Query 036391
Match_columns 389
No_of_seqs 185 out of 1752
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 21:04:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036391.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036391hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.5 4.3E-11 1.5E-15 109.4 26.8 196 105-337 68-283 (315)
2 2woz_A Kelch repeat and BTB do 99.4 2.4E-10 8.1E-15 104.6 27.6 194 106-337 80-293 (318)
3 3ii7_A Kelch-like protein 7; p 99.4 3.3E-10 1.1E-14 103.0 27.4 210 90-338 51-279 (306)
4 2xn4_A Kelch-like protein 2; s 99.4 1.8E-10 6.1E-15 104.5 22.8 207 91-337 58-282 (302)
5 2vpj_A Kelch-like protein 12; 99.3 2.7E-10 9.3E-15 103.3 23.2 207 91-337 59-284 (301)
6 1zgk_A Kelch-like ECH-associat 99.3 1.5E-10 5.3E-15 105.4 20.9 195 104-338 90-294 (308)
7 4asc_A Kelch repeat and BTB do 99.2 3.2E-09 1.1E-13 96.9 24.0 198 104-337 13-227 (315)
8 3ii7_A Kelch-like protein 7; p 99.2 1.2E-09 4.1E-14 99.3 20.4 194 103-337 23-231 (306)
9 2vpj_A Kelch-like protein 12; 99.2 1.2E-09 4.2E-14 98.9 20.5 195 104-338 31-238 (301)
10 2xn4_A Kelch-like protein 2; s 99.2 8.3E-10 2.8E-14 100.1 19.2 195 104-338 30-236 (302)
11 1zgk_A Kelch-like ECH-associat 99.2 7.9E-10 2.7E-14 100.7 16.6 197 104-337 39-246 (308)
12 1fs1_A SKP2 F-BOX, cyclin A/CD 99.1 3.6E-11 1.2E-15 78.7 3.3 42 2-43 9-50 (53)
13 2e31_A FBS1, F-box only protei 99.1 4.8E-11 1.6E-15 106.0 4.7 48 2-49 51-99 (297)
14 2uvk_A YJHT; unknown function, 99.1 4.2E-09 1.4E-13 97.8 17.7 218 91-339 16-302 (357)
15 2woz_A Kelch repeat and BTB do 99.0 2.2E-08 7.6E-13 91.4 20.3 198 104-337 24-237 (318)
16 2ovr_B FBW7, F-BOX/WD repeat p 99.0 1.2E-06 4.1E-11 83.5 30.3 275 1-334 18-311 (445)
17 2uvk_A YJHT; unknown function, 98.9 1.4E-07 4.9E-12 87.4 21.2 200 104-337 86-348 (357)
18 2zwa_A Leucine carboxyl methyl 98.9 8.3E-08 2.8E-12 97.1 20.1 203 104-339 412-643 (695)
19 3v7d_B Cell division control p 98.9 1.1E-06 3.8E-11 84.0 26.8 45 2-46 15-60 (464)
20 1p22_A F-BOX/WD-repeat protein 98.7 1.3E-06 4.5E-11 83.0 21.7 277 2-335 11-329 (435)
21 1k3i_A Galactose oxidase precu 98.5 1.5E-06 5.2E-11 87.4 14.3 106 105-236 220-329 (656)
22 2zwa_A Leucine carboxyl methyl 98.3 1.2E-05 4.2E-10 81.2 15.4 159 162-339 410-591 (695)
23 1k3i_A Galactose oxidase precu 98.0 5.3E-05 1.8E-09 76.1 14.0 200 107-337 169-384 (656)
24 3l2o_B F-box only protein 4; s 98.0 2.2E-06 7.4E-11 75.3 2.7 49 2-50 5-53 (312)
25 2ast_B S-phase kinase-associat 97.5 3.5E-05 1.2E-09 70.4 2.6 39 2-40 9-47 (336)
26 2p1m_B Transport inhibitor res 97.1 0.00015 5.3E-09 71.6 2.1 35 1-35 5-40 (594)
27 3ogk_B Coronatine-insensitive 96.5 0.00087 3E-08 66.1 2.2 33 3-35 14-47 (592)
28 3jrp_A Fusion protein of prote 96.3 0.28 9.4E-06 44.2 18.1 68 257-332 171-241 (379)
29 3ei3_B DNA damage-binding prot 95.9 0.95 3.3E-05 41.0 22.7 195 96-334 88-285 (383)
30 3mbr_X Glutamine cyclotransfer 95.6 0.64 2.2E-05 39.8 15.6 113 205-339 28-142 (243)
31 3jro_A Fusion protein of prote 95.4 0.83 2.8E-05 46.2 18.4 194 97-332 24-239 (753)
32 4gqb_B Methylosome protein 50; 95.0 1.2 4E-05 40.3 16.6 200 93-337 92-295 (344)
33 3nol_A Glutamine cyclotransfer 94.6 0.81 2.8E-05 39.7 13.4 113 205-339 50-164 (262)
34 1gxr_A ESG1, transducin-like e 94.5 2.3 7.7E-05 37.3 22.0 197 92-337 60-261 (337)
35 3dsm_A Uncharacterized protein 94.4 2.6 8.8E-05 37.6 20.5 200 94-339 2-221 (328)
36 4e54_B DNA damage-binding prot 94.4 1.7 5.9E-05 40.3 16.7 197 96-335 134-331 (435)
37 2ojh_A Uncharacterized protein 94.0 2.6 8.9E-05 35.9 17.3 201 92-337 50-264 (297)
38 3jrp_A Fusion protein of prote 93.7 2.8 9.5E-05 37.4 16.2 73 258-337 221-294 (379)
39 2iwa_A Glutamine cyclotransfer 93.6 2.7 9.3E-05 36.5 14.9 111 208-339 32-144 (266)
40 4aez_A CDC20, WD repeat-contai 93.5 4.4 0.00015 36.9 20.7 190 94-335 103-297 (401)
41 2hqs_A Protein TOLB; TOLB, PAL 93.3 4.9 0.00017 37.1 20.7 184 104-337 203-393 (415)
42 1l0q_A Surface layer protein; 93.2 4.6 0.00016 36.4 22.2 190 92-335 40-237 (391)
43 1l0q_A Surface layer protein; 93.0 5 0.00017 36.1 20.8 189 96-337 87-281 (391)
44 1k8k_C P40, ARP2/3 complex 41 92.9 4.8 0.00017 35.7 19.4 196 97-335 23-237 (372)
45 3dwl_C Actin-related protein 2 92.8 1.4 4.9E-05 39.6 12.8 189 102-334 31-239 (377)
46 3u4y_A Uncharacterized protein 92.7 4.8 0.00016 35.3 21.8 193 94-334 9-210 (331)
47 3hfq_A Uncharacterized protein 92.5 5.3 0.00018 35.4 23.7 74 257-338 250-326 (347)
48 3dsm_A Uncharacterized protein 92.5 5.4 0.00018 35.4 20.9 196 93-335 52-257 (328)
49 3nok_A Glutaminyl cyclase; bet 92.3 2.5 8.7E-05 36.6 12.7 110 205-339 62-173 (268)
50 4g56_B MGC81050 protein; prote 92.1 4.3 0.00015 36.5 15.0 199 92-337 103-307 (357)
51 3scy_A Hypothetical bacterial 92.1 4.6 0.00016 36.0 15.2 116 206-337 220-345 (361)
52 4aow_A Guanine nucleotide-bind 91.8 6.2 0.00021 34.5 18.3 31 303-333 309-339 (340)
53 3fm0_A Protein CIAO1; WDR39,SG 91.7 6.9 0.00023 34.8 17.9 184 101-329 35-223 (345)
54 3g4e_A Regucalcin; six bladed 91.4 6.7 0.00023 34.1 21.9 199 94-339 24-238 (297)
55 3hfq_A Uncharacterized protein 91.4 7.2 0.00025 34.4 18.3 122 206-337 49-178 (347)
56 1yfq_A Cell cycle arrest prote 91.3 7.1 0.00024 34.2 19.9 199 96-335 71-286 (342)
57 3q7m_A Lipoprotein YFGL, BAMB; 90.8 8.8 0.0003 34.5 21.0 197 90-337 99-302 (376)
58 1pby_B Quinohemoprotein amine 90.8 7.7 0.00026 33.7 15.4 98 222-339 220-319 (337)
59 1q7f_A NHL, brain tumor CG1071 90.6 7.5 0.00026 33.3 22.6 203 92-339 38-246 (286)
60 3bws_A Protein LP49; two-domai 90.6 10 0.00034 34.6 21.1 193 92-337 178-396 (433)
61 3i2n_A WD repeat-containing pr 90.2 9.1 0.00031 33.6 22.1 197 96-332 131-354 (357)
62 3no2_A Uncharacterized protein 89.9 8.3 0.00028 33.3 14.1 191 96-336 7-200 (276)
63 3mkq_A Coatomer beta'-subunit; 89.6 18 0.00062 36.2 19.5 189 94-335 66-263 (814)
64 4aez_A CDC20, WD repeat-contai 89.5 12 0.00041 33.9 21.8 99 220-335 283-384 (401)
65 2aq5_A Coronin-1A; WD40 repeat 89.2 12 0.00043 33.8 21.3 205 94-337 93-307 (402)
66 1ri6_A Putative isomerase YBHE 88.7 11 0.00039 32.7 20.1 109 221-337 151-270 (343)
67 2pm9_A Protein WEB1, protein t 87.9 15 0.00051 33.1 16.0 95 222-333 241-339 (416)
68 3bg1_A Protein SEC13 homolog; 87.9 11 0.00038 32.9 13.7 60 264-331 184-247 (316)
69 2z2n_A Virginiamycin B lyase; 87.7 12 0.00041 31.8 20.2 192 89-335 104-299 (299)
70 4gga_A P55CDC, cell division c 87.6 16 0.00056 33.3 20.6 202 88-336 109-315 (420)
71 3q7m_A Lipoprotein YFGL, BAMB; 87.0 17 0.00057 32.6 16.2 117 201-337 47-168 (376)
72 3vgz_A Uncharacterized protein 86.8 15 0.00053 32.1 25.6 202 94-336 100-308 (353)
73 1k8k_C P40, ARP2/3 complex 41 86.8 16 0.00055 32.2 17.5 142 163-330 29-172 (372)
74 3mmy_A MRNA export factor; mRN 86.4 16 0.00055 31.9 18.4 33 303-335 276-308 (368)
75 4a11_B DNA excision repair pro 85.7 19 0.00065 32.1 19.7 202 97-334 59-279 (408)
76 4a11_B DNA excision repair pro 85.5 20 0.00067 32.0 18.0 101 221-334 267-368 (408)
77 1pgu_A Actin interacting prote 84.9 28 0.00094 33.2 19.5 72 257-336 171-243 (615)
78 3vgz_A Uncharacterized protein 84.9 19 0.00066 31.4 16.5 148 163-337 68-221 (353)
79 2hqs_A Protein TOLB; TOLB, PAL 84.8 24 0.0008 32.4 22.4 187 104-337 159-350 (415)
80 3dwl_C Actin-related protein 2 84.6 2.4 8.3E-05 38.0 7.6 140 164-331 33-177 (377)
81 3sjl_D Methylamine dehydrogena 84.3 17 0.00059 33.3 13.2 118 206-339 236-372 (386)
82 3vl1_A 26S proteasome regulato 83.2 26 0.00088 31.6 19.2 101 221-331 313-419 (420)
83 1got_B GT-beta; complex (GTP-b 83.1 24 0.00081 31.1 21.1 95 221-334 164-260 (340)
84 1ri6_A Putative isomerase YBHE 82.9 23 0.00077 30.7 18.6 118 207-337 188-316 (343)
85 1gxr_A ESG1, transducin-like e 82.7 23 0.00077 30.5 21.3 190 94-337 108-302 (337)
86 3zwl_B Eukaryotic translation 82.3 25 0.00084 30.7 20.5 70 257-337 186-255 (369)
87 1r5m_A SIR4-interacting protei 82.2 27 0.00093 31.2 18.6 194 92-331 215-425 (425)
88 3fm0_A Protein CIAO1; WDR39,SG 81.6 27 0.00093 30.8 16.5 102 221-336 83-186 (345)
89 1rwi_B Serine/threonine-protei 80.8 24 0.00081 29.5 20.5 188 92-333 75-266 (270)
90 3scy_A Hypothetical bacterial 80.0 31 0.0011 30.4 21.0 77 257-337 165-248 (361)
91 2xyi_A Probable histone-bindin 79.4 38 0.0013 31.0 15.0 101 221-334 300-413 (430)
92 3hrp_A Uncharacterized protein 79.2 21 0.00073 32.8 12.0 113 206-337 140-255 (409)
93 3e5z_A Putative gluconolactona 78.7 30 0.001 29.5 23.2 197 96-339 42-254 (296)
94 3azo_A Aminopeptidase; POP fam 78.0 52 0.0018 31.9 20.9 197 104-337 161-375 (662)
95 2pm7_B Protein transport prote 77.9 33 0.0011 29.4 19.4 67 258-332 170-239 (297)
96 1nir_A Nitrite reductase; hemo 77.8 50 0.0017 31.6 20.3 200 93-337 147-361 (543)
97 1npe_A Nidogen, entactin; glyc 77.2 32 0.0011 29.0 18.7 112 207-337 90-204 (267)
98 1sq9_A Antiviral protein SKI8; 77.0 40 0.0014 29.9 18.9 119 207-333 244-397 (397)
99 2ojh_A Uncharacterized protein 76.8 31 0.0011 28.7 19.3 186 103-337 21-212 (297)
100 3vl1_A 26S proteasome regulato 76.7 42 0.0014 30.1 22.5 194 94-338 108-331 (420)
101 3u4y_A Uncharacterized protein 76.1 38 0.0013 29.2 18.8 117 206-337 185-310 (331)
102 3bg1_A Protein SEC13 homolog; 76.0 38 0.0013 29.3 17.3 73 259-339 229-302 (316)
103 2ynn_A Coatomer subunit beta'; 75.6 38 0.0013 29.1 19.3 68 257-336 197-264 (304)
104 3v65_B Low-density lipoprotein 75.0 49 0.0017 30.0 22.0 193 94-337 87-283 (386)
105 1p22_A F-BOX/WD-repeat protein 75.0 49 0.0017 30.1 19.0 114 204-336 302-419 (435)
106 2ovr_B FBW7, F-BOX/WD repeat p 75.0 50 0.0017 30.1 24.0 186 90-335 165-352 (445)
107 2dg1_A DRP35, lactonase; beta 73.5 45 0.0015 28.9 21.0 206 92-339 53-271 (333)
108 3frx_A Guanine nucleotide-bind 73.0 46 0.0016 28.8 16.8 63 262-335 169-231 (319)
109 3fvz_A Peptidyl-glycine alpha- 72.9 48 0.0016 28.9 17.6 195 105-337 70-283 (329)
110 1nir_A Nitrite reductase; hemo 72.3 24 0.00083 33.8 10.8 107 221-335 346-462 (543)
111 2aq5_A Coronin-1A; WD40 repeat 71.7 56 0.0019 29.2 20.4 201 96-339 146-350 (402)
112 4g56_B MGC81050 protein; prote 71.3 55 0.0019 29.0 18.5 93 221-332 249-344 (357)
113 4ery_A WD repeat-containing pr 70.9 49 0.0017 28.3 21.5 98 221-336 129-228 (312)
114 2bkl_A Prolyl endopeptidase; m 70.6 85 0.0029 30.9 24.4 193 105-338 203-404 (695)
115 3mmy_A MRNA export factor; mRN 70.5 38 0.0013 29.5 11.1 70 258-337 54-123 (368)
116 2ad6_A Methanol dehydrogenase 70.5 50 0.0017 31.9 12.6 124 201-337 56-191 (571)
117 4a2l_A BT_4663, two-component 70.5 92 0.0031 31.2 26.4 216 89-337 220-442 (795)
118 3ow8_A WD repeat-containing pr 68.8 58 0.002 28.3 18.9 96 221-335 186-283 (321)
119 2pm7_B Protein transport prote 68.6 55 0.0019 27.9 16.6 72 259-337 220-292 (297)
120 3bws_A Protein LP49; two-domai 67.9 69 0.0024 28.8 24.1 189 96-331 225-432 (433)
121 4aow_A Guanine nucleotide-bind 67.8 58 0.002 27.9 19.5 64 261-335 187-250 (340)
122 1jmx_B Amine dehydrogenase; ox 67.8 59 0.002 28.0 12.1 112 207-333 10-136 (349)
123 2mad_H Methylamine dehydrogena 67.6 70 0.0024 28.8 13.7 71 257-337 278-356 (373)
124 1r5m_A SIR4-interacting protei 67.3 68 0.0023 28.4 22.6 97 221-337 227-325 (425)
125 4h5i_A Guanine nucleotide-exch 67.1 68 0.0023 28.5 19.7 65 257-332 280-344 (365)
126 1yfq_A Cell cycle arrest prote 66.9 61 0.0021 27.8 18.4 182 96-332 25-226 (342)
127 2vdu_B TRNA (guanine-N(7)-)-me 66.8 77 0.0026 28.9 22.2 66 258-335 210-275 (450)
128 3jro_A Fusion protein of prote 66.6 93 0.0032 31.0 14.1 97 221-332 31-133 (753)
129 3lrv_A PRE-mRNA-splicing facto 66.6 66 0.0022 28.1 20.3 203 88-336 88-299 (343)
130 1flg_A Protein (quinoprotein e 66.5 68 0.0023 31.0 12.6 126 201-337 62-199 (582)
131 1rwi_B Serine/threonine-protei 66.1 56 0.0019 27.1 14.7 107 207-336 77-185 (270)
132 3v9f_A Two-component system se 66.0 1.1E+02 0.0038 30.5 20.3 111 208-338 374-485 (781)
133 2dg1_A DRP35, lactonase; beta 65.4 67 0.0023 27.7 12.2 115 206-337 54-177 (333)
134 1kb0_A Quinohemoprotein alcoho 64.7 68 0.0023 31.7 12.4 124 201-337 71-205 (677)
135 3v7d_B Cell division control p 64.5 85 0.0029 28.6 24.8 94 221-335 290-385 (464)
136 4a2l_A BT_4663, two-component 64.4 1.2E+02 0.0041 30.3 22.3 152 165-337 236-392 (795)
137 1qks_A Cytochrome CD1 nitrite 64.2 1.1E+02 0.0036 29.6 21.6 198 94-337 166-379 (567)
138 3e5z_A Putative gluconolactona 64.1 66 0.0023 27.2 16.7 104 207-337 182-292 (296)
139 1erj_A Transcriptional repress 63.3 84 0.0029 28.1 19.2 97 221-332 187-288 (393)
140 3zwl_B Eukaryotic translation 62.8 75 0.0026 27.4 13.2 103 221-331 96-206 (369)
141 3f3f_A Nucleoporin SEH1; struc 62.8 71 0.0024 27.1 14.7 70 258-333 71-145 (351)
142 2pbi_B Guanine nucleotide-bind 62.7 81 0.0028 27.8 21.1 182 97-328 169-354 (354)
143 2z2n_A Virginiamycin B lyase; 62.5 68 0.0023 26.8 21.2 196 89-339 20-220 (299)
144 2p4o_A Hypothetical protein; p 61.9 77 0.0026 27.2 13.9 107 206-333 41-149 (306)
145 3vu4_A KMHSV2; beta-propeller 61.6 85 0.0029 27.6 19.0 67 257-333 206-273 (355)
146 3m0c_C LDL receptor, low-densi 61.2 1.4E+02 0.0049 30.1 25.4 161 164-358 493-658 (791)
147 1erj_A Transcriptional repress 60.5 94 0.0032 27.8 24.5 201 93-335 133-345 (393)
148 1sq9_A Antiviral protein SKI8; 60.4 89 0.0031 27.5 22.6 69 261-335 199-271 (397)
149 1pby_B Quinohemoprotein amine 60.3 80 0.0027 26.9 14.9 111 207-336 44-168 (337)
150 3iz6_a 40S ribosomal protein R 60.2 93 0.0032 27.6 19.9 198 97-332 173-376 (380)
151 3v64_C Agrin; beta propeller, 60.2 92 0.0032 27.6 22.5 191 94-337 44-240 (349)
152 2fp8_A Strictosidine synthase; 59.7 78 0.0027 27.4 10.9 153 89-278 131-313 (322)
153 2hes_X YDR267CP; beta-propelle 59.5 63 0.0021 28.1 10.2 73 257-337 118-190 (330)
154 3k26_A Polycomb protein EED; W 59.3 87 0.003 27.0 21.6 68 258-331 299-366 (366)
155 1vyh_C Platelet-activating fac 59.3 1E+02 0.0035 27.8 20.6 65 258-334 308-372 (410)
156 3gre_A Serine/threonine-protei 58.6 1E+02 0.0035 27.7 15.7 102 220-337 191-298 (437)
157 3sov_A LRP-6, low-density lipo 58.4 91 0.0031 27.3 11.0 22 207-231 46-67 (318)
158 3sfz_A APAF-1, apoptotic pepti 58.0 1.9E+02 0.0065 30.5 19.0 198 94-335 668-875 (1249)
159 3iuj_A Prolyl endopeptidase; h 57.9 1.5E+02 0.005 29.2 20.1 116 206-338 290-412 (693)
160 1kv9_A Type II quinohemoprotei 57.8 80 0.0028 31.1 11.5 123 201-337 60-193 (668)
161 1npe_A Nidogen, entactin; glyc 57.6 83 0.0028 26.2 23.7 192 93-337 46-245 (267)
162 1jmx_B Amine dehydrogenase; ox 57.3 54 0.0018 28.3 9.4 98 222-339 234-334 (349)
163 1pgu_A Actin interacting prote 57.1 1.3E+02 0.0045 28.3 20.5 64 257-332 552-615 (615)
164 1yiq_A Quinohemoprotein alcoho 56.9 87 0.003 31.0 11.6 124 201-337 64-198 (689)
165 2qe8_A Uncharacterized protein 56.6 84 0.0029 27.6 10.6 74 203-277 71-153 (343)
166 3frx_A Guanine nucleotide-bind 56.2 92 0.0031 26.8 10.7 69 259-335 31-100 (319)
167 3iz6_a 40S ribosomal protein R 55.9 1.1E+02 0.0038 27.1 17.8 72 257-335 260-333 (380)
168 1n7d_A LDL receptor, low-densi 55.9 97 0.0033 30.7 11.8 113 207-337 507-620 (699)
169 1pjx_A Dfpase, DIISOPROPYLFLUO 55.1 96 0.0033 26.2 23.1 198 102-339 44-265 (314)
170 4gga_A P55CDC, cell division c 55.0 1.1E+02 0.0036 27.7 11.3 94 220-331 300-395 (420)
171 2ynn_A Coatomer subunit beta'; 54.5 80 0.0027 27.0 9.9 67 257-335 24-90 (304)
172 1q7f_A NHL, brain tumor CG1071 54.4 95 0.0033 26.0 23.2 190 92-331 86-280 (286)
173 1ijq_A LDL receptor, low-densi 54.2 1.1E+02 0.0037 26.6 21.9 112 206-337 87-201 (316)
174 3lrv_A PRE-mRNA-splicing facto 53.8 1.1E+02 0.0038 26.5 12.6 97 222-335 105-205 (343)
175 2pm9_A Protein WEB1, protein t 53.4 1.2E+02 0.0041 26.8 16.8 105 221-335 188-298 (416)
176 3mkq_A Coatomer beta'-subunit; 53.0 1.8E+02 0.0061 28.7 21.4 186 97-335 28-221 (814)
177 3dm0_A Maltose-binding peripla 53.0 1.7E+02 0.0059 28.5 17.8 100 221-334 494-595 (694)
178 1yr2_A Prolyl oligopeptidase; 52.9 1.8E+02 0.0062 28.7 20.5 116 206-337 326-447 (741)
179 3hrp_A Uncharacterized protein 52.8 1.3E+02 0.0046 27.2 21.4 205 89-337 136-360 (409)
180 2qc5_A Streptogramin B lactona 52.8 1E+02 0.0034 25.7 20.0 195 89-338 25-224 (300)
181 3c75_H MADH, methylamine dehyd 51.8 1.5E+02 0.005 27.4 13.5 69 257-335 330-406 (426)
182 3v9f_A Two-component system se 51.8 1.9E+02 0.0066 28.7 21.3 203 93-337 322-530 (781)
183 3dr2_A Exported gluconolactona 51.6 1.1E+02 0.0039 26.0 17.4 101 221-339 169-275 (305)
184 2qc5_A Streptogramin B lactona 51.5 1.1E+02 0.0036 25.6 20.7 196 89-339 67-267 (300)
185 2z3z_A Dipeptidyl aminopeptida 51.4 1.8E+02 0.0062 28.2 20.1 154 162-337 233-397 (706)
186 1yiq_A Quinohemoprotein alcoho 50.7 1.9E+02 0.0066 28.4 15.2 128 202-337 116-290 (689)
187 4a0p_A LRP6, LRP-6, low-densit 50.4 1.9E+02 0.0064 28.2 23.0 179 103-335 14-201 (628)
188 3g4e_A Regucalcin; six bladed 50.2 1.2E+02 0.004 25.8 20.2 111 206-335 63-186 (297)
189 1kv9_A Type II quinohemoprotei 49.9 2E+02 0.0067 28.2 15.1 30 202-235 112-143 (668)
190 4ggc_A P55CDC, cell division c 49.9 1.2E+02 0.0039 25.6 20.4 67 92-175 34-100 (318)
191 2xzm_R RACK1; ribosome, transl 49.7 1.3E+02 0.0044 26.1 11.6 73 257-335 38-111 (343)
192 2ghs_A AGR_C_1268P; regucalcin 49.6 1.3E+02 0.0044 26.1 13.9 107 208-337 61-174 (326)
193 3no2_A Uncharacterized protein 49.0 1.2E+02 0.0042 25.6 16.8 147 163-339 14-163 (276)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 48.5 1.2E+02 0.0042 25.5 12.6 54 207-265 28-90 (314)
195 2kwv_A RAD30 homolog B, DNA po 48.3 8.9 0.0003 22.9 1.6 17 2-18 21-37 (48)
196 4gqb_B Methylosome protein 50; 48.1 1.4E+02 0.0049 26.1 12.5 62 268-336 102-163 (344)
197 3dm0_A Maltose-binding peripla 47.9 2E+02 0.007 27.9 21.0 27 304-330 666-692 (694)
198 2j04_A TAU60, YPL007P, hypothe 47.3 63 0.0021 31.4 8.3 31 303-333 132-162 (588)
199 1w6s_A Methanol dehydrogenase 46.8 1.7E+02 0.0058 28.4 11.6 124 201-337 56-197 (599)
200 3vu4_A KMHSV2; beta-propeller 46.1 1.5E+02 0.0052 25.9 16.9 33 303-335 198-231 (355)
201 3mbr_X Glutamine cyclotransfer 46.1 1.3E+02 0.0046 25.3 16.3 144 163-339 42-188 (243)
202 1got_B GT-beta; complex (GTP-b 45.5 1.5E+02 0.0051 25.6 21.2 183 94-328 154-340 (340)
203 1nr0_A Actin interacting prote 45.5 2.1E+02 0.0072 27.3 18.6 67 257-334 158-224 (611)
204 3dw8_B Serine/threonine-protei 44.2 68 0.0023 28.9 8.1 73 257-334 188-261 (447)
205 3odt_A Protein DOA1; ubiquitin 44.0 1.4E+02 0.0048 24.9 21.6 191 92-335 27-218 (313)
206 3ei3_B DNA damage-binding prot 43.9 1.6E+02 0.0056 25.7 19.8 94 221-331 141-236 (383)
207 3p5b_L Low density lipoprotein 43.5 1.9E+02 0.0064 26.2 20.0 112 206-337 169-283 (400)
208 2iwa_A Glutamine cyclotransfer 43.3 1.6E+02 0.0053 25.2 20.3 194 94-332 31-238 (266)
209 1kb0_A Quinohemoprotein alcoho 43.2 2.5E+02 0.0085 27.5 14.8 33 305-337 247-298 (677)
210 4e54_B DNA damage-binding prot 42.9 1.9E+02 0.0065 26.1 15.5 95 221-332 187-283 (435)
211 3v65_B Low-density lipoprotein 42.7 1.9E+02 0.0064 26.0 20.6 209 93-357 126-343 (386)
212 1sgh_B Ezrin-radixin-moesin bi 41.7 9.2 0.00031 21.8 0.9 11 378-388 9-19 (39)
213 3ow8_A WD repeat-containing pr 40.4 1.8E+02 0.0061 25.0 21.0 97 220-335 143-241 (321)
214 3amr_A 3-phytase; beta-propell 40.2 2.1E+02 0.007 25.7 22.2 209 92-339 38-273 (355)
215 2oiz_A Aromatic amine dehydrog 39.7 2E+02 0.0068 25.4 12.4 69 257-337 265-340 (361)
216 1ddw_A GLGF-domain protein hom 39.6 54 0.0019 24.3 5.2 40 104-152 11-51 (120)
217 2zvv_Y Cyclin-dependent kinase 38.8 9.9 0.00034 19.2 0.7 17 373-389 2-18 (26)
218 3i2n_A WD repeat-containing pr 38.1 1.9E+02 0.0064 24.7 22.8 108 207-332 179-292 (357)
219 1nr0_A Actin interacting prote 37.6 1.3E+02 0.0043 29.0 9.2 64 257-331 459-522 (611)
220 2vdu_B TRNA (guanine-N(7)-)-me 37.6 2.3E+02 0.0079 25.6 23.3 70 257-335 318-397 (450)
221 3sfz_A APAF-1, apoptotic pepti 37.6 3.8E+02 0.013 28.1 22.0 195 92-337 624-834 (1249)
222 3f3f_A Nucleoporin SEH1; struc 37.0 1.9E+02 0.0064 24.3 22.8 36 303-338 309-345 (351)
223 1egx_A VAsp, vasodilator-stimu 36.3 62 0.0021 23.7 5.1 43 104-152 11-53 (115)
224 3nok_A Glutaminyl cyclase; bet 35.6 2.1E+02 0.0072 24.5 13.0 115 204-339 102-219 (268)
225 3m0c_C LDL receptor, low-densi 35.3 3.6E+02 0.012 27.1 22.4 110 207-338 482-596 (791)
226 2p4o_A Hypothetical protein; p 34.9 2.1E+02 0.0072 24.3 21.9 197 93-337 41-247 (306)
227 4h5i_A Guanine nucleotide-exch 34.7 2.4E+02 0.008 24.8 15.9 33 303-335 272-304 (365)
228 1evh_A WH1 domain, protein (ME 34.5 68 0.0023 23.4 5.0 42 104-152 11-52 (112)
229 4hw6_A Hypothetical protein, I 34.3 2.7E+02 0.0093 25.4 13.7 114 201-334 141-262 (433)
230 2z3z_A Dipeptidyl aminopeptida 34.2 3.3E+02 0.011 26.3 25.9 194 104-334 235-438 (706)
231 1flg_A Protein (quinoprotein e 33.5 1.9E+02 0.0063 27.9 9.5 78 254-337 65-142 (582)
232 2ecf_A Dipeptidyl peptidase IV 32.8 3.5E+02 0.012 26.3 20.0 192 105-336 264-464 (741)
233 1vyh_C Platelet-activating fac 32.8 2.7E+02 0.0091 24.9 21.5 24 312-335 308-331 (410)
234 3k26_A Polycomb protein EED; W 32.2 2.4E+02 0.0081 24.0 22.4 29 305-333 290-320 (366)
235 2ghs_A AGR_C_1268P; regucalcin 32.1 2.5E+02 0.0084 24.2 21.7 199 94-339 60-268 (326)
236 3pe7_A Oligogalacturonate lyas 31.9 1.1E+02 0.0038 26.9 7.2 32 306-337 86-117 (388)
237 4gq1_A NUP37; propeller, trans 31.8 2.7E+02 0.0093 24.6 12.6 67 257-335 155-222 (393)
238 1i2h_A PSD-ZIP45(homer-1C/VESL 31.4 82 0.0028 24.9 5.3 40 104-152 16-56 (168)
239 3hxj_A Pyrrolo-quinoline quino 30.6 2.4E+02 0.0084 23.7 9.3 29 207-239 147-175 (330)
240 4ery_A WD repeat-containing pr 30.3 2.4E+02 0.0083 23.6 20.9 95 221-330 214-311 (312)
241 3p5b_L Low density lipoprotein 29.5 3.1E+02 0.011 24.6 24.1 178 134-358 161-346 (400)
242 3tc9_A Hypothetical hydrolase; 28.8 3.3E+02 0.011 24.7 15.7 110 207-337 149-263 (430)
243 3amr_A 3-phytase; beta-propell 28.6 3.2E+02 0.011 24.5 18.2 101 221-330 99-209 (355)
244 2xyi_A Probable histone-bindin 27.6 3.3E+02 0.011 24.3 11.9 66 257-331 243-309 (430)
245 3fvz_A Peptidyl-glycine alpha- 26.1 3.1E+02 0.011 23.5 18.8 164 94-278 154-322 (329)
246 1jof_A Carboxy-CIS,CIS-muconat 26.0 3.3E+02 0.011 23.7 16.4 74 256-337 264-347 (365)
247 2oaj_A Protein SNI1; WD40 repe 25.8 5.4E+02 0.018 26.1 22.8 34 303-336 214-247 (902)
248 1mda_H Methylamine dehydrogena 25.8 2.9E+02 0.0098 24.7 8.8 107 207-336 222-351 (368)
249 2ymu_A WD-40 repeat protein; u 25.6 4E+02 0.014 24.6 24.4 97 221-337 407-504 (577)
250 3gre_A Serine/threonine-protei 25.4 3.6E+02 0.012 23.9 17.2 32 303-335 332-363 (437)
251 3iuj_A Prolyl endopeptidase; h 24.9 4.9E+02 0.017 25.3 14.1 103 221-339 259-367 (693)
252 1n7d_A LDL receptor, low-densi 24.6 93 0.0032 30.9 5.7 114 206-337 463-577 (699)
253 2jp2_A Spred-2, sprouty-relate 24.0 1.3E+02 0.0044 22.5 5.0 41 104-152 20-65 (126)
254 3dr2_A Exported gluconolactona 24.0 3.2E+02 0.011 23.0 12.3 32 205-241 247-278 (305)
255 2xzm_R RACK1; ribosome, transl 23.6 3.5E+02 0.012 23.2 16.8 30 303-332 312-341 (343)
256 3dw8_B Serine/threonine-protei 23.2 3.9E+02 0.013 23.6 18.4 107 220-331 197-315 (447)
257 2pbi_B Guanine nucleotide-bind 22.6 3.8E+02 0.013 23.2 12.2 102 221-335 86-189 (354)
258 3odt_A Protein DOA1; ubiquitin 22.5 3.3E+02 0.011 22.4 22.3 96 220-336 204-301 (313)
259 2oit_A Nucleoporin 214KDA; NH2 22.2 3.6E+02 0.012 24.4 9.0 68 258-337 162-229 (434)
260 1k32_A Tricorn protease; prote 21.8 6.7E+02 0.023 25.8 19.7 98 221-337 358-467 (1045)
261 2dk7_A Transcription elongatio 20.9 84 0.0029 20.9 2.9 23 313-335 21-43 (73)
262 3sov_A LRP-6, low-density lipo 20.7 4.1E+02 0.014 22.9 20.1 112 206-337 89-203 (318)
263 2oaj_A Protein SNI1; WD40 repe 20.7 6.7E+02 0.023 25.4 15.0 72 253-337 64-135 (902)
264 1xod_A Spred1; sprouty, EVH1, 20.2 1.1E+02 0.0039 22.4 4.0 41 104-152 11-56 (118)
265 1z68_A Fibroblast activation p 20.2 5.9E+02 0.02 24.5 19.9 202 105-335 225-447 (719)
266 3c5m_A Oligogalacturonate lyas 20.1 2.2E+02 0.0074 24.8 6.8 33 306-338 86-118 (396)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.46 E-value=4.3e-11 Score=109.42 Aligned_cols=196 Identities=12% Similarity=0.047 Sum_probs=128.0
Q ss_pred eEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCc
Q 036391 105 ELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPR 184 (389)
Q Consensus 105 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~ 184 (389)
.++++||.|++|..+|+++. ... ...++.+ + =+++.++.....+.......+++|+..+++|+.++.+|
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~------~-~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p- 136 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPS--PRC-LFGLGEA------L-NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLP- 136 (315)
T ss_dssp EEEEEETTTTEEEECCCBSS--CEE-SCEEEEE------T-TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCS-
T ss_pred ceEEecCCCCeEEECCCCCc--chh-ceeEEEE------C-CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCC-
Confidence 48899999999999998775 211 1112111 1 14555544322112234567899999999999998777
Q ss_pred ccccccccccccccccCceeeECCeEEEEccC---CCCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeCCeE
Q 036391 185 FLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK---SSTRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLEGCL 260 (389)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~---~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~L 260 (389)
..+....++.++|.+|.+++. ......+.+||+.+++|+.+ ++|.... ....+..+|+|
T Consensus 137 -----------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~i 199 (315)
T 4asc_A 137 -----------YVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARS------LFGATVHDGRI 199 (315)
T ss_dssp -----------SCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETTEE
T ss_pred -----------CcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchh------ceEEEEECCEE
Confidence 223556678899999999875 12235799999999999998 4554432 23567789999
Q ss_pred EEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC--------------cEE
Q 036391 261 CVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR--------------EKL 324 (389)
Q Consensus 261 ~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~--------------~~l 324 (389)
+++...... .-++|+++- .+..|+.+..++... .....+.. ++.++++.... ..+
T Consensus 200 yv~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~l~v~GG~~~~~~~~~~~~~~~~~~v 270 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSI--TDNKWAPFEAFPQER------SSLSLVSL-VGTLYAIGGFATLETESGELVPTELNDI 270 (315)
T ss_dssp EEEEEECSSSEEEEEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEEeccCCCCccceEEEEEC--CCCeEEECCCCCCcc------cceeEEEE-CCEEEEECCccccCcCCccccccccCcE
Confidence 999875432 346888875 246899875433221 11222333 44444444221 248
Q ss_pred EEEeCCCCcEEEE
Q 036391 325 VWFDLETNSLRTV 337 (389)
Q Consensus 325 ~~yd~~~~~~~~v 337 (389)
..||+++++|+.+
T Consensus 271 ~~yd~~~~~W~~~ 283 (315)
T 4asc_A 271 WRYNEEEKKWEGV 283 (315)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEecCCCChhhhh
Confidence 8999999999998
No 2
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.41 E-value=2.4e-10 Score=104.61 Aligned_cols=194 Identities=12% Similarity=0.081 Sum_probs=126.6
Q ss_pred EEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCcc
Q 036391 106 LALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPRF 185 (389)
Q Consensus 106 ~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~ 185 (389)
++++||.|++|..+|+++. ... ...++.+ + =+++.++.... ........+++|++.+++|+.++.+|.
T Consensus 80 ~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~------~-~~iyv~GG~~~-~~~~~~~~~~~yd~~~~~W~~~~~~p~- 147 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPS--ARC-LFGLGEV------D-DKIYVVAGKDL-QTEASLDSVLCYDPVAAKWSEVKNLPI- 147 (318)
T ss_dssp EEEEETTTTEEEECSCBSS--CBC-SCEEEEE------T-TEEEEEEEEBT-TTCCEEEEEEEEETTTTEEEEECCCSS-
T ss_pred EEEEeCCCCcEEECCCCCc--ccc-ccceEEE------C-CEEEEEcCccC-CCCcccceEEEEeCCCCCEeECCCCCC-
Confidence 8899999999999998875 221 1122211 1 24555554331 112345679999999999999987772
Q ss_pred cccccccccccccccCceeeECCeEEEEccC---CCCCcEEEEEECCCceeeeeC-CCCccccCCCceEEEEEEeCCeEE
Q 036391 186 LRDFYDYLYHSLFRKGYGVLAGGALHWVSPK---SSTRSVIMAFNLVAKEFYQLP-LPDSVNVSYANVHVDVGSLEGCLC 261 (389)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~---~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~l~~~~G~L~ 261 (389)
.+....++.++|.+|.+++. ......+..||+.+++|+.++ +|.... ...++..+|+|+
T Consensus 148 -----------~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~iy 210 (318)
T 2woz_A 148 -----------KVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRS------MFGVAIHKGKIV 210 (318)
T ss_dssp -----------CEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCB------SCEEEEETTEEE
T ss_pred -----------cccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcc------cceEEEECCEEE
Confidence 23456678899999999864 112356999999999999984 454332 234677899999
Q ss_pred EEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc--------------CcEEE
Q 036391 262 VFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR--------------REKLV 325 (389)
Q Consensus 262 ~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~--------------~~~l~ 325 (389)
++...... .-++|+++- .+..|+.+..++... ....++.. ++.++++... ...++
T Consensus 211 v~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~ 281 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDL--KTNKWEVMTEFPQER------SSISLVSL-AGSLYAIGGFAMIQLESKEFAPTEVNDIW 281 (318)
T ss_dssp EEEEEETTEEEEEEEEEET--TTCCEEECCCCSSCC------BSCEEEEE-TTEEEEECCBCCBC----CCBCCBCCCEE
T ss_pred EEcCcCCCCccceEEEEEC--CCCeEEECCCCCCcc------cceEEEEE-CCEEEEECCeeccCCCCceeccceeeeEE
Confidence 99875432 346788774 246898875433221 12222333 4444444321 13589
Q ss_pred EEeCCCCcEEEE
Q 036391 326 WFDLETNSLRTV 337 (389)
Q Consensus 326 ~yd~~~~~~~~v 337 (389)
.||+++++|+.+
T Consensus 282 ~yd~~~~~W~~~ 293 (318)
T 2woz_A 282 KYEDDKKEWAGM 293 (318)
T ss_dssp EEETTTTEEEEE
T ss_pred EEeCCCCEehhh
Confidence 999999999998
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.39 E-value=3.3e-10 Score=103.00 Aligned_cols=210 Identities=9% Similarity=0.041 Sum_probs=133.5
Q ss_pred EeeecceEEEee-----CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCcee
Q 036391 90 LGSCNGLIALCN-----SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEV 164 (389)
Q Consensus 90 ~~s~~GLl~l~~-----~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~ 164 (389)
....+|.|.+.. ....+.++||.|++|..+|+++. ... ...++.+ + =+++.+..... ......
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~--~-----~~iyv~GG~~~--~~~~~~ 118 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT--PRD-SLAACAA--E-----GKIYTSGGSEV--GNSALY 118 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS--CCB-SCEEEEE--T-----TEEEEECCBBT--TBSCCC
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc--ccc-ceeEEEE--C-----CEEEEECCCCC--CCcEee
Confidence 334566555443 23578999999999999998875 221 2222222 1 24554443221 122445
Q ss_pred EEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccC--CCC----CcEEEEEECCCceeeeeC-
Q 036391 165 EVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK--SST----RSVIMAFNLVAKEFYQLP- 237 (389)
Q Consensus 165 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~--~~~----~~~il~fD~~~e~~~~i~- 237 (389)
.+++|++.+++|+.++.+| ..+....++.++|.+|.+++. ... ...+.+||+.+++|+.++
T Consensus 119 ~~~~~d~~~~~W~~~~~~p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 186 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPSML------------TQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCP 186 (306)
T ss_dssp CEEEEETTTTEEEEECCCS------------SCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECC
T ss_pred eEEEEeCCCCceEeCCCCc------------CCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCC
Confidence 7899999999999998777 223456678899999999865 111 457999999999999984
Q ss_pred CCCccccCCCceEEEEEEeCCeEEEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEE
Q 036391 238 LPDSVNVSYANVHVDVGSLEGCLCVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKL 315 (389)
Q Consensus 238 ~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i 315 (389)
+|.... ...++..+|+|+++...... .-++|+++- ....|..+..++... .....++. ++.++
T Consensus 187 ~p~~r~------~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~ 251 (306)
T 3ii7_A 187 MIEARK------NHGLVFVKDKIFAVGGQNGLGGLDNVEYYDI--KLNEWKMVSPMPWKG------VTVKCAAV-GSIVY 251 (306)
T ss_dssp CSSCCB------SCEEEEETTEEEEECCEETTEEBCCEEEEET--TTTEEEECCCCSCCB------SCCEEEEE-TTEEE
T ss_pred ccchhh------cceEEEECCEEEEEeCCCCCCCCceEEEeeC--CCCcEEECCCCCCCc------cceeEEEE-CCEEE
Confidence 454332 23567779999999764322 235777774 246798875333211 11222333 44444
Q ss_pred EEEEc-----CcEEEEEeCCCCcEEEEE
Q 036391 316 LLEVR-----REKLVWFDLETNSLRTVK 338 (389)
Q Consensus 316 ~l~~~-----~~~l~~yd~~~~~~~~v~ 338 (389)
++... ...+..||+++++|+.+.
T Consensus 252 v~GG~~~~~~~~~~~~yd~~~~~W~~~~ 279 (306)
T 3ii7_A 252 VLAGFQGVGRLGHILEYNTETDKWVANS 279 (306)
T ss_dssp EEECBCSSSBCCEEEEEETTTTEEEEEE
T ss_pred EEeCcCCCeeeeeEEEEcCCCCeEEeCC
Confidence 44431 246999999999999983
No 4
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.35 E-value=1.8e-10 Score=104.55 Aligned_cols=207 Identities=14% Similarity=0.153 Sum_probs=132.7
Q ss_pred eeecceEEEee------CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCcee
Q 036391 91 GSCNGLIALCN------SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEV 164 (389)
Q Consensus 91 ~s~~GLl~l~~------~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~ 164 (389)
...+|.|.+.. ....+.++||.|++|..+|+++. ... ...++.+ + + +++.+..... .....
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~--~----~-~iyv~GG~~~---~~~~~ 124 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD--RRS-TLGAAVL--N----G-LLYAVGGFDG---STGLS 124 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS--CCB-SCEEEEE--T----T-EEEEEEEECS---SCEEE
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc--ccc-ceEEEEE--C----C-EEEEEcCCCC---CccCc
Confidence 34466555443 12468999999999999998875 221 1222221 1 1 4555554322 12456
Q ss_pred EEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCC----CcEEEEEECCCceeeee-CCC
Q 036391 165 EVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSST----RSVIMAFNLVAKEFYQL-PLP 239 (389)
Q Consensus 165 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~----~~~il~fD~~~e~~~~i-~~P 239 (389)
.+++|++.+++|+.++.+| ..+....++.++|.+|.+++.... ...+..||+.+++|+.+ ++|
T Consensus 125 ~~~~~d~~~~~W~~~~~~p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p 192 (302)
T 2xn4_A 125 SVEAYNIKSNEWFHVAPMN------------TRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMS 192 (302)
T ss_dssp EEEEEETTTTEEEEECCCS------------SCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCS
T ss_pred eEEEEeCCCCeEeecCCCC------------CcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCc
Confidence 7999999999999998777 223455678899999999865111 35699999999999998 455
Q ss_pred CccccCCCceEEEEEEeCCeEEEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEE
Q 036391 240 DSVNVSYANVHVDVGSLEGCLCVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLL 317 (389)
Q Consensus 240 ~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l 317 (389)
.... ...++..+|+|+++...... .-++|+++- ....|+.+..++... .....+.. ++.++++
T Consensus 193 ~~r~------~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~~~~r------~~~~~~~~-~~~i~v~ 257 (302)
T 2xn4_A 193 TRRS------GAGVGVLNNLLYAVGGHDGPLVRKSVEVYDP--TTNAWRQVADMNMCR------RNAGVCAV-NGLLYVV 257 (302)
T ss_dssp SCCB------SCEEEEETTEEEEECCBSSSSBCCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEE
T ss_pred cccc------cccEEEECCEEEEECCCCCCcccceEEEEeC--CCCCEeeCCCCCCcc------ccCeEEEE-CCEEEEE
Confidence 4332 23567889999999865432 235777775 246899875433221 11222333 4444444
Q ss_pred EEcC-----cEEEEEeCCCCcEEEE
Q 036391 318 EVRR-----EKLVWFDLETNSLRTV 337 (389)
Q Consensus 318 ~~~~-----~~l~~yd~~~~~~~~v 337 (389)
.... ..+..||+++++|+.+
T Consensus 258 GG~~~~~~~~~v~~yd~~~~~W~~~ 282 (302)
T 2xn4_A 258 GGDDGSCNLASVEYYNPTTDKWTVV 282 (302)
T ss_dssp CCBCSSSBCCCEEEEETTTTEEEEC
T ss_pred CCcCCCcccccEEEEcCCCCeEEEC
Confidence 3211 2499999999999988
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.34 E-value=2.7e-10 Score=103.26 Aligned_cols=207 Identities=12% Similarity=0.119 Sum_probs=131.7
Q ss_pred eeecceEEEeeC------CceEEEEcCCccc---ccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCC
Q 036391 91 GSCNGLIALCNS------VQELALFNPSTRK---LKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGED 161 (389)
Q Consensus 91 ~s~~GLl~l~~~------~~~~~V~NP~T~~---~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~ 161 (389)
...+|.|.+... ...++++||.|++ |..+|+++. ... ...++.+ + =+++.+.... ...
T Consensus 59 ~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~--~r~-~~~~~~~--~-----~~lyv~GG~~---~~~ 125 (301)
T 2vpj_A 59 VSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNV--RRG-LAGATTL--G-----DMIYVSGGFD---GSR 125 (301)
T ss_dssp EEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSS--CCB-SCEEEEE--T-----TEEEEECCBC---SSC
T ss_pred EEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCC--Ccc-ceeEEEE--C-----CEEEEEcccC---CCc
Confidence 344565544331 2469999999999 999998875 221 1222221 1 2455554322 112
Q ss_pred ceeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCC--CCcEEEEEECCCceeeee-CC
Q 036391 162 VEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIMAFNLVAKEFYQL-PL 238 (389)
Q Consensus 162 ~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~il~fD~~~e~~~~i-~~ 238 (389)
....+++|++.+++|+.++.+| ..+....++.++|.+|.+++... ....+.+||+.+++|+.+ ++
T Consensus 126 ~~~~~~~~d~~~~~W~~~~~~p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 193 (301)
T 2vpj_A 126 RHTSMERYDPNIDQWSMLGDMQ------------TAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPM 193 (301)
T ss_dssp BCCEEEEEETTTTEEEEEEECS------------SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCC
T ss_pred ccceEEEEcCCCCeEEECCCCC------------CCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCC
Confidence 3457999999999999998776 22345667889999999986521 235799999999999998 44
Q ss_pred CCccccCCCceEEEEEEeCCeEEEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEE
Q 036391 239 PDSVNVSYANVHVDVGSLEGCLCVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLL 316 (389)
Q Consensus 239 P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~ 316 (389)
|.... ...++..+|+|+++...... .-++|+++- .+..|..+..++... .....++. ++.+++
T Consensus 194 p~~r~------~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v 258 (301)
T 2vpj_A 194 ATKRS------GAGVALLNDHIYVVGGFDGTAHLSSVEAYNI--RTDSWTTVTSMTTPR------CYVGATVL-RGRLYA 258 (301)
T ss_dssp SSCCB------SCEEEEETTEEEEECCBCSSSBCCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEE
T ss_pred Ccccc------cceEEEECCEEEEEeCCCCCcccceEEEEeC--CCCcEEECCCCCCcc------cceeEEEE-CCEEEE
Confidence 54332 23567789999999865322 345777764 246898875433221 11222333 444444
Q ss_pred EEEcC-----cEEEEEeCCCCcEEEE
Q 036391 317 LEVRR-----EKLVWFDLETNSLRTV 337 (389)
Q Consensus 317 l~~~~-----~~l~~yd~~~~~~~~v 337 (389)
+...+ ..+..||+++++|+.+
T Consensus 259 ~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 259 IAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp ECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred EcCcCCCcccccEEEEcCCCCeEEEc
Confidence 43221 3589999999999988
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.33 E-value=1.5e-10 Score=105.40 Aligned_cols=195 Identities=13% Similarity=0.073 Sum_probs=126.0
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
..+.++||.|++|..+|+++. ... ...++.+ + =+++.+..... ......+++|+..+++|+.+..+|
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~--~-----~~iyv~GG~~~---~~~~~~~~~yd~~~~~W~~~~~~p 156 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSV--PRN-RIGVGVI--D-----GHIYAVGGSHG---CIHHNSVERYEPERDEWHLVAPML 156 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS--CCB-TCEEEEE--T-----TEEEEECCEET---TEECCCEEEEETTTTEEEECCCCS
T ss_pred ceEEEECCCCCeEeECCCCCc--Ccc-ccEEEEE--C-----CEEEEEcCCCC---CcccccEEEECCCCCeEeECCCCC
Confidence 368999999999999998875 221 2222221 1 14555543222 123456899999999999998777
Q ss_pred cccccccccccccccccCceeeECCeEEEEccCCC--CCcEEEEEECCCceeeeeC-CCCccccCCCceEEEEEEeCCeE
Q 036391 184 RFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIMAFNLVAKEFYQLP-LPDSVNVSYANVHVDVGSLEGCL 260 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~l~~~~G~L 260 (389)
..+....++.++|.+|.+++... ....+..||+.+++|..++ +|.... ...++..+|+|
T Consensus 157 ------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~i 218 (308)
T 1zgk_A 157 ------------TRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRS------GAGVCVLHNCI 218 (308)
T ss_dssp ------------SCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETTEE
T ss_pred ------------ccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccc------cceEEEECCEE
Confidence 22345567888999999986521 1357999999999999984 444332 23467779999
Q ss_pred EEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-----CcEEEEEeCCCCc
Q 036391 261 CVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-----REKLVWFDLETNS 333 (389)
Q Consensus 261 ~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-----~~~l~~yd~~~~~ 333 (389)
+++...... .-++|+++- ....|+++..++... ...-.++. ++.++++... ...+..||+++++
T Consensus 219 yv~GG~~~~~~~~~v~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDV--ETETWTFVAPMKHRR------SALGITVH-QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEECCBCSSSBCCCEEEEET--TTTEEEECCCCSSCC------BSCEEEEE-TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEeCCCCCCccceEEEEeC--CCCcEEECCCCCCCc------cceEEEEE-CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 999865322 346777774 246898875333211 11222232 4444444321 2369999999999
Q ss_pred EEEEE
Q 036391 334 LRTVK 338 (389)
Q Consensus 334 ~~~v~ 338 (389)
|+.+.
T Consensus 290 W~~~~ 294 (308)
T 1zgk_A 290 WSEVT 294 (308)
T ss_dssp EEEEE
T ss_pred EeecC
Confidence 99983
No 7
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.23 E-value=3.2e-09 Score=96.91 Aligned_cols=198 Identities=13% Similarity=0.069 Sum_probs=123.8
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeC---CCCCCceeEEEEEEcCCCcEEEcc
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKG---NDGEDVEVEVEVYSLKINSWRRIS 180 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~---~~~~~~~~~~~Vyss~~~~W~~~~ 180 (389)
..+.++||.|++|.. ++++. +.++....+ .. ..+ +++.+..... .........+++|+..+++|+.++
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~--p~~r~~~~~--~~--~~~--~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSS--QVPKNHVSL--VT--KEN--QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCC--CSCSSEEEE--EC--TTC--CEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEec-CCCCC--CCCccceEE--EE--ECC--EEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 578999999999986 44332 112222221 11 122 3444444211 111123345899999999999998
Q ss_pred cCCcccccccccccccccccCceeeECCeEEEEccC-----CCCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEE
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK-----SSTRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVG 254 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~-----~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~ 254 (389)
.+| ..+.....+.++|.+|.+++. ......+..||+.+++|+.+ ++|.... ....+
T Consensus 84 ~~p------------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~ 145 (315)
T 4asc_A 84 PLP------------SPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVY------GHTVL 145 (315)
T ss_dssp CBS------------SCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCB------SCEEE
T ss_pred CCC------------cchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCccc------ceeEE
Confidence 777 223456678899999999873 12235799999999999998 4555432 23567
Q ss_pred EeCCeEEEEEec-CCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC-----cEEEE
Q 036391 255 SLEGCLCVFCFY-NLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-----EKLVW 326 (389)
Q Consensus 255 ~~~G~L~~~~~~-~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~-----~~l~~ 326 (389)
..+|+|+++... ... .-++|+++- .+..|+++..++.. +.....++. ++.++++.... ..+..
T Consensus 146 ~~~~~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~------r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~ 216 (315)
T 4asc_A 146 SHMDLVYVIGGKGSDRKCLNKMCVYDP--KKFEWKELAPMQTA------RSLFGATVH-DGRIIVAAGVTDTGLTSSAEV 216 (315)
T ss_dssp EETTEEEEECCBCTTSCBCCCEEEEET--TTTEEEECCCCSSC------CBSCEEEEE-TTEEEEEEEECSSSEEEEEEE
T ss_pred EECCEEEEEeCCCCCCcccceEEEEeC--CCCeEEECCCCCCc------hhceEEEEE-CCEEEEEeccCCCCccceEEE
Confidence 789999999875 221 346788875 24689887543321 111222333 45555554321 25999
Q ss_pred EeCCCCcEEEE
Q 036391 327 FDLETNSLRTV 337 (389)
Q Consensus 327 yd~~~~~~~~v 337 (389)
||+++++|+.+
T Consensus 217 yd~~~~~W~~~ 227 (315)
T 4asc_A 217 YSITDNKWAPF 227 (315)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCeEEEC
Confidence 99999999998
No 8
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.22 E-value=1.2e-09 Score=99.27 Aligned_cols=194 Identities=12% Similarity=0.079 Sum_probs=125.3
Q ss_pred CceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccC
Q 036391 103 VQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNL 182 (389)
Q Consensus 103 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~ 182 (389)
...+.++||.+++|..+++++. ... ...++.+ + + +++.+.... ......+++|+..+++|+.+..+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~--~----~-~lyv~GG~~----~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFE--KRR-DAACVFW--D----N-VVYILGGSQ----LFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSC--CCB-SCEEEEE--T----T-EEEEECCBS----SSBCCEEEEEETTTTEEEEEECC
T ss_pred CceEEEecCCCCCEecCCCCCc--ccc-eeEEEEE--C----C-EEEEEeCCC----CCCcceEEEEeCCCCeEEECCCC
Confidence 4578999999999999998875 221 2222221 1 1 344443321 23456889999999999999877
Q ss_pred CcccccccccccccccccCceeeECCeEEEEccCC---CCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeCC
Q 036391 183 PRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLEG 258 (389)
Q Consensus 183 p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G 258 (389)
| ..+....++.++|.+|.+++.. .....+..||+.+++|+.+ ++|.... ....+..+|
T Consensus 89 p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~~ 150 (306)
T 3ii7_A 89 P------------TPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRC------SHGMVEANG 150 (306)
T ss_dssp S------------SCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCB------SCEEEEETT
T ss_pred C------------ccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcc------eeEEEEECC
Confidence 7 2234566788999999998652 2235799999999999998 4554432 234677899
Q ss_pred eEEEEEecCCC------eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-c----CcEEEEE
Q 036391 259 CLCVFCFYNLV------YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-R----REKLVWF 327 (389)
Q Consensus 259 ~L~~~~~~~~~------~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~----~~~l~~y 327 (389)
+|+++...... .-++|+++- ....|+.+..++... ...-.++. ++.++++.. . ...+..|
T Consensus 151 ~iyv~GG~~~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~y 221 (306)
T 3ii7_A 151 LIYVCGGSLGNNVSGRVLNSCEVYDP--ATETWTELCPMIEAR------KNHGLVFV-KDKIFAVGGQNGLGGLDNVEYY 221 (306)
T ss_dssp EEEEECCEESCTTTCEECCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEECCEETTEEBCCEEEE
T ss_pred EEEEECCCCCCCCcccccceEEEeCC--CCCeEEECCCccchh------hcceEEEE-CCEEEEEeCCCCCCCCceEEEe
Confidence 99999864221 345777775 246898875333211 12222333 444444431 1 1358999
Q ss_pred eCCCCcEEEE
Q 036391 328 DLETNSLRTV 337 (389)
Q Consensus 328 d~~~~~~~~v 337 (389)
|+++++|+.+
T Consensus 222 d~~~~~W~~~ 231 (306)
T 3ii7_A 222 DIKLNEWKMV 231 (306)
T ss_dssp ETTTTEEEEC
T ss_pred eCCCCcEEEC
Confidence 9999999988
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.22 E-value=1.2e-09 Score=98.89 Aligned_cols=195 Identities=10% Similarity=0.111 Sum_probs=125.3
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc---EEEcc
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS---WRRIS 180 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~---W~~~~ 180 (389)
..++++||.|++|..+|+++. ... ....+. .+ + +++.+.... .......+++|+..+++ |+.+.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~--~~----~-~l~v~GG~~---~~~~~~~~~~~d~~~~~~~~W~~~~ 97 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITR--KRR-YVASVS--LH----D-RIYVIGGYD---GRSRLSSVECLDYTADEDGVWYSVA 97 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSS--CCB-SCEEEE--ET----T-EEEEECCBC---SSCBCCCEEEEETTCCTTCCCEEEC
T ss_pred eEEEEEcCCCCeEEeCCCCCh--hhc-cccEEE--EC----C-EEEEEcCCC---CCccCceEEEEECCCCCCCeeEECC
Confidence 468999999999999998764 211 112221 11 1 455444322 12244578999999999 99998
Q ss_pred cCCcccccccccccccccccCceeeECCeEEEEccCCC--CCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeC
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLE 257 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~ 257 (389)
.+| ..+.....+.++|.+|.+++... ....+..||+.+++|..+ ++|.... ....+..+
T Consensus 98 ~~p------------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~ 159 (301)
T 2vpj_A 98 PMN------------VRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTARE------GAGLVVAS 159 (301)
T ss_dssp CCS------------SCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCB------SCEEEEET
T ss_pred CCC------------CCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcc------cceEEEEC
Confidence 777 23355667889999999986521 235799999999999998 4554432 23466779
Q ss_pred CeEEEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-----CcEEEEEeCC
Q 036391 258 GCLCVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-----REKLVWFDLE 330 (389)
Q Consensus 258 G~L~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-----~~~l~~yd~~ 330 (389)
|+|+++...... .-++|+++- ....|+.+..++... .....+.. ++.++++... ...+..||++
T Consensus 160 ~~iyv~GG~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 160 GVIYCLGGYDGLNILNSVEKYDP--HTGHWTNVTPMATKR------SGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred CEEEEECCCCCCcccceEEEEeC--CCCcEEeCCCCCccc------ccceEEEE-CCEEEEEeCCCCCcccceEEEEeCC
Confidence 999999865322 345777774 246898874333211 11222222 4444444322 2359999999
Q ss_pred CCcEEEEE
Q 036391 331 TNSLRTVK 338 (389)
Q Consensus 331 ~~~~~~v~ 338 (389)
+++|+.+.
T Consensus 231 ~~~W~~~~ 238 (301)
T 2vpj_A 231 TDSWTTVT 238 (301)
T ss_dssp TTEEEEEC
T ss_pred CCcEEECC
Confidence 99999883
No 10
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.22 E-value=8.3e-10 Score=100.14 Aligned_cols=195 Identities=16% Similarity=0.205 Sum_probs=124.5
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
..+.++||.+++|..++++|. ... ....+.+ + =+++.+.... .......+++|+..+++|+.+..+|
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~------~-~~lyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~p 96 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPS--RRC-RAGMVYM------A-GLVFAVGGFN---GSLRVRTVDSYDPVKDQWTSVANMR 96 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSS--CCB-SCEEEEE------T-TEEEEESCBC---SSSBCCCEEEEETTTTEEEEECCCS
T ss_pred CcEEEEcCcCCcEeEcccCCc--ccc-cceEEEE------C-CEEEEEeCcC---CCccccceEEECCCCCceeeCCCCC
Confidence 468899999999999988765 221 1122211 1 2344443221 1123456899999999999998777
Q ss_pred cccccccccccccccccCceeeECCeEEEEccCCC--CCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeCCeE
Q 036391 184 RFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLEGCL 260 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~L 260 (389)
..+.....+.++|.+|.+++... ....+..||+.+++|..+ ++|.... ....+..+|+|
T Consensus 97 ------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~------~~~~~~~~~~i 158 (302)
T 2xn4_A 97 ------------DRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRS------SVGVGVVGGLL 158 (302)
T ss_dssp ------------SCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCB------SCEEEEETTEE
T ss_pred ------------ccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCccc------CceEEEECCEE
Confidence 22345667889999999987522 124689999999999998 4454332 23567789999
Q ss_pred EEEEecCCC----eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-----CcEEEEEeCCC
Q 036391 261 CVFCFYNLV----YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-----REKLVWFDLET 331 (389)
Q Consensus 261 ~~~~~~~~~----~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-----~~~l~~yd~~~ 331 (389)
+++...... .-++|+++- ....|+.+..++... .....++. ++.++++... ...+..||+++
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNA--TTNEWTYIAEMSTRR------SGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp EEECCEETTTTEECCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred EEEeCCCCCCCccccEEEEEeC--CCCcEEECCCCcccc------ccccEEEE-CCEEEEECCCCCCcccceEEEEeCCC
Confidence 999764221 235777774 246899885433211 11222333 4444444321 13599999999
Q ss_pred CcEEEEE
Q 036391 332 NSLRTVK 338 (389)
Q Consensus 332 ~~~~~v~ 338 (389)
++|+.+.
T Consensus 230 ~~W~~~~ 236 (302)
T 2xn4_A 230 NAWRQVA 236 (302)
T ss_dssp TEEEEEC
T ss_pred CCEeeCC
Confidence 9999983
No 11
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.17 E-value=7.9e-10 Score=100.66 Aligned_cols=197 Identities=13% Similarity=0.066 Sum_probs=123.6
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeC-CCCCCceeEEEEEEcCCCcEEEcccC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKG-NDGEDVEVEVEVYSLKINSWRRISNL 182 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~-~~~~~~~~~~~Vyss~~~~W~~~~~~ 182 (389)
..+.++||.|++|..++++|. ... ....+.+ + =+++.+..... .........+++|+..+++|+.+..+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~--~r~-~~~~~~~--~-----~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 108 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQV--PRS-GLAGCVV--G-----GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPM 108 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSS--CCB-SCEEEEE--T-----TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCC
T ss_pred ceEEEEcCCCCeEeECCCCCc--ccc-cceEEEE--C-----CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCC
Confidence 468999999999999988775 221 1112111 1 13444432210 01111234688999999999999877
Q ss_pred CcccccccccccccccccCceeeECCeEEEEccCCC--CCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeCCe
Q 036391 183 PRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS--TRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLEGC 259 (389)
Q Consensus 183 p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~--~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~ 259 (389)
| ..+.....+.++|.+|.+++... ....+..||+.+++|..+ ++|.... ....+..+|+
T Consensus 109 p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~~~~~ 170 (308)
T 1zgk_A 109 S------------VPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI------GVGVAVLNRL 170 (308)
T ss_dssp S------------SCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB------SCEEEEETTE
T ss_pred C------------cCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc------ceEEEEECCE
Confidence 7 23345667889999999976411 124699999999999998 4554432 2245677999
Q ss_pred EEEEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-----CcEEEEEeCCCC
Q 036391 260 LCVFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-----REKLVWFDLETN 332 (389)
Q Consensus 260 L~~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-----~~~l~~yd~~~~ 332 (389)
|+++...... .-++|+++- ....|+.+..++... .....++. ++.++++... ...+..||++++
T Consensus 171 iyv~GG~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 171 LYAVGGFDGTNRLNSAECYYP--ERNEWRMITAMNTIR------SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EEEECCBCSSCBCCCEEEEET--TTTEEEECCCCSSCC------BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEeCCCCCCcCceEEEEeC--CCCeEeeCCCCCCcc------ccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 9999865322 335777764 246898775333211 11222333 4444444321 135999999999
Q ss_pred cEEEE
Q 036391 333 SLRTV 337 (389)
Q Consensus 333 ~~~~v 337 (389)
+|+.+
T Consensus 242 ~W~~~ 246 (308)
T 1zgk_A 242 TWTFV 246 (308)
T ss_dssp EEEEC
T ss_pred cEEEC
Confidence 99988
No 12
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.11 E-value=3.6e-11 Score=78.69 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=38.9
Q ss_pred CCCCcHHHHHHHHhcCCccchhhhcccchhhhhhhCCHHHHH
Q 036391 2 SKKIPLDIIADIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIK 43 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP~ksl~r~r~VcK~W~~li~s~~F~~ 43 (389)
+..||+|++.+||++||++++.++++|||+|+.++.++.|.+
T Consensus 9 ~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred HHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 678999999999999999999999999999999999988643
No 13
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=99.09 E-value=4.8e-11 Score=106.03 Aligned_cols=48 Identities=17% Similarity=0.292 Sum_probs=45.9
Q ss_pred CCCCcHHHHHHHHhcCCccchh-hhcccchhhhhhhCCHHHHHHHHhcc
Q 036391 2 SKKIPLDIIADIFCRQPVKSLL-RFRCVSKTCCSLIDSQDFIKLHLNHS 49 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP~ksl~-r~r~VcK~W~~li~s~~F~~~~~~~~ 49 (389)
++.||+||+.+||++||+++|+ ||++|||+|+++++++.|.+.|+.+.
T Consensus 51 ~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 51 LAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp TTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred hhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 6799999999999999999999 99999999999999999999998776
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.08 E-value=4.2e-09 Score=97.83 Aligned_cols=218 Identities=11% Similarity=-0.004 Sum_probs=126.0
Q ss_pred eeecceEEEee--CCceEEEEcCC--cccccccCCCC-CCCCCCCceeEEEEeeecCCCCeeEEEEEEEeC--CCCCCce
Q 036391 91 GSCNGLIALCN--SVQELALFNPS--TRKLKTLPLPP-CFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKG--NDGEDVE 163 (389)
Q Consensus 91 ~s~~GLl~l~~--~~~~~~V~NP~--T~~~~~LP~~~-~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~--~~~~~~~ 163 (389)
+..+|.|.+.. ....++++||. +++|..+|+++ . .. ....++.+ + + +|+.++.... .......
T Consensus 16 ~~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~--~R-~~~~~~~~--~---~--~lyv~GG~~~~~~~~~~~~ 85 (357)
T 2uvk_A 16 AIDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGG--PR-DQATSAFI--D---G--NLYVFGGIGKNSEGLTQVF 85 (357)
T ss_dssp EEETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTC--CC-BSCEEEEE--T---T--EEEEECCEEECTTSCEEEC
T ss_pred EEECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCC--cC-ccceEEEE--C---C--EEEEEcCCCCCCCccceee
Confidence 34467665543 24578999998 49999999876 3 11 12222222 1 1 4555543311 1111234
Q ss_pred eEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCC-------------------------
Q 036391 164 VEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSS------------------------- 218 (389)
Q Consensus 164 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~------------------------- 218 (389)
..+++|+..+++|+.+..+++ ..+....++.++|.||.+++...
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p-----------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAP-----------MGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINA 154 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCS-----------SCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCC-----------cccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhh
Confidence 568999999999999986551 12234456779999999987521
Q ss_pred -----------CCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEeCCeEEEEEecCC---CeEEEEEEeeCCCCC
Q 036391 219 -----------TRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFCFYNL---VYVDMWMMKEHAVKE 283 (389)
Q Consensus 219 -----------~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~---~~l~iW~l~~~~~~~ 283 (389)
....+.+||+.+++|+.+ ++|.... ....++..+|+|+++..... ..-++|.++-.....
