRTSNSTLF---KCHVCGARDSSWEQRQTRSGDEPMTVIITCNKCST 324
Query: 185 YW 186
W
Sbjct: 325 QW 326
>gi|358387656|gb|EHK25250.1| hypothetical protein TRIVIDRAFT_81951 [Trichoderma virens Gv29-8]
Length = 304
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 14/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
I A+++E+A + + YK K R L N N + K+V+ GD+ P V MT
Sbjct: 169 IAKAVAVENAAFTLFNGEGAEYKKKIRSLFSNLKSKTNRDLGKRVMSGDITPSRFVTMTD 228
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
+++ S+ + + + N + ++ K+I + +C +C K++S+
Sbjct: 229 EDLKSEDQKKMEKEL----EKENMKKAQVPMAEKSISDSL-ECGKCKKKKVSYTQAQTRS 283
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 284 ADEPMTTFCECMNCGNRW 301
>gi|325183258|emb|CCA17716.1| transcription elongation factor putative [Albugo laibachii Nc14]
gi|325183904|emb|CCA18362.1| transcription elongation factor putative [Albugo laibachii Nc14]
Length = 309
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 24/153 (15%)
Query: 56 NPIQVAISMESAMYEKW-----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPE 110
N VA ++E AM + G + + Y K+R+L FN KN R+ +LL V E
Sbjct: 157 NAPDVATAIEIAMARMFSVGFPGENKKDYTAKFRQLSFNLK--KNARLREDLLLDVVSAE 214
Query: 111 TIVNMTAKEMASDKMQ--------LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSR 162
++NM+ +E+A+D+ + ++ +R A+ N + + G+ C R
Sbjct: 215 QLINMSPEELATDEKRHEIEKLRDDAFQRARLDWADANEDKINKQCGIEKNSKGLFTCGR 274
Query: 163 CGHKRMSFI---------PLRRHITCLNCYQYW 186
C + S P+ + C NC W
Sbjct: 275 CKSSKTSNTQKQTRSADEPMTVFVQCHNCGNRW 307
>gi|300120315|emb|CBK19869.2| unnamed protein product [Blastocystis hominis]
Length = 214
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 55 CNPIQVA-----ISMESAMYEKWGRS----SETYKFKYRRLLFNFNDPKNHEFRKKVLLG 105
CNP Q + +E A+ + S + Y+ +R + FN KN + L G
Sbjct: 66 CNPQQSKLLEHIVGLEDALSAAFNSSPNDITPNYRQHFRDIRFNLE--KNRQLLGDWLFG 123
Query: 106 DVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSP------KNIVYGICK 159
+++ + + +MTA+EM SD + RK R +F + N + G K
Sbjct: 124 ELESKKLASMTAEEMMSDDV-------RKERETIKEEMFEAYQTDWYKTHMMNKLSGGFK 176
Query: 160 CSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
C RCG + ++ P+ C+NC + W
Sbjct: 177 CRRCGSDKTQYMQKQTRSADEPMTVFFECMNCGKRW 212
>gi|149638336|ref|XP_001515301.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Ornithorhynchus
anatinus]
Length = 359
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
VR G L +++ D++ +DQ + ++A +E +Y + ++ + YK R
Sbjct: 181 VRHKAVGLLHGALTDSSSDQSKVDQGQ-----KLAREIEEHIYALYSKTIKKYKNCIRSK 235
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ N +PKN ++ + G + PE MT +MASD+++
Sbjct: 236 VSNLRNPKNVHLQQNLFSGSLTPEAFAEMTVMDMASDELK 275
>gi|400603045|gb|EJP70643.1| transcription elongation factor S-II [Beauveria bassiana ARSEF
2860]
Length = 309
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
++++E+A + + YK K R L N + N + V+ ++ PE V MT ++
Sbjct: 177 SVAVEAAAFAHFKGQGADYKKKIRSLFTNLKNKSNRALGQSVMASEIPPERFVAMTDDDL 236
Query: 121 ASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
SD +++L EN +K + ++ K+I + +C +C K++S+
Sbjct: 237 KSDDQRKKEIELEKENMKKAQVP---------MAEKSISDSL-ECGKCKKKQVSYTQAQT 286
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C+NC W
Sbjct: 287 RSADEPMTTFCECMNCGNRW 306
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 25/176 (14%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKAC-NPIQVAISMESAMYEKWGRSSETY 79
D +R R+ L AL D VID C +P ++A +E A+Y ++ + Y
Sbjct: 115 DAVRLKCRELLAAALR-------VDGKVID---GCASPEELAEELEEAIYAEFKNTDNRY 164
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAET 139
K + R + N D KN R ++G + P + MTA+EMASD+++ E +K
Sbjct: 165 KNRVRSRVANLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEIKQLREQFKKEAIND 224
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ L + + + KC +C + R + P+ + C C W
Sbjct: 225 -----AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 275
>gi|425781061|gb|EKV19043.1| Transcription elongation factor S-II [Penicillium digitatum PHI26]
gi|425783194|gb|EKV21053.1| Transcription elongation factor S-II [Penicillium digitatum Pd1]
Length = 306
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
AI++E + Y+ G + E Y+ K R L N + N + R +V+ G++ + V M+ E
Sbjct: 174 AIAVEISAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVVEGEITSDQFVRMSHDE 233
Query: 120 MAS-----DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
+ S ++ EN K R S + +C +CG +++++
Sbjct: 234 LRSVEQREADAKIQKENMDKAMVAQQERSISKSL----------QCGKCGQRKVTYTEAQ 283
Query: 172 ------PLRRHITCLNCYQYW 186
P+ TCLNC + W
Sbjct: 284 TRAADEPMTLFCTCLNCGKSW 304
>gi|406865033|gb|EKD18076.1| transcription elongation factor S-II [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 301
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
AI +E A ++ + + Y+ K R L N N E V+ G++ PE V M+ +E+
Sbjct: 169 AIEVEKAAFDAFKGDTPEYRSKLRSLFQNLKAISNRELAPAVMSGEIPPEKFVVMSHEEL 228
Query: 121 AS-----DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
S + +L +N +K + + S + KC +CG K++S+
Sbjct: 229 KSSERRKEDEKLQKDNMKKAQVPMAEKSISDAL----------KCGKCGQKKVSYSQAQT 278
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 279 RSADEPMTTFCECTVCGNRW 298
>gi|398015843|ref|XP_003861110.1| transcription elongation factor, putative [Leishmania donovani]
gi|322499335|emb|CBZ34408.1| transcription elongation factor, putative [Leishmania donovani]
Length = 333
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
E K ++ LLFN D KN E R+KV+ G++ E +V M E+A+ +++ E + R
Sbjct: 213 EQTKDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEER 272
Query: 137 A-ETN-GRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQY 185
+ +TN I + + + ++ KC CG + S+ P+ ITC C
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLF---KCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQ 329
Query: 186 W 186
W
Sbjct: 330 W 330
>gi|401422690|ref|XP_003875832.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492072|emb|CBZ27346.1| putative transcription elongation factor [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 337
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
E K ++ LLFN D KN E R+KV+ G++ E +V M E+A+ +++ E + R
Sbjct: 217 EQTKDTFQTLLFNIKDTKNGELRRKVMEGELLVERLVTMDDLELANPELRRHIEEKIEER 276
Query: 137 A-ETN-GRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQY 185
+ +TN I + + + ++ KC CG + S+ P+ ITC C
Sbjct: 277 SKDTNLSEIRKAMRTSNSTLF---KCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQ 333
Query: 186 W 186
W
Sbjct: 334 W 334
>gi|339898310|ref|XP_003392533.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
gi|321399505|emb|CBZ08701.1| putative transcription elongation factor [Leishmania infantum
JPCM5]
Length = 333
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
E K ++ LLFN D KN E R+KV+ G++ E +V M E+A+ +++ E + R
Sbjct: 213 EQTKDTFQTLLFNIKDSKNGELRRKVMEGELLVERLVTMDDLELANPELRKHIEEKIEER 272
Query: 137 A-ETN-GRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQY 185
+ +TN I + + + ++ KC CG + S+ P+ ITC C
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLF---KCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQ 329
Query: 186 W 186
W
Sbjct: 330 W 330
>gi|168035960|ref|XP_001770476.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678184|gb|EDQ64645.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 592
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 22/148 (14%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++VA ++E + G Y K R L FN + N+ +++L +++P+ ++NMT
Sbjct: 306 VEVAYALEKLANDSLGIDLHKYNLKMRSLDFNVKN--NNVLARRLLSKELRPDAVINMTP 363
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL---- 173
E+ + T R P+ + +CS CG + + I +
Sbjct: 364 AELKDGYL-------------TTEREDQAPPEPEAMQMADVRCSICGEREVGVIDIIHVS 410
Query: 174 ---RRHITCLNCYQYWASTNPEIRVLPI 198
R + CL C W S + L I
Sbjct: 411 YGDRYQLECLKCGNTWYSARDAVSSLVI 438
>gi|405121407|gb|AFR96176.1| positive transcription elongation factor [Cryptococcus neoformans
var. grubii H99]
Length = 333
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 14/114 (12%)
Query: 82 KYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNG 141
+ R L N D N R +++LG V E + +M+ EMAS+ +++ E + ++
Sbjct: 222 EMRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKE-----KIASDN 276
Query: 142 RIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ V KC RC ++ ++ P+ +TC NC W
Sbjct: 277 LFKAKAVGVTQAETDAFKCGRCHQRKCTYYQMQTRSADEPMTTFVTCTNCNNRW 330
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 52 VKAC-NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPE 110
++ C +P ++A +E A+Y ++ + YK + R + N D KN R + G + P
Sbjct: 170 IEGCASPEELAEELEEAIYAEFKNTDNRYKNRVRSRVANLRDAKNPNLRTNFIAGAITPA 229
Query: 111 TIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---- 166
+ MTA+EMASD+++ E +K + L + + + KC +C +
Sbjct: 230 RLAVMTAEEMASDEIKQLREQFKKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTY 284
Query: 167 -----RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 285 NQVQTRSADEPMTTFVLCNECGNRW 309
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL D N I+ +P ++A +E A+Y ++ + YK
Sbjct: 148 DAVRLKCRELLAAALR-------VDGNTIE--GCASPEELAEELEEAIYAEFKNTDNRYK 198
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R + G + P + MTA+EMASD+++ E +K
Sbjct: 199 NRVRSRVANLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEIKQLREQFKKEAIND- 257
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ L + + + KC +C + R + P+ + C C W
Sbjct: 258 ----AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 308
>gi|449015636|dbj|BAM79038.1| similar to transcription elongation factor TFIIS.h [Cyanidioschyzon
merolae strain 10D]
Length = 691
Score = 45.8 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 60 VAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
VA +ESA++E + + Y+ + R L+ N D +N E R+ V+ G + P T+ M ++
Sbjct: 232 VAYEIESALFELMDHKVHDDYRARLRNLVANLRDQRNDELREAVISGSISPSTLCQMNSE 291
Query: 119 EMASDKMQL 127
E+A ++++
Sbjct: 292 ELACKELRI 300
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 54 AC-NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
AC P ++A +E +Y ++ + YK + R + N DPKN R L G + +
Sbjct: 152 ACATPEELAEDLEECIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFLNGVINAARL 211
Query: 113 VNMTAKEMASDKMQLWYE 130
MT +EMASD+M+ E
Sbjct: 212 AKMTPEEMASDEMKKLRE 229
>gi|432866827|ref|XP_004070955.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1340
Score = 45.8 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 64 MESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+E+ M++ + + Y KYR ++FN DPKN +V+ G++ P +V M+ K+M +
Sbjct: 583 IETEMFDIFRNTDSKYMNKYRTIMFNLKDPKNKGLLYRVVHGEIGPFRLVRMSQKDMQA 641
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 15/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+Q + +E+A Y +G ++E Y+ K R L+ + N E ++VL GD+ PE MT
Sbjct: 173 LQRTMEVEAAAYAAYGDTNE-YRAKIRGLMTSLKRKDNPELGRRVLRGDIAPEKFAVMTD 231
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
+E+ASD + R E + + + + + +C +C K++S+
Sbjct: 232 EELASD-----AQRERDAALERENMLKAQVPMAQRSISDSLQCGKCKQKKVSYSQAQTRS 286
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 287 ADEPMTTFCECTVCGHRW 304
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E + + + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 219 KMASEIEDHILSELKGTDMKYRNRVRSRISNLKDPRNPNLRRNVLCGAISTSLIARMTAE 278
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL 173
EMASD+++ + E R+ + G + L C ++ R + P+
Sbjct: 279 EMASDELKELRNAMTLEAIREHQMAKTGGTTTDLFQCXKCKKKNCTYNQV-QTRSADEPM 337
Query: 174 RRHITCLNCYQYWASTNP 191
+ C C W P
Sbjct: 338 TTFVLCNECGNRWKVLGP 355
>gi|189514890|ref|XP_001919157.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Danio rerio]
Length = 394
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 5/118 (4%)
Query: 8 TNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESA 67
T+VP+ + N + K ++ L +S D ++++KA +A ++E
Sbjct: 197 TSVPQNTNQHTTNCDSTALRSKCVHLILQALSTNQQTDPGHMNKLKA-----LAENIELH 251
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
++ GR+ YKF R + N +P N R+ ++ G + P+ M+ +EMA +K+
Sbjct: 252 VHALHGRNQHKYKFHIRSKVANLKNPNNPHLRQGLISGQLTPDAFAQMSVEEMAGEKL 309
>gi|157869975|ref|XP_001683538.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
gi|68126604|emb|CAJ04034.1| putative transcription elongation factor [Leishmania major strain
Friedlin]
Length = 333
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 14/121 (11%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
E K ++ LLFN D KN E R+KV+ G++ E +V M E+A+ +++ E + R
Sbjct: 213 EQTKDTFQTLLFNIKDSKNGELRRKVVEGELLVERLVTMDDLELANPELRKHIEEKIEER 272
Query: 137 A-ETN-GRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQY 185
+ +TN I + + + ++ KC CG + S+ P+ ITC C
Sbjct: 273 SKDTNLSEIRKAMRTSNSTLF---KCRVCGARDSSWEQRQTRSGDEPMTVIITCNKCNTQ 329
Query: 186 W 186
W
Sbjct: 330 W 330
>gi|357520437|ref|XP_003630507.1| hypothetical protein MTR_8g098290 [Medicago truncatula]
gi|355524529|gb|AET04983.1| hypothetical protein MTR_8g098290 [Medicago truncatula]
Length = 579
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 24/149 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEF-RKKVLLGDVKPETIVNMT 116
+ +++E A+Y + + Y K R+L+FN KN+ F +++L G+++P I+NMT
Sbjct: 391 VPAVVALEKALYHTFSSDYQKYTQKLRQLVFNL---KNNAFLLRRLLNGELEPSKILNMT 447
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL--- 173
E+ K L E K + P+++ +C C +++ +
Sbjct: 448 PTEL---KEGLTAEEISKDEPD----------EPQHMQMTDARCKICDEQKVGVRDIIRA 494
Query: 174 ----RRHITCLNCYQYWASTNPEIRVLPI 198
R + C+ C W+++ + VL +
Sbjct: 495 GYADRYMLECIACGHSWSASRDAVSVLTL 523
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 45.8 bits (107), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 38 VSIEAAHDKNVIDQVKACNPIQVA---ISMESAMYEKWGRSSETYKFKYRRLLFNFNDPK 94
SIE +++V A P Q A +++ S +Y++ + Y+ + R + N DP+
Sbjct: 278 TSIEGQGEEDV-----ALGPPQTAGWPLTL-SHIYQELKSTDMKYRNRVRSRISNLKDPR 331
Query: 95 NHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
N R+ VL G + I MTA+EMASD+++
Sbjct: 332 NPGLRRNVLNGAISAGLIAKMTAEEMASDELR 363
>gi|325182938|emb|CCA17393.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325189886|emb|CCA24366.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 277
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 14/145 (9%)
Query: 54 ACNPIQVAISMESAMYEKWGRS---SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPE 110
A N Q+A+ +E+ ++E + + Y K R+LLFN D +N R +++ G++
Sbjct: 133 ADNSDQIAMEVENQLFELYKECFTLPKAYGQKARQLLFNLRDSRNDLLRDRLMSGELSAA 192
Query: 111 TIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF 170
+V M+A EMA+ ++ + K R R L S + +C CG R +
