Query 036400
Match_columns 198
No_of_seqs 209 out of 1514
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 21:11:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036400.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036400hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hb9_A Similarities with proba 99.9 8E-25 2.7E-29 186.5 12.7 139 9-163 261-401 (412)
2 3rp8_A Flavoprotein monooxygen 99.9 8.2E-23 2.8E-27 175.5 11.8 141 7-166 249-389 (407)
3 2vou_A 2,6-dihydroxypyridine h 99.9 4E-21 1.4E-25 164.7 12.2 114 14-148 257-370 (397)
4 2x3n_A Probable FAD-dependent 99.8 7.6E-21 2.6E-25 162.7 10.0 134 17-166 243-377 (399)
5 2xdo_A TETX2 protein; tetracyc 99.8 2E-20 6.7E-25 160.5 10.0 124 10-153 264-392 (398)
6 3c4a_A Probable tryptophan hyd 99.8 1.3E-20 4.5E-25 160.8 5.2 131 11-164 219-353 (381)
7 1k0i_A P-hydroxybenzoate hydro 99.8 1.3E-19 4.5E-24 154.6 7.0 112 59-181 274-387 (394)
8 3c96_A Flavin-containing monoo 99.8 3.4E-19 1.2E-23 153.3 9.5 105 16-140 259-366 (410)
9 2qa2_A CABE, polyketide oxygen 99.7 4.8E-18 1.6E-22 150.4 10.4 95 58-164 272-366 (499)
10 3fmw_A Oxygenase; mithramycin, 99.7 4.3E-18 1.5E-22 153.0 7.5 97 58-165 316-412 (570)
11 2qa1_A PGAE, polyketide oxygen 99.7 1E-17 3.5E-22 148.3 9.6 94 58-163 271-364 (500)
12 3alj_A 2-methyl-3-hydroxypyrid 99.7 6.9E-19 2.4E-23 149.8 -0.0 104 19-140 238-344 (379)
13 1pn0_A Phenol 2-monooxygenase; 99.7 1.1E-17 3.9E-22 152.7 5.9 82 58-149 344-426 (665)
14 2r0c_A REBC; flavin adenine di 99.7 2.2E-17 7.5E-22 147.6 7.0 97 58-165 303-408 (549)
15 3ihm_A Styrene monooxygenase A 99.7 9.4E-17 3.2E-21 139.3 10.5 115 10-143 250-375 (430)
16 3ihg_A RDME; flavoenzyme, anth 99.7 3.5E-17 1.2E-21 145.4 6.3 82 58-149 295-376 (535)
17 2dkh_A 3-hydroxybenzoate hydro 99.7 5.7E-17 2E-21 147.4 6.1 77 63-149 341-417 (639)
18 3e1t_A Halogenase; flavoprotei 99.5 1E-13 3.6E-18 122.6 13.8 112 26-146 257-369 (512)
19 3atr_A Conserved archaeal prot 99.5 1.3E-14 4.5E-19 126.4 5.6 81 59-148 277-357 (453)
20 3oz2_A Digeranylgeranylglycero 99.5 1.8E-13 6.1E-18 115.3 10.1 78 60-146 273-350 (397)
21 3cgv_A Geranylgeranyl reductas 99.4 4.4E-13 1.5E-17 113.6 8.7 81 59-148 272-352 (397)
22 2pyx_A Tryptophan halogenase; 99.4 8.2E-13 2.8E-17 117.2 9.0 122 11-158 305-427 (526)
23 2gmh_A Electron transfer flavo 99.4 3.7E-13 1.3E-17 121.1 5.7 82 59-148 342-427 (584)
24 3i3l_A Alkylhalidase CMLS; fla 99.4 3.3E-12 1.1E-16 115.2 11.8 126 18-158 267-395 (591)
25 2aqj_A Tryptophan halogenase, 99.3 2E-12 6.9E-17 115.0 6.5 68 59-139 325-392 (538)
26 2weu_A Tryptophan 5-halogenase 99.3 3.7E-12 1.3E-16 112.3 6.4 86 59-158 333-419 (511)