T Consensus 155 ~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~-----~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~ 229 (357)
T 2uvk_A 155 HYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGT-----AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNL 229 (357)
T ss_dssp HHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCC-----BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---C
T ss_pred hhccccccccCCcccEEEEeCCCCcEEECCCCCCCCc-----ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCC
Confidence 125899999999999998 4554322 11356778999999975421 133567765211246
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----------------------cEEEEEeCCCCcEEEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----------------------EKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----------------------~~l~~yd~~~~~~~~v~~ 339 (389)
.|+.+..++... .......+.. ++.++++.... ..+..||+++++|+.+.-
T Consensus 230 ~W~~~~~~~~~~----~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~ 302 (357)
T 2uvk_A 230 KWNKLAPVSSPD----GVAGGFAGIS-NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE 302 (357)
T ss_dssp EEEECCCSSTTT----CCBSCEEEEE-TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE
T ss_pred cEEecCCCCCCc----ccccceEEEE-CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC
Confidence 798875442211 1111112332 44444443210 247899999999999843
No 15
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.04 E-value=2.2e-08 Score=91.41 Aligned_cols=198 Identities=14% Similarity=0.140 Sum_probs=120.3
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeC-CCC--CCceeEEEEEEcCCCcEEEcc
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKG-NDG--EDVEVEVEVYSLKINSWRRIS 180 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~-~~~--~~~~~~~~Vyss~~~~W~~~~ 180 (389)
....++||.|++|...|.+. ..++....+ .. .+=+|+.++.... .+. ......+++|+..+++|+.++
T Consensus 24 ~~~~~yd~~~~~W~~~~~~~---~~~r~~~~~--~~----~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 24 TAAVAYDPMENECYLTALAE---QIPRNHSSI--VT----QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp SEEEEEETTTTEEEEEEECT---TSCSSEEEE--EC----SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred cceEEECCCCCceecccCCc---cCCccceEE--EE----ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 34789999999998844321 112222221 11 1123444443110 000 112234889999999999998
Q ss_pred cCCcccccccccccccccccCceeeECCeEEEEccCC----CCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEE
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS----STRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGS 255 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~----~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~ 255 (389)
.+| ..+.....+.++|.+|.+++.. .....+.+||+.+++|+.+ ++|.... ....+.
T Consensus 95 ~~p------------~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~------~~~~~~ 156 (318)
T 2woz_A 95 PLP------------SARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVY------GHNVIS 156 (318)
T ss_dssp CBS------------SCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEE------SCEEEE
T ss_pred CCC------------ccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccc------ccEEEE
Confidence 777 2234566788999999998752 1125699999999999998 5555432 224566
Q ss_pred eCCeEEEEEecCC---CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-C----cEEEEE
Q 036391 256 LEGCLCVFCFYNL---VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R----EKLVWF 327 (389)
Q Consensus 256 ~~G~L~~~~~~~~---~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~----~~l~~y 327 (389)
.+|+|+++..... ..-++|+++- .+..|+.+..++... .....++. ++.++++... . ..+..|
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r------~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~y 227 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNP--KKGDWKDLAPMKTPR------SMFGVAIH-KGKIVIAGGVTEDGLSASVEAF 227 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEET--TTTEEEEECCCSSCC------BSCEEEEE-TTEEEEEEEEETTEEEEEEEEE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcC--CCCEEEECCCCCCCc------ccceEEEE-CCEEEEEcCcCCCCccceEEEE
Confidence 8999999986421 1335788775 246899875333211 11222333 4545445421 1 358899
Q ss_pred eCCCCcEEEE
Q 036391 328 DLETNSLRTV 337 (389)
Q Consensus 328 d~~~~~~~~v 337 (389)
|+++++|+.+
T Consensus 228 d~~~~~W~~~ 237 (318)
T 2woz_A 228 DLKTNKWEVM 237 (318)
T ss_dssp ETTTCCEEEC
T ss_pred ECCCCeEEEC
Confidence 9999999998
No 16
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.97 E-value=1.2e-06 Score=83.46 Aligned_cols=275 Identities=12% Similarity=0.067 Sum_probs=136.7
Q ss_pred CCCCCcHHHHHHHHhcCCccchhhhcccchhhhhhhCCHHHHHHHHhcccCCCCCeEEEEEe--CceEEecC--------
Q 036391 1 MSKKIPLDIIADIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSITTRSNRRLILKA--AYFLTLTL-------- 70 (389)
Q Consensus 1 ~~~~LP~Dll~~IL~rLP~ksl~r~r~VcK~W~~li~s~~F~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~-------- 70 (389)
+++.||+|++.+||+.|++++|.++.+|||+|+.++.++.+.+..........+...-.... ......+.
T Consensus 18 ~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wk~~~~~~~ 97 (445)
T 2ovr_B 18 FISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEEGIDEPLHIKRRKVIKPGFIHSPWKSAYIRQH 97 (445)
T ss_dssp TTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTTTCCSCCCCCC--CCSSCCCCCHHHHHHHHHH
T ss_pred hhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeecccccccccccceecCCCccCCcHHHHHhhhh
Confidence 36789999999999999999999999999999999999988876664332111100000000 00000000
Q ss_pred -C-CCccccCC-C---CCC-CCC-cEEEeeecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecC
Q 036391 71 -G-IGVQPHHH-P---LNI-GSG-TEVLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKS 142 (389)
Q Consensus 71 -~-~~~~~~~~-p---~~~-~~~-~~~~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~ 142 (389)
. .+|..-.. + +.. ... ...+...+.+++....++.+.|||..+++...--... ......+.+++
T Consensus 98 ~~~~~w~~~~~~~~~~l~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~~- 169 (445)
T 2ovr_B 98 RIDTNWRRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGH-------TGGVWSSQMRD- 169 (445)
T ss_dssp HHHHHHHHSCCCCCEEEECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCC-------SSCEEEEEEET-
T ss_pred hhhhcccCCCcceeEEecccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCC-------CCCEEEEEecC-
Confidence 0 00000000 0 000 111 2234445566666667788999999988755322111 11223344442
Q ss_pred CCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcE
Q 036391 143 NDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSV 222 (389)
Q Consensus 143 ~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~ 222 (389)
+ .+.... ....+.+|+..++.-... .. .+. ..-.++..+|.....++ ....
T Consensus 170 --~--~l~s~~--------~dg~i~vwd~~~~~~~~~--~~----------~h~--~~v~~~~~~~~~l~s~s---~dg~ 220 (445)
T 2ovr_B 170 --N--IIISGS--------TDRTLKVWNAETGECIHT--LY----------GHT--STVRCMHLHEKRVVSGS---RDAT 220 (445)
T ss_dssp --T--EEEEEE--------TTSCEEEEETTTTEEEEE--EC----------CCS--SCEEEEEEETTEEEEEE---TTSE
T ss_pred --C--EEEEEe--------CCCeEEEEECCcCcEEEE--EC----------CCC--CcEEEEEecCCEEEEEe---CCCE
Confidence 2 222221 233678888887743211 11 000 11123334454433333 2357
Q ss_pred EEEEECCCceeee-eCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcc
Q 036391 223 IMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFL 301 (389)
Q Consensus 223 il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~ 301 (389)
|..+|+.+.+... +..... .+.-...+|...+++..+ ..+.+|-+... ..+..+....
T Consensus 221 i~~wd~~~~~~~~~~~~~~~--------~v~~~~~~~~~l~~~~~d-g~i~iwd~~~~------~~~~~~~~~~------ 279 (445)
T 2ovr_B 221 LRVWDIETGQCLHVLMGHVA--------AVRCVQYDGRRVVSGAYD-FMVKVWDPETE------TCLHTLQGHT------ 279 (445)
T ss_dssp EEEEESSSCCEEEEEECCSS--------CEEEEEECSSCEEEEETT-SCEEEEEGGGT------EEEEEECCCS------
T ss_pred EEEEECCCCcEEEEEcCCcc--------cEEEEEECCCEEEEEcCC-CEEEEEECCCC------cEeEEecCCC------
Confidence 8889988765432 322111 112223367665555543 37888876541 2233332111
Q ss_pred eeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 302 FLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 302 ~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
....++.-++..++....++.+..||+++++.
T Consensus 280 -~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 280 -NRVYSLQFDGIHVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp -SCEEEEEECSSEEEEEETTSCEEEEETTTCCE
T ss_pred -CceEEEEECCCEEEEEeCCCeEEEEECCCCCE
Confidence 01112222455555555555566666666543
No 17
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=98.92 E-value=1.4e-07 Score=87.37 Aligned_cols=200 Identities=11% Similarity=0.038 Sum_probs=117.9
Q ss_pred ceEEEEcCCcccccccCCCC-CCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCC------------------------
Q 036391 104 QELALFNPSTRKLKTLPLPP-CFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGND------------------------ 158 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~-~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~------------------------ 158 (389)
..+.++||.|++|..+++++ . +.....+.. ++ =+++.+.......
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~----~r~~~~~~~-~~-----~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPM----GMAGHVTFV-HN-----GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAH 155 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSS----CCSSEEEEE-ET-----TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccEEEEeCCCCcEEECCCCCCc----ccccceEEE-EC-----CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhh
Confidence 36899999999999999876 3 222222221 22 1455554321100
Q ss_pred -------CCCceeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCC---CCCcEEEEEEC
Q 036391 159 -------GEDVEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIMAFNL 228 (389)
Q Consensus 159 -------~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~il~fD~ 228 (389)
.......+++|+..+++|+.++.+|.. .......+.++|.||.+++.. .....+..||+
T Consensus 156 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~-----------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 156 YFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWY-----------GTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp HHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSC-----------CCBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred hccccccccCCcccEEEEeCCCCcEEECCCCCCC-----------CcccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 000235899999999999999877721 112256788999999997641 11245777876
Q ss_pred --CCceeeee-CCCCccccCCCceEEEEEEeCCeEEEEEecCC-------------------CeEEEEEEeeCCCCCCeE
Q 036391 229 --VAKEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFCFYNL-------------------VYVDMWMMKEHAVKESWT 286 (389)
Q Consensus 229 --~~e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~-------------------~~l~iW~l~~~~~~~~W~ 286 (389)
.+++|+.+ ++|.... .....++..+|+|+++..... ....+|+++- ....|+
T Consensus 225 d~~~~~W~~~~~~~~~~~----~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~--~~~~W~ 298 (357)
T 2uvk_A 225 TGNNLKWNKLAPVSSPDG----VAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLW--HNGKWD 298 (357)
T ss_dssp C---CEEEECCCSSTTTC----CBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEEC--C---CE
T ss_pred cCCCCcEEecCCCCCCcc----cccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEec--CCCcee
Confidence 89999997 3443321 112357888999999986321 1245667664 246899
Q ss_pred EEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC------cEEEEEeCCCCcEEEE
Q 036391 287 KLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR------EKLVWFDLETNSLRTV 337 (389)
Q Consensus 287 ~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~------~~l~~yd~~~~~~~~v 337 (389)
++..++.... .. .++.-++.++++...+ ..++.+++++++|.+.
T Consensus 299 ~~~~~p~~r~------~~-~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 299 KSGELSQGRA------YG-VSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp EEEECSSCCB------SS-EEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eCCCCCCCcc------cc-eeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 9876553321 11 1222355555565421 2588899999999877
No 18
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.90 E-value=8.3e-08 Score=97.12 Aligned_cols=203 Identities=11% Similarity=0.076 Sum_probs=121.4
Q ss_pred ceEEEEcCCcccccccC-CCCCC-CCCCCc-eeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcc
Q 036391 104 QELALFNPSTRKLKTLP-LPPCF-VGFPSA-FIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRIS 180 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP-~~~~~-~~~~~~-~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 180 (389)
..++++||.|++|..++ +.+.. ...++. ..++.+.. + =+++.++...... .....+++|+..+++|+.++
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~----~-~~lyv~GG~~~~~--~~~~dv~~yd~~t~~W~~~~ 484 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR----N-NQLLLIGGRKAPH--QGLSDNWIFDMKTREWSMIK 484 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT----T-TEEEEECCBSSTT--CBCCCCEEEETTTTEEEECC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc----C-CEEEEEcCCCCCC--CccccEEEEeCCCCcEEECC
Confidence 46899999999999998 52210 011121 22222210 1 2355554322211 13446899999999999998
Q ss_pred cCCcccccccccccccccccCceeeE-CCeEEEEccCCCCCcEEEEEECCCceeeeeC----CCCccccCCCceEEEEEE
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPKSSTRSVIMAFNLVAKEFYQLP----LPDSVNVSYANVHVDVGS 255 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~~~~~~~~~~l~~ 255 (389)
.+| ..+..+.++.+ +|.+|.+++..... .+.+||+.+++|..++ +|.... . ...+.
T Consensus 485 ~~p------------~~R~~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~~~~g~~p~~r~----~--~~a~v 545 (695)
T 2zwa_A 485 SLS------------HTRFRHSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDVTPKDEFFQNSL----V--SAGLE 545 (695)
T ss_dssp CCS------------BCCBSCEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEECCCSSGGGGSCC----B--SCEEE
T ss_pred CCC------------CCcccceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEccCCCCCCCccc----c--eeEEE
Confidence 877 23345566675 99999998763333 7999999999999986 443332 1 12233
Q ss_pred eC---CeEEEEEecCC----CeEEEEEEeeCCCCCC------eEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc--
Q 036391 256 LE---GCLCVFCFYNL----VYVDMWMMKEHAVKES------WTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-- 320 (389)
Q Consensus 256 ~~---G~L~~~~~~~~----~~l~iW~l~~~~~~~~------W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-- 320 (389)
++ |+|+++++... ..-++|+++-. ... |+.+..++... +.....++..++.++++...
T Consensus 546 ~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~--~~~w~~~~~W~~~~~~p~~~-----R~~~~~~~~~~~~iyv~GG~~~ 618 (695)
T 2zwa_A 546 FDPVSKQGIILGGGFMDQTTVSDKAIIFKYD--AENATEPITVIKKLQHPLFQ-----RYGSQIKYITPRKLLIVGGTSP 618 (695)
T ss_dssp EETTTTEEEEECCBCTTSSCBCCEEEEEEEC--TTCSSCCEEEEEEEECGGGC-----CBSCEEEEEETTEEEEECCBCS
T ss_pred EeCCCCEEEEECCcCCCCCeeeCcEEEEEcc--CCccccceEEEEcCCCCCCC-----cccceEEEeCCCEEEEECCccC
Confidence 34 89999986521 13457776642 234 88877643111 11223344433544444421
Q ss_pred ------CcEEEEEeCCCCcEEEEEE
Q 036391 321 ------REKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 321 ------~~~l~~yd~~~~~~~~v~~ 339 (389)
...+..||+++++|+.+.+
T Consensus 619 ~~~~~~~~~v~~yd~~t~~W~~~~~ 643 (695)
T 2zwa_A 619 SGLFDRTNSIISLDPLSETLTSIPI 643 (695)
T ss_dssp SCCCCTTTSEEEEETTTTEEEECCC
T ss_pred CCCCCCCCeEEEEECCCCeEEEeec
Confidence 2359999999999996544
No 19
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.89 E-value=1.1e-06 Score=84.04 Aligned_cols=45 Identities=20% Similarity=0.273 Sum_probs=40.1
Q ss_pred CCCCcHHHHHHHHhcCCccchhhhcccchhhhhhhCC-HHHHHHHH
Q 036391 2 SKKIPLDIIADIFCRQPVKSLLRFRCVSKTCCSLIDS-QDFIKLHL 46 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP~ksl~r~r~VcK~W~~li~s-~~F~~~~~ 46 (389)
+..||+|++.+||+.||+++|+++..|||+|+.++.+ +...+.+.
T Consensus 15 ~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~ 60 (464)
T 3v7d_B 15 ITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLL 60 (464)
T ss_dssp HHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHH
T ss_pred hHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4579999999999999999999999999999999998 77666554
No 20
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.75 E-value=1.3e-06 Score=83.05 Aligned_cols=277 Identities=12% Similarity=0.084 Sum_probs=139.0
Q ss_pred CCCCcHH----HHHHHHhcCCccchhhhcccchhhhhhhCCHHHHHHHHhcccCC----------CCCe-EEEEEe----
Q 036391 2 SKKIPLD----IIADIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSITT----------RSNR-RLILKA---- 62 (389)
Q Consensus 2 ~~~LP~D----ll~~IL~rLP~ksl~r~r~VcK~W~~li~s~~F~~~~~~~~~~~----------~~~~-~l~~~~---- 62 (389)
++.||+| |+..||+.|++++|.++.+|||+|+.++.++.+.+....+.... .... .++...
T Consensus 11 ~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 90 (435)
T 1p22_A 11 ITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWRGLAERRGWGQYLFKNKPPDG 90 (435)
T ss_dssp HHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHSSSGGGGCC-------
T ss_pred HHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCcchhhhhhhhccchhhhhhccCCCCC
Confidence 3569999 99999999999999999999999999999887666544322100 0000 000000
Q ss_pred ----Cc----eEE-----ec-CCCCccccCC---CC----CCCCCcEEEeeecceEEEeeCCceEEEEcCCcccccccCC
Q 036391 63 ----AY----FLT-----LT-LGIGVQPHHH---PL----NIGSGTEVLGSCNGLIALCNSVQELALFNPSTRKLKTLPL 121 (389)
Q Consensus 63 ----~~----~~~-----~~-~~~~~~~~~~---p~----~~~~~~~~~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~ 121 (389)
.. ++. .. ...+|..-.. .+ ........+...+.+++....++.+.|||..|++....-.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~ 170 (435)
T 1p22_A 91 NAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT 170 (435)
T ss_dssp --CCSHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEECCCSSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEEC
T ss_pred CCCchhhHHhhhhhhhcchhHHHhhhccCCccceEEecccCCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEc
Confidence 00 000 00 0000100000 00 0012233344444455555567789999998877654322
Q ss_pred CCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCcccccccccccccccccC
Q 036391 122 PPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKG 201 (389)
Q Consensus 122 ~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~ 201 (389)
.. ......+.++ ++ .+.... ....+.+|+..++.-... .. .+. ..-
T Consensus 171 ~h-------~~~v~~l~~~---~~--~l~sg~--------~dg~i~vwd~~~~~~~~~--~~----------~h~--~~v 216 (435)
T 1p22_A 171 GH-------TGSVLCLQYD---ER--VIITGS--------SDSTVRVWDVNTGEMLNT--LI----------HHC--EAV 216 (435)
T ss_dssp CC-------SSCEEEEECC---SS--EEEEEE--------TTSCEEEEESSSCCEEEE--EC----------CCC--SCE
T ss_pred CC-------CCcEEEEEEC---CC--EEEEEc--------CCCeEEEEECCCCcEEEE--Ec----------CCC--CcE
Confidence 21 1122334443 22 222222 233678888887753221 11 000 111
Q ss_pred ceeeECCeEEEEccCCCCCcEEEEEECCCceeeee--CCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeC
Q 036391 202 YGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQL--PLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEH 279 (389)
Q Consensus 202 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i--~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~ 279 (389)
.++.+++.....++. ...|..+|+.+..-... .+.... . .+.-...+|...+++.. +..+.+|-+...
T Consensus 217 ~~l~~~~~~l~s~s~---dg~i~vwd~~~~~~~~~~~~~~~~~----~--~v~~~~~~~~~l~s~~~-dg~i~vwd~~~~ 286 (435)
T 1p22_A 217 LHLRFNNGMMVTCSK---DRSIAVWDMASPTDITLRRVLVGHR----A--AVNVVDFDDKYIVSASG-DRTIKVWNTSTC 286 (435)
T ss_dssp EEEECCTTEEEEEET---TSCEEEEECSSSSCCEEEEEECCCS----S--CEEEEEEETTEEEEEET-TSEEEEEETTTC
T ss_pred EEEEEcCCEEEEeeC---CCcEEEEeCCCCCCceeeeEecCCC----C--cEEEEEeCCCEEEEEeC-CCeEEEEECCcC
Confidence 223334443333322 35688899876543211 111111 1 12223336666555544 448999987642
Q ss_pred CCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 280 AVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 280 ~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
..+..+.... ....++..+++.++....++.+..||+++++..
T Consensus 287 ------~~~~~~~~~~-------~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 287 ------EFVRTLNGHK-------RGIACLQYRDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp ------CEEEEEECCS-------SCEEEEEEETTEEEEEETTSCEEEEETTTCCEE
T ss_pred ------cEEEEEcCCC-------CcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEE
Confidence 2344443221 112233335677777777778999999987643
No 21
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.48 E-value=1.5e-06 Score=87.40 Aligned_cols=106 Identities=11% Similarity=0.047 Sum_probs=71.5
Q ss_pred eEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCc
Q 036391 105 ELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPR 184 (389)
Q Consensus 105 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~ 184 (389)
.+.++||.|++|..++.++. .........++.. +=+++.+... . ...+++|+..+++|..+..++
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~--~~~~~~~~~~~~~-----~g~lyv~GG~---~----~~~v~~yd~~t~~W~~~~~~~- 284 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVT--KHDMFCPGISMDG-----NGQIVVTGGN---D----AKKTSLYDSSSDSWIPGPDMQ- 284 (656)
T ss_dssp EEEEECTTTCCBCCCEEEEC--SCCCSSCEEEECT-----TSCEEEECSS---S----TTCEEEEEGGGTEEEECCCCS-
T ss_pred EEEEEeCCCCcEEeCcccCC--CCCCccccccCCC-----CCCEEEeCCC---C----CCceEEecCcCCceeECCCCC-
Confidence 58899999999999987754 2221222222211 1245544321 1 126899999999999998777
Q ss_pred ccccccccccccccccCceeeE-CCeEEEEccC-C--CCCcEEEEEECCCceeeee
Q 036391 185 FLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPK-S--STRSVIMAFNLVAKEFYQL 236 (389)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~-~--~~~~~il~fD~~~e~~~~i 236 (389)
..+....++.+ +|++|.+++. . .....+..||+.+++|..+
T Consensus 285 -----------~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 285 -----------VARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp -----------SCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEE
T ss_pred -----------ccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeC
Confidence 23344556777 9999999873 1 1235699999999999987
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=98.28 E-value=1.2e-05 Score=81.19 Aligned_cols=159 Identities=10% Similarity=0.035 Sum_probs=100.0
Q ss_pred ceeEEEEEEcCCCcEEEcc-cCCcccccccccccccccccCceeeE--CCeEEEEccCCC---CCcEEEEEECCCceeee
Q 036391 162 VEVEVEVYSLKINSWRRIS-NLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSS---TRSVIMAFNLVAKEFYQ 235 (389)
Q Consensus 162 ~~~~~~Vyss~~~~W~~~~-~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~---~~~~il~fD~~~e~~~~ 235 (389)
....+++|+..+++|+.+. .+|... ....+..+..+.+ +|.+|.+++... ....+..||+.+++|+.
T Consensus 410 ~~~~v~~yd~~~~~W~~~~~~~p~~~-------~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~ 482 (695)
T 2zwa_A 410 RVNEILQLSIHYDKIDMKNIEVSSSE-------VPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM 482 (695)
T ss_dssp BCCCEEEEEECSSCEEEEECCCCCSC-------CCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEE
T ss_pred CcCcEEEEECCCCeEEEeccCCCCCC-------CCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEE
Confidence 3456889999999999987 422000 0123455677888 999999987622 12569999999999999
Q ss_pred e-CCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeee-EEEEeCC
Q 036391 236 L-PLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRP-LGYSRNG 312 (389)
Q Consensus 236 i-~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p-~~~~~~g 312 (389)
+ ++|.... ....+.+ +|+|+++++..... ++|+++- ....|+.+..... .. ..+.... +.+..+.
T Consensus 483 ~~~~p~~R~------~h~~~~~~~~~iyv~GG~~~~~-~v~~yd~--~t~~W~~~~~~g~--~p-~~r~~~~a~v~~~~~ 550 (695)
T 2zwa_A 483 IKSLSHTRF------RHSACSLPDGNVLILGGVTEGP-AMLLYNV--TEEIFKDVTPKDE--FF-QNSLVSAGLEFDPVS 550 (695)
T ss_dssp CCCCSBCCB------SCEEEECTTSCEEEECCBCSSC-SEEEEET--TTTEEEECCCSSG--GG-GSCCBSCEEEEETTT
T ss_pred CCCCCCCcc------cceEEEEcCCEEEEECCCCCCC-CEEEEEC--CCCceEEccCCCC--CC-CcccceeEEEEeCCC
Confidence 8 4554332 2245664 99999998765444 7888875 2468987754110 00 0111122 2333232
Q ss_pred CEEEEE-Ec-------CcEEEEEeCCCCc------EEEEEE
Q 036391 313 VKLLLE-VR-------REKLVWFDLETNS------LRTVKI 339 (389)
Q Consensus 313 ~~i~l~-~~-------~~~l~~yd~~~~~------~~~v~~ 339 (389)
+.|++. .. ...+..||+++++ |+.+.-
T Consensus 551 ~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 551 KQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp TEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 444443 22 1369999999999 787743
No 23
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.03 E-value=5.3e-05 Score=76.12 Aligned_cols=200 Identities=5% Similarity=-0.049 Sum_probs=110.0
Q ss_pred EEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCC---CCCceeEEEEEEcCCCcEEEcccCC
Q 036391 107 ALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGND---GEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 107 ~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~---~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
...||.+++|..++++|. . ...+ .+.+. +=||+.+....... .......+++|+..+++|+.+..+|
T Consensus 169 ~~~dp~~~~W~~~~~~P~--~----~~~~--av~~~--~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~ 238 (656)
T 1k3i_A 169 TAPQPGLGRWGPTIDLPI--V----PAAA--AIEPT--SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV 238 (656)
T ss_dssp CCCCTTSCEEEEEEECSS--C----CSEE--EEETT--TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE
T ss_pred ccCCCCCCeeeeeccCCC--C----ceeE--EEEec--CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC
Confidence 345889999998877763 1 1111 12221 23555555432211 0113347899999999999887655
Q ss_pred cccccccccccccccccCc-eeeECCeEEEEccCCCCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEe-CCeE
Q 036391 184 RFLRDFYDYLYHSLFRKGY-GVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSL-EGCL 260 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~-~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~-~G~L 260 (389)
. ........ .+..+|.+|.+++.. ...+..||+.+++|..+ ++|.... ....+.+ +|+|
T Consensus 239 ~----------~~~~~~~~~~~~~~g~lyv~GG~~--~~~v~~yd~~t~~W~~~~~~~~~R~------~~s~~~~~dg~i 300 (656)
T 1k3i_A 239 T----------KHDMFCPGISMDGNGQIVVTGGND--AKKTSLYDSSSDSWIPGPDMQVARG------YQSSATMSDGRV 300 (656)
T ss_dssp C----------SCCCSSCEEEECTTSCEEEECSSS--TTCEEEEEGGGTEEEECCCCSSCCS------SCEEEECTTSCE
T ss_pred C----------CCCCccccccCCCCCCEEEeCCCC--CCceEEecCcCCceeECCCCCcccc------ccceEEecCCeE
Confidence 1 11111112 234689999998752 23799999999999998 4444321 2356777 9999
Q ss_pred EEEEec-CC--CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC-c-----ceeeeEEEEe-CCCEEEEEEcCcEEEEEeCC
Q 036391 261 CVFCFY-NL--VYVDMWMMKEHAVKESWTKLISVQEPTPTRS-F-----LFLRPLGYSR-NGVKLLLEVRREKLVWFDLE 330 (389)
Q Consensus 261 ~~~~~~-~~--~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~-~-----~~~~p~~~~~-~g~~i~l~~~~~~l~~yd~~ 330 (389)
+++... .. ..-.+|+.+- ....|+.+.......+... . .......+.. +|. ++.......+..||++
T Consensus 301 yv~GG~~~~~~~~~~~e~yd~--~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~-~~~~~~~~~v~~yd~~ 377 (656)
T 1k3i_A 301 FTIGGSWSGGVFEKNGEVYSP--SSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGS-VFQAGPSTAMNWYYTS 377 (656)
T ss_dssp EEECCCCCSSSCCCCEEEEET--TTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGC-EEECCSSSEEEEEECS
T ss_pred EEEeCcccCCcccccceEeCC--CCCcceeCCCccccccccccccceeecCCceEEEECCCCc-EEEecCccceeeeecC
Confidence 999873 21 1123444443 2367987621110000000 0 0011112221 332 3322234568999999
Q ss_pred CCcEEEE
Q 036391 331 TNSLRTV 337 (389)
Q Consensus 331 ~~~~~~v 337 (389)
++.|...
T Consensus 378 ~~~w~~~ 384 (656)
T 1k3i_A 378 GSGDVKS 384 (656)
T ss_dssp TTCEEEE
T ss_pred Ccceeec
Confidence 9998654
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.00 E-value=2.2e-06 Score=75.33 Aligned_cols=49 Identities=10% Similarity=0.169 Sum_probs=45.4
Q ss_pred CCCCcHHHHHHHHhcCCccchhhhcccchhhhhhhCCHHHHHHHHhccc
Q 036391 2 SKKIPLDIIADIFCRQPVKSLLRFRCVSKTCCSLIDSQDFIKLHLNHSI 50 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP~ksl~r~r~VcK~W~~li~s~~F~~~~~~~~~ 50 (389)
++.||+|++..||+.|++++|+++.+|||+||.+.+++...+.++.+..
T Consensus 5 l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~ 53 (312)
T 3l2o_B 5 LTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDL 53 (312)
T ss_dssp HHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSG
T ss_pred hHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccC
Confidence 4689999999999999999999999999999999999999988887753
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.50 E-value=3.5e-05 Score=70.42 Aligned_cols=39 Identities=21% Similarity=0.312 Sum_probs=36.6
Q ss_pred CCCCcHHHHHHHHhcCCccchhhhcccchhhhhhhCCHH
Q 036391 2 SKKIPLDIIADIFCRQPVKSLLRFRCVSKTCCSLIDSQD 40 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP~ksl~r~r~VcK~W~~li~s~~ 40 (389)
|++||+|++.+||.+||.+++.+++.|||+|+.++.+|.
T Consensus 9 ~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 9 WDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp SSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred hhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 689999999999999999999999999999999987665
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.09 E-value=0.00015 Score=71.55 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=29.5
Q ss_pred CCCCCcHHHHHHHHhcCC-ccchhhhcccchhhhhh
Q 036391 1 MSKKIPLDIIADIFCRQP-VKSLLRFRCVSKTCCSL 35 (389)
Q Consensus 1 ~~~~LP~Dll~~IL~rLP-~ksl~r~r~VcK~W~~l 35 (389)
+|+.||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 5 ~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 5 IALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp -----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred chhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 478999999999999999 99999999999999988
No 27
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.48 E-value=0.00087 Score=66.12 Aligned_cols=33 Identities=12% Similarity=0.029 Sum_probs=31.5
Q ss_pred CCCcHHHHHHHHhcC-Cccchhhhcccchhhhhh
Q 036391 3 KKIPLDIIADIFCRQ-PVKSLLRFRCVSKTCCSL 35 (389)
Q Consensus 3 ~~LP~Dll~~IL~rL-P~ksl~r~r~VcK~W~~l 35 (389)
..||+|++.+||.+| |.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 479999999999999 899999999999999987
No 28
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.33 E-value=0.28 Score=44.24 Aligned_cols=68 Identities=10% Similarity=0.153 Sum_probs=44.4
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeC---CCEEEEEEcCcEEEEEeCCCC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRN---GVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~---g~~i~l~~~~~~l~~yd~~~~ 332 (389)
+|.+.+++..+ ..+.+|-+... ...|.....+.... ....-++++++ +..++....++.+.+||++++
T Consensus 171 ~~~~l~~~~~d-g~i~i~d~~~~--~~~~~~~~~~~~h~-----~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 171 ESRKFVTGGAD-NLVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp TTCEEEEEETT-SCEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCEEEEEeCC-CeEEEEEecCC--CcceeeEEEEeccc-----CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 46666665543 48999999852 34576666665322 12445677777 666666666677899998876
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.91 E-value=0.95 Score=41.03 Aligned_cols=195 Identities=10% Similarity=0.072 Sum_probs=103.2
Q ss_pred eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc
Q 036391 96 LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS 175 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~ 175 (389)
+++....+..+.|||..+++....-.... ......++.+.+..+.+ +.... ....+.+++..++.
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~--l~s~~--------~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 88 TVAVGSKGGDIILWDYDVQNKTSFIQGMG-----PGDAITGMKFNQFNTNQ--LFVSS--------IRGATTLRDFSGSV 152 (383)
T ss_dssp EEEEEEBTSCEEEEETTSTTCEEEECCCS-----TTCBEEEEEEETTEEEE--EEEEE--------TTTEEEEEETTSCE
T ss_pred EEEEEcCCCeEEEEeCCCcccceeeecCC-----cCCceeEEEeCCCCCCE--EEEEe--------CCCEEEEEECCCCc
Confidence 44444456678999998887665443211 12234456666532222 22221 23467888888766
Q ss_pred EEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE
Q 036391 176 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS 255 (389)
Q Consensus 176 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~ 255 (389)
.+....... +......-...-+|.....+. ....|..+|+..+....+...... . ..+.-
T Consensus 153 ~~~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~h~~~------v-~~~~~ 212 (383)
T 3ei3_B 153 IQVFAKTDS----------WDYWYCCVDVSVSRQMLATGD---STGRLLLLGLDGHEIFKEKLHKAK------V-THAEF 212 (383)
T ss_dssp EEEEECCCC----------SSCCEEEEEEETTTTEEEEEE---TTSEEEEEETTSCEEEEEECSSSC------E-EEEEE
T ss_pred eEEEeccCC----------CCCCeEEEEECCCCCEEEEEC---CCCCEEEEECCCCEEEEeccCCCc------E-EEEEE
Confidence 655532220 000000011122344333332 235788899866555555432211 1 12333
Q ss_pred e-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEe-CCCEEEEEEcCcEEEEEeCCCC
Q 036391 256 L-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSR-NGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 256 ~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~-~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
. +|. +.+.+.. +..+.||-+....... ..+..+.... ...-+++++ +|..++....++.+.+||+++.
T Consensus 213 ~~~~~~~l~s~~~-d~~i~iwd~~~~~~~~--~~~~~~~~~~------~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~ 283 (383)
T 3ei3_B 213 NPRCDWLMATSSV-DATVKLWDLRNIKDKN--SYIAEMPHEK------PVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDW 283 (383)
T ss_dssp CSSCTTEEEEEET-TSEEEEEEGGGCCSTT--CEEEEEECSS------CEEEEEECTTTSCEEEEEESSSEEEEEETTBT
T ss_pred CCCCCCEEEEEeC-CCEEEEEeCCCCCccc--ceEEEecCCC------ceEEEEEcCCCCCEEEEEcCCCcEEEEECCCC
Confidence 3 555 5554444 4489999998633222 2333333221 245677888 8888887777788999999886
Q ss_pred cE
Q 036391 333 SL 334 (389)
Q Consensus 333 ~~ 334 (389)
+.
T Consensus 284 ~~ 285 (383)
T 3ei3_B 284 SK 285 (383)
T ss_dssp TS
T ss_pred cc
Confidence 54
No 30
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.57 E-value=0.64 Score=39.84 Aligned_cols=113 Identities=12% Similarity=0.126 Sum_probs=76.4
Q ss_pred eECCeEEEEccCCCCCcEEEEEECCCcee-eeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 205 LAGGALHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 205 ~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
+.+|.+|.-++ ......|..+|+.+.+- ..+++|.... ...++..+++|+++..... .+|+.+- .
T Consensus 28 ~~~~~LyestG-~~g~S~v~~vD~~tgkv~~~~~l~~~~f------geGi~~~~~~ly~ltw~~~---~v~v~D~----~ 93 (243)
T 3mbr_X 28 YLRGHLYESTG-ETGRSSVRKVDLETGRILQRAEVPPPYF------GAGIVAWRDRLIQLTWRNH---EGFVYDL----A 93 (243)
T ss_dssp EETTEEEEEEC-CTTSCEEEEEETTTCCEEEEEECCTTCC------EEEEEEETTEEEEEESSSS---EEEEEET----T
T ss_pred EECCEEEEECC-CCCCceEEEEECCCCCEEEEEeCCCCcc------eeEEEEeCCEEEEEEeeCC---EEEEEEC----C
Confidence 45566666443 23456899999998765 4578876542 3456777999999976543 3556653 2
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE-EEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~-~~v~~ 339 (389)
.-.++.+++... .+.++..+|+.+++...+.++..+|++|.+. +.|.+
T Consensus 94 tl~~~~ti~~~~--------~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 94 TLTPRARFRYPG--------EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp TTEEEEEEECSS--------CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCCC--------CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 345677777642 2456666788888887677899999999665 45555
No 31
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.37 E-value=0.83 Score=46.24 Aligned_cols=194 Identities=12% Similarity=0.113 Sum_probs=97.7
Q ss_pred EEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcE
Q 036391 97 IALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSW 176 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W 176 (389)
++....++.+.|||..++....+..... +.....++.+.+..+.-.++... ....+.+|+..++.|
T Consensus 24 latg~~dg~I~vwd~~~~~~~~~~~l~~-----h~~~V~~l~~s~~~~~~~l~s~s---------~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 24 LATCSSDKTIKIFEVEGETHKLIDTLTG-----HEGPVWRVDWAHPKFGTILASCS---------YDGKVLIWKEENGRW 89 (753)
T ss_dssp EEEEETTTEEEEEEEETTEEEEEEEECC-----CSSCEEEEEECCTTSCSEEEEEE---------TTSCEEEEEEETTEE
T ss_pred EEEEECCCcEEEEecCCCCCccceeccC-----CcCceEEEEecCCCCCCEEEEEe---------CCCeEEEEECCCCcc
Confidence 3333345667788776433333222211 12234456666543222233222 234688999999988
Q ss_pred EEcccCCcccccccccccccccccCceeeE--C--CeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccccCCCceEE
Q 036391 177 RRISNLPRFLRDFYDYLYHSLFRKGYGVLA--G--GALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVSYANVHV 251 (389)
Q Consensus 177 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~--G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~ 251 (389)
..+..... +. ..-.++.+ + |.+...++. ...|..+|+.+..-. .+.+.... ... .
T Consensus 90 ~~~~~~~~----------h~--~~V~~v~~sp~~~~~~l~sgs~---dg~I~vwdl~~~~~~~~~~~~~~~----~~v-~ 149 (753)
T 3jro_A 90 SQIAVHAV----------HS--ASVNSVQWAPHEYGPLLLVASS---DGKVSVVEFKENGTTSPIIIDAHA----IGV-N 149 (753)
T ss_dssp EEEEEECC----------CS--SCEEEEEECCGGGCSEEEEEET---TSEEEEEECCSSSCCCCEEEECCS----SCE-E
T ss_pred cccccccC----------CC--CCeEEEEECCCCCCCEEEEEeC---CCcEEEEEeecCCCcceeEeecCC----Cce-E
Confidence 76653331 11 01112222 1 444333332 357888888765221 11111110 000 1
Q ss_pred EEEEe--------------CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeC---CCE
Q 036391 252 DVGSL--------------EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRN---GVK 314 (389)
Q Consensus 252 ~l~~~--------------~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~---g~~ 314 (389)
.+.-. +|.+.+++.. +..+.+|-+... ...+.....+.... ....-++++++ |..
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-dg~I~iwd~~~~--~~~~~~~~~~~~h~-----~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGA-DNLVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEET-TSCEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEE
T ss_pred EEEecCcccccccccccCCCCCEEEEEEC-CCeEEEEeccCC--cccceeeeeecCCC-----CcEEEEEeccCCCCCCE
Confidence 12221 3555555554 448999999863 34566666555322 12455677777 666
Q ss_pred EEEEEcCcEEEEEeCCCC
Q 036391 315 LLLEVRREKLVWFDLETN 332 (389)
Q Consensus 315 i~l~~~~~~l~~yd~~~~ 332 (389)
++....++.+.+||+.++
T Consensus 222 l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEEESSSCEEEEEESSS
T ss_pred EEEEecCCEEEEecCCCC
Confidence 666666777999998875
No 32
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.98 E-value=1.2 Score=40.26 Aligned_cols=200 Identities=11% Similarity=-0.026 Sum_probs=95.9
Q ss_pred ecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 93 CNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 93 ~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
.++.++....++.+.|||..+++......... . .+......+.+.+.. .+ +.... ....+.+++..
T Consensus 92 ~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~--~-~H~~~V~~v~~spdg-~~--l~sgs--------~d~~i~iwd~~ 157 (344)
T 4gqb_B 92 GERGILVASDSGAVELWELDENETLIVSKFCK--Y-EHDDIVSTVSVLSSG-TQ--AVSGS--------KDICIKVWDLA 157 (344)
T ss_dssp TTTEEEEEETTSEEEEEEECTTSSCEEEEEEE--E-CCSSCEEEEEECTTS-SE--EEEEE--------TTSCEEEEETT
T ss_pred CCCeEEEEECCCEEEEEeccCCCceeEeeccc--c-CCCCCEEEEEECCCC-CE--EEEEe--------CCCeEEEEECC
Confidence 35666666567789999999987654332211 0 012224455666543 22 22221 23357788887
Q ss_pred CCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEE
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHV 251 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~ 251 (389)
++.=. ..+. .+......-...-+|.-+.++.. ....|..+|+.+.+... +..+.... . ..
T Consensus 158 ~~~~~--~~~~----------~h~~~V~~~~~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~----~-~~ 218 (344)
T 4gqb_B 158 QQVVL--SSYR----------AHAAQVTCVAASPHKDSVFLSCS--EDNRILLWDTRCPKPASQIGCSAPGY----L-PT 218 (344)
T ss_dssp TTEEE--EEEC----------CCSSCEEEEEECSSCTTEEEEEE--TTSCEEEEETTSSSCEEECC----CC----C-EE
T ss_pred CCcEE--EEEc----------CcCCceEEEEecCCCCCceeeec--cccccccccccccceeeeeecceeec----c-ce
Confidence 76321 1111 00000000011122321222221 22468888988765432 33322211 1 11
Q ss_pred EEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEE-EEcCcEEEEEe
Q 036391 252 DVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLL-EVRREKLVWFD 328 (389)
Q Consensus 252 ~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l-~~~~~~l~~yd 328 (389)
.+... ++.+.+.+.. +..+.||-+... ..+..+.... ....-++++++|..++. ...++.+.+||
T Consensus 219 ~~~~~p~~~~~l~sg~~-dg~v~~wd~~~~------~~~~~~~~h~-----~~v~~v~fsp~g~~~lasgs~D~~i~vwd 286 (344)
T 4gqb_B 219 SLAWHPQQSEVFVFGDE-NGTVSLVDTKST------SCVLSSAVHS-----QCVTGLVFSPHSVPFLASLSEDCSLAVLD 286 (344)
T ss_dssp EEEECSSCTTEEEEEET-TSEEEEEESCC--------CCEEEECCS-----SCEEEEEECSSSSCCEEEEETTSCEEEEC
T ss_pred eeeecCCCCcceEEecc-CCcEEEEECCCC------cEEEEEcCCC-----CCEEEEEEccCCCeEEEEEeCCCeEEEEE
Confidence 23322 4555554443 448999977641 1222333211 12455778888765444 45567799999
Q ss_pred CCCCcEEEE
Q 036391 329 LETNSLRTV 337 (389)
Q Consensus 329 ~~~~~~~~v 337 (389)
.++++...+
T Consensus 287 ~~~~~~~~~ 295 (344)
T 4gqb_B 287 SSLSELFRS 295 (344)
T ss_dssp TTCCEEEEE
T ss_pred CCCCcEEEE
Confidence 999876543
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=94.57 E-value=0.81 Score=39.66 Aligned_cols=113 Identities=14% Similarity=0.125 Sum_probs=73.9
Q ss_pred eECCeEEEEccCCCCCcEEEEEECCCcee-eeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 205 LAGGALHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 205 ~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
+.+|.+|--++. .....|..+|+.+.+- ..+++|... |...++..+++|+++..... .+|+.+- +
T Consensus 50 ~~~~~LyestG~-~g~S~v~~vD~~Tgkv~~~~~l~~~~------FgeGit~~g~~ly~ltw~~~---~v~v~D~----~ 115 (262)
T 3nol_A 50 YRNGYFYESTGL-NGRSSIRKVDIESGKTLQQIELGKRY------FGEGISDWKDKIVGLTWKNG---LGFVWNI----R 115 (262)
T ss_dssp EETTEEEEEEEE-TTEEEEEEECTTTCCEEEEEECCTTC------CEEEEEEETTEEEEEESSSS---EEEEEET----T
T ss_pred EECCEEEEECCC-CCCceEEEEECCCCcEEEEEecCCcc------ceeEEEEeCCEEEEEEeeCC---EEEEEEC----c
Confidence 447777765543 3346899999998765 457777543 23457778999999976543 3555553 2
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE-EEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~-~~v~~ 339 (389)
.-..+.+|+... ...++..+|+.++....+.++..+|++|.+. ..|.+
T Consensus 116 t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 116 NLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp TCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred cCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 344666777532 2345556788888776567899999998664 45554
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.51 E-value=2.3 Score=37.26 Aligned_cols=197 Identities=11% Similarity=0.066 Sum_probs=100.8
Q ss_pred eecceEEEeeCCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
+.+|-+++...++.+.|||..+++... +..... .........+.+.+.. .+ +.... ....+.+|+
T Consensus 60 ~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~-~~--l~~~~--------~d~~i~~~d 125 (337)
T 1gxr_A 60 SNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDC---LNRDNYIRSCKLLPDG-CT--LIVGG--------EASTLSIWD 125 (337)
T ss_dssp CSSSSEEEEECBSEEEEEETTSTTCCSCSEEEEC---SCTTSBEEEEEECTTS-SE--EEEEE--------SSSEEEEEE
T ss_pred ecCCcEEEEcCCCeEEEEECCCCCceeeeecccc---cCCCCcEEEEEEcCCC-CE--EEEEc--------CCCcEEEEE
Confidence 345544444347788999988765322 111100 0112234456666632 22 22221 234788999
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCC
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYA 247 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 247 (389)
..++......... .+. ..-..+. -+|.....+.. ...|..+|+.+.+... +.....
T Consensus 126 ~~~~~~~~~~~~~----------~~~--~~i~~~~~~~~~~~l~~~~~---dg~v~~~d~~~~~~~~~~~~~~~------ 184 (337)
T 1gxr_A 126 LAAPTPRIKAELT----------SSA--PACYALAISPDSKVCFSCCS---DGNIAVWDLHNQTLVRQFQGHTD------ 184 (337)
T ss_dssp CCCC--EEEEEEE----------CSS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCCSS------
T ss_pred CCCCCcceeeecc----------cCC--CceEEEEECCCCCEEEEEeC---CCcEEEEeCCCCceeeeeecccC------
Confidence 9888754432211 000 0001111 14544444332 2468889988765433 332211
Q ss_pred ceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEE
Q 036391 248 NVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVW 326 (389)
Q Consensus 248 ~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~ 326 (389)
.. ..+... +|...+++.. +..+.+|-++.. ..+..+.... ...-++++++|..++....++.+..
T Consensus 185 ~i-~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~------~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 185 GA-SCIDISNDGTKLWTGGL-DNTVRSWDLREG------RQLQQHDFTS------QIFSLGYCPTGEWLAVGMESSNVEV 250 (337)
T ss_dssp CE-EEEEECTTSSEEEEEET-TSEEEEEETTTT------EEEEEEECSS------CEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ce-EEEEECCCCCEEEEEec-CCcEEEEECCCC------ceEeeecCCC------ceEEEEECCCCCEEEEEcCCCcEEE
Confidence 11 123333 6665555544 448999987641 2333333221 2345677788888888877778999
Q ss_pred EeCCCCcEEEE
Q 036391 327 FDLETNSLRTV 337 (389)
Q Consensus 327 yd~~~~~~~~v 337 (389)
||+++++...+
T Consensus 251 ~~~~~~~~~~~ 261 (337)
T 1gxr_A 251 LHVNKPDKYQL 261 (337)
T ss_dssp EETTSSCEEEE
T ss_pred EECCCCCeEEE
Confidence 99998876544
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=94.42 E-value=2.6 Score=37.56 Aligned_cols=200 Identities=13% Similarity=0.051 Sum_probs=100.8
Q ss_pred cceEEEeeC-----CceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 94 NGLIALCNS-----VQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 94 ~GLl~l~~~-----~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+|++.+... ...+.++||.|++... ++...- .........++.++. +. ++.... ....+.
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n--~~~lg~~~~~i~~~~---~~-lyv~~~--------~~~~v~ 67 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRAN--GFKLGDVAQSMVIRD---GI-GWIVVN--------NSHVIF 67 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHH--SSCCBSCEEEEEEET---TE-EEEEEG--------GGTEEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhc--CcccCccceEEEEEC---CE-EEEEEc--------CCCEEE
Confidence 455555432 5689999999988754 211000 000011122233332 22 222221 234788
Q ss_pred EEEcCCCcE-EEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccccC
Q 036391 168 VYSLKINSW-RRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVS 245 (389)
Q Consensus 168 Vyss~~~~W-~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~ 245 (389)
|++..+++- +.+.... . ...-.+.-+|.+|..... ...|..+|+.+.+.. .++.+......
T Consensus 68 viD~~t~~~~~~i~~~~------------~--p~~i~~~~~g~lyv~~~~---~~~v~~iD~~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 68 AIDINTFKEVGRITGFT------------S--PRYIHFLSDEKAYVTQIW---DYRIFIINPKTYEITGYIECPDMDMES 130 (328)
T ss_dssp EEETTTCCEEEEEECCS------------S--EEEEEEEETTEEEEEEBS---CSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred EEECcccEEEEEcCCCC------------C--CcEEEEeCCCeEEEEECC---CCeEEEEECCCCeEEEEEEcCCccccC
Confidence 899988765 2332111 0 011112257888876422 368999999987765 46665411000
Q ss_pred CCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----
Q 036391 246 YANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR---- 321 (389)
Q Consensus 246 ~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~---- 321 (389)
.... .++..+|+|++........+.++-++. . ..+..+..... ..-+.+.++|. +++....
T Consensus 131 ~~p~--~i~~~~~~lyv~~~~~~~~v~viD~~t----~--~~~~~i~~g~~------p~~i~~~~dG~-l~v~~~~~~~~ 195 (328)
T 3dsm_A 131 GSTE--QMVQYGKYVYVNCWSYQNRILKIDTET----D--KVVDELTIGIQ------PTSLVMDKYNK-MWTITDGGYEG 195 (328)
T ss_dssp CBCC--CEEEETTEEEEEECTTCCEEEEEETTT----T--EEEEEEECSSC------BCCCEECTTSE-EEEEBCCBCTT
T ss_pred CCcc--eEEEECCEEEEEcCCCCCEEEEEECCC----C--eEEEEEEcCCC------ccceEEcCCCC-EEEEECCCccC
Confidence 0111 233378898888652233454443332 2 22334443221 22355666765 5554332
Q ss_pred -------cEEEEEeCCCCcEE-EEEE
Q 036391 322 -------EKLVWFDLETNSLR-TVKI 339 (389)
Q Consensus 322 -------~~l~~yd~~~~~~~-~v~~ 339 (389)
..++.+|++++++. .+.+
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEEC
T ss_pred CccccCCceEEEEECCCCeEEEEEec
Confidence 47999999998876 3444
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.42 E-value=1.7 Score=40.35 Aligned_cols=197 Identities=13% Similarity=0.104 Sum_probs=97.5
Q ss_pred eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc
Q 036391 96 LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS 175 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~ 175 (389)
+|.....++.+.|||..+++...+-.... +.....++.|.|..+.+ ++.. . ....+.+++.+++.
T Consensus 134 ~lasGs~dg~i~lWd~~~~~~~~~~~~~g-----H~~~V~~l~f~p~~~~~-l~s~----s-----~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 134 TVAVGSKGGDIMLWNFGIKDKPTFIKGIG-----AGGSITGLKFNPLNTNQ-FYAS----S-----MEGTTRLQDFKGNI 198 (435)
T ss_dssp CEEEEETTSCEEEECSSCCSCCEEECCCS-----SSCCCCEEEECSSCTTE-EEEE----C-----SSSCEEEEETTSCE
T ss_pred EEEEEeCCCEEEEEECCCCCceeEEEccC-----CCCCEEEEEEeCCCCCE-EEEE----e-----CCCEEEEeeccCCc
Confidence 55555567789999998887544332211 11223445666654443 2211 1 22357788888776
Q ss_pred EEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE
Q 036391 176 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS 255 (389)
Q Consensus 176 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~ 255 (389)
-+....... .......-...-+|.+...+. ....|..+|+.++....+.... ... ..+.-
T Consensus 199 ~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~g~---~dg~i~~wd~~~~~~~~~~~h~------~~v-~~v~~ 258 (435)
T 4e54_B 199 LRVFASSDT----------INIWFCSLDVSASSRMVVTGD---NVGNVILLNMDGKELWNLRMHK------KKV-THVAL 258 (435)
T ss_dssp EEEEECCSS----------CSCCCCCEEEETTTTEEEEEC---SSSBEEEEESSSCBCCCSBCCS------SCE-EEEEE
T ss_pred eeEEeccCC----------CCccEEEEEECCCCCEEEEEe---CCCcEeeeccCcceeEEEeccc------ceE-Eeeee
Confidence 554432110 000001111122455444333 2346888898765443332211 111 12332
Q ss_pred e-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 256 L-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 256 ~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
. +|.-.++....+..+.||-+.......... ...+......-++++++|..++....++.+.+||+.+...
T Consensus 259 ~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~--------~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 259 NPCCDWFLATASVDQTVKIWDLRQVRGKASFL--------YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp CTTCSSEEEEEETTSBCCEEETTTCCSSSCCS--------BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred cCCCceEEEEecCcceeeEEecccccccceEE--------EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 2 454334443344588999876432111110 0001111233456677888887777777899999988654
Q ss_pred E
Q 036391 335 R 335 (389)
Q Consensus 335 ~ 335 (389)
.
T Consensus 331 ~ 331 (435)
T 4e54_B 331 P 331 (435)
T ss_dssp E
T ss_pred c
Confidence 3
No 37
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.96 E-value=2.6 Score=35.86 Aligned_cols=201 Identities=11% Similarity=0.024 Sum_probs=98.2
Q ss_pred eecceEEEeeCCceEEEEcCCc-ccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 92 SCNGLIALCNSVQELALFNPST-RKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
+.+|-.++......++++|..+ ++...+..... . .....+.+.|.. .+ +.+... .. .....+.+++
T Consensus 50 spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~--~----~~~~~~~~spdg-~~--l~~~~~-~~---~~~~~l~~~~ 116 (297)
T 2ojh_A 50 SPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFA--T----ICNNDHGISPDG-AL--YAISDK-VE---FGKSAIYLLP 116 (297)
T ss_dssp CTTSSEEEEEETTEEEEEESSSCCSCEECCCTTC--C----CBCSCCEECTTS-SE--EEEEEC-TT---TSSCEEEEEE
T ss_pred CCCCCEEEEEcCCeEEEEeCCCCCCceEeccccc--c----ccccceEECCCC-CE--EEEEEe-CC---CCcceEEEEE
Confidence 3455443333466899999999 87776654321 0 011123344432 22 222211 00 1235666777
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceeeECCe-EEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCce
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANV 249 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 249 (389)
..++.-+.+...... .. ....-+|. +++.... .....|..+|..+.....+...... .
T Consensus 117 ~~~~~~~~~~~~~~~--------~~------~~~spdg~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~------~ 175 (297)
T 2ojh_A 117 STGGTPRLMTKNLPS--------YW------HGWSPDGKSFTYCGIR-DQVFDIYSMDIDSGVETRLTHGEGR------N 175 (297)
T ss_dssp TTCCCCEECCSSSSE--------EE------EEECTTSSEEEEEEEE-TTEEEEEEEETTTCCEEECCCSSSC------E
T ss_pred CCCCceEEeecCCCc--------cc------eEECCCCCEEEEEECC-CCceEEEEEECCCCcceEcccCCCc------c
Confidence 766654444322200 00 01112343 3323221 1223566667766655544322111 1
Q ss_pred EEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC-------
Q 036391 250 HVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR------- 321 (389)
Q Consensus 250 ~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~------- 321 (389)
..+.- -+|...++.......+.||.++..+ ... ..+.... .....+.++++|+.|++....
T Consensus 176 -~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~--~~~---~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~~~ 244 (297)
T 2ojh_A 176 -DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG--SSV---ERITDSA-----YGDWFPHPSPSGDKVVFVSYDADVFDHP 244 (297)
T ss_dssp -EEEEECTTSSEEEEEECTTSSCEEEEEETTS--SCE---EECCCCS-----EEEEEEEECTTSSEEEEEEEETTCCSCC
T ss_pred -ccceECCCCCEEEEEecCCCCccEEEECCCC--CCc---EEEecCC-----cccCCeEECCCCCEEEEEEcCCCCCccc
Confidence 12222 3676555544434478999998422 222 2222111 123446777889888776442
Q ss_pred ----cEEEEEeCCCCcEEEE
Q 036391 322 ----EKLVWFDLETNSLRTV 337 (389)
Q Consensus 322 ----~~l~~yd~~~~~~~~v 337 (389)
..++.||+++++.+.+
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEE
T ss_pred ccCceEEEEEecCCCCceee
Confidence 4599999999887766
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.71 E-value=2.8 Score=37.40 Aligned_cols=73 Identities=14% Similarity=0.110 Sum_probs=44.3
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC-CCcEEE
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE-TNSLRT 336 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~-~~~~~~ 336 (389)
|.+.+++.. +..+.||.+.... ..+... ...... ......-++++++|..++....++.+.+||+. .++|+.
T Consensus 221 ~~~l~s~~~-dg~i~iwd~~~~~--~~~~~~-~~~~~~---~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 221 RSYLASVSQ-DRTCIIWTQDNEQ--GPWKKT-LLKEEK---FPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp SEEEEEEET-TSCEEEEEESSTT--SCCEEE-ESSSSC---CSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred CCeEEEEeC-CCEEEEEeCCCCC--ccceee-eecccc---CCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 565555544 4489999998632 223222 112111 11124456778899888877777779999988 456666
Q ss_pred E
Q 036391 337 V 337 (389)
Q Consensus 337 v 337 (389)
+
T Consensus 294 ~ 294 (379)
T 3jrp_A 294 A 294 (379)
T ss_dssp E
T ss_pred c
Confidence 6
No 39
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.56 E-value=2.7 Score=36.48 Aligned_cols=111 Identities=14% Similarity=0.072 Sum_probs=72.3
Q ss_pred CeEEEEccCCCCCcEEEEEECCCcee-eeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeE
Q 036391 208 GALHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWT 286 (389)
Q Consensus 208 G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~ 286 (389)
|.+|..++. .....|..+|+.+.+- ..+++|.... ...++..+++|+++..... . +++.+- ..-.
T Consensus 32 g~Lyvstg~-~~~s~v~~iD~~tg~v~~~i~l~~~~f------geGi~~~g~~lyv~t~~~~-~--v~viD~----~t~~ 97 (266)
T 2iwa_A 32 DTLFESTGL-YGRSSVRQVALQTGKVENIHKMDDSYF------GEGLTLLNEKLYQVVWLKN-I--GFIYDR----RTLS 97 (266)
T ss_dssp TEEEEEECS-TTTCEEEEEETTTCCEEEEEECCTTCC------EEEEEEETTEEEEEETTCS-E--EEEEET----TTTE
T ss_pred CeEEEECCC-CCCCEEEEEECCCCCEEEEEecCCCcc------eEEEEEeCCEEEEEEecCC-E--EEEEEC----CCCc
Confidence 677765432 2346899999997664 4467765432 2345666889998876533 3 556653 2345
Q ss_pred EEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE-EEEEE
Q 036391 287 KLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 287 ~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~-~~v~~ 339 (389)
.+.+|+.. . ....++..+|+.+++...++.+...|+++.+. ..|.+
T Consensus 98 v~~~i~~g--~-----~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 98 NIKNFTHQ--M-----KDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEEECC--S-----SSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEEECC--C-----CCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 67777754 1 12455667888888876667899999999664 55554
No 40
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=93.46 E-value=4.4 Score=36.92 Aligned_cols=190 Identities=8% Similarity=0.042 Sum_probs=97.8
Q ss_pred cceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCC
Q 036391 94 NGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKI 173 (389)
Q Consensus 94 ~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~ 173 (389)
++.++....++.+.|||..+++...+-.... ......+.+.+. +.+ +.+.. ....+.+|+..+
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~------~~~v~~v~~s~~-~~~--l~~~~--------~dg~i~iwd~~~ 165 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETDE------STYVASVKWSHD-GSF--LSVGL--------GNGLVDIYDVES 165 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECCT------TCCEEEEEECTT-SSE--EEEEE--------TTSCEEEEETTT
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecCC------CCCEEEEEECCC-CCE--EEEEC--------CCCeEEEEECcC
Confidence 3444444457789999999988766543321 223445666663 233 32322 223678888877
Q ss_pred CcEEEc-ccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEE
Q 036391 174 NSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVD 252 (389)
Q Consensus 174 ~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 252 (389)
+.-... .... ..-.++..+|.+...+.. ...|..+|+.+..-....+.... ... ..
T Consensus 166 ~~~~~~~~~~~---------------~~v~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~----~~v-~~ 222 (401)
T 4aez_A 166 QTKLRTMAGHQ---------------ARVGCLSWNRHVLSSGSR---SGAIHHHDVRIANHQIGTLQGHS----SEV-CG 222 (401)
T ss_dssp CCEEEEECCCS---------------SCEEEEEEETTEEEEEET---TSEEEEEETTSSSCEEEEEECCS----SCE-EE
T ss_pred CeEEEEecCCC---------------CceEEEEECCCEEEEEcC---CCCEEEEecccCcceeeEEcCCC----CCe-eE
Confidence 643221 1111 111234446654444332 35788999874332221111111 111 12
Q ss_pred EEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE---cCcEEEEEe
Q 036391 253 VGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV---RREKLVWFD 328 (389)
Q Consensus 253 l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~---~~~~l~~yd 328 (389)
+.-. +|.+.+++.. +..+.+|-+... ..+..+.... ....-+++++++..++... .++.+..||
T Consensus 223 ~~~~~~~~~l~s~~~-d~~v~iwd~~~~------~~~~~~~~~~-----~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d 290 (401)
T 4aez_A 223 LAWRSDGLQLASGGN-DNVVQIWDARSS------IPKFTKTNHN-----AAVKAVAWCPWQSNLLATGGGTMDKQIHFWN 290 (401)
T ss_dssp EEECTTSSEEEEEET-TSCEEEEETTCS------SEEEEECCCS-----SCCCEEEECTTSTTEEEEECCTTTCEEEEEE
T ss_pred EEEcCCCCEEEEEeC-CCeEEEccCCCC------CccEEecCCc-----ceEEEEEECCCCCCEEEEecCCCCCEEEEEE
Confidence 3333 6666555554 348999988751 1222332211 1244567777665555543 356799999
Q ss_pred CCCCcEE
Q 036391 329 LETNSLR 335 (389)
Q Consensus 329 ~~~~~~~ 335 (389)
+.+++..
T Consensus 291 ~~~~~~~ 297 (401)
T 4aez_A 291 AATGARV 297 (401)
T ss_dssp TTTCCEE
T ss_pred CCCCCEE
Confidence 9887654
No 41
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.34 E-value=4.9 Score=37.08 Aligned_cols=184 Identities=11% Similarity=0.051 Sum_probs=96.8
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
..++++|..|++...+...+. ....+.+.|... + ++.... . .....+.+++..++..+.+....
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~--------~~~~~~~spdg~-~-la~~~~-~-----~g~~~i~~~d~~~~~~~~l~~~~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPR--------HNGAPAFSPDGS-K-LAFALS-K-----TGSLNLYVMDLASGQIRQVTDGR 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSS--------CEEEEEECTTSS-E-EEEEEC-T-----TSSCEEEEEETTTCCEEECCCCS
T ss_pred cEEEEEECCCCcEEEeecCCC--------cccCEEEcCCCC-E-EEEEEe-c-----CCCceEEEEECCCCCEEeCcCCC
Confidence 479999999998876654321 234455665432 2 222211 1 12346888899888776654322
Q ss_pred cccccccccccccccccCceeeECCe-EEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE-eCCeEE
Q 036391 184 RFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-LEGCLC 261 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~ 261 (389)
.. .......-+|. ++..... .....|..+|+.+.....+...... ...+.- -+|+..
T Consensus 267 ~~-------------~~~~~~spdg~~l~~~s~~-~g~~~i~~~d~~~~~~~~l~~~~~~-------~~~~~~spdG~~l 325 (415)
T 2hqs_A 267 SN-------------NTEPTWFPDSQNLAFTSDQ-AGRPQVYKVNINGGAPQRITWEGSQ-------NQDADVSSDGKFM 325 (415)
T ss_dssp SC-------------EEEEEECTTSSEEEEEECT-TSSCEEEEEETTSSCCEECCCSSSE-------EEEEEECTTSSEE
T ss_pred Cc-------------ccceEECCCCCEEEEEECC-CCCcEEEEEECCCCCEEEEecCCCc-------ccCeEECCCCCEE
Confidence 00 00001112565 4433321 2334788889988765554332111 112222 366654
Q ss_pred EEEecCCC--eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCc---EEEEEeCCCCcEEE
Q 036391 262 VFCFYNLV--YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE---KLVWFDLETNSLRT 336 (389)
Q Consensus 262 ~~~~~~~~--~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~---~l~~yd~~~~~~~~ 336 (389)
++...... .+.+|-++. .... .+.... ....+++++||..|++..... .++.+|++++..+.
T Consensus 326 ~~~~~~~g~~~i~~~d~~~----~~~~---~l~~~~------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~ 392 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLAT----GGVQ---VLSSTF------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKAR 392 (415)
T ss_dssp EEEEECSSCEEEEEEETTT----CCEE---ECCCSS------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEE
T ss_pred EEEECcCCceEEEEEECCC----CCEE---EecCCC------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEE
Confidence 44433322 455554442 2221 122111 234567788999888765433 69999999888877
Q ss_pred E
Q 036391 337 V 337 (389)
Q Consensus 337 v 337 (389)
+
T Consensus 393 l 393 (415)
T 2hqs_A 393 L 393 (415)
T ss_dssp C
T ss_pred e
Confidence 6
No 42
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.24 E-value=4.6 Score=36.41 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=100.5
Q ss_pred eecc-eEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 92 SCNG-LIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 92 s~~G-Ll~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+.+| .+.+.. .+..+.+||+.+++....-... . ...++.+++..+ + ++... . ....+.+|
T Consensus 40 s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~------~--~v~~~~~spdg~-~-l~~~~---~-----~~~~v~v~ 101 (391)
T 1l0q_A 40 SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG------S--SPQGVAVSPDGK-Q-VYVTN---M-----ASSTLSVI 101 (391)
T ss_dssp CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS------S--SEEEEEECTTSS-E-EEEEE---T-----TTTEEEEE
T ss_pred CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC------C--CccceEECCCCC-E-EEEEE---C-----CCCEEEEE
Confidence 3344 343433 4678999999988765532221 1 234566665433 2 22111 1 22468899
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeECCe-EEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCC
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYA 247 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 247 (389)
+..++.-...-... .. ...-...-+|. +|..+. ....|..+|+.+.+... +......
T Consensus 102 d~~~~~~~~~~~~~------------~~-~~~~~~s~dg~~l~~~~~---~~~~v~~~d~~~~~~~~~~~~~~~~----- 160 (391)
T 1l0q_A 102 DTTSNTVAGTVKTG------------KS-PLGLALSPDGKKLYVTNN---GDKTVSVINTVTKAVINTVSVGRSP----- 160 (391)
T ss_dssp ETTTTEEEEEEECS------------SS-EEEEEECTTSSEEEEEET---TTTEEEEEETTTTEEEEEEECCSSE-----
T ss_pred ECCCCeEEEEEeCC------------CC-cceEEECCCCCEEEEEeC---CCCEEEEEECCCCcEEEEEecCCCc-----
Confidence 99887543321111 00 00111222455 433332 23589999998776544 3332111
Q ss_pred ceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE---cCcE
Q 036391 248 NVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV---RREK 323 (389)
Q Consensus 248 ~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~---~~~~ 323 (389)
..+... +|+..++.......+.+|-+.. ...+..+.... ...-+++.++|..++... .++.
T Consensus 161 ---~~~~~~~dg~~l~~~~~~~~~v~~~d~~~------~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 161 ---KGIAVTPDGTKVYVANFDSMSISVIDTVT------NSVIDTVKVEA------APSGIAVNPEGTKAYVTNVDKYFNT 225 (391)
T ss_dssp ---EEEEECTTSSEEEEEETTTTEEEEEETTT------TEEEEEEECSS------EEEEEEECTTSSEEEEEEECSSCCE
T ss_pred ---ceEEECCCCCEEEEEeCCCCEEEEEECCC------CeEEEEEecCC------CccceEECCCCCEEEEEecCcCCCc
Confidence 122222 5654444444445888887653 22333343321 234467778888888776 4567
Q ss_pred EEEEeCCCCcEE
Q 036391 324 LVWFDLETNSLR 335 (389)
Q Consensus 324 l~~yd~~~~~~~ 335 (389)
+.+||+++++..
T Consensus 226 v~~~d~~~~~~~ 237 (391)
T 1l0q_A 226 VSMIDTGTNKIT 237 (391)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCeEE
Confidence 999999987654
No 43
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=92.98 E-value=5 Score=36.14 Aligned_cols=189 Identities=12% Similarity=0.078 Sum_probs=99.8
Q ss_pred eEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC
Q 036391 96 LIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN 174 (389)
Q Consensus 96 Ll~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~ 174 (389)
.|.+.. ....+.++|+.+++....-.... ...++.+++..+ + ++... . ....+.+|+..++
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~dg~-~-l~~~~---~-----~~~~v~~~d~~~~ 148 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGK--------SPLGLALSPDGK-K-LYVTN---N-----GDKTVSVINTVTK 148 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS--------SEEEEEECTTSS-E-EEEEE---T-----TTTEEEEEETTTT
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEeCCC--------CcceEEECCCCC-E-EEEEe---C-----CCCEEEEEECCCC
Confidence 344443 34789999999987655432221 134556665432 2 21111 1 2347888998887
Q ss_pred cEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEEEE
Q 036391 175 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDV 253 (389)
Q Consensus 175 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l 253 (389)
+....-... .. ...-...-+|...+++.. ....|..+|+.+.+... +...... ..+
T Consensus 149 ~~~~~~~~~------------~~-~~~~~~~~dg~~l~~~~~--~~~~v~~~d~~~~~~~~~~~~~~~~--------~~~ 205 (391)
T 1l0q_A 149 AVINTVSVG------------RS-PKGIAVTPDGTKVYVANF--DSMSISVIDTVTNSVIDTVKVEAAP--------SGI 205 (391)
T ss_dssp EEEEEEECC------------SS-EEEEEECTTSSEEEEEET--TTTEEEEEETTTTEEEEEEECSSEE--------EEE
T ss_pred cEEEEEecC------------CC-cceEEECCCCCEEEEEeC--CCCEEEEEECCCCeEEEEEecCCCc--------cce
Confidence 654331111 00 000111224543333322 23578999998876543 3322111 123
Q ss_pred EEe-CCeEEEEEec--CCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeC
Q 036391 254 GSL-EGCLCVFCFY--NLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDL 329 (389)
Q Consensus 254 ~~~-~G~L~~~~~~--~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~ 329 (389)
... +|+..++... ....+.+|-++. ...+..+.... ...-++++++|+.+++.. .++.+..||+
T Consensus 206 ~~~~~g~~l~~~~~~~~~~~v~~~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVDKYFNTVSMIDTGT------NKITARIPVGP------DPAGIAVTPDGKKVYVALSFXNTVSVIDT 273 (391)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEETTT------TEEEEEEECCS------SEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred EECCCCCEEEEEecCcCCCcEEEEECCC------CeEEEEEecCC------CccEEEEccCCCEEEEEcCCCCEEEEEEC
Confidence 333 5655444443 344888887763 13344454422 123467778888887664 4568999999
Q ss_pred CCCcEEEE
Q 036391 330 ETNSLRTV 337 (389)
Q Consensus 330 ~~~~~~~v 337 (389)
++++....