Sbjct: 193 ALVRMSANEMANPQLVKQRKQWIKKRTYEVMRNAPDLESLTE--SDMFECRSCGCSRTRY 250
Query: 171 IPLRRH---------ITCLNCYQYW 186
RR I C C W
Sbjct: 251 RQWRRKAIVDRTRIIIICTQCPYRW 275
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISMESAMYE---KWGRS 75
D +R+ ++ L+ A I +HD ++IDQ K N I ++E+ +++ + S
Sbjct: 191 DVLRDKAKQFLFKAF----IAGSHDNLLHIIDQNKLDNII---YNIENELFKIFIERKNS 243
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ Y + + + FN +D KN F +K+ + T+ M +++MASD+ + N R+
Sbjct: 244 QKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKK----NERQK 299
Query: 136 RAETNGRIFSGLVSPKNIVY-----GICKCSRCG---------HKRMSFIPLRRHITCLN 181
+ + KNI+ G +C +C R S P+ +TCL
Sbjct: 300 CLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTFVTCLK 359
Query: 182 CYQYW 186
C W
Sbjct: 360 CNNRW 364
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYK 80
D +R R+ L AL +E N ID + P ++A +E A++ ++ + Y+
Sbjct: 149 DAVRLKCRELLASALQ---VEG----NTIDGCAS--PEELAEELEEAIFGEFKNTDNKYR 199
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R ++G + P + MTA+EMASD+++ E +K
Sbjct: 200 NRVRSRVANLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLREQFKKEAIND- 258
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ L + + + KC +C + R + P+ + C C W
Sbjct: 259 ----AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 309
>gi|310789962|gb|EFQ25495.1| transcription elongation factor S-II [Glomerella graminicola
M1.001]
Length = 302
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+++E A Y + ++ Y+ K R L N N + V+ G + PE V MT +E+
Sbjct: 170 AVAVEYAAYIHFKGVTKEYREKLRSLFSNLKVKSNRQLGINVMEGKITPERFVVMTHEEL 229
Query: 121 ASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
SD+ + L EN +K + + S + KC +CG K++S+
Sbjct: 230 KSDEQRKKEDALQQENMKKAQVPMAEKSISDAL----------KCGKCGQKKVSYSQAQT 279
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 280 RSADEPMTTFCECTVCGNRW 299
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 25/143 (17%)
Query: 59 QVAISMESAMYEKWGRSSE-TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
Q A S+ Y + S++ Y+ + R + N DP+N R+KVL G + I MTA
Sbjct: 140 QCARSLAQRRYSRELSSTDMKYRNRVRSRISNLKDPRNPGLRRKVLSGAIAAGLIAKMTA 199
Query: 118 KEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK------ 166
+EMASD+++ + E R+ + G + L +CS+C K
Sbjct: 200 EEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQ 249
Query: 167 ---RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 250 VQTRSADEPMTTFVLCNECGNRW 272
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 6/133 (4%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E ++++ + Y+ + R + N DP+N R+ VL G + I MTA+
Sbjct: 216 KMASEIEDHIHQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGAISTGLIAKMTAE 275
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL 173
EMASD+++ + E R+ + G + L K C ++ R + P+
Sbjct: 276 EMASDELRELRNAMTQEAIREHQMAKTGGTTTDLFQCKKCKKKNCTYNQV-QTRSADEPM 334
Query: 174 RRHITCLNCYQYW 186
+ C C W
Sbjct: 335 TTFVLCNECGNRW 347
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 16/138 (11%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + Y+ + R + N DPKN R+ VL G + I M A+
Sbjct: 213 KMASEIEDHIYRELKSTDMKYRNRVRSRISNLKDPKNPGLRRNVLSGAISTGLIAKMMAE 272
Query: 119 EMASDKM-QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF------- 170
EMASD++ +L +++ E SG + + +CS+C K ++
Sbjct: 273 EMASDELKELRNAMTQEAIREHQMAKTSGTNT------DLLQCSKCKKKNCTYNQVQTLS 326
Query: 171 --IPLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 327 ADEPMTTFVLCNECGHRW 344
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 45.4 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 53 KACNPIQVAISMESAMYEKWGR--------SSETYKFKYRRLLFNFNDPKNHEFRKKVLL 104
K C+ +V +S+ + + W R + Y+ + R + N DP+N R+ VL
Sbjct: 64 KHCSDKEV-VSLAKVLIKNWKRLLAGELKGTDMKYRNRVRSRISNLKDPRNPGLRRNVLS 122
Query: 105 GDVKPETIVNMTAKEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICK 159
G + I MTA+EMASD+++ + E R+ + G + L +
Sbjct: 123 GAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKTGGTTTDLF----------Q 172
Query: 160 CSRCGHKRMSF---------IPLRRHITCLNCYQYW 186
CS+C K ++ P+ + C C W
Sbjct: 173 CSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGNRW 208
>gi|403349966|gb|EJY74429.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 45.4 bits (106), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA 137
TY K R LLFN +D KN E R K+L ++ + +V+ K++AS+ M ++ R
Sbjct: 419 TYSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWM-------KQKRE 471
Query: 138 ETNGRIFSGLVSPKNI--------VYGICKCSRCGHKRMSFI---------PLRRHITCL 180
E+ R S + ++ G+ +C CG ++ +I P+ + C
Sbjct: 472 ESLLRTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCY 530
Query: 181 NCYQYW 186
+C W
Sbjct: 531 DCENRW 536
>gi|378733301|gb|EHY59760.1| transcription elongation factor S-II [Exophiala dermatitidis
NIH/UT8656]
Length = 306
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 18/142 (12%)
Query: 58 IQVAISMESAMYE----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ +A +ESA K SS YK K R L N + N RK++L G+V V
Sbjct: 167 LDLAKEIESAALNLPEAKGSSSSPVYKDKIRSLYQNLKNKSNPGLRKRILSGEVTAVRFV 226
Query: 114 NMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-- 171
+MT +EM S Q E + + N + + + V +C +C K++S+
Sbjct: 227 SMTHEEMKSK--QQREEEIKIAKENMNNAM---VAQEEKSVSTSLECGKCHQKKVSYSQA 281
Query: 172 -------PLRRHITCLNCYQYW 186
P+ CLNC W
Sbjct: 282 QTRSADEPMTTFCECLNCGNRW 303
>gi|403368207|gb|EJY83934.1| Transcription elongation factor, putative [Oxytricha trifallax]
Length = 538
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 25/126 (19%)
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA 137
TY K R LLFN +D KN E R K+L ++ + +V+ K++AS+ M ++ R
Sbjct: 419 TYSDKARSLLFNLSDSKNFELRFKILNQELSAQQLVHTDVKKLASEWM-------KQKRE 471
Query: 138 ETNGRIFSGLVSPKNI--------VYGICKCSRCGHKRMSFI---------PLRRHITCL 180
E+ R S + ++ G+ +C CG ++ +I P+ + C
Sbjct: 472 ESLLRTLSMKRTDWDVQETLSQGEFQGMFQC-ECGSQKTGYIQLQIERADEPMTNFVYCY 530
Query: 181 NCYQYW 186
+C W
Sbjct: 531 DCENRW 536
>gi|449544753|gb|EMD35725.1| hypothetical protein CERSUDRAFT_115683 [Ceriporiopsis subvermispora
B]
Length = 306
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 26/141 (18%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A ++ES + ++ ++ YK K R L N D N R+ V+ GD+ + M+++EM
Sbjct: 174 AKAIESTVLSQFNGTNAEYKAKIRSLFVNLKDKNNPSLRESVVAGDLPVQRFCKMSSQEM 233
Query: 121 ASDKMQ-----LWYEN------SRKGRAETNGRIFSGLVSPKNIVYGICKCSRC----GH 165
AS++ + + EN + + +AET+ G CK +C
Sbjct: 234 ASEERKAADNRIMEENLFKSLGAEEVQAETDA-----------FQCGRCKQRKCRYRQAQ 282
Query: 166 KRMSFIPLRRHITCLNCYQYW 186
R + P+ +TC C W
Sbjct: 283 TRSADEPMTTFVTCTVCNNRW 303
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 15/138 (10%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+Q A+ +E+A + + + E Y+ K R L+ + N E ++VL G++ PE V MT
Sbjct: 159 LQRAMEVEAAAFAVYKDTPE-YRSKIRGLMTSLKRKDNPELGRRVLGGEITPEKFVVMTD 217
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------ 171
E+AS+ + +R E + + + + + +C++C K++S+
Sbjct: 218 DELASE-----AQRARDRELERENMLKAQVPMAQKSISDSLQCNKCKQKKVSYSQAQTRS 272
Query: 172 ---PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 273 ADEPMTTFCECTVCGHRW 290
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYENSR 133
Y+ + R + N DP+N R+ VL G + I MTA+EMASD+++ + E R
Sbjct: 214 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIR 273
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQ 184
+ + G + L +CS+C K R + P+ + C C
Sbjct: 274 EHQMAKTGGTTTDLF----------QCSKCKKKNCTYNQVQTRSADEPMTTFVLCNECGN 323
Query: 185 YW 186
W
Sbjct: 324 RW 325
>gi|367015614|ref|XP_003682306.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
gi|359749968|emb|CCE93095.1| hypothetical protein TDEL_0F02840 [Torulaspora delbrueckii]
Length = 295
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 3 HVIFSTNVPKASKVVKC-----NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNP 57
H FS+ P+ S+ N +R++V + +Y AL+K ++ H I
Sbjct: 109 HDKFSSTKPRNSRNDGVDTNIYNHKLRDMVIRAMYDALAK---DSEHPPKSI-------- 157
Query: 58 IQVAISMESAMYE--KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+Q A ++E M++ S + YK KYR + N N + + K+ GDV P +VN
Sbjct: 158 LQTAKAVEEEMHKLNNCDGSEKAYKDKYRIIYSNIISKNNPDLKHKITSGDVSPFYLVNC 217
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
KE+A + ++ E A+ N G +++ C +C K++S+
Sbjct: 218 DPKELAPEHLRRKLEEI----AKQNLFNAQGATVERSVTDRFT-CGKCKEKKVSYYQLQT 272
Query: 172 -----PLRRHITCLNCYQYW 186
PL TC C W
Sbjct: 273 RSADEPLTTFCTCEVCGNRW 292
>gi|380476055|emb|CCF44922.1| transcription elongation factor S-II [Colletotrichum higginsianum]
Length = 302
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+++E A + + ++ Y+ K R L N N + V+ G + PE V MT +E+
Sbjct: 170 AVAVEHAAFSHYKGVTKEYREKLRSLFSNLKVKSNRQLGVNVMEGKIAPERFVVMTHEEL 229
Query: 121 ASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
S++ + L EN +K + + S + KC +CG K++S+
Sbjct: 230 KSEEQRKKEDALQLENMKKAQVPMAEKSISDAL----------KCGKCGQKKVSYSQAQT 279
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 280 RSADEPMTTFCECTVCGNRW 299
>gi|409041587|gb|EKM51072.1| hypothetical protein PHACADRAFT_263043 [Phanerochaete carnosa
HHB-10118-sp]
Length = 303
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A ++E+A G + YK K R L N D N R+ V+ GD+ MT+ EM
Sbjct: 171 AKAIEAAALTDNGGVTAAYKAKIRTLFVNLKDKNNPGLRESVVAGDLPVTRFCKMTSAEM 230
Query: 121 ASDKMQLWYENSRKGRAETNGRIFSGL----VSPKNIVY--GICKCSRC----GHKRMSF 170
AS++ + R E N +F L V + + G CK +C R +
Sbjct: 231 ASEERKAADNRIR----EEN--LFKTLGAEEVQAETDAFQCGRCKQRKCRYRQAQTRSAD 284
Query: 171 IPLRRHITCLNCYQYW 186
P+ +TC C W
Sbjct: 285 EPMTTFVTCTVCNNRW 300
>gi|255939243|ref|XP_002560391.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585013|emb|CAP83061.1| Pc15g01750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 306
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 61 AISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
AI++E + Y+ G + E Y+ K R L N + N + R +V+ G++ + V M+ E
Sbjct: 174 AIAVEVSAYKYLGPETKEEYRTKIRSLFQNLKNKSNPKLRVRVIEGEITADQFVRMSHDE 233
Query: 120 MAS-----DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI--- 171
+ S ++ EN K R S + +C +CG +++++
Sbjct: 234 LRSVEQREADAKIQKENMDKAMVAQQERSISKSL----------QCGKCGQRKVTYTEAQ 283
Query: 172 ------PLRRHITCLNCYQYW 186
P+ TCL+C + W
Sbjct: 284 TRAADEPMTLFCTCLHCGKSW 304
>gi|170036777|ref|XP_001846238.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879681|gb|EDS43064.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 301
Score = 45.1 bits (105), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++ +E A++ ++ + YK + R + N D KN R + G + + + MT
Sbjct: 165 PEELGDELEEAIFSEFRNTDMKYKNRVRSRVANLKDLKNPSLRSNYINGAITAQRLAKMT 224
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY-GICKCSRCGHK----RMSFI 171
+EMASD+M+ + K A + ++ + + +++ G CK C + R S
Sbjct: 225 PEEMASDEMKNLRDRFVK-EAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQLQTRSSDE 283
Query: 172 PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 284 PMTTFVLCNECGNRW 298
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
Y+ + R + N DP+N R+ VL G + E I MTA+EMASD+++
Sbjct: 3 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELR 50
>gi|164657949|ref|XP_001730100.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
gi|159103995|gb|EDP42886.1| hypothetical protein MGL_2482 [Malassezia globosa CBS 7966]
Length = 899
Score = 44.7 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 57 PIQVAISMESAMYEKWGRSS--ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
P + A +E+ ++ +G+ YK K+R LLFN D +N +++ G++ IV+
Sbjct: 237 PHEYASQLEAELFRVYGQDPALRAYKEKFRSLLFNVKDHRNTSLHERITSGNLPAADIVH 296
Query: 115 MTAKEMASDKMQLWYENSRK 134
M+ + +A+D ++ E +++
Sbjct: 297 MSNEALANDTIREATEKAKR 316
>gi|403356500|gb|EJY77845.1| transcription elongation factor s-ii, putative [Oxytricha
trifallax]
Length = 618
Score = 44.7 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 58 IQVAISMESAMYEKWGRS-SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+ +A+++ES M+ + S S+ Y KYR+L + +N+E R K+L+G+++P + +++
Sbjct: 340 MNLALNIESHMWVLYDESISKEYSSKYRQLHTALRNDENYELRLKILMGEIEPSQVPDLS 399
Query: 117 AKEMASDKMQLWYENSRK 134
++AS Q E +K
Sbjct: 400 VNDLASKIQQEKKEMQQK 417
>gi|393220677|gb|EJD06163.1| transcription elongation factor [Fomitiporia mediterranea MF3/22]
Length = 296
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 20/160 (12%)
Query: 40 IEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGR-SSETYKFKYRRLLFNFNDPKNHE 97
IE +D V+D + I + A ++ES + E + + YK K R L N D N
Sbjct: 141 IELIYDSLVLDSAAPSDLILKRATAIESTVLEDHNNDTGKEYKGKIRSLFLNLKDKNNPG 200
Query: 98 FRKKVLLGDVKPETIVNMTAKEMASDKMQ-----LWYEN------SRKGRAETNGRIFSG 146
R ++ G+++ M+++EMAS++ + + EN + + +AET+ G
Sbjct: 201 LRANIVSGELEVAKFCRMSSQEMASEERKAADKAIQEENFYKSLGAEEQQAETDA-FQCG 259
Query: 147 LVSPKNIVYGICKCSRCGHKRMSFIPLRRHITCLNCYQYW 186
+ Y R R + P+ +TC+NC W
Sbjct: 260 KCKQRKTRY------RQAQTRSADEPMTTFVTCVNCNHRW 293
>gi|348685682|gb|EGZ25497.1| transcription elongation factor [Phytophthora sojae]
Length = 305
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 20/131 (15%)
Query: 73 GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW---- 128
G + Y KYR+L FN KN E R+ +L +V + +V MTA+E+A+++ +
Sbjct: 176 GEQKKEYMAKYRQLSFNLK--KNGELRQNLLDDNVSGDQLVKMTAEELATEEKRAQIEKL 233
Query: 129 ----YENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRR 175
++ +R AE N + G+ C RC + S P+
Sbjct: 234 RDDAFQEARLDWAEANHDKIQKQTGTEG-TKGLFTCGRCKSSKTSNTQKQTRSADEPMTV 292
Query: 176 HITCLNCYQYW 186
+ C NC W
Sbjct: 293 FVMCHNCGNRW 303
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 44.7 bits (104), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 7/143 (4%)
Query: 50 DQVKAC-NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVK 108
+Q + C +P ++A +E A+Y ++ + YK + R + N DPKN R + G +
Sbjct: 159 EQPEGCQSPEELADELEEAIYVEFKNTDMKYKNRVRSRVANLKDPKNPSLRSNFVSGAIT 218
Query: 109 PETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY-GICKCSRCGHK- 166
+ + MT +EMASD+M+ + K A + ++ + + +++ G CK C +
Sbjct: 219 AQRLAKMTPEEMASDEMKNLRDRFVK-EAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQ 277
Query: 167 ---RMSFIPLRRHITCLNCYQYW 186
R S P+ + C C W
Sbjct: 278 LQTRSSDEPMTTFVLCNECGHRW 300
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y ++ + YK + R + N DPKN R + G V + + MT +EMASD+M+
Sbjct: 194 IYSEFKNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKK 253
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHIT 178
E K + L + + + KC +C + R + P+ +
Sbjct: 254 LREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 308