27 2e4g_A Tryptophan halogenase; 99.2 6.1E-12 2.1E-16 112.3 6.2 86 59-158 356-442 (550)
28 3nix_A Flavoprotein/dehydrogen 99.2 6.1E-11 2.1E-15 101.4 8.4 92 26-133 254-346 (421)
29 2bry_A NEDD9 interacting prote 98.7 3.5E-09 1.2E-13 93.4 1.8 64 57-135 386-451 (497)
30 3kkj_A Amine oxidase, flavin-c 97.0 0.0004 1.4E-08 53.2 3.5 36 62-103 293-328 (336)
31 1yvv_A Amine oxidase, flavin-c 95.6 0.0087 3E-07 48.7 3.8 35 63-103 294-328 (336)
32 4g6h_A Rotenone-insensitive NA 35.4 72 0.0025 27.4 6.2 37 62-101 363-399 (502)
33 3i6d_A Protoporphyrinogen oxid 34.3 38 0.0013 28.0 4.1 32 63-100 435-466 (470)
34 3f8d_A Thioredoxin reductase ( 32.3 63 0.0021 24.9 4.9 40 62-103 278-317 (323)
35 3lxy_A 4-hydroxythreonine-4-ph 32.0 32 0.0011 28.4 3.2 36 63-103 204-239 (334)
36 3nks_A Protoporphyrinogen oxid 28.7 48 0.0016 27.6 3.9 32 63-100 441-472 (477)
37 3itj_A Thioredoxin reductase 1 28.5 61 0.0021 25.2 4.3 36 63-102 299-334 (338)
38 3r9u_A Thioredoxin reductase; 27.3 76 0.0026 24.3 4.6 36 63-102 276-311 (315)
39 4dgk_A Phytoene dehydrogenase; 25.8 48 0.0016 27.9 3.3 34 64-102 458-491 (501)
40 2ywl_A Thioredoxin reductase r 25.6 1E+02 0.0036 21.6 4.8 37 62-102 134-170 (180)
41 2gqw_A Ferredoxin reductase; f 24.4 41 0.0014 27.8 2.5 38 63-100 265-307 (408)
42 3d1c_A Flavin-containing putat 24.1 84 0.0029 24.9 4.4 37 63-100 300-336 (369)
43 3fbs_A Oxidoreductase; structu 23.5 85 0.0029 23.8 4.2 37 62-103 256-292 (297)
44 3h28_A Sulfide-quinone reducta 23.2 1.1E+02 0.0039 25.2 5.1 43 62-104 285-334 (430)
45 3h8l_A NADH oxidase; membrane 22.9 90 0.0031 25.5 4.4 37 63-102 299-335 (409)
46 1yxo_A 4-hydroxythreonine-4-ph 22.8 42 0.0014 27.6 2.3 37 62-103 198-234 (328)
47 2hi1_A 4-hydroxythreonine-4-ph 21.8 44 0.0015 27.5 2.2 37 62-103 204-240 (330)
48 3lzw_A Ferredoxin--NADP reduct 21.4 86 0.0029 24.3 3.8 39 63-103 277-315 (332)
49 3kd9_A Coenzyme A disulfide re 21.2 72 0.0024 26.6 3.5 38 63-100 272-314 (449)
50 3nrn_A Uncharacterized protein 20.8 79 0.0027 25.9 3.6 32 64-98 372-403 (421)
51 1sez_A Protoporphyrinogen oxid 20.8 96 0.0033 26.0 4.3 34 63-102 460-493 (504)
52 3vrd_B FCCB subunit, flavocyto 20.7 1.3E+02 0.0043 24.4 4.9 38 63-103 286-324 (401)
53 2cul_A Glucose-inhibited divis 20.2 1E+02 0.0035 23.0 3.9 33 62-100 197-229 (232)
No 1
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.92 E-value=8e-25 Score=186.45 Aligned_cols=139 Identities=22% Similarity=0.185 Sum_probs=108.6
Q ss_pred CCChHHHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHH
Q 036400 9 AGNPELIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQAL 88 (198)
Q Consensus 9 ~~~~~~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~Ai 88 (198)