T Consensus 274 ~~~~~~~~ 281 (391)
T 1l0q_A 274 ATNTITAT 281 (391)
T ss_dssp TTTEEEEE
T ss_pred CCCcEEEE
Confidence 99876543
No 44
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=92.89 E-value=4.8 Score=35.74 Aligned_cols=196 Identities=13% Similarity=0.139 Sum_probs=95.7
Q ss_pred EEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcE
Q 036391 97 IALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSW 176 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W 176 (389)
++....++.+.|||..++++..+-.... .......+.+.+. +++ +.... ....+.+|+..++.+
T Consensus 23 l~~~~~d~~v~i~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~-~~~--l~~~~--------~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 23 IAICPNNHEVHIYEKSGNKWVQVHELKE-----HNGQVTGVDWAPD-SNR--IVTCG--------TDRNAYVWTLKGRTW 86 (372)
T ss_dssp EEEECSSSEEEEEEEETTEEEEEEEEEC-----CSSCEEEEEEETT-TTE--EEEEE--------TTSCEEEEEEETTEE
T ss_pred EEEEeCCCEEEEEeCCCCcEEeeeeecC-----CCCcccEEEEeCC-CCE--EEEEc--------CCCeEEEEECCCCee
Confidence 3333356788999988885322222211 1122445666663 233 22221 223578899888877
Q ss_pred EEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCce----eeeeCCCCccccCCCceE
Q 036391 177 RRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKE----FYQLPLPDSVNVSYANVH 250 (389)
Q Consensus 177 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~ 250 (389)
........ +. ..-.++. -+|.....+.. ...|..+|+.+.. ...+..+... ..
T Consensus 87 ~~~~~~~~----------~~--~~v~~~~~~~~~~~l~~~~~---d~~v~i~d~~~~~~~~~~~~~~~~~~~-----~i- 145 (372)
T 1k8k_C 87 KPTLVILR----------IN--RAARCVRWAPNEKKFAVGSG---SRVISICYFEQENDWWVCKHIKKPIRS-----TV- 145 (372)
T ss_dssp EEEEECCC----------CS--SCEEEEEECTTSSEEEEEET---TSSEEEEEEETTTTEEEEEEECTTCCS-----CE-
T ss_pred eeeEEeec----------CC--CceeEEEECCCCCEEEEEeC---CCEEEEEEecCCCcceeeeeeecccCC-----Ce-
Confidence 65432210 00 0001111 13444333332 2346666766543 2222222111 11
Q ss_pred EEEEEe-CCeEEEEEecCCCeEEEEEEeeCCC-----CCCe-------EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEE
Q 036391 251 VDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAV-----KESW-------TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLL 317 (389)
Q Consensus 251 ~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l 317 (389)
..+.-. +|.+.+++.. +..+.+|.+..... ...| ..+..+... .....-+++.++|..++.
T Consensus 146 ~~~~~~~~~~~l~~~~~-dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~ 219 (372)
T 1k8k_C 146 LSLDWHPNSVLLAAGSC-DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS-----CGWVHGVCFSANGSRVAW 219 (372)
T ss_dssp EEEEECTTSSEEEEEET-TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC-----SSCEEEEEECSSSSEEEE
T ss_pred eEEEEcCCCCEEEEEcC-CCCEEEEEcccccccccccccccccccchhhheEecCCC-----CCeEEEEEECCCCCEEEE
Confidence 123333 5665555444 44899998652110 0112 222322211 112445677788888888
Q ss_pred EEcCcEEEEEeCCCCcEE
Q 036391 318 EVRREKLVWFDLETNSLR 335 (389)
Q Consensus 318 ~~~~~~l~~yd~~~~~~~ 335 (389)
...++.+..||+++++..
T Consensus 220 ~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 220 VSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EETTTEEEEEEGGGTTEE
T ss_pred EeCCCEEEEEECCCCcee
Confidence 777788999999877643
No 45
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.85 E-value=1.4 Score=39.63 Aligned_cols=189 Identities=13% Similarity=0.061 Sum_probs=85.7
Q ss_pred CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc-EEEcc
Q 036391 102 SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS-WRRIS 180 (389)
Q Consensus 102 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~-W~~~~ 180 (389)
.+..+.|||..++.+..+-.... .......+.+.+.. ++ +.... ....+.+|+..++. |....
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~-----h~~~v~~~~~s~~~-~~--l~s~s--------~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSD-----HDKIVTCVDWAPKS-NR--IVTCS--------QDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCC-----CSSCEEEEEECTTT-CC--EEEEE--------TTSSEEEC------CCCCEE
T ss_pred CCCEEEEEEccCCceEEEEEEec-----CCceEEEEEEeCCC-CE--EEEEe--------CCCeEEEEEcCCCCceeeee
Confidence 46678899988875443333321 12234456666653 22 22221 22357788887765 44332
Q ss_pred cCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCce----eeeeCCCCccccCCCceEEEEE
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKE----FYQLPLPDSVNVSYANVHVDVG 254 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~----~~~i~~P~~~~~~~~~~~~~l~ 254 (389)
.... +. ..-.++.+ +|.....+.. ...|..+|+.+.+ ...+..|.. ... ..+.
T Consensus 95 ~~~~----------~~--~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~h~-----~~v-~~~~ 153 (377)
T 3dwl_C 95 VLLR----------LN--RAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHLKRPLR-----STI-LSLD 153 (377)
T ss_dssp ECCC----------CS--SCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEECSSCC-----SCE-EEEE
T ss_pred Eecc----------cC--CceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEeecccC-----CCe-EEEE
Confidence 2110 00 00011111 3443333222 2457778887664 233333221 111 1233
Q ss_pred Ee-CCeEEEEEecCCCeEEEEEEeeCCC-----CCCe-------EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC
Q 036391 255 SL-EGCLCVFCFYNLVYVDMWMMKEHAV-----KESW-------TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR 321 (389)
Q Consensus 255 ~~-~G~L~~~~~~~~~~l~iW~l~~~~~-----~~~W-------~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~ 321 (389)
-. +|.+.+.+.. +..+.+|.+...+. ...| ..+..+ .......-++++++|..++....+
T Consensus 154 ~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 154 WHPNNVLLAAGCA-DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY------PSGGWVHAVGFSPSGNALAYAGHD 226 (377)
T ss_dssp ECTTSSEEEEEES-SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC------CCSSSEEEEEECTTSSCEEEEETT
T ss_pred EcCCCCEEEEEeC-CCEEEEEEEEecccCCCccccccccccchhhhhhcc------cCCceEEEEEECCCCCEEEEEeCC
Confidence 33 5665555544 34899999863211 1122 112211 111224556778888888777777
Q ss_pred cEEEEEeCCCCcE
Q 036391 322 EKLVWFDLETNSL 334 (389)
Q Consensus 322 ~~l~~yd~~~~~~ 334 (389)
+.+..||+++++.
T Consensus 227 ~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 227 SSVTIAYPSAPEQ 239 (377)
T ss_dssp TEEC-CEECSTTS
T ss_pred CcEEEEECCCCCC
Confidence 7899999988764
No 46
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.73 E-value=4.8 Score=35.26 Aligned_cols=193 Identities=7% Similarity=0.057 Sum_probs=100.4
Q ss_pred cceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
.+.+.+.. ....+.++|+.|++....-..+. .. . ++.+++..+ + ++.... ....+.+|+..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~------~~-~-~~~~s~dg~-~-l~~~~~--------~~~~i~~~d~~ 70 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGY------DF-V-DTAITSDCS-N-VVVTSD--------FCQTLVQIETQ 70 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCC------CE-E-EEEECSSSC-E-EEEEES--------TTCEEEEEECS
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccC------Cc-c-eEEEcCCCC-E-EEEEeC--------CCCeEEEEECC
Confidence 34444443 45689999999988755332221 11 2 666776543 2 222221 22378889988
Q ss_pred CCcE--EEcccCCcccccccccccccccccC-ceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCc
Q 036391 173 INSW--RRISNLPRFLRDFYDYLYHSLFRKG-YGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYAN 248 (389)
Q Consensus 173 ~~~W--~~~~~~p~~~~~~~~~~~~~~~~~~-~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 248 (389)
++.- +.+.... . ... -.+.-+|...+..........|..+|+.+.+... ++.+...
T Consensus 71 ~~~~~~~~~~~~~-------------~-~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~------ 130 (331)
T 3u4y_A 71 LEPPKVVAIQEGQ-------------S-SMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDA------ 130 (331)
T ss_dssp SSSCEEEEEEECS-------------S-CCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTE------
T ss_pred CCceeEEecccCC-------------C-CccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCc------
Confidence 8763 2221100 0 011 1222345533333321122289999998766533 3432221
Q ss_pred eEEEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEE-EEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEE
Q 036391 249 VHVDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTK-LISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKL 324 (389)
Q Consensus 249 ~~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~-~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l 324 (389)
..+... +|+ |++........+.+|.++..+ ..... ...+... ....-++++++|+.+++... +..+
T Consensus 131 --~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g--~~~~~~~~~~~~~------~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 131 --VGIAISPNGNGLILIDRSSANTVRRFKIDADG--VLFDTGQEFISGG------TRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp --EEEEECTTSSCEEEEEETTTTEEEEEEECTTC--CEEEEEEEEECSS------SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred --cceEECCCCCEEEEEecCCCceEEEEEECCCC--cEeecCCccccCC------CCccceEECCCCCEEEEEeCCCCeE
Confidence 123333 665 555555444239999998533 11111 1222211 12355677889987777654 5679
Q ss_pred EEEeCCCCcE
Q 036391 325 VWFDLETNSL 334 (389)
Q Consensus 325 ~~yd~~~~~~ 334 (389)
..||+++++.
T Consensus 201 ~v~d~~~~~~ 210 (331)
T 3u4y_A 201 GILETQNPEN 210 (331)
T ss_dssp EEEECSSTTS
T ss_pred EEEECCCCcc
Confidence 9999998774
No 47
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=92.55 E-value=5.3 Score=35.37 Aligned_cols=74 Identities=9% Similarity=0.186 Sum_probs=48.2
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC-cEEEEE--eCCCCc
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR-EKLVWF--DLETNS 333 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~-~~l~~y--d~~~~~ 333 (389)
+|+..++.......+.+|.++.. ..+..+..+..... ...-++++++|..++..... +.+.+| |.++++
T Consensus 250 dG~~l~v~~~~~~~v~v~~~~~~---g~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 250 DGHFLYVSNRGYNTLAVFAVTAD---GHLTLIQQISTEGD-----FPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGK 321 (347)
T ss_dssp TSCEEEEEEETTTEEEEEEECGG---GCEEEEEEEECSSS-----CCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCEEEEEeCCCCEEEEEEECCC---CcEEEeEEEecCCC-----CcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCe
Confidence 77644444333458999999853 24666666654211 13457788899888877543 566667 888999
Q ss_pred EEEEE
Q 036391 334 LRTVK 338 (389)
Q Consensus 334 ~~~v~ 338 (389)
++.+.
T Consensus 322 l~~~~ 326 (347)
T 3hfq_A 322 LSLLQ 326 (347)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 98774
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=92.52 E-value=5.4 Score=35.40 Aligned_cols=196 Identities=7% Similarity=-0.090 Sum_probs=101.4
Q ss_pred ecceEEEee-CCceEEEEcCCcccc-cccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 93 CNGLIALCN-SVQELALFNPSTRKL-KTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 93 ~~GLl~l~~-~~~~~~V~NP~T~~~-~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
.++.+.+.. ..+.+.|+|+.|++. ..+|.... ..++.+++. . +++.... ....+.+++
T Consensus 52 ~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~---------p~~i~~~~~--g-~lyv~~~--------~~~~v~~iD 111 (328)
T 3dsm_A 52 RDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS---------PRYIHFLSD--E-KAYVTQI--------WDYRIFIIN 111 (328)
T ss_dssp ETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS---------EEEEEEEET--T-EEEEEEB--------SCSEEEEEE
T ss_pred ECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC---------CcEEEEeCC--C-eEEEEEC--------CCCeEEEEE
Confidence 345444443 456899999999887 44653321 234455443 3 4443321 234688899
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccccCCCce
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVSYANV 249 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~ 249 (389)
..+++-...-...... .... ....-+.-+|.+|..... ....|.++|+.+.+.. .++......
T Consensus 112 ~~t~~~~~~i~~g~~~-------~~~~-~p~~i~~~~~~lyv~~~~--~~~~v~viD~~t~~~~~~i~~g~~p~------ 175 (328)
T 3dsm_A 112 PKTYEITGYIECPDMD-------MESG-STEQMVQYGKYVYVNCWS--YQNRILKIDTETDKVVDELTIGIQPT------ 175 (328)
T ss_dssp TTTTEEEEEEECTTCC-------TTTC-BCCCEEEETTEEEEEECT--TCCEEEEEETTTTEEEEEEECSSCBC------
T ss_pred CCCCeEEEEEEcCCcc-------ccCC-CcceEEEECCEEEEEcCC--CCCEEEEEECCCCeEEEEEEcCCCcc------
Confidence 9887533211111000 0000 111123367778765321 2358999999987654 355433221
Q ss_pred EEEEEEeCCeEEEEEecCCC-------eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCc
Q 036391 250 HVDVGSLEGCLCVFCFYNLV-------YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE 322 (389)
Q Consensus 250 ~~~l~~~~G~L~~~~~~~~~-------~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~ 322 (389)
.+ ...-+|++++++..... .-.|++++.. +.. ....+.... .....-+++.++|+.+++...
T Consensus 176 ~i-~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~--t~~--v~~~~~~~~----g~~p~~la~~~d~~~lyv~~~-- 244 (328)
T 3dsm_A 176 SL-VMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE--TFT--VEKQFKFKL----GDWPSEVQLNGTRDTLYWINN-- 244 (328)
T ss_dssp CC-EECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT--TTE--EEEEEECCT----TCCCEEEEECTTSCEEEEESS--
T ss_pred ce-EEcCCCCEEEEECCCccCCccccCCceEEEEECC--CCe--EEEEEecCC----CCCceeEEEecCCCEEEEEcc--
Confidence 11 12347888777654210 1245555531 122 233343321 012345777777888877643
Q ss_pred EEEEEeCCCCcEE
Q 036391 323 KLVWFDLETNSLR 335 (389)
Q Consensus 323 ~l~~yd~~~~~~~ 335 (389)
.++.+|++++++.
T Consensus 245 ~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 245 DIWRMPVEADRVP 257 (328)
T ss_dssp SEEEEETTCSSCC
T ss_pred EEEEEECCCCcee
Confidence 6999999988763
No 49
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=92.33 E-value=2.5 Score=36.60 Aligned_cols=110 Identities=9% Similarity=0.039 Sum_probs=71.5
Q ss_pred eECCeEEEEccCCCCCcEEEEEECCCcee-eeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 205 LAGGALHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 205 ~~~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
+.+|.+|.-++. ...|..+|+.+.+- ..+ +|... |.-.++..+++|+++..... .+|+.+- +
T Consensus 62 ~~~~~Ly~stG~---~g~v~~iD~~Tgkv~~~~-l~~~~------FgeGit~~g~~Ly~ltw~~~---~v~V~D~----~ 124 (268)
T 3nok_A 62 FHQGHFFESTGH---QGTLRQLSLESAQPVWME-RLGNI------FAEGLASDGERLYQLTWTEG---LLFTWSG----M 124 (268)
T ss_dssp EETTEEEEEETT---TTEEEECCSSCSSCSEEE-ECTTC------CEEEEEECSSCEEEEESSSC---EEEEEET----T
T ss_pred EECCEEEEEcCC---CCEEEEEECCCCcEEeEE-CCCCc------ceeEEEEeCCEEEEEEccCC---EEEEEEC----C
Confidence 345677765543 23499999998765 335 66543 23346778899999876533 3566663 2
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE-EEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~-~~v~~ 339 (389)
.-.++.+|+... ...++..+|+.++....+.++..+|++|.+. ..|.+
T Consensus 125 Tl~~~~ti~~~~--------eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 125 PPQRERTTRYSG--------EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp TTEEEEEEECSS--------CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cCcEEEEEeCCC--------ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 345677777532 2345556788888876677899999999665 45655
No 50
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.10 E-value=4.3 Score=36.52 Aligned_cols=199 Identities=11% Similarity=0.006 Sum_probs=88.7
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
+.+|.++....++.+.|||..+++......... .........+.+.|.. .+ +.... ....+.+|+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~---~~h~~~V~~v~~spdg-~~--l~sgs--------~dg~v~iwd~ 168 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAK---YEHDDIVKTLSVFSDG-TQ--AVSGG--------KDFSVKVWDL 168 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEE---CCCSSCEEEEEECSSS-SE--EEEEE--------TTSCEEEEET
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeecc---CCCCCCEEEEEECCCC-CE--EEEEe--------CCCeEEEEEC
Confidence 335555555567789999999987654433221 0112234456666532 22 22221 2335778888
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCc
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYAN 248 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 248 (389)
.++.-... +. .+. ..-.++.+ +|.-+.++.. ....|..+|+.+.+... +...... .
T Consensus 169 ~~~~~~~~--~~----------~h~--~~v~~v~~s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~-----~ 227 (357)
T 4g56_B 169 SQKAVLKS--YN----------AHS--SEVNCVAACPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASD-----T 227 (357)
T ss_dssp TTTEEEEE--EC----------CCS--SCEEEEEECTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCC-----S
T ss_pred CCCcEEEE--Ec----------CCC--CCEEEEEEccCCCceeeeec--cCCceEEEECCCCceeeeeeecccc-----c
Confidence 77643221 11 000 00011211 2221122211 12457778887654332 2222111 1
Q ss_pred eEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEE-EEcCcEEE
Q 036391 249 VHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLL-EVRREKLV 325 (389)
Q Consensus 249 ~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l-~~~~~~l~ 325 (389)
.-..+.-. ++.+.++.. .+..+.||-+.... .+..+.... ....-++++++|..++. ...++.+.
T Consensus 228 ~v~~v~~sp~~~~~la~g~-~d~~i~~wd~~~~~------~~~~~~~~~-----~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGD-ETGNVSLVNIKNPD------SAQTSAVHS-----QNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp CEEEEEECTTSTTEEEEEE-SSSCEEEEESSCGG------GCEEECCCS-----SCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred cccchhhhhcccceEEEee-cccceeEEECCCCc------EeEEEeccc-----eeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 11123332 345544443 34489999876421 122222211 12445677777755444 44566799
Q ss_pred EEeCCCCcEEEE
Q 036391 326 WFDLETNSLRTV 337 (389)
Q Consensus 326 ~yd~~~~~~~~v 337 (389)
+||+++++....
T Consensus 296 iwd~~~~~~~~~ 307 (357)
T 4g56_B 296 VLDADFSEVFRD 307 (357)
T ss_dssp EECTTSCEEEEE
T ss_pred EEECCCCcEeEE
Confidence 999999876543
No 51
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=92.09 E-value=4.6 Score=36.04 Aligned_cols=116 Identities=15% Similarity=0.092 Sum_probs=67.9
Q ss_pred ECCe-EEEEccCCCCCcEEEEEECCCceeeeeC----CCCccccCCCceEEEEEEe-CCeEEEEEecC-CCeEEEEEEee
Q 036391 206 AGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQLP----LPDSVNVSYANVHVDVGSL-EGCLCVFCFYN-LVYVDMWMMKE 278 (389)
Q Consensus 206 ~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~----~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~-~~~l~iW~l~~ 278 (389)
-+|. +|.. .. ....|..||+.+.++..+. .|.... . ...+... +|+..++.... ...+.||.++.
T Consensus 220 pdg~~l~v~-~~--~~~~v~v~~~~~g~~~~~~~~~~~~~~~~----~-~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~ 291 (361)
T 3scy_A 220 SDGKFAYLI-NE--IGGTVIAFRYADGMLDEIQTVAADTVNAQ----G-SGDIHLSPDGKYLYASNRLKADGVAIFKVDE 291 (361)
T ss_dssp TTSSEEEEE-ET--TTCEEEEEEEETTEEEEEEEEESCSSCCC----C-EEEEEECTTSSEEEEEECSSSCEEEEEEECT
T ss_pred CCCCEEEEE-cC--CCCeEEEEEecCCceEEeEEEecCCCCCC----C-cccEEECCCCCEEEEECCCCCCEEEEEEEcC
Confidence 3575 4443 32 2357888888877665432 222211 1 1233333 77755555444 45899999974
Q ss_pred CCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEE--EeCCCCcEEEE
Q 036391 279 HAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVW--FDLETNSLRTV 337 (389)
Q Consensus 279 ~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~--yd~~~~~~~~v 337 (389)
. ...+..+..+.... ...-++++++|+.++... .++.+.+ +|+++++++.+
T Consensus 292 ~--~g~~~~~~~~~~g~------~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 292 T--NGTLTKVGYQLTGI------HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp T--TCCEEEEEEEECSS------CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEEC
T ss_pred C--CCcEEEeeEecCCC------CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeec
Confidence 2 24566666665421 234577888998888775 3445555 68888888776
No 52
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.77 E-value=6.2 Score=34.45 Aligned_cols=31 Identities=13% Similarity=0.240 Sum_probs=23.1
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCc
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~ 333 (389)
..-++++++|..|+-...++.+.+||+++++
T Consensus 309 v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 309 CTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 4456778898888777777789999998874
No 53
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=91.71 E-value=6.9 Score=34.84 Aligned_cols=184 Identities=10% Similarity=0.131 Sum_probs=90.0
Q ss_pred eCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcc
Q 036391 101 NSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRIS 180 (389)
Q Consensus 101 ~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~ 180 (389)
..+..+.|||..++++........ . +......+.+.|.. .+ +.... ....+.+++..++.+..+.
T Consensus 35 ~~D~~i~iw~~~~~~~~~~~~~~~--~--h~~~v~~~~~sp~g-~~--l~s~s--------~D~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 35 GGDRRIRIWGTEGDSWICKSVLSE--G--HQRTVRKVAWSPCG-NY--LASAS--------FDATTCIWKKNQDDFECVT 99 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECS--S--CSSCEEEEEECTTS-SE--EEEEE--------TTSCEEEEEECCC-EEEEE
T ss_pred cCCCeEEEEEcCCCcceeeeeecc--c--cCCcEEEEEECCCC-CE--EEEEE--------CCCcEEEEEccCCCeEEEE
Confidence 356678889887776432211111 1 12234456666643 22 22221 2235678887777665443
Q ss_pred cCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCce-eeeeC-CCCccccCCCceEEEEEEe
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKE-FYQLP-LPDSVNVSYANVHVDVGSL 256 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~-~P~~~~~~~~~~~~~l~~~ 256 (389)
.+. .+.. .-.++.+ +|.+...+.. ...|..+|+.++. ...+. +.... .... .+.-.
T Consensus 100 ~~~----------~h~~--~v~~v~~sp~~~~l~s~s~---D~~v~iwd~~~~~~~~~~~~~~~h~----~~v~-~~~~~ 159 (345)
T 3fm0_A 100 TLE----------GHEN--EVKSVAWAPSGNLLATCSR---DKSVWVWEVDEEDEYECVSVLNSHT----QDVK-HVVWH 159 (345)
T ss_dssp EEC----------CCSS--CEEEEEECTTSSEEEEEET---TSCEEEEEECTTSCEEEEEEECCCC----SCEE-EEEEC
T ss_pred Ecc----------CCCC--CceEEEEeCCCCEEEEEEC---CCeEEEEECCCCCCeEEEEEecCcC----CCeE-EEEEC
Confidence 322 1100 0011211 3443333222 2457778876542 22221 11111 1111 22222
Q ss_pred -CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeC
Q 036391 257 -EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 329 (389)
Q Consensus 257 -~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~ 329 (389)
+|.+.+.+.. +..+.+|.+.. ..|.....+.... ....-++++++|..++....++.+.+||.
T Consensus 160 p~~~~l~s~s~-d~~i~~w~~~~----~~~~~~~~~~~h~-----~~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 160 PSQELLASASY-DDTVKLYREEE----DDWVCCATLEGHE-----STVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp SSSSCEEEEET-TSCEEEEEEET----TEEEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred CCCCEEEEEeC-CCcEEEEEecC----CCEEEEEEecCCC-----CceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 5665555444 44899998874 3576665554322 12455778888888777766777888874
No 54
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.41 E-value=6.7 Score=34.10 Aligned_cols=199 Identities=9% Similarity=0.027 Sum_probs=96.0
Q ss_pred cceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+|-+.+.+ ....++.+||.+++...+..+. ...++.+++..+ ++ +.. ...+.+|+..
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~---------~~~~i~~~~dG~---l~-v~~---------~~~l~~~d~~ 81 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDA---------PVSSVALRQSGG---YV-ATI---------GTKFCALNWK 81 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSS---------CEEEEEEBTTSS---EE-EEE---------TTEEEEEETT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCC---------ceEEEEECCCCC---EE-EEE---------CCeEEEEECC
Confidence 45444444 4568999999998765543221 133566676543 22 221 1267889999
Q ss_pred CCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccCC--------CCCcEEEEEECCCceeeeeCCCCcc
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKS--------STRSVIMAFNLVAKEFYQLPLPDSV 242 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~--------~~~~~il~fD~~~e~~~~i~~P~~~ 242 (389)
++.++.+...+.. ........+. -+|.+|+-.... .....|..+|..... ..+. ...
T Consensus 82 ~g~~~~~~~~~~~----------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~--~~~ 148 (297)
T 3g4e_A 82 EQSAVVLATVDND----------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYF--DQV 148 (297)
T ss_dssp TTEEEEEEECCTT----------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEE--EEE
T ss_pred CCcEEEEEecCCC----------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEe--ecc
Confidence 9988876543210 0001112232 368865533211 123578888876432 2211 011
Q ss_pred ccCCCceEEEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEE-EcCCCCCCCcceeeeEEEEeCCCEEEEEE
Q 036391 243 NVSYANVHVDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLIS-VQEPTPTRSFLFLRPLGYSRNGVKLLLEV 319 (389)
Q Consensus 243 ~~~~~~~~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~-i~~~~~~~~~~~~~p~~~~~~g~~i~l~~ 319 (389)
. . .-.++.. +|+ |+++... ...+.+|.++.. ......... ..... ......-+++.++|. +++..
T Consensus 149 ~---~--pngi~~spdg~~lyv~~~~-~~~i~~~~~d~~--~G~~~~~~~~~~~~~---~~~~p~g~~~d~~G~-lwva~ 216 (297)
T 3g4e_A 149 D---I--SNGLDWSLDHKIFYYIDSL-SYSVDAFDYDLQ--TGQISNRRSVYKLEK---EEQIPDGMCIDAEGK-LWVAC 216 (297)
T ss_dssp S---B--EEEEEECTTSCEEEEEEGG-GTEEEEEEECTT--TCCEEEEEEEEECCG---GGCEEEEEEEBTTSC-EEEEE
T ss_pred c---c--ccceEEcCCCCEEEEecCC-CCcEEEEeccCC--CCcccCcEEEEECCC---CCCCCCeeEECCCCC-EEEEE
Confidence 0 0 1123333 564 5555443 335555555411 122221111 11111 001223356666775 55554
Q ss_pred -cCcEEEEEeCCCCcE-EEEEE
Q 036391 320 -RREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 320 -~~~~l~~yd~~~~~~-~~v~~ 339 (389)
....+..||+++++. ..+.+
T Consensus 217 ~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp ETTTEEEEECTTTCCEEEEEEC
T ss_pred cCCCEEEEEcCCCceEEEEEEC
Confidence 456799999996654 55554
No 55
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.37 E-value=7.2 Score=34.45 Aligned_cols=122 Identities=12% Similarity=0.038 Sum_probs=67.3
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCC-CCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPL-PDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~-P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
-+|.+|..... .....|..||+.+.+.+.+.. +.... ... .++. -+|+..++.......+.+|.++..+
T Consensus 49 pdg~l~~~~~~-~~~~~v~~~~~~~g~~~~~~~~~~~~~---~p~--~~a~spdg~~l~~~~~~~~~v~v~~~~~~g--- 119 (347)
T 3hfq_A 49 AKDCLYSVDKE-DDEGGIAAWQIDGQTAHKLNTVVAPGT---PPA--YVAVDEARQLVYSANYHKGTAEVMKIAADG--- 119 (347)
T ss_dssp TTCEEEEEEEE-TTEEEEEEEEEETTEEEEEEEEEEESC---CCS--EEEEETTTTEEEEEETTTTEEEEEEECTTS---
T ss_pred cCCeEEEEEec-CCCceEEEEEecCCcEEEeeeeecCCC---CCE--EEEECCCCCEEEEEeCCCCEEEEEEeCCCC---
Confidence 36887766541 123579999998777666532 21111 111 2333 3676545544444589999997532
Q ss_pred CeEEEEEEcCCCCCC----CcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCC-CCcEEEE
Q 036391 284 SWTKLISVQEPTPTR----SFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLE-TNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~----~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~-~~~~~~v 337 (389)
....+..+....... ......-++++++|. ++.... ...+..||++ ++++..+
T Consensus 120 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 120 ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 344444443321100 011233467788888 555433 4579999998 6666544
No 56
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=91.27 E-value=7.1 Score=34.15 Aligned_cols=199 Identities=12% Similarity=-0.032 Sum_probs=98.3
Q ss_pred eEEEeeCCceEEEEcC-CcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC
Q 036391 96 LIALCNSVQELALFNP-STRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN 174 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP-~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~ 174 (389)
+++....++.+.+||. .+++...+.... .......+.+.+ +.+-+. .. ....+.+|+.++.
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~------~~~~v~~l~~~~--~~~l~s--~~--------~d~~i~iwd~~~~ 132 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNE------ANLGICRICKYG--DDKLIA--AS--------WDGLIEVIDPRNY 132 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCC------CCSCEEEEEEET--TTEEEE--EE--------TTSEEEEECHHHH
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccC------CCCceEEEEeCC--CCEEEE--Ec--------CCCeEEEEccccc
Confidence 3555556778999999 888776665411 112244566666 333222 11 2336777776530
Q ss_pred ---c----EEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCC-ce--eeeeCCCCcccc
Q 036391 175 ---S----WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVA-KE--FYQLPLPDSVNV 244 (389)
Q Consensus 175 ---~----W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~-e~--~~~i~~P~~~~~ 244 (389)
. .+.+.... . ...-.++.+.+.-...+. ....|..+|+.+ .. ......+...
T Consensus 133 ~~~~~~~~~~~~~~~~------------~-~~~v~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~~~-- 194 (342)
T 1yfq_A 133 GDGVIAVKNLNSNNTK------------V-KNKIFTMDTNSSRLIVGM---NNSQVQWFRLPLCEDDNGTIEESGLKY-- 194 (342)
T ss_dssp TTBCEEEEESCSSSSS------------S-CCCEEEEEECSSEEEEEE---STTEEEEEESSCCTTCCCEEEECSCSS--
T ss_pred ccccccccCCeeeEEe------------e-CCceEEEEecCCcEEEEe---CCCeEEEEECCccccccceeeecCCCC--
Confidence 0 11111111 0 001112222222222222 235788999887 32 3333322211
Q ss_pred CCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC----CCcceeeeEEEEeCCCEEEEE
Q 036391 245 SYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT----RSFLFLRPLGYSRNGVKLLLE 318 (389)
Q Consensus 245 ~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~----~~~~~~~p~~~~~~g~~i~l~ 318 (389)
. -..+... +|.+.+++.. ...+.||.++..+..........+...... .......-++++++|..++..
T Consensus 195 ---~-i~~i~~~~~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 195 ---Q-IRDVALLPKEQEGYACSSI-DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp ---C-EEEEEECSGGGCEEEEEET-TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred ---c-eeEEEECCCCCCEEEEEec-CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 1 1233333 4666555554 448999999864211111122222221110 001124556777888888777
Q ss_pred EcCcEEEEEeCCCCcEE
Q 036391 319 VRREKLVWFDLETNSLR 335 (389)
Q Consensus 319 ~~~~~l~~yd~~~~~~~ 335 (389)
..++.+.+||+++++..
T Consensus 270 ~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 270 GSDGIISCWNLQTRKKI 286 (342)
T ss_dssp ETTSCEEEEETTTTEEE
T ss_pred cCCceEEEEcCccHhHh
Confidence 77778999999988753
No 57
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.85 E-value=8.8 Score=34.49 Aligned_cols=197 Identities=9% Similarity=0.074 Sum_probs=97.3
Q ss_pred EeeecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 90 LGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 90 ~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
....+|.|.+......++.+|+.|++.+.--.... ... ....+ + ++ .|+ +.. ....+..|
T Consensus 99 ~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~--~~~-~~p~~----~---~~-~v~-v~~--------~~g~l~~~ 158 (376)
T 3q7m_A 99 VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG--EAL-SRPVV----S---DG-LVL-IHT--------SNGQLQAL 158 (376)
T ss_dssp EEEETTEEEEEETTSEEEEEETTTCCEEEEEECSS--CCC-SCCEE----E---TT-EEE-EEC--------TTSEEEEE
T ss_pred ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC--ceE-cCCEE----E---CC-EEE-EEc--------CCCeEEEE
Confidence 34567888777667789999999987542111111 000 11111 1 12 222 211 22367788
Q ss_pred EcCCC--cEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCce--eee-eCCCCcccc
Q 036391 170 SLKIN--SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKE--FYQ-LPLPDSVNV 244 (389)
Q Consensus 170 ss~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~--~~~-i~~P~~~~~ 244 (389)
+..++ .|+.....+. ........++..+|.+|.-. ....+.++|..+.+ |+. ...|.....
T Consensus 159 d~~tG~~~W~~~~~~~~----------~~~~~~~~~~~~~~~v~~g~----~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 159 NEADGAVKWTVNLDMPS----------LSLRGESAPTTAFGAAVVGG----DNGRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp ETTTCCEEEEEECCC---------------CCCCCCEEETTEEEECC----TTTEEEEEETTTCCEEEEEECCC------
T ss_pred ECCCCcEEEEEeCCCCc----------eeecCCCCcEEECCEEEEEc----CCCEEEEEECCCCcEEEEEecccCCCCcc
Confidence 88777 4886543221 00111234566788887632 23589999997654 443 233321100
Q ss_pred --CCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCc
Q 036391 245 --SYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE 322 (389)
Q Consensus 245 --~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~ 322 (389)
............+|.+++..... .+ ..++-...+..|... ... ...| .+ +++.|++...++
T Consensus 225 ~~~~~~~~~~p~~~~~~v~~~~~~g--~l--~~~d~~tG~~~w~~~----~~~------~~~~-~~--~~~~l~~~~~~g 287 (376)
T 3q7m_A 225 IDRLSDVDTTPVVVNGVVFALAYNG--NL--TALDLRSGQIMWKRE----LGS------VNDF-IV--DGNRIYLVDQND 287 (376)
T ss_dssp -----CCCCCCEEETTEEEEECTTS--CE--EEEETTTCCEEEEEC----CCC------EEEE-EE--ETTEEEEEETTC
T ss_pred cccccccCCCcEEECCEEEEEecCc--EE--EEEECCCCcEEeecc----CCC------CCCc-eE--ECCEEEEEcCCC
Confidence 00000112234567776664322 23 333321123456432 111 1122 22 366888887777
Q ss_pred EEEEEeCCCCcEEEE
Q 036391 323 KLVWFDLETNSLRTV 337 (389)
Q Consensus 323 ~l~~yd~~~~~~~~v 337 (389)
.++++|+++++..+-
T Consensus 288 ~l~~~d~~tG~~~w~ 302 (376)
T 3q7m_A 288 RVMALTIDGGVTLWT 302 (376)
T ss_dssp CEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEEEe
Confidence 899999999986554
No 58
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=90.80 E-value=7.7 Score=33.73 Aligned_cols=98 Identities=12% Similarity=0.064 Sum_probs=56.3
Q ss_pred EEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCc
Q 036391 222 VIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSF 300 (389)
Q Consensus 222 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~ 300 (389)
.|..+|+.+.+...+.++.... . ...+... +|+..++. ...+.+|-++. ...+..+....
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~---~--~~~~~~s~dg~~l~~~---~~~v~~~d~~~------~~~~~~~~~~~----- 280 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDV---F--YFSTAVNPAKTRAFGA---YNVLESFDLEK------NASIKRVPLPH----- 280 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSS---C--EEEEEECTTSSEEEEE---ESEEEEEETTT------TEEEEEEECSS-----
T ss_pred ceEEEeCCCCCceEeecCCCCC---c--eeeEEECCCCCEEEEe---CCeEEEEECCC------CcCcceecCCC-----
Confidence 5789999887765444332211 1 1123332 55544444 23677776543 23344444322
Q ss_pred ceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE-EEEE
Q 036391 301 LFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR-TVKI 339 (389)
Q Consensus 301 ~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~-~v~~ 339 (389)
...-++++++|+.++....++.+.+||+++++.. .+..
T Consensus 281 -~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 281 -SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp -CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred -ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 1344677888888888755678999999987654 3443
No 59
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.60 E-value=7.5 Score=33.25 Aligned_cols=203 Identities=10% Similarity=0.072 Sum_probs=101.6
Q ss_pred eecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 92 SCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 92 s~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
+.+|-+.+.+ ....+.++||..+....++.... .........++.+++..+. ++... . .....+.+|+
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~--~~~~~~~p~~i~~~~~~g~--l~v~~-~------~~~~~i~~~d 106 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGK--RDSQLLYPNRVAVVRNSGD--IIVTE-R------SPTHQIQIYN 106 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSS--STTCBSSEEEEEEETTTTE--EEEEE-C------GGGCEEEEEC
T ss_pred CCCCCEEEEECCCCEEEEECCCCcEEEEecccCC--CcccccCceEEEEEcCCCe--EEEEc-C------CCCCEEEEEC
Confidence 4456665554 35678999988666555554321 1111222345566433332 22221 0 0134677888
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCc
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYAN 248 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 248 (389)
.....-+.+.... . ....++. -+|.+|.... ....|..||...+....+..+.... .
T Consensus 107 ~~g~~~~~~~~~~------------~--~~~~~i~~~~~g~l~v~~~---~~~~i~~~~~~g~~~~~~~~~~~~~---~- 165 (286)
T 1q7f_A 107 QYGQFVRKFGATI------------L--QHPRGVTVDNKGRIIVVEC---KVMRVIIFDQNGNVLHKFGCSKHLE---F- 165 (286)
T ss_dssp TTSCEEEEECTTT------------C--SCEEEEEECTTSCEEEEET---TTTEEEEECTTSCEEEEEECTTTCS---S-
T ss_pred CCCcEEEEecCcc------------C--CCceEEEEeCCCCEEEEEC---CCCEEEEEcCCCCEEEEeCCCCccC---C-
Confidence 4433223232111 0 0112233 3688776533 2357999998777666664432221 1
Q ss_pred eEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCc-EEE
Q 036391 249 VHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RRE-KLV 325 (389)
Q Consensus 249 ~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~-~l~ 325 (389)
...++.. +|.|++.... ...+.+|-.+ ... +..+.... ......-+++.++|. +++.. ... .+.
T Consensus 166 -p~~i~~~~~g~l~v~~~~-~~~i~~~~~~-----g~~--~~~~~~~g---~~~~p~~i~~d~~G~-l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 166 -PNGVVVNDKQEIFISDNR-AHCVKVFNYE-----GQY--LRQIGGEG---ITNYPIGVGINSNGE-ILIADNHNNFNLT 232 (286)
T ss_dssp -EEEEEECSSSEEEEEEGG-GTEEEEEETT-----CCE--EEEESCTT---TSCSEEEEEECTTCC-EEEEECSSSCEEE
T ss_pred -cEEEEECCCCCEEEEECC-CCEEEEEcCC-----CCE--EEEEccCC---ccCCCcEEEECCCCC-EEEEeCCCCEEEE
Confidence 1234444 6887776543 3366666532 122 22333211 011234466667775 45544 343 799
Q ss_pred EEeCCCCcEEEEEE
Q 036391 326 WFDLETNSLRTVKI 339 (389)
Q Consensus 326 ~yd~~~~~~~~v~~ 339 (389)
.||.+++....+..
T Consensus 233 ~~~~~g~~~~~~~~ 246 (286)
T 1q7f_A 233 IFTQDGQLISALES 246 (286)
T ss_dssp EECTTSCEEEEEEE
T ss_pred EECCCCCEEEEEcc
Confidence 99998877777754
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.56 E-value=10 Score=34.64 Aligned_cols=193 Identities=13% Similarity=0.065 Sum_probs=100.6
Q ss_pred eecceEEEee-CCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 92 SCNGLIALCN-SVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 92 s~~GLl~l~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+.+|-+++.. .+..+.+||+.+++... ++... ....++.+++..+ + ++... . ....+.+|
T Consensus 178 ~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~-~-l~~~~---~-----~~~~i~~~ 239 (433)
T 3bws_A 178 PEHNELWVSQMQANAVHVFDLKTLAYKATVDLTG--------KWSKILLYDPIRD-L-VYCSN---W-----ISEDISVI 239 (433)
T ss_dssp GGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSS--------SSEEEEEEETTTT-E-EEEEE---T-----TTTEEEEE
T ss_pred cCCCEEEEEECCCCEEEEEECCCceEEEEEcCCC--------CCeeEEEEcCCCC-E-EEEEe---c-----CCCcEEEE
Confidence 4466555554 45689999998866543 32111 1234456665433 2 22111 1 22368889
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccC-CC----CCcEEEEEECCCceeeee-CCCCc
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPK-SS----TRSVIMAFNLVAKEFYQL-PLPDS 241 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~-~~----~~~~il~fD~~~e~~~~i-~~P~~ 241 (389)
+.+++.....-... . ...++. -+|...+.+.. .. ....|..+|+.+.+.... ..+..
T Consensus 240 d~~~~~~~~~~~~~----------~-----~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~ 304 (433)
T 3bws_A 240 DRKTKLEIRKTDKI----------G-----LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGN 304 (433)
T ss_dssp ETTTTEEEEECCCC----------S-----EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEEC
T ss_pred ECCCCcEEEEecCC----------C-----CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCC
Confidence 98887653321111 0 011222 24644444432 11 235788999987654332 22111
Q ss_pred cccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc
Q 036391 242 VNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 320 (389)
Q Consensus 242 ~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~ 320 (389)
. ..+.. -+|...++.......+.+|.++. ...+..+.... ...-++++++|..++....
T Consensus 305 ~--------~~~~~~~~g~~l~~~~~~~~~v~v~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~ 364 (433)
T 3bws_A 305 K--------RHIVSGNTENKIYVSDMCCSKIEVYDLKE------KKVQKSIPVFD------KPNTIALSPDGKYLYVSCR 364 (433)
T ss_dssp E--------EEEEECSSTTEEEEEETTTTEEEEEETTT------TEEEEEEECSS------SEEEEEECTTSSEEEEEEC
T ss_pred c--------ceEEECCCCCEEEEEecCCCEEEEEECCC------CcEEEEecCCC------CCCeEEEcCCCCEEEEEec
Confidence 1 12222 25643333333445899998763 22334444321 2445777888888887754
Q ss_pred C---------------cEEEEEeCCCCcEEEE
Q 036391 321 R---------------EKLVWFDLETNSLRTV 337 (389)
Q Consensus 321 ~---------------~~l~~yd~~~~~~~~v 337 (389)
. +.+..||+++++....
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred CCCccccccccccccceEEEEEECCCCcEEEE
Confidence 2 3799999998876543
No 61
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=90.17 E-value=9.1 Score=33.57 Aligned_cols=197 Identities=10% Similarity=0.046 Sum_probs=95.7
Q ss_pred eEEEeeCCceEEEEcCCccc--ccccCCCCCCCCCCCceeEEEEeeecC-CCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 96 LIALCNSVQELALFNPSTRK--LKTLPLPPCFVGFPSAFIFYGFGQDKS-NDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~--~~~LP~~~~~~~~~~~~~~~~~g~~~~-~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+++....+..+.|||..+++ ...+..... .. ......+.+.+. +.+-+.+.... ....+.+|+.+
T Consensus 131 ~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~--~~--~~~v~~~~~~~~~~~~~~~l~~~~--------~d~~i~i~d~~ 198 (357)
T 3i2n_A 131 EIVTGSRDGTVKVWDPRQKDDPVANMEPVQG--EN--KRDCWTVAFGNAYNQEERVVCAGY--------DNGDIKLFDLR 198 (357)
T ss_dssp EEEEEETTSCEEEECTTSCSSCSEEECCCTT--SC--CCCEEEEEEECCCC-CCCEEEEEE--------TTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEeCCCCCCcceeccccCC--CC--CCceEEEEEEeccCCCCCEEEEEc--------cCCeEEEEECc
Confidence 44444456789999998876 233332221 11 112223333221 11222333322 23478899988
Q ss_pred CCcEEEcccCCcccccccccccccccccCceeeE-----CCeEEEEccCCCCCcEEEEEECCCceeee-eC---CCCccc
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA-----GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LP---LPDSVN 243 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~-----~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~---~P~~~~ 243 (389)
++.=....... ..-.++.+ +|.....+.. ...|..+|+.+..... +. +...
T Consensus 199 ~~~~~~~~~~~---------------~~v~~~~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~-- 258 (357)
T 3i2n_A 199 NMALRWETNIK---------------NGVCSLEFDRKDISMNKLVATSL---EGKFHVFDMRTQHPTKGFASVSEKAH-- 258 (357)
T ss_dssp TTEEEEEEECS---------------SCEEEEEESCSSSSCCEEEEEES---TTEEEEEEEEEEETTTEEEEEEEECC--
T ss_pred cCceeeecCCC---------------CceEEEEcCCCCCCCCEEEEECC---CCeEEEEeCcCCCcccceeeeccCCC--
Confidence 77532221111 00011222 4444444332 3568888887643221 11 1111
Q ss_pred cCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCC-------------CCeEEEEEEcCCCCCCCcceeeeEEEE
Q 036391 244 VSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVK-------------ESWTKLISVQEPTPTRSFLFLRPLGYS 309 (389)
Q Consensus 244 ~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~-------------~~W~~~~~i~~~~~~~~~~~~~p~~~~ 309 (389)
.... ..+.-. +|.-+++....+..+.||.+...... ..+..+..+.... ....-++++
T Consensus 259 --~~~v-~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s 330 (357)
T 3i2n_A 259 --KSTV-WQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLST-----QPISSLDWS 330 (357)
T ss_dssp --SSCE-EEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCS-----SCEEEEEEC
T ss_pred --cCCE-EEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCC-----CCeeEEEEc
Confidence 1111 123333 56634444444558999999853211 1345555555322 124556778
Q ss_pred eCCCEEEE-EEcCcEEEEEeCCCC
Q 036391 310 RNGVKLLL-EVRREKLVWFDLETN 332 (389)
Q Consensus 310 ~~g~~i~l-~~~~~~l~~yd~~~~ 332 (389)
++|..+++ ...++.+.+||+.+.
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCCeEEEEecCCCcEEEEECCCc
Confidence 88887774 556778999998764
No 62
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.90 E-value=8.3 Score=33.32 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=90.4
Q ss_pred eEEEeeCCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC
Q 036391 96 LIALCNSVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN 174 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~ 174 (389)
+|.....+..++++|+.|++.+. ++.... . .. ....+.+.. +++. . ....+..|+. ++
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~----~-~~--~~~~~~pdG---~ilv-s---------~~~~V~~~d~-~G 65 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKG----W-EC--NSVAATKAG---EILF-S---------YSKGAKMITR-DG 65 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTT----C-CC--CEEEECTTS---CEEE-E---------CBSEEEEECT-TS
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCcc----C-CC--cCeEECCCC---CEEE-e---------CCCCEEEECC-CC
Confidence 34443356788999998887654 332210 0 01 112233322 2332 1 1235777887 44
Q ss_pred --cEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEE
Q 036391 175 --SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVD 252 (389)
Q Consensus 175 --~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 252 (389)
.|+.-.... .. .....+.-+|.++..... ....++.||...+.-..+.+..............
T Consensus 66 ~~~W~~~~~~~----------~~---~~~~~~~~dG~~lv~~~~--~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v 130 (276)
T 3no2_A 66 RELWNIAAPAG----------CE---MQTARILPDGNALVAWCG--HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQI 130 (276)
T ss_dssp CEEEEEECCTT----------CE---EEEEEECTTSCEEEEEES--TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCC
T ss_pred CEEEEEcCCCC----------cc---ccccEECCCCCEEEEecC--CCCEEEEEeCCCCEEEEEeccCCCCcccccccCc
Confidence 576543111 00 111234456776655332 1357888998665444444332211000000101
Q ss_pred EEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 253 VGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 253 l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
-...+|.+.++... ...+..|-.+ | +..|.... ... ..-.....+|++++......+++.+|++|+
T Consensus 131 ~~~~~G~~lv~~~~-~~~v~~~d~~--G-~~~w~~~~--~~~--------~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 131 NKNKKGNYLVPLFA-TSEVREIAPN--G-QLLNSVKL--SGT--------PFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp EECTTSCEEEEETT-TTEEEEECTT--S-CEEEEEEC--SSC--------CCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred eECCCCCEEEEecC-CCEEEEECCC--C-CEEEEEEC--CCC--------ccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 12236666554433 2345444433 2 44564332 111 111333457777776666668999999977
Q ss_pred cEEE
Q 036391 333 SLRT 336 (389)
Q Consensus 333 ~~~~ 336 (389)
+..+
T Consensus 197 ~~~w 200 (276)
T 3no2_A 197 RIVR 200 (276)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 6543
No 63
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.60 E-value=18 Score=36.18 Aligned_cols=189 Identities=9% Similarity=0.003 Sum_probs=95.9
Q ss_pred cc-eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~G-Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+| +|.....++.+.|||..+++....-... ......+.+.+... + +.... ....+.+|+..
T Consensus 66 ~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~-~--l~~~~--------~dg~i~vw~~~ 127 (814)
T 3mkq_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAH-------PDYIRSIAVHPTKP-Y--VLSGS--------DDLTVKLWNWE 127 (814)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSS-E--EEEEE--------TTSEEEEEEGG
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEecC-------CCCEEEEEEeCCCC-E--EEEEc--------CCCEEEEEECC
Confidence 44 4555556778999999888764422111 11234455555432 2 22221 23467888887
Q ss_pred CC-cEEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCC
Q 036391 173 IN-SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYA 247 (389)
Q Consensus 173 ~~-~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 247 (389)
++ ..... .. .+. ..-.++.+ +|.....+.. ...|..+|+.+..... +..+...
T Consensus 128 ~~~~~~~~--~~----------~~~--~~v~~~~~~p~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~~~~~~----- 185 (814)
T 3mkq_A 128 NNWALEQT--FE----------GHE--HFVMCVAFNPKDPSTFASGCL---DRTVKVWSLGQSTPNFTLTTGQER----- 185 (814)
T ss_dssp GTSEEEEE--EE----------CCS--SCEEEEEEETTEEEEEEEEET---TSEEEEEETTCSSCSEEEECCCTT-----
T ss_pred CCceEEEE--Ec----------CCC--CcEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcceeEEecCCCC-----
Confidence 65 22211 11 000 00112222 3444333332 3578888986644322 2222111
Q ss_pred ceEEEEEEe---CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEE
Q 036391 248 NVHVDVGSL---EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKL 324 (389)
Q Consensus 248 ~~~~~l~~~---~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l 324 (389)
... .+.-. +|.+.+++.. ...+.+|.+.. ......+.... ....-++++++|..++....++.+
T Consensus 186 ~v~-~~~~~~~~~~~~l~~~~~-dg~i~~~d~~~------~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~dg~v 252 (814)
T 3mkq_A 186 GVN-YVDYYPLPDKPYMITASD-DLTIKIWDYQT------KSCVATLEGHM-----SNVSFAVFHPTLPIIISGSEDGTL 252 (814)
T ss_dssp CCC-EEEECCSTTCCEEEEECT-TSEEEEEETTT------TEEEEEEECCS-----SCEEEEEECSSSSEEEEEETTSCE
T ss_pred CEE-EEEEEECCCCCEEEEEeC-CCEEEEEECCC------CcEEEEEcCCC-----CCEEEEEEcCCCCEEEEEeCCCeE
Confidence 111 12222 5655555443 44899997753 12333333221 124556778888888877777789
Q ss_pred EEEeCCCCcEE
Q 036391 325 VWFDLETNSLR 335 (389)
Q Consensus 325 ~~yd~~~~~~~ 335 (389)
..||+.+++..
T Consensus 253 ~vwd~~~~~~~ 263 (814)
T 3mkq_A 253 KIWNSSTYKVE 263 (814)
T ss_dssp EEEETTTCSEE
T ss_pred EEEECCCCcEE
Confidence 99999986644
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=89.48 E-value=12 Score=33.94 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=57.3
Q ss_pred CcEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEE-ecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCC
Q 036391 220 RSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFC-FYNLVYVDMWMMKEHAVKESWTKLISVQEPTP 296 (389)
Q Consensus 220 ~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~-~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 296 (389)
...|..+|+.+.+... +..+... ..+.-. +|...++. ...+..+.||.+.. ........+....
T Consensus 283 d~~i~i~d~~~~~~~~~~~~~~~v--------~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~----~~~~~~~~~~~h~- 349 (401)
T 4aez_A 283 DKQIHFWNAATGARVNTVDAGSQV--------TSLIWSPHSKEIMSTHGFPDNNLSIWSYSS----SGLTKQVDIPAHD- 349 (401)
T ss_dssp TCEEEEEETTTCCEEEEEECSSCE--------EEEEECSSSSEEEEEECTTTCEEEEEEEET----TEEEEEEEEECCS-
T ss_pred CCEEEEEECCCCCEEEEEeCCCcE--------EEEEECCCCCeEEEEeecCCCcEEEEecCC----ccceeEEEecCCC-
Confidence 4578888887654432 3322211 122222 56655554 33456899999985 2345554444321
Q ss_pred CCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 297 TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 297 ~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-++++++|..++....++.+..||+.+++..
T Consensus 350 ----~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 350 ----TRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ----SCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred ----CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 12344677888888887777788999999987654
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.21 E-value=12 Score=33.76 Aligned_cols=205 Identities=13% Similarity=0.032 Sum_probs=101.9
Q ss_pred cc-eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~G-Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+| +|+....+..+.|||..++....-...+...-.........+.+.+....+ ++ ... ....+.+|+..
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~-l~-s~~--------~dg~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNV-LL-SAG--------CDNVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTE-EE-EEE--------TTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCE-EE-EEc--------CCCEEEEEECC
Confidence 44 454444677899999888754221100000000012234456666654332 22 221 23357889988
Q ss_pred CCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeee-e-CCCCccccCCCc
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-L-PLPDSVNVSYAN 248 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i-~~P~~~~~~~~~ 248 (389)
++.....-... .+. ..-.++.+ +|.....+.. ...|..+|+.+.+... + .......
T Consensus 163 ~~~~~~~~~~~----------~~~--~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~----- 222 (402)
T 2aq5_A 163 TGAAVLTLGPD----------VHP--DTIYSVDWSRDGALICTSCR---DKRVRVIEPRKGTVVAEKDRPHEGTR----- 222 (402)
T ss_dssp TTEEEEEECTT----------TCC--SCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEECSSCSSS-----
T ss_pred CCCccEEEecC----------CCC--CceEEEEECCCCCEEEEEec---CCcEEEEeCCCCceeeeeccCCCCCc-----
Confidence 87543221001 000 00112222 4554443332 3578999998765433 3 2222110
Q ss_pred eEEEEEEeCCeEEEEEe--cCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEE
Q 036391 249 VHVDVGSLEGCLCVFCF--YNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLV 325 (389)
Q Consensus 249 ~~~~l~~~~G~L~~~~~--~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~ 325 (389)
.......-+|.+.+++. .....+.+|-+.... . =.....+.... ...-++++++|..+++.. .++.+.
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~--~-~~~~~~~~~~~------~v~~~~~s~~~~~l~~~g~~dg~i~ 293 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE--E-PLSLQELDTSS------GVLLPFFDPDTNIVYLCGKGDSSIR 293 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS--S-CSEEEECCCCS------SCEEEEEETTTTEEEEEETTCSCEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc--C-CceEEeccCCC------ceeEEEEcCCCCEEEEEEcCCCeEE
Confidence 11112223677666654 334589999887532 1 11122222211 134567788888887765 366799
Q ss_pred EEeCCCCc--EEEE
Q 036391 326 WFDLETNS--LRTV 337 (389)
Q Consensus 326 ~yd~~~~~--~~~v 337 (389)
+||+.+++ ...+
T Consensus 294 i~d~~~~~~~~~~l 307 (402)
T 2aq5_A 294 YFEITSEAPFLHYL 307 (402)
T ss_dssp EEEECSSTTCEEEE
T ss_pred EEEecCCCcceEee
Confidence 99999887 6665
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.69 E-value=11 Score=32.67 Aligned_cols=109 Identities=9% Similarity=0.052 Sum_probs=59.4
Q ss_pred cEEEEEECCC-ceeee-----eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcC
Q 036391 221 SVIMAFNLVA-KEFYQ-----LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQE 293 (389)
Q Consensus 221 ~~il~fD~~~-e~~~~-----i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~ 293 (389)
..|..||+.+ .+... +..+... . ...+... +|+..++.......+.+|.++.. ...+.....+..
T Consensus 151 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~--~g~~~~~~~~~~ 222 (343)
T 1ri6_A 151 DRICLFTVSDDGHLVAQDPAEVTTVEGA-----G-PRHMVFHPNEQYAYCVNELNSSVDVWELKDP--HGNIECVQTLDM 222 (343)
T ss_dssp TEEEEEEECTTSCEEEEEEEEEECSTTC-----C-EEEEEECTTSSEEEEEETTTTEEEEEESSCT--TSCCEEEEEEEC
T ss_pred CEEEEEEecCCCceeeecccccccCCCC-----C-cceEEECCCCCEEEEEeCCCCEEEEEEecCC--CCcEEEEeeccc
Confidence 5788999887 55542 2333221 1 1123333 66644444444458999998742 234544444432
Q ss_pred CCC-CCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeCC--CCcEEEE
Q 036391 294 PTP-TRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLE--TNSLRTV 337 (389)
Q Consensus 294 ~~~-~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~~--~~~~~~v 337 (389)
... ........-++++++|+.+++.. .++.+..||++ +++.+.+
T Consensus 223 ~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 223 MPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp SCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred cCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 110 01111233477788888887665 35679999988 5666665
No 67
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=87.90 E-value=15 Score=33.07 Aligned_cols=95 Identities=9% Similarity=-0.003 Sum_probs=52.9
Q ss_pred EEEEEECCCceeeeeCCC-CccccCCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 222 VIMAFNLVAKEFYQLPLP-DSVNVSYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 222 ~il~fD~~~e~~~~i~~P-~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
.|..+|+.+..-....+. ... .. -..+.-. +|.+.+.+.. +..+.+|-++.. ..+..+....
T Consensus 241 ~i~~~d~~~~~~~~~~~~~~~~----~~-v~~~~~s~~~~~~l~s~~~-dg~v~~wd~~~~------~~~~~~~~~~--- 305 (416)
T 2pm9_A 241 SILIWDLRNANTPLQTLNQGHQ----KG-ILSLDWCHQDEHLLLSSGR-DNTVLLWNPESA------EQLSQFPARG--- 305 (416)
T ss_dssp CCCEEETTSTTSCSBCCCSCCS----SC-EEEEEECSSCSSCEEEEES-SSEEEEECSSSC------CEEEEEECSS---
T ss_pred eEEEEeCCCCCCCcEEeecCcc----Cc-eeEEEeCCCCCCeEEEEeC-CCCEEEeeCCCC------ccceeecCCC---
Confidence 688888887431111221 111 11 1233332 5666665554 448999987741 2344444221
Q ss_pred CcceeeeEEEEeCC-CEEEEEEcCcEEEEEeCCCCc
Q 036391 299 SFLFLRPLGYSRNG-VKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 299 ~~~~~~p~~~~~~g-~~i~l~~~~~~l~~yd~~~~~ 333 (389)
....-+++++++ ..++....++.+.+||+.+.+
T Consensus 306 --~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 306 --NWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp --SCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred --CceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 123456777777 566666666789999998765
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=87.89 E-value=11 Score=32.94 Aligned_cols=60 Identities=7% Similarity=0.172 Sum_probs=36.5
Q ss_pred EecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCC----CEEEEEEcCcEEEEEeCCC
Q 036391 264 CFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNG----VKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 264 ~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g----~~i~l~~~~~~l~~yd~~~ 331 (389)
....+..+.||.++. ...|.....+.... ....-+++++++ ..++-...++.+..||+++
T Consensus 184 sgs~D~~v~lWd~~~---~~~~~~~~~l~~h~-----~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 184 SGGCDNLIKLWKEEE---DGQWKEEQKLEAHS-----DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCBTTSBCCEEEECT---TSCEEEEECCBCCS-----SCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred EecCCCeEEEEEeCC---CCccceeeecccCC-----CceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 333445899999864 24576665443221 124456666664 5565566677899999876
No 69
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=87.72 E-value=12 Score=31.82 Aligned_cols=192 Identities=9% Similarity=0.013 Sum_probs=95.1
Q ss_pred EEeeecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+.-..+|.+.+.. ....++++|| +++...+..+.. .....++.+++.. ++... .. ....+.
T Consensus 104 i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~------~~~~~~i~~~~~g---~l~v~-~~-------~~~~i~ 165 (299)
T 2z2n_A 104 ITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNK------GSYPSFITLGSDN---ALWFT-EN-------QNNAIG 165 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSST------TCCEEEEEECTTS---CEEEE-ET-------TTTEEE
T ss_pred eEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCC------CCCCceEEEcCCC---CEEEE-eC-------CCCEEE
Confidence 3334467666654 3567899999 776665433221 1123456666543 22221 10 123567
Q ss_pred EEEcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccC
Q 036391 168 VYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVS 245 (389)
Q Consensus 168 Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 245 (389)
+|+. ++......... .. ....++.+ +|.+|+... ....|..||+ +.++..+.+|....
T Consensus 166 ~~~~-~g~~~~~~~~~-----------~~--~~~~~i~~~~~g~l~v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~-- 225 (299)
T 2z2n_A 166 RITE-SGDITEFKIPT-----------PA--SGPVGITKGNDDALWFVEI---IGNKIGRITT-SGEITEFKIPTPNA-- 225 (299)
T ss_dssp EECT-TCCEEEEECSS-----------TT--CCEEEEEECTTSSEEEEET---TTTEEEEECT-TCCEEEEECSSTTC--
T ss_pred EEcC-CCcEEEeeCCC-----------CC--CcceeEEECCCCCEEEEcc---CCceEEEECC-CCcEEEEECCCCCC--
Confidence 7777 66665542111 00 11123333 578766532 2357999999 77777766653221
Q ss_pred CCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEE
Q 036391 246 YANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKL 324 (389)
Q Consensus 246 ~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l 324 (389)
. -..+... +|.|++...... .+.+|-. . .. +..+.... ......-+++ ++| .+++....+.+
T Consensus 226 --~-~~~i~~~~~g~l~v~~~~~~-~i~~~d~--~---g~---~~~~~~~~---~~~~~~~i~~-~~g-~l~v~~~~~~l 288 (299)
T 2z2n_A 226 --R-PHAITAGAGIDLWFTEWGAN-KIGRLTS--N---NI---IEEYPIQI---KSAEPHGICF-DGE-TIWFAMECDKI 288 (299)
T ss_dssp --C-EEEEEECSTTCEEEEETTTT-EEEEEET--T---TE---EEEEECSS---SSCCEEEEEE-CSS-CEEEEETTTEE
T ss_pred --C-ceeEEECCCCCEEEeccCCc-eEEEECC--C---Cc---eEEEeCCC---CCCccceEEe-cCC-CEEEEecCCcE
Confidence 1 1234443 788877764322 4444433 1 11 12222211 0112334555 555 56776656789
Q ss_pred EEEeCCCCcEE
Q 036391 325 VWFDLETNSLR 335 (389)
Q Consensus 325 ~~yd~~~~~~~ 335 (389)
+.||+++++++
T Consensus 289 ~~~~~~~~~~~ 299 (299)
T 2z2n_A 289 GKLTLIKDNME 299 (299)
T ss_dssp EEEEEC-----
T ss_pred EEEEcCcccCC
Confidence 99999987653
No 70
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=87.62 E-value=16 Score=33.26 Aligned_cols=202 Identities=11% Similarity=0.082 Sum_probs=97.4
Q ss_pred EEEe-eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEE
Q 036391 88 EVLG-SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEV 166 (389)
Q Consensus 88 ~~~~-s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~ 166 (389)
.+++ |.+++|.+. .++.++|||..|++...+-.... .......+.+.+. +.| +.... ....+
T Consensus 109 ~~l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~-----~~~~V~sv~fspd-g~~--lasgs--------~Dg~v 171 (420)
T 4gga_A 109 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQ-----PGEYISSVAWIKE-GNY--LAVGT--------SSAEV 171 (420)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCS-----TTCCEEEEEECTT-SSE--EEEEE--------TTSCE
T ss_pred eeEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecC-----CCCcEEEEEECCC-CCE--EEEEE--------CCCeE
Confidence 3444 456766555 47789999999998876544332 1222445666653 333 22322 23467
Q ss_pred EEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCC
Q 036391 167 EVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSY 246 (389)
Q Consensus 167 ~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 246 (389)
.+++..+++-... +. .+. ....++..+|.+-..+. ....+..+|..........+....
T Consensus 172 ~iWd~~~~~~~~~--~~----------~h~--~~v~~~s~~~~~l~sgs---~d~~i~~~d~~~~~~~~~~~~~h~---- 230 (420)
T 4gga_A 172 QLWDVQQQKRLRN--MT----------SHS--ARVGSLSWNSYILSSGS---RSGHIHHHDVRVAEHHVATLSGHS---- 230 (420)
T ss_dssp EEEETTTTEEEEE--EC----------CCS--SCEEEEEEETTEEEEEE---TTSEEEEEETTSSSCEEEEEECCS----
T ss_pred EEEEcCCCcEEEE--Ee----------CCC--CceEEEeeCCCEEEEEe---CCCceeEeeecccceeeEEecccc----
Confidence 8898887642211 11 000 11123445555433332 234677777765444332222211
Q ss_pred CceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCC-CEEEEEE--cCc
Q 036391 247 ANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNG-VKLLLEV--RRE 322 (389)
Q Consensus 247 ~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g-~~i~l~~--~~~ 322 (389)
.. ...+.. .+|...+.... +..+.||.+.... ..+..+....... .....+++++++ ..+.... .++
T Consensus 231 ~~-~~~~~~~~~g~~l~s~~~-D~~v~i~~~~~~~--~~~~~~~~~~~~~-----~~V~~~~~~p~~~~~la~~~gs~D~ 301 (420)
T 4gga_A 231 QE-VCGLRWAPDGRHLASGGN-DNLVNVWPSAPGE--GGWVPLQTFTQHQ-----GAVKAVAWCPWQSNVLATGGGTSDR 301 (420)
T ss_dssp SC-EEEEEECTTSSEEEEEET-TSCEEEEESSCCS--SCSCCSEEECCCS-----SCEEEEEECTTCTTEEEEEECTTTC
T ss_pred cc-eeeeeecCCCCeeeeeec-cccceEEeecccc--ccceeeeeecccC-----CceeeeeeCCCcccEEEEEeecCCC
Confidence 11 112222 25665554444 3478899876432 1221122111111 123344555533 3333332 235
Q ss_pred EEEEEeCCCCcEEE
Q 036391 323 KLVWFDLETNSLRT 336 (389)
Q Consensus 323 ~l~~yd~~~~~~~~ 336 (389)
.+..||+.+++...
T Consensus 302 ~I~iwd~~t~~~~~ 315 (420)
T 4gga_A 302 HIRIWNVCSGACLS 315 (420)
T ss_dssp EEEEEETTTTEEEE
T ss_pred EEEEEeCCccccce
Confidence 67788888776543
No 71
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.97 E-value=17 Score=32.61 Aligned_cols=117 Identities=13% Similarity=0.100 Sum_probs=66.1
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEECCCce--eeeeCCCCccc---cCCCceEEEEEEeCCeEEEEEecCCCeEEEEE
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNLVAKE--FYQLPLPDSVN---VSYANVHVDVGSLEGCLCVFCFYNLVYVDMWM 275 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~--~~~i~~P~~~~---~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~ 275 (389)
..++..+|.+|..... ..|.+||..+.+ |+. +++.... .........+...+|.|++..... . |..
T Consensus 47 ~~p~v~~~~v~~~~~~----g~v~a~d~~tG~~~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g--~--l~a 117 (376)
T 3q7m_A 47 LHPALADNVVYAADRA----GLVKALNADDGKEIWSV-SLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKA--Q--VYA 117 (376)
T ss_dssp CCCEEETTEEEEECTT----SEEEEEETTTCCEEEEE-ECCC---CCSCCCCCEEEEEEEETTEEEEEETTS--E--EEE
T ss_pred eccEEECCEEEEEcCC----CeEEEEEccCCceeeee-cCccccccccccCcccccCceEeCCEEEEEcCCC--E--EEE
Confidence 4678899999986432 589999997654 443 3322110 001122345667788888765432 2 444
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 276 MKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 276 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
++-...+..|... +.... ...|+. . ++.|++...++.++.+|.++++..+-
T Consensus 118 ~d~~tG~~~W~~~--~~~~~------~~~p~~-~--~~~v~v~~~~g~l~~~d~~tG~~~W~ 168 (376)
T 3q7m_A 118 LNTSDGTVAWQTK--VAGEA------LSRPVV-S--DGLVLIHTSNGQLQALNEADGAVKWT 168 (376)
T ss_dssp EETTTCCEEEEEE--CSSCC------CSCCEE-E--TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred EECCCCCEEEEEe--CCCce------EcCCEE-E--CCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 4432224567442 12111 123332 2 45777777777899999999886544
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=86.79 E-value=15 Score=32.06 Aligned_cols=202 Identities=9% Similarity=0.025 Sum_probs=101.1
Q ss_pred cceEEEee-CCceEEEEcCCcccccc-cCCCCCCC-CCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 94 NGLIALCN-SVQELALFNPSTRKLKT-LPLPPCFV-GFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 94 ~GLl~l~~-~~~~~~V~NP~T~~~~~-LP~~~~~~-~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
+..+.+.. ....+.++|+.|++... ++...... .........++.+++..+. ++ +.... ....+.+|+
T Consensus 100 g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~--l~-~~~~~------~~~~i~~~d 170 (353)
T 3vgz_A 100 TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNT--VY-ISGIG------KESVIWVVD 170 (353)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTE--EE-EEEES------SSCEEEEEE
T ss_pred CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCE--EE-EEecC------CCceEEEEc
Confidence 34444443 35689999999987633 33321100 0011223455777775442 22 22111 234678888
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCce
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANV 249 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~ 249 (389)
..++.=...-... ......-.+.-+|...+.+.. ...|..+|+.+.+... ++.+.... ...
T Consensus 171 ~~~~~~~~~~~~~------------~~~~~~~~~s~dg~~l~~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~---~~~ 232 (353)
T 3vgz_A 171 GGNIKLKTAIQNT------------GKMSTGLALDSEGKRLYTTNA---DGELITIDTADNKILSRKKLLDDGK---EHF 232 (353)
T ss_dssp TTTTEEEEEECCC------------CTTCCCCEEETTTTEEEEECT---TSEEEEEETTTTEEEEEEECCCSSS---CCC
T ss_pred CCCCceEEEecCC------------CCccceEEECCCCCEEEEEcC---CCeEEEEECCCCeEEEEEEcCCCCC---Ccc
Confidence 8776422111101 000111122335553333322 3578899998876543 45433211 111
Q ss_pred EEEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEE
Q 036391 250 HVDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVW 326 (389)
Q Consensus 250 ~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~ 326 (389)
...+... +|+ |++.. .....+.+|-++. ...+..+.... ..-++++++|+.+++... ++.+..
T Consensus 233 ~~~~~~s~dg~~l~~~~-~~~~~v~~~d~~~------~~~~~~~~~~~-------~~~~~~s~dg~~l~v~~~~~~~v~~ 298 (353)
T 3vgz_A 233 FINISLDTARQRAFITD-SKAAEVLVVDTRN------GNILAKVAAPE-------SLAVLFNPARNEAYVTHRQAGKVSV 298 (353)
T ss_dssp EEEEEEETTTTEEEEEE-SSSSEEEEEETTT------CCEEEEEECSS-------CCCEEEETTTTEEEEEETTTTEEEE
T ss_pred cceEEECCCCCEEEEEe-CCCCEEEEEECCC------CcEEEEEEcCC-------CceEEECCCCCEEEEEECCCCeEEE
Confidence 1223333 555 54444 3334777776543 12333444322 123677889988777753 568999
Q ss_pred EeCCCCcEEE
Q 036391 327 FDLETNSLRT 336 (389)
Q Consensus 327 yd~~~~~~~~ 336 (389)
||+++++...