Query: 179 CLNCYQYW 186
C C W
Sbjct: 309 CNECGNRW 316
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 30/188 (15%)
Query: 18 KCNDCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISMESAMYE---KW 72
K +D +R+ ++ L+ A I +HD ++ID+ K N I ++E+ +Y+ +
Sbjct: 187 KYHDALRDKAKQFLFKAF----ITGSHDNLLHLIDRNKLDNII---YNIENELYKIFIEK 239
Query: 73 GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENS 132
S + Y + + + FN +D KN F +K+ + T+ M +++MASD+ + N
Sbjct: 240 KNSQKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKK----NE 295
Query: 133 RKGRAETNGRIFSGLVSPKNIVY-----GICKCSRCG---------HKRMSFIPLRRHIT 178
R+ + + KNI+ G +C +C R S P+ +T
Sbjct: 296 RQKCLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTFVT 355
Query: 179 CLNCYQYW 186
CL C W
Sbjct: 356 CLKCNNRW 363
>gi|348680251|gb|EGZ20067.1| hypothetical protein PHYSODRAFT_495059 [Phytophthora sojae]
Length = 118
Score = 44.3 bits (103), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 20/123 (16%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM----QLWYENS 132
+ Y K R LLFN D +N + R +++ G++ ++V M ++MA+ ++ + W
Sbjct: 1 KAYAHKARTLLFNLKDSRNVDLRNRLVSGELPSHSLVRMNGRDMANPQLVRQRKEWIR-K 59
Query: 133 RKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPLRRH---------ITCLNCY 183
R +GR G S + +C CG R + RR + CL C
Sbjct: 60 RTHEVMRDGREAEGFES------DLFECRNCGSSRTRYRQWRRKAVVDRTRIIVICLRCP 113
Query: 184 QYW 186
W
Sbjct: 114 NRW 116
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y ++ + YK + R + N DPKN R + G V + + MT +EMASD+M+
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKK 258
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHIT 178
E K + L + + + KC +C + R + P+ +
Sbjct: 259 LREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 313
Query: 179 CLNCYQYW 186
C C W
Sbjct: 314 CNECGNRW 321
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQL 127
+Y ++ + YK + R + N DPKN R + G V + + MT +EMASD+M+
Sbjct: 199 IYMEFKNTDMKYKNRIRSRVANLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKK 258
Query: 128 WYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHIT 178
E K + L + + + KC +C + R + P+ +
Sbjct: 259 LREKFVKEAIND-----AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTRSADEPMTTFVM 313
Query: 179 CLNCYQYW 186
C C W
Sbjct: 314 CNECGNRW 321
>gi|348541331|ref|XP_003458140.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Oreochromis niloticus]
Length = 323
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 43/165 (26%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
DQ KA ++A +E ++E + YK R + N +PK+ + +L G + P
Sbjct: 166 DQDKA---AELARDIERHVHELHNHNQVKYKACVRSKVANLRNPKSGHLHQGLLSGSLSP 222
Query: 110 ETIVNMTAKEMASDKM-QLWYENSRKGRAETNGRIFSGLVSPKNIVYGI-------CKCS 161
E M+A++MAS ++ QL E S +G VS + + GI +C
Sbjct: 223 EAFARMSAEDMASAELRQLREEYSSQG------------VSERQLPQGIEGTRTEKIRCK 270
Query: 162 RCG---------HKRMSFIP--LRRH---------ITCLNCYQYW 186
RCG + + F+P +R+ +TC C Q W
Sbjct: 271 RCGGSDCRVTQVSRGVLFLPAWVRQGGPDEDAMTFVTCSGCGQQW 315
>gi|169867242|ref|XP_001840202.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
gi|116498754|gb|EAU81649.1| hypothetical protein CC1G_02665 [Coprinopsis cinerea okayama7#130]
Length = 298
Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 57 PIQV----AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
PI++ A +E A++ G +++ Y+ K R L N D N ++ ++ G++
Sbjct: 158 PIEMVLKRASEVEEAVFNLKGGANQEYRGKIRSLYVNLKDKNNPTLKEDIVSGEIPASRF 217
Query: 113 VNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPK-NIVYGICKCSRCGHK----- 166
MT++EMAS++ + K E N +F L + + + +CS+C +
Sbjct: 218 AVMTSEEMASEEQKAAL----KKIHEEN--LFKSLAAQEADAETDAFQCSKCKQRKCRYR 271
Query: 167 ----RMSFIPLRRHITCLNCYQYW 186
R + P+ +TC+ C W
Sbjct: 272 QAQTRSADEPMTTFVTCVVCGNRW 295
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 39 SIEAAHDKNVI---DQVKACNPIQVAISMESAMYEKWGRSS-ETYKFKYRRLLFNFNDPK 94
S+++ DK VI D + + + AI +E A + S+ Y+ K R L N D
Sbjct: 194 SVDSVRDKCVIMIYDALALDSTAERAIGIERAANKAMNFSTGNDYRAKMRSLFLNLKDKG 253
Query: 95 NHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
N R +++LG V E + +M+ EMAS+ +++ E
Sbjct: 254 NPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKE 289
>gi|238589160|ref|XP_002391938.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
gi|215457296|gb|EEB92868.1| hypothetical protein MPER_08559 [Moniliophthora perniciosa FA553]
Length = 125
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 16/128 (12%)
Query: 69 YEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
+ G +S Y+ + R L N D N R+ V+ G + + + M++ EMAS++ Q
Sbjct: 1 FNSHGGASTEYRARIRSLFVNLKDKNNPGLRESVVSGLIAADKLAKMSSAEMASEERQAA 60
Query: 129 YENSRKGRAETNGRIFSGLVSPKNIVY------GICKCSRCGHK----RMSFIPLRRHIT 178
+ ++ F+ L + + G CK +C ++ R + P+ +T
Sbjct: 61 DQKIKQEN------FFASLGAEEQQAETDAFQCGRCKQRKCRYRQAQTRSADEPMTTFVT 114
Query: 179 CLNCYQYW 186
C NC W
Sbjct: 115 CTNCGNRW 122
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 28/41 (68%)
Query: 88 FNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
FN DPKN+ KKVL G+V P+ ++ M+ +E+AS ++ W
Sbjct: 1 FNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAW 41
>gi|357481593|ref|XP_003611082.1| BAH and coiled-coil domain-containing protein [Medicago truncatula]
gi|355512417|gb|AES94040.1| BAH and coiled-coil domain-containing protein [Medicago truncatula]
Length = 596
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ +++E A +E + + Y K R+L FN + N +++L G++KP I+NMT
Sbjct: 389 VSAIVALEKASHEAFSTDFQKYNQKLRQLDFNLKN--NALLARRLLNGELKPSKILNMTP 446
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL---- 173
E+ K L E K + +++ +CSRC ++ +
Sbjct: 447 IEL---KEGLTAEEKTKKEPDEK----------QHMQMTDARCSRCTDSKVGLREIIHAG 493
Query: 174 ---RRHITCLNCYQYWASTNPEIRVLPI 198
R + C+ C W ++ E+ L I
Sbjct: 494 HDDRYQLECVACGNSWYASRNEVSALTI 521
>gi|312382732|gb|EFR28086.1| hypothetical protein AND_04400 [Anopheles darlingi]
Length = 420
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 11/125 (8%)
Query: 7 STNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACN-PIQVAISME 65
ST V S+ D +R R+ L AL +V E + C P ++ +E
Sbjct: 155 STPVSIPSQSSNTTDAVRLKCREMLANAL-RVDGEPP---------EGCQTPEELGEELE 204
Query: 66 SAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
A++ ++ + YK + R + N DPKN R + G + + + MT++EMASD+M
Sbjct: 205 EAIFVEFKNTDMRYKNRIRSRVANLKDPKNPSLRSNFVSGALTAQRLAKMTSEEMASDEM 264
Query: 126 QLWYE 130
+L +
Sbjct: 265 KLLRD 269
>gi|115385046|ref|XP_001209070.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196762|gb|EAU38462.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 305
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
E Y+ K R L N + N R +VL +V PE V M+ E+ S + + + +
Sbjct: 190 EQYRTKIRSLYQNLKNKSNPTLRVRVLSSEVTPEHFVKMSHDELRSAE-----QREQDAK 244
Query: 137 AETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ + + + + +C +CG +++++ P+ TC+NC + W
Sbjct: 245 IQKQNMDKAMVAQAERSISTSLQCGKCGQRKVTYTEAQTRSADEPMTLFCTCMNCGKSW 303
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 14/137 (10%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E +Y + + + Y R +FN D KN + ++ VL G++ + MT++
Sbjct: 213 RLAAEIEQEIYSLFNNTGDRYCACVRSRVFNLRDKKNPDLKRSVLSGEITAIRLATMTSE 272
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------- 171
EMAS+ ++ K E + ++ + +P ++ KC +C K ++
Sbjct: 273 EMASEALKAARRKFTKEAIEEH-QVAQEVGTPTDMF----KCGKCHKKNCTYTQAQTRSA 327
Query: 172 --PLRRHITCLNCYQYW 186
P+ + C C W
Sbjct: 328 DEPMTTFVYCRECGNRW 344
>gi|255713242|ref|XP_002552903.1| KLTH0D04136p [Lachancea thermotolerans]
gi|238934283|emb|CAR22465.1| KLTH0D04136p [Lachancea thermotolerans CBS 6340]
Length = 293
Score = 43.9 bits (102), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSE 77
N +R++V + Y AL+K E+ H I + AI++E + + + +
Sbjct: 129 NHKLRDMVIRAFYDALAK---ESEHPPQSI--------LTTAIAIEKELNKVNNCELNEK 177
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKGR 136
YK KYR + N N + + ++ GDV PE +VN KE+A + ++ E +R+
Sbjct: 178 AYKDKYRVVYANVISKNNPDLKHRITGGDVSPEYLVNCDPKELAPEHLKKKNEEIARQNL 237
Query: 137 AETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 238 FNAQGATLERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEVCGNRW 290
>gi|444318181|ref|XP_004179748.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
gi|387512789|emb|CCH60229.1| hypothetical protein TBLA_0C04310 [Tetrapisispora blattae CBS 6284]
Length = 308
Score = 43.9 bits (102), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 25/177 (14%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
N +R++V K LY AL K S E++ + + +E + + + Y
Sbjct: 144 NHKLRDMVVKALYDALVKDSTESSS---------LILKLATEVELEMKKFSDPDVNEKQY 194
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN-SRKGRAE 138
+ KYR + N N E + +++ GDV P +V KE+A + ++ E ++K
Sbjct: 195 RDKYRVVYSNLISKNNPELKFRIVGGDVSPARLVTCDPKELAPESLKKELEEIAKKNLYN 254
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 255 AQGATVQRSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 305
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 43.9 bits (102), Expect = 0.040, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 28 RKNLYGALSKVSIEAA-----HDKNVIDQVKACNPI--QVAISMESAMYEKW----GRSS 76
RKN+ AL K+ +E A K I + + + + ++E AMY+ G +
Sbjct: 279 RKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFAIEQAMYQNLCGGSGEPN 338
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ Y+ + R +LFN KN R +L+G + P+ M+ ++MAS++++
Sbjct: 339 DPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELR 386
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 43.5 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 28 RKNLYGALSKVSIEAA-----HDKNVIDQVKACNPI--QVAISMESAMYEKW----GRSS 76
RKN+ AL K+ +E A K I + + + + ++E AMY+ G +
Sbjct: 279 RKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFAIEQAMYQNLCGGSGEPN 338
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ Y+ + R +LFN KN R +L+G + P+ M+ ++MAS++++
Sbjct: 339 DPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELR 386
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 30/185 (16%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISMESAMYE---KWGRS 75
D +R+ ++ L+ A I +HD ++ID+ K N I ++E+ +Y+ + S
Sbjct: 189 DVLRDKAKQFLFKAF----IVGSHDNLLHLIDRNKLDNII---YNIENELYKIFIEKKNS 241
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKG 135
+ Y + + + FN +D KN F +K+ + T+ M +++MASD+ + N R+
Sbjct: 242 QKEYNMQLKSIKFNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKK----NERQK 297
Query: 136 RAETNGRIFSGLVSPKNIVY-----GICKCSRCG---------HKRMSFIPLRRHITCLN 181
+ + KNI+ G +C +C R S P+ +TCL
Sbjct: 298 CLQESLLACQSDWDVKNILLKKERKGEFQCFKCKGYDTVYQQLQTRSSDEPMTTFVTCLK 357
Query: 182 CYQYW 186
C W
Sbjct: 358 CNNRW 362
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 16/139 (11%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++ A +ES + ++ + YK K R N D N R V+ G++ E MT+
Sbjct: 185 LKRARGIESDVLSQFRTTGAEYKAKIRSFFVNLKDKNNPGLRAAVVSGELPVEKFAKMTS 244
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGL-VSPKNIVYGICKCSRCGHK---------R 167
+MAS++ + + R E N +F L + +CSRC + R
Sbjct: 245 ADMASEERRAQDQKIR----EEN--LFQSLGAEEQQAETDAFQCSRCKQRKCRYRQAQTR 298
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ +TC C W
Sbjct: 299 SADEPMTTFVTCTVCNNRW 317
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 43.5 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 60 VAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+ +S+E AMY G ++ YK + R ++FN N R ++L G + P T+ M
Sbjct: 318 LGLSVEHAMYVNLCGGSGEPNDAYKNQLRSIMFNVK--ANSSLRDRLLSGSLAPSTLATM 375
Query: 116 TAKEMASDKMQ 126
++++MAS++ Q
Sbjct: 376 SSQDMASEEQQ 386
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 75/176 (42%), Gaps = 20/176 (11%)
Query: 24 REIVRKNLYGALSKVSIEAAHDKNVIDQ--------VKACNPIQVAISMESAMY-EKWGR 74
R+ + G L K E D++V D+ + + + ++++E+A++ ++ +
Sbjct: 164 RDSKSDGVAGTL-KAEAETGGDESVRDKCVEMIYNALAGDSTAERSVAIEAAVFKQQKSQ 222
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
S Y+ K R L N D N R +++LG + E + +++ ++MAS+ ++ E
Sbjct: 223 SGNEYRAKMRSLFLNLKDKGNPGLRNEIVLGYLTAEKLASLSKEDMASESIRAMNEKI-- 280
Query: 135 GRAETNGRIFSG-LVSPKNIVYGICKCSRCGHKRMSFIPLRRHIT---CLNCYQYW 186
N +F V KC RC ++ ++ ++ NC W
Sbjct: 281 ----ANDNLFKAKAVGETQAETDAFKCGRCQQRKCTYYQMQTRSADEPMTNCGNRW 332
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 43.5 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 28 RKNLYGALSKVSIEAA-----HDKNVIDQVKACNPI--QVAISMESAMYEKW----GRSS 76
RKN+ AL K+ +E A K I + + + + ++E AMY+ G +
Sbjct: 280 RKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFAIEQAMYQNLCGGSGEPN 339
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ Y+ + R +LFN KN R +L+G + P+ M+ ++MAS++++
Sbjct: 340 DPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELR 387
>gi|118791506|ref|XP_319787.3| AGAP009035-PA [Anopheles gambiae str. PEST]
gi|116117634|gb|EAA14772.3| AGAP009035-PA [Anopheles gambiae str. PEST]
Length = 315
Score = 43.5 bits (101), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 57 PIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
P ++ +E A++ ++ + YK + R + N DPKN R + G + + + MT
Sbjct: 179 PEELGEELEEAIFVEFKNTDMRYKNRVRSRVANLKDPKNPSLRANFVSGAITAQRLAKMT 238
Query: 117 AKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------R 167
++EMASD+M+ + R + N + L + + + KC +C + R
Sbjct: 239 SEEMASDEMK--HLRDRFVKEAIND---AQLATVQGTKTDLLKCGKCKKRNCTYNQLQTR 293
Query: 168 MSFIPLRRHITCLNCYQYW 186
+ P+ + C C W
Sbjct: 294 SADEPMTTFVMCNECGHRW 312
>gi|212529070|ref|XP_002144692.1| PHD finger domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210074090|gb|EEA28177.1| PHD finger domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 883
Score = 43.5 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 60 VAISMESAMYE----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+ +S+E AMY G +E YK + R + FN N R ++L G++ P + M
Sbjct: 336 LGLSVEHAMYAVTCGGSGEPNEAYKSQLRAITFNLK--ANSSLRDRLLNGNLAPAALATM 393
Query: 116 TAKEMASDKMQ 126
T+++MAS++ Q
Sbjct: 394 TSQDMASEEQQ 404
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 14/127 (11%)
Query: 69 YEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW 128
Y ++ + YK + R + N DPKN R + G V + + MT +EMASD+M+
Sbjct: 22 YSEFNNTDMKYKNRIRSRVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKL 81
Query: 129 YENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITC 179
E K + L + + + KC++C + R + P+ + C
Sbjct: 82 REKFVKEAIND-----AQLATVQGTKTDLLKCAKCKKRNCTYNQLQTRSADEPMTTFVMC 136
Query: 180 LNCYQYW 186
C W
Sbjct: 137 NECGNRW 143
>gi|298711796|emb|CBJ32824.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 371