..+++..++.+.+.|. +|+|.++.+++.++...+..+.++..++. .+|..|||+|||||||+|+|+.|||+|+||
T Consensus 261 ~~~~~~~~~~~~~~~~-~~~p~~~~li~~~~~~~~~~~~~~~~~~~----~~~~~grv~LiGDAAH~~~P~~GqG~n~ai 335 (412)
T 4hb9_A 261 DFSAEALCDLVQSRMI-SWDPSLHTLVQQSDMENISPLHLRSMPHL----LPWKSSTVTLLGDAIHNMTPMTGSGANTAL 335 (412)
T ss_dssp GCCHHHHHHHHHHHTT-TSCHHHHHHHHTSCTTCCEEEEEEECCCC----CCCCCCSEEECTHHHHCSSCCSSSHHHHHH
T ss_pred ccchHHHHHHHHHHhc-cCChHHHHHHHhcccceeccchhcccccc----ccccccCEEEEEcccccCCCchhhHHHHHH
Confidence 3467788899999999 99999999999988666666666665554 379999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhh--hhcCCCChHHHHHHHHHHH
Q 036400 89 EDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGW--VQDGGSNWWMRFLRDVIFY 163 (198)
Q Consensus 89 eDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~--~~~~~~~~~~~~~r~~~~~ 163 (198)
+||++|+++|.....+ .. ++..+|+.||++|++|++.+++.|++.+. +.+.+ .+.. ..|+..++
T Consensus 336 ~DA~~La~~L~~~~~~-------~~--~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~~~~~~~~-~~~~-~~r~~~~~ 401 (412)
T 4hb9_A 336 RDALLLTQKLASVASG-------HE--ELVKAISDYEQQMRAYANEIVGISLRSAQNAVIHFS-IPPL-KQRHLSIR 401 (412)
T ss_dssp HHHHHHHHHHHHHHTT-------SS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-C------------
T ss_pred HHHHHHHHHHHHHhcC-------Cc--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchH-HHHHHHHh
Confidence 9999999999987654 23 68899999999999999999999987764 34444 4333 23554443
No 2
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.88 E-value=8.2e-23 Score=175.48 Aligned_cols=141 Identities=27% Similarity=0.366 Sum_probs=120.2
Q ss_pred CCCCChHHHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhh
Q 036400 7 NKAGNPELIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQ 86 (198)
Q Consensus 7 ~~~~~~~~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~ 86 (198)
....++++.++.+.+.|. +|.+.+.++++.++...+..+.++...+. ++|+.|||+|||||||.|+|+.|||+|+
T Consensus 249 ~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~rv~LvGDAAh~~~P~~GqG~~~ 323 (407)
T 3rp8_A 249 GLAEDRDTLRADLSRYFA-GWAPPVQKLIAALDPQTTNRIEIHDIEPF----SRLVRGRVALLGDAGHSTTPDIGQGGCA 323 (407)
T ss_dssp TCSCCTTTHHHHHHHHTT-TCCHHHHHHHHHSCGGGCEEEEEEECCCC----SCCEETTEEECGGGTCCCCGGGSCHHHH
T ss_pred CCCCCchhHHHHHHHHhc-CCChHHHHHHHcCCccceeEEeeEecCCC----CceecCCEEEEEcccccCCcchhhhHHH
Confidence 344567788899999999 99999999999887544433555554443 4799999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCChHHHHHHHHHHHHhh
Q 036400 87 ALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQDGGSNWWMRFLRDVIFYRFL 166 (198)
Q Consensus 87 AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~~ 166 (198)
||+||..|+++|... . ....+|+.|+++|++++..+++.++.+.++++.. ++.....|+..++...