T Consensus 299 ~d~~~~~~~~ 308 (353)
T 3vgz_A 299 IDAKSYKVVK 308 (353)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9999887654
No 73
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=86.75 E-value=16 Score=32.20 Aligned_cols=142 Identities=13% Similarity=0.075 Sum_probs=76.7
Q ss_pred eeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeee-CCCCc
Q 036391 163 EVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQL-PLPDS 241 (389)
Q Consensus 163 ~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i-~~P~~ 241 (389)
...+.+|+..++.|+.+..+.. +......-...-+|.+...+.. ...|..+|+.+.++... .+...
T Consensus 29 d~~v~i~~~~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~ 95 (372)
T 1k8k_C 29 NHEVHIYEKSGNKWVQVHELKE----------HNGQVTGVDWAPDSNRIVTCGT---DRNAYVWTLKGRTWKPTLVILRI 95 (372)
T ss_dssp SSEEEEEEEETTEEEEEEEEEC----------CSSCEEEEEEETTTTEEEEEET---TSCEEEEEEETTEEEEEEECCCC
T ss_pred CCEEEEEeCCCCcEEeeeeecC----------CCCcccEEEEeCCCCEEEEEcC---CCeEEEEECCCCeeeeeEEeecC
Confidence 3478899998887765543321 1000000011124544433332 24688889887765443 22222
Q ss_pred cccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc
Q 036391 242 VNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 320 (389)
Q Consensus 242 ~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~ 320 (389)
. ... ..+.-. +|...+++.. +..+.+|.++. ...|.....+.... .....-+.+++++..++....
T Consensus 96 ~----~~v-~~~~~~~~~~~l~~~~~-d~~v~i~d~~~---~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 96 N----RAA-RCVRWAPNEKKFAVGSG-SRVISICYFEQ---ENDWWVCKHIKKPI----RSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp S----SCE-EEEEECTTSSEEEEEET-TSSEEEEEEET---TTTEEEEEEECTTC----CSCEEEEEECTTSSEEEEEET
T ss_pred C----Cce-eEEEECCCCCEEEEEeC-CCEEEEEEecC---CCcceeeeeeeccc----CCCeeEEEEcCCCCEEEEEcC
Confidence 1 111 123333 5665555544 34899999986 23455544443221 112455677788888877777
Q ss_pred CcEEEEEeCC
Q 036391 321 REKLVWFDLE 330 (389)
Q Consensus 321 ~~~l~~yd~~ 330 (389)
++.+..||++
T Consensus 163 dg~i~~~d~~ 172 (372)
T 1k8k_C 163 DFKCRIFSAY 172 (372)
T ss_dssp TSCEEEEECC
T ss_pred CCCEEEEEcc
Confidence 7789999964
No 74
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=86.42 E-value=16 Score=31.94 Aligned_cols=33 Identities=6% Similarity=0.106 Sum_probs=25.2
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
..-++++++|..++....++.+.+||+++++..
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 445677788888777777778999999987654
No 75
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.69 E-value=19 Score=32.08 Aligned_cols=202 Identities=9% Similarity=0.033 Sum_probs=94.5
Q ss_pred EEEeeCCceEEEEcCCcccccccCCCCC------CCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 97 IALCNSVQELALFNPSTRKLKTLPLPPC------FVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~LP~~~~------~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
|+....++.+.|||..+++......... ............+.+.+....+-+.. . ....+.+|+
T Consensus 59 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~--~--------~d~~i~iwd 128 (408)
T 4a11_B 59 MLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS--S--------FDKTLKVWD 128 (408)
T ss_dssp EEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE--E--------TTSEEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE--e--------CCCeEEEee
Confidence 3333356678888888766544322100 00001223345566666444332221 1 234688888
Q ss_pred cCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCce
Q 036391 171 LKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANV 249 (389)
Q Consensus 171 s~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~ 249 (389)
..++.-...-..+... .... ..+..-+|.+...+.. ...|..+|+.+..... +.... ...
T Consensus 129 ~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~---~~~v~~~d~~~~~~~~~~~~~~------~~v 189 (408)
T 4a11_B 129 TNTLQTADVFNFEETV-------YSHH---MSPVSTKHCLVAVGTR---GPKVQLCDLKSGSCSHILQGHR------QEI 189 (408)
T ss_dssp TTTTEEEEEEECSSCE-------EEEE---ECSSCSSCCEEEEEES---SSSEEEEESSSSCCCEEECCCC------SCE
T ss_pred CCCCccceeccCCCce-------eeeE---eecCCCCCcEEEEEcC---CCeEEEEeCCCcceeeeecCCC------CcE
Confidence 8876543322211000 0000 0001112333333322 2468888887654322 22211 111
Q ss_pred EEEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcC----------CCCCCCcceeeeEEEEeCCCEEEE
Q 036391 250 HVDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQE----------PTPTRSFLFLRPLGYSRNGVKLLL 317 (389)
Q Consensus 250 ~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~----------~~~~~~~~~~~p~~~~~~g~~i~l 317 (389)
..+... +|. +.+++.. +..+.+|-+.... ... ..+.. ...........-++++++|..++.
T Consensus 190 -~~~~~~~~~~~ll~~~~~-dg~i~i~d~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 190 -LAVSWSPRYDYILATASA-DSRVKLWDVRRAS--GCL---ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp -EEEEECSSCTTEEEEEET-TSCEEEEETTCSS--CCS---EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred -EEEEECCCCCcEEEEEcC-CCcEEEEECCCCC--ccc---ccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 123333 444 4444443 4489999886532 111 11110 000111123455677788888888
Q ss_pred EEcCcEEEEEeCCCCcE
Q 036391 318 EVRREKLVWFDLETNSL 334 (389)
Q Consensus 318 ~~~~~~l~~yd~~~~~~ 334 (389)
...++.+.+||+++++.
T Consensus 263 ~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp EETTSCEEEEETTTCCB
T ss_pred ecCCCeEEEEECCCCcc
Confidence 77777899999988654
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=85.45 E-value=20 Score=32.00 Aligned_cols=101 Identities=9% Similarity=-0.020 Sum_probs=51.9
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
..|..+|+.+.......................... ++.+.+.. . ...+.+|-+.. ...+..+....
T Consensus 267 g~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~i~v~d~~~------~~~~~~~~~~~---- 334 (408)
T 4a11_B 267 NRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVP-Y-GSTIAVYTVYS------GEQITMLKGHY---- 334 (408)
T ss_dssp SCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEE-E-TTEEEEEETTT------CCEEEEECCCS----
T ss_pred CeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEe-c-CCEEEEEECcC------CcceeeeccCC----
Confidence 468899988765433211111000011111112222 23333332 2 33788888764 12344443221
Q ss_pred cceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 300 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 300 ~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
....-++++++|..++....++.+..||+++.+.
T Consensus 335 -~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 335 -KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp -SCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred -CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 1245578888988888777777899999998764
No 77
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=84.87 E-value=28 Score=33.22 Aligned_cols=72 Identities=13% Similarity=0.057 Sum_probs=43.1
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeC-CCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRN-GVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~-g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
+|...++....+..+.+|.++. ...+..+....- ......-++++++ |+.++....++.+.+||+++++..
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~------~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPP------FKFSASDRTHHK--QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTT------BEEEEEECSSSC--TTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred CCCcEEEEEeCCCcEEEEeCCC------cceeeeecccCC--CCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 5542333333445899997553 344454443211 0002455677788 888887777778999999887654
Q ss_pred E
Q 036391 336 T 336 (389)
Q Consensus 336 ~ 336 (389)
.
T Consensus 243 ~ 243 (615)
T 1pgu_A 243 K 243 (615)
T ss_dssp E
T ss_pred E
Confidence 3
No 78
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=84.85 E-value=19 Score=31.40 Aligned_cols=148 Identities=11% Similarity=-0.017 Sum_probs=78.3
Q ss_pred eeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCe-EEEEccCCCCCcEEEEEECCCcee-eeeCCCC
Q 036391 163 EVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPD 240 (389)
Q Consensus 163 ~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~ 240 (389)
...+.+++..+++-...-... . ....-.+.-+|. +|.... ....|..+|+.+.+. ..++.+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~~~------------~-~~~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~~~~~ 131 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIHND------------L-KPFGATINNTTQTLWFGNT---VNSAVTAIDAKTGEVKGRLVLDD 131 (353)
T ss_dssp SEEEEEECTTTCCEEEEEEES------------S-CCCSEEEETTTTEEEEEET---TTTEEEEEETTTCCEEEEEESCC
T ss_pred CccEEEEcCCCCeEEEEEecC------------C-CcceEEECCCCCEEEEEec---CCCEEEEEeCCCCeeEEEEecCC
Confidence 456788888776533221111 0 011122334566 554433 235899999987664 4456543
Q ss_pred ccccC-CCceE-EEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEE
Q 036391 241 SVNVS-YANVH-VDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLL 316 (389)
Q Consensus 241 ~~~~~-~~~~~-~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~ 316 (389)
..... ..... ..+... +|+ |++........+.+|-++. ...+..+..... ....++++++|+.++
T Consensus 132 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~------~~~~~~~~~~~~-----~~~~~~~s~dg~~l~ 200 (353)
T 3vgz_A 132 RKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN------IKLKTAIQNTGK-----MSTGLALDSEGKRLY 200 (353)
T ss_dssp CCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT------TEEEEEECCCCT-----TCCCCEEETTTTEEE
T ss_pred CccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC------CceEEEecCCCC-----ccceEEECCCCCEEE
Confidence 22100 00111 123333 555 5555544344566664432 334455552111 134467788999888
Q ss_pred EEEcCcEEEEEeCCCCcEEEE
Q 036391 317 LEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 317 l~~~~~~l~~yd~~~~~~~~v 337 (389)
+...++.+..||+++++....
T Consensus 201 ~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 201 TTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EECTTSEEEEEETTTTEEEEE
T ss_pred EEcCCCeEEEEECCCCeEEEE
Confidence 877677899999999876543
No 79
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.80 E-value=24 Score=32.37 Aligned_cols=187 Identities=12% Similarity=0.095 Sum_probs=98.0
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
..+.+||..++..+.|..... ....+.+.|... +++... .. .....+.+++..++..+.+...+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~--------~v~~~~~Spdg~--~la~~s-~~-----~~~~~i~~~d~~tg~~~~l~~~~ 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ--------PLMSPAWSPDGS--KLAYVT-FE-----SGRSALVIQTLANGAVRQVASFP 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS--------CEEEEEECTTSS--EEEEEE-CT-----TSSCEEEEEETTTCCEEEEECCS
T ss_pred ceEEEEcCCCCCCEEEeCCCC--------cceeeEEcCCCC--EEEEEE-ec-----CCCcEEEEEECCCCcEEEeecCC
Confidence 689999987766555543221 234455665432 222222 11 12357889999988776654333
Q ss_pred cccccccccccccccccCceeeECCe-EEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE-eCCeEE
Q 036391 184 RFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-LEGCLC 261 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~ 261 (389)
.. .......-+|. +.+.... .....|..+|+.+.+...+...... ...+.- -+|+..
T Consensus 223 ~~-------------~~~~~~spdg~~la~~~~~-~g~~~i~~~d~~~~~~~~l~~~~~~-------~~~~~~spdg~~l 281 (415)
T 2hqs_A 223 RH-------------NGAPAFSPDGSKLAFALSK-TGSLNLYVMDLASGQIRQVTDGRSN-------NTEPTWFPDSQNL 281 (415)
T ss_dssp SC-------------EEEEEECTTSSEEEEEECT-TSSCEEEEEETTTCCEEECCCCSSC-------EEEEEECTTSSEE
T ss_pred Cc-------------ccCEEEcCCCCEEEEEEec-CCCceEEEEECCCCCEEeCcCCCCc-------ccceEECCCCCEE
Confidence 10 00111122565 4444332 2335689999988776554322111 112222 267654
Q ss_pred EEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC---cEEEEEeCCCCcEEEE
Q 036391 262 VFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR---EKLVWFDLETNSLRTV 337 (389)
Q Consensus 262 ~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~---~~l~~yd~~~~~~~~v 337 (389)
++.........||.++-.+ .. ...+... .....-+.++++|+.|++.... ..++.+|+++++.+.+
T Consensus 282 ~~~s~~~g~~~i~~~d~~~--~~---~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 282 AFTSDQAGRPQVYKVNING--GA---PQRITWE-----GSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 350 (415)
T ss_dssp EEEECTTSSCEEEEEETTS--SC---CEECCCS-----SSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEEC
T ss_pred EEEECCCCCcEEEEEECCC--CC---EEEEecC-----CCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEe
Confidence 4444433355677776422 11 1112111 1123346777899988876542 4799999999988655
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=84.59 E-value=2.4 Score=38.05 Aligned_cols=140 Identities=12% Similarity=0.051 Sum_probs=67.6
Q ss_pred eEEEEEEcCCCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCce-eeee-CCC
Q 036391 164 VEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKE-FYQL-PLP 239 (389)
Q Consensus 164 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i-~~P 239 (389)
..+.+|+..++.|+.+..+.. +.. .-.++. -+|.+...+.. ...|..+|+.+.. +... .+.
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~----------h~~--~v~~~~~s~~~~~l~s~s~---d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSD----------HDK--IVTCVDWAPKSNRIVTCSQ---DRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCC----------CSS--CEEEEEECTTTCCEEEEET---TSSEEEC------CCCCEEECC
T ss_pred CEEEEEEccCCceEEEEEEec----------CCc--eEEEEEEeCCCCEEEEEeC---CCeEEEEEcCCCCceeeeeEec
Confidence 356788888888877655441 110 001121 13433222221 2458888888766 3332 221
Q ss_pred CccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEE
Q 036391 240 DSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLE 318 (389)
Q Consensus 240 ~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~ 318 (389)
... ... ..+.-. +|.+.+++.. +..+.+|.++.. ..|.....+.... .....-++++++|..++..
T Consensus 98 ~~~----~~v-~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~---~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 98 RLN----RAA-TFVRWSPNEDKFAVGSG-ARVISVCYFEQE---NDWWVSKHLKRPL----RSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp CCS----SCE-EEEECCTTSSCCEEEES-SSCEEECCC--------CCCCEEECSSC----CSCEEEEEECTTSSEEEEE
T ss_pred ccC----Cce-EEEEECCCCCEEEEEec-CCeEEEEEECCc---ccceeeeEeeccc----CCCeEEEEEcCCCCEEEEE
Confidence 111 111 122222 5665555544 348999988752 3455455554311 1124556777888888777
Q ss_pred EcCcEEEEEeCCC
Q 036391 319 VRREKLVWFDLET 331 (389)
Q Consensus 319 ~~~~~l~~yd~~~ 331 (389)
..++.+..||+++
T Consensus 165 ~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 165 CADRKAYVLSAYV 177 (377)
T ss_dssp ESSSCEEEEEECC
T ss_pred eCCCEEEEEEEEe
Confidence 7777799999864
No 81
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=84.34 E-value=17 Score=33.26 Aligned_cols=118 Identities=13% Similarity=0.076 Sum_probs=68.6
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeee---CC-C-----CccccCCCceE-EEEEEeCCeEEEEEecC------CC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQL---PL-P-----DSVNVSYANVH-VDVGSLEGCLCVFCFYN------LV 269 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i---~~-P-----~~~~~~~~~~~-~~l~~~~G~L~~~~~~~------~~ 269 (389)
.+|.++|.+.. ..+.++|+.++.-..+ .+ . .... -...+ ..+..-+++||+....+ ..
T Consensus 236 ~dG~~~~vs~~----g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~--p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~ 309 (386)
T 3sjl_D 236 KAGRLVWPTYT----GKIHQIDLSSGDAKFLPAVEALTEAERADGWR--PGGWQQVAYHRALDRIYLLVDQRDEWRHKTA 309 (386)
T ss_dssp TTTEEEEEBTT----SEEEEEECTTSSCEECCCEESSCHHHHHTTEE--ECSSSCEEEETTTTEEEEEEEECCTTCTTSC
T ss_pred CCCcEEEEeCC----CEEEEEECCCCcceeecceecccccccccccc--CCCcceeeECCCCCeEEEEeccccccccCCC
Confidence 37888887653 4699999987653322 10 0 0100 00111 12222366777765321 22
Q ss_pred eEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCC-EEEEEEc-CcEEEEEeCCCCcEE-EEEE
Q 036391 270 YVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVR-REKLVWFDLETNSLR-TVKI 339 (389)
Q Consensus 270 ~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~~-~~~l~~yd~~~~~~~-~v~~ 339 (389)
.=.||+++- ..+..+.+|.... ...-+++++||. .+|.... ++.+.+||..+++.. .+..
T Consensus 310 ~~~V~viD~----~t~kv~~~i~vg~------~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~ 372 (386)
T 3sjl_D 310 SRFVVVLDA----KTGERLAKFEMGH------EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 372 (386)
T ss_dssp EEEEEEEET----TTCCEEEEEEEEE------EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECC
T ss_pred CCEEEEEEC----CCCeEEEEEECCC------CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecC
Confidence 467999985 4566777777542 234578888886 5555333 567999999998753 4443
No 82
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=83.23 E-value=26 Score=31.58 Aligned_cols=101 Identities=11% Similarity=0.110 Sum_probs=53.4
Q ss_pred cEEEEEECCCcee--eeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCC-CCC
Q 036391 221 SVIMAFNLVAKEF--YQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEP-TPT 297 (389)
Q Consensus 221 ~~il~fD~~~e~~--~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~ 297 (389)
..|..+|+.+... ..+..... .. -..+...+|.+.+.+ ..+..+.+|.+...+.... +..+... ...
T Consensus 313 g~i~vwd~~~~~~~~~~~~~~~~-----~~-v~~~~~~~~~~l~s~-~~d~~v~iw~~~~~~~~~~---~~~~~~~~~~~ 382 (420)
T 3vl1_A 313 GMLAQWDLRSPECPVGEFLINEG-----TP-INNVYFAAGALFVSS-GFDTSIKLDIISDPESERP---AIEFETPTFLV 382 (420)
T ss_dssp SEEEEEETTCTTSCSEEEEESTT-----SC-EEEEEEETTEEEEEE-TTTEEEEEEEECCTTCCSC---EECTTSCEEEC
T ss_pred CeEEEEEcCCCcCchhhhhccCC-----CC-ceEEEeCCCCEEEEe-cCCccEEEEeccCCCCCcc---ceeccCccEEc
Confidence 5788999987532 23322111 11 123344577755544 4445899999986331111 1111100 000
Q ss_pred CCcceeeeEEEEeCCC---EEEEEEcCcEEEEEeCCC
Q 036391 298 RSFLFLRPLGYSRNGV---KLLLEVRREKLVWFDLET 331 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~---~i~l~~~~~~l~~yd~~~ 331 (389)
.......-+++.++|. .++.....+.+..|+++.
T Consensus 383 ~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 383 SNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSN 419 (420)
T ss_dssp CSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC
T ss_pred cCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccC
Confidence 1111244577788777 666666667788899865
No 83
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=83.14 E-value=24 Score=31.09 Aligned_cols=95 Identities=11% Similarity=0.099 Sum_probs=56.0
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +.... ... ..+... +|.+.+.+.. +..+.+|-+... .....+....
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~------~~v-~~~~~~~~~~~l~sg~~-d~~v~~wd~~~~------~~~~~~~~h~--- 226 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHT------GDV-MSLSLAPDTRLFVSGAC-DASAKLWDVREG------MCRQTFTGHE--- 226 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS------SCE-EEEEECTTSSEEEEEET-TSCEEEEETTTC------SEEEEECCCS---
T ss_pred CcEEEEECCCCcEEEEEcCCC------Cce-EEEEECCCCCEEEEEeC-CCcEEEEECCCC------eeEEEEcCCc---
Confidence 468889988765433 22211 111 123333 6666555544 448999987641 1233333211
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
....-++++++|..++....++.+..||+++++.
T Consensus 227 --~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~ 260 (340)
T 1got_B 227 --SDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260 (340)
T ss_dssp --SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred --CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 1245577888888888777777899999988654
No 84
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=82.88 E-value=23 Score=30.68 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=66.0
Q ss_pred CCe-EEEEccCCCCCcEEEEEECCC--ceee---ee-CCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEee
Q 036391 207 GGA-LHWVSPKSSTRSVIMAFNLVA--KEFY---QL-PLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKE 278 (389)
Q Consensus 207 ~G~-lywl~~~~~~~~~il~fD~~~--e~~~---~i-~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~ 278 (389)
+|. +|.... ....|..+|+.. .++. .+ .+|.... .......+... +|+..++.......+.+|.++.
T Consensus 188 dg~~l~~~~~---~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 188 NEQYAYCVNE---LNSSVDVWELKDPHGNIECVQTLDMMPENFS--DTRWAADIHITPDGRHLYACDRTASLITVFSVSE 262 (343)
T ss_dssp TSSEEEEEET---TTTEEEEEESSCTTSCCEEEEEEECSCTTCC--SCCCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEEeC---CCCEEEEEEecCCCCcEEEEeeccccCcccc--ccCCccceEECCCCCEEEEEecCCCEEEEEEEcC
Confidence 465 444432 235788888843 4332 22 2443321 01111123333 5654444444455899999985
Q ss_pred CCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEE--eCCCCcEEEE
Q 036391 279 HAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWF--DLETNSLRTV 337 (389)
Q Consensus 279 ~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~y--d~~~~~~~~v 337 (389)
.+ ..+..+..+.... ...-++++++|..++.... ++.+.+| |.++++++.+
T Consensus 263 ~~--~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~ 316 (343)
T 1ri6_A 263 DG--SVLSKEGFQPTET------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEK 316 (343)
T ss_dssp TS--CCEEEEEEEECSS------SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEE
T ss_pred CC--CceEEeeeecCCC------ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEc
Confidence 22 3566666665432 1344677888888887753 4566666 8888888877
No 85
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=82.68 E-value=23 Score=30.53 Aligned_cols=190 Identities=9% Similarity=0.083 Sum_probs=97.5
Q ss_pred cc-eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~G-Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+| +++....+..+.+||..+++......... .......+.+.+.. .+ +.... ....+.+|+..
T Consensus 108 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~-~~--l~~~~--------~dg~v~~~d~~ 171 (337)
T 1gxr_A 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-----SAPACYALAISPDS-KV--CFSCC--------SDGNIAVWDLH 171 (337)
T ss_dssp TSSEEEEEESSSEEEEEECCCC--EEEEEEEC-----SSSCEEEEEECTTS-SE--EEEEE--------TTSCEEEEETT
T ss_pred CCCEEEEEcCCCcEEEEECCCCCcceeeeccc-----CCCceEEEEECCCC-CE--EEEEe--------CCCcEEEEeCC
Confidence 44 44444456789999998876333222111 11123445555532 22 22221 22357888888
Q ss_pred CCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCce
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANV 249 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~ 249 (389)
++.-...-... . ..-.++.+ +|.....+.. ...|..+|+.+.+... +..+...
T Consensus 172 ~~~~~~~~~~~------------~--~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~~~~~v------- 227 (337)
T 1gxr_A 172 NQTLVRQFQGH------------T--DGASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHDFTSQI------- 227 (337)
T ss_dssp TTEEEEEECCC------------S--SCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEECSSCE-------
T ss_pred CCceeeeeecc------------c--CceEEEEECCCCCEEEEEec---CCcEEEEECCCCceEeeecCCCce-------
Confidence 76533221100 0 00111222 4544444332 3578899988765433 3332221
Q ss_pred EEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEe
Q 036391 250 HVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 328 (389)
Q Consensus 250 ~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd 328 (389)
..+.. -+|.+.++... ...+.+|.+... +. ..+... .....-+.+.++|..++....++.+..||
T Consensus 228 -~~~~~s~~~~~l~~~~~-~~~i~~~~~~~~---~~----~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 228 -FSLGYCPTGEWLAVGME-SSNVEVLHVNKP---DK----YQLHLH-----ESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp -EEEEECTTSSEEEEEET-TSCEEEEETTSS---CE----EEECCC-----SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred -EEEEECCCCCEEEEEcC-CCcEEEEECCCC---Ce----EEEcCC-----ccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 12333 25665555544 347889988752 11 122211 11245567778888888777778899999
Q ss_pred CCCCcEEEE
Q 036391 329 LETNSLRTV 337 (389)
Q Consensus 329 ~~~~~~~~v 337 (389)
+++++....
T Consensus 294 ~~~~~~~~~ 302 (337)
T 1gxr_A 294 TPYGASIFQ 302 (337)
T ss_dssp TTTCCEEEE
T ss_pred CCCCeEEEE
Confidence 999876633
No 86
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.32 E-value=25 Score=30.72 Aligned_cols=70 Identities=9% Similarity=0.054 Sum_probs=44.2
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
+|.+.+++.. ...+.+|-+... ...+..+.... ....-++++++|..++....++.+.+||+++++...
T Consensus 186 ~~~~l~~~~~-dg~i~i~d~~~~-----~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 186 KGKYIIAGHK-DGKISKYDVSNN-----YEYVDSIDLHE-----KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp GGCEEEEEET-TSEEEEEETTTT-----TEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEcC-CCEEEEEECCCC-----cEeEEEEecCC-----CceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 5555554443 348899987641 23344444321 124456777888888887777889999999877554
Q ss_pred E
Q 036391 337 V 337 (389)
Q Consensus 337 v 337 (389)
.
T Consensus 255 ~ 255 (369)
T 3zwl_B 255 K 255 (369)
T ss_dssp E
T ss_pred e
Confidence 3
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=82.22 E-value=27 Score=31.17 Aligned_cols=194 Identities=6% Similarity=-0.018 Sum_probs=95.3
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
+.+|.++....++.+.+||..+++....-... ......+.+.+... .+.... ....+.+|+.
T Consensus 215 ~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~-------~~~i~~~~~~~~~~---~l~~~~--------~d~~i~i~d~ 276 (425)
T 1r5m_A 215 VDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH-------HGPISVLEFNDTNK---LLLSAS--------DDGTLRIWHG 276 (425)
T ss_dssp EETTEEEEECGGGCEEEEETTCSSCSEEECCC-------SSCEEEEEEETTTT---EEEEEE--------TTSCEEEECS
T ss_pred cCCCEEEEEcCCCeEEEEEcCCCceeeeeccC-------CCceEEEEECCCCC---EEEEEc--------CCCEEEEEEC
Confidence 34566666666778999999887544322111 12234566666433 222221 2235778887
Q ss_pred CCCcEEE-cccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCce
Q 036391 172 KINSWRR-ISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANV 249 (389)
Q Consensus 172 ~~~~W~~-~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~ 249 (389)
.++.-.. ..... .....-...-+| ....+. ....|..+|+.+.+... +..... ..
T Consensus 277 ~~~~~~~~~~~~~-------------~~i~~~~~~~~~-~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~------~i 333 (425)
T 1r5m_A 277 GNGNSQNCFYGHS-------------QSIVSASWVGDD-KVISCS---MDGSVRLWSLKQNTLLALSIVDGV------PI 333 (425)
T ss_dssp SSBSCSEEECCCS-------------SCEEEEEEETTT-EEEEEE---TTSEEEEEETTTTEEEEEEECTTC------CE
T ss_pred CCCccceEecCCC-------------ccEEEEEECCCC-EEEEEe---CCCcEEEEECCCCcEeEecccCCc------cE
Confidence 7643211 11001 000000111245 222222 23578999997765433 232211 11
Q ss_pred EEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCC---------CCCe-----EEEEEEcCCCCCCCcceeeeEEEEeCCCE
Q 036391 250 HVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAV---------KESW-----TKLISVQEPTPTRSFLFLRPLGYSRNGVK 314 (389)
Q Consensus 250 ~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~---------~~~W-----~~~~~i~~~~~~~~~~~~~p~~~~~~g~~ 314 (389)
..+... +|.+.+++.. +..+.||.++.... ...| ..+..+..... .....-+.++++|..
T Consensus 334 -~~~~~s~~~~~l~~~~~-dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 334 -FAGRISQDGQKYAVAFM-DGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQD---NDYIFDLSWNCAGNK 408 (425)
T ss_dssp -EEEEECTTSSEEEEEET-TSCEEEEECHHHHC--------------CEECCEEEEECCTTC---CCCEEEEEECTTSSE
T ss_pred -EEEEEcCCCCEEEEEEC-CCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCccc---CCceEEEEccCCCce
Confidence 122222 5665555544 34899998875320 0011 13333332210 002455677788888
Q ss_pred EEEEEcCcEEEEEeCCC
Q 036391 315 LLLEVRREKLVWFDLET 331 (389)
Q Consensus 315 i~l~~~~~~l~~yd~~~ 331 (389)
++....++.+.+||++.
T Consensus 409 l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 409 ISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp EEEEESSSCCEEEECCC
T ss_pred EEEEecCceEEEEeecC
Confidence 87777777799999863
No 88
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=81.64 E-value=27 Score=30.77 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=57.3
Q ss_pred cEEEEEECCCceeeee-CCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..+..+|..++.+..+ .+.... ... ..+.-. +|.+.+.+.. +..+.||.+... ..+..+..+....
T Consensus 83 ~~v~iw~~~~~~~~~~~~~~~h~----~~v-~~v~~sp~~~~l~s~s~-D~~v~iwd~~~~---~~~~~~~~~~~h~--- 150 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTLEGHE----NEV-KSVAWAPSGNLLATCSR-DKSVWVWEVDEE---DEYECVSVLNSHT--- 150 (345)
T ss_dssp SCEEEEEECCC-EEEEEEECCCS----SCE-EEEEECTTSSEEEEEET-TSCEEEEEECTT---SCEEEEEEECCCC---
T ss_pred CcEEEEEccCCCeEEEEEccCCC----CCc-eEEEEeCCCCEEEEEEC-CCeEEEEECCCC---CCeEEEEEecCcC---
Confidence 3566777776655432 222211 111 123333 6666555544 448999999852 3454444443221
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
....-++++++|..++....++.+..||.+++++..
T Consensus 151 --~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 151 --QDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp --SCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEE
T ss_pred --CCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEE
Confidence 124456777788877777667778888888776553
No 89
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=80.78 E-value=24 Score=29.50 Aligned_cols=188 Identities=10% Similarity=0.041 Sum_probs=93.8
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
..+|-+.+......++++||.++....++.... ....++.+++.. +++.. .. ....+.+|+.
T Consensus 75 ~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~-------~~p~~i~~~~~g---~l~v~-~~-------~~~~i~~~~~ 136 (270)
T 1rwi_B 75 DGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGL-------NYPEGLAVDTQG---AVYVA-DR-------GNNRVVKLAA 136 (270)
T ss_dssp CTTCCEEEEETTTEEEEECTTCSCCEECCCCSC-------SSEEEEEECTTC---CEEEE-EG-------GGTEEEEECT
T ss_pred CCCCCEEEEcCCCEEEEEeCCCceEeeeecCCc-------CCCcceEECCCC---CEEEE-EC-------CCCEEEEEEC
Confidence 345655555446689999998877665543321 123466677643 23322 11 2235666765
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCce
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANV 249 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 249 (389)
++.......... . ....++.+ +|.+|+.... ...|..||..+............ .
T Consensus 137 ~~~~~~~~~~~~------------~--~~p~~i~~~~~g~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~----~-- 193 (270)
T 1rwi_B 137 GSKTQTVLPFTG------------L--NDPDGVAVDNSGNVYVTDTD---NNRVVKLEAESNNQVVLPFTDIT----A-- 193 (270)
T ss_dssp TCCSCEECCCCS------------C--CSCCCEEECTTCCEEEEEGG---GTEEEEECTTTCCEEECCCSSCC----S--
T ss_pred CCceeEeecccc------------C--CCceeEEEeCCCCEEEEECC---CCEEEEEecCCCceEeecccCCC----C--
Confidence 554433221100 0 11123333 5887775432 35799999987665443221111 1
Q ss_pred EEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEE
Q 036391 250 HVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWF 327 (389)
Q Consensus 250 ~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~y 327 (389)
...++.. +|.|++...... .+.+|..+. ..... +.... .....-+++.++|. +++.. .++++..|
T Consensus 194 p~~i~~d~~g~l~v~~~~~~-~v~~~~~~~---~~~~~----~~~~~----~~~p~~i~~~~~g~-l~v~~~~~~~v~~~ 260 (270)
T 1rwi_B 194 PWGIAVDEAGTVYVTEHNTN-QVVKLLAGS---TTSTV----LPFTG----LNTPLAVAVDSDRT-VYVADRGNDRVVKL 260 (270)
T ss_dssp EEEEEECTTCCEEEEETTTS-CEEEECTTC---SCCEE----CCCCS----CSCEEEEEECTTCC-EEEEEGGGTEEEEE
T ss_pred ceEEEECCCCCEEEEECCCC-cEEEEcCCC---Cccee----eccCC----CCCceeEEECCCCC-EEEEECCCCEEEEE
Confidence 1234444 678877765433 455544332 11111 11111 11234456666776 55543 45679999
Q ss_pred eCCCCc
Q 036391 328 DLETNS 333 (389)
Q Consensus 328 d~~~~~ 333 (389)
++...+
T Consensus 261 ~~~~~~ 266 (270)
T 1rwi_B 261 TSLEHH 266 (270)
T ss_dssp CCCGGG
T ss_pred cCCCcc
Confidence 887654
No 90
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=79.99 E-value=31 Score=30.40 Aligned_cols=77 Identities=10% Similarity=0.043 Sum_probs=45.6
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCC--C-eEEE---EEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKE--S-WTKL---ISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDL 329 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~--~-W~~~---~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~ 329 (389)
+|+..++.......+.+|.++...... . .... ..+....- ....-++++++|..+++.. .++.+.+||+
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG----SGPRHLIFNSDGKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT----CCEEEEEECTTSSEEEEEETTTCEEEEEEE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC----CCCeEEEEcCCCCEEEEEcCCCCeEEEEEe
Confidence 777444444444589999988532100 1 2222 12222111 1234578888998887776 3567999999
Q ss_pred CCCcEEEE
Q 036391 330 ETNSLRTV 337 (389)
Q Consensus 330 ~~~~~~~v 337 (389)
++++++.+
T Consensus 241 ~~g~~~~~ 248 (361)
T 3scy_A 241 ADGMLDEI 248 (361)
T ss_dssp ETTEEEEE
T ss_pred cCCceEEe
Confidence 98887666
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=79.36 E-value=38 Score=30.96 Aligned_cols=101 Identities=7% Similarity=0.014 Sum_probs=51.9
Q ss_pred cEEEEEECCCce--eeeeCCCCccccCCCceEEEEEEe-CC-eEEEEEecCCCeEEEEEEeeCCCCCC--------eEEE
Q 036391 221 SVIMAFNLVAKE--FYQLPLPDSVNVSYANVHVDVGSL-EG-CLCVFCFYNLVYVDMWMMKEHAVKES--------WTKL 288 (389)
Q Consensus 221 ~~il~fD~~~e~--~~~i~~P~~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~l~iW~l~~~~~~~~--------W~~~ 288 (389)
..|..+|+.+.. ...+.... .. -..+.-. +| .+++++.. +..+.||-+...+.... -.++
T Consensus 300 g~v~vwd~~~~~~~~~~~~~h~------~~-v~~i~~sp~~~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 371 (430)
T 2xyi_A 300 KTVALWDLRNLKLKLHSFESHK------DE-IFQVQWSPHNETILASSGT-DRRLHVWDLSKIGEEQSTEDAEDGPPELL 371 (430)
T ss_dssp SEEEEEETTCTTSCSEEEECCS------SC-EEEEEECSSCTTEEEEEET-TSCCEEEEGGGTTCCCCHHHHHHCCTTEE
T ss_pred CeEEEEeCCCCCCCeEEeecCC------CC-EEEEEECCCCCCEEEEEeC-CCcEEEEeCCCCccccCccccccCCcceE
Confidence 578899987632 22222111 11 1123322 44 44544443 44899999886331110 1122
Q ss_pred EEEcCCCCCCCcceeeeEEEEeCCC-EEEEEEcCcEEEEEeCCCCcE
Q 036391 289 ISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 289 ~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~~~~~l~~yd~~~~~~ 334 (389)
...... .....-+.+++++. +++....++.+.+|++.++.+
T Consensus 372 ~~~~~h-----~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 372 FIHGGH-----TAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp EECCCC-----SSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred EEcCCC-----CCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 222211 11245567777777 555566677789998876544
No 92
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=79.25 E-value=21 Score=32.76 Aligned_cols=113 Identities=4% Similarity=0.046 Sum_probs=62.1
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEeCCe-EEEEEecCCCeEEEEEEeeCCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSLEGC-LCVFCFYNLVYVDMWMMKEHAVKES 284 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~-L~~~~~~~~~~l~iW~l~~~~~~~~ 284 (389)
-+|.+||... ....|..+|+.+.....+..... .. .+.+. -+|. |++...... -.||+++..+ .
T Consensus 140 ~~g~lyv~d~---~~~~I~~id~~~g~~~~~~~~~~-----~~-~ia~~-~~g~~l~~~d~~~~--~~I~~~d~~~---~ 204 (409)
T 3hrp_A 140 GNNTVLAYQR---DDPRVRLISVDDNKVTTVHPGFK-----GG-KPAVT-KDKQRVYSIGWEGT--HTVYVYMKAS---G 204 (409)
T ss_dssp STTEEEEEET---TTTEEEEEETTTTEEEEEEETCC-----BC-BCEEC-TTSSEEEEEBSSTT--CEEEEEEGGG---T
T ss_pred CCCCEEEEec---CCCcEEEEECCCCEEEEeeccCC-----CC-ceeEe-cCCCcEEEEecCCC--ceEEEEEcCC---C
Confidence 4689999854 34689999999877766532211 11 11222 2443 444443322 1677777532 3
Q ss_pred eE--EEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 285 WT--KLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 285 W~--~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
|. ....+.... .....-++++++++.|++....+.++.||++++....+
T Consensus 205 ~~~~~~g~~~~~~----~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 205 WAPTRIGQLGSTF----SGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp TCEEEEEECCTTS----CSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred ceeEEeeeccchh----cCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 33 221111111 11234467777445677765556799999998876655
No 93
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=78.72 E-value=30 Score=29.51 Aligned_cols=197 Identities=9% Similarity=-0.025 Sum_probs=101.9
Q ss_pred eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc
Q 036391 96 LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS 175 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~ 175 (389)
|+........++++||.++ ...+..+.. ...++.+++... ++.. .. ....+.+|+..+++
T Consensus 42 l~~~~~~~~~i~~~~~~~~-~~~~~~~~~--------~~~~l~~~~dg~---l~v~-~~-------~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ-LSPEMHPSH--------HQNGHCLNKQGH---LIAC-SH-------GLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC-EEEEESSCS--------SEEEEEECTTCC---EEEE-ET-------TTTEEEEECSTTCC
T ss_pred EEEEeCCCCEEEEEECCCC-eEEEECCCC--------CcceeeECCCCc---EEEE-ec-------CCCeEEEEcCCCCc
Confidence 4444445668999999998 555543221 234666776432 3222 11 22467888888888
Q ss_pred EEEcccCCcccccccccccccccccCceeeECCeEEEE----cc----------CCCCCcEEEEEECCCceeeeeCCCCc
Q 036391 176 WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWV----SP----------KSSTRSVIMAFNLVAKEFYQLPLPDS 241 (389)
Q Consensus 176 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl----~~----------~~~~~~~il~fD~~~e~~~~i~~P~~ 241 (389)
.+.+...... ........-.+.-+|.+|+. +. .......|..+|.. .+...+.-...
T Consensus 102 ~~~~~~~~~~--------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 102 WESIADSFEG--------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp EEEEECEETT--------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred EEEEeeccCC--------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 7655321100 00000111122336887663 11 00112479999987 45544421111
Q ss_pred cccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCe-EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE
Q 036391 242 VNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESW-TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV 319 (389)
Q Consensus 242 ~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~ 319 (389)
. .-.++.. +|++. +.......+.+|.++.. ... .....+.. . . ....-+++.++|. +++..
T Consensus 173 ~-------~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~---g~~~~~~~~~~~-~-~---~~p~~i~~d~~G~-l~v~~ 235 (296)
T 3e5z_A 173 K-------PNGLAFLPSGNLL-VSDTGDNATHRYCLNAR---GETEYQGVHFTV-E-P---GKTDGLRVDAGGL-IWASA 235 (296)
T ss_dssp S-------EEEEEECTTSCEE-EEETTTTEEEEEEECSS---SCEEEEEEEECC-S-S---SCCCSEEEBTTSC-EEEEE
T ss_pred C-------CccEEECCCCCEE-EEeCCCCeEEEEEECCC---CcCcCCCeEeeC-C-C---CCCCeEEECCCCC-EEEEc
Confidence 1 1123333 67766 55444447777777632 234 22222311 1 1 1123467777776 55555
Q ss_pred cCcEEEEEeCCCCcEEEEEE
Q 036391 320 RREKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 320 ~~~~l~~yd~~~~~~~~v~~ 339 (389)
...+..||++++....+..
T Consensus 236 -~~~v~~~~~~g~~~~~~~~ 254 (296)
T 3e5z_A 236 -GDGVHVLTPDGDELGRVLT 254 (296)
T ss_dssp -TTEEEEECTTSCEEEEEEC
T ss_pred -CCeEEEECCCCCEEEEEEC
Confidence 6679999999877777755
No 94
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=78.04 E-value=52 Score=31.90 Aligned_cols=197 Identities=11% Similarity=-0.015 Sum_probs=97.9
Q ss_pred ceEEEEcCCc------ccccccC-CCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC-CCc
Q 036391 104 QELALFNPST------RKLKTLP-LPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK-INS 175 (389)
Q Consensus 104 ~~~~V~NP~T------~~~~~LP-~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~-~~~ 175 (389)
..++++|..+ ++...|. .... ....+.+.|.. .+ +.+..............+.+++.. ++.
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~~~~SpDG-~~--la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR--------FVTGPRLSPDG-RQ--AVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS--------EECCCEECTTS-SE--EEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC--------cccCceECCCC-CE--EEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 4799999998 7776665 3221 11223344322 22 222221111101123578889988 574
Q ss_pred EEEcccCCcccccccccccccccccCceee-ECCeEEEEccCCCCCcEEEEEECCCceeeee-CCCCccccCCCce---E
Q 036391 176 WRRISNLPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIMAFNLVAKEFYQL-PLPDSVNVSYANV---H 250 (389)
Q Consensus 176 W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~---~ 250 (389)
+.....+.. ..........+ -+|.+|+.+.. .....|..+|+.+.++..+ +...... ...+ .
T Consensus 230 ~~~~~~l~~----------~~~~~~~~~~~spdg~l~~~~~~-~~~~~l~~~~~~~~~~~~l~~~~~~~~--~p~w~~~~ 296 (662)
T 3azo_A 230 FADTRTLLG----------GPEEAIAQAEWAPDGSLIVATDR-TGWWNLHRVDPATGAATQLCRREEEFA--GPLWTPGM 296 (662)
T ss_dssp EEEEEEEEE----------ETTBCEEEEEECTTSCEEEEECT-TSSCEEEEECTTTCCEEESSCCSSBSS--CCCCSTTC
T ss_pred ccccEEeCC----------CCCceEcceEECCCCeEEEEECC-CCCeEEEEEECCCCceeeccccccccc--CccccccC
Confidence 332221110 00001111222 37888876654 2334799999977777665 3222111 0000 0
Q ss_pred EEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-C---cEEE
Q 036391 251 VDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R---EKLV 325 (389)
Q Consensus 251 ~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~---~~l~ 325 (389)
..+... +|++++.... ....||.++-.+ .. ...+.... .....+. ..+++.+++... . ..++
T Consensus 297 ~~~~~~~~~~~~~~~~~--~~~~l~~~d~~~--~~---~~~l~~~~-----~~~~~~~-s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 297 RWFAPLANGLIAVVHGK--GAAVLGILDPES--GE---LVDAAGPW-----TEWAATL-TVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp CSEEECTTSCEEEEEBS--SSCEEEEEETTT--TE---EEECCSSC-----CEEEEEE-EEETTEEEEEEEETTEEEEEE
T ss_pred ceEeEeCCCEEEEEEEc--CccEEEEEECCC--Cc---EEEecCCC-----CeEEEEE-ecCCCEEEEEEcCCCCCCEEE
Confidence 123443 7777766655 588999998532 22 23333211 1123331 345666666533 2 2588
Q ss_pred EEeCCCCcEEEE
Q 036391 326 WFDLETNSLRTV 337 (389)
Q Consensus 326 ~yd~~~~~~~~v 337 (389)
.+|+++++.+.+
T Consensus 364 ~~d~~~g~~~~l 375 (662)
T 3azo_A 364 ELDTVTGRARTI 375 (662)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCceEEe
Confidence 899999988777
No 95
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=77.89 E-value=33 Score=29.43 Aligned_cols=67 Identities=7% Similarity=0.099 Sum_probs=40.0
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCC---CEEEEEEcCcEEEEEeCCCC
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNG---VKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g---~~i~l~~~~~~l~~yd~~~~ 332 (389)
|++.+.+. .+..+.||-+... ...|.....+.... ....-+++++++ ..+.-...++.+..||+++.
T Consensus 170 ~~~l~sgs-~D~~v~lwd~~~~--~~~~~~~~~l~~H~-----~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 170 SRKFVTGG-ADNLVKIWKYNSD--AQTYVLESTLEGHS-----DWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp CCEEEEEE-TTSCEEEEEEETT--TTEEEEEEEECCCS-----SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cceEEEEc-CCCcEEEEEEcCC--CceEEEEEEecCCC-----CceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 34444443 3448999998752 34576666554321 124556777764 44444555667888998764
No 96
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=77.81 E-value=50 Score=31.56 Aligned_cols=200 Identities=11% Similarity=0.061 Sum_probs=101.3
Q ss_pred ecceEEEee-CCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 93 CNGLIALCN-SVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 93 ~~GLl~l~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
-+|.+++.. .+..+.|+|+.|++... ++.. . . ..++.++|..+ | ++ +.. ....+.+|+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g-~------~--~~~v~~spdg~-~-l~-v~~--------~d~~V~v~D 206 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-Y------A--VHISRMSASGR-Y-LL-VIG--------RDARIDMID 206 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCCEEEEEECS-T------T--EEEEEECTTSC-E-EE-EEE--------TTSEEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCceEEEEEecC-c------c--cceEEECCCCC-E-EE-EEC--------CCCeEEEEE
Confidence 366666655 45679999999987643 2211 1 1 34566666433 2 22 221 114688898
Q ss_pred c--CCCcEEEcccCCcccccccccccccccccCceeeE----CCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccc
Q 036391 171 L--KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA----GGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVN 243 (389)
Q Consensus 171 s--~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~ 243 (389)
. .+++ .+..++. ... ...-.+.- +|..-+.+.. ....|..+|..+.+.. .++.+....
T Consensus 207 ~~~~t~~--~~~~i~~----------g~~-p~~va~sp~~~~dg~~l~v~~~--~~~~v~v~D~~t~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 207 LWAKEPT--KVAEIKI----------GIE-ARSVESSKFKGYEDRYTIAGAY--WPPQFAIMDGETLEPKQIVSTRGMTV 271 (543)
T ss_dssp TTSSSCE--EEEEEEC----------CSE-EEEEEECCSTTCTTTEEEEEEE--ESSEEEEEETTTCCEEEEEECCEECS
T ss_pred CcCCCCc--EEEEEec----------CCC-cceEEeCCCcCCCCCEEEEEEc--cCCeEEEEeccccccceeecccCccc
Confidence 8 5543 2222220 000 01111112 5654333332 2356888998876543 345432110
Q ss_pred c---CC-CceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEE
Q 036391 244 V---SY-ANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLE 318 (389)
Q Consensus 244 ~---~~-~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~ 318 (389)
. .+ ...-..+... +|...++.......+.+|-+.+.. . .++..++... ..+-++++++|..++..
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~--~--l~~~~i~~~~------~~~~~~~spdg~~l~va 341 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDID--N--LTVTSIGAAP------FLHDGGWDSSHRYFMTA 341 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSS--S--CEEEEEECCS------SCCCEEECTTSCEEEEE
T ss_pred CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCC--c--ceeEEeccCc------CccCceECCCCCEEEEE
Confidence 0 00 1011233333 455555555555577777665422 1 1233444322 23457888898877766
Q ss_pred Ec-CcEEEEEeCCCCcEEEE
Q 036391 319 VR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 319 ~~-~~~l~~yd~~~~~~~~v 337 (389)
.. ++.+.++|++++++...
T Consensus 342 ~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 342 ANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp EGGGTEEEEEETTTTEEEEE
T ss_pred ecCCCeEEEEECCCCeEEEe
Confidence 43 56799999999987553
No 97
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=77.22 E-value=32 Score=28.96 Aligned_cols=112 Identities=9% Similarity=0.057 Sum_probs=59.5
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKES 284 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~ 284 (389)
+|.+||... ....|..+|+....-..+ .+... ... ..++.. +|.|++...... .-.|+++.-.+.
T Consensus 90 ~~~lyv~d~---~~~~I~~~~~~g~~~~~~-~~~~~---~~P--~~i~vd~~~g~lyv~~~~~~-~~~I~~~~~dg~--- 156 (267)
T 1npe_A 90 GRTIFWTDS---QLDRIEVAKMDGTQRRVL-FDTGL---VNP--RGIVTDPVRGNLYWTDWNRD-NPKIETSHMDGT--- 156 (267)
T ss_dssp TTEEEEEET---TTTEEEEEETTSCSCEEE-ECSSC---SSE--EEEEEETTTTEEEEEECCSS-SCEEEEEETTSC---
T ss_pred CCeEEEEEC---CCCEEEEEEcCCCCEEEE-EECCC---CCc--cEEEEeeCCCEEEEEECCCC-CcEEEEEecCCC---
Confidence 579999754 345899999876543333 11111 111 234443 688888775421 123444442221
Q ss_pred eEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 285 WTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 285 W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
-.+. +.... .....-+++.++++.+++... ...+..+|++++..+.+
T Consensus 157 ~~~~--~~~~~----~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 204 (267)
T 1npe_A 157 NRRI--LAQDN----LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKV 204 (267)
T ss_dssp CCEE--EECTT----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEE
T ss_pred CcEE--EEECC----CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEE
Confidence 1111 11111 112344666667778887754 45799999987655444
No 98
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=77.00 E-value=40 Score=29.94 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=60.4
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCcee-eeeCCCCcccc-------CCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEe
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEF-YQLPLPDSVNV-------SYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMK 277 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~-~~i~~P~~~~~-------~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~ 277 (389)
+|.+...+..+.....|..+|+.+.+. ..+..|..... ..... ..+.-. +|.+.+++.. +..+.||.+.
T Consensus 244 ~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 321 (397)
T 1sq9_A 244 QGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWV-MSLSFNDSGETLCSAGW-DGKLRFWDVK 321 (397)
T ss_dssp STTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCE-EEEEECSSSSEEEEEET-TSEEEEEETT
T ss_pred CCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcE-EEEEECCCCCEEEEEeC-CCeEEEEEcC
Confidence 455444433211115788999876543 33443211000 01111 133333 5666555443 4489999876
Q ss_pred eCCCCCCeEEEEEEcCCCCC-CC---------------cceeeeEEEEeCC----------CEEEEEEcCcEEEEEeCCC
Q 036391 278 EHAVKESWTKLISVQEPTPT-RS---------------FLFLRPLGYSRNG----------VKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 278 ~~~~~~~W~~~~~i~~~~~~-~~---------------~~~~~p~~~~~~g----------~~i~l~~~~~~l~~yd~~~ 331 (389)
. ...+..+...... .. .....-+++.++| ..++....++.+.+||+++
T Consensus 322 ~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 322 T------KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp T------TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred C------CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 4 2344555411000 00 1234557778887 5777777778899999887
Q ss_pred Cc
Q 036391 332 NS 333 (389)
Q Consensus 332 ~~ 333 (389)
++
T Consensus 396 g~ 397 (397)
T 1sq9_A 396 GK 397 (397)
T ss_dssp --
T ss_pred CC
Confidence 63
No 99
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=76.84 E-value=31 Score=28.72 Aligned_cols=186 Identities=17% Similarity=0.124 Sum_probs=96.4
Q ss_pred CceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCC-CcEEEccc
Q 036391 103 VQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKI-NSWRRISN 181 (389)
Q Consensus 103 ~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~-~~W~~~~~ 181 (389)
...++++|+.+++...+..... ...++.+.|... +-++ .. ...+.+++..+ +....+..
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~--------~v~~~~~spdg~-~l~~--~~---------~~~i~~~d~~~~~~~~~~~~ 80 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE--------LFEAPNWSPDGK-YLLL--NS---------EGLLYRLSLAGDPSPEKVDT 80 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS--------CCEEEEECTTSS-EEEE--EE---------TTEEEEEESSSCCSCEECCC
T ss_pred ceeEEEEeCCCCceeeeccCCc--------ceEeeEECCCCC-EEEE--Ec---------CCeEEEEeCCCCCCceEecc
Confidence 4579999999988776554321 123455555433 2222 11 12678899888 76665532
Q ss_pred CCcccccccccccccccccCceeeECCeEEEEccC-CCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCe
Q 036391 182 LPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPK-SSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGC 259 (389)
Q Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~-~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~ 259 (389)
... ..........-+|.....+.. ......|..+|..+.....+...... ..+.-. +|+
T Consensus 81 ~~~-----------~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--------~~~~~spdg~ 141 (297)
T 2ojh_A 81 GFA-----------TICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPS--------YWHGWSPDGK 141 (297)
T ss_dssp TTC-----------CCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSE--------EEEEECTTSS
T ss_pred ccc-----------cccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCc--------cceEECCCCC
Confidence 110 000111112235543333331 22346788888877665554333221 122222 666
Q ss_pred EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-C--cEEEEEeCCCCcEEE
Q 036391 260 LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-R--EKLVWFDLETNSLRT 336 (389)
Q Consensus 260 L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~--~~l~~yd~~~~~~~~ 336 (389)
..++.......+.||.++..+ .... .+.... ....-+.++++|..+++... + .+++.+++.++..+.
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~--~~~~---~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~ 211 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDS--GVET---RLTHGE-----GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVER 211 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTT--CCEE---ECCCSS-----SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEE
T ss_pred EEEEEECCCCceEEEEEECCC--Ccce---EcccCC-----CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEE
Confidence 544333334478999987532 2221 111111 12344667778887777643 2 357778877777765
Q ss_pred E
Q 036391 337 V 337 (389)
Q Consensus 337 v 337 (389)
+
T Consensus 212 ~ 212 (297)
T 2ojh_A 212 I 212 (297)
T ss_dssp C
T ss_pred E
Confidence 5
No 100
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=76.67 E-value=42 Score=30.09 Aligned_cols=194 Identities=8% Similarity=0.022 Sum_probs=98.4
Q ss_pred cc-eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~G-Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+| +++....++.+.|||..+++....-... ......+.+.|... .+.... ....+.+|+..
T Consensus 108 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~---~l~s~s--------~d~~i~iwd~~ 169 (420)
T 3vl1_A 108 QMRRFILGTTEGDIKVLDSNFNLQREIDQAH-------VSEITKLKFFPSGE---ALISSS--------QDMQLKIWSVK 169 (420)
T ss_dssp SSCEEEEEETTSCEEEECTTSCEEEEETTSS-------SSCEEEEEECTTSS---EEEEEE--------TTSEEEEEETT
T ss_pred CCCEEEEEECCCCEEEEeCCCcceeeecccc-------cCccEEEEECCCCC---EEEEEe--------CCCeEEEEeCC
Confidence 44 4444446678999999888776543221 12344566666432 222221 23468889887
Q ss_pred CCcE-EEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCc
Q 036391 173 INSW-RRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYAN 248 (389)
Q Consensus 173 ~~~W-~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~ 248 (389)
++.= +.+.... ..-.++. -+|.....+.. ...|..+|+.+.+... +..+.... ..
T Consensus 170 ~~~~~~~~~~h~---------------~~v~~~~~~~~~~~l~s~~~---d~~v~iwd~~~~~~~~~~~~~~~~~---~~ 228 (420)
T 3vl1_A 170 DGSNPRTLIGHR---------------ATVTDIAIIDRGRNVLSASL---DGTIRLWECGTGTTIHTFNRKENPH---DG 228 (420)
T ss_dssp TCCCCEEEECCS---------------SCEEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEECBTTBTT---CC
T ss_pred CCcCceEEcCCC---------------CcEEEEEEcCCCCEEEEEcC---CCcEEEeECCCCceeEEeecCCCCC---CC
Confidence 6531 1111000 0001111 13443333222 2458888887665433 33322211 11
Q ss_pred eEEEEEE----------------------eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeE
Q 036391 249 VHVDVGS----------------------LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPL 306 (389)
Q Consensus 249 ~~~~l~~----------------------~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~ 306 (389)
. ..+.. -+|.+.+++.. +..+.+|-+... .....+.... .....-+
T Consensus 229 v-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~i~i~d~~~~------~~~~~~~~~~----~~~v~~~ 296 (420)
T 3vl1_A 229 V-NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV-SGVITVHNVFSK------EQTIQLPSKF----TCSCNSL 296 (420)
T ss_dssp E-EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-TSCEEEEETTTC------CEEEEECCTT----SSCEEEE
T ss_pred c-cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-CCeEEEEECCCC------ceeEEccccc----CCCceeE
Confidence 1 11111 25555555444 447999988642 1233332211 1124567
Q ss_pred EEEeCCC-EEEEEEcCcEEEEEeCCCCc--EEEEE
Q 036391 307 GYSRNGV-KLLLEVRREKLVWFDLETNS--LRTVK 338 (389)
Q Consensus 307 ~~~~~g~-~i~l~~~~~~l~~yd~~~~~--~~~v~ 338 (389)
+++++|. .++....++.+.+||+++++ ...+.
T Consensus 297 ~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~ 331 (420)
T 3vl1_A 297 TVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFL 331 (420)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE
T ss_pred EEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhh
Confidence 7788887 77777777889999999864 34443
No 101
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=76.06 E-value=38 Score=29.22 Aligned_cols=117 Identities=11% Similarity=0.047 Sum_probs=61.9
Q ss_pred ECCe-EEEEccCCCCCcEEEEEECCCcee----eeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeC
Q 036391 206 AGGA-LHWVSPKSSTRSVIMAFNLVAKEF----YQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEH 279 (389)
Q Consensus 206 ~~G~-lywl~~~~~~~~~il~fD~~~e~~----~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~ 279 (389)
-+|. +|.... ....|..+|+.+.+. ..++.+.... .+.. -+|+..++.......+.+|-++.
T Consensus 185 pdg~~l~v~~~---~~~~v~v~d~~~~~~~~~~~~~~~~~~~~--------~~~~spdg~~l~v~~~~~~~i~~~d~~~- 252 (331)
T 3u4y_A 185 PDGNFAFVANL---IGNSIGILETQNPENITLLNAVGTNNLPG--------TIVVSRDGSTVYVLTESTVDVFNFNQLS- 252 (331)
T ss_dssp TTSSEEEEEET---TTTEEEEEECSSTTSCEEEEEEECSSCCC--------CEEECTTSSEEEEECSSEEEEEEEETTT-
T ss_pred CCCCEEEEEeC---CCCeEEEEECCCCcccceeeeccCCCCCc--------eEEECCCCCEEEEEEcCCCEEEEEECCC-
Confidence 3576 444332 235799999987664 2333321111 1222 36764444433333566665543
Q ss_pred CCCCCeEEEEEEcCCCC--CCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 280 AVKESWTKLISVQEPTP--TRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 280 ~~~~~W~~~~~i~~~~~--~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
.....+..+..... .........++++++|..+++... ++.+.+||+.++....+
T Consensus 253 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~ 310 (331)
T 3u4y_A 253 ---GTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYV 310 (331)
T ss_dssp ---TEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ---CceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccce
Confidence 23333444432211 111111134688899998887755 45799999999877665
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=76.01 E-value=38 Score=29.30 Aligned_cols=73 Identities=10% Similarity=0.123 Sum_probs=42.7
Q ss_pred eEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC-CCcEEEE
Q 036391 259 CLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE-TNSLRTV 337 (389)
Q Consensus 259 ~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~-~~~~~~v 337 (389)
.+.+.+ ..+..+.||.++... ...|.....-... ....-++++++|..+.....++.+..|+.. .+.|+.+
T Consensus 229 ~~las~-s~D~~v~iw~~~~~~-~~~~~~~~~~~~~------~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~ 300 (316)
T 3bg1_A 229 STIASC-SQDGRVFIWTCDDAS-SNTWSPKLLHKFN------DVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI 300 (316)
T ss_dssp CEEEEE-ETTCEEEEEECSSTT-CCCCBCCEEEECS------SCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEE
T ss_pred ceEEEE-cCCCeEEEEEccCcc-ccchhhhhhhcCC------CcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEe
Confidence 444433 344589999987532 1234221111111 124567788888887777777778888875 4677777
Q ss_pred EE
Q 036391 338 KI 339 (389)
Q Consensus 338 ~~ 339 (389)
..
T Consensus 301 ~~ 302 (316)
T 3bg1_A 301 SD 302 (316)
T ss_dssp EE
T ss_pred ee
Confidence 43
No 103
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=75.60 E-value=38 Score=29.08 Aligned_cols=68 Identities=4% Similarity=0.030 Sum_probs=42.9
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
++.+.+.+ ..+..+.||-++. ...+..+.... ....-+++++++..++-...++.+..||+++.+...
T Consensus 197 ~~~~l~s~-s~D~~i~iWd~~~------~~~~~~~~~h~-----~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~ 264 (304)
T 2ynn_A 197 DKPYMITA-SDDLTIKIWDYQT------KSCVATLEGHM-----SNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK 264 (304)
T ss_dssp TCCEEEEE-ETTSEEEEEETTT------TEEEEEEECCS-----SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCEEEEE-cCCCeEEEEeCCC------CccceeeCCCC-----CCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 44444443 3455899998764 12344444221 124456778888877777777789999999987654
No 104
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=75.01 E-value=49 Score=29.99 Aligned_cols=193 Identities=11% Similarity=0.013 Sum_probs=97.8
Q ss_pred cceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCC
Q 036391 94 NGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKI 173 (389)
Q Consensus 94 ~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~ 173 (389)
.+.|++.. ...+...++.+++...+-.. .....++.+|+..+. |++.. .....+..++...
T Consensus 87 ~~~l~~~~-~~~I~~i~~~~~~~~~~~~~--------~~~~~gl~~d~~~~~--ly~~D--------~~~~~I~r~~~~g 147 (386)
T 3v65_B 87 EPVLLFAN-RIDIRQVLPHRSEYTLLLNN--------LENAIALDFHHRREL--VFWSD--------VTLDRILRANLNG 147 (386)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCCEEEECS--------CSCEEEEEEETTTTE--EEEEE--------TTTTEEEEEETTS
T ss_pred cceeEeec-CccceeeccCCCcEEEEecC--------CCccEEEEEecCCCe--EEEEe--------CCCCcEEEEecCC
Confidence 45555543 34577777766655443321 122567888875543 33321 1233667777776
Q ss_pred CcEEEcccCCcccccccccccccccccCceee-ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEE
Q 036391 174 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL-AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVD 252 (389)
Q Consensus 174 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~-~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~ 252 (389)
...+.+.... ......-++- .+|.|||... ....|..+|+....-..+. ..... . ...
T Consensus 148 ~~~~~~~~~~------------~~~p~glavd~~~g~lY~~d~---~~~~I~~~~~dg~~~~~l~-~~~l~---~--P~g 206 (386)
T 3v65_B 148 SNVEEVVSTG------------LESPGGLAVDWVHDKLYWTDS---GTSRIEVANLDGAHRKVLL-WQSLE---K--PRA 206 (386)
T ss_dssp CCEEEEECSS------------CSCCCCEEEETTTTEEEEEET---TTTEEEECBTTSCSCEEEE-CSSCS---C--EEE
T ss_pred CCcEEEEeCC------------CCCccEEEEEeCCCeEEEEcC---CCCeEEEEeCCCCceEEee-cCCCC---C--CcE
Confidence 6554442111 1001111222 3689999854 3458999998765433331 11111 1 123
Q ss_pred EEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeC
Q 036391 253 VGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDL 329 (389)
Q Consensus 253 l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~ 329 (389)
++.. +|.|++..... .-.|++++-.+. .. .. .+.. .+ ....-+++.++++.||+... ..++..+|+
T Consensus 207 iavdp~~g~ly~td~~~--~~~I~r~~~dG~-~~--~~-~~~~-~~----~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGN--TPRIEASSMDGS-GR--RI-IADT-HL----FWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EEEETTTTEEEEEECSS--SCEEEEEETTSC-SC--EE-EECS-SC----SCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred EEEEcCCCeEEEeccCC--CCEEEEEeCCCC-Cc--EE-EEEC-CC----CCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 4444 78888776543 234666654331 11 11 1111 11 11234566655677777654 356888998
Q ss_pred CCCcEEEE
Q 036391 330 ETNSLRTV 337 (389)
Q Consensus 330 ~~~~~~~v 337 (389)
.+...+.+
T Consensus 276 dG~~~~~~ 283 (386)
T 3v65_B 276 DGSHRKAV 283 (386)
T ss_dssp TSCSCEEE
T ss_pred CCCeeEEE
Confidence 87655544
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=75.00 E-value=49 Score=30.08 Aligned_cols=114 Identities=10% Similarity=0.086 Sum_probs=54.9
Q ss_pred eeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCC-
Q 036391 204 VLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAV- 281 (389)
Q Consensus 204 v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~- 281 (389)
+..+|.....+.. ...|..+|+.+.+... +..... .+.-...+|...+++.. +..+.||-+.....
T Consensus 302 ~~~~~~~l~~g~~---dg~i~iwd~~~~~~~~~~~~h~~--------~v~~~~~~~~~l~sg~~-dg~i~vwd~~~~~~~ 369 (435)
T 1p22_A 302 LQYRDRLVVSGSS---DNTIRLWDIECGACLRVLEGHEE--------LVRCIRFDNKRIVSGAY-DGKIKVWDLVAALDP 369 (435)
T ss_dssp EEEETTEEEEEET---TSCEEEEETTTCCEEEEECCCSS--------CEEEEECCSSEEEEEET-TSCEEEEEHHHHTST
T ss_pred EEeCCCEEEEEeC---CCeEEEEECCCCCEEEEEeCCcC--------cEEEEEecCCEEEEEeC-CCcEEEEECCCCCCc
Confidence 4445654444332 3468899998765432 332111 12223337776555554 44899999865321
Q ss_pred --CCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 282 --KESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 282 --~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
......+..+.... . ...-+.+ +|..++....++.+..||+.++....
T Consensus 370 ~~~~~~~~~~~~~~h~--~---~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~ 419 (435)
T 1p22_A 370 RAPAGTLCLRTLVEHS--G---RVFRLQF--DEFQIVSSSHDDTILIWDFLNDPAAQ 419 (435)
T ss_dssp TSCTTTTEEEEECCCS--S---CCCCEEE--CSSCEEECCSSSEEEEEC--------
T ss_pred cccccchheeeccCCC--C---CeEEEEe--CCCEEEEEeCCCEEEEEECCCCCCcc
Confidence 11122333333211 1 1222333 66776666667789999998876443
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=74.98 E-value=50 Score=30.11 Aligned_cols=186 Identities=9% Similarity=0.028 Sum_probs=98.2
Q ss_pred EeeecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 90 LGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 90 ~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+.-.+.+++....++.+.|||..+++...--... ......+.+++ ++ ++ ... ....+.+|
T Consensus 165 ~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h-------~~~v~~~~~~~---~~-l~-s~s--------~dg~i~~w 224 (445)
T 2ovr_B 165 SQMRDNIIISGSTDRTLKVWNAETGECIHTLYGH-------TSTVRCMHLHE---KR-VV-SGS--------RDATLRVW 224 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEEET---TE-EE-EEE--------TTSEEEEE
T ss_pred EEecCCEEEEEeCCCeEEEEECCcCcEEEEECCC-------CCcEEEEEecC---CE-EE-EEe--------CCCEEEEE
Confidence 3334566666667788999999887654321111 11223344442 23 22 221 23468888
Q ss_pred EcCCCcEEEc-ccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCC
Q 036391 170 SLKINSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYA 247 (389)
Q Consensus 170 ss~~~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 247 (389)
+..++.-... .... ..-.++..+|.....+.. ...|..+|+.+.+... +.....
T Consensus 225 d~~~~~~~~~~~~~~---------------~~v~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~~~~------ 280 (445)
T 2ovr_B 225 DIETGQCLHVLMGHV---------------AAVRCVQYDGRRVVSGAY---DFMVKVWDPETETCLHTLQGHTN------ 280 (445)
T ss_dssp ESSSCCEEEEEECCS---------------SCEEEEEECSSCEEEEET---TSCEEEEEGGGTEEEEEECCCSS------
T ss_pred ECCCCcEEEEEcCCc---------------ccEEEEEECCCEEEEEcC---CCEEEEEECCCCcEeEEecCCCC------
Confidence 8877642211 1100 111234456765555443 3568889988765332 332111
Q ss_pred ceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEE
Q 036391 248 NVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWF 327 (389)
Q Consensus 248 ~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~y 327 (389)
.+.-...+|...+++.. +..+.+|-+... ..+..+.... ....++..+++.++....++.+..|
T Consensus 281 --~v~~~~~~~~~l~~~~~-d~~i~i~d~~~~------~~~~~~~~~~-------~~v~~~~~~~~~l~~~~~dg~i~vw 344 (445)
T 2ovr_B 281 --RVYSLQFDGIHVVSGSL-DTSIRVWDVETG------NCIHTLTGHQ-------SLTSGMELKDNILVSGNADSTVKIW 344 (445)
T ss_dssp --CEEEEEECSSEEEEEET-TSCEEEEETTTC------CEEEEECCCC-------SCEEEEEEETTEEEEEETTSCEEEE
T ss_pred --ceEEEEECCCEEEEEeC-CCeEEEEECCCC------CEEEEEcCCc-------ccEEEEEEeCCEEEEEeCCCeEEEE
Confidence 11222237776655554 448999988742 1233333221 1223344467777777777789999
Q ss_pred eCCCCcEE
Q 036391 328 DLETNSLR 335 (389)
Q Consensus 328 d~~~~~~~ 335 (389)
|+++++..
T Consensus 345 d~~~~~~~ 352 (445)
T 2ovr_B 345 DIKTGQCL 352 (445)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcEE
Confidence 99887643
No 107
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.52 E-value=45 Score=28.88 Aligned_cols=206 Identities=8% Similarity=0.014 Sum_probs=100.0
Q ss_pred eecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE
Q 036391 92 SCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS 170 (389)
Q Consensus 92 s~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys 170 (389)
+.+|-+.+.. ....++++||.+++...+..... ....++.+++.. +++... ... ......+.+|+
T Consensus 53 ~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~~~i~~~~dg---~l~v~~-~~~---~~~~~~i~~~d 118 (333)
T 2dg1_A 53 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHK-------ANPAAIKIHKDG---RLFVCY-LGD---FKSTGGIFAAT 118 (333)
T ss_dssp CTTSCEEEEETTTCEEEEECTTTCCEEEEEECSS-------SSEEEEEECTTS---CEEEEE-CTT---SSSCCEEEEEC
T ss_pred CCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC-------CCcceEEECCCC---cEEEEe-CCC---CCCCceEEEEe
Confidence 3466655443 45679999999988776532111 123456666543 222221 110 00123677888
Q ss_pred cCCCcEEEc-ccCCcccccccccccccccccCceee--ECCeEEEEccCC---CCCcEEEEEECCCceeeeeCCCCcccc
Q 036391 171 LKINSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKS---STRSVIMAFNLVAKEFYQLPLPDSVNV 244 (389)
Q Consensus 171 s~~~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~---~~~~~il~fD~~~e~~~~i~~P~~~~~ 244 (389)
..++.-+.+ ..... . .....+. -+|.+|...... .....|..+|..+.++..+.- ...