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 65/161 (40%), Gaps = 50/161 (31%)
Query: 59 QVAISMESAMYEK--WGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMT 116
+VA +E AM E + +Y K R+L+FN KN + R+ V G V+P+ +V MT
Sbjct: 225 RVAKGVECAMNENNPYLSKKASYLDKARQLVFNLK--KNDQLRQDVREGLVEPQRLVAMT 282
Query: 117 AKE-MASDK---------------MQLWYE------NSRKGRAETNGRIFSGLVSPKNIV 154
+ E MA DK M WY+ N + G ET+
Sbjct: 283 STELMAKDKREAMDKAVSERTEARMLDWYDKNEDKINKQCGIKETD-------------- 328
Query: 155 YGICKCSRCGH---------KRMSFIPLRRHITCLNCYQYW 186
G+ +C RC R + P+ +TC NC W
Sbjct: 329 -GMFECGRCKSTKTTYTQKQTRSADEPMTTFVTCSNCKNRW 368
>gi|219120375|ref|XP_002180927.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407643|gb|EEC47579.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 22/145 (15%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A+ +E+++ EK+ R + Y K R L FN KN ++V+LG V +V+ T++++
Sbjct: 180 AVEIEASLTEKF-RDRKGYTDKARSLAFNLK--KNQSLCQEVILGQVSASELVSFTSEQL 236
Query: 121 AS---------------DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICK----CS 161
AS D +L ++ + + + I L++ G CK S
Sbjct: 237 ASAETRQARATEAKKLIDSRRLDWDQANEDKINEMCGIKGDLLNASLFTCGRCKSVKTTS 296
Query: 162 RCGHKRMSFIPLRRHITCLNCYQYW 186
R + P+ + CLNC W
Sbjct: 297 TQKQTRSADEPMTVFVLCLNCGNRW 321
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 14/121 (11%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
S Y+ K R L N + N R+ V+ G++ + M+ +EMAS++ Q +
Sbjct: 193 SGNPYRTKIRSLYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEERQAESK---- 248
Query: 135 GRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQY 185
R E + KC RCG ++ + P+ +TC+NC
Sbjct: 249 -RIEEQNLFKAKGAEEAGAETDAFKCFRCGLRKTRYTQAQTRSADEPMTTFVTCVNCGNR 307
Query: 186 W 186
W
Sbjct: 308 W 308
>gi|366987517|ref|XP_003673525.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
gi|342299388|emb|CCC67142.1| hypothetical protein NCAS_0A05840 [Naumovozyma castellii CBS 4309]
Length = 307
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 81/202 (40%), Gaps = 42/202 (20%)
Query: 6 FSTNVPKASK-----VVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQV 60
F++ P+ SK V ND +R+ V K LY AL+K E+ H I +
Sbjct: 124 FTSTKPRNSKNDGVNTVVYNDKLRDSVVKALYDALAK---ESEHPPASI--------LHT 172
Query: 61 AISMESAMYEKWGRS--SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
S+E+ MY+ S YK KYR + N N + + K+ D+ P+ +VN K
Sbjct: 173 VKSIENEMYKLNNPSINERQYKEKYRIIYSNIISKNNPDLKNKITNNDITPDYLVNCDPK 232
Query: 119 EMASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI-- 171
E+A + ++ +N + T R + + C +C K++S+
Sbjct: 233 ELAPEHLKKKLEEIKKQNLFNAQGATIERSVTDRFT----------CGKCKEKKVSYYQL 282
Query: 172 -------PLRRHITCLNCYQYW 186
PL TC C W
Sbjct: 283 QTRSADEPLTTFCTCEACGNRW 304
>gi|365986008|ref|XP_003669836.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
gi|343768605|emb|CCD24593.1| hypothetical protein NDAI_0D02790 [Naumovozyma dairenensis CBS 421]
Length = 308
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V + LY AL+K S H N I + S+ES M++ + + YK
Sbjct: 147 LRDSVIRALYDALAKGS---EHPPNSI--------LHTVKSIESEMFKLNNCTENEKAYK 195
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
KYR + N N + + K+ D+ PE +V KE+A + ++ E +K
Sbjct: 196 EKYRIIYSNIISKNNADLKNKIANNDISPEYLVTCDPKELAPEHLKQKLEEIKK------ 249
Query: 141 GRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+F+ + + V C +C K++S+ PL TC C W
Sbjct: 250 QNLFNAQGATIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 305
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 43.1 bits (100), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
Y+ + R + N DP+N R+ VL G + I MTA+EMASD+++
Sbjct: 231 YRNRVRSRISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELR 278
>gi|403215573|emb|CCK70072.1| hypothetical protein KNAG_0D03260 [Kazachstania naganishii CBS
8797]
Length = 309
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGR--SSETYK 80
+R+ V + LY AL+K ++ H + + +Q A+ +E M + S + YK
Sbjct: 148 LRDSVVRALYDALAK---DSEHPPSSV--------LQTAVDIEKEMNALYDHVTSEKQYK 196
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
KYR + N N + + K+ GD+ P+ +V KE+A + + Q E +++
Sbjct: 197 EKYRIVYSNIISRNNPDLKFKITNGDLTPQFVVQCDPKELAPEHLRQKIEEITKQNLFNA 256
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + +C +C K++S+ PL TC C W
Sbjct: 257 QGATIERSVTDR------FQCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 77/187 (41%), Gaps = 32/187 (17%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISME-SAMYEKWGRSS 76
ND +R+ ++ L+ A I + D +ID+ K N I I E + + +S
Sbjct: 259 NDVLRDKAKQFLFKAF----ITGSDDNLLYLIDR-KKLNDIIYNIENELHKFFIEKKQSQ 313
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
+ Y + + + FN D KN F +K+ + P TI M ++EMASD+ +K R
Sbjct: 314 KEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDE-------KKKER 366
Query: 137 AETNGRIFSGLVSP---KNIVY-----GICKCSRCG---------HKRMSFIPLRRHITC 179
+ S KNI+ G +C +C R S P+ +TC
Sbjct: 367 NKCLQESLQACQSDWDVKNILLKKTRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTC 426
Query: 180 LNCYQYW 186
L C W
Sbjct: 427 LKCNNRW 433
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 43.1 bits (100), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 39 SIEAAHDKNVI---DQVKACNPIQVAISMESAMYEKWGRSS-ETYKFKYRRLLFNFNDPK 94
S+++ DK V+ D + + + AI +E A + S+ Y+ K R L N D
Sbjct: 181 SVDSVRDKCVVMIYDALALDSTAERAIGIERAANKSMNFSTGNDYRAKMRSLFLNLKDKG 240
Query: 95 NHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
N R +++LG + E + +M+ EMAS+ +++ E
Sbjct: 241 NPALRNEIVLGYISTEKVASMSKDEMASESVRMLKE 276
>gi|149024308|gb|EDL80805.1| transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 299
Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E+ +Y++ + Y+ + R + N DP+N R+ VL G + PE I MTA+
Sbjct: 214 KLASEIETHIYQELKSTDMKYRNRVRSRISNLKDPRNPGLRRNVLSGTISPELIAKMTAE 273
>gi|453088536|gb|EMF16576.1| hypothetical protein SEPMUDRAFT_145793 [Mycosphaerella populorum
SO2202]
Length = 855
Score = 43.1 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A +E A++ +G + + Y ++R LL NF KNH +++L G + + I M++ +M
Sbjct: 332 AARIEYALHMNYGGNQQGYSIQFRALLANFK--KNHVLVERLLNGSLTSDEISTMSSSDM 389
Query: 121 ASDKMQ 126
AS+ +Q
Sbjct: 390 ASEDLQ 395
>gi|350296969|gb|EGZ77946.1| transcription elongation factor [Neurospora tetrasperma FGSC 2509]
Length = 298
Score = 43.1 bits (100), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++ AI +E+A+++ ++ Y+ K R L + N ++V+ G++ E +V ++
Sbjct: 163 VKRAIEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSD 222
Query: 118 KEMASDKM-----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
KE+AS++ +L EN +K + ++ K+I + KC +CG +++S+
Sbjct: 223 KELASEEQRARDEELEKENMKKAQVP---------MAEKSISDAL-KCGKCGQRKVSYSQ 272
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 273 AQTRSADEPMTTFCECTVCGNRW 295
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 43.1 bits (100), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 7/143 (4%)
Query: 50 DQVKACNP-IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVK 108
+Q + C P ++ +E A++ + + YK + R + N DPKN R + G +
Sbjct: 148 EQPEGCQPPEELGEELEEAIFAEIKNTDFRYKNRVRSRVANLKDPKNPSLRANFVSGAIT 207
Query: 109 PETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY-GICKCSRCGHK- 166
E + MT +EMASD+M+ + K A + ++ + + +++ G CK C +
Sbjct: 208 AERLAKMTPEEMASDEMKNLRDRFVK-EAINDAQLATNQGTKTDLLKCGKCKKRNCTYNQ 266
Query: 167 ---RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 267 LQTRSADEPMTTFVLCNECGNRW 289
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 63/155 (40%), Gaps = 26/155 (16%)
Query: 54 ACNPI-----QVAISMESAMYEKW---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLG 105
+CNP ++ +E +Y + + + Y + + + FN DP N F ++ G
Sbjct: 142 SCNPDIAVLNKLVYDIEGELYTHYITRLNAQKEYNLQLKSIGFNLKDPNNKSFNDRIYKG 201
Query: 106 DVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY-----GICKC 160
++ +V M + +MASD+ +L R + + + + KNI G +C
Sbjct: 202 EINSLDLVTMKSIDMASDEKKL----QRNNILQESLQACQSDWAVKNIFLNNKSKGQFRC 257
Query: 161 SRCG---------HKRMSFIPLRRHITCLNCYQYW 186
+C R S P+ +TCL C W
Sbjct: 258 FKCKSSDTVYHQMQTRSSDEPMTTFVTCLKCQNRW 292
>gi|397624121|gb|EJK67280.1| hypothetical protein THAOC_11713 [Thalassiosira oceanica]
Length = 2246
Score = 42.7 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
S YK K R L FN DPKN +V++GD+ + +++ +A+++AS ++
Sbjct: 1997 SPEYKNKVRSLRFNLQDPKNPSLCARVIVGDMSIDELIDASAEDLASSALK 2047
>gi|452836512|gb|EME38456.1| hypothetical protein DOTSEDRAFT_75850 [Dothistroma septosporum
NZE10]
Length = 313
Score = 42.4 bits (98), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 70/178 (39%), Gaps = 26/178 (14%)
Query: 19 CNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKW-GRSSE 77
D +R+ K +Y ++ +S E+ V+D VA +E A +E + +++
Sbjct: 149 TGDAVRDGCLKLMYDGIAFMSEESPD--TVMD---------VARKVELAAFEHFKSETNQ 197
Query: 78 TYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-----QLWYENS 132
YK K R L N N RK V ++P V MT+ E+ S++ +L EN
Sbjct: 198 DYKAKMRSLFQNLKMKNNTLLRKDVFTMKIEPTRFVTMTSDELKSEEKRKKDEELEKENM 257
Query: 133 RKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMSFIPLRRHITCLNCYQYW 186
R+ + S G CK SR + R + PL C C W
Sbjct: 258 RQAMTAVEEKAIS-----TTFTCGKCKQSRVAYSQAQTRSADEPLTTFCECTMCGHRW 310
>gi|254585479|ref|XP_002498307.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
gi|238941201|emb|CAR29374.1| ZYRO0G07194p [Zygosaccharomyces rouxii]
Length = 298
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHD-KNVIDQVKACNPIQVAISMESAMYEKWGRSSET 78
N +R++V + LY AL+K E+ H +V+D K+ I E + +
Sbjct: 134 NHKLRDMVIRALYDALAK---ESEHPPSSVLDSAKS-------IEEEMNKLNNCDENEKA 183
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
YK KYR + N N + + K+ GDV + +V+ KE+A + ++ E A+
Sbjct: 184 YKDKYRIIYSNIISKNNPDLKHKITNGDVTSQYLVSCDPKELAPEHLKKKLEEI----AK 239
Query: 139 TNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
N G ++I C +C K++S+ PL TC C W
Sbjct: 240 QNLHNAQGATIQRSITDRFT-CGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 295
>gi|19074096|ref|NP_584702.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|19068738|emb|CAD25206.1| TRANSCRIPTION ELONGATION FACTOR SII [Encephalitozoon cuniculi
GB-M1]
gi|449329004|gb|AGE95279.1| transcription elongation factor sII [Encephalitozoon cuniculi]
Length = 257
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 16/144 (11%)
Query: 52 VKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPET 111
+ CN A+ E +GR+ R N D N ++V GD+ P
Sbjct: 118 ISDCNNASAALLARQITIEIFGRNPSDIAKLIRSKCLNLKDKNNPALCRRVYNGDISPSR 177
Query: 112 IVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF- 170
V+M+++EM S+ ++ N E + ++ + + I KCS+CG ++ S+
Sbjct: 178 YVDMSSEEMKSESLK----NEEVKMIEVS--LYECQIPTQKAETDIFKCSKCGERKCSYR 231
Query: 171 --------IPLRRHITCLNCYQYW 186
P+ +TC C W
Sbjct: 232 QLQTRSGDEPMTTFVTC-ECGNKW 254
>gi|85119699|ref|XP_965694.1| hypothetical protein NCU02563 [Neurospora crassa OR74A]
gi|28927506|gb|EAA36458.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38567143|emb|CAE76438.1| related to transcription elongation factor TFIIS [Neurospora
crassa]
gi|336464865|gb|EGO53105.1| hypothetical protein NEUTE1DRAFT_73389 [Neurospora tetrasperma FGSC
2508]
Length = 298
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++ A+ +E+A+++ ++ Y+ K R L + N ++V+ G++ E +V ++
Sbjct: 163 VKRAVEVENALFKACKGENQEYRSKGRTLFTSLKRKDNAALGRRVMSGELPVERLVVLSD 222
Query: 118 KEMASDKM-----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
KE+AS++ +L EN +K + ++ K+I + KC +CG +++S+
Sbjct: 223 KELASEEQRARDEELEKENMKKAQVP---------MAEKSISDAL-KCGKCGQRKVSYSQ 272
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 273 AQTRSADEPMTTFCECTVCGNRW 295
>gi|410079068|ref|XP_003957115.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
gi|372463700|emb|CCF57980.1| hypothetical protein KAFR_0D03320 [Kazachstania africana CBS 2517]
Length = 560
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 59 QVAISMESAMYEKWGRSSET-----YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
++A ++E+ +Y+ W E+ Y K R + N DPKN + V+ D+ E +V
Sbjct: 231 EMASNLENELYKAWFNPEESKLSNYYAEKVRSIFSNLKDPKNLNLQAHVVNKDIPFEKLV 290
Query: 114 NMTAKEMASDKMQLWYE 130
M+A E+A+ +Q + E
Sbjct: 291 RMSATELANPDLQQFKE 307
>gi|367020002|ref|XP_003659286.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
gi|347006553|gb|AEO54041.1| hypothetical protein MYCTH_2296116 [Myceliophthora thermophila ATCC
42464]
Length = 309
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
Y+ K R L+ + N E ++VL G++ P+ V MT +E+ASD + + RA
Sbjct: 195 YRNKIRGLMTSLKRKDNAELGRRVLDGEIPPDKFVVMTDEELASDAQR------ERDRAL 248
Query: 139 TNGRIFSGLV--SPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+ V + K+I + +C +CG K++S+ P+ C C W
Sbjct: 249 ERENMLKAQVPMAQKSISVDL-QCGKCGKKKVSYSQAQTRSADEPMTTFCECTVCGHRW 306
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 78/187 (41%), Gaps = 32/187 (17%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISME-SAMYEKWGRSS 76
ND +R+ ++ L+ A I + D +ID+ K N I I E ++ + +S
Sbjct: 231 NDVLRDKAKQFLFKAF----ITGSDDNLLYLIDR-KKLNDIIYNIENELHKIFIEKKQSQ 285
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGR 136
+ Y + + + FN D KN F +K+ + P+ I M ++EMASD+ +K R
Sbjct: 286 KEYNMQLKSIKFNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDE-------KKKER 338
Query: 137 AETNGRIFSGLVSP---KNIVY-----GICKCSRCG---------HKRMSFIPLRRHITC 179
+ S KNI+ G +C +C R S P+ +TC
Sbjct: 339 NKCLQESLQACQSDWDVKNILLKKNRKGEFQCFKCKGYETVYHQLQTRSSDEPMTTFVTC 398
Query: 180 LNCYQYW 186
L C W
Sbjct: 399 LKCNNRW 405
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 41.6 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ IE A D K ++ +E MY G
Sbjct: 285 VARRSAATALSKLVIEIAGAAVAAGTFTIPSDSTKETVGERLGAEIEDCMYRNLCGSSGE 344
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 345 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 394
>gi|412993729|emb|CCO14240.1| predicted protein [Bathycoccus prasinos]
Length = 157
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+ VA ++ESA++ S YK K R L NF +N +K VL G ++P ++ M
Sbjct: 13 LDVATAIESAVFH--NVSEVQYKSKIRFLCANFK--RNESVQKDVLSGRIQPYDVLQMHD 68
Query: 118 KEMASDKMQLWYENSRKGRAETNGR-IFSGLVSPKNIVYGICKCSRCGHKRMSFIPLRRH 176
+E +D+M+ E R + R +F+ + ++ C C ++ FI L
Sbjct: 69 EEFMTDEMKTKVEQMRVKMDKRKERAVFADGIESESYT-----CPECKGRKTKFIHL-SD 122
Query: 177 ITCLNCYQYWASTNPEIRVLPI 198
+ + W + + E +VL +
Sbjct: 123 ARDVRKAETWGNADAESKVLVV 144
>gi|388855201|emb|CCF51095.1| uncharacterized protein [Ustilago hordei]
Length = 1089
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSR 133
YK ++R LF+ D KN ++ GD+K + M+ +E+A+D ++ E +R
Sbjct: 387 YKDRFRTFLFSLKDAKNTTLHSRIATGDLKASELAKMSNEELANDAIRQATEKAR 441