T Consensus 324 al~da~~La~~L~~~-----------~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R~~~l~~~~ 389 (407)
T 3rp8_A 324 AMEDAVVLGAVFRQT-----------R--DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAWYQELREET 389 (407)
T ss_dssp HHHHHHHHHHHHHSC-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHhcC-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHHHHHHhhcc
Confidence 999999999999851 2 5788999999999999999999999999999999 9999999999887543
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.85 E-value=4e-21 Score=164.70 Aligned_cols=114 Identities=13% Similarity=0.142 Sum_probs=94.0
Q ss_pred HHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHH
Q 036400 14 LIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVV 93 (198)
Q Consensus 14 ~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~ 93 (198)
+..+++.+.+...|++ +.++++.++ ....++++.... ++|+.|||+|||||||+|+|++|||+|+||+||..
T Consensus 257 ~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~-----~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~ 328 (397)
T 2vou_A 257 HNLRQFHSKGESLFKP-FRDLVLNAS--SPFVTVVADATV-----DRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDART 328 (397)
T ss_dssp HHHHHHHHHHTTSCHH-HHHHHHHCS--SCEEEEEEEBCC-----SCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhChH-HHHHHhccC--CcceeeeeeecC-----CceecCcEEEEeccccccCCcchhhHHHHHHHHHH
Confidence 4445566666437888 888888765 334567765532 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 036400 94 LGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQDG 148 (198)
Q Consensus 94 La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~~~ 148 (198)
|+++|.. .. ++..+|+.||++|++++..+++.|+.++++++.
T Consensus 329 La~~L~~-----------~~--~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 329 LAEVFTK-----------NH--DLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp HHHHHHH-----------CS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHhc-----------CC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999975 12 578999999999999999999999999888875
No 4
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.83 E-value=7.6e-21 Score=162.68 Aligned_cols=134 Identities=18% Similarity=0.121 Sum_probs=102.9
Q ss_pred HHHHHHHhccCCHHHH-HHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHH
Q 036400 17 KEVLEKYAKVLPPFYS-VIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLG 95 (198)
Q Consensus 17 ~~l~~~~~~~~~~~~~-~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La 95 (198)
+.+.+.+. .|.+.+. ..++.++.+.+..+++..+.+ .++|..|||+|||||||.|+|+.|||+|+||+||..|+
T Consensus 243 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La 317 (399)
T 2x3n_A 243 ESLRRRLQ-RFVGDESAEAIAAVTGTSRFKGIPIGYLN----LDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALA 317 (399)
T ss_dssp HHHHHHHH-TTCCGGGHHHHHTCCCSTTCEECCCCCEE----CSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHH
T ss_pred HHHHHHHh-hcCCcchhhHHhcCCccceEEechhhccc----ccccccCcEEEEechhccCCCcccccHHHHHHHHHHHH
Confidence 45666777 7888773 444555433455667654222 24799999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCChHHHHHHHHHHHHhh
Q 036400 96 RHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQDGGSNWWMRFLRDVIFYRFL 166 (198)
Q Consensus 96 ~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~~~~~~~~~~~~r~~~~~~~~ 166 (198)
++|...... .. ++..+|+.|+++|++++..++..+..+.++++.. +++...+ +.+++.+.