T Consensus 119 ~~~~~~~~~~~~~~~-----------~--~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~- 182 (333)
T 2dg1_A 119 ENGDNLQDIIEDLST-----------A--YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ--NIS- 182 (333)
T ss_dssp TTSCSCEEEECSSSS-----------C--CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE--EES-
T ss_pred CCCCEEEEEEccCcc-----------C--CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec--CCC-
Confidence 877655422 11110 0 0111222 257766543210 113579999988766655421 110
Q ss_pred CCCceEEEEEEe-CCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEE-EE--cCCCCCCCcceeeeEEEEeCCCEEEEEE
Q 036391 245 SYANVHVDVGSL-EGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLI-SV--QEPTPTRSFLFLRPLGYSRNGVKLLLEV 319 (389)
Q Consensus 245 ~~~~~~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~-~i--~~~~~~~~~~~~~p~~~~~~g~~i~l~~ 319 (389)
. ...++.. +|+ |++.... ...+.+|.++..+ ....... .+ .... . ....-+++.++|. +++..
T Consensus 183 --~--~~~i~~~~dg~~l~v~~~~-~~~i~~~d~~~~g--~~~~~~~~~~~~~~~~---~-~~~~~i~~d~~G~-l~v~~ 250 (333)
T 2dg1_A 183 --V--ANGIALSTDEKVLWVTETT-ANRLHRIALEDDG--VTIQPFGATIPYYFTG---H-EGPDSCCIDSDDN-LYVAM 250 (333)
T ss_dssp --S--EEEEEECTTSSEEEEEEGG-GTEEEEEEECTTS--SSEEEEEEEEEEECCS---S-SEEEEEEEBTTCC-EEEEE
T ss_pred --c--ccceEECCCCCEEEEEeCC-CCeEEEEEecCCC--cCcccccceEEEecCC---C-CCCCceEECCCCC-EEEEE
Confidence 0 1123333 565 5555433 3367677665322 1222111 11 1111 0 1233466666776 45544
Q ss_pred -cCcEEEEEeCCCCcEEEEEE
Q 036391 320 -RREKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 320 -~~~~l~~yd~~~~~~~~v~~ 339 (389)
..+.+..||++++....+..
T Consensus 251 ~~~~~v~~~d~~g~~~~~~~~ 271 (333)
T 2dg1_A 251 YGQGRVLVFNKRGYPIGQILI 271 (333)
T ss_dssp ETTTEEEEECTTSCEEEEEEC
T ss_pred cCCCEEEEECCCCCEEEEEEc
Confidence 34679999998777776654
No 108
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=72.96 E-value=46 Score=28.82 Aligned_cols=63 Identities=11% Similarity=0.119 Sum_probs=40.1
Q ss_pred EEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 262 VFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 262 ~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
++....+..+.+|-+... .....+... .....-++++++|..++....++.+.+||+.+++..
T Consensus 169 l~s~~~d~~i~~wd~~~~------~~~~~~~~h-----~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 169 IISAGNDKMVKAWNLNQF------QIEADFIGH-----NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp EEEEETTSCEEEEETTTT------EEEEEECCC-----CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEeCCCEEEEEECCcc------hhheeecCC-----CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 344444558999987642 223322211 112456778888888877777788999999987643
No 109
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=72.86 E-value=48 Score=28.94 Aligned_cols=195 Identities=11% Similarity=0.020 Sum_probs=91.1
Q ss_pred eEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC--cEEEcccC
Q 036391 105 ELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN--SWRRISNL 182 (389)
Q Consensus 105 ~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~--~W~~~~~~ 182 (389)
.++++||.|++....-... ......++.+|+..+ ++... .....+.+|+.... .=..+...
T Consensus 70 ~i~~~d~~~g~~~~~~~~~------~~~~p~gia~d~~g~---l~v~d--------~~~~~v~~~~~~g~~~~~~~~~~~ 132 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN------LFYLPHGLSIDTDGN---YWVTD--------VALHQVFKLDPHSKEGPLLILGRS 132 (329)
T ss_dssp CEEEECTTTCCEEEEECTT------TCSSEEEEEECTTSC---EEEEE--------TTTTEEEEECTTCSSCCSEEESBT
T ss_pred cEEEEECCCCeEEeccCCC------ccCCceEEEECCCCC---EEEEE--------CCCCEEEEEeCCCCeEEEEEeccc
Confidence 6999999988875422211 122345667776433 33221 12346777877543 11222110
Q ss_pred CcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCcc----ccCCCceEEEEEE
Q 036391 183 PRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSV----NVSYANVHVDVGS 255 (389)
Q Consensus 183 p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~----~~~~~~~~~~l~~ 255 (389)
..... .........++.+ +|.+|+.... ....|..||...+....+..+... .. .-.....++.
T Consensus 133 ~~~g~------~~~~~~~P~~ia~~~~~g~lyv~d~~--~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~-~~~~p~gia~ 203 (329)
T 3fvz_A 133 MQPGS------DQNHFCQPTDVAVEPSTGAVFVSDGY--CNSRIVQFSPSGKFVTQWGEESSGSSPRPG-QFSVPHSLAL 203 (329)
T ss_dssp TBCCC------STTCCSSEEEEEECTTTCCEEEEECS--SCCEEEEECTTSCEEEEECEECCSSSCCTT-EESCEEEEEE
T ss_pred CCCCC------CccccCCCcEEEEeCCCCeEEEEeCC--CCCeEEEEcCCCCEEEEeccCCCCCCCCCc-ccCCCcEEEE
Confidence 00000 0000112234444 6889987531 246899999766655555322110 00 0011123444
Q ss_pred e-C-CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE--------cCcEEE
Q 036391 256 L-E-GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV--------RREKLV 325 (389)
Q Consensus 256 ~-~-G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~--------~~~~l~ 325 (389)
. + |.|+++..... .+.+|..+. ... +..+...... ....-+++.+ +.++... ....+.
T Consensus 204 d~~~g~l~v~d~~~~-~I~~~~~~~----G~~--~~~~~~~~~~---~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~ 271 (329)
T 3fvz_A 204 VPHLDQLCVADRENG-RIQCFKTDT----KEF--VREIKHASFG---RNVFAISYIP--GFLFAVNGKPYFGDQEPVQGF 271 (329)
T ss_dssp ETTTTEEEEEETTTT-EEEEEETTT----CCE--EEEECCTTTT---TCEEEEEEET--TEEEEEECCCCTTCSCCCCEE
T ss_pred ECCCCEEEEEECCCC-EEEEEECCC----CcE--EEEEeccccC---CCcceeeecC--CEEEEeCCCEEeccCCCcEEE
Confidence 4 4 88887765533 777776652 223 3334322111 1122344444 2333221 123588
Q ss_pred EEeCCCCcEEEE
Q 036391 326 WFDLETNSLRTV 337 (389)
Q Consensus 326 ~yd~~~~~~~~v 337 (389)
.+|+.++++...
T Consensus 272 ~~~~~~g~~~~~ 283 (329)
T 3fvz_A 272 VMNFSSGEIIDV 283 (329)
T ss_dssp EEETTTCCEEEE
T ss_pred EEEcCCCeEEEE
Confidence 899888775543
No 110
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=72.28 E-value=24 Score=33.81 Aligned_cols=107 Identities=7% Similarity=0.066 Sum_probs=64.7
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEeC-CeEEEEEecCCCeEEEEEEeeCCC-CCCeEEEEEEcCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSLE-GCLCVFCFYNLVYVDMWMMKEHAV-KESWTKLISVQEPTPT 297 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~-G~L~~~~~~~~~~l~iW~l~~~~~-~~~W~~~~~i~~~~~~ 297 (389)
..|..+|+.+.+... ++..... +......+..-+ |.+++........+.+|-++..+. ...|..+..+....-
T Consensus 346 ~~v~v~D~~tg~l~~~i~~g~~p---h~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~- 421 (543)
T 1nir_A 346 NKVAVIDSKDRRLSALVDVGKTP---HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGG- 421 (543)
T ss_dssp TEEEEEETTTTEEEEEEECSSSB---CCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCS-
T ss_pred CeEEEEECCCCeEEEeeccCCCC---CCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCC-
Confidence 478889999876544 3432111 111112233334 666555443455899999885321 234988888886431
Q ss_pred CCcceeeeEEEEeCCCEEEEEEc-------CcEEEEEeCCCCcEE
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLR 335 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~-------~~~l~~yd~~~~~~~ 335 (389)
....+.++++|..++.... +..+.+||.++.+..
T Consensus 422 ----~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 422 ----GSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ----CCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred ----CceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC
Confidence 1345778899998887641 346999999987643
No 111
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=71.75 E-value=56 Score=29.25 Aligned_cols=201 Identities=10% Similarity=0.055 Sum_probs=101.2
Q ss_pred eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc
Q 036391 96 LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS 175 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~ 175 (389)
+++....+..+.|||..+++....-.... .......+.+++.. .+ ++ ... ....+.+|+.+++.
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~-~~-l~-~~~--------~d~~i~iwd~~~~~ 209 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDV-----HPDTIYSVDWSRDG-AL-IC-TSC--------RDKRVRVIEPRKGT 209 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTT-----CCSCEEEEEECTTS-SC-EE-EEE--------TTSEEEEEETTTTE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCC-----CCCceEEEEECCCC-CE-EE-EEe--------cCCcEEEEeCCCCc
Confidence 44444456789999998876543211010 11234456666632 22 22 221 23478899988765
Q ss_pred EEEcccCCcccccccccccccccccCce-eeECCeEEEEccCCCCCcEEEEEECCCcee--eeeCCCCccccCCCceEEE
Q 036391 176 WRRISNLPRFLRDFYDYLYHSLFRKGYG-VLAGGALHWVSPKSSTRSVIMAFNLVAKEF--YQLPLPDSVNVSYANVHVD 252 (389)
Q Consensus 176 W~~~~~~p~~~~~~~~~~~~~~~~~~~~-v~~~G~lywl~~~~~~~~~il~fD~~~e~~--~~i~~P~~~~~~~~~~~~~ 252 (389)
-...-... +........ ..-+|.+...+........|..+|+.+..- ....++... .. ..
T Consensus 210 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-----~v-~~ 272 (402)
T 2aq5_A 210 VVAEKDRP-----------HEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSS-----GV-LL 272 (402)
T ss_dssp EEEEEECS-----------SCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCS-----SC-EE
T ss_pred eeeeeccC-----------CCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCC-----ce-eE
Confidence 32211000 000001111 122465544432112346899999987432 222322211 11 12
Q ss_pred EE-EeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 253 VG-SLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 253 l~-~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
+. .-+|...+++...+..+.+|.+.... ..-..+....... ...-+++.++|..++ ..++.+..|++.+
T Consensus 273 ~~~s~~~~~l~~~g~~dg~i~i~d~~~~~--~~~~~l~~~~~~~------~v~~~~~sp~~~~~~--s~~~~~~~~~l~~ 342 (402)
T 2aq5_A 273 PFFDPDTNIVYLCGKGDSSIRYFEITSEA--PFLHYLSMFSSKE------SQRGMGYMPKRGLEV--NKCEIARFYKLHE 342 (402)
T ss_dssp EEEETTTTEEEEEETTCSCEEEEEECSST--TCEEEEEEECCSS------CCSEEEECCGGGSCG--GGTEEEEEEEEET
T ss_pred EEEcCCCCEEEEEEcCCCeEEEEEecCCC--cceEeecccccCC------cccceEEecccccce--ecceeEEEEEcCC
Confidence 22 23666665555545589999998622 1122222222111 245577777775443 2455688899999
Q ss_pred CcEEEEEE
Q 036391 332 NSLRTVKI 339 (389)
Q Consensus 332 ~~~~~v~~ 339 (389)
++.+.+.+
T Consensus 343 ~~~~~i~~ 350 (402)
T 2aq5_A 343 RKCEPIAM 350 (402)
T ss_dssp TEEEEEEE
T ss_pred CcEEEEEE
Confidence 99888855
No 112
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=71.32 E-value=55 Score=28.98 Aligned_cols=93 Identities=10% Similarity=0.044 Sum_probs=49.1
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +..... .. ..+.-. +|.-+++....+..+.||-++. -..+..+...
T Consensus 249 ~~i~~wd~~~~~~~~~~~~~~~------~v-~~l~~sp~~~~~lasgs~D~~i~iwd~~~------~~~~~~~~H~---- 311 (357)
T 4g56_B 249 GNVSLVNIKNPDSAQTSAVHSQ------NI-TGLAYSYHSSPFLASISEDCTVAVLDADF------SEVFRDLSHR---- 311 (357)
T ss_dssp SCEEEEESSCGGGCEEECCCSS------CE-EEEEECSSSSCCEEEEETTSCEEEECTTS------CEEEEECCCS----
T ss_pred cceeEEECCCCcEeEEEeccce------eE-EEEEEcCCCCCEEEEEeCCCEEEEEECCC------CcEeEECCCC----
Confidence 468888987754322 332221 11 123332 4533344344445899996653 1223322221
Q ss_pred CcceeeeEEEEe-CCCEEEEEEcCcEEEEEeCCCC
Q 036391 299 SFLFLRPLGYSR-NGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 299 ~~~~~~p~~~~~-~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
....-+++++ ++..++-+..++.+..||+.++
T Consensus 312 --~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 312 --DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp --SCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred --CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 1245577776 6777666666778999998653
No 113
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=70.85 E-value=49 Score=28.25 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=56.3
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +..... .. ..+.-. +|.+.+.+.. +..+.+|-+... ..+..+....
T Consensus 129 ~~i~iwd~~~~~~~~~~~~~~~------~v-~~~~~~~~~~~l~~~~~-d~~i~~wd~~~~------~~~~~~~~~~--- 191 (312)
T 4ery_A 129 ESVRIWDVKTGKCLKTLPAHSD------PV-SAVHFNRDGSLIVSSSY-DGLCRIWDTASG------QCLKTLIDDD--- 191 (312)
T ss_dssp SCEEEEETTTCCEEEEECCCSS------CE-EEEEECTTSSEEEEEET-TSCEEEEETTTC------CEEEEECCSS---
T ss_pred CcEEEEECCCCEEEEEecCCCC------cE-EEEEEcCCCCEEEEEeC-CCcEEEEECCCC------ceeeEEeccC---
Confidence 468888988765332 322111 11 122222 6666555544 348999987641 1222222111
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
.....-+++.++|..++....++.+..||+++++...
T Consensus 192 -~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 228 (312)
T 4ery_A 192 -NPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK 228 (312)
T ss_dssp -CCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE
T ss_pred -CCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 1123456778888888887777889999999886543
No 114
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=70.62 E-value=85 Score=30.86 Aligned_cols=193 Identities=12% Similarity=0.034 Sum_probs=99.5
Q ss_pred eEEEEcCCccccc--ccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccC
Q 036391 105 ELALFNPSTRKLK--TLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNL 182 (389)
Q Consensus 105 ~~~V~NP~T~~~~--~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~ 182 (389)
.+++++.-|++.. .+-..+. ......+..+++.. .|-++.... .. ....+.+.+..++.|+.+...
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~~~-----~~~~~~~~~~SpDG-~~l~~~~~~--~~----~~~~l~~~~~~~~~~~~l~~~ 270 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHERTG-----DPTTFLQSDLSRDG-KYLFVYILR--GW----SENDVYWKRPGEKDFRLLVKG 270 (695)
T ss_dssp EEEEEETTSCGGGCEEEECCCC-----CTTCEEEEEECTTS-CCEEEEEEE--TT----TEEEEEEECTTCSSCEEEEEC
T ss_pred EEEEEECCCCchhceEEEecCC-----CCEEEEEEEECCCC-CEEEEEEeC--CC----CceEEEEEcCCCCceEEeecC
Confidence 4888888887632 2222211 11123345555543 443333221 10 234555666666778776432
Q ss_pred CcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCce---eeeeCCCCccccCCCceEEEEEEeCCe
Q 036391 183 PRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKE---FYQLPLPDSVNVSYANVHVDVGSLEGC 259 (389)
Q Consensus 183 p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~---~~~i~~P~~~~~~~~~~~~~l~~~~G~ 259 (389)
.. .....+.-+|.+|..+........|..+|+.+.. |..+-.+... .. --.+...+|.
T Consensus 271 ~~--------------~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~----~~-l~~~~~~~~~ 331 (695)
T 2bkl_A 271 VG--------------AKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS----AS-LLSVSIVGGH 331 (695)
T ss_dssp SS--------------CCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS----CE-EEEEEEETTE
T ss_pred CC--------------ceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC----Ce-EEEEEEECCE
Confidence 20 1112334567766654433345789999997643 6665332211 01 1123444888
Q ss_pred EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----cEEEEEeCCCCcEE
Q 036391 260 LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLR 335 (389)
Q Consensus 260 L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----~~l~~yd~~~~~~~ 335 (389)
|.+....+. ...||+++-.+ + ....+..... .....+++.++|+.+++...+ ..++.||+++++.+
T Consensus 332 lv~~~~~dg-~~~l~~~~~~g--~---~~~~l~~~~~----~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~ 401 (695)
T 2bkl_A 332 LSLEYLKDA-TSEVRVATLKG--K---PVRTVQLPGV----GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSE 401 (695)
T ss_dssp EEEEEEETT-EEEEEEEETTC--C---EEEECCCSSS----SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEEEEECC-EEEEEEEeCCC--C---eeEEecCCCC----eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 877665433 77889887422 1 2333432210 012223344577777776432 36999999998876
Q ss_pred EEE
Q 036391 336 TVK 338 (389)
Q Consensus 336 ~v~ 338 (389)
.+.
T Consensus 402 ~l~ 404 (695)
T 2bkl_A 402 LWA 404 (695)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=70.53 E-value=38 Score=29.46 Aligned_cols=70 Identities=17% Similarity=0.174 Sum_probs=45.2
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
|.+.+++.. +..+.||.++..+ ......+.... ....-++++++|..++....++.+.+||+++++...+
T Consensus 54 g~~l~~~~~-dg~i~iw~~~~~~----~~~~~~~~~h~-----~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSW-ANDVRCWEVQDSG----QTIPKAQQMHT-----GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEET-TSEEEEEEECTTS----CEEEEEEEECS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred ceEEEEECC-CCcEEEEEcCCCC----ceeEEEecccc-----CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee
Confidence 465555544 4489999998522 22222222211 1245567778888888777778899999999887665
No 116
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=70.51 E-value=50 Score=31.89 Aligned_cols=124 Identities=18% Similarity=0.147 Sum_probs=63.7
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEEC-CC--ceeeee-CCCCcccc--CCCceEEEEEEeCCeEEEEEecCCCeEEEE
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNL-VA--KEFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFCFYNLVYVDMW 274 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~-~~--e~~~~i-~~P~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW 274 (389)
..++..+|.+|..+.. ...|.++|. .+ +.|+.- ..+..... ..+.....++..+|+|++..... .+.
T Consensus 56 ~~P~v~~g~vyv~~~~---~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg----~l~ 128 (571)
T 2ad6_A 56 GAPLVIGDMMYVHSAF---PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQANG----HLL 128 (571)
T ss_dssp SCCEEETTEEEEECST---TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS----EEE
T ss_pred cccEEECCEEEEEeCC---CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCCC----EEE
Confidence 4568899999987541 257999998 55 456652 22211000 00001112455677776664321 244
Q ss_pred EEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 275 MMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 275 ~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
.++-...+..|.... .... ....-...|+.. ++.|++... ++.++.||.+|++..+-
T Consensus 129 alD~~tG~~~W~~~~--~~~~-~~~~~~~~P~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 191 (571)
T 2ad6_A 129 ALDAKTGKINWEVEV--CDPK-VGSTLTQAPFVA---KDTVLMGCSGAELGVRGAVNAFDLKTGELKWR 191 (571)
T ss_dssp EEETTTCCEEEEEEC--CCGG-GTCBCCSCCEEE---TTEEEEECBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred EEECCCCCEEEEecC--CCCC-ccceeccCCEEE---CCEEEEEecCCccCCCCEEEEEECCCCcEEEE
Confidence 455322245675431 1100 000001234432 457777654 45799999999887654
No 117
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=70.49 E-value=92 Score=31.21 Aligned_cols=216 Identities=12% Similarity=0.122 Sum_probs=105.1
Q ss_pred EEeeecceEEEeeCCceEEEEcCCcccccccCCCCC-CCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPC-FVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~-~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+....+|-+.+......++.+||.++++..+..... +.... ......+..|... . +++.. .. .+.
T Consensus 220 i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~-~~~i~~i~~d~~g-~---lWigt--------~~-Gl~ 285 (795)
T 4a2l_A 220 ILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSIS-SNYIRSLAMDSQN-R---LWIGT--------FN-DLN 285 (795)
T ss_dssp EEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCS-CSBEEEEEECTTS-C---EEEEE--------SS-CEE
T ss_pred EEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccC-CCeEEEEEEcCCC-C---EEEEe--------CC-hhh
Confidence 333446666665444468889999988776654321 00111 1223334444321 1 33432 11 467
Q ss_pred EEEcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCcc-cc
Q 036391 168 VYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSV-NV 244 (389)
Q Consensus 168 Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~-~~ 244 (389)
+|+..++.+......+... .......-.+++. +|.+ |+++. ...|..+|..+..|..+...... ..
T Consensus 286 ~~~~~~~~~~~~~~~~~~~-------~~l~~~~i~~i~~D~~g~l-Wigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~l 354 (795)
T 4a2l_A 286 IYHEGTDSFASYSSNPVEN-------GSLSQRSVRSIFMDSQGGM-WLGTY---FGGLNYYHPIRNRFKNIRNIPYKNSL 354 (795)
T ss_dssp EEETTTTEEEEECCCTTST-------TSCSSSCEEEEEECTTSCE-EEEES---SSCEEEECGGGGSSEEECCCTTSSSC
T ss_pred eEcCCCCeEEEEecCCCCC-------CCCCCCcEEEEEEeCCcCE-EEEEC---CCCeEEeCCCcccceEEcCCCCCCCC
Confidence 8888888888764322000 0011111122332 3554 66553 24699999999888876432211 11
Q ss_pred CCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCC-C-CCCcceeeeEEEEeCCCEEEEEEcC
Q 036391 245 SYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPT-P-TRSFLFLRPLGYSRNGVKLLLEVRR 321 (389)
Q Consensus 245 ~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-~-~~~~~~~~p~~~~~~g~~i~l~~~~ 321 (389)
+..... .+.+. +|.|.+..... .+..| +.. ...+.... ..... . ........-++...+|..+.+.+.+
T Consensus 355 ~~~~V~-~i~~d~~g~lWiGt~~~--Gl~~~--~~~--~~~~~~~~-~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~ 426 (795)
T 4a2l_A 355 SDNVVS-CIVEDKDKNLWIGTNDG--GLNLY--NPI--TQRFTSYT-LQEDESARGIGSNNIKAVYVDEKKSLVYIGTHA 426 (795)
T ss_dssp SCSSEE-EEEECTTSCEEEEESSS--CEEEE--CTT--TCCEEEEC-CC------CCSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCeeE-EEEECCCCCEEEEECCC--CeEEE--cCC--CCcEEEEe-cCCCCcccCCCCccEEEEEEcCCCCEEEEEeCc
Confidence 022222 33333 67777654332 23322 221 12343221 01000 0 0001123334444455547888776
Q ss_pred cEEEEEeCCCCcEEEE
Q 036391 322 EKLVWFDLETNSLRTV 337 (389)
Q Consensus 322 ~~l~~yd~~~~~~~~v 337 (389)
..|+.||.++++++.+
T Consensus 427 ~Gl~~~d~~~~~~~~~ 442 (795)
T 4a2l_A 427 GGLSILHRNSGQVENF 442 (795)
T ss_dssp TEEEEEETTTCCEEEE
T ss_pred CceeEEeCCCCcEEEe
Confidence 7799999999887765
No 118
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=68.79 E-value=58 Score=28.27 Aligned_cols=96 Identities=8% Similarity=0.153 Sum_probs=56.0
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +...... .. .+.-. +|.+.+.+. .+..+.||-++.. .....+....
T Consensus 186 g~i~iwd~~~~~~~~~~~~h~~~------v~-~l~~spd~~~l~s~s-~dg~i~iwd~~~~------~~~~~~~~h~--- 248 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLEGHAMP------IR-SLTFSPDSQLLVTAS-DDGYIKIYDVQHA------NLAGTLSGHA--- 248 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC------CC-EEEECTTSCEEEEEC-TTSCEEEEETTTC------CEEEEECCCS---
T ss_pred CeEEEEECCCCcEEEEEcccCCc------ee-EEEEcCCCCEEEEEc-CCCeEEEEECCCc------ceeEEEcCCC---
Confidence 468888988765432 3322111 11 23332 666555444 3458999987641 1233333211
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-++++++|..++....++.+.+||+++++..
T Consensus 249 --~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 249 --SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp --SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred --CceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 12445677888888777777778999999987654
No 119
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=68.65 E-value=55 Score=27.92 Aligned_cols=72 Identities=14% Similarity=0.174 Sum_probs=42.8
Q ss_pred eEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC-CCcEEEE
Q 036391 259 CLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE-TNSLRTV 337 (389)
Q Consensus 259 ~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~-~~~~~~v 337 (389)
.+.+ ....+..+.||.++.. ...|.... +..... .....-++++++|..|.....++.+..|+.. .+.|+.+
T Consensus 220 ~~la-s~s~D~~v~iWd~~~~--~~~~~~~~-~~~~~~---~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~ 292 (297)
T 2pm7_B 220 SYMA-SVSQDRTCIIWTQDNE--QGPWKKTL-LKEEKF---PDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPA 292 (297)
T ss_dssp EEEE-EEETTSCEEEEEESST--TSCCEEEE-SSSSCC---SSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC
T ss_pred eEEE-EEECCCcEEEEEeCCC--CCccceee-eecccC---CCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEec
Confidence 4443 4444558999998752 23464431 211111 1124456778888888777777778888876 4567765
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=67.92 E-value=69 Score=28.79 Aligned_cols=189 Identities=12% Similarity=0.030 Sum_probs=93.4
Q ss_pred eEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC
Q 036391 96 LIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN 174 (389)
Q Consensus 96 Ll~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~ 174 (389)
.+++.. .+..+.+||+.+++....-+.. ....++.+++..+ + +.+..............+.+|+..++
T Consensus 225 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~g~-~--l~~~~~~~~~~~~~dg~i~~~d~~~~ 293 (433)
T 3bws_A 225 LVYCSNWISEDISVIDRKTKLEIRKTDKI--------GLPRGLLLSKDGK-E--LYIAQFSASNQESGGGRLGIYSMDKE 293 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECCCC--------SEEEEEEECTTSS-E--EEEEEEESCTTCSCCEEEEEEETTTT
T ss_pred EEEEEecCCCcEEEEECCCCcEEEEecCC--------CCceEEEEcCCCC-E--EEEEECCCCccccCCCeEEEEECCCC
Confidence 343343 4567899999887765432221 1244566665432 2 22222111110012457889999877
Q ss_pred cEEEcccCCcccccccccccccccccCceeeECC-eEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEEE
Q 036391 175 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGG-ALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVD 252 (389)
Q Consensus 175 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G-~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~ 252 (389)
.-......+ . ....-...-+| .+|..+. ....|..+|+.+.+... ++..... ..
T Consensus 294 ~~~~~~~~~------------~-~~~~~~~~~~g~~l~~~~~---~~~~v~v~d~~~~~~~~~~~~~~~~--------~~ 349 (433)
T 3bws_A 294 KLIDTIGPP------------G-NKRHIVSGNTENKIYVSDM---CCSKIEVYDLKEKKVQKSIPVFDKP--------NT 349 (433)
T ss_dssp EEEEEEEEE------------E-CEEEEEECSSTTEEEEEET---TTTEEEEEETTTTEEEEEEECSSSE--------EE
T ss_pred cEEeeccCC------------C-CcceEEECCCCCEEEEEec---CCCEEEEEECCCCcEEEEecCCCCC--------Ce
Confidence 543221111 0 00011112245 3554432 23579999998765432 3322111 12
Q ss_pred EEEe-CCeEEEEEecCC--------------CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEE
Q 036391 253 VGSL-EGCLCVFCFYNL--------------VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLL 317 (389)
Q Consensus 253 l~~~-~G~L~~~~~~~~--------------~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l 317 (389)
+... +|+..++..... ..+.+|-++. ...+..+.... ...-++++++|..++.
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~------~~~~~~~~~~~------~~~~~~~s~dg~~l~~ 417 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTT------DTVKEFWEAGN------QPTGLDVSPDNRYLVI 417 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTT------TEEEEEEECSS------SEEEEEECTTSCEEEE
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCC------CcEEEEecCCC------CCceEEEcCCCCEEEE
Confidence 3333 565444433321 2677776543 23344444321 2455677788888877
Q ss_pred EEc-CcEEEEEeCCC
Q 036391 318 EVR-REKLVWFDLET 331 (389)
Q Consensus 318 ~~~-~~~l~~yd~~~ 331 (389)
... ++.+.+||+++
T Consensus 418 ~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 418 SDFLDHQIRVYRRDG 432 (433)
T ss_dssp EETTTTEEEEEEETT
T ss_pred EECCCCeEEEEEecC
Confidence 654 67788898753
No 121
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=67.81 E-value=58 Score=27.90 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=39.6
Q ss_pred EEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 261 CVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 261 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
.++....+..+.+|-+.. ...+..+.... ....-++++++|..++....++.+..||+++.+..
T Consensus 187 ~~~s~~~d~~i~i~d~~~------~~~~~~~~~h~-----~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLAN------CKLKTNHIGHT-----GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp EEEEEETTSCEEEEETTT------TEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEEcCCCEEEEEECCC------CceeeEecCCC-----CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 334444445788997764 22333333211 12445677888888877777788999999987654
No 122
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=67.79 E-value=59 Score=27.98 Aligned_cols=112 Identities=9% Similarity=0.024 Sum_probs=59.5
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKES 284 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~ 284 (389)
+|.+|..... ...|..+|+.+.+.. .++.+.... .. .+.. -+|+..++.......+.+|-++. .
T Consensus 10 ~~~~~v~~~~---~~~v~~~d~~~~~~~~~~~~~~~~~----~~--~~~~s~dg~~~~v~~~~~~~i~~~d~~t----~- 75 (349)
T 1jmx_B 10 GHEYMIVTNY---PNNLHVVDVASDTVYKSCVMPDKFG----PG--TAMMAPDNRTAYVLNNHYGDIYGIDLDT----C- 75 (349)
T ss_dssp TCEEEEEEET---TTEEEEEETTTTEEEEEEECSSCCS----SC--EEEECTTSSEEEEEETTTTEEEEEETTT----T-
T ss_pred CCEEEEEeCC---CCeEEEEECCCCcEEEEEecCCCCC----Cc--eeEECCCCCEEEEEeCCCCcEEEEeCCC----C-
Confidence 4555554332 357999999887654 456654111 11 2232 36654444433344677776543 1
Q ss_pred eEEEEEEcCCCCCC-CcceeeeEEEEeCCCEEEEEEcC------------cEEEEEeCCCCc
Q 036391 285 WTKLISVQEPTPTR-SFLFLRPLGYSRNGVKLLLEVRR------------EKLVWFDLETNS 333 (389)
Q Consensus 285 W~~~~~i~~~~~~~-~~~~~~p~~~~~~g~~i~l~~~~------------~~l~~yd~~~~~ 333 (389)
..+..+....... ......-++++++|+.+++.... ..+..||+++++
T Consensus 76 -~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 76 -KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp -EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred -cEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2233343321100 00112446778889888877533 679999998844
No 123
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=67.62 E-value=70 Score=28.77 Aligned_cols=71 Identities=7% Similarity=-0.021 Sum_probs=45.4
Q ss_pred CCeEEEEEecCC------CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCC-EEEEEE-cCcEEEEEe
Q 036391 257 EGCLCVFCFYNL------VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEV-RREKLVWFD 328 (389)
Q Consensus 257 ~G~L~~~~~~~~------~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~-~~~~l~~yd 328 (389)
+++||+...... ..=.||+++- .....+.+|+... ...-+.+.+||+ .++... .++.+.+||
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~----~t~~vv~~i~~g~------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTG----LVGQTSSQISLGH------DVDAISVAQDGGPDLYALSAGTEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEEC----CCCEEEEEEECCC------CcCeEEECCCCCeEEEEEcCCCCeEEEEE
Confidence 456666553211 1236888874 4566777777543 135678888998 555543 356899999
Q ss_pred CCCCcEEEE
Q 036391 329 LETNSLRTV 337 (389)
Q Consensus 329 ~~~~~~~~v 337 (389)
+++++....
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 999876543
No 124
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=67.26 E-value=68 Score=28.45 Aligned_cols=97 Identities=9% Similarity=0.033 Sum_probs=54.4
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +.... ... ..+... +|.+.+++.. +..+.+|.+.... . +..+....
T Consensus 227 g~i~~~d~~~~~~~~~~~~~~------~~i-~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~--~----~~~~~~~~--- 289 (425)
T 1r5m_A 227 GAIFVYQITEKTPTGKLIGHH------GPI-SVLEFNDTNKLLLSASD-DGTLRIWHGGNGN--S----QNCFYGHS--- 289 (425)
T ss_dssp GCEEEEETTCSSCSEEECCCS------SCE-EEEEEETTTTEEEEEET-TSCEEEECSSSBS--C----SEEECCCS---
T ss_pred CeEEEEEcCCCceeeeeccCC------Cce-EEEEECCCCCEEEEEcC-CCEEEEEECCCCc--c----ceEecCCC---
Confidence 578999998764332 22211 111 123333 6665554443 4489999877521 1 12222111
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
....-+++.++| .++....++.+..||+++++....
T Consensus 290 --~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 290 --QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp --SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE
T ss_pred --ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe
Confidence 124556777777 666666777899999988775443
No 125
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=67.14 E-value=68 Score=28.46 Aligned_cols=65 Identities=11% Similarity=0.067 Sum_probs=42.1
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
+|++.+++.. +..+.||-++. ...+..+... ......-++|++||..|+-...++.+-++|+..+
T Consensus 280 dg~~lasgs~-D~~V~iwd~~~------~~~~~~~~~g----H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 280 KGELAVLASN-DNSIALVKLKD------LSMSKIFKQA----HSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSCEEEEEET-TSCEEEEETTT------TEEEEEETTS----SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred CCCceEEEcC-CCEEEEEECCC------CcEEEEecCc----ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 7776655554 44899998764 2344444211 1113566888999988777777778999998643
No 126
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=66.89 E-value=61 Score=27.82 Aligned_cols=182 Identities=8% Similarity=-0.028 Sum_probs=89.9
Q ss_pred eEEEeeCCceEEEEcCCccc----ccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 96 LIALCNSVQELALFNPSTRK----LKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 96 Ll~l~~~~~~~~V~NP~T~~----~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
+|+....+..+.|||..+++ ...+... ......+.+.+. +.+.++... ....+.+|+.
T Consensus 25 ~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~--------~~~v~~~~~~~~-~~~~l~~~~---------~dg~i~~wd~ 86 (342)
T 1yfq_A 25 LLLITSWDGSLTVYKFDIQAKNVDLLQSLRY--------KHPLLCCNFIDN-TDLQIYVGT---------VQGEILKVDL 86 (342)
T ss_dssp EEEEEETTSEEEEEEEETTTTEEEEEEEEEC--------SSCEEEEEEEES-SSEEEEEEE---------TTSCEEEECS
T ss_pred EEEEEcCCCeEEEEEeCCCCccccceeeeec--------CCceEEEEECCC-CCcEEEEEc---------CCCeEEEEEe
Confidence 44444456788999887776 3322211 112344555554 332333222 2236788888
Q ss_pred -CCCcEEEccc--CCcccccccccccccccccCceeeE-CCeEEEEccCCCCCcEEEEEECCC---------cee-eeeC
Q 036391 172 -KINSWRRISN--LPRFLRDFYDYLYHSLFRKGYGVLA-GGALHWVSPKSSTRSVIMAFNLVA---------KEF-YQLP 237 (389)
Q Consensus 172 -~~~~W~~~~~--~p~~~~~~~~~~~~~~~~~~~~v~~-~G~lywl~~~~~~~~~il~fD~~~---------e~~-~~i~ 237 (389)
.++.-..+.. ... .-.++.+ .|.....+. ....|..+|+.+ .+. ..+.
T Consensus 87 ~~~~~~~~~~~~~~~~---------------~v~~l~~~~~~~l~s~~---~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 148 (342)
T 1yfq_A 87 IGSPSFQALTNNEANL---------------GICRICKYGDDKLIAAS---WDGLIEVIDPRNYGDGVIAVKNLNSNNTK 148 (342)
T ss_dssp SSSSSEEECBSCCCCS---------------CEEEEEEETTTEEEEEE---TTSEEEEECHHHHTTBCEEEEESCSSSSS
T ss_pred ccCCceEeccccCCCC---------------ceEEEEeCCCCEEEEEc---CCCeEEEEcccccccccccccCCeeeEEe
Confidence 7776654433 110 0011111 133222222 235788888775 321 1122
Q ss_pred CCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEee-CCCCCCeEEEEEEcCCCCCCCcceeeeEEEEe-CCCEE
Q 036391 238 LPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKE-HAVKESWTKLISVQEPTPTRSFLFLRPLGYSR-NGVKL 315 (389)
Q Consensus 238 ~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~-~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~-~g~~i 315 (389)
.+. . -..+....+. ++.......+.+|.+.. .. ...... ..... ....-+++++ +|..+
T Consensus 149 ~~~-------~-v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~--~~~~~~-~~~~~------~~i~~i~~~~~~~~~l 209 (342)
T 1yfq_A 149 VKN-------K-IFTMDTNSSR--LIVGMNNSQVQWFRLPLCED--DNGTIE-ESGLK------YQIRDVALLPKEQEGY 209 (342)
T ss_dssp SCC-------C-EEEEEECSSE--EEEEESTTEEEEEESSCCTT--CCCEEE-ECSCS------SCEEEEEECSGGGCEE
T ss_pred eCC-------c-eEEEEecCCc--EEEEeCCCeEEEEECCcccc--ccceee-ecCCC------CceeEEEECCCCCCEE
Confidence 111 1 1233334444 33333445899999875 22 112111 11111 1245567777 88888
Q ss_pred EEEEcCcEEEEEeCCCC
Q 036391 316 LLEVRREKLVWFDLETN 332 (389)
Q Consensus 316 ~l~~~~~~l~~yd~~~~ 332 (389)
+....++.+..||.+.+
T Consensus 210 ~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 210 ACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEETTSEEEEEECCTT
T ss_pred EEEecCCcEEEEEEcCC
Confidence 88777778888877665
No 127
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=66.76 E-value=77 Score=28.93 Aligned_cols=66 Identities=9% Similarity=-0.077 Sum_probs=41.6
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
|.+.+.+.. +..+.||-+.... - +..+... ......-++++ +|..++....++.+.+||+++++..
T Consensus 210 ~~~l~s~~~-d~~i~vwd~~~~~----~--~~~~~~~----h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDR-DEHIKISHYPQCF----I--VDKWLFG----HKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEET-TSCEEEEEESCTT----C--EEEECCC----CSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred CcEEEEEcC-CCcEEEEECCCCc----e--eeeeecC----CCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 666555544 4489999987421 1 1111111 11124556777 8888888777788999999998743
No 128
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=66.63 E-value=93 Score=30.97 Aligned_cols=97 Identities=16% Similarity=0.267 Sum_probs=60.0
Q ss_pred cEEEEEECCCceeeee-CCCCccccCCCceEEEEEEe-C--CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCC
Q 036391 221 SVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSL-E--GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTP 296 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~-~--G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~ 296 (389)
..|..+|+.+++...+ .+..+. ... ..+.-. + |.+.+.+.. +..+.+|.++. ..|.....+....
T Consensus 31 g~I~vwd~~~~~~~~~~~l~~h~----~~V-~~l~~s~~~~~~~l~s~s~-Dg~I~vwd~~~----~~~~~~~~~~~h~- 99 (753)
T 3jro_A 31 KTIKIFEVEGETHKLIDTLTGHE----GPV-WRVDWAHPKFGTILASCSY-DGKVLIWKEEN----GRWSQIAVHAVHS- 99 (753)
T ss_dssp TEEEEEEEETTEEEEEEEECCCS----SCE-EEEEECCTTSCSEEEEEET-TSCEEEEEEET----TEEEEEEEECCCS-
T ss_pred CcEEEEecCCCCCccceeccCCc----Cce-EEEEecCCCCCCEEEEEeC-CCeEEEEECCC----CcccccccccCCC-
Confidence 5688888876655543 222221 111 133332 3 666555554 44899999885 3466666554322
Q ss_pred CCCcceeeeEEEEeC--CCEEEEEEcCcEEEEEeCCCC
Q 036391 297 TRSFLFLRPLGYSRN--GVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 297 ~~~~~~~~p~~~~~~--g~~i~l~~~~~~l~~yd~~~~ 332 (389)
....-+.++++ |..++....++.+.+||++++
T Consensus 100 ----~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 100 ----ASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp ----SCEEEEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ----CCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 12455677777 888888887888999999887
No 129
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=66.60 E-value=66 Score=28.05 Aligned_cols=203 Identities=11% Similarity=0.058 Sum_probs=100.6
Q ss_pred EEEeeecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecC-CCCeeEEEEEEEeCCCCCCceeEE
Q 036391 88 EVLGSCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKS-NDDYKLVRVLHFKGNDGEDVEVEV 166 (389)
Q Consensus 88 ~~~~s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~-~~~ykvv~~~~~~~~~~~~~~~~~ 166 (389)
.+.++.+|.+.+......+.++|..+++...--... .......+.++|. .+.+ ++ ... ....+
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~-l~-s~s--------~dg~i 151 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVD------SANEIIYMYGHNEVNTEY-FI-WAD--------NRGTI 151 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECC------CSSCEEEEECCC---CCE-EE-EEE--------TTCCE
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecC------CCCCEEEEEcCCCCCCCE-EE-EEe--------CCCcE
Confidence 455677788877776777888888887732211111 1112445666663 2333 22 111 23367
Q ss_pred EEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceee--eeCCCCcccc
Q 036391 167 EVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFY--QLPLPDSVNV 244 (389)
Q Consensus 167 ~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~--~i~~P~~~~~ 244 (389)
.+|+.+++.-....... . ......-...-+|.+...+. ....|..+|+.+.+.. .+... +.
T Consensus 152 ~~wd~~~~~~~~~~~~~----------~-~~~i~~~~~~pdg~~lasg~---~dg~i~iwd~~~~~~~~~~~~~~-h~-- 214 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAK----------S-DVEYSSGVLHKDSLLLALYS---PDGILDVYNLSSPDQASSRFPVD-EE-- 214 (343)
T ss_dssp EEEESSSSCEEEEECCC----------S-SCCCCEEEECTTSCEEEEEC---TTSCEEEEESSCTTSCCEECCCC-TT--
T ss_pred EEEECCCCcEEEEEecC----------C-CCceEEEEECCCCCEEEEEc---CCCEEEEEECCCCCCCccEEecc-CC--
Confidence 88988877543221111 0 00000011122455544433 2357899999887644 23321 11
Q ss_pred CCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCccee--eeEEEEeCCCEEEEEEc-
Q 036391 245 SYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFL--RPLGYSRNGVKLLLEVR- 320 (389)
Q Consensus 245 ~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~--~p~~~~~~g~~i~l~~~- 320 (389)
... ..+.-. +|...+.+. +. .+.||-+........ +.. +....... .-++++++|..++....
T Consensus 215 --~~v-~~l~fs~~g~~l~s~~-~~-~v~iwd~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~g~~l~~~s~~ 281 (343)
T 3lrv_A 215 --AKI-KEVKFADNGYWMVVEC-DQ-TVVCFDLRKDVGTLA------YPT--YTIPEFKTGTVTYDIDDSGKNMIAYSNE 281 (343)
T ss_dssp --SCE-EEEEECTTSSEEEEEE-SS-BEEEEETTSSTTCBS------SCC--CBC-----CCEEEEECTTSSEEEEEETT
T ss_pred --CCE-EEEEEeCCCCEEEEEe-CC-eEEEEEcCCCCccee------ecc--cccccccccceEEEECCCCCEEEEecCC
Confidence 111 133333 666655555 34 899998875321111 110 00000001 24777888888777655
Q ss_pred CcEEEEEeC--CCCcEEE
Q 036391 321 REKLVWFDL--ETNSLRT 336 (389)
Q Consensus 321 ~~~l~~yd~--~~~~~~~ 336 (389)
++.+.+|+. ..+.|+.
T Consensus 282 d~~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 282 SNSLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTEEEEEEECTTTCSEEE
T ss_pred CCcEEEEEEcccccceEe
Confidence 666777776 4556765
No 130
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=66.47 E-value=68 Score=31.03 Aligned_cols=126 Identities=13% Similarity=0.092 Sum_probs=63.1
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEECCC--ceeeee-CCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEe
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNLVA--KEFYQL-PLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMK 277 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~ 277 (389)
..++..+|.+|..+.. ..|.++|..+ +.|+.- ..|.......+.....++..+|+|++..... .+..|+
T Consensus 62 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~dg----~l~AlD 133 (582)
T 1flg_A 62 SQAIVSDGVIYVTASY----SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLDA----SVVALN 133 (582)
T ss_dssp CCCEEETTEEEEEETT----TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETTT----EEEEEE
T ss_pred eccEEECCEEEEEcCC----CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCCC----EEEEEE
Confidence 4568899999987652 2499999875 457652 3332110000000112345677776654322 244444
Q ss_pred eCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEe--CCC-EEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 278 EHAVKESWTKLISVQEPTPTRSFLFLRPLGYSR--NGV-KLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 278 ~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~--~g~-~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
-...+..|.....-..... .....|+.... +|. .|++... .+.++.||.+|++..+.
T Consensus 134 ~~TG~~~W~~~~~~~~~~~---~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~ 199 (582)
T 1flg_A 134 KNTGKVVWKKKFADHGAGY---TMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWM 199 (582)
T ss_dssp SSSCCEEEEEECSCGGGTC---BCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEE
T ss_pred CCCCCEEeeecCCCCCcCc---ccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEee
Confidence 3222455754311000000 00134544432 233 5555432 35799999999987764
No 131
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=66.11 E-value=56 Score=27.06 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=57.7
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCe
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESW 285 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W 285 (389)
+|.+|+... ...|..||..+.....+..+... . ...++.. +|.|++...... .+.+| +. + ....
T Consensus 77 ~g~l~v~~~----~~~i~~~d~~~~~~~~~~~~~~~----~--p~~i~~~~~g~l~v~~~~~~-~i~~~--~~-~-~~~~ 141 (270)
T 1rwi_B 77 AGTVYVTDF----NNRVVTLAAGSNNQTVLPFDGLN----Y--PEGLAVDTQGAVYVADRGNN-RVVKL--AA-G-SKTQ 141 (270)
T ss_dssp TCCEEEEET----TTEEEEECTTCSCCEECCCCSCS----S--EEEEEECTTCCEEEEEGGGT-EEEEE--CT-T-CCSC
T ss_pred CCCEEEEcC----CCEEEEEeCCCceEeeeecCCcC----C--CcceEECCCCCEEEEECCCC-EEEEE--EC-C-Ccee
Confidence 578777543 35899999988776655433211 1 1234444 788877764432 45444 32 2 1111
Q ss_pred EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEE
Q 036391 286 TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRT 336 (389)
Q Consensus 286 ~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~ 336 (389)
... .... .....-+++.++|. +++... ...+..||++++....
T Consensus 142 ~~~---~~~~----~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 142 TVL---PFTG----LNDPDGVAVDNSGN-VYVTDTDNNRVVKLEAESNNQVV 185 (270)
T ss_dssp EEC---CCCS----CCSCCCEEECTTCC-EEEEEGGGTEEEEECTTTCCEEE
T ss_pred Eee---cccc----CCCceeEEEeCCCC-EEEEECCCCEEEEEecCCCceEe
Confidence 111 1111 11123466666776 555543 4579999998876554
No 132
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=66.05 E-value=1.1e+02 Score=30.50 Aligned_cols=111 Identities=14% Similarity=0.128 Sum_probs=56.1
Q ss_pred CeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeE
Q 036391 208 GALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWT 286 (389)
Q Consensus 208 G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~ 286 (389)
|.+ |+++. ...|..||..+.++..+..|.... .... ..+.+. +|.|.+..... .++.++.. ...+.
T Consensus 374 g~l-Wigt~---~~Gl~~~~~~~~~~~~~~~~~~~~--~~~v-~~i~~d~~g~lWigt~~~----Gl~~~~~~--~~~~~ 440 (781)
T 3v9f_A 374 GKL-WIGTD---GGGINVFENGKRVAIYNKENRELL--SNSV-LCSLKDSEGNLWFGTYLG----NISYYNTR--LKKFQ 440 (781)
T ss_dssp SCE-EEEEB---SSCEEEEETTEEEEECC-----CC--CSBE-EEEEECTTSCEEEEETTE----EEEEECSS--SCEEE
T ss_pred CCE-EEEeC---CCcEEEEECCCCeEEEccCCCCCC--Ccce-EEEEECCCCCEEEEeccC----CEEEEcCC--CCcEE
Confidence 555 56542 246999999998887764322221 1222 244444 78877754321 24444431 12332
Q ss_pred EEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEEE
Q 036391 287 KLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTVK 338 (389)
Q Consensus 287 ~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v~ 338 (389)
. +..... .......+....+ +.+++.+. ..|+.||+++++++.+.
T Consensus 441 ~---~~~~~~--~~~~v~~i~~d~~-g~lwigt~-~Gl~~~~~~~~~~~~~~ 485 (781)
T 3v9f_A 441 I---IELEKN--ELLDVRVFYEDKN-KKIWIGTH-AGVFVIDLASKKVIHHY 485 (781)
T ss_dssp E---CCSTTT--CCCCEEEEEECTT-SEEEEEET-TEEEEEESSSSSCCEEE
T ss_pred E---eccCCC--CCCeEEEEEECCC-CCEEEEEC-CceEEEeCCCCeEEecc
Confidence 2 221110 0111222333333 56778776 56999999988776653
No 133
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=65.41 E-value=67 Score=27.71 Aligned_cols=115 Identities=10% Similarity=0.174 Sum_probs=59.9
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCC-CeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNL-VYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~-~~l~iW~l~~~~~~~ 283 (389)
-+|.+||.... ...|..+|+.+.++..+..+... . -..++.. +|+|++...... ..-.|++++..+ .
T Consensus 54 ~~g~l~~~~~~---~~~i~~~d~~~~~~~~~~~~~~~-----~-~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~--~ 122 (333)
T 2dg1_A 54 RQGQLFLLDVF---EGNIFKINPETKEIKRPFVSHKA-----N-PAAIKIHKDGRLFVCYLGDFKSTGGIFAATENG--D 122 (333)
T ss_dssp TTSCEEEEETT---TCEEEEECTTTCCEEEEEECSSS-----S-EEEEEECTTSCEEEEECTTSSSCCEEEEECTTS--C
T ss_pred CCCCEEEEECC---CCEEEEEeCCCCcEEEEeeCCCC-----C-cceEEECCCCcEEEEeCCCCCCCceEEEEeCCC--C
Confidence 36888887543 35799999998887765321111 1 1234443 788877765430 012345554322 1
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-------CcEEEEEeCCCCcEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-------~~~l~~yd~~~~~~~~v 337 (389)
.-... +.... ......-+++.++|. +++... ...++.||+++++.+.+
T Consensus 123 ~~~~~--~~~~~---~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 123 NLQDI--IEDLS---TAYCIDDMVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp SCEEE--ECSSS---SCCCEEEEEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEEEE--EccCc---cCCcccceEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 11111 11100 011233456666765 455443 24699999988777654
No 134
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=64.74 E-value=68 Score=31.69 Aligned_cols=124 Identities=16% Similarity=0.116 Sum_probs=62.8
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEECCCc--eeeee-CCCCcccc--CCCceEEEEEEeCCeEEEEEecCCCeEEEEE
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNLVAK--EFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFCFYNLVYVDMWM 275 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i-~~P~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~ 275 (389)
..++..+|.+|..+.. ..|.++|..+. .|+.- ..+..... ..+.....++..+|+|++..... . +..
T Consensus 71 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~dg--~--l~a 142 (677)
T 1kb0_A 71 ATPVVVDGIMYVSASW----SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWDG--R--LIA 142 (677)
T ss_dssp CCCEEETTEEEEECGG----GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTTS--E--EEE
T ss_pred eCCEEECCEEEEECCC----CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCCC--E--EEE
Confidence 4568899999987543 57999998764 46542 22211000 00001113455677776654321 2 344
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 276 MKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 276 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
|+-...+..|.... .............|+.. ++.|++... ++.++.||.+|++..+-
T Consensus 143 lD~~tG~~~W~~~~--~~~~~~~~~~~~~p~v~---~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 143 LDAATGKEVWHQNT--FEGQKGSLTITGAPRVF---KGKVIIGNGGAEYGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp EETTTCCEEEEEET--TTTCCSSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCCCCEEeeecC--CcCcCcCcccccCcEEE---CCEEEEEecccccCCCCEEEEEECCCCcEEEE
Confidence 44222245575431 10000000001234332 457777643 35799999999987654
No 135
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=64.52 E-value=85 Score=28.59 Aligned_cols=94 Identities=11% Similarity=0.120 Sum_probs=52.6
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|+.+.+... +..... ... .+.-. +|...+++.. +..+.+|-++. ...+..+....
T Consensus 290 ~~i~vwd~~~~~~~~~~~~~~~------~v~-~~~~~~~~~~l~sg~~-dg~i~vwd~~~------~~~~~~~~~h~--- 352 (464)
T 3v7d_B 290 NTLIVWDVAQMKCLYILSGHTD------RIY-STIYDHERKRCISASM-DTTIRIWDLEN------GELMYTLQGHT--- 352 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSS------CEE-EEEEETTTTEEEEEET-TSCEEEEETTT------TEEEEEECCCS---
T ss_pred CeEEEEECCCCcEEEEecCCCC------CEE-EEEEcCCCCEEEEEeC-CCcEEEEECCC------CcEEEEEeCCC---
Confidence 468899988765433 322211 111 23333 5665555544 44899998764 12344444321
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-+.+ +++.++....++.+.+||+++.+..
T Consensus 353 --~~v~~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 353 --ALVGLLRL--SDKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp --SCEEEEEE--CSSEEEEEETTSEEEEEETTTCCEE
T ss_pred --CcEEEEEE--cCCEEEEEeCCCcEEEEECCCCcee
Confidence 11222333 4677777777788999999987644
No 136
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=64.41 E-value=1.2e+02 Score=30.32 Aligned_cols=152 Identities=7% Similarity=0.054 Sum_probs=72.3
Q ss_pred EEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCcc
Q 036391 165 EVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSV 242 (389)
Q Consensus 165 ~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~ 242 (389)
.+..|+..++.++.....+... .......-.+++. +|. .|+++. ..|..+|..+.+|..+......
T Consensus 236 Gl~~~~~~~~~~~~~~~~~~~~-------~~l~~~~i~~i~~d~~g~-lWigt~----~Gl~~~~~~~~~~~~~~~~~~~ 303 (795)
T 4a2l_A 236 GLFLINPKTKEIKNYLHSPSNP-------KSISSNYIRSLAMDSQNR-LWIGTF----NDLNIYHEGTDSFASYSSNPVE 303 (795)
T ss_dssp CEEEEETTTTEEEEECCCTTCT-------TSCSCSBEEEEEECTTSC-EEEEES----SCEEEEETTTTEEEEECCCTTS
T ss_pred CeEEEeCCCCeEEEeecCCCCc-------cccCCCeEEEEEEcCCCC-EEEEeC----ChhheEcCCCCeEEEEecCCCC
Confidence 4667888888777654221000 0010011122333 455 566654 2689999999999887432211
Q ss_pred --ccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE
Q 036391 243 --NVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV 319 (389)
Q Consensus 243 --~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~ 319 (389)
..+..... .+.+ .+|.|.+..... .+..+..+ ...+..........-. ......-++...+| .|.+.+
T Consensus 304 ~~~l~~~~i~-~i~~D~~g~lWigt~~~--Gl~~~~~~----~~~~~~~~~~~~~~~l-~~~~V~~i~~d~~g-~lWiGt 374 (795)
T 4a2l_A 304 NGSLSQRSVR-SIFMDSQGGMWLGTYFG--GLNYYHPI----RNRFKNIRNIPYKNSL-SDNVVSCIVEDKDK-NLWIGT 374 (795)
T ss_dssp TTSCSSSCEE-EEEECTTSCEEEEESSS--CEEEECGG----GGSSEEECCCTTSSSC-SCSSEEEEEECTTS-CEEEEE
T ss_pred CCCCCCCcEE-EEEEeCCcCEEEEECCC--CeEEeCCC----cccceEEcCCCCCCCC-CCCeeEEEEECCCC-CEEEEE
Confidence 10022222 3333 367776655332 23222211 1223322111110000 01122333333344 577787
Q ss_pred cCcEEEEEeCCCCcEEEE
Q 036391 320 RREKLVWFDLETNSLRTV 337 (389)
Q Consensus 320 ~~~~l~~yd~~~~~~~~v 337 (389)
..+.|..||.++++++.+
T Consensus 375 ~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 375 NDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp SSSCEEEECTTTCCEEEE
T ss_pred CCCCeEEEcCCCCcEEEE
Confidence 766699999998887766
No 137
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=64.21 E-value=1.1e+02 Score=29.58 Aligned_cols=198 Identities=13% Similarity=0.044 Sum_probs=98.9
Q ss_pred cceEEEee-CCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 94 NGLIALCN-SVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 94 ~GLl~l~~-~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
++++.+.. ..+.+.|+|+.|++... +|.... ..++.+++..+ |-.+ .. ....+.+|+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~---------p~~v~~SpDGr-~lyv--~~--------~dg~V~viD~ 225 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA---------VHISRLSASGR-YLFV--IG--------RDGKVNMIDL 225 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSC---------EEEEEECTTSC-EEEE--EE--------TTSEEEEEET
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCC---------ccceEECCCCC-EEEE--Ec--------CCCeEEEEEC
Confidence 34554444 46789999999987653 443221 22556666433 3222 21 1236888888
Q ss_pred C--CCcEEEcccCCcccccccccccccccccCceee----ECCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCc-cc
Q 036391 172 K--INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL----AGGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDS-VN 243 (389)
Q Consensus 172 ~--~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~----~~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~-~~ 243 (389)
. ++ +.+...+.. .. ...-.+. -+|..-+.+.. ....+..+|..+.+-. .++.... ..
T Consensus 226 ~~~t~--~~v~~i~~G----------~~-P~~ia~s~~~~pDGk~l~v~n~--~~~~v~ViD~~t~~~~~~i~~~~~~~~ 290 (567)
T 1qks_A 226 WMKEP--TTVAEIKIG----------SE-ARSIETSKMEGWEDKYAIAGAY--WPPQYVIMDGETLEPKKIQSTRGMTYD 290 (567)
T ss_dssp TSSSC--CEEEEEECC----------SE-EEEEEECCSTTCTTTEEEEEEE--ETTEEEEEETTTCCEEEEEECCEECTT
T ss_pred CCCCC--cEeEEEecC----------CC-CceeEEccccCCCCCEEEEEEc--cCCeEEEEECCCCcEEEEEeccccccc
Confidence 5 43 222222210 00 0111122 15754444332 3457889998764433 3444321 10
Q ss_pred c--C--CCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEE
Q 036391 244 V--S--YANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLE 318 (389)
Q Consensus 244 ~--~--~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~ 318 (389)
. + .... ..+... ++..+++...... .||+.+- . .....++..|+... ..+.+++.++|..++..
T Consensus 291 ~~~~~p~~rv-a~i~~s~~~~~~vv~~~~~g--~v~~vd~-~-~~~~~~v~~i~~~~------~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 291 EQEYHPEPRV-AAILASHYRPEFIVNVKETG--KILLVDY-T-DLNNLKTTEISAER------FLHDGGLDGSHRYFITA 359 (567)
T ss_dssp TCCEESCCCE-EEEEECSSSSEEEEEETTTT--EEEEEET-T-CSSEEEEEEEECCS------SEEEEEECTTSCEEEEE
T ss_pred cccccCCCce-EEEEEcCCCCEEEEEecCCC--eEEEEec-C-CCccceeeeeeccc------cccCceECCCCCEEEEE
Confidence 0 0 0011 122222 3444555443332 4555553 2 12344555565433 24567788888887776
Q ss_pred Ec-CcEEEEEeCCCCcEEEE
Q 036391 319 VR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 319 ~~-~~~l~~yd~~~~~~~~v 337 (389)
.. ++++.++|++++++...
T Consensus 360 ~~~sn~V~ViD~~t~kl~~~ 379 (567)
T 1qks_A 360 ANARNKLVVIDTKEGKLVAI 379 (567)
T ss_dssp EGGGTEEEEEETTTTEEEEE
T ss_pred eCCCCeEEEEECCCCcEEEE
Confidence 53 56799999999987543
No 138
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=64.13 E-value=66 Score=27.24 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=55.2
Q ss_pred CCeEEEEccCCCCCcEEEEEECC-Ccee----eeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLV-AKEF----YQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHA 280 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~-~e~~----~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~ 280 (389)
+|.+++... ....|..||+. +.++ ..+...... -+ .++. .+|.|++.. ...+.+|-.+ +
T Consensus 182 dg~~lv~~~---~~~~i~~~~~~~~g~~~~~~~~~~~~~~~---p~----~i~~d~~G~l~v~~---~~~v~~~~~~--g 246 (296)
T 3e5z_A 182 SGNLLVSDT---GDNATHRYCLNARGETEYQGVHFTVEPGK---TD----GLRVDAGGLIWASA---GDGVHVLTPD--G 246 (296)
T ss_dssp TSCEEEEET---TTTEEEEEEECSSSCEEEEEEEECCSSSC---CC----SEEEBTTSCEEEEE---TTEEEEECTT--S
T ss_pred CCCEEEEeC---CCCeEEEEEECCCCcCcCCCeEeeCCCCC---CC----eEEECCCCCEEEEc---CCeEEEECCC--C
Confidence 577664422 33578899986 4444 122111111 01 1333 478887777 2355555432 2
Q ss_pred CCCCeEEEEEEcCCCCCCCcceeeeEEEE-eCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 281 VKESWTKLISVQEPTPTRSFLFLRPLGYS-RNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 281 ~~~~W~~~~~i~~~~~~~~~~~~~p~~~~-~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
. .+..+....- ..-+++. ++++.+++... ..++.++++++++++-
T Consensus 247 ---~--~~~~~~~~~~------~~~~~f~~~d~~~L~v~t~-~~l~~~~~~~~~~~~~ 292 (296)
T 3e5z_A 247 ---D--ELGRVLTPQT------TSNLCFGGPEGRTLYMTVS-TEFWSIETNVRGLEHH 292 (296)
T ss_dssp ---C--EEEEEECSSC------CCEEEEESTTSCEEEEEET-TEEEEEECSCCBCCC-
T ss_pred ---C--EEEEEECCCC------ceeEEEECCCCCEEEEEcC-CeEEEEEccccccccc
Confidence 2 2233333221 1234553 57777887765 5699999999988753
No 139
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=63.25 E-value=84 Score=28.10 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=52.0
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCC--
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPT-- 295 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~-- 295 (389)
..|..+|+.+.+... +..... . ..+... +|.+.+.+.. +..+.||-+... . .+..+....
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~-------v-~~~~~~~~~~~~l~~~s~-d~~v~iwd~~~~----~--~~~~~~~~~~~ 251 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIEDG-------V-TTVAVSPGDGKYIAAGSL-DRAVRVWDSETG----F--LVERLDSENES 251 (393)
T ss_dssp SEEEEEETTTTEEEEEEECSSC-------E-EEEEECSTTCCEEEEEET-TSCEEEEETTTC----C--EEEEEC-----
T ss_pred CcEEEEECCCCeeEEEEEcCCC-------c-EEEEEECCCCCEEEEEcC-CCcEEEEECCCC----c--EEEeecccccC
Confidence 578888988766543 222211 1 123332 6666655554 348999976531 1 222222110
Q ss_pred CCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 296 PTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 296 ~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
..+......-++++++|..++....++.+.+||+++.
T Consensus 252 ~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~ 288 (393)
T 1erj_A 252 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNA 288 (393)
T ss_dssp -CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---
T ss_pred CCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 0111123455777888888877777788999998764
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=62.79 E-value=75 Score=27.42 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=55.5
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecC----CCeEEEEEEeeCCCCCCeEEEEEEcCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYN----LVYVDMWMMKEHAVKESWTKLISVQEP 294 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~----~~~l~iW~l~~~~~~~~W~~~~~i~~~ 294 (389)
..|..+|+.+.+... +..+... . .+.-. +|...++.... ...+.+|.+........+.....-...
T Consensus 96 g~i~iwd~~~~~~~~~~~~~~~v-------~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~ 167 (369)
T 3zwl_B 96 YSIKLWDVSNGQCVATWKSPVPV-------K-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIH 167 (369)
T ss_dssp TEEEEEETTTCCEEEEEECSSCE-------E-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSE
T ss_pred CeEEEEECCCCcEEEEeecCCCe-------E-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceee
Confidence 468888887765433 3422221 1 22222 55555554433 148999999875432222221100000
Q ss_pred CCCCC--cceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 295 TPTRS--FLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 295 ~~~~~--~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
..... .....-++++++|..++....++.+..||+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 206 (369)
T 3zwl_B 168 KIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN 206 (369)
T ss_dssp EEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred eccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 00000 01245567778888888877778899999998
No 141
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=62.78 E-value=71 Score=27.13 Aligned_cols=70 Identities=20% Similarity=0.277 Sum_probs=47.4
Q ss_pred CeEEEEEecCCCeEEEEEEeeCC---CCCCeEEEEEEcCCCCCCCcceeeeEEEEeC--CCEEEEEEcCcEEEEEeCCCC
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHA---VKESWTKLISVQEPTPTRSFLFLRPLGYSRN--GVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~---~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~--g~~i~l~~~~~~l~~yd~~~~ 332 (389)
|.+.+.+.. +..+.||.++... ....|.....+.... ....-+.+.++ +..++....++.+..||++++
T Consensus 71 ~~~l~s~~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 71 GRIIASASY-DKTVKLWEEDPDQEECSGRRWNKLCTLNDSK-----GSLYSVKFAPAHLGLKLACLGNDGILRLYDALEP 144 (351)
T ss_dssp CSEEEEEET-TSCEEEEEECTTSCTTSSCSEEEEEEECCCS-----SCEEEEEECCGGGCSEEEEEETTCEEEEEECSST
T ss_pred CCEEEEEcC-CCeEEEEecCCCcccccccCcceeeeecccC-----CceeEEEEcCCCCCcEEEEecCCCcEEEecCCCh
Confidence 666665554 3489999998532 124577776665432 12455677777 888888777788999998876
Q ss_pred c
Q 036391 333 S 333 (389)
Q Consensus 333 ~ 333 (389)
+
T Consensus 145 ~ 145 (351)
T 3f3f_A 145 S 145 (351)
T ss_dssp T
T ss_pred H
Confidence 5
No 142
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=62.75 E-value=81 Score=27.76 Aligned_cols=182 Identities=12% Similarity=0.053 Sum_probs=87.9
Q ss_pred EEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcE
Q 036391 97 IALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSW 176 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W 176 (389)
++....+..+.+||..+++....-... ......+.+.+..+.-.++. .. ....+.+|+.+++..
T Consensus 169 l~t~s~D~~v~lwd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~g~~l~s-gs--------~Dg~v~~wd~~~~~~ 232 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQLLQSFHGH-------GADVLCLDLAPSETGNTFVS-GG--------CDKKAMVWDMRSGQC 232 (354)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECCCSSCCEEEE-EE--------TTSCEEEEETTTCCE
T ss_pred EEEEeCCCcEEEEeCCCCeEEEEEcCC-------CCCeEEEEEEeCCCCCEEEE-Ee--------CCCeEEEEECCCCcE
Confidence 333335678999999887654321111 11223344444332222222 21 233678888887754
Q ss_pred EEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEEEE
Q 036391 177 RRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDV 253 (389)
Q Consensus 177 ~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l 253 (389)
...- . .+. ..-.++.+ +|.....++ ....|-.+|+.+..-.. +...... .... .+
T Consensus 233 ~~~~--~----------~h~--~~v~~v~~~p~~~~l~s~s---~D~~v~lwd~~~~~~~~~~~~~~~~----~~~~-~~ 290 (354)
T 2pbi_B 233 VQAF--E----------THE--SDVNSVRYYPSGDAFASGS---DDATCRLYDLRADREVAIYSKESII----FGAS-SV 290 (354)
T ss_dssp EEEE--C----------CCS--SCEEEEEECTTSSEEEEEE---TTSCEEEEETTTTEEEEEECCTTCC----SCEE-EE
T ss_pred EEEe--c----------CCC--CCeEEEEEeCCCCEEEEEe---CCCeEEEEECCCCcEEEEEcCCCcc----ccee-EE
Confidence 3211 1 000 00112222 344333332 23468888987764332 2222111 0111 22
Q ss_pred EE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEe
Q 036391 254 GS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 328 (389)
Q Consensus 254 ~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd 328 (389)
.- .+|.+.+++.. +..+.||-+... ..+..+... .....-++++++|..++-...++.+.+||
T Consensus 291 ~~s~~g~~l~~g~~-d~~i~vwd~~~~------~~~~~l~~h-----~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 291 DFSLSGRLLFAGYN-DYTINVWDVLKG------SRVSILFGH-----ENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSEEEEEET-TSCEEEEETTTC------SEEEEECCC-----SSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEeCCCCEEEEEEC-CCcEEEEECCCC------ceEEEEECC-----CCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 22 36776666554 448999987531 123333221 11345677888888777776677777764
No 143
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=62.51 E-value=68 Score=26.83 Aligned_cols=196 Identities=12% Similarity=0.101 Sum_probs=98.5
Q ss_pred EEeeecceEEEeeC-CceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+....+|-+.+... ...+.++||. ++...++.+.. .....++.+++.. . +. +... ....+.
T Consensus 20 i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~------~~~~~~i~~~~~g-~--l~-v~~~-------~~~~i~ 81 (299)
T 2z2n_A 20 ITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTP------DAKVMCLTISSDG-E--VW-FTEN-------AANKIG 81 (299)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSST------TCCEEEEEECTTS-C--EE-EEET-------TTTEEE
T ss_pred eEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcc------cCceeeEEECCCC-C--EE-EeCC-------CCCeEE
Confidence 44455677666654 5679999998 77766543321 1223456666532 2 22 2211 122456
Q ss_pred EEEcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccC
Q 036391 168 VYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVS 245 (389)
Q Consensus 168 Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 245 (389)
+|+.. +..+... .+. .. ....++.+ +|.+|.... ....|..+|+ +.+...+..|....
T Consensus 82 ~~~~~-g~~~~~~-~~~----------~~--~~~~~i~~~~~g~l~v~~~---~~~~i~~~d~-~g~~~~~~~~~~~~-- 141 (299)
T 2z2n_A 82 RITKK-GIIKEYT-LPN----------PD--SAPYGITEGPNGDIWFTEM---NGNRIGRITD-DGKIREYELPNKGS-- 141 (299)
T ss_dssp EECTT-SCEEEEE-CSS----------TT--CCEEEEEECTTSCEEEEET---TTTEEEEECT-TCCEEEEECSSTTC--
T ss_pred EECCC-CcEEEEe-CCC----------cC--CCceeeEECCCCCEEEEec---CCceEEEECC-CCCEEEecCCCCCC--
Confidence 66664 4454432 110 00 11123333 577766532 2357999999 66666665553221
Q ss_pred CCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcE
Q 036391 246 YANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REK 323 (389)
Q Consensus 246 ~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~ 323 (389)
. ...++.. +|.|++...... . |++++.. ...... .+.. . .....-+++.++|. +++... ...