>gi|115437168|ref|NP_001043228.1| Os01g0527400 [Oryza sativa Japonica Group]
gi|56202213|dbj|BAD73812.1| unknown protein [Oryza sativa Japonica Group]
gi|56202373|dbj|BAD73735.1| unknown protein [Oryza sativa Japonica Group]
gi|113532759|dbj|BAF05142.1| Os01g0527400 [Oryza sativa Japonica Group]
gi|215737002|dbj|BAG95931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 644
Score = 41.6 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 68/183 (37%), Gaps = 42/183 (22%)
Query: 33 GALSKVSIEAAHDKNVIDQVKACNP---IQVAISMESAMYEKWGRSSETYKFKYRRLLFN 89
G +K S + K D K+ +P + + S+E + YE G + Y K R+LLFN
Sbjct: 410 GGATKSSTNGSSAKE--DNEKSYSPDVIVSIMASLERSTYEALGSDFQKYNQKLRQLLFN 467
Query: 90 F-NDP------KNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGR 142
N P N E VLL E V +TA E S+ E SRK + T+ R
Sbjct: 468 IKNSPVLRNRLMNKELDPPVLLTMSPDELKVGLTAAERTSEP-----EESRKLQM-TDAR 521
Query: 143 IFSGLVSPKNIVYGICKCSRCGHKRMSFIPL-------RRHITCLNCYQYWASTNPEIRV 195
C RC K + + R + C C W S+ I
Sbjct: 522 -----------------CVRCAEKEVGVSDIIHAGHGDRYQLECNACGHSWFSSRDAITT 564
Query: 196 LPI 198
L +
Sbjct: 565 LTV 567
>gi|397629130|gb|EJK69212.1| hypothetical protein THAOC_09547 [Thalassiosira oceanica]
Length = 286
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 55/140 (39%), Gaps = 32/140 (22%)
Query: 72 WGRSS-ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM----- 125
W R +TY K R L+FN KN R++V+LG + E + M +E+A+ +M
Sbjct: 152 WSRGERKTYTEKVRSLVFNLK--KNGPLREQVILGQIVTEQLPKMPPEELATAEMNKERN 209
Query: 126 ----------QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRC---------GHK 166
QL +E +G+ I L+ + C RC
Sbjct: 210 AQAEKLMASRQLDWEKKNEGKINEICGIKGDLLK-----ASLFTCGRCKSTKTTSTQKQT 264
Query: 167 RMSFIPLRRHITCLNCYQYW 186
R + P+ + CLNC W
Sbjct: 265 RSADEPMTVFVLCLNCGNRW 284
>gi|336262956|ref|XP_003346260.1| DST1 protein [Sordaria macrospora k-hell]
gi|380093589|emb|CCC08553.1| putative DST1 protein [Sordaria macrospora k-hell]
Length = 298
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++ A+ +E+A+++ ++ Y+ K R L + N ++V+ G++ + +V ++
Sbjct: 163 VKRAVEVENALFKACKGENQEYRSKARTLFTSLKRKDNAALGRRVMSGELPVDRLVVLSD 222
Query: 118 KEMASDKM-----QLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI- 171
KE+AS++ +L EN +K + ++ K+I + KC +CG +++S+
Sbjct: 223 KELASEEQRARDEELEKENMKKAQVP---------MAEKSISDAL-KCGKCGQRKVSYSQ 272
Query: 172 --------PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 273 AQTRSADEPMTTFCECTVCGNRW 295
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 14/115 (12%)
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
+ R + N D KN R L+G + P + MTA+EMASD+++ E +K
Sbjct: 1 MQVRSRVANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAIND- 59
Query: 141 GRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQYW 186
+ L + + + KC +C + R + P+ + C C W
Sbjct: 60 ----AQLATVQGTKTDLLKCGKCKKRNCTYNQVQTRSADEPMTTFVLCNECGNRW 110
>gi|327268236|ref|XP_003218904.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Anolis carolinensis]
Length = 350
Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q A +E ++ + YK R + N +PKN+ + + +G + P+T M+A
Sbjct: 199 QTAEEIEQHIFALHAGNDRKYKNSIRSKVSNLKNPKNYHLKHSLHIGVLSPQTFAGMSAV 258
Query: 119 EMASDKMQLW---YENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRC 163
EMA D+++ Y S + RI SG ++ K KC RC
Sbjct: 259 EMAHDELKQLRASYTKSAVQEHQLPQRI-SGTLTNK------IKCRRC 299
>gi|444517013|gb|ELV11334.1| Death-inducer obliterator 1 [Tupaia chinensis]
Length = 1966
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + +VA+ +E M+ + + YK KYR
Sbjct: 680 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGRVALHIEKEMFSLFHVTDNRYKSKYRS 737
Query: 86 LLFNFNDPKNH 96
++FN DPKN
Sbjct: 738 IMFNLKDPKNQ 748
>gi|402086070|gb|EJT80968.1| transcription elongation factor S-II [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 295
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 57/140 (40%), Gaps = 26/140 (18%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
AI +ESA ++++ + Y+ + R L N N E K+V GD+ V MT+ E+
Sbjct: 165 AIEVESAAFKEYNGETADYRTQMRSLFSNLK--ANRELAKRVFAGDIATAKFVKMTSDEL 222
Query: 121 ASD-----KMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---- 171
SD + L EN +K + R S + +C +C K++S+
Sbjct: 223 KSDHLKKKEEALEKENMKKAQVPMVERSISDAL----------ECGKCKQKKVSYTQAQT 272
Query: 172 -----PLRRHITCLNCYQYW 186
P+ C C W
Sbjct: 273 RSADEPMTTFCECTVCGNRW 292
>gi|355784325|gb|EHH65176.1| Death-inducer obliterator 1 [Macaca fascicularis]
Length = 2156
Score = 41.2 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRR 85
+R+N+ +L ++ + +D + D + N + ++A+ +E M+ + + YK KYR
Sbjct: 649 IRQNIRRSLKEILWKRVNDSD--DLIMTENEVGKIALHIEKEMFNLFQVTDNRYKSKYRS 706
Query: 86 LLFNFNDPKNHEFRKKVLLGDVKPET 111
++FN DPKN + L + +T
Sbjct: 707 IMFNLKDPKNQVMESRTKLHNESKKT 732
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 15/104 (14%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK-----MQLWYE 130
S YK K R L+FN D N R+ V+ G++ + +M +MAS++ +L E
Sbjct: 144 SNGYKNKMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEERKAQDRKLAEE 203
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPLR 174
N K R P+ +C RCG ++ ++ ++
Sbjct: 204 NLFKARG----------AGPQQAETDAFRCGRCGQRKCTYYQMQ 237
>gi|328351440|emb|CCA37839.1| Transcription elongation factor A protein 2 .l [Komagataella
pastoris CBS 7435]
Length = 329
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN----- 131
+TY+ K R L+ N + N R+ +L ++ P +V M+A+E+A D ++ E
Sbjct: 213 DTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKN 272
Query: 132 --SRKGRAETNG---RIFSGLVSPKNIVY-------------GICKCSRCGHK 166
+G E N R G + + Y CKC CG++
Sbjct: 273 LFDAQGATENNSVTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNR 325
>gi|254569920|ref|XP_002492070.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
gi|238031867|emb|CAY69790.1| General transcription elongation factor TFIIS [Komagataella
pastoris GS115]
Length = 285
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYEN----- 131
+TY+ K R L+ N + N R+ +L ++ P +V M+A+E+A D ++ E
Sbjct: 169 DTYRNKLRSLIMNLKNKNNPTLRRSILDHEIIPSKLVTMSAQELAPDSLKKEMEEIYKKN 228
Query: 132 --SRKGRAETNG---RIFSGLVSPKNIVY-------------GICKCSRCGHK 166
+G E N R G + + Y CKC CG++
Sbjct: 229 LFDAQGATENNSVTDRFECGKCKQRKVSYFQKQTRSADEPLTTFCKCENCGNR 281
>gi|432094051|gb|ELK25843.1| Death-inducer obliterator 1 [Myotis davidii]
Length = 1848
Score = 41.2 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRL 86
+R+N+ +L ++ + A D + + ++ +VA +E M+ + + YK KYR +
Sbjct: 309 IRQNIRRSLKEILWKRASDSDDLMMTES-EVGKVAFHIEKEMFNLFHVTDNRYKSKYRSI 367
Query: 87 LFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+FN DPKN + L +T V A
Sbjct: 368 MFNLKDPKNQVMESRARLHQESKKTAVRQEA 398
>gi|428184331|gb|EKX53186.1| hypothetical protein GUITHDRAFT_132948 [Guillardia theta CCMP2712]
Length = 1089
Score = 41.2 bits (95), Expect = 0.26, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 74 RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM 125
R+ Y K R+LLFN DP+N RK+VL ++ P ++V ++A+ +
Sbjct: 1032 RARAWYNQKVRQLLFNLRDPRNDALRKQVLSSELPPSSLVVADPAKLANSDL 1083
>gi|444509110|gb|ELV09184.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Tupaia chinensis]
Length = 351
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY ALS SI DQ KA +A +E +Y ++ + YK R + N
Sbjct: 181 LYTALSNSSI---------DQPKASLWQNLAREIEEHVYTLHSKNLKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P M EMAS +++
Sbjct: 232 KNPKNSHLQQNLLSGTMSPREFAKMNVMEMASQELK 267
>gi|325053992|pdb|3PO3|S Chain S, Arrested Rna Polymerase Ii Reactivation Intermediate
Length = 178
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 17 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 65
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 66 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 125
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 126 QGATIERSVTDRFT------CGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175
>gi|449299188|gb|EMC95202.1| hypothetical protein BAUCODRAFT_530419 [Baudoinia compniacensis
UAMH 10762]
Length = 311
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 15/137 (10%)
Query: 60 VAISMESAMYE-KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
A S+E+A + +S YK K R L N N R+ V G ++P+ V MT
Sbjct: 177 AARSVEAAAFSVHNNETSSAYKMKMRSLFQNLKMKGNATLRRDVFNGKIEPKRFVTMT-- 234
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI------- 171
SD+++ + ++ E S + + C++C R+++
Sbjct: 235 ---SDELKNAEKRAQDAALEKENMKASMTAQEEKAISTTMTCNKCKQSRVAYTQAQTRSA 291
Query: 172 --PLRRHITCLNCYQYW 186
P+ C NC W
Sbjct: 292 DEPMTTFCECTNCGNRW 308
>gi|61679514|pdb|1Y1V|S Chain S, Refined Rna Polymerase Ii-tfiis Complex
gi|61679527|pdb|1Y1Y|S Chain S, Rna Polymerase Ii-Tfiis-DnaRNA COMPLEX
Length = 179
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 18 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 66
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 67 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 126
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 127 QGATIERSVTDRFT------CGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 176
>gi|346321715|gb|EGX91314.1| transcription elongation factor s-ii [Cordyceps militaris CM01]
Length = 303
Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 24/122 (19%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASD-----KMQLWYENSR 133
YK K R L N + N V+ ++ PE V MT ++ SD +++L EN +
Sbjct: 189 YKKKIRSLFTNLKNKSNRALGVSVMGSEIPPERFVAMTDDDLKSDDQRKKEIELEKENMK 248
Query: 134 KGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQ 184
K + ++ K+I + +C +C K++S+ P+ C+NC
Sbjct: 249 KAQVP---------MAEKSISDSL-ECGKCKQKKVSYTQAQTRSADEPMTTFCECMNCGN 298
Query: 185 YW 186
W
Sbjct: 299 RW 300
>gi|328767604|gb|EGF77653.1| hypothetical protein BATDEDRAFT_91451 [Batrachochytrium
dendrobatidis JAM81]
Length = 296
Score = 40.4 bits (93), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 58/139 (41%), Gaps = 20/139 (14%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A S+E ++ + YK + R L N N R +VL G + + MTA+
Sbjct: 164 KIASSIEKHIFAACECTDAKYKSRIRTLTSNLK--LNASLRSQVLGGKISTDRFAMMTAE 221
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKN--IVYGICKCSRCGHKRMSFI----- 171
EM S++ L E ++K + VS N + +C RC ++ ++
Sbjct: 222 EMMSEERVLEVEKAKKNS-------MADAVSAANQEAETDMFRCGRCKQRKATYYQMQTR 274
Query: 172 ----PLRRHITCLNCYQYW 186
P+ +TC +C W
Sbjct: 275 SADEPMTTFVTCCHCGNKW 293
>gi|71004188|ref|XP_756760.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
gi|46095649|gb|EAK80882.1| hypothetical protein UM00613.1 [Ustilago maydis 521]
Length = 1137
Score = 40.4 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSR 133
YK ++R LF+ D KN ++ G ++P + MT +E+A+D ++ E +R
Sbjct: 436 YKDRFRTFLFSLKDAKNTTLHSRISSGQLQPSELGKMTNEELANDSIRQATEKAR 490
>gi|239781978|pdb|3GTM|S Chain S, Co-Complex Of Backtracked Rna Polymerase Ii With Tfiis
Length = 173
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 12 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 60
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 61 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 120
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 121 QGATIERSVTDRFT------CGKCKEKKVSYYQLQTRSADHPLTTFCTCEACGNRW 170
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ E A D K ++ +E MY G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 328
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ E A D K ++ +E MY G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 328
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 40.4 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ E A D K ++ +E MY G
Sbjct: 270 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSTGE 329
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 330 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 379
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 40.4 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ E A D K ++ +E MY G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSAGE 328
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 40.4 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 26 IVRKNLYGALSKVSIEAAHDKNVI-------DQVKACNPIQVAISMESAMYEKW----GR 74
+ R++ ALSK+ E A D K ++ +E MY G
Sbjct: 269 VARRSAATALSKLVTEIAGTAVAAGTFTIPSDSTKEAVGERLGTEIEDCMYRNLCGSAGE 328
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G P+ I M+ + MAS +++
Sbjct: 329 PNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTMSTQNMASQELR 378
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 40.0 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 64 MESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+E+ MY+ G ++ YK + R +LFN KN R +L+G P++I M+ +
Sbjct: 344 IENCMYKNLCGSSGEPNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQN 401
Query: 120 MASDKMQ 126
MAS +++
Sbjct: 402 MASQELR 408
>gi|71032861|ref|XP_766072.1| transcription elongation factor SII [Theileria parva strain Muguga]
gi|68353029|gb|EAN33789.1| transcription elongation factor SII, putative [Theileria parva]
Length = 324
Score = 40.0 bits (92), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 21/141 (14%)
Query: 63 SMESAMYEKW---GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
SME ++Y+ + + + Y + + + FN D KN K+ + + + MT+ +
Sbjct: 186 SMELSLYDHYVVENDNRKAYNQQLKCIAFNLKDVKNTILNYKLYNKMITVDELTRMTSLQ 245
Query: 120 MASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVY-----GICKCSRCGHK-------- 166
MASD+ +L R E + + KNI G KC++C K
Sbjct: 246 MASDEKKL----QRNEILEQSLEACQSDWAIKNIFLAKKSAGQFKCNKCNSKVTTYYQLQ 301
Query: 167 -RMSFIPLRRHITCLNCYQYW 186
R S P+ +TCLNC W
Sbjct: 302 TRSSDEPMTTFVTCLNCKNRW 322
>gi|22328569|ref|NP_192893.2| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
gi|19347810|gb|AAL86355.1| unknown protein [Arabidopsis thaliana]
gi|22136724|gb|AAM91681.1| unknown protein [Arabidopsis thaliana]
gi|332657624|gb|AEE83024.1| bromo-adjacent homology (BAH) domain-containing protein
[Arabidopsis thaliana]
Length = 587
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 24/144 (16%)
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLL-GDVKPETIVNMTAKEMA 121
++E+A + + Y K R L+FN KN + LL G+++P TI+NM+ E+
Sbjct: 410 ALENASHASLASDFQKYNQKMRTLVFNL---KNTALLARRLLNGELEPATILNMSPTEL- 465
Query: 122 SDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL-------R 174
K L + + K + R+ V +CSRC + + R
Sbjct: 466 --KEGLTADETTKKEPDDADRMQMTSV----------RCSRCSQLTVGLRDIIQAGHGDR 513
Query: 175 RHITCLNCYQYWASTNPEIRVLPI 198
+ C++C W ++ E+ L I
Sbjct: 514 YQLECVDCGYSWYASRDEVSTLTI 537
>gi|330796078|ref|XP_003286096.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
gi|325083915|gb|EGC37355.1| hypothetical protein DICPUDRAFT_77009 [Dictyostelium purpureum]
Length = 310
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 6/135 (4%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P VA +E+ +Y + + YK K R F FN N R +L + E +M
Sbjct: 175 SPEDVATEVEAELYSIYKGLTADYKNKVRS--FKFNLQSNDGLRDSLLNRILTIEKFCSM 232
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGH----KRMSFI 171
MASD+++ K + E + + + G CK RC + R +
Sbjct: 233 DVMSMASDELKEERRKLDKFQTEASMIGTNNEATTDQFQCGKCKQRRCTYFQMQTRSADE 292
Query: 172 PLRRHITCLNCYQYW 186
P+ + C+NC W
Sbjct: 293 PMTTFVRCINCGNRW 307
>gi|47200172|emb|CAF87330.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 40.0 bits (92), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 35/149 (23%)
Query: 68 MYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA---------- 117
+Y++ + YK + R + N DPKN RK VL G + I +M+A
Sbjct: 111 IYQEIKATDMKYKNRVRSRISNLKDPKNPGLRKNVLAGTIALSRIASMSAEVGAARPDRS 170
Query: 118 -----------KEMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCS 161
KEMASD+++ L E R+ + G + L+ G CK
Sbjct: 171 GAPPFHVCVSTKEMASDELKQLRNTLTQEAIREHQMAKTGGTTTDLLQ-----CGKCKKK 225
Query: 162 RCGH----KRMSFIPLRRHITCLNCYQYW 186
C + R + P+ + C C W
Sbjct: 226 NCTYNQVQTRSADEPMTTFVLCNECGNRW 254
>gi|407919544|gb|EKG12774.1| Zinc finger PHD-type protein [Macrophomina phaseolina MS6]
Length = 885
Score = 39.7 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
+ A+ +E+AM + Y ++R ++ N P+NH ++L G V P+ + M+A+
Sbjct: 320 RFALDIEAAMLKYHPAGPAAYAQQFRNIVANL--PRNHSLLIQLLNGAVTPDQLATMSAE 377
Query: 119 EMASDKMQ 126
+MAS++ +
Sbjct: 378 DMASEEQK 385
>gi|224002418|ref|XP_002290881.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974303|gb|EED92633.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2469
Score = 39.7 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 60 VAISMESAMYEKWGRS-----SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVN 114
+A +E A+++K+ RS S Y+ K R L FN DPKN +VL G + ++
Sbjct: 2066 LASDLEQAIFDKF-RSPHDSISNEYRDKVRSLRFNLQDPKNPMLCARVLSGQLPISQLIV 2124
Query: 115 MTAKEMASDKMQ 126
M++ ++AS +++
Sbjct: 2125 MSSADLASKELK 2136
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 39.7 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 28 RKNLYGALSKVSIEAA--------HDKNVIDQVKACNPIQVAISMESAMYEKW----GRS 75
RKN+ A+ K+ +E A + + + C + MY+ G
Sbjct: 316 RKNVANAIIKLFVEQAGVAQEQGKFSNSGRENERQCRRESGGSHLSKPMYQNLCGGSGEP 375
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
++ YK + R +LFN KN R +L+G + P+ M+ ++MAS++++
Sbjct: 376 NDAYKQQMRTILFNVR--KNPSLRDSLLVGRISPDAFSKMSTQDMASEELR 424
>gi|444520653|gb|ELV13035.1| PHD finger protein 3 [Tupaia chinensis]
Length = 1690
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 11 PKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE 70
P A+ D IR+ VR +L L K D N+ +V +VA +E ++
Sbjct: 630 PAAAASKPSTDQIRQSVRHSLKDILMK----RLTDSNL--KVPEEKAAKVATKIEKELFS 683
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNH 96
+ + YK KYR L+FN DPKN+
Sbjct: 684 FFRDTDAKYKNKYRSLMFNLKDPKNN 709
>gi|393240426|gb|EJD47952.1| hypothetical protein AURDEDRAFT_86321, partial [Auricularia
delicata TFB-10046 SS5]
Length = 865
Score = 39.7 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 8/91 (8%)
Query: 56 NPIQVAISMESAMYEKWGR--------SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDV 107
N + +E M+E + +S YK ++R L FN + R++++ GD+
Sbjct: 227 NAVAFVADLEHTMFEHYAEPDKNGNPHASGKYKERFRMLTFNLSKEDRVILRRRIVSGDL 286
Query: 108 KPETIVNMTAKEMASDKMQLWYENSRKGRAE 138
+ + NM++ ++AS++ + E K E
Sbjct: 287 PADELANMSSTDLASEETKQAIEQVLKESLE 317
>gi|363742332|ref|XP_003642622.1| PREDICTED: transcription elongation factor A protein 3-like [Gallus
gallus]
Length = 398
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
++A +E ++++ + Y+ + R + N DPKN R+ VL G + P I MTA+
Sbjct: 269 KMASEIEDHIFQELKSTDMKYRNRVRSRISNLKDPKNPNLRRNVLCGAIAPALIARMTAE 328
Query: 119 EMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNI 153
+++ + + R+ RA + G P+++
Sbjct: 329 VHSAE--DVAFPEGRELRACGAEPLAEGDAEPRSL 361
>gi|7267856|emb|CAB78199.1| putative protein [Arabidopsis thaliana]
gi|7321053|emb|CAB82161.1| putative protein [Arabidopsis thaliana]
Length = 652
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 22/143 (15%)
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
++E+A + + Y K R L+FN + +++L G+++P TI+NM+ E+
Sbjct: 475 ALENASHASLASDFQKYNQKMRTLVFNLKN--TALLARRLLNGELEPATILNMSPTEL-- 530
Query: 123 DKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL-------RR 175
K L + + K + R+ V +CSRC + + R
Sbjct: 531 -KEGLTADETTKKEPDDADRMQMTSV----------RCSRCSQLTVGLRDIIQAGHGDRY 579
Query: 176 HITCLNCYQYWASTNPEIRVLPI 198
+ C++C W ++ E+ L I
Sbjct: 580 QLECVDCGYSWYASRDEVSTLTI 602
>gi|358369364|dbj|GAA85979.1| PHD finger domain protein [Aspergillus kawachii IFO 4308]
Length = 927
Score = 39.7 bits (91), Expect = 0.74, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 14/68 (20%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
Q+++S+ESAM + R ++FN KN R ++L+G + P+ + M+ +
Sbjct: 384 QLSLSLESAMSQ------------LRTIMFNVK--KNPSLRDRLLVGSLSPDALSKMSTQ 429
Query: 119 EMASDKMQ 126
+MAS+++Q
Sbjct: 430 DMASEELQ 437
>gi|171424|gb|AAA34580.1| DST1 [Saccharomyces cerevisiae]
gi|172773|gb|AAA88734.1| DNA strand transferase alpha [Saccharomyces cerevisiae]
Length = 309
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 148 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 196
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 197 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 256
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 257 QGATIERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|207345303|gb|EDZ72168.1| YGL043Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323333438|gb|EGA74832.1| Dst1p [Saccharomyces cerevisiae AWRI796]
Length = 242
Score = 39.3 bits (90), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 81 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 129
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 130 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 189
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 190 QGATIERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 239
>gi|171473978|gb|AAW27827.2| SJCHGC09118 protein [Schistosoma japonicum]
Length = 309
Score = 39.3 bits (90), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ-LWYENSRKGRA 137
YK R + N +PKN R +L G + PE M+ +EMA++++Q L E S +G +
Sbjct: 178 YKACIRSKVTNLRNPKNGHLRCGLLGGSLGPEVFARMSLEEMANEELQRLREEYSSQGVS 237
Query: 138 E 138
E
Sbjct: 238 E 238
>gi|392559485|gb|EIW52669.1| transcription elongation factor [Trametes versicolor FP-101664 SS1]
Length = 306
Score = 39.3 bits (90), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 26/141 (18%)
Query: 61 AISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEM 120
A +E ++ ++ YK K R L N D N R+ V+ GD+ M++++M
Sbjct: 174 AKDIEKTVFNDNSGANAAYKAKIRSLFVNLKDKNNPGLRESVVSGDLAIAKFCRMSSQDM 233
Query: 121 ASDK-----MQLWYEN------SRKGRAETNGRIFSGLVSPKNIVYGICKCSRC----GH 165
AS++ ++ EN + + +AET+ G CK +C
Sbjct: 234 ASEERKAADAKIAQENLFKTLGAEEVQAETDA-----------FQCGRCKQRKCRYRQAQ 282
Query: 166 KRMSFIPLRRHITCLNCYQYW 186
R + P+ +TC C W
Sbjct: 283 TRSADEPMTTFVTCTVCNNRW 303
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 39.3 bits (90), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
S + Y + + + FN +D KN F +KV + + + M +++MASD+ + N RK
Sbjct: 280 SQKEYNMQLKSIKFNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKK----NERK 335
Query: 135 GRAETNGRIFSGLVSPKNIVY-----GICKCSRCG---------HKRMSFIPLRRHITCL 180
+ + KNI+ G +C +C R S P+ +TCL
Sbjct: 336 KCLQESLLACQSDWDVKNILLKKSRKGEFQCFKCKGYDTIYHQLQTRSSDEPMTTFVTCL 395
Query: 181 NCYQYW 186
C W
Sbjct: 396 KCNNRW 401
>gi|303388862|ref|XP_003072664.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
gi|303301806|gb|ADM11304.1| transcription elongation factor S-II [Encephalitozoon intestinalis
ATCC 50506]
Length = 256
Score = 39.3 bits (90), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 16/126 (12%)
Query: 70 EKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWY 129
E +GRS R N D N ++V GD+ P V+MT++EM S+ ++
Sbjct: 135 EIFGRSPSDIAKLVRSKCLNLKDKNNPVLCRRVYDGDISPSRYVDMTSEEMKSENLK--- 191
Query: 130 ENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCL 180
N E + ++ + + + KCS+CG ++ S+ P+ +TC
Sbjct: 192 -NEEVKMIEDS--LYECQIPTQKAETDMFKCSKCGERKCSYRQLQTRSGDEPMTTFVTC- 247
Query: 181 NCYQYW 186
C W
Sbjct: 248 ECGNKW 253
>gi|168053895|ref|XP_001779369.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669167|gb|EDQ55759.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 937
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 58/156 (37%), Gaps = 30/156 (19%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
++V ++E Y+ G Y K R+L FN KN +++L +++P ++NM+
Sbjct: 645 VEVVSALERLSYDSLGNDLHKYNLKMRQLDFNVK--KNKVLARRLLNKELEPAEVINMSP 702
Query: 118 KEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFIPL---- 173
E+ + E+ + P+ + +CS C + + I +
Sbjct: 703 AELKDGYIAAEREDQER-------------TEPETMQMADVRCSICTEREVRVIDIIHVG 749
Query: 174 -----------RRHITCLNCYQYWASTNPEIRVLPI 198
+ CL C W S+ I L I
Sbjct: 750 FGDRYQICFGKNVQLECLKCGTTWYSSRDAISSLVI 785
>gi|6321395|ref|NP_011472.1| Dst1p [Saccharomyces cerevisiae S288c]
gi|1729915|sp|P07273.4|TFS2_YEAST RecName: Full=Transcription elongation factor S-II; AltName:
Full=DNA strand transfer protein alpha; Short=STP-alpha;
AltName: Full=DNA strand transferase 1; AltName:
Full=Pyrimidine pathway regulatory protein 2
gi|34810565|pdb|1PQV|S Chain S, Rna Polymerase Ii-Tfiis Complex
gi|218517|dbj|BAA02046.1| transcriptional elongation factor S-II [Saccharomyces cerevisiae]
gi|1322528|emb|CAA96744.1| DST1 [Saccharomyces cerevisiae]
gi|151943248|gb|EDN61561.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|190407007|gb|EDV10274.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
RM11-1a]
gi|256271330|gb|EEU06396.1| Dst1p [Saccharomyces cerevisiae JAY291]
gi|285812157|tpg|DAA08057.1| TPA: Dst1p [Saccharomyces cerevisiae S288c]
gi|323304905|gb|EGA58662.1| Dst1p [Saccharomyces cerevisiae FostersB]
gi|323309085|gb|EGA62313.1| Dst1p [Saccharomyces cerevisiae FostersO]
gi|323337623|gb|EGA78868.1| Dst1p [Saccharomyces cerevisiae Vin13]
gi|323348527|gb|EGA82771.1| Dst1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323354949|gb|EGA86780.1| Dst1p [Saccharomyces cerevisiae VL3]
gi|349578179|dbj|GAA23345.1| K7_Dst1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365765583|gb|EHN07090.1| Dst1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299216|gb|EIW10310.1| Dst1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 309
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K E+ H I + A ++ES M + + YK
Sbjct: 148 LRDQVLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYK 196
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 197 ARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNA 256
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 257 QGATIERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|378731658|gb|EHY58117.1| hypothetical protein HMPREF1120_06135 [Exophiala dermatitidis
NIH/UT8656]
Length = 919
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 60 VAISMESAMYEKW----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+ + +E A+Y+ G +E YK + R + FN KNH ++L G++ P + M
Sbjct: 290 LGLGLEHALYQVQVGGNGDPNEAYKAQLRSITFNVK--KNHALGLRLLKGELTPRMLAAM 347
Query: 116 TAKEMASDKMQ 126
K+MAS++ +
Sbjct: 348 DPKDMASEEQK 358
>gi|351704572|gb|EHB07491.1| Death-inducer obliterator 1 [Heterocephalus glaber]
Length = 741
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 10 VPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPI-QVAISMESAM 68
+PK S V+ +R+I+R +L L K E+ D ++ N + + AI +E M
Sbjct: 225 LPKPS--VQPESQLRQIIRHSLKEILWKRVCESG------DLIRTENEVGKTAIRLEEEM 276
Query: 69 YEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGD-VKPETIVNMTAKEMASDKMQL 127
+ + + Y+ KYR ++ DP + + + +G + P+T+ + K +S +L
Sbjct: 277 FNLFRVTDHRYRSKYRSIMLRLKDPASQDLPDTIHIGGRIAPKTVWDYVGKLKSSVSKEL 336
>gi|302757675|ref|XP_002962261.1| hypothetical protein SELMODRAFT_438037 [Selaginella moellendorffii]
gi|300170920|gb|EFJ37521.1| hypothetical protein SELMODRAFT_438037 [Selaginella moellendorffii]
Length = 725
Score = 38.9 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 28/178 (15%)
Query: 29 KNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLF 88
K+ Y + EAA +K+ Q + S+E+A YE + K R L +
Sbjct: 309 KSFYMTTQQEGSEAAGEKD--PQFTPEQAVSAVSSLETAAYE--ALDERKFNLKMRSLEY 364
Query: 89 NF-NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGL 147
N N P +++L +++ T+VNMT E+ D M +++++
Sbjct: 365 NLRNGPV---LARRLLAKELQALTVVNMTPSEL-KDGMTAAEKSAQEPE----------- 409
Query: 148 VSPKNIVYGICKCSRCGHKRMSFIPL-------RRHITCLNCYQYWASTNPEIRVLPI 198
P+ + +C+ CG ++ + R + CL C W S I L I
Sbjct: 410 -QPQTVQMADVRCALCGEPQVGVKDIINAPHGDRYQLECLKCGHSWYSARDSISSLTI 466
>gi|401625778|gb|EJS43771.1| dst1p [Saccharomyces arboricola H-6]
Length = 309
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 69/176 (39%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYK 80
+R+ V K LY L+K ++ H I + A ++E M + S YK
Sbjct: 148 LRDQVLKALYDVLAK---DSEHPPQSI--------LHTAKAIEDEMNKINNCDSSEALYK 196
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAET 139
+YR + N N + + K+ GD+ PE + AK++A + Q E S++
Sbjct: 197 ARYRIIYSNIISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEISKQNLYNA 256
Query: 140 NGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 257 QGATIERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|395840531|ref|XP_003793109.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Otolemur garnettii]
Length = 352
Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ ++ ++ + YK R + N
Sbjct: 182 LYTALTGSST---------DQPKAPLWQNFAREIEEHIFTRYSKNIKKYKTCIRSKVANL 232
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G + P MT EMA+++++
Sbjct: 233 KNPRNSHLQQNLLSGALSPREFAEMTVMEMANEELK 268
>gi|398398099|ref|XP_003852507.1| hypothetical protein MYCGRDRAFT_59339, partial [Zymoseptoria
tritici IPO323]
gi|339472388|gb|EGP87483.1| hypothetical protein MYCGRDRAFT_59339 [Zymoseptoria tritici IPO323]
Length = 314
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 67/176 (38%), Gaps = 26/176 (14%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSET-Y 79