T Consensus 142 --~-~~~i~~~~~g~l~v~~~~~~-~--i~~~~~~---g~~~~~-~~~~-~----~~~~~~i~~~~~g~-l~v~~~~~~~ 205 (299)
T 2z2n_A 142 --Y-PSFITLGSDNALWFTENQNN-A--IGRITES---GDITEF-KIPT-P----ASGPVGITKGNDDA-LWFVEIIGNK 205 (299)
T ss_dssp --C-EEEEEECTTSCEEEEETTTT-E--EEEECTT---CCEEEE-ECSS-T----TCCEEEEEECTTSS-EEEEETTTTE
T ss_pred --C-CceEEEcCCCCEEEEeCCCC-E--EEEEcCC---CcEEEe-eCCC-C----CCcceeEEECCCCC-EEEEccCCce
Confidence 1 1234444 788877654322 3 4444431 233221 1111 1 11123355556665 555543 567
Q ss_pred EEEEeCCCCcEEEEEE
Q 036391 324 LVWFDLETNSLRTVKI 339 (389)
Q Consensus 324 l~~yd~~~~~~~~v~~ 339 (389)
+..||+ ++++..+..
T Consensus 206 i~~~~~-~g~~~~~~~ 220 (299)
T 2z2n_A 206 IGRITT-SGEITEFKI 220 (299)
T ss_dssp EEEECT-TCCEEEEEC
T ss_pred EEEECC-CCcEEEEEC
Confidence 999999 777766533
No 144
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=61.88 E-value=77 Score=27.24 Aligned_cols=107 Identities=11% Similarity=0.130 Sum_probs=58.3
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKES 284 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~ 284 (389)
-+|.+||... ....|..||+.++.-..+..+... ..++.. +|+|+++..... ...|++++.. ...
T Consensus 41 ~~g~lyv~d~---~~~~I~~~d~~g~~~~~~~~~~~p--------~gia~~~dG~l~vad~~~~-~~~v~~~d~~--~g~ 106 (306)
T 2p4o_A 41 PDGTIFVTNH---EVGEIVSITPDGNQQIHATVEGKV--------SGLAFTSNGDLVATGWNAD-SIPVVSLVKS--DGT 106 (306)
T ss_dssp TTSCEEEEET---TTTEEEEECTTCCEEEEEECSSEE--------EEEEECTTSCEEEEEECTT-SCEEEEEECT--TSC
T ss_pred CCCCEEEEeC---CCCeEEEECCCCceEEEEeCCCCc--------eeEEEcCCCcEEEEeccCC-cceEEEEcCC--CCe
Confidence 3689998743 245799999987654444544322 134443 788877664422 3456666532 234
Q ss_pred eEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeCCCCc
Q 036391 285 WTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNS 333 (389)
Q Consensus 285 W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~~~~~ 333 (389)
...+..+... ....-++.+. +..+++.. ..+.++.+|+.+++
T Consensus 107 ~~~~~~~~~~------~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~ 149 (306)
T 2p4o_A 107 VETLLTLPDA------IFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPS 149 (306)
T ss_dssp EEEEEECTTC------SCEEEEEESS-SSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEEEeCCCc------cccCcccccC-CCcEEEEECCCCeEEEEeCCCCc
Confidence 4444333211 1112233343 44555554 35679999998764
No 145
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=61.63 E-value=85 Score=27.63 Aligned_cols=67 Identities=10% Similarity=0.134 Sum_probs=43.6
Q ss_pred CCeEEEEEecCCCe-EEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCc
Q 036391 257 EGCLCVFCFYNLVY-VDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 257 ~G~L~~~~~~~~~~-l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~ 333 (389)
+|.+.+.+..+. . +.||-+.. ...+..+...... ....-++++++|..++....++.+.+||+++..
T Consensus 206 ~g~~l~s~s~d~-~~v~iwd~~~------~~~~~~~~~g~h~---~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 206 KSDMVATCSQDG-TIIRVFKTED------GVLVREFRRGLDR---ADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp TSSEEEEEETTC-SEEEEEETTT------CCEEEEEECTTCC---SCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCEEEEEeCCC-CEEEEEECCC------CcEEEEEEcCCCC---CcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 677666555544 6 99998774 2344555421011 134567888898888777777889999998754
No 146
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=61.22 E-value=1.4e+02 Score=30.10 Aligned_cols=161 Identities=15% Similarity=0.054 Sum_probs=84.4
Q ss_pred eEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCC
Q 036391 164 VEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPD 240 (389)
Q Consensus 164 ~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~ 240 (389)
..++++++....-+.+.... + ....++.+ +|.|||.... ....|..+++....-..+-. .
T Consensus 493 ~~I~v~~ldG~~~~~l~~~~------------l--~~P~gIaVDp~~g~LYwtD~g--~~~~I~~~~~dG~~~~~lv~-~ 555 (791)
T 3m0c_C 493 GTVSVADTKGVKRKTLFREN------------G--SKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLNGVDIYSLVT-E 555 (791)
T ss_dssp TEEEEEETTSSSEEEEEECT------------T--CCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCCEEEEEC-S
T ss_pred CeEEEEeCCCCeEEEEEeCC------------C--CCcceEEEecCCCCEEEecCC--CCCeEEEEecCCCceEEEEe-C
Confidence 46788888765544442111 0 11234554 5899997532 22579999997654444321 1
Q ss_pred ccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc
Q 036391 241 SVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 320 (389)
Q Consensus 241 ~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~ 320 (389)
.. .....+.+-..+|+||++.... -.||+.+-.| ......+ .... ....|+++...++.||+...
T Consensus 556 ~l---~~P~GLavD~~~~~LYwaD~~~---~~I~~~d~dG-~~~~~v~---~~~~-----~l~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 556 NI---QWPNGITLDLLSGRLYWVDSKL---HSISSIDVNG-GNRKTIL---EDEK-----RLAHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp SC---SCEEEEEEETTTTEEEEEETTT---TEEEEEETTS-CSCEEEE---ECTT-----TTSSEEEEEEETTEEEEEET
T ss_pred CC---CCceEEEEecCCCeEEEEeCCC---CcEEEEecCC-CceEEEe---cCCC-----ccCCCCEEEEeCCEEEEEEC
Confidence 11 1111222233488999886543 2467766433 2333222 1111 12356677666677877654
Q ss_pred -CcEEEEEeCCCCcEEEEEEecCCCC-ceeeEEEEecccc
Q 036391 321 -REKLVWFDLETNSLRTVKIDTHGLD-FVDTEICMASLVP 358 (389)
Q Consensus 321 -~~~l~~yd~~~~~~~~v~~~~~g~~-~~~~~~y~~Sl~~ 358 (389)
...+..+|..+++-..+-. .+.. -+...+|.+..-|
T Consensus 621 ~~~~I~~~dk~tG~~~~~l~--~~l~~P~~i~v~h~~~Qp 658 (791)
T 3m0c_C 621 INEAIFSANRLTGSDVNLLA--ENLLSPEDMVLFHNLTQP 658 (791)
T ss_dssp TTTEEEEEETTTCCCCEEEE--CSCSCCCCEEEESGGGSC
T ss_pred CCCEEEEEeCCCCcceEEee--cCCCCceeEeeeccccCC
Confidence 4578999977765433323 3433 3445556555433
No 147
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=60.49 E-value=94 Score=27.76 Aligned_cols=201 Identities=13% Similarity=0.094 Sum_probs=96.0
Q ss_pred ecce-EEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 93 CNGL-IALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 93 ~~GL-l~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
.+|- ++....+..+.|||..+++....-... ......+.+.+... + ++ ... ....+.+++.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h-------~~~v~~~~~~p~~~-~-l~-s~s--------~d~~v~iwd~ 194 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRKIVMILQGH-------EQDIYSLDYFPSGD-K-LV-SGS--------GDRTVRIWDL 194 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTSS-E-EE-EEE--------TTSEEEEEET
T ss_pred CCCCEEEEEcCCCeEEEEECCCCcEEEEEccC-------CCCEEEEEEcCCCC-E-EE-Eec--------CCCcEEEEEC
Confidence 3553 443445678999999888765432211 12244566665432 2 22 221 2346888888
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCC
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYA 247 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~ 247 (389)
+++.-...-... .....+.+ +|.+...+.. ...|..+|+.+..... +..+......+.
T Consensus 195 ~~~~~~~~~~~~---------------~~v~~~~~~~~~~~~l~~~s~---d~~v~iwd~~~~~~~~~~~~~~~~~~~h~ 256 (393)
T 1erj_A 195 RTGQCSLTLSIE---------------DGVTTVAVSPGDGKYIAAGSL---DRAVRVWDSETGFLVERLDSENESGTGHK 256 (393)
T ss_dssp TTTEEEEEEECS---------------SCEEEEEECSTTCCEEEEEET---TSCEEEEETTTCCEEEEEC------CCCS
T ss_pred CCCeeEEEEEcC---------------CCcEEEEEECCCCCEEEEEcC---CCcEEEEECCCCcEEEeecccccCCCCCC
Confidence 877543221111 00011111 4544433332 2468888987765432 322211100011
Q ss_pred ceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCC------CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc
Q 036391 248 NVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKE------SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR 320 (389)
Q Consensus 248 ~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~------~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~ 320 (389)
..-..+.-. +|.+.+.+.. +..+.+|-+....... .......+.. ......-+++.++|..++-...
T Consensus 257 ~~v~~v~~~~~g~~l~s~s~-d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~sgs~ 330 (393)
T 1erj_A 257 DSVYSVVFTRDGQSVVSGSL-DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIG-----HKDFVLSVATTQNDEYILSGSK 330 (393)
T ss_dssp SCEEEEEECTTSSEEEEEET-TSEEEEEEC---------------CEEEEEEC-----CSSCEEEEEECGGGCEEEEEET
T ss_pred CCEEEEEECCCCCEEEEEeC-CCEEEEEECCCCCCcccccCCCCCcceEEEec-----ccCcEEEEEECCCCCEEEEEeC
Confidence 111233333 6666555443 4489999987532110 0111111111 1112344677778877777777
Q ss_pred CcEEEEEeCCCCcEE
Q 036391 321 REKLVWFDLETNSLR 335 (389)
Q Consensus 321 ~~~l~~yd~~~~~~~ 335 (389)
++.+..||.++++..
T Consensus 331 D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 331 DRGVLFWDKKSGNPL 345 (393)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCeEE
Confidence 788999999988754
No 148
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=60.39 E-value=89 Score=27.50 Aligned_cols=69 Identities=12% Similarity=0.088 Sum_probs=41.0
Q ss_pred EEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCC-CCCCCcceeeeEEEEeCCCEEEEEEcC---cEEEEEeCCCCcEE
Q 036391 261 CVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEP-TPTRSFLFLRPLGYSRNGVKLLLEVRR---EKLVWFDLETNSLR 335 (389)
Q Consensus 261 ~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~-~~~~~~~~~~p~~~~~~g~~i~l~~~~---~~l~~yd~~~~~~~ 335 (389)
.++.......+.+|-+... ..+..+... ..........-++++++|..++....+ +.+..||+++++..
T Consensus 199 ~l~~~~~dg~i~i~d~~~~------~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 199 LIATGFNNGTVQISELSTL------RPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERI 271 (397)
T ss_dssp EEEEECTTSEEEEEETTTT------EEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred eEEEEeCCCcEEEEECCCC------ceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccc
Confidence 4444455558999988741 233333320 000001124567777888888877666 78999999887643
No 149
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=60.28 E-value=80 Score=26.89 Aligned_cols=111 Identities=17% Similarity=0.213 Sum_probs=57.3
Q ss_pred CCe-EEEEccCCCCCcEEEEEECCCceee-eeCCCCccccCCCceEEEEEEe-CC-eEEEEEec----------CCCeEE
Q 036391 207 GGA-LHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVSYANVHVDVGSL-EG-CLCVFCFY----------NLVYVD 272 (389)
Q Consensus 207 ~G~-lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~-~G-~L~~~~~~----------~~~~l~ 272 (389)
+|. +|.... ....|..+|+.+.+.. .++.+.......... .+... +| .|++.... ....+.
T Consensus 44 dg~~l~v~~~---~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 44 GGRIAYATVN---KSESLVKIDLVTGETLGRIDLSTPEERVKSLF--GAALSPDGKTLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp TSSEEEEEET---TTTEEEEEETTTCCEEEEEECCBTTEEEECTT--CEEECTTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred CCCEEEEEeC---CCCeEEEEECCCCCeEeeEEcCCccccccccc--ceEECCCCCEEEEEecccccccccccccCceEE
Confidence 564 444332 2357999999876653 355543100000011 12222 55 44444311 123666
Q ss_pred EEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 273 MWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 273 iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
+|-++. . ..+..+.... ...-++++++|+.+++. +..+..||+++++...
T Consensus 119 v~d~~~----~--~~~~~~~~~~------~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 119 LYDAET----L--SRRKAFEAPR------QITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVE 168 (337)
T ss_dssp EEETTT----T--EEEEEEECCS------SCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEE
T ss_pred EEECCC----C--cEEEEEeCCC------CcceeEECCCCCEEEEe--CCeEEEEECCCCcEee
Confidence 666542 1 2233333321 12345677888877776 4569999999987653
No 150
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=60.23 E-value=93 Score=27.63 Aligned_cols=198 Identities=12% Similarity=0.061 Sum_probs=94.1
Q ss_pred EEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC--
Q 036391 97 IALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN-- 174 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~-- 174 (389)
++-...+..+.+||..+++....-.... ..........+.+.+..+.+ +.... ....+.+|+.+..
T Consensus 173 l~s~s~D~~i~~wd~~~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~--l~sgs--------~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 173 LITGSGDQTCVLWDVTTGQRISIFGSEF--PSGHTADVLSLSINSLNANM--FISGS--------CDTTVRLWDLRITSR 240 (380)
T ss_dssp EEEECTTSCEEEECTTTCCEEEEECCCS--SSSCCSCEEEEEECSSSCCE--EEEEE--------TTSCEEEEETTTTCC
T ss_pred EEEECCCCcEEEEEcCCCcEEEEeeccc--CCCCccCeEEEEeecCCCCE--EEEEE--------CCCeEEEEECCCCCc
Confidence 4434456789999999987665332221 01112233445554433332 22221 2335778887632
Q ss_pred cEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccCCCceEE
Q 036391 175 SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHV 251 (389)
Q Consensus 175 ~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~ 251 (389)
.-+.... +. ..-.++.+ +|.....++ ....|-.+|+.+..... +.............-.
T Consensus 241 ~~~~~~~-------------h~--~~v~~v~~~p~~~~l~s~s---~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~ 302 (380)
T 3iz6_a 241 AVRTYHG-------------HE--GDINSVKFFPDGQRFGTGS---DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVT 302 (380)
T ss_dssp CCEEECC-------------CS--SCCCEEEECTTSSEEEEEC---SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCS
T ss_pred ceEEECC-------------cC--CCeEEEEEecCCCeEEEEc---CCCeEEEEECCCCcEEEEecccccccccccCceE
Confidence 1111110 00 00112222 444333322 23568889998765433 3332221100001111
Q ss_pred EEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC
Q 036391 252 DVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE 330 (389)
Q Consensus 252 ~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~ 330 (389)
.+.- .+|.+.+++.. +..+.||-+... .....+... ..+......-++++++|..++-...++.+..||+.
T Consensus 303 ~~~~s~~g~~l~~g~~-dg~i~vwd~~~~------~~~~~~~~~-~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 303 SVAFSISGRLLFAGYS-NGDCYVWDTLLA------EMVLNLGTL-QNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEEECSSSSEEEEECT-TSCEEEEETTTC------CEEEEECCS-CSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred EEEECCCCCEEEEEEC-CCCEEEEECCCC------ceEEEEecc-cCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 2222 36776666544 448999976531 122223210 01111224557888899887776667779999987
Q ss_pred CC
Q 036391 331 TN 332 (389)
Q Consensus 331 ~~ 332 (389)
+.
T Consensus 375 ~~ 376 (380)
T 3iz6_a 375 GH 376 (380)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 151
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=60.19 E-value=92 Score=27.59 Aligned_cols=191 Identities=10% Similarity=0.031 Sum_probs=96.3
Q ss_pred cceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCC
Q 036391 94 NGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKI 173 (389)
Q Consensus 94 ~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~ 173 (389)
.+.+++.. ...+...++-+.+...+... .....++.+|+..+. +++... ....+..++...
T Consensus 44 ~~~ll~~~-~~~I~~i~~~g~~~~~~~~~--------~~~~~~l~~d~~~~~--ly~~D~--------~~~~I~r~~~~g 104 (349)
T 3v64_C 44 EPVLLFAN-RIDIRQVLPHRSEYTLLLNN--------LENAIALDFHHRREL--VFWSDV--------TLDRILRANLNG 104 (349)
T ss_dssp CCEEEEEC-BSCEEEECTTSCCEEEEECS--------CSCEEEEEEETTTTE--EEEEET--------TTTEEEEEETTS
T ss_pred CceeEeec-ccceEEEeCCCCeeEEeecC--------CCceEEEEEeccccE--EEEEec--------cCCceEEEecCC
Confidence 45555553 34566777766555443221 112567888865543 333211 223566777766
Q ss_pred CcEEEcccCCcccccccccccccccccCceee---ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceE
Q 036391 174 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL---AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVH 250 (389)
Q Consensus 174 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~---~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 250 (389)
..-+.+.... . ....++. .+|.+||... ....|.++|+....-..+. ..... . .
T Consensus 105 ~~~~~~~~~~------------~--~~p~glavd~~~g~ly~~d~---~~~~I~~~~~dG~~~~~l~-~~~l~---~--P 161 (349)
T 3v64_C 105 SNVEEVVSTG------------L--ESPGGLAVDWVHDKLYWTDS---GTSRIEVANLDGAHRKVLL-WQSLE---K--P 161 (349)
T ss_dssp CSCEEEECSS------------C--SCCCEEEEETTTTEEEEEET---TTTEEEEEETTSCSCEEEE-CTTCS---C--E
T ss_pred CCceEEEeCC------------C--CCccEEEEecCCCeEEEEcC---CCCeEEEEcCCCCceEEEE-eCCCC---C--c
Confidence 5443332111 0 1112333 3689999854 3458999998765433332 11111 1 1
Q ss_pred EEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEE
Q 036391 251 VDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWF 327 (389)
Q Consensus 251 ~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~y 327 (389)
..++.. +|.|++..... .-.|++.+-.+. .. . .+-... .....-+++.++++.|++... ..++..+
T Consensus 162 ~~iavdp~~g~ly~td~~~--~~~I~r~~~dG~-~~--~--~~~~~~----~~~PnGla~d~~~~~lY~aD~~~~~I~~~ 230 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDWGN--TPRIEASSMDGS-GR--R--IIADTH----LFWPNGLTIDYAGRRMYWVDAKHHVIERA 230 (349)
T ss_dssp EEEEEETTTTEEEEEECSS--SCEEEEEETTSC-SC--E--ESCCSS----CSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceEEEecCcCeEEEeccCC--CCEEEEEeCCCC-Cc--E--EEEECC----CCCcceEEEeCCCCEEEEEECCCCEEEEE
Confidence 234444 78888776543 234566553331 11 1 111011 111233555555677777654 3578889
Q ss_pred eCCCCcEEEE
Q 036391 328 DLETNSLRTV 337 (389)
Q Consensus 328 d~~~~~~~~v 337 (389)
|+++...+.+
T Consensus 231 ~~dG~~~~~~ 240 (349)
T 3v64_C 231 NLDGSHRKAV 240 (349)
T ss_dssp ETTSCSCEEE
T ss_pred eCCCCceEEE
Confidence 9887655544
No 152
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=59.75 E-value=78 Score=27.37 Aligned_cols=153 Identities=15% Similarity=0.206 Sum_probs=0.0
Q ss_pred EEeee-cceEEEeeCC------------------ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEE
Q 036391 89 VLGSC-NGLIALCNSV------------------QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLV 149 (389)
Q Consensus 89 ~~~s~-~GLl~l~~~~------------------~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv 149 (389)
+.... +|-+.+.+.. ..++++||.+++...+... .....++.+++..+..-|.
T Consensus 131 i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--------~~~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 131 VTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--------LHVPGGAEVSADSSFVLVA 202 (322)
T ss_dssp EEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--------ESCCCEEEECTTSSEEEEE
T ss_pred EEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC--------CccCcceEECCCCCEEEEE
Q ss_pred EEEEEeCCCCCCceeEEEEEEcCC---CcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCC--------C
Q 036391 150 RVLHFKGNDGEDVEVEVEVYSLKI---NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS--------S 218 (389)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~Vyss~~---~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~--------~ 218 (389)
-. ....+.+|+..+ +..+.....+ . ...-.+--+|. +|++... .
T Consensus 203 d~----------~~~~I~~~~~~~~~~~~~~~~~~~~----------g----P~gi~~d~~G~-l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 203 EF----------LSHQIVKYWLEGPKKGTAEVLVKIP----------N----PGNIKRNADGH-FWVSSSEELDGNMHGR 257 (322)
T ss_dssp EG----------GGTEEEEEESSSTTTTCEEEEEECS----------S----EEEEEECTTSC-EEEEEEEETTSSTTSC
T ss_pred eC----------CCCeEEEEECCCCcCCccceEEeCC----------C----CCCeEECCCCC-EEEEecCcccccccCC
Q ss_pred CCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEee
Q 036391 219 TRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKE 278 (389)
Q Consensus 219 ~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~ 278 (389)
....|..||...+....+..|... .-.....+...+|.|++...... .+.+..++.
T Consensus 258 ~~~~v~~~d~~G~~~~~~~~~~g~---~~~~~~~~~~~~g~L~v~~~~~~-~i~~~~~~~ 313 (322)
T 2fp8_A 258 VDPKGIKFDEFGNILEVIPLPPPF---AGEHFEQIQEHDGLLYIGTLFHG-SVGILVYDK 313 (322)
T ss_dssp EEEEEEEECTTSCEEEEEECCTTT---TTSCCCEEEEETTEEEEECSSCS-EEEEEEC--
T ss_pred CccEEEEECCCCCEEEEEECCCCC---ccccceEEEEeCCEEEEeecCCC-ceEEEeccc
No 153
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=59.51 E-value=63 Score=28.10 Aligned_cols=73 Identities=14% Similarity=0.147 Sum_probs=44.1
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
+|.+.+.+.. +..+.||.+.+.+ ..+..+..+.... ....-+.+++++..++-...++.+..||..++.++.
T Consensus 118 ~g~~las~s~-D~~v~iwd~~~~~--~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~ 189 (330)
T 2hes_X 118 DGYYLATCSR-DKSVWIWETDESG--EEYECISVLQEHS-----QDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWEC 189 (330)
T ss_dssp TSCEEEEEET-TSCEEEEECCTTC--CCCEEEEEECCCS-----SCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEE
T ss_pred CCCEEEEEeC-CCEEEEEeccCCC--CCeEEEEEeccCC-----CceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeE
Confidence 4554444333 4489999986432 3455555544321 124456777788877766666778888887776554
Q ss_pred E
Q 036391 337 V 337 (389)
Q Consensus 337 v 337 (389)
+
T Consensus 190 ~ 190 (330)
T 2hes_X 190 V 190 (330)
T ss_dssp E
T ss_pred E
Confidence 4
No 154
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=59.29 E-value=87 Score=27.00 Aligned_cols=68 Identities=10% Similarity=0.073 Sum_probs=40.8
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
|.+.+++.. +..+.+|.++... ........+..... .....-++++++|..++....++.+..||+.+
T Consensus 299 ~~~l~~~~~-dg~i~vwd~~~~~--~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 299 QKMLALGNQ-VGKLYVWDLEVED--PHKAKCTTLTHHKC---GAAIRQTSFSRDSSILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SSEEEEECT-TSCEEEEECCSSS--GGGCEEEEECCTTC---CSCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CcEEEEEec-CCcEEEEECCCCC--CccccceEEccccc---CCceEEEEeCCCCCeEEEEeCCCEEEEEEecC
Confidence 665555543 4489999998532 11223333433210 11245577788888888887788899999864
No 155
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=59.27 E-value=1e+02 Score=27.78 Aligned_cols=65 Identities=14% Similarity=0.175 Sum_probs=40.3
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
|.+.+.+. .+..+.||-+... ..+..+.... ....-++++++|..++-...++.+.+||.++++.
T Consensus 308 g~~l~sgs-~D~~i~iwd~~~~------~~~~~~~~h~-----~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 308 GPFLLSGS-RDKTIKMWDVSTG------MCLMTLVGHD-----NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp CCEEEEEE-TTSEEEEEETTTT------EEEEEEECCS-----SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CCEEEEEe-CCCeEEEEECCCC------ceEEEEECCC-----CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 44444444 3458999987631 2233333211 1244567788888877777778899999988653
No 156
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=58.61 E-value=1e+02 Score=27.67 Aligned_cols=102 Identities=12% Similarity=0.094 Sum_probs=53.6
Q ss_pred CcEEEEEECCCcee-eeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC
Q 036391 220 RSVIMAFNLVAKEF-YQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT 297 (389)
Q Consensus 220 ~~~il~fD~~~e~~-~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 297 (389)
...|..+|+.+.+. ..+..|... ... ..+... +|.+.+++.. +..+.||-+.. ...+..+.....
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~----~~v-~~~~~s~~~~~l~s~~~-dg~i~iwd~~~------~~~~~~~~~~~~- 257 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRH----GAV-SSICIDEECCVLILGTT-RGIIDIWDIRF------NVLIRSWSFGDH- 257 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGG----CCE-EEEEECTTSCEEEEEET-TSCEEEEETTT------TEEEEEEBCTTC-
T ss_pred CCeEEEEeCCCCeeeEEEccCCCC----Cce-EEEEECCCCCEEEEEcC-CCeEEEEEcCC------ccEEEEEecCCC-
Confidence 35799999987654 334444222 111 123333 5666555544 34899998874 123333332110
Q ss_pred CCcceeeeEEEE----eCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 298 RSFLFLRPLGYS----RNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 298 ~~~~~~~p~~~~----~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
....-+++. ++|..++....++.+.+||+++++....
T Consensus 258 ---~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 258 ---APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp ---EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEE
T ss_pred ---CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEE
Confidence 012223222 3444555454566799999998875544
No 157
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=58.35 E-value=91 Score=27.27 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=16.7
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCc
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAK 231 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e 231 (389)
+|.+||.-. ....|..+++.+.
T Consensus 46 ~~~lyw~D~---~~~~I~r~~~~g~ 67 (318)
T 3sov_A 46 HGLIYWSDV---SEEAIKRTEFNKT 67 (318)
T ss_dssp GTEEEEEET---TTTEEEEEETTSS
T ss_pred CCEEEEEEC---CCCcEEEEEccCC
Confidence 589999843 3468999998765
No 158
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=58.01 E-value=1.9e+02 Score=30.49 Aligned_cols=198 Identities=9% Similarity=0.035 Sum_probs=93.8
Q ss_pred cc-eEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NG-LIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~G-Ll~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+| +++....++.+.|||..|++...--... ......+.+.+..+...++. .. ....+.+|+..
T Consensus 668 ~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~s-g~--------~d~~v~vwd~~ 731 (1249)
T 3sfz_A 668 DDSYIATCSADKKVKIWDSATGKLVHTYDEH-------SEQVNCCHFTNKSNHLLLAT-GS--------NDFFLKLWDLN 731 (1249)
T ss_dssp TSSEEEEEETTSEEEEEETTTCCEEEEEECC-------SSCEEEEEECSSSSCCEEEE-EE--------TTSCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEcCC-------CCcEEEEEEecCCCceEEEE-Ee--------CCCeEEEEECC
Confidence 44 4444445678999999988755422111 11234455555444433332 21 23357788887
Q ss_pred CCcEEEc-ccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCccccC-----
Q 036391 173 INSWRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNVS----- 245 (389)
Q Consensus 173 ~~~W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~~----- 245 (389)
++.-... .... .....-...-+|.....++ ....|..+|+.+..... +..+......
T Consensus 732 ~~~~~~~~~~h~-------------~~v~~~~~sp~~~~l~s~s---~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1249)
T 3sfz_A 732 QKECRNTMFGHT-------------NSVNHCRFSPDDELLASCS---ADGTLRLWDVRSANERKSINVKRFFLSSEDPPE 795 (1249)
T ss_dssp SSSEEEEECCCS-------------SCEEEEEECSSTTEEEEEE---SSSEEEEEEGGGTEEEEEEECCCCC--------
T ss_pred CcchhheecCCC-------------CCEEEEEEecCCCEEEEEE---CCCeEEEEeCCCCcccceecccccccccCCccc
Confidence 7653321 1101 0000001112344332222 23468888887654322 2222110000
Q ss_pred --CCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcE
Q 036391 246 --YANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREK 323 (389)
Q Consensus 246 --~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~ 323 (389)
..........-+|...++... ..+.+|.+... .. ...+.... .....-+.++++|..++....++.
T Consensus 796 ~~~~~v~~~~~s~dg~~l~~~~~--~~v~~~d~~~~----~~--~~~~~~~~----~~~v~~~~~sp~~~~l~~~~~dg~ 863 (1249)
T 3sfz_A 796 DVEVIVKCCSWSADGDKIIVAAK--NKVLLFDIHTS----GL--LAEIHTGH----HSTIQYCDFSPYDHLAVIALSQYC 863 (1249)
T ss_dssp CCCCCBCCCCBCTTSSEEEEEET--TEEEEEETTTC----CE--EEEEECSS----SSCCCEEEECSSTTEEEEECSSSC
T ss_pred cccceEEEEEECCCCCEEEEEcC--CcEEEEEecCC----Cc--eeEEcCCC----CCceEEEEEcCCCCEEEEEeCCCe
Confidence 000000011225555555442 37778876641 12 22222111 112455677788888887777777
Q ss_pred EEEEeCCCCcEE
Q 036391 324 LVWFDLETNSLR 335 (389)
Q Consensus 324 l~~yd~~~~~~~ 335 (389)
+..||..++...
T Consensus 864 v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 864 VELWNIDSRLKV 875 (1249)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEEcCCCcee
Confidence 999999887543
No 159
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=57.91 E-value=1.5e+02 Score=29.18 Aligned_cols=116 Identities=11% Similarity=0.121 Sum_probs=64.1
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCc---eeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAK---EFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVK 282 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e---~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~ 282 (389)
-++.+|+.+..+.....|+..|+.+. .|+.+. |... +. . .+...++.|.+...... .-.|++++-.
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~----~~-~-~~s~~g~~lv~~~~~~g-~~~l~~~d~~--- 358 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI-PERQ----QV-L-TVHSGSGYLFAEYMVDA-TARVEQFDYE--- 358 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE-CCCS----SC-E-EEEEETTEEEEEEEETT-EEEEEEECTT---
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe-cCCC----CE-E-EEEEECCEEEEEEEECC-eeEEEEEECC---
Confidence 45778887765334578999999863 366542 2221 11 2 45555667766654432 3445555432
Q ss_pred CCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----cEEEEEeCCCCcEEEEE
Q 036391 283 ESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRTVK 338 (389)
Q Consensus 283 ~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----~~l~~yd~~~~~~~~v~ 338 (389)
..+. ..+..+.. .....+...++++.+++...+ ..++.||+++++.+.+.
T Consensus 359 g~~~--~~l~~p~~----~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~ 412 (693)
T 3iuj_A 359 GKRV--REVALPGL----GSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYR 412 (693)
T ss_dssp SCEE--EEECCSSS----SEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEE
T ss_pred CCee--EEeecCCC----ceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEE
Confidence 2232 33433211 012222333467777776544 57999999998877664
No 160
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=57.78 E-value=80 Score=31.08 Aligned_cols=123 Identities=11% Similarity=0.061 Sum_probs=62.3
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEECCC--ceeeee-CCCCcccc--CCCceEEEEEEeCCeEEEEEecCCCeEEEEE
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNLVA--KEFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFCFYNLVYVDMWM 275 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~ 275 (389)
..++..+|.+|..+.. ..|.++|..+ +.|+.- ..+..... ..+.....++..+|++++..... .|..
T Consensus 60 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg----~l~a 131 (668)
T 1kv9_A 60 ATPLFHDGVIYTSMSW----SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDG----RLIA 131 (668)
T ss_dssp CCCEEETTEEEEEEGG----GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTS----EEEE
T ss_pred cCCEEECCEEEEECCC----CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCC----EEEE
Confidence 4568899999987543 5799999865 456652 22211100 00000112344567766654221 2444
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 276 MKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 276 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
++-...+..|..... .. . ........|+.. ++.|++... ++.++.||.+|++..+-
T Consensus 132 lD~~tG~~~W~~~~~-~~-~-~~~~~~~~P~v~---~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 193 (668)
T 1kv9_A 132 LDAKTGKAIWSQQTT-DP-A-KPYSITGAPRVV---KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWR 193 (668)
T ss_dssp EETTTCCEEEEEECS-CT-T-SSCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCCCCEeeeeccC-CC-C-CcceecCCCEEE---CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEE
Confidence 442222455754321 00 0 000001234332 456766543 25799999999987654
No 161
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=57.62 E-value=83 Score=26.24 Aligned_cols=192 Identities=11% Similarity=0.045 Sum_probs=95.7
Q ss_pred ecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 93 CNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 93 ~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
.+|.|.+.+ ....+.++++.++....+-... .....++.+|+..+. ++... .....+.+++.
T Consensus 46 ~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~-------~~~p~~ia~d~~~~~--lyv~d--------~~~~~I~~~~~ 108 (267)
T 1npe_A 46 VDKVVYWTDISEPSIGRASLHGGEPTTIIRQD-------LGSPEGIALDHLGRT--IFWTD--------SQLDRIEVAKM 108 (267)
T ss_dssp TTTEEEEEETTTTEEEEEESSSCCCEEEECTT-------CCCEEEEEEETTTTE--EEEEE--------TTTTEEEEEET
T ss_pred CCCEEEEEECCCCEEEEEecCCCCcEEEEECC-------CCCccEEEEEecCCe--EEEEE--------CCCCEEEEEEc
Confidence 356665555 3457888888776543332111 112356777765443 22221 12236777777
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCc
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYAN 248 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 248 (389)
....-+.+.... . ....++.+ +|.+||.... .....|..+++.......+.. ... ..
T Consensus 109 ~g~~~~~~~~~~------------~--~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~~~~~~~~-~~~---~~- 168 (267)
T 1npe_A 109 DGTQRRVLFDTG------------L--VNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGTNRRILAQ-DNL---GL- 168 (267)
T ss_dssp TSCSCEEEECSS------------C--SSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSCCCEEEEC-TTC---SC-
T ss_pred CCCCEEEEEECC------------C--CCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCCCcEEEEE-CCC---CC-
Confidence 543322221100 0 11123433 6899997532 113578899987654444321 111 11
Q ss_pred eEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEE
Q 036391 249 VHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 325 (389)
Q Consensus 249 ~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~ 325 (389)
...++.. ++.|+++..... . |++++-.+ . .....+.. ...|.++..+++.+++... .+++.
T Consensus 169 -P~gia~d~~~~~lyv~d~~~~-~--I~~~~~~g---~-~~~~~~~~--------~~~P~gi~~d~~~lyva~~~~~~v~ 232 (267)
T 1npe_A 169 -PNGLTFDAFSSQLCWVDAGTH-R--AECLNPAQ---P-GRRKVLEG--------LQYPFAVTSYGKNLYYTDWKTNSVI 232 (267)
T ss_dssp -EEEEEEETTTTEEEEEETTTT-E--EEEEETTE---E-EEEEEEEC--------CCSEEEEEEETTEEEEEETTTTEEE
T ss_pred -CcEEEEcCCCCEEEEEECCCC-E--EEEEecCC---C-ceEEEecC--------CCCceEEEEeCCEEEEEECCCCeEE
Confidence 1233433 567887765433 3 44554321 1 11111221 1245566556677777654 46899
Q ss_pred EEeCCCCcE-EEE
Q 036391 326 WFDLETNSL-RTV 337 (389)
Q Consensus 326 ~yd~~~~~~-~~v 337 (389)
.+|+++++. +.+
T Consensus 233 ~~d~~~g~~~~~i 245 (267)
T 1npe_A 233 AMDLAISKEMDTF 245 (267)
T ss_dssp EEETTTTEEEEEE
T ss_pred EEeCCCCCceEEE
Confidence 999998765 444
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=57.28 E-value=54 Score=28.26 Aligned_cols=98 Identities=12% Similarity=0.059 Sum_probs=53.6
Q ss_pred EEEEEECCCceeeeeCCCCccccCCCceEEEEEE-e-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 222 VIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-L-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 222 ~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
.++.+|..+.+...+...... .. ...+.. - +|+..++. ...+.+|-++. ...+..+....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~----~~-~~~~~~sp~dg~~l~~~---~~~v~~~d~~~------~~~~~~~~~~~---- 295 (349)
T 1jmx_B 234 GYLSVDLKTGKTHTQEFADLT----EL-YFTGLRSPKDPNQIYGV---LNRLAKYDLKQ------RKLIKAANLDH---- 295 (349)
T ss_dssp EEEEEETTTCCEEEEEEEECS----SC-EEEEEECSSCTTEEEEE---ESEEEEEETTT------TEEEEEEECSS----
T ss_pred eEEEEeccCCcEEecccccCC----Cc-ceeeEecCCCCCEEEEE---cCeEEEEECcc------CeEEEEEcCCC----
Confidence 344577777666655442111 11 112222 2 56554444 33777776653 22333444321
Q ss_pred cceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE-EEEEE
Q 036391 300 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL-RTVKI 339 (389)
Q Consensus 300 ~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~-~~v~~ 339 (389)
...-++++++|+.++....++.+.+||+++++. ..+.+
T Consensus 296 --~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~ 334 (349)
T 1jmx_B 296 --TYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKL 334 (349)
T ss_dssp --CCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEEC
T ss_pred --CccceEECCCCCEEEEecCCCeEEEEeccccceeeeeec
Confidence 123567788888888765567899999998764 44444
No 163
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=57.07 E-value=1.3e+02 Score=28.33 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=38.4
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
+|.+.+++.. +..+.||.++..+ ..+..+... .....-+++.++|. ++....++.+..||++++
T Consensus 552 ~~~~l~~~~~-dg~i~iw~~~~~~-----~~~~~~~~h-----~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 552 EEDLVATGSL-DTNIFIYSVKRPM-----KIIKALNAH-----KDGVNNLLWETPST-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp SCCEEEEEET-TSCEEEEESSCTT-----CCEEETTSS-----TTCEEEEEEEETTE-EEEEETTSCEEEEEEC--
T ss_pred CCCEEEEEcC-CCcEEEEECCCCc-----eechhhhcC-----ccceEEEEEcCCCC-eEEecCCceEEEEeeecC
Confidence 5666555554 4489999998632 112222211 12345578888887 666666777999998753
No 164
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=56.92 E-value=87 Score=30.99 Aligned_cols=124 Identities=13% Similarity=0.064 Sum_probs=62.4
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEECCC--ceeeee-CCCCcccc--CCCceEEEEEEeCCeEEEEEecCCCeEEEEE
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNLVA--KEFYQL-PLPDSVNV--SYANVHVDVGSLEGCLCVFCFYNLVYVDMWM 275 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~~~--e~~~~i-~~P~~~~~--~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~ 275 (389)
..++..+|.+|..+.. ..|.++|..+ +.|+.- ..+..... ..+.....++..+|+|++..... . |..
T Consensus 64 ~~P~v~~g~vyv~~~~----~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~dg--~--l~A 135 (689)
T 1yiq_A 64 ATPIVVDGVMYTTGPF----SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLDG--R--LEA 135 (689)
T ss_dssp CCCEEETTEEEEECGG----GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTTS--E--EEE
T ss_pred ecCEEECCEEEEEcCC----CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccCC--E--EEE
Confidence 4567899999987543 5699999865 456642 22211100 00001112345677776654321 2 334
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 276 MKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 276 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
++-...+..|......+... .......|+.. ++.|++... ++.++.||.+|++..+-
T Consensus 136 lDa~TG~~~W~~~~~~~~~~--~~~~~~sP~v~---~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKR--SYTITGAPRVV---NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp EETTTCCEEEEEECCSCTTS--CCBCCSCCEEE---TTEEEECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred EECCCCCEeeeecCcCCCCC--CccccCCcEEE---CCEEEEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 44221245575432111100 00001244433 356666542 35799999999986654
No 165
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=56.58 E-value=84 Score=27.56 Aligned_cols=74 Identities=8% Similarity=0.101 Sum_probs=40.1
Q ss_pred eeeE--CCeEEEEccCC--CCCcEEEEEECCCce-eeeeCCCCccccCCCceEEEEEEe--CCeEEEEEec--CCCeEEE
Q 036391 203 GVLA--GGALHWVSPKS--STRSVIMAFNLVAKE-FYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFCFY--NLVYVDM 273 (389)
Q Consensus 203 ~v~~--~G~lywl~~~~--~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~~l~~~--~G~L~~~~~~--~~~~l~i 273 (389)
++.+ +|.+||+.... .....|+.||+.+.+ ...+.+|..... ...+.-.++.. +|.+++.... ....+.+
T Consensus 71 gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~-~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 71 GIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITL-SNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp EEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSC-TTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred EEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcc-cccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 4554 48999874310 013579999999876 556777643211 11111234444 5677766541 2335555
Q ss_pred EEEe
Q 036391 274 WMMK 277 (389)
Q Consensus 274 W~l~ 277 (389)
|-++
T Consensus 150 ~d~~ 153 (343)
T 2qe8_A 150 VDLQ 153 (343)
T ss_dssp EETT
T ss_pred EECC
Confidence 5554
No 166
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=56.22 E-value=92 Score=26.81 Aligned_cols=69 Identities=12% Similarity=0.121 Sum_probs=42.6
Q ss_pred eEEEEEecCCCeEEEEEEeeCCCCCCe-EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 259 CLCVFCFYNLVYVDMWMMKEHAVKESW-TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 259 ~L~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
.+.+.+.. +..+.+|.+.... ... ..+..+.... ....-+++.++|..++-...++.+.+||+++++..
T Consensus 31 ~~l~s~s~-D~~v~~W~~~~~~--~~~~~~~~~~~~h~-----~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~ 100 (319)
T 3frx_A 31 NLLLSASR-DKTLISWKLTGDD--QKFGVPVRSFKGHS-----HIVQDCTLTADGAYALSASWDKTLRLWDVATGETY 100 (319)
T ss_dssp TEEEEEET-TSEEEEEEEEEET--TEEEEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred cEEEEecC-CccEEEecCCCCC--ccccccceEEeCCc-----ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee
Confidence 44444443 4489999997532 222 2233333221 12455677788888777777788999999988653
No 167
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=55.94 E-value=1.1e+02 Score=27.13 Aligned_cols=72 Identities=10% Similarity=0.055 Sum_probs=43.2
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCC--CCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTP--TRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~--~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
+|...+.+. .+..+.||-+... ..+..+..... ........-++++++|..++....++.+.+||..+++.
T Consensus 260 ~~~~l~s~s-~D~~i~lwd~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~ 332 (380)
T 3iz6_a 260 DGQRFGTGS-DDGTCRLFDMRTG------HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEM 332 (380)
T ss_dssp TSSEEEEEC-SSSCEEEEETTTT------EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCE
T ss_pred CCCeEEEEc-CCCeEEEEECCCC------cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCce
Confidence 566554444 4458999988741 12222222111 11111245678888998888777777899999988765
Q ss_pred E
Q 036391 335 R 335 (389)
Q Consensus 335 ~ 335 (389)
.
T Consensus 333 ~ 333 (380)
T 3iz6_a 333 V 333 (380)
T ss_dssp E
T ss_pred E
Confidence 4
No 168
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=55.89 E-value=97 Score=30.72 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=55.2
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeE
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWT 286 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~ 286 (389)
+|.|||.... ....|..+|+....-..+-.. ... ....+.+...+|+||++..... . |++++-.+ ... .
T Consensus 507 ~g~ly~td~~--~~~~I~~~~~dG~~~~~l~~~-~l~---~PnGlavd~~~~~LY~aD~~~~-~--I~~~d~dG-~~~-~ 575 (699)
T 1n7d_A 507 HGFMYWTDWG--TPAKIKKGGLNGVDIYSLVTE-NIQ---WPNGITLDLLSGRLYWVDSKLH-S--ISSIDVNG-GNR-K 575 (699)
T ss_dssp SSCCEECCCS--SSCCEEBCCSSSCCCCEESCS-SCS---SCCCEEECTTTCCEEEEETTTT-E--EEEECSSS-SCC-E
T ss_pred CCcEEEcccC--CCCeEEEEeCCCCCeeEEEeC-CCC---CccEEEEeccCCEEEEEecCCC-e--EEEEccCC-Cce-E
Confidence 6899996432 225788888865433332110 110 0111222223678888775432 3 45555322 111 1
Q ss_pred EEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 287 KLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 287 ~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
.+ +.... ....|.++.-+++.||+... ..+|..+|..+++...+
T Consensus 576 ~~--~~~~~-----~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~ 620 (699)
T 1n7d_A 576 TI--LEDEK-----RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNL 620 (699)
T ss_dssp EE--CCCSS-----SCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEEC
T ss_pred EE--EecCC-----cCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEE
Confidence 11 11111 11245444445566776543 45799999987765443
No 169
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=55.09 E-value=96 Score=26.22 Aligned_cols=198 Identities=12% Similarity=0.055 Sum_probs=91.9
Q ss_pred CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEc-c
Q 036391 102 SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRI-S 180 (389)
Q Consensus 102 ~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~-~ 180 (389)
....++++||.+++...+..+.. . .......++.+++..+. ++ +.. ....+.+|+.. +..+.+ .
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~--~-~~~~~~~~i~~~~~~g~--l~-v~~--------~~~~l~~~d~~-g~~~~~~~ 108 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEV--N-GYGGIPAGCQCDRDANQ--LF-VAD--------MRLGLLVVQTD-GTFEEIAK 108 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEE--T-TEECCEEEEEECSSSSE--EE-EEE--------TTTEEEEEETT-SCEEECCS
T ss_pred CCCEEEEEeCCCCcEEEEEeccc--C-CCCCCCceEEEecCCCc--EE-EEE--------CCCCEEEEeCC-CCEEEEEe
Confidence 35678999999988876543210 0 00122445666654222 22 221 11257788887 776655 3
Q ss_pred cCCcccccccccccccccccCceeeE--CCeEEEEccCC------------CCCcEEEEEECCCceeeeeCCCCccccCC
Q 036391 181 NLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKS------------STRSVIMAFNLVAKEFYQLPLPDSVNVSY 246 (389)
Q Consensus 181 ~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~------------~~~~~il~fD~~~e~~~~i~~P~~~~~~~ 246 (389)
.... .........+.+ +|.+|+..... .....|..+|.. .++..+.- ...
T Consensus 109 ~~~~----------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~~--- 172 (314)
T 1pjx_A 109 KDSE----------GRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT--AFQ--- 172 (314)
T ss_dssp BCTT----------SCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE--EES---
T ss_pred ccCC----------CccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc--CCC---
Confidence 2110 000011123333 67776654321 012578999987 55444311 100
Q ss_pred CceEEEEEE-----eCC-eEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEE-cCCCCCCCcceeeeEEEEeCCCEEEEE-
Q 036391 247 ANVHVDVGS-----LEG-CLCVFCFYNLVYVDMWMMKEHAVKESWTKLISV-QEPTPTRSFLFLRPLGYSRNGVKLLLE- 318 (389)
Q Consensus 247 ~~~~~~l~~-----~~G-~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i-~~~~~~~~~~~~~p~~~~~~g~~i~l~- 318 (389)
.. ..++. -+| .|++.... ...+.+|.++.. ........+ ...... .....-+++.++|. +++.
T Consensus 173 ~~--~~i~~~~~~d~dg~~l~v~~~~-~~~i~~~~~~~~---g~~~~~~~~~~~~~~~--~~~p~~i~~d~~G~-l~v~~ 243 (314)
T 1pjx_A 173 FP--NGIAVRHMNDGRPYQLIVAETP-TKKLWSYDIKGP---AKIENKKVWGHIPGTH--EGGADGMDFDEDNN-LLVAN 243 (314)
T ss_dssp SE--EEEEEEECTTSCEEEEEEEETT-TTEEEEEEEEET---TEEEEEEEEEECCCCS--SCEEEEEEEBTTCC-EEEEE
T ss_pred Cc--ceEEEecccCCCCCEEEEEECC-CCeEEEEECCCC---CccccceEEEECCCCC--CCCCCceEECCCCC-EEEEE
Confidence 01 11222 345 35554433 336777766532 223222111 111100 01233356666775 4554
Q ss_pred EcCcEEEEEeCCCCc-EEEEEE
Q 036391 319 VRREKLVWFDLETNS-LRTVKI 339 (389)
Q Consensus 319 ~~~~~l~~yd~~~~~-~~~v~~ 339 (389)
...+.+..||+++++ ...+..
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEEC
T ss_pred cCCCEEEEEcCCCCcEeEEEeC
Confidence 345679999999544 344433
No 170
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=55.03 E-value=1.1e+02 Score=27.66 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=55.0
Q ss_pred CcEEEEEECCCceeee-eCCCCccccCCCceEEEEEEeCCe-EEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC
Q 036391 220 RSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSLEGC-LCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT 297 (389)
Q Consensus 220 ~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~G~-L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 297 (389)
...|-.+|+.+..... +...... ...+...++. |.......+..+.||-+.. +.++..+.-+.
T Consensus 300 D~~I~iwd~~t~~~~~~~~~~~~v-------~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~------~~~v~~l~gH~-- 364 (420)
T 4gga_A 300 DRHIRIWNVCSGACLSAVDAHSQV-------CSILWSPHYKELISGHGFAQNQLVIWKYPT------MAKVAELKGHT-- 364 (420)
T ss_dssp TCEEEEEETTTTEEEEEEECSSCE-------EEEEEETTTTEEEEEECTTTCCEEEEETTT------CCEEEEECCCS--
T ss_pred CCEEEEEeCCccccceeeccccce-------eeeeecCCCCeEEEEEecCCCEEEEEECCC------CcEEEEEcCCC--
Confidence 3567788888765443 2322211 1122333444 4444444556899997653 34555554321
Q ss_pred CCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
....-++++++|..|+-+..++.+.+||+.+
T Consensus 365 ---~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 365 ---SRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp ---SCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ---CCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 1245577888998877777777899999865
No 171
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=54.46 E-value=80 Score=26.96 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=42.5
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
+|.+.+.+.. +..+.||-++. . ..+..+.... .....+.+.+++..++....++.+.+||+++++..
T Consensus 24 ~~~~l~s~~~-dg~v~lWd~~~----~--~~~~~~~~~~-----~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 24 TEPWVLTTLY-SGRVELWNYET----Q--VEVRSIQVTE-----TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp SSSEEEEEET-TSEEEEEETTT----T--EEEEEEECCS-----SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCEEEEEcC-CCcEEEEECCC----C--ceeEEeeccC-----CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE
Confidence 5555444443 44899998764 1 2334444321 12455677888888888777788999999887643
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=54.38 E-value=95 Score=25.95 Aligned_cols=190 Identities=12% Similarity=0.129 Sum_probs=95.5
Q ss_pred eecceEEEeeC--CceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 92 SCNGLIALCNS--VQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 92 s~~GLl~l~~~--~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
..+|.+.+... ...+.++|+..+....+..... ....++.+++.. +++... . ....+.+|
T Consensus 86 ~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~-------~~~~~i~~~~~g---~l~v~~-~-------~~~~i~~~ 147 (286)
T 1q7f_A 86 RNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATIL-------QHPRGVTVDNKG---RIIVVE-C-------KVMRVIIF 147 (286)
T ss_dssp TTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTC-------SCEEEEEECTTS---CEEEEE-T-------TTTEEEEE
T ss_pred cCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccC-------CCceEEEEeCCC---CEEEEE-C-------CCCEEEEE
Confidence 35676666653 5678999965554444433221 123456667643 233221 0 22367778
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCC
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYA 247 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 247 (389)
+.....-+.+.... .. ....++.+ +|.+|.... ....|..||...+....+..+.... .
T Consensus 148 ~~~g~~~~~~~~~~-----------~~--~~p~~i~~~~~g~l~v~~~---~~~~i~~~~~~g~~~~~~~~~g~~~---~ 208 (286)
T 1q7f_A 148 DQNGNVLHKFGCSK-----------HL--EFPNGVVVNDKQEIFISDN---RAHCVKVFNYEGQYLRQIGGEGITN---Y 208 (286)
T ss_dssp CTTSCEEEEEECTT-----------TC--SSEEEEEECSSSEEEEEEG---GGTEEEEEETTCCEEEEESCTTTSC---S
T ss_pred cCCCCEEEEeCCCC-----------cc--CCcEEEEECCCCCEEEEEC---CCCEEEEEcCCCCEEEEEccCCccC---C
Confidence 76544333332111 00 11123333 588776533 2358999999777666665432211 1
Q ss_pred ceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEE
Q 036391 248 NVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVW 326 (389)
Q Consensus 248 ~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~ 326 (389)
...++.. +|.|+++.......+.+|..+ ..- +..+..... .....-+++.++|. +++...++.+.+
T Consensus 209 --p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-----g~~--~~~~~~~~~---~~~~~~i~~~~~g~-l~vs~~~~~v~v 275 (286)
T 1q7f_A 209 --PIGVGINSNGEILIADNHNNFNLTIFTQD-----GQL--ISALESKVK---HAQCFDVALMDDGS-VVLASKDYRLYI 275 (286)
T ss_dssp --EEEEEECTTCCEEEEECSSSCEEEEECTT-----SCE--EEEEEESSC---CSCEEEEEEETTTE-EEEEETTTEEEE
T ss_pred --CcEEEECCCCCEEEEeCCCCEEEEEECCC-----CCE--EEEEcccCC---CCcceeEEECCCCc-EEEECCCCeEEE
Confidence 1234443 788887765432367777422 122 222222110 01133466777775 555555667888
Q ss_pred EeCCC
Q 036391 327 FDLET 331 (389)
Q Consensus 327 yd~~~ 331 (389)
|+...
T Consensus 276 ~~~~~ 280 (286)
T 1q7f_A 276 YRYVQ 280 (286)
T ss_dssp EECSC
T ss_pred EEccc
Confidence 87754
No 173
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=54.22 E-value=1.1e+02 Score=26.57 Aligned_cols=112 Identities=6% Similarity=-0.044 Sum_probs=60.8
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE--eCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
.+|.+||... ....|..+|+....-..+-- ... .. ...++. .+|.|++..... .-.|++++-.+.
T Consensus 87 ~~~~ly~~d~---~~~~I~~~~~~g~~~~~~~~-~~~---~~--P~~iavdp~~g~ly~~d~~~--~~~I~~~~~dG~-- 153 (316)
T 1ijq_A 87 IHSNIYWTDS---VLGTVSVADTKGVKRKTLFR-ENG---SK--PRAIVVDPVHGFMYWTDWGT--PAKIKKGGLNGV-- 153 (316)
T ss_dssp TTTEEEEEET---TTTEEEEEETTSSSEEEEEE-CTT---CC--EEEEEEETTTTEEEEEECSS--SCEEEEEETTSC--
T ss_pred cCCeEEEEEC---CCCEEEEEeCCCCceEEEEE-CCC---CC--cceEEeCCCCCEEEEEccCC--CCeEEEEcCCCC--
Confidence 4689999843 34689999998654443311 111 11 123444 478888776432 124666553331
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
-.+. +....+ ....-+++.++++.||+... ..++..+|+++...+.+
T Consensus 154 -~~~~--~~~~~~----~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~ 201 (316)
T 1ijq_A 154 -DIYS--LVTENI----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 201 (316)
T ss_dssp -CEEE--EECSSC----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred -CeEE--EEECCC----CCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEE
Confidence 1111 111111 12334556656778887754 35799999987666655
No 174
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=53.83 E-value=1.1e+02 Score=26.52 Aligned_cols=97 Identities=5% Similarity=0.020 Sum_probs=52.5
Q ss_pred EEEEEECCCce-eeeeCCCCccccCCCceEEEEEEe---CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC
Q 036391 222 VIMAFNLVAKE-FYQLPLPDSVNVSYANVHVDVGSL---EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT 297 (389)
Q Consensus 222 ~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~~l~~~---~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 297 (389)
.+..+|+.+.+ ...+..+... .. ..+... +|.+.+.+.. +..+.+|-+.... . ... ..... .
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~-----~v-~~~~~~~~~~~~~l~s~s~-dg~i~~wd~~~~~---~-~~~--~~~~~-~ 170 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSAN-----EI-IYMYGHNEVNTEYFIWADN-RGTIGFQSYEDDS---Q-YIV--HSAKS-D 170 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCSS-----CE-EEEECCC---CCEEEEEET-TCCEEEEESSSSC---E-EEE--ECCCS-S
T ss_pred ceEEeecCCcceeEEeecCCCC-----CE-EEEEcCCCCCCCEEEEEeC-CCcEEEEECCCCc---E-EEE--EecCC-C
Confidence 56667776655 4444433221 11 112221 4555554443 4489999987521 1 111 11111 0
Q ss_pred CCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-++++++|..+..+..++.+..||+++++..
T Consensus 171 ---~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 171 ---VEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp ---CCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred ---CceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 11345677888887776666778999999987754
No 175
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=53.38 E-value=1.2e+02 Score=26.80 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=54.7
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CC-eEEEEEecCC--CeEEEEEEeeCCCCCCeEEEEEEcCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EG-CLCVFCFYNL--VYVDMWMMKEHAVKESWTKLISVQEPT 295 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~--~~l~iW~l~~~~~~~~W~~~~~i~~~~ 295 (389)
..|..+|+.+.+... +..+..... +...-..+.-. +| .+.+++..+. ..+.+|-+..... . +..+..
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-~----~~~~~~-- 259 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSG-IKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-P----LQTLNQ-- 259 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSC-CCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-C----SBCCCS--
T ss_pred CCEEEEECCCCCcceEEeccccccc-cCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-C----cEEeec--
Confidence 568999998765433 444421110 01111123333 34 4444443321 1788998875221 0 011110
Q ss_pred CCCCcceeeeEEEEe-CCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 296 PTRSFLFLRPLGYSR-NGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 296 ~~~~~~~~~p~~~~~-~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
+......-+++++ ++..++....++.+.+||+++++..
T Consensus 260 --~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 260 --GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp --CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred --CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 1111244566776 7777777777778999999987653
No 176
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=53.02 E-value=1.8e+02 Score=28.72 Aligned_cols=186 Identities=9% Similarity=0.021 Sum_probs=90.8
Q ss_pred EEEeeCCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCc
Q 036391 97 IALCNSVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINS 175 (389)
Q Consensus 97 l~l~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~ 175 (389)
|.....++.+.|||..+++... +... .....++.+.|... .+.... ....+.||+..++.
T Consensus 28 la~~~~~g~v~iwd~~~~~~~~~~~~~--------~~~v~~~~~s~~~~---~l~~~~--------~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYETQVEVRSIQVT--------ETPVRAGKFIARKN---WIIVGS--------DDFRIRVFNYNTGE 88 (814)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECC--------SSCEEEEEEEGGGT---EEEEEE--------TTSEEEEEETTTCC
T ss_pred EEEEeCCCEEEEEECCCCceEEEEecC--------CCcEEEEEEeCCCC---EEEEEe--------CCCeEEEEECCCCc
Confidence 3333346678899988876543 2211 11244566666432 232222 23478899988876
Q ss_pred EEEc-ccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCc-eeee-eCCCCccccCCCceEEE
Q 036391 176 WRRI-SNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAK-EFYQ-LPLPDSVNVSYANVHVD 252 (389)
Q Consensus 176 W~~~-~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e-~~~~-i~~P~~~~~~~~~~~~~ 252 (389)
.... ..... ....-...-+|.....+. ....|..+|+.++ .... +..... . -..
T Consensus 89 ~~~~~~~~~~-------------~v~~~~~s~~~~~l~~~~---~dg~i~vw~~~~~~~~~~~~~~~~~------~-v~~ 145 (814)
T 3mkq_A 89 KVVDFEAHPD-------------YIRSIAVHPTKPYVLSGS---DDLTVKLWNWENNWALEQTFEGHEH------F-VMC 145 (814)
T ss_dssp EEEEEECCSS-------------CEEEEEECSSSSEEEEEE---TTSEEEEEEGGGTSEEEEEEECCSS------C-EEE
T ss_pred EEEEEecCCC-------------CEEEEEEeCCCCEEEEEc---CCCEEEEEECCCCceEEEEEcCCCC------c-EEE
Confidence 5322 11110 000001112343222222 2357888888765 2222 221111 1 112
Q ss_pred EEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEe--CCCEEEEEEcCcEEEEEe
Q 036391 253 VGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSR--NGVKLLLEVRREKLVWFD 328 (389)
Q Consensus 253 l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~--~g~~i~l~~~~~~l~~yd 328 (389)
+.-. +|.+.+++.. +..+.+|.+.... ..+.. ..... ....-+.+++ +|..++....++.+..||
T Consensus 146 ~~~~p~~~~~l~~~~~-dg~v~vwd~~~~~--~~~~~----~~~~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCL-DRTVKVWSLGQST--PNFTL----TTGQE----RGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (814)
T ss_dssp EEEETTEEEEEEEEET-TSEEEEEETTCSS--CSEEE----ECCCT----TCCCEEEECCSTTCCEEEEECTTSEEEEEE
T ss_pred EEEEcCCCCEEEEEeC-CCeEEEEECCCCc--ceeEE----ecCCC----CCEEEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 3333 4555444443 4489999886422 22222 11110 1234456666 777777777777899999
Q ss_pred CCCCcEE
Q 036391 329 LETNSLR 335 (389)
Q Consensus 329 ~~~~~~~ 335 (389)
+++++..
T Consensus 215 ~~~~~~~ 221 (814)
T 3mkq_A 215 YQTKSCV 221 (814)
T ss_dssp TTTTEEE
T ss_pred CCCCcEE
Confidence 8887643
No 177
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=52.96 E-value=1.7e+02 Score=28.48 Aligned_cols=100 Identities=11% Similarity=0.041 Sum_probs=53.4
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CC-eEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EG-CLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|...+.-..+...... +...-..+.-. ++ .-.++....+..+.||-+... .....+..+.
T Consensus 494 ~~i~iwd~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~------~~~~~~~~h~--- 561 (694)
T 3dm0_A 494 RTIKLWNTLGECKYTISEGGEG---HRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC------KLRSTLAGHT--- 561 (694)
T ss_dssp SCEEEECTTSCEEEEECSSTTS---CSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC------CEEEEECCCS---
T ss_pred CEEEEEECCCCcceeeccCCCC---CCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC------cEEEEEcCCC---
Confidence 4577778765543333221111 11111122222 33 223444444558999987641 1233333211
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
....-++++++|..++....++.+.+||+++++.
T Consensus 562 --~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~ 595 (694)
T 3dm0_A 562 --GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKK 595 (694)
T ss_dssp --SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEE
T ss_pred --CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCce
Confidence 1245577788888877777777899999988753
No 178
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=52.93 E-value=1.8e+02 Score=28.73 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=66.5
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCC--ceeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVA--KEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~--e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
-++.+|+.+........|...|+.+ +.|..+- |.... . --.+...++.|.+....+. ...||+++-.+
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~----~-l~~~~~~~~~lv~~~~~dg-~~~l~~~~~~g--- 395 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKD----N-LESVGIAGNRLFASYIHDA-KSQVLAFDLDG--- 395 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSS----E-EEEEEEEBTEEEEEEEETT-EEEEEEEETTS---
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCC----e-EEEEEEECCEEEEEEEECC-EEEEEEEeCCC---
Confidence 3456777665433356899999987 5777653 32211 1 1133445788777665543 77888887322
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----cEEEEEeCCCCcEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----~~l~~yd~~~~~~~~v 337 (389)
. ....+..+. ......+.+.++++.+++...+ ..++.||+.+++.+.+
T Consensus 396 ~--~~~~l~~~~----~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 396 K--PAGAVSLPG----IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp C--EEEECBCSS----SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred C--ceeeccCCC----CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 1 233344321 0112334455677777765432 3699999999876544
No 179
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=52.82 E-value=1.3e+02 Score=27.21 Aligned_cols=205 Identities=14% Similarity=0.037 Sum_probs=99.5
Q ss_pred EEeeecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+.-+.+|-|.+.+ ....+.++||.+++...+..... .. . +.+++..+ .++... . .....+.
T Consensus 136 la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~------~~--~-ia~~~~g~--~l~~~d-~------~~~~~I~ 197 (409)
T 3hrp_A 136 IAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK------GG--K-PAVTKDKQ--RVYSIG-W------EGTHTVY 197 (409)
T ss_dssp EEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC------BC--B-CEECTTSS--EEEEEB-S------STTCEEE
T ss_pred EEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC------CC--c-eeEecCCC--cEEEEe-c------CCCceEE
Confidence 4334567666655 34689999999888776643321 11 1 44555433 222221 0 0112566
Q ss_pred EEEcCCCc-EEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeC---CCC
Q 036391 168 VYSLKINS-WRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLP---LPD 240 (389)
Q Consensus 168 Vyss~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~---~P~ 240 (389)
+++..++. .+.++.... ... ....++.+ +|.+|+... ...|..+|+.+.....+. ...
T Consensus 198 ~~d~~~~~~~~~~g~~~~---------~~~--~~p~~iav~p~~g~lyv~d~----~~~I~~~d~~~~~~~~~~~~~~~g 262 (409)
T 3hrp_A 198 VYMKASGWAPTRIGQLGS---------TFS--GKIGAVALDETEEWLYFVDS----NKNFGRFNVKTQEVTLIKQLELSG 262 (409)
T ss_dssp EEEGGGTTCEEEEEECCT---------TSC--SCCCBCEECTTSSEEEEECT----TCEEEEEETTTCCEEEEEECCCCS
T ss_pred EEEcCCCceeEEeeeccc---------hhc--CCcEEEEEeCCCCeEEEEEC----CCcEEEEECCCCCEEEEecccccC
Confidence 77765442 333321110 000 11112222 689998322 357999999877655541 111
Q ss_pred ccccCCCce-EEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC---------CcceeeeEEEEe
Q 036391 241 SVNVSYANV-HVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR---------SFLFLRPLGYSR 310 (389)
Q Consensus 241 ~~~~~~~~~-~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~---------~~~~~~p~~~~~ 310 (389)
... ...+ .+.+...+|.|+++..... . |++++..+ .-..+ .......+ .+....-+++.+
T Consensus 263 ~~~--~~P~~~ia~~p~~g~lyv~d~~~~-~--I~~~~~~g---~~~~~--~g~~~~~g~~dg~~~~~~~~~P~gia~d~ 332 (409)
T 3hrp_A 263 SLG--TNPGPYLIYYFVDSNFYMSDQNLS-S--VYKITPDG---ECEWF--CGSATQKTVQDGLREEALFAQPNGMTVDE 332 (409)
T ss_dssp CCC--CSSCCEEEEETTTTEEEEEETTTT-E--EEEECTTC---CEEEE--EECTTCCSCBCEEGGGCBCSSEEEEEECT
T ss_pred CCC--CCccccEEEeCCCCEEEEEeCCCC-E--EEEEecCC---CEEEE--EeCCCCCCcCCCcccccEeCCCeEEEEeC
Confidence 111 1112 2222223688888765433 3 55554322 11111 11110000 011233356667
Q ss_pred CCCEEEEEE--cCcEEEEEeCCCCcEEEE
Q 036391 311 NGVKLLLEV--RREKLVWFDLETNSLRTV 337 (389)
Q Consensus 311 ~g~~i~l~~--~~~~l~~yd~~~~~~~~v 337 (389)
+|. +++.. ...++..+|+.++++..+
T Consensus 333 dG~-lyvad~~~~~~I~~~~~~~G~v~~~ 360 (409)
T 3hrp_A 333 DGN-FYIVDGFKGYCLRKLDILDGYVSTV 360 (409)
T ss_dssp TCC-EEEEETTTTCEEEEEETTTTEEEEE
T ss_pred CCC-EEEEeCCCCCEEEEEECCCCEEEEE
Confidence 777 55554 456799999888887766
No 180
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=52.76 E-value=1e+02 Score=25.74 Aligned_cols=195 Identities=11% Similarity=0.086 Sum_probs=98.7
Q ss_pred EEeeecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+....+|-+.+.. ....+.++||. ++...++.+.. .....++..++.. . +.. ... ....+.
T Consensus 25 i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~------~~~~~~i~~~~~g-~--l~v-~~~-------~~~~v~ 86 (300)
T 2qc5_A 25 ITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTP------DAKVMCLIVSSLG-D--IWF-TEN-------GANKIG 86 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST------TCCEEEEEECTTS-C--EEE-EET-------TTTEEE
T ss_pred eeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCC------CCcceeEEECCCC-C--EEE-Eec-------CCCeEE
Confidence 4444567666665 35678999998 77665543221 1223455566432 2 222 210 123567
Q ss_pred EEEcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccC
Q 036391 168 VYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVS 245 (389)
Q Consensus 168 Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 245 (389)
+|+.. +.++...... .. ....++.+ +|.+|+... ....|..+|.. .+...+.+|....
T Consensus 87 ~~d~~-g~~~~~~~~~-----------~~--~~~~~i~~~~~g~l~v~~~---~~~~i~~~~~~-g~~~~~~~~~~~~-- 146 (300)
T 2qc5_A 87 KLSKK-GGFTEYPLPQ-----------PD--SGPYGITEGLNGDIWFTQL---NGDRIGKLTAD-GTIYEYDLPNKGS-- 146 (300)
T ss_dssp EECTT-SCEEEEECSS-----------TT--CCEEEEEECSTTCEEEEET---TTTEEEEECTT-SCEEEEECSSTTC--
T ss_pred EECCC-CCeEEecCCC-----------CC--CCCccceECCCCCEEEEcc---CCCeEEEECCC-CCEEEccCCCCCC--
Confidence 78777 6665443211 00 11123333 588776533 23579999998 6666665553221
Q ss_pred CCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcE
Q 036391 246 YANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REK 323 (389)
Q Consensus 246 ~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~ 323 (389)
. ...++. -+|.|++...... . |++++.. ..... ...+. . .....-+++.++|. +++... ...
T Consensus 147 -~--~~~i~~d~~g~l~v~~~~~~-~--i~~~~~~---g~~~~-~~~~~-~----~~~~~~i~~d~~g~-l~v~~~~~~~ 210 (300)
T 2qc5_A 147 -Y--PAFITLGSDNALWFTENQNN-S--IGRITNT---GKLEE-YPLPT-N----AAAPVGITSGNDGA-LWFVEIMGNK 210 (300)
T ss_dssp -C--EEEEEECTTSSEEEEETTTT-E--EEEECTT---CCEEE-EECSS-T----TCCEEEEEECTTSS-EEEEETTTTE
T ss_pred -C--ceeEEECCCCCEEEEecCCC-e--EEEECCC---CcEEE-eeCCC-C----CCCcceEEECCCCC-EEEEccCCCE
Confidence 1 123444 3788777664322 3 4555431 23332 11111 1 11123345555664 555543 457
Q ss_pred EEEEeCCCCcEEEEE
Q 036391 324 LVWFDLETNSLRTVK 338 (389)
Q Consensus 324 l~~yd~~~~~~~~v~ 338 (389)
+..||+ ++++..+.