D +R+ K +Y ++ +S E+ D V + VA +E A +E + R + Y
Sbjct: 154 DAVRDGCLKLMYDGIAFMSKESP------DAV-----LTVARKVEVAAFEHFKRETNAEY 202
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS-----DKMQLWYENSRK 134
K K R L N N RK V ++ PE V MT++E+ S + + EN K
Sbjct: 203 KTKMRSLFQNLKMRSNTLLRKNVFSEEIPPEKFVAMTSEELKSAEKRAEDALIEKENMNK 262
Query: 135 GRAETNGRIFSGLVSPKNIVYGICKCSRC----GHKRMSFIPLRRHITCLNCYQYW 186
+ S + G CK S R + PL C C W
Sbjct: 263 SMTPKEAKAIS-----TTMTCGKCKGSAVSYSQAQTRSADEPLTTFCECTLCGNRW 313
>gi|402469030|gb|EJW04098.1| transcription elongation factor S-II [Edhazardia aedis USNM 41457]
Length = 305
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLL----FNFNDPKNHEFRKKVLLG 105
+ +K C+ Q AI + + E T K K R L+ N ++ N E + V G
Sbjct: 164 NHIKECDFEQAAIVAKKIVDE----LVRTDKIKDRELVASKKLNLSNKANPELCQNVYNG 219
Query: 106 DVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPK-NIVYGICKCSRCG 164
+ PE + MT +EM S+ ++ R+ + + + + S L PK + KCSRC
Sbjct: 220 TISPERYIAMTIEEMKSEDLK-----KREEKMKQDQLMDSQL--PKLQADTTMFKCSRCK 272
Query: 165 HKRMSFI---------PLRRHITCLNCYQYW 186
+ ++ P+ +ITC C W
Sbjct: 273 QSKTTYYQLQTRSADEPMTNYITCCVCGHKW 303
>gi|449266698|gb|EMC77719.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Columba livia]
Length = 360
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 3 HVIFSTNVPKASKVVKCNDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAI 62
H+ + P +K D +R ++R L K +A DK D+ ++++
Sbjct: 159 HIDNEDSEPLVNKASLQQDPVR-VLRCKCTDLLYKALAGSAKDKEETDKW-----LELSK 212
Query: 63 SMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
+E ++ ++++ YK R + N +PK+ R + G + P+ MT EMAS
Sbjct: 213 EIEEHIFSLHAKNNKKYKNCIRSKISNLKNPKSCHLRHNLFSGTLSPKAFAEMTVMEMAS 272
Query: 123 DKMQ 126
D+++
Sbjct: 273 DELK 276
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Query: 54 AC-NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETI 112
AC +P ++A +E +Y ++ + YK + R + N DPKN R G + +
Sbjct: 148 ACGSPEELAEELEECIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFFNGVISASRL 207
Query: 113 VNMTAKEMASDKMQLWYE 130
MT +EMASD+M+ E
Sbjct: 208 AKMTPEEMASDEMKKLRE 225
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDK--NVIDQVKACNPIQVAISME-SAMYEKWGRSS 76
ND +R+ ++ L+ A I + D +ID+ K N I I E + + +S
Sbjct: 226 NDVLRDKAKQFLFKAF----ITGSDDNLLYLIDR-KKLNDIIYNIENELHKFFIEKKQSQ 280
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDK 124
+ Y + + + FN D KN F +K+ + P TI M ++EMASD+
Sbjct: 281 KEYNMQLKSIKFNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDE 328
>gi|399215957|emb|CCF72645.1| unnamed protein product [Babesia microti strain RI]
Length = 300
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 14/120 (11%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRA- 137
Y + + + FN D N + + +G++ P+ + M ++MAS+K++ E K
Sbjct: 181 YAQQIKSIRFNLQDNNNTQLNYNLHVGEITPQQLATMAPQDMASEKLKRKREMVLKESML 240
Query: 138 --ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+++ + + L+S K G C +C + + P+ +TCL C W
Sbjct: 241 ACQSDWAVKNILLSSK--TPGQFTCFKCKQSKTVYTQVQTRSSDEPMTTFVTCLVCQNRW 298
>gi|125526247|gb|EAY74361.1| hypothetical protein OsI_02248 [Oryza sativa Indica Group]
Length = 625
Score = 37.7 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 17/112 (15%)
Query: 33 GALSKVSIEAAHDKNVIDQVKACNP---IQVAISMESAMYEKWGRSSETYKFKYRRLLFN 89
G +K S + K D K+ +P + + S+E + YE G + Y K R+LLFN
Sbjct: 410 GGATKSSTNGSSAKE--DNEKSYSPDVIVSIMASLERSTYEALGSDFQKYNQKLRQLLFN 467
Query: 90 F-NDP------KNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
N P N E VLL E V +TA E S+ E SRK
Sbjct: 468 IKNSPVLRNRLMNKELDPPVLLTMSPDELKVGLTAAERTSEP-----EESRK 514
>gi|332223857|ref|XP_003261084.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Nomascus
leucogenys]
Length = 381
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + + + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKDIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 262 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 297
>gi|355559483|gb|EHH16211.1| TFIIS central domain-containing protein 1 [Macaca mulatta]
gi|355757190|gb|EHH60715.1| TFIIS central domain-containing protein 1 [Macaca fascicularis]
Length = 380
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 210 LYAALTSSSA---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 260
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 261 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 296
>gi|355723573|gb|AES07935.1| transcription elongation factor A N-terminal and central domain
containing [Mustela putorius furo]
Length = 146
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E ++ ++ YK R + N +P N ++ +L G P MTA E
Sbjct: 34 LAREIEGHLFTLHSKNLRKYKICVRSKVANLKNPHNSHLQQNLLSGTTSPREFAEMTALE 93
Query: 120 MASDKMQ 126
MAS++++
Sbjct: 94 MASEELK 100
>gi|332223859|ref|XP_003261085.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Nomascus
leucogenys]
gi|441673101|ref|XP_004092410.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Nomascus leucogenys]
Length = 351
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + + + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKDIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 232 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 267
>gi|402909518|ref|XP_003917464.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein [Papio anubis]
Length = 350
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 180 LYAALTSSSA---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 230
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 231 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 266
>gi|109129943|ref|XP_001096593.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 1 [Macaca
mulatta]
gi|297303341|ref|XP_002806188.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like isoform 2 [Macaca
mulatta]
Length = 350
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 180 LYAALTSSSA---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 230
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 231 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 266
>gi|50310967|ref|XP_455506.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644642|emb|CAG98214.1| KLLA0F09361p [Kluyveromyces lactis]
Length = 292
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 29/176 (16%)
Query: 23 IREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSET--YK 80
IR++ + LY AL+K E+ H I + +S+E+ M + S+ Y+
Sbjct: 131 IRDMAIRALYDALAK---ESEHPPVAI--------LDTVMSIETEMANLFNPESDEKGYR 179
Query: 81 FKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETN 140
KYR + N N + + ++ G+V + +V K++A + ++ E K
Sbjct: 180 DKYRIIYSNIISKNNPDLKHRITNGEVSAKHLVTADPKDLAPEHLKKKIEEIEK------ 233
Query: 141 GRIFSGL-VSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
+F+ + + V +C +C +++S+ PL TC NC W
Sbjct: 234 QNLFNAQGATVERSVTDRFQCGKCKQRKVSYYQLQTRSADEPLTTFCTCENCGNRW 289
>gi|75057265|sp|Q9GMV6.1|TEANC_MACFA RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
gi|9929973|dbj|BAB12143.1| hypothetical protein [Macaca fascicularis]
Length = 350
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 180 LYAALTSSSA---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 230
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G + P MT EMA+ +++
Sbjct: 231 KNPKNSHLQQNLLSGTMSPREFAEMTVMEMANKELK 266
>gi|452979563|gb|EME79325.1| hypothetical protein MYCFIDRAFT_57652 [Pseudocercospora fijiensis
CIRAD86]
Length = 312
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 15/137 (10%)
Query: 60 VAISMESAMYEKWG-RSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAK 118
VA +E A +E + ++S YK K R L N N RK V ++ P+ V MT+
Sbjct: 178 VARKVEVAAFEHFKHQTSPEYKAKMRSLYQNLKMKGNARLRKDVYSMEIMPKRFVAMTSD 237
Query: 119 EMASDKMQ-----LWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK----RMS 169
E+ S++M+ + EN K + S V G CK ++ + R +
Sbjct: 238 ELKSEEMRKEDAVIERENMNKAMTAQEEKAIS-----TTFVCGKCKQAKVAYSQAQTRSA 292
Query: 170 FIPLRRHITCLNCYQYW 186
PL C C W
Sbjct: 293 DEPLTTFCECTVCGNRW 309
>gi|91084035|ref|XP_966732.1| PREDICTED: similar to transcription elongation factor S-II
[Tribolium castaneum]
gi|270008004|gb|EFA04452.1| hypothetical protein TcasGA2_TC014756 [Tribolium castaneum]
Length = 294
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 56 NPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNM 115
+P +A +E A+++++ + YK + R + N D KN R +G + + M
Sbjct: 157 SPEDLAEELEEAIFQEFKNTDMRYKNRVRSRIANLKDVKNPNLRTNFRIGAIPASRLAVM 216
Query: 116 TAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHK--------- 166
TA+EMA+D+++ E R + N + L + + + KC +C +
Sbjct: 217 TAEEMANDEIKQLRE--RFTKEAIND---AQLATVQGTKTDLLKCGKCKKRNCTYNQVQT 271
Query: 167 RMSFIPLRRHITCLNCYQYW 186
R + P+ + C C W
Sbjct: 272 RSADEPMTTFVLCNECGNRW 291
>gi|255072159|ref|XP_002499754.1| predicted protein [Micromonas sp. RCC299]
gi|226515016|gb|ACO61012.1| predicted protein [Micromonas sp. RCC299]
Length = 181
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 47 NVIDQVKACNPI-QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLG 105
N+ + ++ +P+ +A ++E A++ + G ++ ++ N +N R++VL G
Sbjct: 19 NLGEALEDPSPLFDLARAVEQALFVRKGSDAKDPSYRSAARFLAANIRRNGPLRRRVLDG 78
Query: 106 DVKPETIVNMTAKEMASDKMQ 126
++ PE + ++ E+A+D+M+
Sbjct: 79 ELSPEALCELSPDELATDEMK 99
>gi|431909796|gb|ELK12942.1| Transcription elongation factor A N-terminal and central
domain-containing protein [Pteropus alecto]
Length = 352
Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 40/77 (51%)
Query: 50 DQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKP 109
DQ +A +A +E ++ + ++ + YK R + N +PKN ++ +L G + P
Sbjct: 192 DQPQADLWHSLAREIEGHIFTLYSKNLKKYKACIRSKVANLKNPKNSHLQQNLLSGTMSP 251
Query: 110 ETIVNMTAKEMASDKMQ 126
MT EMAS++++
Sbjct: 252 REFAEMTVMEMASNELK 268
>gi|297709429|ref|XP_002831433.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pongo abelii]
gi|297709431|ref|XP_002831434.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pongo abelii]
Length = 351
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G P MT EMA+ +++
Sbjct: 232 KNPKNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|300234|gb|AAC60551.1| RNA polymerase II elongation factor homolog [Saccharomyces
cerevisiae]
Length = 505
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 188 EFAHNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 247
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 248 NMNASELANPDLQEFKEKRDK 268
>gi|207343439|gb|EDZ70897.1| YKL005Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 540
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 223 EFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 282
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 283 NMNASELANPDLQEFKEKRDK 303
>gi|170652914|sp|A6ZZW1.1|BYE1_YEAS7 RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|151941541|gb|EDN59904.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae YJM789]
Length = 594
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 277 EFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 336
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 337 NMNASELANPDLQEFKEKRDK 357
>gi|398364821|ref|NP_012921.3| Bye1p [Saccharomyces cerevisiae S288c]
gi|549655|sp|P36106.1|BYE1_YEAST RecName: Full=Transcription factor BYE1; AltName: Full=Bypass of
ESS1 protein 1
gi|485977|emb|CAA81837.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285813255|tpg|DAA09152.1| TPA: Bye1p [Saccharomyces cerevisiae S288c]
gi|392298137|gb|EIW09235.1| Bye1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 594
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 277 EFAHNLEEELYKACLNVEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 336
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 337 NMNASELANPDLQEFKEKRDK 357
>gi|296421697|ref|XP_002840401.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636616|emb|CAZ84592.1| unnamed protein product [Tuber melanosporum]
Length = 110
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIF 144
++LF K++ R +V+ G++ P + M + EMAS + + E E N R
Sbjct: 2 QVLFLNLKSKDNNLRNRVVSGEITPARLSTMESSEMASAQRRQADEK----LMEENMRTA 57
Query: 145 SGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
S K+I + C +CG K++S+ P+ TC C W
Sbjct: 58 MMAKSEKSISDQL-TCGKCGQKKVSYTQAQTRSADEPMTTFCTCEICSHRW 107
>gi|164448538|ref|NP_001019643.2| transcription elongation factor A N-terminal and central
domain-containing protein [Bos taurus]
gi|117306417|gb|AAI26749.1| LOC504389 protein [Bos taurus]
gi|296470464|tpg|DAA12579.1| TPA: TFIIS central domain-containing protein 1 [Bos taurus]
Length = 378
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+ ++ ++ + YK R + N +P+N ++ +L G + P MTA E
Sbjct: 228 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 287
Query: 120 MASDKMQ 126
MAS +++
Sbjct: 288 MASQELK 294
>gi|259147828|emb|CAY81078.1| Bye1p [Saccharomyces cerevisiae EC1118]
Length = 594
Score = 37.4 bits (85), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 277 EFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 336
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 337 NMNASELANPDLQEFKEKRDK 357
>gi|349579558|dbj|GAA24720.1| K7_Bye1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 594
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 277 EFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 336
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 337 NMNASELANPDLQEFKEKRDK 357
>gi|190409818|gb|EDV13083.1| negative regulator of transcription elongation [Saccharomyces
cerevisiae RM11-1a]
gi|256271938|gb|EEU06959.1| Bye1p [Saccharomyces cerevisiae JAY291]
gi|365764652|gb|EHN06174.1| Bye1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 594
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 59 QVAISMESAMYE-----KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ A ++E +Y+ ++G + Y K R L N D KN E + V+ G + +V
Sbjct: 277 EFAHNLEEELYKACLNIEFGTLDKIYTEKVRSLYSNLKDKKNLELKAHVVEGKLPLNKLV 336
Query: 114 NMTAKEMASDKMQLWYENSRK 134
NM A E+A+ +Q + E K
Sbjct: 337 NMNASELANPDLQEFKEKRDK 357
>gi|114687798|ref|XP_001135670.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan troglodytes]
Length = 381
Score = 37.4 bits (85), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKAGLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 262 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 297
>gi|403255274|ref|XP_003920366.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Saimiri boliviensis
boliviensis]