T Consensus 211 i~~~~~-~g~~~~~~ 224 (300)
T 2qc5_A 211 IGRITT-TGEISEYD 224 (300)
T ss_dssp EEEECT-TCCEEEEE
T ss_pred EEEEcC-CCcEEEEE
Confidence 999999 56665553
No 181
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=51.81 E-value=1.5e+02 Score=27.38 Aligned_cols=69 Identities=9% Similarity=0.036 Sum_probs=46.6
Q ss_pred CCeEEEEEecC------CCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCC-EEEEEE-cCcEEEEEe
Q 036391 257 EGCLCVFCFYN------LVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEV-RREKLVWFD 328 (389)
Q Consensus 257 ~G~L~~~~~~~------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~-~~~~l~~yd 328 (389)
+++||+..... ...=.||+++- ..+..+.+|+... ...-+.+.++|+ .++... .++.+.++|
T Consensus 330 g~rlyVa~~~~~~gthk~~s~~VsVID~----~T~kvv~~I~vg~------~P~gia~spDg~~~lyv~n~~s~~VsVID 399 (426)
T 3c75_H 330 SDRIYLLVDQRDEWKHKAASRFVVVLNA----ETGERINKIELGH------EIDSINVSQDAEPLLYALSAGTQTLHIYD 399 (426)
T ss_dssp GTEEEEEEEECCTTCTTSCEEEEEEEET----TTCCEEEEEEEEE------EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecccccccccCCCCEEEEEEC----CCCeEEEEEECCC------CcCeEEEccCCCEEEEEEcCCCCeEEEEE
Confidence 56777775421 11346888884 4567777776532 234567788998 777665 367899999
Q ss_pred CCCCcEE
Q 036391 329 LETNSLR 335 (389)
Q Consensus 329 ~~~~~~~ 335 (389)
+.+.+..
T Consensus 400 ~~t~kvv 406 (426)
T 3c75_H 400 AATGEEL 406 (426)
T ss_dssp TTTCCEE
T ss_pred CCCCCEE
Confidence 9998865
No 182
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=51.76 E-value=1.9e+02 Score=28.71 Aligned_cols=203 Identities=10% Similarity=0.048 Sum_probs=100.3
Q ss_pred ecceEEEeeCCceEEEEcCCcccccccCCCCC---CCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 93 CNGLIALCNSVQELALFNPSTRKLKTLPLPPC---FVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 93 ~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~---~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
.+|-|-+.....-+..++|.++.+..+...+. ..... .....++..|.... +++... ...+..|
T Consensus 322 ~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~v~~i~~d~~g~----lWigt~--------~~Gl~~~ 388 (781)
T 3v9f_A 322 SFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLS-NKVVSSVCDDGQGK----LWIGTD--------GGGINVF 388 (781)
T ss_dssp SSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCS-SSCEEEEEECTTSC----EEEEEB--------SSCEEEE
T ss_pred CCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCC-CcceEEEEEcCCCC----EEEEeC--------CCcEEEE
Confidence 35555555445568888998887776643210 00111 12234454453221 334321 1235667
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCC
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYA 247 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~ 247 (389)
+..++.++.... + .......-.+++. +|.+ |++.. ...|..||..++++..+..+ ... ..
T Consensus 389 ~~~~~~~~~~~~-~----------~~~~~~~v~~i~~d~~g~l-Wigt~---~~Gl~~~~~~~~~~~~~~~~-~~~--~~ 450 (781)
T 3v9f_A 389 ENGKRVAIYNKE-N----------RELLSNSVLCSLKDSEGNL-WFGTY---LGNISYYNTRLKKFQIIELE-KNE--LL 450 (781)
T ss_dssp ETTEEEEECC----------------CCCSBEEEEEECTTSCE-EEEET---TEEEEEECSSSCEEEECCST-TTC--CC
T ss_pred ECCCCeEEEccC-C----------CCCCCcceEEEEECCCCCE-EEEec---cCCEEEEcCCCCcEEEeccC-CCC--CC
Confidence 777666654421 1 0000011123333 4655 55542 35799999999999887654 111 12
Q ss_pred ceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEE
Q 036391 248 NVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVW 326 (389)
Q Consensus 248 ~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~ 326 (389)
.. ..+.+. +|.|.+... . . ++.++.. ...|............ .....-+....+| .|.+.+....|+.
T Consensus 451 ~v-~~i~~d~~g~lwigt~--~-G--l~~~~~~--~~~~~~~~~~~~~~~~--~~~i~~i~~d~~g-~lWigt~~~Gl~~ 519 (781)
T 3v9f_A 451 DV-RVFYEDKNKKIWIGTH--A-G--VFVIDLA--SKKVIHHYDTSNSQLL--ENFVRSIAQDSEG-RFWIGTFGGGVGI 519 (781)
T ss_dssp CE-EEEEECTTSEEEEEET--T-E--EEEEESS--SSSCCEEECTTTSSCS--CSCEEEEEECTTC-CEEEEESSSCEEE
T ss_pred eE-EEEEECCCCCEEEEEC--C-c--eEEEeCC--CCeEEecccCcccccc--cceeEEEEEcCCC-CEEEEEcCCCEEE
Confidence 22 234444 778777654 1 3 4444431 2346544322211110 1122333344444 5777776556999
Q ss_pred EeCCCCcEEEE
Q 036391 327 FDLETNSLRTV 337 (389)
Q Consensus 327 yd~~~~~~~~v 337 (389)
||+++++++.+
T Consensus 520 ~~~~~~~~~~~ 530 (781)
T 3v9f_A 520 YTPDMQLVRKF 530 (781)
T ss_dssp ECTTCCEEEEE
T ss_pred EeCCCCeEEEc
Confidence 99999888766
No 183
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=51.56 E-value=1.1e+02 Score=26.01 Aligned_cols=101 Identities=9% Similarity=0.043 Sum_probs=52.5
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCe-EEEEEecC----CCeEEEEEEeeCCCCCCeEEEEEEcCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGC-LCVFCFYN----LVYVDMWMMKEHAVKESWTKLISVQEP 294 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~-L~~~~~~~----~~~l~iW~l~~~~~~~~W~~~~~i~~~ 294 (389)
..|..+|+.+.++..+. ... .. -.++.. +|+ |+++.... ...+.+|.++. ........+...
T Consensus 169 ~~v~~~d~~~g~~~~~~---~~~---~p--~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~----~~l~~~~~~~~~ 236 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA---DLD---HP--NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD----GALHDRRHFASV 236 (305)
T ss_dssp EEEEEECSSSCCCEEEE---EES---SE--EEEEECTTSSEEEEEECCC---CCCEEEEEEEET----TEEEEEEEEECC
T ss_pred CeEEEEcCCCCcEEEEe---cCC---CC--cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecC----CCccCCeEEEEC
Confidence 57999999888777654 111 11 123333 565 55554431 12444444442 112211111110
Q ss_pred CCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEEEE
Q 036391 295 TPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 295 ~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v~~ 339 (389)
. . ....-+++.++|. |++.. ...+..||++++....+..
T Consensus 237 ~-~---~~pdgi~~d~~G~-lwv~~-~~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 237 P-D---GLPDGFCVDRGGW-LWSSS-GTGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp S-S---SCCCSEEECTTSC-EEECC-SSEEEEECTTSCEEEEEEC
T ss_pred C-C---CCCCeEEECCCCC-EEEec-CCcEEEECCCCCEEEEEEC
Confidence 0 0 1123356666776 55554 4469999998888877765
No 184
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=51.49 E-value=1.1e+02 Score=25.60 Aligned_cols=196 Identities=12% Similarity=0.152 Sum_probs=97.8
Q ss_pred EEeeecceEEEeeC-CceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEE
Q 036391 89 VLGSCNGLIALCNS-VQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVE 167 (389)
Q Consensus 89 ~~~s~~GLl~l~~~-~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~ 167 (389)
+....+|-+.+... ...++++||. ++...++.+.. .....++.+++.. . +. +... ....+.
T Consensus 67 i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~------~~~~~~i~~~~~g-~--l~-v~~~-------~~~~i~ 128 (300)
T 2qc5_A 67 LIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQP------DSGPYGITEGLNG-D--IW-FTQL-------NGDRIG 128 (300)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSST------TCCEEEEEECSTT-C--EE-EEET-------TTTEEE
T ss_pred EEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCC------CCCCccceECCCC-C--EE-EEcc-------CCCeEE
Confidence 33345666665543 4678999998 66655443321 1223456666532 2 22 2211 123566
Q ss_pred EEEcCCCcEEEcccCCcccccccccccccccccCceee--ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccC
Q 036391 168 VYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVL--AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVS 245 (389)
Q Consensus 168 Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~--~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~ 245 (389)
+|+.. +...... .+. .. ....++. -+|.+|+... ....|..||. +.++..+..|....
T Consensus 129 ~~~~~-g~~~~~~-~~~----------~~--~~~~~i~~d~~g~l~v~~~---~~~~i~~~~~-~g~~~~~~~~~~~~-- 188 (300)
T 2qc5_A 129 KLTAD-GTIYEYD-LPN----------KG--SYPAFITLGSDNALWFTEN---QNNSIGRITN-TGKLEEYPLPTNAA-- 188 (300)
T ss_dssp EECTT-SCEEEEE-CSS----------TT--CCEEEEEECTTSSEEEEET---TTTEEEEECT-TCCEEEEECSSTTC--
T ss_pred EECCC-CCEEEcc-CCC----------CC--CCceeEEECCCCCEEEEec---CCCeEEEECC-CCcEEEeeCCCCCC--
Confidence 77766 5554332 110 00 1112233 3578766533 2357999999 66666666654331
Q ss_pred CCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcE
Q 036391 246 YANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REK 323 (389)
Q Consensus 246 ~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~ 323 (389)
. ...+... +|.|++...... .+ ++++.. ..+... .+.. . .....-+++.++|. +++... ...
T Consensus 189 -~--~~~i~~d~~g~l~v~~~~~~-~i--~~~~~~---g~~~~~-~~~~-~----~~~~~~i~~d~~g~-l~v~~~~~~~ 252 (300)
T 2qc5_A 189 -A--PVGITSGNDGALWFVEIMGN-KI--GRITTT---GEISEY-DIPT-P----NARPHAITAGKNSE-IWFTEWGANQ 252 (300)
T ss_dssp -C--EEEEEECTTSSEEEEETTTT-EE--EEECTT---CCEEEE-ECSS-T----TCCEEEEEECSTTC-EEEEETTTTE
T ss_pred -C--cceEEECCCCCEEEEccCCC-EE--EEEcCC---CcEEEE-ECCC-C----CCCceEEEECCCCC-EEEeccCCCe
Confidence 1 1234443 788887764432 34 344431 233222 1221 1 11223455556665 666653 467
Q ss_pred EEEEeCCCCcEEEEEE
Q 036391 324 LVWFDLETNSLRTVKI 339 (389)
Q Consensus 324 l~~yd~~~~~~~~v~~ 339 (389)
+..||+ ++++..+.+
T Consensus 253 i~~~~~-~g~~~~~~~ 267 (300)
T 2qc5_A 253 IGRITN-DNTIQEYQL 267 (300)
T ss_dssp EEEECT-TSCEEEEEC
T ss_pred EEEECC-CCcEEEEEC
Confidence 999999 566665544
No 185
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=51.35 E-value=1.8e+02 Score=28.25 Aligned_cols=154 Identities=9% Similarity=0.077 Sum_probs=75.5
Q ss_pred ceeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCe-EEEEccC-CCCCcEEEEEECCCc-eeeeeCC
Q 036391 162 VEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGA-LHWVSPK-SSTRSVIMAFNLVAK-EFYQLPL 238 (389)
Q Consensus 162 ~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~-lywl~~~-~~~~~~il~fD~~~e-~~~~i~~ 238 (389)
....+.+++..++.-+.+..... +......-...-+|. ++..... ......|..+|+.+. ....+.-
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~ 302 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEP----------KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFV 302 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSC----------TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred CeeEEEEEECCCCceEeeccCCC----------CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEE
Confidence 34678889988887655432110 000000011122564 4443222 122347888999887 5555421
Q ss_pred CCccccCCCc-eEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEE
Q 036391 239 PDSVNVSYAN-VHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKL 315 (389)
Q Consensus 239 P~~~~~~~~~-~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i 315 (389)
...... ... ..+. ..- +|++.++. .......||.++..+ . .+..+.... ......++++++|+.|
T Consensus 303 ~~~~~~-~~~~~~~~-~sp~~dg~~l~~~-~~~g~~~l~~~~~~~--~---~~~~l~~~~----~~v~~~~~~spdg~~l 370 (706)
T 2z3z_A 303 ETDKHY-VEPLHPLT-FLPGSNNQFIWQS-RRDGWNHLYLYDTTG--R---LIRQVTKGE----WEVTNFAGFDPKGTRL 370 (706)
T ss_dssp EECSSC-CCCCSCCE-ECTTCSSEEEEEE-CTTSSCEEEEEETTS--C---EEEECCCSS----SCEEEEEEECTTSSEE
T ss_pred ccCCCe-ECccCCce-eecCCCCEEEEEE-ccCCccEEEEEECCC--C---EEEecCCCC----eEEEeeeEEcCCCCEE
Confidence 111000 000 0011 122 67754443 333478899988322 2 222222211 1123346788888888
Q ss_pred EEEEcC-----cEEEEEeCCCCcEEEE
Q 036391 316 LLEVRR-----EKLVWFDLETNSLRTV 337 (389)
Q Consensus 316 ~l~~~~-----~~l~~yd~~~~~~~~v 337 (389)
++.... ..++.+|+++++.+.+
T Consensus 371 ~~~~~~~~~~~~~l~~~d~~~~~~~~l 397 (706)
T 2z3z_A 371 YFESTEASPLERHFYCIDIKGGKTKDL 397 (706)
T ss_dssp EEEESSSCTTCBEEEEEETTCCCCEES
T ss_pred EEEecCCCCceEEEEEEEcCCCCceec
Confidence 776542 2788899988776554
No 186
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=50.72 E-value=1.9e+02 Score=28.43 Aligned_cols=128 Identities=10% Similarity=-0.057 Sum_probs=65.0
Q ss_pred ceeeECCeEEEEccCCCCCcEEEEEECCCc--eeeeeCC-CCccccCCCceEEEEEEeCCeEEEEEecCC--CeEEEEEE
Q 036391 202 YGVLAGGALHWVSPKSSTRSVIMAFNLVAK--EFYQLPL-PDSVNVSYANVHVDVGSLEGCLCVFCFYNL--VYVDMWMM 276 (389)
Q Consensus 202 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~i~~-P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~--~~l~iW~l 276 (389)
..++.+|.+|.-+.. ..|.++|..+. .|+.-.. ..... ..........+|.+++...... ..=.|+.+
T Consensus 116 ~~~~~~g~v~v~~~d----g~l~AlDa~TG~~~W~~~~~~~~~~~---~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~ 188 (689)
T 1yiq_A 116 GVAVWKGKVYVGVLD----GRLEAIDAKTGQRAWSVDTRADHKRS---YTITGAPRVVNGKVVIGNGGAEFGVRGYVTAY 188 (689)
T ss_dssp CCEEETTEEEEECTT----SEEEEEETTTCCEEEEEECCSCTTSC---CBCCSCCEEETTEEEECCBCTTTCCBCEEEEE
T ss_pred ccEEECCEEEEEccC----CEEEEEECCCCCEeeeecCcCCCCCC---ccccCCcEEECCEEEEEeCCCccCCCCEEEEE
Confidence 346788999886433 57999999764 4665322 11110 0001112345777765432210 01234444
Q ss_pred eeCCCCCCeEEEEEEcCCCC---------------CC--------CcceeeeEEEEeCCCEEEEEEcCc-----------
Q 036391 277 KEHAVKESWTKLISVQEPTP---------------TR--------SFLFLRPLGYSRNGVKLLLEVRRE----------- 322 (389)
Q Consensus 277 ~~~~~~~~W~~~~~i~~~~~---------------~~--------~~~~~~p~~~~~~g~~i~l~~~~~----------- 322 (389)
+-...+..|.... ++.... .+ ........++.+++++|++...+.
T Consensus 189 D~~tG~~~W~~~~-~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~ 267 (689)
T 1yiq_A 189 DAETGKEAWRFYT-VPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQA 267 (689)
T ss_dssp ETTTCCEEEEEES-SCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTT
T ss_pred ECCCCcEEEEecc-cCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCC
Confidence 4221234565321 110000 00 000123567777778888876543
Q ss_pred --------EEEEEeCCCCcEEEE
Q 036391 323 --------KLVWFDLETNSLRTV 337 (389)
Q Consensus 323 --------~l~~yd~~~~~~~~v 337 (389)
.++++|++|++..+-
T Consensus 268 ~gd~~y~~~v~AlD~~TG~~~W~ 290 (689)
T 1yiq_A 268 KGDNLFLSSIVAVNADTGEYVWH 290 (689)
T ss_dssp CSCCTTTTEEEEEETTTCCEEEE
T ss_pred CCCceeeeeEEEEEccCCceeEe
Confidence 399999999987765
No 187
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=50.39 E-value=1.9e+02 Score=28.20 Aligned_cols=179 Identities=11% Similarity=0.026 Sum_probs=88.4
Q ss_pred CceEEEEcCCccccc-ccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEccc
Q 036391 103 VQELALFNPSTRKLK-TLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISN 181 (389)
Q Consensus 103 ~~~~~V~NP~T~~~~-~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~ 181 (389)
...+...+.-+.+.. .+|... .....++.||+..+ +|++... ....+..++......+.+..
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~-------~~~~~~l~~d~~~~--~lywtD~--------~~~~I~r~~~~g~~~~~v~~ 76 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTG-------VKEASALDFDVTDN--RIYWTDI--------SLKTISRAFMNGSALEHVVE 76 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCS-------CSCEEEEEEETTTT--EEEEEET--------TTTEEEEEETTSCSCEEEEC
T ss_pred CCcEEEEECCCCCcceEEEcCC-------CCceEEEEEECCCC--EEEEEEC--------CCCeEEEEECCCCCcEEEEe
Confidence 445666666554432 233322 22367888887654 3333321 22355566665544443321
Q ss_pred CCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe--
Q 036391 182 LPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-- 256 (389)
Q Consensus 182 ~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-- 256 (389)
.. . ....++.+ +|.|||... ....|.++|+....-..+-. ... .. ...++..
T Consensus 77 ~g------------~--~~P~GlAvD~~~~~LY~tD~---~~~~I~v~~~dG~~~~~l~~-~~l---~~--P~~iavdp~ 133 (628)
T 4a0p_A 77 FG------------L--DYPEGMAVDWLGKNLYWADT---GTNRIEVSKLDGQHRQVLVW-KDL---DS--PRALALDPA 133 (628)
T ss_dssp SS------------C--SCCCEEEEETTTTEEEEEET---TTTEEEEEETTSTTCEEEEC-SSC---CC--EEEEEEETT
T ss_pred CC------------C--CCcceEEEEeCCCEEEEEEC---CCCEEEEEecCCCcEEEEEe-CCC---CC--cccEEEccC
Confidence 11 1 12234444 589999743 34689999997654333321 111 11 1244444
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeee--EEEEeCCCEEEEEEc-CcEEEEEeCCCCc
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRP--LGYSRNGVKLLLEVR-REKLVWFDLETNS 333 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p--~~~~~~g~~i~l~~~-~~~l~~yd~~~~~ 333 (389)
+|.||...... .-.|++..-.|. .. ..+ +. . ...| +++..+++.||+... ...+..+|+.++.
T Consensus 134 ~G~lY~tD~g~--~~~I~r~~~dG~-~~-~~l--~~--~------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 134 EGFMYWTEWGG--KPKIDRAAMDGS-ER-TTL--VP--N------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp TTEEEEEECSS--SCEEEEEETTSC-SC-EEE--EC--S------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCeEEEeCCCC--CCEEEEEeCCCC-ce-EEE--EC--C------CCCcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 78888876532 234555543331 11 111 11 1 1234 444444566666543 3457777776655
Q ss_pred EE
Q 036391 334 LR 335 (389)
Q Consensus 334 ~~ 335 (389)
.+
T Consensus 200 ~~ 201 (628)
T 4a0p_A 200 RE 201 (628)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 188
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=50.15 E-value=1.2e+02 Score=25.80 Aligned_cols=111 Identities=11% Similarity=0.025 Sum_probs=61.4
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeC-CCCccccCCCceEEEEEEe-CCeEEEEEecC--------CCeEEEEE
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLP-LPDSVNVSYANVHVDVGSL-EGCLCVFCFYN--------LVYVDMWM 275 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~-~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~--------~~~l~iW~ 275 (389)
-+|.+ |++.. ..|..||+.+.++..+. .+.... ... .-.+... +|+|++..... ...-.||.
T Consensus 63 ~dG~l-~v~~~----~~l~~~d~~~g~~~~~~~~~~~~~--~~~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 63 QSGGY-VATIG----TKFCALNWKEQSAVVLATVDNDKK--NNR-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp TTSSE-EEEET----TEEEEEETTTTEEEEEEECCTTCS--SEE-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred CCCCE-EEEEC----CeEEEEECCCCcEEEEEecCCCCC--CCC-CCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 36774 44432 47999999998887763 322211 111 1233333 88988876432 12467888
Q ss_pred EeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeC--CCCcEE
Q 036391 276 MKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDL--ETNSLR 335 (389)
Q Consensus 276 l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~--~~~~~~ 335 (389)
++..+ .-..+. .. .....-++++++|+.+++... ..++..||+ +++++.
T Consensus 135 ~d~~g---~~~~~~--~~------~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~ 186 (297)
T 3g4e_A 135 LFPDH---HVKKYF--DQ------VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS 186 (297)
T ss_dssp ECTTS---CEEEEE--EE------ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE
T ss_pred EECCC---CEEEEe--ec------cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc
Confidence 87522 222211 10 011334667778887776643 457888875 566653
No 189
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=49.88 E-value=2e+02 Score=28.24 Aligned_cols=30 Identities=13% Similarity=0.019 Sum_probs=21.3
Q ss_pred ceeeECCeEEEEccCCCCCcEEEEEECCCc--eeee
Q 036391 202 YGVLAGGALHWVSPKSSTRSVIMAFNLVAK--EFYQ 235 (389)
Q Consensus 202 ~~v~~~G~lywl~~~~~~~~~il~fD~~~e--~~~~ 235 (389)
..++.+|.+|.-+.. ..|.++|..+. .|+.
T Consensus 112 ~~~~~~~~v~v~~~d----g~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 112 GVALWGDKVYVGTLD----GRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp CCEEEBTEEEEECTT----SEEEEEETTTCCEEEEE
T ss_pred ceEEECCEEEEEcCC----CEEEEEECCCCCEeeee
Confidence 346678999876433 58999998754 5665
No 190
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=49.85 E-value=1.2e+02 Score=25.58 Aligned_cols=67 Identities=15% Similarity=0.179 Sum_probs=39.5
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
|.+|+|... .++.+.|||+.|++...+-.... .......+.+.+.. .+ +.... ....+.+++.
T Consensus 34 S~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~-----~~~~V~~v~~~~~~-~~--l~sgs--------~Dg~v~iw~~ 96 (318)
T 4ggc_A 34 SSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQ-----PGEYISSVAWIKEG-NY--LAVGT--------SSAEVQLWDV 96 (318)
T ss_dssp CTTSEEEEE-ETTEEEEEETTTCCEEEEEECCS-----TTCCEEEEEECTTS-SE--EEEEE--------TTSEEEEEET
T ss_pred CCCCEEEEE-eCCEEEEEECCCCCEEEEEEecC-----CCCeEEEEEECCCC-CE--EEEEE--------CCCcEEEeec
Confidence 567766554 46789999999998766443321 12224455666543 23 22221 2346788888
Q ss_pred CCCc
Q 036391 172 KINS 175 (389)
Q Consensus 172 ~~~~ 175 (389)
.+++
T Consensus 97 ~~~~ 100 (318)
T 4ggc_A 97 QQQK 100 (318)
T ss_dssp TTTE
T ss_pred CCce
Confidence 8764
No 191
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=49.66 E-value=1.3e+02 Score=26.09 Aligned_cols=73 Identities=14% Similarity=0.118 Sum_probs=42.3
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCe-EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESW-TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W-~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
+|.+.+.+.. +..+.||.+......... .....+... .....-+++.+++..++-...++.+..||+++++..
T Consensus 38 d~~~l~sgs~-D~~v~iWd~~~~~~~~~~~~~~~~l~~h-----~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~ 111 (343)
T 2xzm_R 38 DSPVLISGSR-DKTVMIWKLYEEEQNGYFGIPHKALTGH-----NHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY 111 (343)
T ss_dssp CCCEEEEEET-TSCEEEEEECSSCCSSBSEEEEEEECCC-----SSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE
T ss_pred CCCEEEEEcC-CCEEEEEECCcCCcccccccccchhccC-----CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 4555444444 448999998753211111 122222211 112455677788887776766778999999887643
No 192
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=49.57 E-value=1.3e+02 Score=26.07 Aligned_cols=107 Identities=7% Similarity=-0.021 Sum_probs=57.3
Q ss_pred CeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEE
Q 036391 208 GALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTK 287 (389)
Q Consensus 208 G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~ 287 (389)
|.+||.... ...|..+|+.+.+...+..|... ......-+|++.+... . . |++++.. ......
T Consensus 61 ~~l~~~d~~---~~~i~~~d~~~~~~~~~~~~~~v-------~~i~~~~dg~l~v~~~--~-g--l~~~d~~--~g~~~~ 123 (326)
T 2ghs_A 61 GTAWWFNIL---ERELHELHLASGRKTVHALPFMG-------SALAKISDSKQLIASD--D-G--LFLRDTA--TGVLTL 123 (326)
T ss_dssp TEEEEEEGG---GTEEEEEETTTTEEEEEECSSCE-------EEEEEEETTEEEEEET--T-E--EEEEETT--TCCEEE
T ss_pred CEEEEEECC---CCEEEEEECCCCcEEEEECCCcc-------eEEEEeCCCeEEEEEC--C-C--EEEEECC--CCcEEE
Confidence 789998543 35799999998887777665322 1112334788777652 2 3 5555531 233433
Q ss_pred EEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-------CcEEEEEeCCCCcEEEE
Q 036391 288 LISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 288 ~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-------~~~l~~yd~~~~~~~~v 337 (389)
+..... . .......-+.+.++|. +++... ...++.|| +++.+.+
T Consensus 124 ~~~~~~-~--~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 124 HAELES-D--LPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp EECSST-T--CTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred EeeCCC-C--CCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 321110 0 0011233456666776 445432 24688888 4665544
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=49.01 E-value=1.2e+02 Score=25.64 Aligned_cols=147 Identities=10% Similarity=0.072 Sum_probs=75.5
Q ss_pred eeEEEEEEcCCC--cEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCC
Q 036391 163 EVEVEVYSLKIN--SWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPD 240 (389)
Q Consensus 163 ~~~~~Vyss~~~--~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~ 240 (389)
...+.+++.+++ .|+.-..-. .......+.-+|.++. +. ...|..||...+.--.+..|.
T Consensus 14 ~~~v~~~d~~tG~~~w~~~~~~~-------------~~~~~~~~~pdG~ilv-s~----~~~V~~~d~~G~~~W~~~~~~ 75 (276)
T 3no2_A 14 WNKIAIINKDTKEIVWEYPLEKG-------------WECNSVAATKAGEILF-SY----SKGAKMITRDGRELWNIAAPA 75 (276)
T ss_dssp CSEEEEEETTTTEEEEEEECCTT-------------CCCCEEEECTTSCEEE-EC----BSEEEEECTTSCEEEEEECCT
T ss_pred CCEEEEEECCCCeEEEEeCCCcc-------------CCCcCeEECCCCCEEE-eC----CCCEEEECCCCCEEEEEcCCC
Confidence 456778888777 577543210 0011112334787776 22 247999999544333355542
Q ss_pred ccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE
Q 036391 241 SVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV 319 (389)
Q Consensus 241 ~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~ 319 (389)
... .. .... .+|.+.++.... .-.|+.++..+ +.-|... +... .........-+.+..+|++++...
T Consensus 76 ~~~-----~~-~~~~~~dG~~lv~~~~~--~~~v~~vd~~G-k~l~~~~--~~~~-~~~~~~~~~~v~~~~~G~~lv~~~ 143 (276)
T 3no2_A 76 GCE-----MQ-TARILPDGNALVAWCGH--PSTILEVNMKG-EVLSKTE--FETG-IERPHAQFRQINKNKKGNYLVPLF 143 (276)
T ss_dssp TCE-----EE-EEEECTTSCEEEEEEST--TEEEEEECTTS-CEEEEEE--ECCS-CSSGGGSCSCCEECTTSCEEEEET
T ss_pred Ccc-----cc-ccEECCCCCEEEEecCC--CCEEEEEeCCC-CEEEEEe--ccCC-CCcccccccCceECCCCCEEEEec
Confidence 211 11 2222 377777765542 23566666433 3345432 2211 011111122345566888776665
Q ss_pred cCcEEEEEeCCCCcEEEEEE
Q 036391 320 RREKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 320 ~~~~l~~yd~~~~~~~~v~~ 339 (389)
.+++++.||++.+..-++..
T Consensus 144 ~~~~v~~~d~~G~~~w~~~~ 163 (276)
T 3no2_A 144 ATSEVREIAPNGQLLNSVKL 163 (276)
T ss_dssp TTTEEEEECTTSCEEEEEEC
T ss_pred CCCEEEEECCCCCEEEEEEC
Confidence 56789999999554444443
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=48.51 E-value=1.2e+02 Score=25.51 Aligned_cols=54 Identities=13% Similarity=0.041 Sum_probs=31.4
Q ss_pred CCeEEEE-------ccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-C-CeEEEEEe
Q 036391 207 GGALHWV-------SPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-E-GCLCVFCF 265 (389)
Q Consensus 207 ~G~lywl-------~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~-G~L~~~~~ 265 (389)
+|.+|+. ... ...|..||+.+.++..+..|..... ... ...+... + |.|+++..
T Consensus 28 ~g~l~~~~~~~~~~~~~---~~~i~~~d~~~g~~~~~~~~~~~~~-~~~-~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 28 NGDFYIVAPEVEVNGKP---AGEILRIDLKTGKKTVICKPEVNGY-GGI-PAGCQCDRDANQLFVADM 90 (314)
T ss_dssp TSCEEEEETTCEETTEE---CCEEEEECTTTCCEEEEECCEETTE-ECC-EEEEEECSSSSEEEEEET
T ss_pred CCCEEEEEeccccCCCC---CCEEEEEeCCCCcEEEEEecccCCC-CCC-CceEEEecCCCcEEEEEC
Confidence 6888886 221 2579999998888877655321100 011 1234443 5 78887764
No 195
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=48.30 E-value=8.9 Score=22.89 Aligned_cols=17 Identities=29% Similarity=0.542 Sum_probs=13.0
Q ss_pred CCCCcHHHHHHHHhcCC
Q 036391 2 SKKIPLDIIADIFCRQP 18 (389)
Q Consensus 2 ~~~LP~Dll~~IL~rLP 18 (389)
+..||.|+-+|||+--.
T Consensus 21 F~~LP~dIQ~Ells~~~ 37 (48)
T 2kwv_A 21 FKQLPADIQEEILSGKS 37 (48)
T ss_dssp TTTSCHHHHHHHTTCCC
T ss_pred HHHCcHHHHHHHHhcch
Confidence 46789999999887544
No 196
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=48.11 E-value=1.4e+02 Score=26.13 Aligned_cols=62 Identities=11% Similarity=0.150 Sum_probs=39.4
Q ss_pred CCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 268 LVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 268 ~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
+..+.||-++... ..........-.. ....-++++++|..++-...++.+.+||+++++...
T Consensus 102 dg~v~lWd~~~~~--~~~~~~~~~~~H~-----~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 102 SGAVELWELDENE--TLIVSKFCKYEHD-----DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp TSEEEEEEECTTS--SCEEEEEEEECCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCEEEEEeccCCC--ceeEeeccccCCC-----CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4489999987522 2233222221111 124567888899888877777779999999887543
No 197
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=47.95 E-value=2e+02 Score=27.91 Aligned_cols=27 Identities=15% Similarity=0.262 Sum_probs=20.9
Q ss_pred eeEEEEeCCCEEEEEEcCcEEEEEeCC
Q 036391 304 RPLGYSRNGVKLLLEVRREKLVWFDLE 330 (389)
Q Consensus 304 ~p~~~~~~g~~i~l~~~~~~l~~yd~~ 330 (389)
.-++++++|..|+....++.+.+||+.
T Consensus 666 ~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 666 TSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred eeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 446778899888887778889999875
No 198
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=47.29 E-value=63 Score=31.35 Aligned_cols=31 Identities=13% Similarity=0.271 Sum_probs=27.6
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCc
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~ 333 (389)
..-+++++||..+..+..++.+..||+++++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 5678999999999999888899999999985
No 199
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=46.84 E-value=1.7e+02 Score=28.37 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=60.6
Q ss_pred CceeeECCeEEEEccCCCCCcEEEEEEC-CC--ceeeee-CCCCcccc--CCCceEEEEEE--eCCe----EEEEEecCC
Q 036391 201 GYGVLAGGALHWVSPKSSTRSVIMAFNL-VA--KEFYQL-PLPDSVNV--SYANVHVDVGS--LEGC----LCVFCFYNL 268 (389)
Q Consensus 201 ~~~v~~~G~lywl~~~~~~~~~il~fD~-~~--e~~~~i-~~P~~~~~--~~~~~~~~l~~--~~G~----L~~~~~~~~ 268 (389)
..++..+|.+|..+.. ...|.++|. .+ +.|+.- ..+..... ..+.....++. .+|+ |++.....
T Consensus 56 ~tP~v~~g~vyv~~~~---~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg- 131 (599)
T 1w6s_A 56 GAPLVVDGKMYIHTSF---PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDG- 131 (599)
T ss_dssp SCCEEETTEEEEECST---TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTS-
T ss_pred eccEEECCEEEEEeCC---CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCC-
Confidence 4568899999987541 246999998 55 456652 22211000 00000112333 4555 65543221
Q ss_pred CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc------CcEEEEEeCCCCcEEEE
Q 036391 269 VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR------REKLVWFDLETNSLRTV 337 (389)
Q Consensus 269 ~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~------~~~l~~yd~~~~~~~~v 337 (389)
.+..|+-...+..|.... .... ........|+.. ++.|++... ++.++.||.+|++..+-
T Consensus 132 ---~l~AlDa~TG~~~W~~~~--~~~~-~~~~~~ssP~v~---~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 132 ---NVAALNAETGETVWKVEN--SDIK-VGSTLTIAPYVV---KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp ---EEEEEETTTCCEEEEEEC--CCGG-GTCBCCSCCEEE---TTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ---EEEEEECCCCCEEEeecC--CCCC-ccceeecCCEEE---CCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 244444222244565431 1000 000001234443 356776542 45799999999987654
No 200
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=46.08 E-value=1.5e+02 Score=25.89 Aligned_cols=33 Identities=12% Similarity=0.119 Sum_probs=25.5
Q ss_pred eeeEEEEeCCCEEEEEEcCcE-EEEEeCCCCcEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREK-LVWFDLETNSLR 335 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~-l~~yd~~~~~~~ 335 (389)
..-++++++|..++-+..++. +..||+++++..
T Consensus 198 v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~ 231 (355)
T 3vu4_A 198 IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLV 231 (355)
T ss_dssp EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEE
T ss_pred eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 556788889888777777776 999999987643
No 201
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=46.07 E-value=1.3e+02 Score=25.26 Aligned_cols=144 Identities=13% Similarity=0.110 Sum_probs=80.1
Q ss_pred eeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCce-eeeeCCCCc
Q 036391 163 EVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKE-FYQLPLPDS 241 (389)
Q Consensus 163 ~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~~P~~ 241 (389)
...+.+++..+++=.....++. . .....-+..++.+|-++.. ...+.+||..+-+ -..++.|..
T Consensus 42 ~S~v~~vD~~tgkv~~~~~l~~----------~--~fgeGi~~~~~~ly~ltw~---~~~v~v~D~~tl~~~~ti~~~~~ 106 (243)
T 3mbr_X 42 RSSVRKVDLETGRILQRAEVPP----------P--YFGAGIVAWRDRLIQLTWR---NHEGFVYDLATLTPRARFRYPGE 106 (243)
T ss_dssp SCEEEEEETTTCCEEEEEECCT----------T--CCEEEEEEETTEEEEEESS---SSEEEEEETTTTEEEEEEECSSC
T ss_pred CceEEEEECCCCCEEEEEeCCC----------C--cceeEEEEeCCEEEEEEee---CCEEEEEECCcCcEEEEEeCCCC
Confidence 4578899999885433323331 0 0111224567899988654 4589999998744 455776642
Q ss_pred cccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-
Q 036391 242 VNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR- 320 (389)
Q Consensus 242 ~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~- 320 (389)
+ ..|+.-+++|++... .. .|++++-. .=..+.+|.............-+-. .+| .|+....
T Consensus 107 ------G--wglt~dg~~L~vSdg-s~---~l~~iDp~----t~~~~~~I~V~~~g~~~~~lNeLe~-~~G-~lyanvw~ 168 (243)
T 3mbr_X 107 ------G--WALTSDDSHLYMSDG-TA---VIRKLDPD----TLQQVGSIKVTAGGRPLDNLNELEW-VNG-ELLANVWL 168 (243)
T ss_dssp ------C--CEEEECSSCEEEECS-SS---EEEEECTT----TCCEEEEEECEETTEECCCEEEEEE-ETT-EEEEEETT
T ss_pred ------c--eEEeeCCCEEEEECC-CC---eEEEEeCC----CCeEEEEEEEccCCcccccceeeEE-eCC-EEEEEECC
Confidence 1 245666777888753 22 36777642 2234455554221000011111121 244 5776653
Q ss_pred CcEEEEEeCCCCcEE-EEEE
Q 036391 321 REKLVWFDLETNSLR-TVKI 339 (389)
Q Consensus 321 ~~~l~~yd~~~~~~~-~v~~ 339 (389)
+..+...|+++++.. .|.+
T Consensus 169 s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp TTEEEEECTTTCBEEEEEEC
T ss_pred CCeEEEEECCCCCEEEEEEC
Confidence 567999999999875 4554
No 202
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=45.51 E-value=1.5e+02 Score=25.65 Aligned_cols=183 Identities=11% Similarity=0.082 Sum_probs=88.4
Q ss_pred cceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCC
Q 036391 94 NGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKI 173 (389)
Q Consensus 94 ~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~ 173 (389)
+|.++....+..+.+||..+++....-... ......+.+.|... ++.... ....+.+|+.++
T Consensus 154 ~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h-------~~~v~~~~~~~~~~---~l~sg~--------~d~~v~~wd~~~ 215 (340)
T 1got_B 154 DNQIVTSSGDTTCALWDIETGQQTTTFTGH-------TGDVMSLSLAPDTR---LFVSGA--------CDASAKLWDVRE 215 (340)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCC-------SSCEEEEEECTTSS---EEEEEE--------TTSCEEEEETTT
T ss_pred CCcEEEEECCCcEEEEECCCCcEEEEEcCC-------CCceEEEEECCCCC---EEEEEe--------CCCcEEEEECCC
Confidence 344444445667889998887654322111 11234455665322 222221 233577888876
Q ss_pred CcEEEcccCCcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceee-eeCCCCccccCCCceE
Q 036391 174 NSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFY-QLPLPDSVNVSYANVH 250 (389)
Q Consensus 174 ~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~ 250 (389)
+.-... .. .+. ..-.++.+ +|.....++. ...|..+|+.+.+-. .+..+... ...
T Consensus 216 ~~~~~~--~~----------~h~--~~v~~v~~~p~~~~l~s~s~---d~~v~iwd~~~~~~~~~~~~~~~~----~~v- 273 (340)
T 1got_B 216 GMCRQT--FT----------GHE--SDINAICFFPNGNAFATGSD---DATCRLFDLRADQELMTYSHDNII----CGI- 273 (340)
T ss_dssp CSEEEE--EC----------CCS--SCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEECCTTCC----SCE-
T ss_pred CeeEEE--Ec----------CCc--CCEEEEEEcCCCCEEEEEcC---CCcEEEEECCCCcEEEEEccCCcc----cce-
Confidence 642211 11 000 00011222 3544333322 346888998775432 23322211 111
Q ss_pred EEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEe
Q 036391 251 VDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFD 328 (389)
Q Consensus 251 ~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd 328 (389)
..+.-. +|.+.+++.. +..+.+|-+.. ......+.... ....-++++++|..++-...++.+..||
T Consensus 274 ~~~~~s~~g~~l~~g~~-d~~i~vwd~~~------~~~~~~~~~h~-----~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 274 TSVSFSKSGRLLLAGYD-DFNCNVWDALK------ADRAGVLAGHD-----NRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEECTTSSEEEEEET-TSEEEEEETTT------CCEEEEEECCS-----SCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECCCCCEEEEECC-CCeEEEEEccc------CcEeeEeecCC-----CcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 122222 6776666554 44899998754 12333333211 1244567777887777666666677665
No 203
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=45.48 E-value=2.1e+02 Score=27.35 Aligned_cols=67 Identities=10% Similarity=0.069 Sum_probs=41.4
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
+|...++....+..+.+|.+.. ......+.-.. ....-++++++|..++-...++.+..||..+++.
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~------~~~~~~l~~H~-----~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPP------FKFKSTFGEHT-----KFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTT------BEEEEEECCCS-----SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCeEEEEEeCCCeEEEEECCC------CeEeeeecccc-----CceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 4554445554555899997542 23344443211 1355677888888777776677799999877654
No 204
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=44.24 E-value=68 Score=28.91 Aligned_cols=73 Identities=7% Similarity=0.198 Sum_probs=43.0
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCC-CEEEEEEcCcEEEEEeCCCCcE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNG-VKLLLEVRREKLVWFDLETNSL 334 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g-~~i~l~~~~~~l~~yd~~~~~~ 334 (389)
+|.+.+.+ .+..+.||-++..+ ..+.. ..+....+........-++++++| ..++....++.+..||+++++.
T Consensus 188 ~~~~l~s~--~d~~i~iwd~~~~~--~~~~~-~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 188 DYETYLSA--DDLRINLWHLEITD--RSFNI-VDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TSSEEEEE--CSSEEEEEETTEEE--EEEEE-EECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCEEEEe--CCCeEEEEECCCCC--ceeee-eecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 66666555 35589999887421 11211 111111111222235567778887 7777777777899999988764
No 205
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=43.97 E-value=1.4e+02 Score=24.88 Aligned_cols=191 Identities=10% Similarity=0.024 Sum_probs=89.5
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
+.+++++....++.+.|||..+++....-... ......+.+.+.. .+ +.... ....+.+++.
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~-------~~~v~~~~~~~~~-~~--l~~~~--------~dg~i~~~~~ 88 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG-------QGFLNSVCYDSEK-EL--LLFGG--------KDTMINGVPL 88 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEEC-------SSCEEEEEEETTT-TE--EEEEE--------TTSCEEEEET
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC-------CccEEEEEECCCC-CE--EEEec--------CCCeEEEEEe
Confidence 33446555556778999998776644332211 1123445566532 22 22221 1224556665
Q ss_pred CCCc-EEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceE
Q 036391 172 KINS-WRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVH 250 (389)
Q Consensus 172 ~~~~-W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 250 (389)
.... .+.+.... .+. ..-.++..+|.....+.. ...|..+|... ....+...... -..
T Consensus 89 ~~~~~~~~~~~~~----------~~~--~~i~~~~~~~~~l~~~~~---d~~i~~~d~~~-~~~~~~~~~~~-----v~~ 147 (313)
T 3odt_A 89 FATSGEDPLYTLI----------GHQ--GNVCSLSFQDGVVISGSW---DKTAKVWKEGS-LVYNLQAHNAS-----VWD 147 (313)
T ss_dssp TCCTTSCC-CEEC----------CCS--SCEEEEEEETTEEEEEET---TSEEEEEETTE-EEEEEECCSSC-----EEE
T ss_pred eecCCCCcccchh----------hcc--cCEEEEEecCCEEEEEeC---CCCEEEEcCCc-EEEecccCCCc-----eeE
Confidence 4321 11111111 000 111234445554444332 35688888322 22223222111 112
Q ss_pred EEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC
Q 036391 251 VDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE 330 (389)
Q Consensus 251 ~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~ 330 (389)
......++.+.+++.. +..+.+|-... ....+.... .....-+++.+++. ++....++.+..||++
T Consensus 148 ~~~~~~~~~~l~~~~~-d~~i~i~d~~~--------~~~~~~~~~----~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~ 213 (313)
T 3odt_A 148 AKVVSFSENKFLTASA-DKTIKLWQNDK--------VIKTFSGIH----NDVVRHLAVVDDGH-FISCSNDGLIKLVDMH 213 (313)
T ss_dssp EEEEETTTTEEEEEET-TSCEEEEETTE--------EEEEECSSC----SSCEEEEEEEETTE-EEEEETTSEEEEEETT
T ss_pred EEEccCCCCEEEEEEC-CCCEEEEecCc--------eEEEEeccC----cccEEEEEEcCCCe-EEEccCCCeEEEEECC
Confidence 2233336666555544 34788996221 222222211 11245567777776 6666667789999998
Q ss_pred CCcEE
Q 036391 331 TNSLR 335 (389)
Q Consensus 331 ~~~~~ 335 (389)
+++..
T Consensus 214 ~~~~~ 218 (313)
T 3odt_A 214 TGDVL 218 (313)
T ss_dssp TCCEE
T ss_pred chhhh
Confidence 87644
No 206
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=43.90 E-value=1.6e+02 Score=25.66 Aligned_cols=94 Identities=5% Similarity=-0.074 Sum_probs=55.2
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
..|..+|+.++....+....... .... .+.. -+|.+.+++.. +..+.+|-+.. . .+..+....
T Consensus 141 ~~i~iwd~~~~~~~~~~~~~~~~---~~v~-~~~~~~~~~~l~~~~~-d~~i~i~d~~~---~----~~~~~~~h~---- 204 (383)
T 3ei3_B 141 GATTLRDFSGSVIQVFAKTDSWD---YWYC-CVDVSVSRQMLATGDS-TGRLLLLGLDG---H----EIFKEKLHK---- 204 (383)
T ss_dssp TEEEEEETTSCEEEEEECCCCSS---CCEE-EEEEETTTTEEEEEET-TSEEEEEETTS---C----EEEEEECSS----
T ss_pred CEEEEEECCCCceEEEeccCCCC---CCeE-EEEECCCCCEEEEECC-CCCEEEEECCC---C----EEEEeccCC----
Confidence 57889999987776665443221 1112 2322 36665555444 44899998842 1 222332211
Q ss_pred cceeeeEEEEeCCC-EEEEEEcCcEEEEEeCCC
Q 036391 300 FLFLRPLGYSRNGV-KLLLEVRREKLVWFDLET 331 (389)
Q Consensus 300 ~~~~~p~~~~~~g~-~i~l~~~~~~l~~yd~~~ 331 (389)
....-+++++++. .++....++.+..||+++
T Consensus 205 -~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 205 -AKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp -SCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred -CcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 1245567777777 666666677899999887
No 207
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=43.52 E-value=1.9e+02 Score=26.17 Aligned_cols=112 Identities=7% Similarity=-0.018 Sum_probs=60.4
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE--eCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
.+|.|||... ....|.++|+....-..+-. ... .. ...++. .+|.|++...... -.|++..-.|. .
T Consensus 169 ~~~~lY~~d~---~~~~I~~~~~~g~~~~~l~~-~~~---~~--P~~iavdp~~g~ly~td~~~~--~~I~~~~~dG~-~ 236 (400)
T 3p5b_L 169 IHSNIYWTDS---VLGTVSVADTKGVKRKTLFR-ENG---SK--PRAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGV-D 236 (400)
T ss_dssp TTTEEEEEET---TTTEEEEECTTTCSEEEEEE-CSS---CC--EEEEEEETTTTEEEEEECSSS--CCEEEEETTSC-S
T ss_pred cCCceEEEEC---CCCeEEEEeCCCCceEEEEe-CCC---CC--cceEEEecccCeEEEEeCCCC--CEEEEEeCCCC-c
Confidence 3689999854 34589999998765444311 111 11 123444 4788887765432 24566554331 1
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
. +. .+. ..+ ....-+++..+++.||+... ...+..+|++....+.+
T Consensus 237 ~--~~-~~~-~~l----~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (400)
T 3p5b_L 237 I--YS-LVT-ENI----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 283 (400)
T ss_dssp C--EE-EEC-SSC----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEE
T ss_pred c--EE-EEE-CCC----CceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEE
Confidence 1 11 111 111 11233555555677777654 34688888887666655
No 208
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=43.27 E-value=1.6e+02 Score=25.20 Aligned_cols=194 Identities=12% Similarity=0.129 Sum_probs=100.2
Q ss_pred cceEEEeeC---CceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 94 NGLIALCNS---VQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 94 ~GLl~l~~~---~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+|.|..... .+.+.+.|+.|++... +|... .....|+..+. + ++.... .....+.||
T Consensus 31 dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-------~~fgeGi~~~g--~--~lyv~t--------~~~~~v~vi 91 (266)
T 2iwa_A 31 NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-------SYFGEGLTLLN--E--KLYQVV--------WLKNIGFIY 91 (266)
T ss_dssp TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-------TCCEEEEEEET--T--EEEEEE--------TTCSEEEEE
T ss_pred CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-------CcceEEEEEeC--C--EEEEEE--------ecCCEEEEE
Confidence 476666542 4689999999988654 33221 11223444442 2 333332 134578889
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCce-eeeeCCCCccccCCCc
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKE-FYQLPLPDSVNVSYAN 248 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~ 248 (389)
+..+. +.+...+ .. .....++..+|.-.|.+. ....|..+|+.+.+ -..|+....... ...
T Consensus 92 D~~t~--~v~~~i~----------~g--~~~g~glt~Dg~~l~vs~---gs~~l~viD~~t~~v~~~I~Vg~~~~p-~~~ 153 (266)
T 2iwa_A 92 DRRTL--SNIKNFT----------HQ--MKDGWGLATDGKILYGSD---GTSILYEIDPHTFKLIKKHNVKYNGHR-VIR 153 (266)
T ss_dssp ETTTT--EEEEEEE----------CC--SSSCCEEEECSSSEEEEC---SSSEEEEECTTTCCEEEEEECEETTEE-CCC
T ss_pred ECCCC--cEEEEEE----------CC--CCCeEEEEECCCEEEEEC---CCCeEEEEECCCCcEEEEEEECCCCcc-ccc
Confidence 98765 2333333 11 012234666665444443 24689999998744 444554321100 000
Q ss_pred eEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC--------CCcceeeeEEEEeCCCEEEEEEc
Q 036391 249 VHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT--------RSFLFLRPLGYSRNGVKLLLEVR 320 (389)
Q Consensus 249 ~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~--------~~~~~~~p~~~~~~g~~i~l~~~ 320 (389)
--.+...+|+|++...... .|.+++- ..+..+..|+..... .......-+++.++++.+|+...
T Consensus 154 -~nele~~dg~lyvn~~~~~---~V~vID~----~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk 225 (266)
T 2iwa_A 154 -LNELEYINGEVWANIWQTD---CIARISA----KDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK 225 (266)
T ss_dssp -EEEEEEETTEEEEEETTSS---EEEEEET----TTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET
T ss_pred -ceeEEEECCEEEEecCCCC---eEEEEEC----CCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC
Confidence 0122333888886654433 5777774 345566667653110 00112234566677888777643
Q ss_pred -CcEEEEEeCCCC
Q 036391 321 -REKLVWFDLETN 332 (389)
Q Consensus 321 -~~~l~~yd~~~~ 332 (389)
..+++..++.+.
T Consensus 226 ~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 226 LWPKLFEIKLHLV 238 (266)
T ss_dssp TCSEEEEEEEEEC
T ss_pred CCCeEEEEEEecc
Confidence 346777666554
No 209
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=43.23 E-value=2.5e+02 Score=27.55 Aligned_cols=33 Identities=9% Similarity=0.141 Sum_probs=24.8
Q ss_pred eEEEEeCCCEEEEEEcCc-------------------EEEEEeCCCCcEEEE
Q 036391 305 PLGYSRNGVKLLLEVRRE-------------------KLVWFDLETNSLRTV 337 (389)
Q Consensus 305 p~~~~~~g~~i~l~~~~~-------------------~l~~yd~~~~~~~~v 337 (389)
.+.+.++++.|++...+. .++.+|.+|++..+-
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~ 298 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWH 298 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEE
Confidence 456677788888875432 499999999987765
No 210
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=42.85 E-value=1.9e+02 Score=26.07 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=49.6
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
..|..+|+.++....+....... .. ...+.. -+|.+.+++. .+..+.+|-++. ...+ .+. +.
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~g~-~dg~i~~wd~~~---~~~~----~~~-----~h 249 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTIN---IW-FCSLDVSASSRMVVTGD-NVGNVILLNMDG---KELW----NLR-----MH 249 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCS---CC-CCCEEEETTTTEEEEEC-SSSBEEEEESSS---CBCC----CSB-----CC
T ss_pred CEEEEeeccCCceeEEeccCCCC---cc-EEEEEECCCCCEEEEEe-CCCcEeeeccCc---ceeE----EEe-----cc
Confidence 46888999988777664433221 00 112222 2566555544 344899998753 1111 111 11
Q ss_pred cceeeeEEEEeCCCEEE-EEEcCcEEEEEeCCCC
Q 036391 300 FLFLRPLGYSRNGVKLL-LEVRREKLVWFDLETN 332 (389)
Q Consensus 300 ~~~~~p~~~~~~g~~i~-l~~~~~~l~~yd~~~~ 332 (389)
.....-++++++++.++ ....++.+.+||+++.
T Consensus 250 ~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 250 KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred cceEEeeeecCCCceEEEEecCcceeeEEecccc
Confidence 11234456666665444 3445566778887664
No 211
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=42.68 E-value=1.9e+02 Score=25.96 Aligned_cols=209 Identities=9% Similarity=-0.006 Sum_probs=100.2
Q ss_pred ecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 93 CNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 93 ~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
.+|.|.+.+ ....++.+++.++....+..... . ...++.+|+..+. +++.. .....+++++.
T Consensus 126 ~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~--~-----~p~glavd~~~g~--lY~~d--------~~~~~I~~~~~ 188 (386)
T 3v65_B 126 RRELVFWSDVTLDRILRANLNGSNVEEVVSTGL--E-----SPGGLAVDWVHDK--LYWTD--------SGTSRIEVANL 188 (386)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCCEEEEECSSC--S-----CCCCEEEETTTTE--EEEEE--------TTTTEEEECBT
T ss_pred CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCC--C-----CccEEEEEeCCCe--EEEEc--------CCCCeEEEEeC
Confidence 456666555 34567778887765444322211 1 1134566654443 22221 02235666666
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeE---CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCc
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYAN 248 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~ 248 (389)
....-+.+.... + ....++.+ +|.+||.... ....|..+|+....-..+-. ... ..
T Consensus 189 dg~~~~~l~~~~------------l--~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~~~~~~~-~~~---~~- 247 (386)
T 3v65_B 189 DGAHRKVLLWQS------------L--EKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGSGRRIIAD-THL---FW- 247 (386)
T ss_dssp TSCSCEEEECSS------------C--SCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSCSCEEEEC-SSC---SC-
T ss_pred CCCceEEeecCC------------C--CCCcEEEEEcCCCeEEEeccC--CCCEEEEEeCCCCCcEEEEE-CCC---CC-
Confidence 543322221100 0 11223333 5899997543 23689999997654333311 111 11
Q ss_pred eEEEEEE--eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEE
Q 036391 249 VHVDVGS--LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLV 325 (389)
Q Consensus 249 ~~~~l~~--~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~ 325 (389)
.-.|+. .+|+||++..... .|++.+-.+ ...- .+ +.. . ...|.++.-+++.+++... ..++.
T Consensus 248 -PnGlavd~~~~~lY~aD~~~~---~I~~~d~dG-~~~~-~~--~~~-~------~~~P~giav~~~~ly~td~~~~~V~ 312 (386)
T 3v65_B 248 -PNGLTIDYAGRRMYWVDAKHH---VIERANLDG-SHRK-AV--ISQ-G------LPHPFAITVFEDSLYWTDWHTKSIN 312 (386)
T ss_dssp -EEEEEEEGGGTEEEEEETTTT---EEEEECTTS-CSCE-EE--ECS-S------CSSEEEEEEETTEEEEEETTTTEEE
T ss_pred -eeeEEEeCCCCEEEEEECCCC---EEEEEeCCC-CeeE-EE--EEC-C------CCCceEEEEECCEEEEeeCCCCeEE
Confidence 123444 4888888875433 456665333 2211 11 111 1 1245554434566776643 45799
Q ss_pred EEeCCC-CcEEEEEEecCCCC-ceeeEEEEeccc
Q 036391 326 WFDLET-NSLRTVKIDTHGLD-FVDTEICMASLV 357 (389)
Q Consensus 326 ~yd~~~-~~~~~v~~~~~g~~-~~~~~~y~~Sl~ 357 (389)
.+|..+ +..+.|. .+.. -....+|.++.-
T Consensus 313 ~~~~~~G~~~~~i~---~~~~~p~gi~v~~~~~q 343 (386)
T 3v65_B 313 SANKFTGKNQEIIR---NKLHFPMDIHTLHPQRQ 343 (386)
T ss_dssp EEETTTCCSCEEEE---CSCSCCCCEEEESGGGS
T ss_pred EEECCCCcceEEEc---cCCCCCceEEEEchhcC
Confidence 999544 4455553 2322 234445555443
No 212
>1sgh_B Ezrin-radixin-moesin binding phosphoprotein 50; FERM-peptide complex, structural protein; 3.50A {Homo sapiens} SCOP: j.117.1.1
Probab=41.65 E-value=9.2 Score=21.85 Aligned_cols=11 Identities=36% Similarity=0.573 Sum_probs=8.9
Q ss_pred hhHHHhhhhcc
Q 036391 378 LEEKEKIHKKK 388 (389)
Q Consensus 378 ~~~~~~~~~~~ 388 (389)
.|.+|++|++|
T Consensus 9 Aeakek~~~Kr 19 (39)
T 1sgh_B 9 AMAKERAHQKR 19 (39)
T ss_pred HHHHHHHHhhc
Confidence 46788999887
No 213
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=40.39 E-value=1.8e+02 Score=25.02 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=55.6
Q ss_pred CcEEEEEECCCceeee-eCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC
Q 036391 220 RSVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT 297 (389)
Q Consensus 220 ~~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 297 (389)
...|..+|+.+..-.. +..... . -..+.-. +|++.+.+.. +..+.||-+.. -..+..+....
T Consensus 143 dg~v~i~~~~~~~~~~~~~~~~~------~-v~~~~~spdg~~lasg~~-dg~i~iwd~~~------~~~~~~~~~h~-- 206 (321)
T 3ow8_A 143 VGKVNIFGVESGKKEYSLDTRGK------F-ILSIAYSPDGKYLASGAI-DGIINIFDIAT------GKLLHTLEGHA-- 206 (321)
T ss_dssp TSEEEEEETTTCSEEEEEECSSS------C-EEEEEECTTSSEEEEEET-TSCEEEEETTT------TEEEEEECCCS--
T ss_pred CCcEEEEEcCCCceeEEecCCCc------e-EEEEEECCCCCEEEEEcC-CCeEEEEECCC------CcEEEEEcccC--
Confidence 3567788887654322 222111 1 1123333 6666555544 34899997763 12344444221
Q ss_pred CCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-++++++|..++....++.+..||+++++..
T Consensus 207 ---~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 207 ---MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp ---SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred ---CceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 12455788888887777766777999999887654
No 214
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=40.17 E-value=2.1e+02 Score=25.72 Aligned_cols=209 Identities=12% Similarity=0.129 Sum_probs=103.9
Q ss_pred eecceEEEeeCCceEEEEcCCcccccccCCCCCCCCCCCceeEEEE--eeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 92 SCNGLIALCNSVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGF--GQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 92 s~~GLl~l~~~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~--g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+..++++-......++|+|-.-++...||.... ..+-+ ++.-.....-++.+... .. ....+.+|
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G~~l~~~~~g~~--------nnVD~r~~~~l~g~~~dla~as~R-~~----~~n~l~vf 104 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDGKMLHSYNTGKL--------NNVDIRYDFPLNGKKVDIAAASNR-SE----GKNTIEIY 104 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTSCEEEEECCSCE--------EEEEEEEEEEETTEEEEEEEEEEC-ST----TCCEEEEE
T ss_pred CCccEEEEEcCCCCEEEEcCCCcEEEEccCCCc--------ccEEEecccccCCceEeEEEEeCC-CC----CCCeEEEE
Confidence 455666666666788999996666677765321 11111 22111111223333321 10 03468888
Q ss_pred Ec--CCCcEEEcccC--CcccccccccccccccccCceeeE-----CCeEEEEccCCCCCcEEEEEECC--------Cce
Q 036391 170 SL--KINSWRRISNL--PRFLRDFYDYLYHSLFRKGYGVLA-----GGALHWVSPKSSTRSVIMAFNLV--------AKE 232 (389)
Q Consensus 170 ss--~~~~W~~~~~~--p~~~~~~~~~~~~~~~~~~~~v~~-----~G~lywl~~~~~~~~~il~fD~~--------~e~ 232 (389)
+. .++.++.+... |.. .......++++ .|.+|-+..... ..+..|++. .+.
T Consensus 105 ~iDp~~~~l~~i~~~~~pv~----------t~~~~pyGlcly~~~~~g~~yafV~~k~--G~~~q~~l~~~~~g~~~~~l 172 (355)
T 3amr_A 105 AIDGKNGTLQSMTDPDHPIA----------TAINEVYGFTLYHSQKTGKYYAMVTGKE--GEFEQYELKADKNGYISGKK 172 (355)
T ss_dssp EECTTTCCEEECSCTTSCEE----------CCCSSCCCEEEEECTTTCCEEEEEECSS--SEEEEEEEEECTTSCEEEEE
T ss_pred EECCCCCceeeccccccCcC----------CCCCCeeEEEEEecCCCCcEEEEEECCC--CeEEEEEEEeCCCCcccceE
Confidence 55 67889998654 310 00012223433 366666655422 455555552 233
Q ss_pred eeeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCC-CCCeEEEEEEcCCCCCCCcceeeeEEEE-
Q 036391 233 FYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAV-KESWTKLISVQEPTPTRSFLFLRPLGYS- 309 (389)
Q Consensus 233 ~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~-~~~W~~~~~i~~~~~~~~~~~~~p~~~~- 309 (389)
-+.++++.... ...+. -.|+||+..-. ..||+++-... ...-..+..+....+.. ...-+++.
T Consensus 173 VR~f~lgsq~E-------gcvvDd~~g~Lyv~eEd----~GIw~~da~p~~~~~~~~v~~~~~g~l~a---DvEGLai~~ 238 (355)
T 3amr_A 173 VRAFKMNSQTE-------GMAADDEYGRLYIAEED----EAIWKFSAEPDGGSNGTVIDRADGRHLTR---DIEGLTIYY 238 (355)
T ss_dssp EEEEECSSCEE-------EEEEETTTTEEEEEETT----TEEEEEECSTTSCSCCEEEEEBSSSSBCS---CEEEEEEEE
T ss_pred EEEecCCCCcc-------eEEEcCCCCeEEEeccc----ceEEEEeCCcCCCCCceEEEEecCCcccc---CcceEEEEe
Confidence 45567765432 12222 35788776533 34999984321 12345565554332221 12234443
Q ss_pred -eCCC-EEEEEE-cCcEEEEEeCC-CCc-EEEEEE
Q 036391 310 -RNGV-KLLLEV-RREKLVWFDLE-TNS-LRTVKI 339 (389)
Q Consensus 310 -~~g~-~i~l~~-~~~~l~~yd~~-~~~-~~~v~~ 339 (389)
.+|. .++... .+..+.+||.+ +.+ ...+.+
T Consensus 239 ~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 239 AADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp CGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred cCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 3444 455444 34579999997 444 345555
No 215
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=39.71 E-value=2e+02 Score=25.38 Aligned_cols=69 Identities=10% Similarity=0.223 Sum_probs=43.7
Q ss_pred CCeEEEEEe-cC------CCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeC
Q 036391 257 EGCLCVFCF-YN------LVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDL 329 (389)
Q Consensus 257 ~G~L~~~~~-~~------~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~ 329 (389)
+++|++... .. ...-.||+.+- .....+.+++... ..-++++++|+.++.... +.+.+||+
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~----~t~~~v~~i~~~~-------p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDT----KTKQRVARIPGRD-------ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEET----TTTEEEEEEECTT-------CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEEC----CCCcEEEEEecCC-------eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 466776554 11 11235666653 2345677777543 345788899997776554 67999999
Q ss_pred CCCcEEEE
Q 036391 330 ETNSLRTV 337 (389)
Q Consensus 330 ~~~~~~~v 337 (389)
++++++.+
T Consensus 333 ~t~~l~~~ 340 (361)
T 2oiz_A 333 SQPEPKLL 340 (361)
T ss_dssp SSSSCEEE
T ss_pred CCCcceee
Confidence 99965655
No 216
>1ddw_A GLGF-domain protein homer; pleckstrin homology domain fold, signaling protein; 1.70A {Rattus norvegicus} SCOP: b.55.1.4 PDB: 1ddv_A 2p8v_A 1i7a_A*
Probab=39.64 E-value=54 Score=24.32 Aligned_cols=40 Identities=10% Similarity=0.213 Sum_probs=28.5
Q ss_pred ceEEEEcCCcc-cccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEE
Q 036391 104 QELALFNPSTR-KLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~ 152 (389)
-.+++.||.|+ .|...-.. ...+.+-+|+..+.|+|+.+.
T Consensus 11 A~V~~~D~~tk~~W~p~g~~---------~~~V~~~~d~~~~~yRIv~~~ 51 (120)
T 1ddw_A 11 AHVFQIDPNTKKNWVPTSKH---------AVTVSYFYDSTRNVYRIISLD 51 (120)
T ss_dssp EEEEEECTTTSCSEEESCSS---------CEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCCceEeCCCC---------ceEEEEEEcCCCCEEEEEEcc
Confidence 46899999996 99643222 135567788888889998754
No 217
>2zvv_Y Cyclin-dependent kinase inhibitor 1; protein-peptide complex, DNA replication, DNA-binding, nucleus, DNA binding protein; 2.00A {Arabidopsis thaliana} PDB: 1axc_B 2zvw_I
Probab=38.85 E-value=9.9 Score=19.15 Aligned_cols=17 Identities=35% Similarity=0.472 Sum_probs=13.8
Q ss_pred ccccchhHHHhhhhccC
Q 036391 373 MKRRNLEEKEKIHKKKR 389 (389)
Q Consensus 373 ~~~~~~~~~~~~~~~~~ 389 (389)
.||+|+.-++=.|.|||
T Consensus 2 rKrkQTs~TDFYhsKRR 18 (26)
T 2zvv_Y 2 RKRRQTSMTDFYHSKRR 18 (26)
T ss_pred CcccccchhHHHhhhce
Confidence 47788888888888886
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=38.11 E-value=1.9e+02 Score=24.65 Aligned_cols=108 Identities=9% Similarity=-0.039 Sum_probs=58.0
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeee-CCCCccccCCCceEEEEEEe----CCeEEEEEecCCCeEEEEEEeeCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQL-PLPDSVNVSYANVHVDVGSL----EGCLCVFCFYNLVYVDMWMMKEHAV 281 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i-~~P~~~~~~~~~~~~~l~~~----~G~L~~~~~~~~~~l~iW~l~~~~~ 281 (389)
+|.+...+.. ...|..+|+.+.+.... ..+... ..+.-. +|...+++.. +..+.+|-+.....
T Consensus 179 ~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~ 246 (357)
T 3i2n_A 179 EERVVCAGYD---NGDIKLFDLRNMALRWETNIKNGV--------CSLEFDRKDISMNKLVATSL-EGKFHVFDMRTQHP 246 (357)
T ss_dssp CCCEEEEEET---TSEEEEEETTTTEEEEEEECSSCE--------EEEEESCSSSSCCEEEEEES-TTEEEEEEEEEEET
T ss_pred CCCEEEEEcc---CCeEEEEECccCceeeecCCCCce--------EEEEcCCCCCCCCEEEEECC-CCeEEEEeCcCCCc
Confidence 5554444332 35789999988765333 111111 123333 5665555543 44899999876332
Q ss_pred CCCeEEEEEEcCCCCCCCcceeeeEEEEeCCC-EEEEEEcCcEEEEEeCCCC
Q 036391 282 KESWTKLISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 282 ~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~~~~~l~~yd~~~~ 332 (389)
....... ..... .....-+.++++|. .++....++.+..||+++.
T Consensus 247 ~~~~~~~-~~~~~-----~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 247 TKGFASV-SEKAH-----KSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp TTEEEEE-EEECC-----SSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred ccceeee-ccCCC-----cCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 2222211 11111 11245567777776 4555566678999998764
No 219
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=37.61 E-value=1.3e+02 Score=29.00 Aligned_cols=64 Identities=13% Similarity=0.209 Sum_probs=40.0
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
+|++.++... +..+.+|.++. ............. ...-++++++|..++....++.+..||..+
T Consensus 459 dg~~lasgs~-D~~v~lwd~~~----~~~~~~~~~~h~~------~v~~v~fspdg~~las~s~d~~v~~w~~~~ 522 (611)
T 1nr0_A 459 DKQFVAVGGQ-DSKVHVYKLSG----ASVSEVKTIVHPA------EITSVAFSNNGAFLVATDQSRKVIPYSVAN 522 (611)
T ss_dssp TSCEEEEEET-TSEEEEEEEET----TEEEEEEEEECSS------CEEEEEECTTSSEEEEEETTSCEEEEEGGG
T ss_pred CCCEEEEeCC-CCeEEEEEccC----CceeeeeccCCCC------ceEEEEECCCCCEEEEEcCCCCEEEEEcCC
Confidence 4554444433 44899998874 2233333322211 255678889998887777777799999876
No 220
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=37.60 E-value=2.3e+02 Score=25.57 Aligned_cols=70 Identities=14% Similarity=0.149 Sum_probs=42.3
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCc----------EEEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRRE----------KLVW 326 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~----------~l~~ 326 (389)
+|...++.......+.||.+.+. ....+..+..+.... ...-++++++ .+++..... .++.
T Consensus 318 ~~~~l~~~~~~d~~i~iw~~~~~-~~~~l~~~~~~~~~~------~v~~~~~~~~--~~~v~~~~~~~~~~~~~~i~v~~ 388 (450)
T 2vdu_B 318 NLPFVAFFVEATKCIIILEMSEK-QKGDLALKQIITFPY------NVISLSAHND--EFQVTLDNKESSGVQKNFAKFIE 388 (450)
T ss_dssp SSSEEEEEETTCSEEEEEEECSS-STTCEEEEEEEECSS------CEEEEEEETT--EEEEEECCTTCCSSCCCSEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEeccC-CCCceeeccEeccCC------ceEEEEecCC--cEEEEEecccCCCCCCcceEEEE
Confidence 57766666645569999999321 124566676666531 2344566653 344443221 6888
Q ss_pred EeCCCCcEE
Q 036391 327 FDLETNSLR 335 (389)
Q Consensus 327 yd~~~~~~~ 335 (389)
++.++++++
T Consensus 389 ~~~~~~~~~ 397 (450)
T 2vdu_B 389 YNLNENSFV 397 (450)
T ss_dssp EETTTTEEE
T ss_pred EEcCCCeEE
Confidence 888888875
No 221
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=37.55 E-value=3.8e+02 Score=28.08 Aligned_cols=195 Identities=14% Similarity=0.156 Sum_probs=95.4
Q ss_pred eecc-eEEEeeCCceEEEEcCCcccccc-cCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 92 SCNG-LIALCNSVQELALFNPSTRKLKT-LPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 92 s~~G-Ll~l~~~~~~~~V~NP~T~~~~~-LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
|.+| ++.....++.+.|||..|++... +... .....++.+.+.. .+ +.... ....+.|+
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h--------~~~v~~~~~s~~~-~~--l~s~~--------~d~~v~vw 684 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGEKLLDIKAH--------EDEVLCCAFSSDD-SY--IATCS--------ADKKVKIW 684 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCC--------SSCEEEEEECTTS-SE--EEEEE--------TTSEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEEEEeccC--------CCCEEEEEEecCC-CE--EEEEe--------CCCeEEEE
Confidence 3345 33333456789999999987543 2211 1224456666543 22 22222 23468899
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeE----CCeEEEEccCCCCCcEEEEEECCCceeee-eCCCCcccc
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA----GGALHWVSPKSSTRSVIMAFNLVAKEFYQ-LPLPDSVNV 244 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~----~G~lywl~~~~~~~~~il~fD~~~e~~~~-i~~P~~~~~ 244 (389)
+..++.-...-... . ..-.++.+ ++.+...++ ....|..+|+.+..... +....