gi|403255276|ref|XP_003920367.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Saimiri boliviensis
boliviensis]
gi|403255278|ref|XP_003920368.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Saimiri boliviensis
boliviensis]
Length = 350
Score = 37.0 bits (84), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 180 LYSALTTSST---------DQPKADLWQNFAREIEEHVFALYSKNIKKYKTCIRSKVANL 230
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ + G + P+ MT EMA+ +++
Sbjct: 231 KNPKNSHLKQNLFSGTMSPQEFAEMTVMEMANKELK 266
>gi|114687800|ref|XP_001135750.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan troglodytes]
gi|114687802|ref|XP_520934.2| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan troglodytes]
Length = 351
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKAGLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|67537382|ref|XP_662465.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
gi|40741749|gb|EAA60939.1| hypothetical protein AN4861.2 [Aspergillus nidulans FGSC A4]
Length = 386
Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 75 SSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+ E Y+ K R L N + N R +VL +V PE V MT +E+ SD+ +
Sbjct: 187 TKEPYRTKIRSLFQNLKNKSNPTLRVRVLSNEVTPERFVKMTHEELRSDEQR 238
>gi|323450413|gb|EGB06294.1| hypothetical protein AURANDRAFT_29341 [Aureococcus anophagefferens]
Length = 275
Score = 37.0 bits (84), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 21/134 (15%)
Query: 68 MYEKWGRSSET-----YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMAS 122
M+ +W ++ Y K R+L FN KN + R +V G V P + +M+ E+A+
Sbjct: 146 MHGRWANLADANVKRDYVAKLRQLSFNLK--KNPDLRARVAGGGVTPAELCSMSVDELAT 203
Query: 123 DKMQLWYENSRKGRAETNGRIFSGLVSPKN----IVY--GICKCSRCG----HKRMSFIP 172
++Q RK AE S KN +Y G CK ++ R P
Sbjct: 204 QEVQA----ERKKMAEFQHDARSLDWDKKNRDRKTMYPCGKCKSTKVSNYEKQTRSGDEP 259
Query: 173 LRRHITCLNCYQYW 186
+ + C +C W
Sbjct: 260 MTQFFECADCGNRW 273
>gi|21756669|dbj|BAC04930.1| unnamed protein product [Homo sapiens]
Length = 217
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 48 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 98
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 99 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 134
>gi|449482931|ref|XP_004174984.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Taeniopygia
guttata]
Length = 381
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+++A +E ++ ++ + YK R + N +PK+ + + G + P+ MT
Sbjct: 229 LELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFAEMTV 288
Query: 118 KEMASDKMQ 126
EMASD+++
Sbjct: 289 MEMASDELK 297
>gi|119619230|gb|EAW98824.1| hCG2043271, isoform CRA_a [Homo sapiens]
Length = 230
Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 48 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 98
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 99 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 134
>gi|224042778|ref|XP_002197835.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Taeniopygia
guttata]
Length = 360
Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 58 IQVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTA 117
+++A +E ++ ++ + YK R + N +PK+ + + G + P+ MT
Sbjct: 208 LELAKEIEEHIFALHAKNDKKYKNCIRSKISNLKNPKSCHLKHNLFSGTLSPKAFAEMTV 267
Query: 118 KEMASDKMQ 126
EMASD+++
Sbjct: 268 MEMASDELK 276
>gi|428183234|gb|EKX52092.1| hypothetical protein GUITHDRAFT_133829 [Guillardia theta CCMP2712]
Length = 390
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 21 DCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEK--WGR--SS 76
+ +R+++R+ L AL + D+ A + AI++E +MY+ +G+ S+
Sbjct: 251 NAVRDLIREKLCDALQPHVLPG-------DKYSA---LDAAIAIEHSMYQYRFFGKDESN 300
Query: 77 ETYKFKYRRLLFNFNDPKNHEFRKKVLL 104
YK + R +LFN D KN + R++V L
Sbjct: 301 SRYKGRARSILFNLRDSKNPDLRRRVRL 328
>gi|321454544|gb|EFX65711.1| hypothetical protein DAPPUDRAFT_32159 [Daphnia pulex]
Length = 338
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 88 FNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRK 134
FN DPKN +K++ + P +V M+ +E+AS ++ W E K
Sbjct: 1 FNIKDPKNLGLFRKIIEKQITPGQLVKMSTEELASKELAEWREQEAK 47
>gi|397468106|ref|XP_003805736.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Pan paniscus]
Length = 381
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 262 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 297
>gi|154146187|ref|NP_689847.2| transcription elongation factor A N-terminal and central
domain-containing protein [Homo sapiens]
Length = 381
Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 262 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 297
>gi|194377496|dbj|BAG57696.1| unnamed protein product [Homo sapiens]
Length = 381
Score = 36.6 bits (83), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 262 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 297
>gi|426395180|ref|XP_004063853.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 1 [Gorilla gorilla
gorilla]
Length = 381
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 211 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G P MT EMA+ +++
Sbjct: 262 KNPKNCHLQQNLLSGTTSPREFAEMTVMEMANKELK 297
>gi|189054986|dbj|BAG37970.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|326913628|ref|XP_003203138.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein-like [Meleagris gallopavo]
Length = 381
Score = 36.6 bits (83), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ +A DK D+ ++++ +E ++ ++ YK R + N
Sbjct: 211 LYKALTG----SAKDKEETDKW-----LELSKEIEEHVFALHSKNDRKYKNCIRSKISNL 261
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PK+ + + G + P+ MT EMASD+++
Sbjct: 262 KNPKSCNLKHNLFSGTLSPKAFAEMTVMEMASDELK 297
>gi|119619229|gb|EAW98823.1| hCG1798824 [Homo sapiens]
Length = 351
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|158255978|dbj|BAF83960.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|397468108|ref|XP_003805737.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Pan paniscus]
gi|397468110|ref|XP_003805738.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Pan paniscus]
Length = 351
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|357135111|ref|XP_003569155.1| PREDICTED: uncharacterized protein LOC100843157 isoform 1
[Brachypodium distachyon]
Length = 675
Score = 36.6 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 40/174 (22%)
Query: 42 AAHDKNVIDQVKACNP---IQVAISMESAMYEKWGRSSETYKFKYRRLLFNF-NDP---- 93
+A D + +D + P + + S+E + Y+ G + Y K R+L FN N P
Sbjct: 411 SALDTSSVDNENSYAPDVVVSIMASLEKSTYDSLGSDFQKYNQKMRKLEFNIKNSPVLRT 470
Query: 94 --KNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRIFSGLVSPK 151
N E VLL E +T E S+ E SR+ + T+ R
Sbjct: 471 RLMNKELDPPVLLTMSPAELKAGLTPAEKTSEP-----EESRRLQM-TDAR--------- 515
Query: 152 NIVYGICKCSRCGHKRMSFIPL-------RRHITCLNCYQYWASTNPEIRVLPI 198
C RC K++ + R + C++C W S+ I L +
Sbjct: 516 --------CERCTEKKVGISDIIHAGHGDRYQLECISCGHTWFSSRDAISSLTV 561
>gi|117949797|sp|Q8N8B7.2|TEANC_HUMAN RecName: Full=Transcription elongation factor A N-terminal and
central domain-containing protein; AltName: Full=TFIIS
central domain-containing protein 1
Length = 351
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+P+N ++ +L G P MT EMA+ +++
Sbjct: 232 KNPRNSHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|61554104|gb|AAX46508.1| hypothetical protein MGC17403 [Bos taurus]
Length = 326
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%)
Query: 60 VAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKE 119
+A +E+ ++ ++ + YK R + N +P+N ++ +L G + P MTA E
Sbjct: 227 LAQEIEAHVFALHPKNLQKYKTCIRSKVANLKNPRNSHLQQNLLSGTMSPREFAKMTAME 286
Query: 120 MASDKMQ 126
MAS +++
Sbjct: 287 MASQELK 293
>gi|344254957|gb|EGW11061.1| Death-inducer obliterator 1 [Cricetulus griseus]
Length = 803
Score = 36.6 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 59 QVAISMESAMYEKWGRSSETYKFKYRRLLFNFNDPKNH 96
++A+ +E M+ + + YK KYR ++FN DPKN
Sbjct: 740 KIALHIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQ 777
>gi|426395182|ref|XP_004063854.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 2 [Gorilla gorilla
gorilla]
gi|426395184|ref|XP_004063855.1| PREDICTED: transcription elongation factor A N-terminal and central
domain-containing protein isoform 3 [Gorilla gorilla
gorilla]
Length = 351
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 31 LYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETYKFKYRRLLFNF 90
LY AL+ S DQ KA A +E ++ + ++ + YK R + N
Sbjct: 181 LYAALTSSST---------DQPKADLWQNFAREIEEHVFTLYSKNIKKYKTCIRSKVANL 231
Query: 91 NDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQ 126
+PKN ++ +L G P MT EMA+ +++
Sbjct: 232 KNPKNCHLQQNLLSGTTSPREFAEMTVMEMANKELK 267
>gi|300708584|ref|XP_002996468.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
gi|239605773|gb|EEQ82797.1| hypothetical protein NCER_100432 [Nosema ceranae BRL01]
Length = 166
Score = 36.6 bits (83), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 84 RRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNGRI 143
R FN D N K+V G +KP+ + M+ ++M S ++ E RK E+ I
Sbjct: 59 RSKCFNLKDKNNPRICKEVYEGTIKPDEYILMSNEDMKSKDLK---EQERKAYEESLYDI 115
Query: 144 FSGLVSPKNIVYGICKCSRCGHKRMSF---------IPLRRHITCLNCYQYW 186
+ + ++ KCS CG ++ S+ P+ +TC+ C W
Sbjct: 116 QMPEIQAETDMF---KCSTCGQRKSSYRQLQTRSADEPMTTFVTCV-CGHKW 163
>gi|259146459|emb|CAY79716.1| Dst1p [Saccharomyces cerevisiae EC1118]
Length = 309
Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 29/172 (16%)
Query: 27 VRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYE--KWGRSSETYKFKYR 84
V K LY L+K E+ H I + A ++ES M + + YK +YR
Sbjct: 152 VLKALYDVLAK---ESEHPPQSI--------LHTAKAIESEMNKVNNCDTNEAAYKARYR 200
Query: 85 RLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRAETNGRI 143
+ N N + + K+ GD+ PE + AK++A + Q E +++ G
Sbjct: 201 IIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGAT 260
Query: 144 FSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
V+ + C +C K++S+ PL TC C W
Sbjct: 261 IERSVTDR------FTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306
>gi|365991701|ref|XP_003672679.1| hypothetical protein NDAI_0K02450 [Naumovozyma dairenensis CBS 421]
gi|343771455|emb|CCD27436.1| hypothetical protein NDAI_0K02450 [Naumovozyma dairenensis CBS 421]
Length = 667
Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 59 QVAISMESAMYEKW-----GRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIV 113
+ + ++ES +Y+ W + S+ Y K R L N DPKN + V+ + +V
Sbjct: 276 EFSKNLESELYKAWFDMEHDKLSKYYPEKVRNLFSNLKDPKNLNLKSHVINQSIPMSKLV 335
Query: 114 NMTAKEMASDKMQLWYE 130
M+ E+A+ +Q + E
Sbjct: 336 RMSVSELANPDLQQFKE 352
>gi|84998998|ref|XP_954220.1| transcription elongation factor [Theileria annulata]
gi|65305218|emb|CAI73543.1| transcription elongation factor, putative [Theileria annulata]
Length = 418
Score = 36.2 bits (82), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLW----YENSRK 134
Y + + + FN D KN F K+ + +++M++ +MASD+ +L E S +
Sbjct: 299 YNQQLKCIGFNLKDNKNTIFNYKLYNNIISINELIHMSSLQMASDEKKLQRNEILEQSLE 358
Query: 135 GRAETNGRIFSGLVSPKNIVYGICKCSRCGHK---------RMSFIPLRRHITCLNCYQY 185
+++ I + ++ K G KC++C K R S P+ +TCLNC
Sbjct: 359 A-CQSDWEIKNIFLNNK--TKGQFKCNKCNSKITTYYQLQTRSSDEPMTTFVTCLNCNNR 415
Query: 186 W 186
W
Sbjct: 416 W 416
>gi|167386526|ref|XP_001737794.1| transcription elongation factor S-II [Entamoeba dispar SAW760]
gi|165899246|gb|EDR25885.1| transcription elongation factor S-II, putative [Entamoeba dispar
SAW760]
Length = 171
Score = 36.2 bits (82), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 15/125 (12%)
Query: 71 KWGRSSETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYE 130
K+ +E + F R++L KN + + + P ++ M+ +MA + ++ E
Sbjct: 49 KYKEDNEKFNFHLRQILAGLR--KNKKLVDSLCSKKITPNELIEMSPDDMADETVKEIKE 106
Query: 131 NSRKGRAETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLN 181
K + I + N KCS+CG +++ P+ R +TC +
Sbjct: 107 RIIKDEEDKKKPIDISKIPDSNEF----KCSKCGSRKIQETLAQTRSADEPMTRFLTCAS 162
Query: 182 CYQYW 186
C +W
Sbjct: 163 CGFFW 167
>gi|327408335|emb|CCA30099.1| transcription factor S-II central domain-containing protein,
putative [Neospora caninum Liverpool]
Length = 1381
Score = 36.2 bits (82), Expect = 7.4, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 76 SETYKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMA 121
S K ++ LL N NHE RKKVL G + +V M + E+A
Sbjct: 920 SRRQKQRFFELLSNLKRENNHELRKKVLTGQISVGRLVTMESAELA 965
>gi|4217|emb|CAA24928.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 128
Score = 35.8 bits (81), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 16/118 (13%)
Query: 79 YKFKYRRLLFNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKM-QLWYENSRKGRA 137
YK +YR + N N + + K+ GD+ PE + AK++A + Q E +++
Sbjct: 14 YKARYRIIYSNVISKNNPDLKHKIANGDITPEFLATCDAKDLAPAPLKQKIEEIAKQNLY 73
Query: 138 ETNGRIFSGLVSPKNIVYGICKCSRCGHKRMSFI---------PLRRHITCLNCYQYW 186
G V+ + C +C K++S+ PL TC C W
Sbjct: 74 NAQGATIERSVTDRFT------CGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 125
>gi|335292756|ref|XP_003356790.1| PREDICTED: DDB1- and CUL4-associated factor 4 isoform 2 [Sus
scrofa]
Length = 433
Score = 35.8 bits (81), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 88 FNFNDPKNHEFRKKVLLGDVKPETIVNMTAKEMASDKMQLWYENSRKGRAETNG-RIFS 145
+ F+ KN FR + P T ++ KEM S ++QL E R+G+A+TN R+F+
Sbjct: 68 YYFDPEKNRYFRLLPGHNNCNPLTKESIRQKEMESKRLQLLEEEDRQGKADTNSDRLFT 126
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 35.8 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 20 NDCIREIVRKNLYGALSKVSIEAAHDKNVIDQVKACNPIQVAISMESAMYEKWGRSSETY 79
N+ +R+ +R++L L K ++ K +V ++A ++E M+ + Y
Sbjct: 635 NNQMRQNIRRSLTDILYKRVSDSDDLKMTESEVA-----RLAFAIEKEMFNLCLNTDSKY 689
Query: 80 KFKYRRLLFNFNDPKNHEFRKKVL 103
K KYR L+FN DPK +L
Sbjct: 690 KRKYRSLMFNLKDPKKQNIFSSML 713
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.135 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,923,776,826
Number of Sequences: 23463169
Number of extensions: 106833862
Number of successful extensions: 259007
Number of sequences better than 100.0: 898
Number of HSP's better than 100.0 without gapping: 754
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 257988
Number of HSP's gapped (non-prelim): 930
length of query: 198
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 63
effective length of database: 9,191,667,552
effective search space: 579075055776
effective search space used: 579075055776
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 73 (32.7 bits)