T Consensus 685 d~~~~~~~~~~~~~------------~--~~v~~~~~~~~~~~~~l~sg~---~d~~v~vwd~~~~~~~~~~~~h~---- 743 (1249)
T 3sfz_A 685 DSATGKLVHTYDEH------------S--EQVNCCHFTNKSNHLLLATGS---NDFFLKLWDLNQKECRNTMFGHT---- 743 (1249)
T ss_dssp ETTTCCEEEEEECC------------S--SCEEEEEECSSSSCCEEEEEE---TTSCEEEEETTSSSEEEEECCCS----
T ss_pred ECCCCceEEEEcCC------------C--CcEEEEEEecCCCceEEEEEe---CCCeEEEEECCCcchhheecCCC----
Confidence 99887533211000 0 00011111 222222222 23468888888765433 22111
Q ss_pred CCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC--------CcceeeeEEEEeCCCEE
Q 036391 245 SYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR--------SFLFLRPLGYSRNGVKL 315 (389)
Q Consensus 245 ~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~--------~~~~~~p~~~~~~g~~i 315 (389)
.... .+... +|...+++.. +..+.+|.+.... ....+....... ......-++++++|..+
T Consensus 744 --~~v~-~~~~sp~~~~l~s~s~-dg~v~vwd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l 813 (1249)
T 3sfz_A 744 --NSVN-HCRFSPDDELLASCSA-DGTLRLWDVRSAN------ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKI 813 (1249)
T ss_dssp --SCEE-EEEECSSTTEEEEEES-SSEEEEEEGGGTE------EEEEEECCCCC--------CCCCCBCCCCBCTTSSEE
T ss_pred --CCEE-EEEEecCCCEEEEEEC-CCeEEEEeCCCCc------ccceecccccccccCCccccccceEEEEEECCCCCEE
Confidence 1111 22222 6665555444 4489999887521 122222211100 00123345667788887
Q ss_pred EEEEcCcEEEEEeCCCCcEEEE
Q 036391 316 LLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 316 ~l~~~~~~l~~yd~~~~~~~~v 337 (389)
+... .+.+..||..++.....
T Consensus 814 ~~~~-~~~v~~~d~~~~~~~~~ 834 (1249)
T 3sfz_A 814 IVAA-KNKVLLFDIHTSGLLAE 834 (1249)
T ss_dssp EEEE-TTEEEEEETTTCCEEEE
T ss_pred EEEc-CCcEEEEEecCCCceeE
Confidence 7765 46799999988776543
No 222
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=36.98 E-value=1.9e+02 Score=24.30 Aligned_cols=36 Identities=8% Similarity=0.149 Sum_probs=26.7
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCC-cEEEEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETN-SLRTVK 338 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~-~~~~v~ 338 (389)
..-++++++|..++....++.+.+||+.++ .++.+.
T Consensus 309 v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 309 VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 445677788887777777778999999875 566663
No 223
>1egx_A VAsp, vasodilator-stimulated phosphoprotein; EVH1, VAsp-ENA, poly-proline-binding domain, signaling protein; NMR {Homo sapiens} SCOP: b.55.1.4
Probab=36.34 E-value=62 Score=23.75 Aligned_cols=43 Identities=14% Similarity=0.308 Sum_probs=29.8
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEE
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~ 152 (389)
-.+++++|.|+.|. |.... ....+.+.+..|...+.|.|+...
T Consensus 11 A~V~~~d~~~~~W~--p~~~g----~~gvs~V~~~~d~~~~~yrI~~~~ 53 (115)
T 1egx_A 11 ATVMLYDDGNKRWL--PAGTG----PQAFSRVQIYHNPTANSFRVVGRK 53 (115)
T ss_dssp EECBEECTTTSSCC--BSSCS----CCCCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCcee--ECCCC----CCCccEEEEEEeCCCCEEEEEEEE
Confidence 35788999999985 43321 012345678889888899988765
No 224
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=35.63 E-value=2.1e+02 Score=24.49 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=65.0
Q ss_pred eeECCeEEEEccCCCCCcEEEEEECCCce-eeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCC
Q 036391 204 VLAGGALHWVSPKSSTRSVIMAFNLVAKE-FYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVK 282 (389)
Q Consensus 204 v~~~G~lywl~~~~~~~~~il~fD~~~e~-~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~ 282 (389)
...++.+|-++.. ...+.+||..+.+ -..|+.+... ..|+.-+++|++... . =.|++++-.
T Consensus 102 t~~g~~Ly~ltw~---~~~v~V~D~~Tl~~~~ti~~~~eG--------wGLt~Dg~~L~vSdG--s--~~l~~iDp~--- 163 (268)
T 3nok_A 102 ASDGERLYQLTWT---EGLLFTWSGMPPQRERTTRYSGEG--------WGLCYWNGKLVRSDG--G--TMLTFHEPD--- 163 (268)
T ss_dssp EECSSCEEEEESS---SCEEEEEETTTTEEEEEEECSSCC--------CCEEEETTEEEEECS--S--SEEEEECTT---
T ss_pred EEeCCEEEEEEcc---CCEEEEEECCcCcEEEEEeCCCce--------eEEecCCCEEEEECC--C--CEEEEEcCC---
Confidence 3456788887653 4589999998744 4557765432 135556777777753 2 246677632
Q ss_pred CCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEE-EEEE
Q 036391 283 ESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLR-TVKI 339 (389)
Q Consensus 283 ~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~-~v~~ 339 (389)
.=..+.+|.............-+... +| .|+.... +..+...|+++++.. .|.+
T Consensus 164 -T~~v~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 164 -GFALVGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp -TCCEEEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred -CCeEEEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 22344555542211111111112222 55 6777653 567999999999875 4554
No 225
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=35.27 E-value=3.6e+02 Score=27.12 Aligned_cols=110 Identities=8% Similarity=0.034 Sum_probs=61.7
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE--eCCeEEEEEecCCCeEEEEEEeeCCCCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFCFYNLVYVDMWMMKEHAVKES 284 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~l~iW~l~~~~~~~~ 284 (389)
+|.|||.-. ....|.++|+....-..+-. ... .. ...|++ .+|.||+...... -.|++..-.|. .
T Consensus 482 ~~~LY~tD~---~~~~I~v~~ldG~~~~~l~~-~~l---~~--P~gIaVDp~~g~LYwtD~g~~--~~I~~~~~dG~-~- 548 (791)
T 3m0c_C 482 HSNIYWTDS---VLGTVSVADTKGVKRKTLFR-ENG---SK--PRAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGV-D- 548 (791)
T ss_dssp TTEEEEEET---TTTEEEEEETTSSSEEEEEE-CTT---CC--EEEEEEETTTTEEEEEECSSS--CEEEEEETTSC-C-
T ss_pred CCcEEEEec---CCCeEEEEeCCCCeEEEEEe-CCC---CC--cceEEEecCCCCEEEecCCCC--CeEEEEecCCC-c-
Confidence 479999844 34689999998655444321 111 11 123444 4688888875432 24666654331 1
Q ss_pred eEEEEEEcCCCCCCCcceeee--EEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEEE
Q 036391 285 WTKLISVQEPTPTRSFLFLRP--LGYSRNGVKLLLEVR-REKLVWFDLETNSLRTVK 338 (389)
Q Consensus 285 W~~~~~i~~~~~~~~~~~~~p--~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v~ 338 (389)
...+.... ...| +++...++.||+... ..++..+|+.+...+.+.
T Consensus 549 ---~~~lv~~~------l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 549 ---IYSLVTEN------IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp ---EEEEECSS------CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ---eEEEEeCC------CCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 11111111 1245 455545677887754 357999999887776663
No 226
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=34.89 E-value=2.1e+02 Score=24.31 Aligned_cols=197 Identities=13% Similarity=0.077 Sum_probs=91.9
Q ss_pred ecceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEc
Q 036391 93 CNGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSL 171 (389)
Q Consensus 93 ~~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss 171 (389)
.+|-|.+.+ ....++.+||.++....++... ...++.+++..+ ++.... .. ....+..|+.
T Consensus 41 ~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~---------~p~gia~~~dG~---l~vad~-~~-----~~~~v~~~d~ 102 (306)
T 2p4o_A 41 PDGTIFVTNHEVGEIVSITPDGNQQIHATVEG---------KVSGLAFTSNGD---LVATGW-NA-----DSIPVVSLVK 102 (306)
T ss_dssp TTSCEEEEETTTTEEEEECTTCCEEEEEECSS---------EEEEEEECTTSC---EEEEEE-CT-----TSCEEEEEEC
T ss_pred CCCCEEEEeCCCCeEEEECCCCceEEEEeCCC---------CceeEEEcCCCc---EEEEec-cC-----CcceEEEEcC
Confidence 366665555 4567888998876443332211 244566666532 222221 10 1234566777
Q ss_pred CCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeee------C--CCCccc
Q 036391 172 KINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQL------P--LPDSVN 243 (389)
Q Consensus 172 ~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i------~--~P~~~~ 243 (389)
.+++.+.+...+. ... .....+..+|.+|.... ....|..+|..+...... . .+....
T Consensus 103 ~~g~~~~~~~~~~---------~~~--~~g~~~~~~~~~~v~d~---~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 103 SDGTVETLLTLPD---------AIF--LNGITPLSDTQYLTADS---YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp TTSCEEEEEECTT---------CSC--EEEEEESSSSEEEEEET---TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred CCCeEEEEEeCCC---------ccc--cCcccccCCCcEEEEEC---CCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 7887766544331 000 01111223455665422 235788999876422211 0 111110
Q ss_pred cCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCc
Q 036391 244 VSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RRE 322 (389)
Q Consensus 244 ~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~ 322 (389)
...-.+...++.|++...... .+..+.++..+.-........ .. ...-+++.++|. +++.. ...
T Consensus 169 ----~~pngis~dg~~lyv~d~~~~-~I~~~~~~~~g~~~~~~~~~~--~~-------~P~gi~vd~dG~-l~va~~~~~ 233 (306)
T 2p4o_A 169 ----PAANGLKRFGNFLYVSNTEKM-LLLRIPVDSTDKPGEPEIFVE--QT-------NIDDFAFDVEGN-LYGATHIYN 233 (306)
T ss_dssp ----CSEEEEEEETTEEEEEETTTT-EEEEEEBCTTSCBCCCEEEEE--SC-------CCSSEEEBTTCC-EEEECBTTC
T ss_pred ----CcCCCcCcCCCEEEEEeCCCC-EEEEEEeCCCCCCCccEEEec--cC-------CCCCeEECCCCC-EEEEeCCCC
Confidence 011134333556777665433 444444432111111111111 10 123467777875 45553 355
Q ss_pred EEEEEeCCCCcEEEE
Q 036391 323 KLVWFDLETNSLRTV 337 (389)
Q Consensus 323 ~l~~yd~~~~~~~~v 337 (389)
++..||++ ++...+
T Consensus 234 ~V~~~~~~-G~~~~~ 247 (306)
T 2p4o_A 234 SVVRIAPD-RSTTII 247 (306)
T ss_dssp CEEEECTT-CCEEEE
T ss_pred eEEEECCC-CCEEEE
Confidence 79999997 444433
No 227
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=34.70 E-value=2.4e+02 Score=24.79 Aligned_cols=33 Identities=12% Similarity=0.218 Sum_probs=26.5
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
..-++++++|..|.....++.+.+||+++++..
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~ 304 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDLSMS 304 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCCcEE
Confidence 455788899998888877778999999987643
No 228
>1evh_A WH1 domain, protein (MENA EVH1 domain); molecular recognition, actin dynamics, contractIle protein; 1.80A {Mus musculus} SCOP: b.55.1.4 PDB: 2xqn_M 2iyb_A
Probab=34.46 E-value=68 Score=23.40 Aligned_cols=42 Identities=10% Similarity=0.167 Sum_probs=29.4
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEE
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~ 152 (389)
-.+++.+|.|+.|....... ....+.+..|...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~~~-------g~s~V~~~~d~~~~~yrIv~~~ 52 (112)
T 1evh_A 11 AAVMVYDDANKKWVPAGGST-------GFSRVHIYHHTGNNTFRVVGRK 52 (112)
T ss_dssp EEEEEEETTTTEEEEGGGCC-------SCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEEcCCCCceEECCCCC-------CceEEEEEEECCCCEEEEEEEE
Confidence 46889999999775433111 2345678888888899998764
No 229
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=34.29 E-value=2.7e+02 Score=25.42 Aligned_cols=114 Identities=13% Similarity=0.155 Sum_probs=59.1
Q ss_pred CceeeEC-----CeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE-eCCeEEEEEecCC-CeEEE
Q 036391 201 GYGVLAG-----GALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNL-VYVDM 273 (389)
Q Consensus 201 ~~~v~~~-----G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~-~~l~i 273 (389)
..++.++ |.|||.... ..|..+|+.+.+...+..+.. .. ..++. .+|.|++...... ..-.+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~----~~I~~id~~~g~v~~~~~~~~-----~P--~giavd~dG~lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR----DAFRHVDFVNQYVDIKTTNIG-----QC--ADVNFTLNGDMVVVDDQSSDTNTGI 209 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT----SCEEEEETTTTEEEEECCCCS-----CE--EEEEECTTCCEEEEECCSCTTSEEE
T ss_pred CceEEEccccCCCEEEEEeCC----CCEEEEECCCCEEEEeecCCC-----Cc--cEEEECCCCCEEEEcCCCCcccceE
Confidence 3466666 899997442 689999998887776633211 11 12333 3777777765321 12223
Q ss_pred EEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeCCCCcE
Q 036391 274 WMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNSL 334 (389)
Q Consensus 274 W~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~~~~~~ 334 (389)
..+...+ .|.....+.. + ....-+++.++++.|++.. ...+++.||+++++.
T Consensus 210 ~~~~~~~---~~~~~~~~~~--~----~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 210 YLFTRAS---GFTERLSLCN--A----RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp EEECGGG---TTCCEEEEEE--C----SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred EEEECCC---Ceeccccccc--c----CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 3333221 2221111111 1 0123356666233455543 345788889887766
No 230
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=34.19 E-value=3.3e+02 Score=26.31 Aligned_cols=194 Identities=10% Similarity=0.047 Sum_probs=97.9
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCC-cEEEcccC
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKIN-SWRRISNL 182 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~-~W~~~~~~ 182 (389)
..++++|..+++...+..... .......+.+.|..+ + ++... ... ......+.+++..++ ..+.+...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~spdg~-~-l~~~~-~~~---~~~~~~v~~~d~~~g~~~~~~~~~ 303 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEP-----KEKFLTNLSWSPDEN-I-LYVAE-VNR---AQNECKVNAYDAETGRFVRTLFVE 303 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSC-----TTCEEEEEEECTTSS-E-EEEEE-ECT---TSCEEEEEEEETTTCCEEEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCC-----CceeEeeEEEECCCC-E-EEEEE-eCC---CCCeeEEEEEECCCCceeeEEEEc
Confidence 579999999988766543321 122234455555432 2 22221 111 124567888898888 77655321
Q ss_pred CcccccccccccccccccCceeeE--CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCe
Q 036391 183 PRFLRDFYDYLYHSLFRKGYGVLA--GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGC 259 (389)
Q Consensus 183 p~~~~~~~~~~~~~~~~~~~~v~~--~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~ 259 (389)
... ............- +|.+.+.+.. .....|..+|...+....+..... .....+... +|+
T Consensus 304 ~~~--------~~~~~~~~~~~sp~~dg~~l~~~~~-~g~~~l~~~~~~~~~~~~l~~~~~------~v~~~~~~spdg~ 368 (706)
T 2z3z_A 304 TDK--------HYVEPLHPLTFLPGSNNQFIWQSRR-DGWNHLYLYDTTGRLIRQVTKGEW------EVTNFAGFDPKGT 368 (706)
T ss_dssp ECS--------SCCCCCSCCEECTTCSSEEEEEECT-TSSCEEEEEETTSCEEEECCCSSS------CEEEEEEECTTSS
T ss_pred cCC--------CeECccCCceeecCCCCEEEEEEcc-CCccEEEEEECCCCEEEecCCCCe------EEEeeeEEcCCCC
Confidence 100 0000001111222 7887666543 234578888877766666533211 111112222 554
Q ss_pred -EEEEEecCC-CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----cEEEEEeCCCCc
Q 036391 260 -LCVFCFYNL-VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNS 333 (389)
Q Consensus 260 -L~~~~~~~~-~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----~~l~~yd~~~~~ 333 (389)
|++...... ....||.++-.+ .... .+... ....-+.++++|..+++...+ ..++.+|+++++
T Consensus 369 ~l~~~~~~~~~~~~~l~~~d~~~--~~~~---~l~~~------~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 369 RLYFESTEASPLERHFYCIDIKG--GKTK---DLTPE------SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEEESSSCTTCBEEEEEETTC--CCCE---ESCCS------SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EEEEEecCCCCceEEEEEEEcCC--CCce---eccCC------CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 444443322 246788877422 2221 22211 113456778899888776432 359999999887
Q ss_pred E
Q 036391 334 L 334 (389)
Q Consensus 334 ~ 334 (389)
.
T Consensus 438 ~ 438 (706)
T 2z3z_A 438 H 438 (706)
T ss_dssp E
T ss_pred E
Confidence 3
No 231
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=33.52 E-value=1.9e+02 Score=27.90 Aligned_cols=78 Identities=14% Similarity=0.145 Sum_probs=41.8
Q ss_pred EEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCc
Q 036391 254 GSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 254 ~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~ 333 (389)
+..+|+|++..... . |..++-...+..|.............+....+..++. ++.|++...+..|+++|.+|++
T Consensus 65 ~v~~g~vyv~~~~~--~--v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~--~~~v~~~t~dg~l~AlD~~TG~ 138 (582)
T 1flg_A 65 IVSDGVIYVTASYS--R--LFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY--GDKVFFGTLDASVVALNKNTGK 138 (582)
T ss_dssp EEETTEEEEEETTT--E--EEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE--TTEEEEEETTTEEEEEESSSCC
T ss_pred EEECCEEEEEcCCC--C--EEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE--CCEEEEEeCCCEEEEEECCCCC
Confidence 44677777765432 2 5556532234567553221111100000001223343 5688888777889999999998
Q ss_pred EEEE
Q 036391 334 LRTV 337 (389)
Q Consensus 334 ~~~v 337 (389)
..+-
T Consensus 139 ~~W~ 142 (582)
T 1flg_A 139 VVWK 142 (582)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7654
No 232
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=32.85 E-value=3.5e+02 Score=26.26 Aligned_cols=192 Identities=10% Similarity=0.093 Sum_probs=96.1
Q ss_pred eEEEEcCCc-ccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCC
Q 036391 105 ELALFNPST-RKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLP 183 (389)
Q Consensus 105 ~~~V~NP~T-~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p 183 (389)
.++++|..+ ++...+..... .......+.+ |.. .+-++.... .. .....+.+++..++..+.+....
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-----~~~~~~~~~~-pDg-~~l~~~~~~--~~---~~~~~i~~~d~~~g~~~~~~~~~ 331 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-----QDIYLARVNW-RDP-QHLSFQRQS--RD---QKKLDLVEVTLASNQQRVLAHET 331 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-----SSEEEEEEEE-EET-TEEEEEEEE--TT---SSEEEEEEEETTTCCEEEEEEEE
T ss_pred EEEEEECCCCCceEEecCCCC-----cceEEEEEEe-CCC-CEEEEEEec--cc---CCeEEEEEEECCCCceEEEEEcC
Confidence 788999999 88766653311 1223334555 433 332222211 11 24567888898888776553211
Q ss_pred cccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEE--EEeCCeEE
Q 036391 184 RFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDV--GSLEGCLC 261 (389)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l--~~~~G~L~ 261 (389)
. . ............-+|.+++.+.. .....|..+|..+. ...+.-... .. ..+ ..-+|+..
T Consensus 332 ~--~------~~~~~~~~~~~spdg~~~~~~~~-~g~~~l~~~~~~~~-~~~l~~~~~------~v-~~~~~~s~dg~~l 394 (741)
T 2ecf_A 332 S--P------TWVPLHNSLRFLDDGSILWSSER-TGFQHLYRIDSKGK-AAALTHGNW------SV-DELLAVDEKAGLA 394 (741)
T ss_dssp C--S------SCCCCCSCCEECTTSCEEEEECT-TSSCEEEEECSSSC-EEESCCSSS------CE-EEEEEEETTTTEE
T ss_pred C--C------CcCCcCCceEECCCCeEEEEecC-CCccEEEEEcCCCC-eeeeeecce------EE-EeEeEEeCCCCEE
Confidence 0 0 00000011122347887776553 23357888887665 443322111 11 122 23366544
Q ss_pred EEEecCC--CeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC----cEEEEEeCCCCcEE
Q 036391 262 VFCFYNL--VYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR----EKLVWFDLETNSLR 335 (389)
Q Consensus 262 ~~~~~~~--~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~----~~l~~yd~~~~~~~ 335 (389)
++..... ..+.||.++-.+. . ...+... ....-+.++++|+.+++...+ ..++.+|..++..+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g~-~----~~~l~~~------~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~~~~ 463 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQGG-Q----PQRLSKA------PGMHSASFARNASVYVDSWSNNSTPPQIELFRANGEKIA 463 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTCC-C----CEECCCS------CSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSCEEE
T ss_pred EEEEeCCCCceEEEEEEEcCCC-C----eeecccC------CCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCCeEE
Confidence 4333333 2788999874331 1 1122211 123456778888888776432 35888887665444
Q ss_pred E
Q 036391 336 T 336 (389)
Q Consensus 336 ~ 336 (389)
.
T Consensus 464 ~ 464 (741)
T 2ecf_A 464 T 464 (741)
T ss_dssp C
T ss_pred E
Confidence 3
No 233
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=32.80 E-value=2.7e+02 Score=24.86 Aligned_cols=24 Identities=25% Similarity=0.273 Sum_probs=17.5
Q ss_pred CCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 312 GVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 312 g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
|..++....++.+.+||+++++..
T Consensus 308 g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCceE
Confidence 556666666778999999887643
No 234
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=32.15 E-value=2.4e+02 Score=24.04 Aligned_cols=29 Identities=28% Similarity=0.297 Sum_probs=22.0
Q ss_pred eEEEEeC--CCEEEEEEcCcEEEEEeCCCCc
Q 036391 305 PLGYSRN--GVKLLLEVRREKLVWFDLETNS 333 (389)
Q Consensus 305 p~~~~~~--g~~i~l~~~~~~l~~yd~~~~~ 333 (389)
-+++.++ |..++....++.+.+||+.+++
T Consensus 290 ~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 290 YMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp CCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 3455667 8887777767789999999864
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=32.07 E-value=2.5e+02 Score=24.20 Aligned_cols=199 Identities=9% Similarity=-0.027 Sum_probs=91.4
Q ss_pred cceEEEee-CCceEEEEcCCcccccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcC
Q 036391 94 NGLIALCN-SVQELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLK 172 (389)
Q Consensus 94 ~GLl~l~~-~~~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~ 172 (389)
+|.+.+.+ ....++++||.+++...+..+. ...++.+++.. . ++.. . ...+.+|+..
T Consensus 60 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~---------~v~~i~~~~dg-~--l~v~-~---------~~gl~~~d~~ 117 (326)
T 2ghs_A 60 SGTAWWFNILERELHELHLASGRKTVHALPF---------MGSALAKISDS-K--QLIA-S---------DDGLFLRDTA 117 (326)
T ss_dssp TTEEEEEEGGGTEEEEEETTTTEEEEEECSS---------CEEEEEEEETT-E--EEEE-E---------TTEEEEEETT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEECCC---------cceEEEEeCCC-e--EEEE-E---------CCCEEEEECC
Confidence 35444443 4567899999988766553221 13345566542 2 2221 1 1147788888
Q ss_pred CCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCC---CCCcEEEEEECCCceeeeeCCCCccccCCCce
Q 036391 173 INSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKS---STRSVIMAFNLVAKEFYQLPLPDSVNVSYANV 249 (389)
Q Consensus 173 ~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~---~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 249 (389)
++..+.+...+... .......-.+.-+|.+|+-.... .....|..+| +.+...+. .... .
T Consensus 118 ~g~~~~~~~~~~~~--------~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~--~~~~---~-- 180 (326)
T 2ghs_A 118 TGVLTLHAELESDL--------PGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLF--ADIS---I-- 180 (326)
T ss_dssp TCCEEEEECSSTTC--------TTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEE--EEES---S--
T ss_pred CCcEEEEeeCCCCC--------CCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEee--CCCc---c--
Confidence 88887664322100 00000111122367765432210 1235788888 45555432 1110 0
Q ss_pred EEEEEEe-CCe-EEEEEecCCCeEEEEEEe-eCC-C-CCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcE
Q 036391 250 HVDVGSL-EGC-LCVFCFYNLVYVDMWMMK-EHA-V-KESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREK 323 (389)
Q Consensus 250 ~~~l~~~-~G~-L~~~~~~~~~~l~iW~l~-~~~-~-~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~ 323 (389)
...++.. +|+ |+++... ...+.+|.++ +.+ . ...- ....+... .....-+++..+|. +++.. ....
T Consensus 181 ~~~i~~s~dg~~lyv~~~~-~~~I~~~d~~~~~Gl~~~~~~-~~~~~~~~-----~~~p~gi~~d~~G~-lwva~~~~~~ 252 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTK-VNRLMRVPLDARTGLPTGKAE-VFIDSTGI-----KGGMDGSVCDAEGH-IWNARWGEGA 252 (326)
T ss_dssp EEEEEECTTSCEEEEEETT-TCEEEEEEBCTTTCCBSSCCE-EEEECTTS-----SSEEEEEEECTTSC-EEEEEETTTE
T ss_pred cCCeEEcCCCCEEEEEECC-CCEEEEEEcccccCCcccCce-EEEECCCC-----CCCCCeeEECCCCC-EEEEEeCCCE
Confidence 1123333 564 5554432 2345555443 111 0 0000 11111110 01123345555665 55554 3467
Q ss_pred EEEEeCCCCcEEEEEE
Q 036391 324 LVWFDLETNSLRTVKI 339 (389)
Q Consensus 324 l~~yd~~~~~~~~v~~ 339 (389)
+..||++++..+.+..
T Consensus 253 v~~~d~~g~~~~~i~~ 268 (326)
T 2ghs_A 253 VDRYDTDGNHIARYEV 268 (326)
T ss_dssp EEEECTTCCEEEEEEC
T ss_pred EEEECCCCCEEEEEEC
Confidence 9999997666666654
No 236
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=31.86 E-value=1.1e+02 Score=26.86 Aligned_cols=32 Identities=22% Similarity=0.069 Sum_probs=26.3
Q ss_pred EEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 306 LGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 306 ~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
..++++|+.|++...+..++.+|+.+++.+.+
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVV 117 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceee
Confidence 35778999988887667899999999987765
No 237
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=31.84 E-value=2.7e+02 Score=24.63 Aligned_cols=67 Identities=10% Similarity=0.068 Sum_probs=39.6
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCE-EEEEEcCcEEEEEeCCCCcEE
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVK-LLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~-i~l~~~~~~l~~yd~~~~~~~ 335 (389)
+|++.+.+.. +..+.||-+...+ .......... ...-+++++++.. ++-...++.+..||+++++..
T Consensus 155 d~~~las~s~-D~tv~~Wd~~~~~-----~~~~~~~~~~------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~ 222 (393)
T 4gq1_A 155 AEQVIASVGD-DCTLIIWRLTDEG-----PILAGYPLSS------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSA 222 (393)
T ss_dssp EEEEEEEEET-TSEEEEEEEETTE-----EEEEEEECSS------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC--
T ss_pred CCCEEEEEEC-CCeEEEEECCCCc-----eeeeecCCCC------CcEEEEECCCCCceEEecCCCCEEEEEECCCCccc
Confidence 6676666655 4499999997521 1122222221 2345777877654 444555677999999987653
No 238
>1i2h_A PSD-ZIP45(homer-1C/VESL-1L); enabled VAsp homology 1 domain, signaling protein; 1.80A {Rattus norvegicus} SCOP: b.55.1.4
Probab=31.42 E-value=82 Score=24.91 Aligned_cols=40 Identities=13% Similarity=0.252 Sum_probs=27.9
Q ss_pred ceEEEEcCCcc-cccccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEE
Q 036391 104 QELALFNPSTR-KLKTLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~-~~~~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~ 152 (389)
-.+++.||.|+ .|+..-.. . ..+.+-+|...+.|+|+.+.
T Consensus 16 A~Vm~~D~~tk~~WvP~g~~--------~-~~V~i~~d~~rnsyRIvg~~ 56 (168)
T 1i2h_A 16 AHVFQIDPNTKKNWVPTSKH--------A-VTVSYFYDSTRNVYRIISLD 56 (168)
T ss_dssp EEEEEECTTSSCCSEESCSS--------C-EEEEEEEETTTTEEEEEEEE
T ss_pred EEEEEECCCCCCceeecCCC--------C-eEEEEEEcCCCCEEEEEEcc
Confidence 46899999997 88643222 1 24556688888889998754
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=30.57 E-value=2.4e+02 Score=23.72 Aligned_cols=29 Identities=17% Similarity=0.153 Sum_probs=16.6
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLP 239 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P 239 (389)
+|.+|.-+. ...|.+||...+.......+
T Consensus 147 ~g~l~vgt~----~~~l~~~d~~g~~~~~~~~~ 175 (330)
T 3hxj_A 147 DGTIYVGSN----DNYLYAINPDGTEKWRFKTN 175 (330)
T ss_dssp TSCEEEECT----TSEEEEECTTSCEEEEEECS
T ss_pred CCEEEEEcC----CCEEEEECCCCCEeEEEecC
Confidence 677655322 25899999984333333433
No 240
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=30.35 E-value=2.4e+02 Score=23.61 Aligned_cols=95 Identities=6% Similarity=0.030 Sum_probs=48.7
Q ss_pred cEEEEEECCCceeee-eCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQ-LPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 221 ~~il~fD~~~e~~~~-i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
..|..+|+.+.+... +....... ..........+|.+.+. ...+..+.+|-++.. ..+..+....
T Consensus 214 ~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~s-g~~dg~i~vwd~~~~------~~~~~~~~h~---- 279 (312)
T 4ery_A 214 NTLKLWDYSKGKCLKTYTGHKNEK---YCIFANFSVTGGKWIVS-GSEDNLVYIWNLQTK------EIVQKLQGHT---- 279 (312)
T ss_dssp TEEEEEETTTTEEEEEECSSCCSS---SCCCEEEECSSSCEEEE-CCTTSCEEEEETTTC------CEEEEECCCS----
T ss_pred CeEEEEECCCCcEEEEEEecCCce---EEEEEEEEeCCCcEEEE-ECCCCEEEEEECCCc------hhhhhhhccC----
Confidence 578889998765433 33222111 11111222335554444 444558999988742 1333333221
Q ss_pred cceeeeEEEEeCCCEEEEEE--cCcEEEEEeCC
Q 036391 300 FLFLRPLGYSRNGVKLLLEV--RREKLVWFDLE 330 (389)
Q Consensus 300 ~~~~~p~~~~~~g~~i~l~~--~~~~l~~yd~~ 330 (389)
....-+++++++..++... .++.+..|+.+
T Consensus 280 -~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 280 -DVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp -SCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred -CcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 1244567777877766654 24456666653
No 241
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=29.55 E-value=3.1e+02 Score=24.63 Aligned_cols=178 Identities=15% Similarity=0.051 Sum_probs=90.6
Q ss_pred EEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEEcCCCcEEEcccCCcccccccccccccccccCceeeE---CCeE
Q 036391 134 FYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYSLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLA---GGAL 210 (389)
Q Consensus 134 ~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vyss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~---~G~l 210 (389)
..|+++|...+. |++.. .....++++++....-+.+.... + ....++.+ +|.+
T Consensus 161 p~glavD~~~~~--lY~~d--------~~~~~I~~~~~~g~~~~~l~~~~------------~--~~P~~iavdp~~g~l 216 (400)
T 3p5b_L 161 PDGLAVDWIHSN--IYWTD--------SVLGTVSVADTKGVKRKTLFREN------------G--SKPRAIVVDPVHGFM 216 (400)
T ss_dssp EEEEEEETTTTE--EEEEE--------TTTTEEEEECTTTCSEEEEEECS------------S--CCEEEEEEETTTTEE
T ss_pred cccEEEEecCCc--eEEEE--------CCCCeEEEEeCCCCceEEEEeCC------------C--CCcceEEEecccCeE
Confidence 456777765443 23221 12336778887765544432111 0 11223443 6899
Q ss_pred EEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEE
Q 036391 211 HWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKL 288 (389)
Q Consensus 211 ywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~ 288 (389)
||.... ....|..+|+....-..+-. ... .. ...|+.. +|+||++.... -.||+.+-.+ .......
T Consensus 217 y~td~~--~~~~I~~~~~dG~~~~~~~~-~~l---~~--P~glavd~~~~~lY~aD~~~---~~I~~~d~dG-~~~~~~~ 284 (400)
T 3p5b_L 217 YWTDWG--TPAKIKKGGLNGVDIYSLVT-ENI---QW--PNGITLDLLSGRLYWVDSKL---HSISSIDVNG-GNRKTIL 284 (400)
T ss_dssp EEEECS--SSCCEEEEETTSCSCEEEEC-SSC---SC--EEEEEEETTTTEEEEEETTT---TEEEEEETTS-CCCEEEE
T ss_pred EEEeCC--CCCEEEEEeCCCCccEEEEE-CCC---Cc--eEEEEEEeCCCEEEEEECCC---CEEEEEeCCC-CccEEEE
Confidence 997532 23579999987644333311 111 11 1234444 78888886543 2466666433 2222222
Q ss_pred EEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCc-EEEEEEecCCCC-ceeeEEEEecccc
Q 036391 289 ISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNS-LRTVKIDTHGLD-FVDTEICMASLVP 358 (389)
Q Consensus 289 ~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~-~~~v~~~~~g~~-~~~~~~y~~Sl~~ 358 (389)
.... ....|.++.-+++.||+... ...+..+|..+++ .+.|. .+.. -....+|.+..-|
T Consensus 285 ---~~~~-----~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~---~~~~~p~~i~v~~~~~qp 346 (400)
T 3p5b_L 285 ---EDEK-----RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA---ENLLSPEDMVLFHNLTQP 346 (400)
T ss_dssp ---ECSS-----TTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEE---CSCSCEEEEEEESGGGSC
T ss_pred ---eCCC-----CCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEe---cCCCCCceEEEEeeccCC
Confidence 1111 12356666555667777654 3569999966554 44443 3433 3455566665544
No 242
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=28.80 E-value=3.3e+02 Score=24.74 Aligned_cols=110 Identities=7% Similarity=-0.030 Sum_probs=58.9
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCe-EEEEEecCC--CeEEEEEEeeCCCC
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGC-LCVFCFYNL--VYVDMWMMKEHAVK 282 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~-L~~~~~~~~--~~l~iW~l~~~~~~ 282 (389)
+|.||+.... ..|..||+.+.....+.-+. ... ..++.. +|. |++...... ....+|...+ +
T Consensus 149 ~g~Lyv~d~~----~~I~~id~~~~~v~~~~~~~-----~~P--~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~-g-- 214 (430)
T 3tc9_A 149 HNHLYLVGEQ----HPTRLIDFEKEYVSTVYSGL-----SKV--RTICWTHEADSMIITNDQNNNDRPNNYILTRE-S-- 214 (430)
T ss_dssp EEEEEEEEBT----EEEEEEETTTTEEEEEECCC-----SCE--EEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-G--
T ss_pred CCeEEEEeCC----CcEEEEECCCCEEEEEecCC-----CCc--ceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-C--
Confidence 3889987542 68999999988776653211 111 234433 565 777765332 1333444433 2
Q ss_pred CCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEE-cCcEEEEEeCCCCcEEEE
Q 036391 283 ESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEV-RREKLVWFDLETNSLRTV 337 (389)
Q Consensus 283 ~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~-~~~~l~~yd~~~~~~~~v 337 (389)
.|.....+.. + ....-+++.++++.|++.. ...+++.||++++....+
T Consensus 215 -~~~~~~~l~~--~----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 215 -GFKVITELTK--G----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPL 263 (430)
T ss_dssp -TSCSEEEEEE--C----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -ceeeeeeecc--C----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 2321112221 1 1133456776334455554 456799999988876443
No 243
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=28.64 E-value=3.2e+02 Score=24.46 Aligned_cols=101 Identities=10% Similarity=0.024 Sum_probs=61.7
Q ss_pred cEEEEE--ECCCceeeeeCC---C--CccccCCCceEEEEEEe--CCeEEEEEecCCCeEEEEEEeeCCCC-CCeEEEEE
Q 036391 221 SVIMAF--NLVAKEFYQLPL---P--DSVNVSYANVHVDVGSL--EGCLCVFCFYNLVYVDMWMMKEHAVK-ESWTKLIS 290 (389)
Q Consensus 221 ~~il~f--D~~~e~~~~i~~---P--~~~~~~~~~~~~~l~~~--~G~L~~~~~~~~~~l~iW~l~~~~~~-~~W~~~~~ 290 (389)
..|..| |+.+..+..+.- | ... ...+.+.+-.. .|+++++...+...+..|.|.+.+.. -.=.++.+
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~---~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~ 175 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAI---NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRA 175 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCC---SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEE
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCC---CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEE
Confidence 455555 778888888833 4 222 12233344333 57888887777679999999865321 12245566
Q ss_pred EcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCC
Q 036391 291 VQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLE 330 (389)
Q Consensus 291 i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~ 330 (389)
+.+.. -..-+.+.+..+.||+...+..++.||.+
T Consensus 176 f~lgs------q~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 176 FKMNS------QTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EECSS------CEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ecCCC------CcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 66642 12233444456789998877779999954
No 244
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=27.59 E-value=3.3e+02 Score=24.32 Aligned_cols=66 Identities=12% Similarity=0.073 Sum_probs=38.6
Q ss_pred CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCC-EEEEEEcCcEEEEEeCCC
Q 036391 257 EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGV-KLLLEVRREKLVWFDLET 331 (389)
Q Consensus 257 ~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~-~i~l~~~~~~l~~yd~~~ 331 (389)
++.+++++.. ...+.||-+.... ....+..+.... ....-+++++++. +++....++.+.+||+++
T Consensus 243 ~~~~l~s~~~-dg~i~i~d~~~~~---~~~~~~~~~~~~-----~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 243 HESLFGSVAD-DQKLMIWDTRNNN---TSKPSHTVDAHT-----AEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp CTTEEEEEET-TSEEEEEETTCSC---SSSCSEEEECCS-----SCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred CCCEEEEEeC-CCeEEEEECCCCC---CCcceeEeecCC-----CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 4556555544 4489999887532 111122222111 1245577777776 455566677899999987
No 245
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=26.07 E-value=3.1e+02 Score=23.45 Aligned_cols=164 Identities=10% Similarity=0.070 Sum_probs=79.4
Q ss_pred cceEEEeeC--CceEEEEcCCcccccccCCCCCCCC--CCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEE
Q 036391 94 NGLIALCNS--VQELALFNPSTRKLKTLPLPPCFVG--FPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVY 169 (389)
Q Consensus 94 ~GLl~l~~~--~~~~~V~NP~T~~~~~LP~~~~~~~--~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vy 169 (389)
+|.+.+.+. ...+.++++-.+....+........ ........++.+|+..+..-|. . .....+.+|
T Consensus 154 ~g~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~--d--------~~~~~I~~~ 223 (329)
T 3fvz_A 154 TGAVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA--D--------RENGRIQCF 223 (329)
T ss_dssp TCCEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE--E--------TTTTEEEEE
T ss_pred CCeEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE--E--------CCCCEEEEE
Confidence 777777763 5678888865544444432211000 0112234567778654432222 1 133478899
Q ss_pred EcCCCcEEEcccCCcccccccccccccccccCceeeECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCce
Q 036391 170 SLKINSWRRISNLPRFLRDFYDYLYHSLFRKGYGVLAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANV 249 (389)
Q Consensus 170 ss~~~~W~~~~~~p~~~~~~~~~~~~~~~~~~~~v~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~ 249 (389)
+..++.....-..+..... ...........+..+|.+|.. ......|..+|+.+.+....--+..... ..
T Consensus 224 ~~~~G~~~~~~~~~~~~~~----~~~~~~~pg~~~~~~g~~~v~---~~~~~~v~~~~~~~g~~~~~~~~~~~~~-~~-- 293 (329)
T 3fvz_A 224 KTDTKEFVREIKHASFGRN----VFAISYIPGFLFAVNGKPYFG---DQEPVQGFVMNFSSGEIIDVFKPVRKHF-DM-- 293 (329)
T ss_dssp ETTTCCEEEEECCTTTTTC----EEEEEEETTEEEEEECCCCTT---CSCCCCEEEEETTTCCEEEEECCSSSCC-SS--
T ss_pred ECCCCcEEEEEeccccCCC----cceeeecCCEEEEeCCCEEec---cCCCcEEEEEEcCCCeEEEEEcCCCCcc-CC--
Confidence 9987766433211100000 001111112233345555432 2234578999988776554311111110 11
Q ss_pred EEEEEEe-CCeEEEEEecCCCeEEEEEEee
Q 036391 250 HVDVGSL-EGCLCVFCFYNLVYVDMWMMKE 278 (389)
Q Consensus 250 ~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~ 278 (389)
...++.. +|.|++...... .+.+|.++.
T Consensus 294 p~~ia~~~dG~lyvad~~~~-~I~~~~~~~ 322 (329)
T 3fvz_A 294 PHDIVASEDGTVYIGDAHTN-TVWKFTLTE 322 (329)
T ss_dssp EEEEEECTTSEEEEEESSSC-CEEEEEEEE
T ss_pred eeEEEECCCCCEEEEECCCC-EEEEEeCCc
Confidence 1234444 777877765544 788888775
No 246
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=25.96 E-value=3.3e+02 Score=23.68 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=41.2
Q ss_pred eCCeEEEEEecCCC-----eEEEEEEeeCCCCCCeEEEEE-EcCCCCCCCcceeeeEEEEe---CCCEEEEEEc-CcEEE
Q 036391 256 LEGCLCVFCFYNLV-----YVDMWMMKEHAVKESWTKLIS-VQEPTPTRSFLFLRPLGYSR---NGVKLLLEVR-REKLV 325 (389)
Q Consensus 256 ~~G~L~~~~~~~~~-----~l~iW~l~~~~~~~~W~~~~~-i~~~~~~~~~~~~~p~~~~~---~g~~i~l~~~-~~~l~ 325 (389)
-+|+..++...... .+.+|.++.. ..-..+.. +..... ...-+++++ +|+.++.... ++.+.
T Consensus 264 pdG~~l~v~~~~~~~~~~~~i~v~~~~~~---g~~~~~~~~~~~~~~-----~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 264 FSGKYMFASSRANKFELQGYIAGFKLRDC---GSIEKQLFLSPTPTS-----GGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp TTSSEEEEEEEESSTTSCCEEEEEEECTT---SCEEEEEEEEECSSC-----CTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred CCCCEEEEECCCCCCCCCCeEEEEEECCC---CCEEEeeeeeecCCC-----CcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 37764344333222 7999999742 23333221 322110 123456677 7888877654 36788
Q ss_pred EEeCCCCcEEEE
Q 036391 326 WFDLETNSLRTV 337 (389)
Q Consensus 326 ~yd~~~~~~~~v 337 (389)
+|+.+.+.++.+
T Consensus 336 v~~~~~~~l~~~ 347 (365)
T 1jof_A 336 IYRWKDEFLHRV 347 (365)
T ss_dssp EEEEETTEEEEE
T ss_pred EEEEchhhCcee
Confidence 888877766544
No 247
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=25.83 E-value=5.4e+02 Score=26.14 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=26.6
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
..-++++++|..++....++.+..||+++++...
T Consensus 214 V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 214 VIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 4557788899888877777789999998876543
No 248
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=25.82 E-value=2.9e+02 Score=24.73 Aligned_cols=107 Identities=10% Similarity=0.002 Sum_probs=0.0
Q ss_pred CCeEEEEccCCCCCcEEEEEECCCceeeeeC--------------CCCccccCCCceEEEEEEeCCeEEEEEe-c-C---
Q 036391 207 GGALHWVSPKSSTRSVIMAFNLVAKEFYQLP--------------LPDSVNVSYANVHVDVGSLEGCLCVFCF-Y-N--- 267 (389)
Q Consensus 207 ~G~lywl~~~~~~~~~il~fD~~~e~~~~i~--------------~P~~~~~~~~~~~~~l~~~~G~L~~~~~-~-~--- 267 (389)
+|.+||... ..+..+|+.+..-..+. .|.... ...+..-+++|++... . .
T Consensus 222 ~~~~~~vs~-----~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~------~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 222 PGMLVWAVA-----SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQ------MVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp TTEEEECBS-----SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSS------CEEEETTTTEEEEEEEECSSCTT
T ss_pred CCEEEEEcC-----CEEEEEECCCCcceEEEEEEeccccccccccccCcce------eeEEcCCCCEEEEEeccccCccc
Q ss_pred --CCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc--CcEEEEEeCCCCcEEE
Q 036391 268 --LVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR--REKLVWFDLETNSLRT 336 (389)
Q Consensus 268 --~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~--~~~l~~yd~~~~~~~~ 336 (389)
.....++-++. ...+.+|+... ...-+.+.++|..+++... ++.+.++|+++.+...
T Consensus 291 ~~~~~~~ViD~~t------~~vv~~i~vg~------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 291 AAAENTSSVTASV------GQTSGPISNGH------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp SCEEEEEEEESSS------CCEEECCEEEE------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred ccCCCEEEEECCC------CeEEEEEECCC------CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
No 249
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=25.60 E-value=4e+02 Score=24.63 Aligned_cols=97 Identities=13% Similarity=0.119 Sum_probs=54.5
Q ss_pred cEEEEEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCC
Q 036391 221 SVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRS 299 (389)
Q Consensus 221 ~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~ 299 (389)
..|..+|...+....+...... . ..+... +|++.+.+.. +..+.+|.+.. + .+..+....
T Consensus 407 ~~v~~~~~~~~~~~~~~~~~~~------v-~~~~~s~d~~~l~~~~~-d~~v~~w~~~~----~---~~~~~~~~~---- 467 (577)
T 2ymu_A 407 KTVKLWNRNGQLLQTLTGHSSS------V-WGVAFSPDDQTIASASD-DKTVKLWNRNG----Q---LLQTLTGHS---- 467 (577)
T ss_dssp SEEEEECTTCCEEEEEECCSSC------E-EEEEECTTSSEEEEEET-TSEEEEEETTS----C---EEEEEECCS----
T ss_pred CEEEEEeCCCCEEEEecCCCCC------e-EEEEECCCCCEEEEEcC-CCEEEEEECCC----C---EEEEEcCCC----
Confidence 4577777665544444332211 1 123333 5665544443 44899997532 1 222332211
Q ss_pred cceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 300 FLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 300 ~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
....-++++++|..+.....++.+..||..++..+.+
T Consensus 468 -~~v~~~~~spd~~~las~~~d~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 468 -SSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTL 504 (577)
T ss_dssp -SCEEEEEECTTSCEEEEEETTSEEEEEETTSCEEEEE
T ss_pred -CCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCCEEEEE
Confidence 1245577888888887777777899999876666555
No 250
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=25.41 E-value=3.6e+02 Score=23.92 Aligned_cols=32 Identities=28% Similarity=0.311 Sum_probs=22.0
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
..-+++. ++..++-...++.+.+||+++++..
T Consensus 332 v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 332 LSTISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp GCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred eEEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 3446676 6655555555678999999987743
No 251
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=24.86 E-value=4.9e+02 Score=25.31 Aligned_cols=103 Identities=14% Similarity=0.128 Sum_probs=60.2
Q ss_pred cEEEEEECCCc--eeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCC-CCCCeEEEEEEcCCCCC
Q 036391 221 SVIMAFNLVAK--EFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHA-VKESWTKLISVQEPTPT 297 (389)
Q Consensus 221 ~~il~fD~~~e--~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~-~~~~W~~~~~i~~~~~~ 297 (389)
..|...|+.+. .+..+..+.... .. .+...++.|++..........|++++-.+ ....|..+ ++...
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~-----~~-~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l--~~~~~-- 328 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDAD-----VS-LVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDL--IPERQ-- 328 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSC-----EE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEE--ECCCS--
T ss_pred cEEEEEECCCCCCceEEEeCCCCce-----EE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEE--ecCCC--
Confidence 46777787665 566665443321 11 24556788888776543345666665322 23458753 22211
Q ss_pred CCcceeeeEEEEeCCCEEEEEEc-C--cEEEEEeCCCCcEEEEEE
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVR-R--EKLVWFDLETNSLRTVKI 339 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~-~--~~l~~yd~~~~~~~~v~~ 339 (389)
... .+..+|+.|++... + .++..+|++++..+.+..
T Consensus 329 -----~~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~ 367 (693)
T 3iuj_A 329 -----QVL-TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVAL 367 (693)
T ss_dssp -----SCE-EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECC
T ss_pred -----CEE-EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeec
Confidence 112 66777887777643 2 269999999888777744
No 252
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=24.57 E-value=93 Score=30.87 Aligned_cols=114 Identities=8% Similarity=0.007 Sum_probs=54.8
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCe
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESW 285 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W 285 (389)
.+|.|||... ....|.++|+....-..+- ..... ....+.+-..+|.||+...... -.|+++.-.+...
T Consensus 463 ~~g~LY~tD~---~~~~I~v~d~dg~~~~~l~-~~~~~---~P~giavDp~~g~ly~td~~~~--~~I~~~~~dG~~~-- 531 (699)
T 1n7d_A 463 IHSNIYWTDS---VLGTVSVADTKGVKRKTLF-REQGS---KPRAIVVDPVHGFMYWTDWGTP--AKIKKGGLNGVDI-- 531 (699)
T ss_dssp SSSBCEECCT---TTSCEEEEBSSSCCEEEEC-CCSSC---CCCCEECCSSSSCCEECCCSSS--CCEEBCCSSSCCC--
T ss_pred eCCcEEEEec---cCCeEEEEecCCCceEEEE-eCCCC---CcceEEEccCCCcEEEcccCCC--CeEEEEeCCCCCe--
Confidence 4689999733 3457899998876544431 11111 1111112223677776553221 2344443222111
Q ss_pred EEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 286 TKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 286 ~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
+ .+....+ ....-+++.++++.||+... ..++..+|+.+...+.+
T Consensus 532 -~--~l~~~~l----~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~ 577 (699)
T 1n7d_A 532 -Y--SLVTENI----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI 577 (699)
T ss_dssp -C--EESCSSC----SSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE
T ss_pred -e--EEEeCCC----CCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE
Confidence 0 1111111 11233566655666776643 34688888876555544
No 253
>2jp2_A Spred-2, sprouty-related, EVH1 domain-containing protein 2; solution structure, structural genomics, structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=24.01 E-value=1.3e+02 Score=22.46 Aligned_cols=41 Identities=5% Similarity=-0.114 Sum_probs=25.3
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEe--e---ecCCCCeeEEEEE
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFG--Q---DKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g--~---~~~~~~ykvv~~~ 152 (389)
-.++++||.++.|...... ..+.+.+. . |...+.|+|+...
T Consensus 20 A~Vm~~D~~~~~W~p~~~g--------~ls~v~v~~~~~~~d~~~~~yrI~~~~ 65 (126)
T 2jp2_A 20 AVVMTRDDSSGGWFPQEGG--------GISRVGVCKVMHPEGNGRSGFLIHGER 65 (126)
T ss_dssp EEEEEECTTSSSSEECSCC--------SCEEEEEECCBCTTCSSCBCEEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCC--------CcccEEEEEecCCCCCCCCEEEEEEEE
Confidence 4688899999988644322 12223333 3 4457789888764
No 254
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=23.96 E-value=3.2e+02 Score=22.96 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=23.2
Q ss_pred eECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCc
Q 036391 205 LAGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDS 241 (389)
Q Consensus 205 ~~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~ 241 (389)
--+|.+ |++.. ..|..||+..+....+..|..
T Consensus 247 d~~G~l-wv~~~----~gv~~~~~~g~~~~~~~~~~~ 278 (305)
T 3dr2_A 247 DRGGWL-WSSSG----TGVCVFDSDGQLLGHIPTPGT 278 (305)
T ss_dssp CTTSCE-EECCS----SEEEEECTTSCEEEEEECSSC
T ss_pred CCCCCE-EEecC----CcEEEECCCCCEEEEEECCCc
Confidence 345884 55432 469999999888888888764
No 255
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=23.63 E-value=3.5e+02 Score=23.17 Aligned_cols=30 Identities=23% Similarity=0.308 Sum_probs=23.1
Q ss_pred eeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 303 LRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 303 ~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
..-++++++|..++....++.+..||++++
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEEEcc
Confidence 455778889988887777788888987653
No 256
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=23.18 E-value=3.9e+02 Score=23.59 Aligned_cols=107 Identities=12% Similarity=0.117 Sum_probs=53.5
Q ss_pred CcEEEEEECCC--ceeeeeCCCC-ccccCCCceEEEEEEe-CC-eEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCC
Q 036391 220 RSVIMAFNLVA--KEFYQLPLPD-SVNVSYANVHVDVGSL-EG-CLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEP 294 (389)
Q Consensus 220 ~~~il~fD~~~--e~~~~i~~P~-~~~~~~~~~~~~l~~~-~G-~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~ 294 (389)
...|..+|+.+ ..+..+...+ .... +...-..+.-. +| .+.+.+.. +..+.||-+........- ...+...
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~--~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEE-LTEVITAAEFHPNSCNTFVYSSS-KGTIRLCDMRASALCDRH--SKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGG-CCCCEEEEEECSSCTTEEEEEET-TSCEEEEETTTCSSSCTT--CEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccc-cCcceEEEEECCCCCcEEEEEeC-CCeEEEEECcCCccccce--eeEeccC
Confidence 46788899883 2344343322 2211 11111123333 45 55555544 448999988753210000 1112211
Q ss_pred CCCC-------CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCC
Q 036391 295 TPTR-------SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLET 331 (389)
Q Consensus 295 ~~~~-------~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~ 331 (389)
.-.. ......-++++++|..++.... +.+.+||+++
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM 315 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC
Confidence 1000 0012455777888888777666 7899999986
No 257
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=22.58 E-value=3.8e+02 Score=23.19 Aligned_cols=102 Identities=12% Similarity=0.123 Sum_probs=54.3
Q ss_pred cEEEEEECCCceee-eeCCCCccccCCCceEEEEEE-eCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIMAFNLVAKEFY-QLPLPDSVNVSYANVHVDVGS-LEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~-~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..|..+|..+.... .+..|.... . .+.- -+|.+.+... .+..+.+|.+........-.....+....
T Consensus 86 g~v~vWd~~~~~~~~~~~~~~~~v------~-~~~~sp~g~~lasg~-~d~~i~v~~~~~~~~~~~~~~~~~~~~h~--- 154 (354)
T 2pbi_B 86 GKVIVWDSFTTNKEHAVTMPCTWV------M-ACAYAPSGCAIACGG-LDNKCSVYPLTFDKNENMAAKKKSVAMHT--- 154 (354)
T ss_dssp SEEEEEETTTCCEEEEEECSSSCC------C-EEEECTTSSEEEEES-TTSEEEEEECCCCTTCCSGGGCEEEEECS---
T ss_pred CeEEEEECCCCCcceEEecCCCCE------E-EEEECCCCCEEEEee-CCCCEEEEEEeccccccccccceeeeccC---
Confidence 45777776654432 244443221 1 1222 2555544443 34589999886432111111111222111
Q ss_pred CcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
....-+.+.+++..++....++.+..||+++++..
T Consensus 155 --~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~ 189 (354)
T 2pbi_B 155 --NYLSACSFTNSDMQILTASGDGTCALWDVESGQLL 189 (354)
T ss_dssp --SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE
T ss_pred --CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE
Confidence 12445667777777777777788999999988754
No 258
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=22.54 E-value=3.3e+02 Score=22.44 Aligned_cols=96 Identities=11% Similarity=0.140 Sum_probs=54.2
Q ss_pred CcEEEEEECCCceee-eeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCC
Q 036391 220 RSVIMAFNLVAKEFY-QLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPT 297 (389)
Q Consensus 220 ~~~il~fD~~~e~~~-~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~ 297 (389)
...|..+|+.+.+.. .+..... . -..+.-. +|. ++....+..+.+|.++.. .....+....
T Consensus 204 dg~i~i~d~~~~~~~~~~~~~~~------~-i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~------~~~~~~~~~~-- 266 (313)
T 3odt_A 204 DGLIKLVDMHTGDVLRTYEGHES------F-VYCIKLLPNGD--IVSCGEDRTVRIWSKENG------SLKQVITLPA-- 266 (313)
T ss_dssp TSEEEEEETTTCCEEEEEECCSS------C-EEEEEECTTSC--EEEEETTSEEEEECTTTC------CEEEEEECSS--
T ss_pred CCeEEEEECCchhhhhhhhcCCc------e-EEEEEEecCCC--EEEEecCCEEEEEECCCC------ceeEEEeccC--
Confidence 357899999865432 2332211 1 1133333 554 333344558999987642 1233333321
Q ss_pred CCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEE
Q 036391 298 RSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRT 336 (389)
Q Consensus 298 ~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~ 336 (389)
....-+++.++|. ++....++.+..||++++++..
T Consensus 267 ---~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 267 ---ISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp ---SCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC
T ss_pred ---ceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceee
Confidence 1244567777876 4456667789999999887643
No 259
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=22.17 E-value=3.6e+02 Score=24.44 Aligned_cols=68 Identities=10% Similarity=0.169 Sum_probs=39.7
Q ss_pred CeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEE
Q 036391 258 GCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETNSLRTV 337 (389)
Q Consensus 258 G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v 337 (389)
+.+.+.+.. +..+.||-+... ......... .....-++++++|..++....++.+..||++.+....+
T Consensus 162 ~~~las~s~-Dg~v~iwD~~~~------~~~~~~~~~-----~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 162 PSMVAVCLA-DGSIAVLQVTET------VKVCATLPS-----TVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp TTEEEEEET-TSCEEEEEESSS------EEEEEEECG-----GGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEE
T ss_pred CCEEEEEEC-CCeEEEEEcCCC------cceeeccCC-----CCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccc
Confidence 444444333 347889988751 122111110 11245567778898888887777899999984444333
No 260
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=21.82 E-value=6.7e+02 Score=25.79 Aligned_cols=98 Identities=9% Similarity=0.069 Sum_probs=54.4
Q ss_pred cEEE-EEECCCceeeeeCCCCccccCCCceEEEEEEe-CCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCC
Q 036391 221 SVIM-AFNLVAKEFYQLPLPDSVNVSYANVHVDVGSL-EGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTR 298 (389)
Q Consensus 221 ~~il-~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~~-~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~ 298 (389)
..+. .+|+.+.....+. +... . ...+.-. +|+..++.... ..+.+|-++. ..-..+ +....
T Consensus 358 ~~l~~~~d~~~~~~~~l~-~~~~-----~-~~~~~~SpDG~~la~~~~~-~~v~~~d~~t----g~~~~~--~~~~~--- 420 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE-ENLG-----N-VFAMGVDRNGKFAVVANDR-FEIMTVDLET----GKPTVI--ERSRE--- 420 (1045)
T ss_dssp EEEEEEEETTTCCEEECC-CCCC-----S-EEEEEECTTSSEEEEEETT-SEEEEEETTT----CCEEEE--EECSS---
T ss_pred CceEEEEECCCCCceEec-CCcc-----c-eeeeEECCCCCEEEEECCC-CeEEEEECCC----CceEEe--ccCCC---
Confidence 4677 8898887666554 2211 1 1123333 67665554443 3677777653 122222 21111
Q ss_pred CcceeeeEEEEeCCCEEEEEEcC----------cEEEEEeCCCCcEEEE
Q 036391 299 SFLFLRPLGYSRNGVKLLLEVRR----------EKLVWFDLETNSLRTV 337 (389)
Q Consensus 299 ~~~~~~p~~~~~~g~~i~l~~~~----------~~l~~yd~~~~~~~~v 337 (389)
....-+++++||..++..... ..++.||+++++...+
T Consensus 421 --~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l 467 (1045)
T 1k32_A 421 --AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAA 467 (1045)
T ss_dssp --SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEEC
T ss_pred --CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEe
Confidence 113456778899877765432 3699999999875544
No 261
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.92 E-value=84 Score=20.95 Aligned_cols=23 Identities=9% Similarity=0.072 Sum_probs=17.3
Q ss_pred CEEEEEEcCcEEEEEeCCCCcEE
Q 036391 313 VKLLLEVRREKLVWFDLETNSLR 335 (389)
Q Consensus 313 ~~i~l~~~~~~l~~yd~~~~~~~ 335 (389)
.-....+.++++++||..|++-.
T Consensus 21 ~W~~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 21 PWCVVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp SCEEEEESSSCEEEEETTTTEEC
T ss_pred CcEEEECCCCCEEEecCccccee
Confidence 34555567788999999998754
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=20.73 E-value=4.1e+02 Score=22.91 Aligned_cols=112 Identities=12% Similarity=0.021 Sum_probs=60.0
Q ss_pred ECCeEEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceEEEEEE--eCCeEEEEEecCCCeEEEEEEeeCCCCC
Q 036391 206 AGGALHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVHVDVGS--LEGCLCVFCFYNLVYVDMWMMKEHAVKE 283 (389)
Q Consensus 206 ~~G~lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~~~l~~--~~G~L~~~~~~~~~~l~iW~l~~~~~~~ 283 (389)
.+|.+||... ....|..+|+....-..+.- ... ... ..++. .+|.|++..... .-.|++++-.|. .
T Consensus 89 ~~g~ly~~d~---~~~~I~~~~~dG~~~~~l~~-~~~---~~P--~giavdp~~g~ly~td~~~--~~~I~r~~~dG~-~ 156 (318)
T 3sov_A 89 LGEKLYWTDS---ETNRIEVSNLDGSLRKVLFW-QEL---DQP--RAIALDPSSGFMYWTDWGE--VPKIERAGMDGS-S 156 (318)
T ss_dssp TTTEEEEEET---TTTEEEEEETTSCSCEEEEC-SSC---SSE--EEEEEEGGGTEEEEEECSS--SCEEEEEETTSC-S
T ss_pred CCCeEEEEEC---CCCEEEEEECCCCcEEEEEe-CCC---CCc--cEEEEeCCCCEEEEEecCC--CCEEEEEEcCCC-C
Confidence 4789999843 34689999987654333321 111 111 23444 368888776432 234666654331 1
Q ss_pred CeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEc-CcEEEEEeCCCCcEEEE
Q 036391 284 SWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVR-REKLVWFDLETNSLRTV 337 (389)
Q Consensus 284 ~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~-~~~l~~yd~~~~~~~~v 337 (389)
. .. .+. ..+ ....-+++.++++.||+... ..++..+|++....+.+
T Consensus 157 ~--~~-~~~-~~l----~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 203 (318)
T 3sov_A 157 R--FI-IIN-SEI----YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 203 (318)
T ss_dssp C--EE-EEC-SSC----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred e--EE-EEE-CCC----CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEE
Confidence 1 11 111 111 12334566666677777654 35688888876655544
No 263
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=20.68 E-value=6.7e+02 Score=25.40 Aligned_cols=72 Identities=11% Similarity=0.185 Sum_probs=46.7
Q ss_pred EEEeCCeEEEEEecCCCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcCcEEEEEeCCCC
Q 036391 253 VGSLEGCLCVFCFYNLVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRREKLVWFDLETN 332 (389)
Q Consensus 253 l~~~~G~L~~~~~~~~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~~~l~~yd~~~~ 332 (389)
+.-..|+ +++....+..+.||-++.. . .+..+.... ...-++++++|+.++....++.+..||++++
T Consensus 64 l~fspg~-~L~S~s~D~~v~lWd~~~~----~--~~~~~~~~~------~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~ 130 (902)
T 2oaj_A 64 MRFVKGI-YLVVINAKDTVYVLSLYSQ----K--VLTTVFVPG------KITSIDTDASLDWMLIGLQNGSMIVYDIDRD 130 (902)
T ss_dssp EEEETTT-EEEEEETTCEEEEEETTTC----S--EEEEEECSS------CEEEEECCTTCSEEEEEETTSCEEEEETTTT
T ss_pred EEEcCCC-EEEEEECcCeEEEEECCCC----c--EEEEEcCCC------CEEEEEECCCCCEEEEEcCCCcEEEEECCCC
Confidence 3333477 4444445569999988741 1 233333211 2455777789999888888888999999998
Q ss_pred cEEEE
Q 036391 333 SLRTV 337 (389)
Q Consensus 333 ~~~~v 337 (389)
+....
T Consensus 131 ~~~~~ 135 (902)
T 2oaj_A 131 QLSSF 135 (902)
T ss_dssp EEEEE
T ss_pred ccccc
Confidence 86533
No 264
>1xod_A Spred1; sprouty, EVH1, peptide-binding, signaling protein; 1.15A {Xenopus tropicalis} SCOP: b.55.1.4 PDB: 1tj6_A
Probab=20.19 E-value=1.1e+02 Score=22.45 Aligned_cols=41 Identities=7% Similarity=-0.056 Sum_probs=22.0
Q ss_pred ceEEEEcCCcccccccCCCCCCCCCCCceeEEEEee-----ecCCCCeeEEEEE
Q 036391 104 QELALFNPSTRKLKTLPLPPCFVGFPSAFIFYGFGQ-----DKSNDDYKLVRVL 152 (389)
Q Consensus 104 ~~~~V~NP~T~~~~~LP~~~~~~~~~~~~~~~~~g~-----~~~~~~ykvv~~~ 152 (389)
-.++.+||.|+.|....... .+.+.+.+ |...+.|+|+...
T Consensus 11 A~V~~~d~~~~~W~p~~~g~--------ls~v~i~~~~~~~d~~~~~yrIv~~~ 56 (118)
T 1xod_A 11 AVVMTRDDSSGGWLQLGGGG--------LSSVTVSKTLQPGDSGGTEFLVHGER 56 (118)
T ss_dssp EEEEEECSSSSCEEEGGGCC--------CEEEEEECC---------CCEEEEEE
T ss_pred EEEeeEcCCCCCEeeCCCCC--------cccEEEEEecCcCCCCCCEEEEEEEE
Confidence 36888999999886443221 12223333 4456789888754
No 265
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=20.15 E-value=5.9e+02 Score=24.53 Aligned_cols=202 Identities=6% Similarity=-0.101 Sum_probs=93.0
Q ss_pred eEEEEcCCccccc---ccCCCCCCCCCCCceeEEEEeeecCCCCeeEEEEEEEeCCCCCCceeEEEEEE----cCCCcEE
Q 036391 105 ELALFNPSTRKLK---TLPLPPCFVGFPSAFIFYGFGQDKSNDDYKLVRVLHFKGNDGEDVEVEVEVYS----LKINSWR 177 (389)
Q Consensus 105 ~~~V~NP~T~~~~---~LP~~~~~~~~~~~~~~~~~g~~~~~~~ykvv~~~~~~~~~~~~~~~~~~Vys----s~~~~W~ 177 (389)
.++++|..+++.. .+..+.. -.........+.+.|. + +++..... .. .....+.+++ ..++.++
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~SpD-~--~~~~~~~~-~~---~~~~~l~~~d~~~~~~~g~~~ 295 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAM--IASSDYYFSWLTWVTD-E--RVCLQWLK-RV---QNVSVLSICDFREDWQTWDCP 295 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHH--HHTSCEEEEEEEESSS-S--EEEEEEEE-SS---TTEEEEEEEEECSSSSSEECC
T ss_pred EEEEEECCCCCccceeEccCCcc--CCCCcceEEEeEEeCC-C--eEEEEEec-cc---cCeEEEEEEcccCCCCCCceE
Confidence 6889999998753 4443221 0011223344566665 2 33333221 11 1345677788 6666655
Q ss_pred Eccc----CCccccccccccccccc--ccCceeeECCe-EEEEccCCCCCcEEEEEECCCceeeeeCCCCccccCCCceE
Q 036391 178 RISN----LPRFLRDFYDYLYHSLF--RKGYGVLAGGA-LHWVSPKSSTRSVIMAFNLVAKEFYQLPLPDSVNVSYANVH 250 (389)
Q Consensus 178 ~~~~----~p~~~~~~~~~~~~~~~--~~~~~v~~~G~-lywl~~~~~~~~~il~fD~~~e~~~~i~~P~~~~~~~~~~~ 250 (389)
.+.. ... ..... .......-+|. +++..........|..+|+.+.....+.-... +-..
T Consensus 296 ~~~~~~~~~~~---------~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~lt~~~~-----~v~~ 361 (719)
T 1z68_A 296 KTQEHIEESRT---------GWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQITSGKW-----EAIN 361 (719)
T ss_dssp GGGEEEEECSS---------SCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEECSCSSS-----CEEE
T ss_pred EEEecccccCC---------ceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEecccCce-----EEEE
Confidence 4321 010 00000 00112223565 34433322334578889988776554432111 1111
Q ss_pred EEEEEeCCeEEEEEecC----CCeEEEEEEeeCCCCCCeEEEEEEcCCCCCCCcceeeeEEEEeCCCEEEEEEcC---cE
Q 036391 251 VDVGSLEGCLCVFCFYN----LVYVDMWMMKEHAVKESWTKLISVQEPTPTRSFLFLRPLGYSRNGVKLLLEVRR---EK 323 (389)
Q Consensus 251 ~~l~~~~G~L~~~~~~~----~~~l~iW~l~~~~~~~~W~~~~~i~~~~~~~~~~~~~p~~~~~~g~~i~l~~~~---~~ 323 (389)
.... +|+..++.... .....+|.++-.+..... ..+.. .+.+.........++++|+.+++...+ ..
T Consensus 362 ~~~~--d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~---~~l~~-~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~ 435 (719)
T 1z68_A 362 IFRV--TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSK---KCVTC-HLRKERCQYYTASFSDYAKYYALVCYGPGIPI 435 (719)
T ss_dssp EEEE--CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCE---EESST-TTTTTTBCBEEEEECGGGSSEEEEECCBSSCE
T ss_pred EEEE--eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCc---eeccC-ccCCCCCceEEEEECCCCCEEEEEcCCCCCCe
Confidence 2222 55544444333 347889998853211111 11211 011011123345667777777765332 25
Q ss_pred EEEEeCCCCcEE
Q 036391 324 LVWFDLETNSLR 335 (389)
Q Consensus 324 l~~yd~~~~~~~ 335 (389)
+..||+++++..
T Consensus 436 ~~l~d~~~g~~~ 447 (719)
T 1z68_A 436 STLHDGRTDQEI 447 (719)
T ss_dssp EEEECSSSCCEE
T ss_pred EEEEECCCCCEE
Confidence 778888877643
No 266
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=20.07 E-value=2.2e+02 Score=24.79 Aligned_cols=33 Identities=18% Similarity=0.040 Sum_probs=26.0
Q ss_pred EEEEeCCCEEEEEEcCcEEEEEeCCCCcEEEEE
Q 036391 306 LGYSRNGVKLLLEVRREKLVWFDLETNSLRTVK 338 (389)
Q Consensus 306 ~~~~~~g~~i~l~~~~~~l~~yd~~~~~~~~v~ 338 (389)
..++++|..|++......++.+|+.+++.+.+.
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~ 118 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIY 118 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEE
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEE
Confidence 355778988888776668999999998877663
Done!