T Consensus 318 ~~L~~~~~~-------~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~-~~~~~~~~ 377 (399)
T 2x3n_A 318 DALDLALRD-------AC--ALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF-DTALQGSS 377 (399)
T ss_dssp HHHHHHHTT-------SS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH-HC------
T ss_pred HHHHhhhcc-------cc--hHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH-HHHHhhhc
Confidence 999886532 12 5789999999999999999999999999999888 7788888 88777544
No 5
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.82 E-value=2e-20 Score=160.46 Aligned_cols=124 Identities=17% Similarity=0.131 Sum_probs=100.3
Q ss_pred CChHHHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccC-C--CEEEecCCCCcCCCCchhhHhh
Q 036400 10 GNPELIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSK-G--NVTVAGDAMHPMTPDLGQGGCQ 86 (198)
Q Consensus 10 ~~~~~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~-g--rVvLiGDAAH~m~P~~GqGan~ 86 (198)
.++++.++.+.+.|. +|.+.+.++++... .+..++++..+.. .+|.. + ||+|||||||+|+|+.|||+|+
T Consensus 264 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~~rv~LiGDAAh~~~P~~GqG~n~ 336 (398)
T 2xdo_A 264 QNRNSVVDFLLKEFS-DWDERYKELIHTTL--SFVGLATRIFPLE----KPWKSKRPLPITMIGDAAHLMPPFAGQGVNS 336 (398)
T ss_dssp TCHHHHHHHHHHHTT-TSCHHHHHHHHHCS--CCEEEEEEECCCC----SCCCSCCSSCEEECTHHHHCCCCTTSCSHHH
T ss_pred CCHHHHHHHHHHHHc-CCChHHHHHHhCcc--cceeeeeEeccCC----CCcccCCCccEEEEeehhccCCCccCccHHH
Confidence 467788899999998 89999999998732 4555666554432 36765 5 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCchh-HHHHHHHHHHHHHHHHHHHHHHHHHhhh-hhcCCCChH
Q 036400 87 ALEDAVVLGRHIGNLLIKTKGHIATTGDNN-VAQAIDGYVKERKWRVTGLVIGSYLSGW-VQDGGSNWW 153 (198)
Q Consensus 87 AieDa~~La~~L~~~~~~~~~~~~~~~~~~-~~~al~~Ye~~R~~r~~~~~~~s~~~~~-~~~~~~~~~ 153 (198)
||+||..|+++|... .. + +..+|+.|+++|++++..++..|..+.. ++..+ +++
T Consensus 337 ai~Da~~La~~L~~~----------~~--~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~-~~~ 392 (398)
T 2xdo_A 337 GLVDALILSDNLADG----------KF--NSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKPD-FTF 392 (398)
T ss_dssp HHHHHHHHHHHHHSC----------CS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTT-CCC
T ss_pred HHHHHHHHHHHHHhc----------cC--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-ccc
Confidence 999999999999763 12 4 7889999999999999999999987764 55554 443
No 6
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.81 E-value=1.3e-20 Score=160.77 Aligned_cols=131 Identities=14% Similarity=0.007 Sum_probs=96.4
Q ss_pred ChHHHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHH
Q 036400 11 NPELIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALED 90 (198)
Q Consensus 11 ~~~~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieD 90 (198)
++++.++.+.+.|. +|.+.+ ++++. .. ..|+++...+. ++|+.|||+|||||||+|+|+.|||+|+||+|
T Consensus 219 ~~~~~~~~l~~~~~-~~~~~~-~l~~~---~~-~~~~~~~~~~~----~~~~~grv~LvGDAAh~~~P~~GqG~~~al~D 288 (381)
T 3c4a_A 219 SEEASAEYVAKVFQ-AELGGH-GLVSQ---PG-LGWRNFMTLSH----DRCHDGKLVLLGDALQSGHFSIGHGTTMAVVV 288 (381)
T ss_dssp CHHHHHHHHHHHTH-HHHTTC-CCBCC---TT-TCSEEEEECCC----SCSEETTEEECGGGTCCCCGGGCCHHHHHHHH
T ss_pred ChHHHHHHHHHHhc-ccCCCc-hhhcC---CC-cceeeeccccC----CCcccCCEEEEEccccccCCCccccHHHHHHH
Confidence 66678888888888 664432 22221 11 24555544443 47999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCC----CChHHHHHHHHHHHH
Q 036400 91 AVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQDGG----SNWWMRFLRDVIFYR 164 (198)
Q Consensus 91 a~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~~~~----~~~~~~~~r~~~~~~ 164 (198)
|..|+++|... . ++..+|+.|+++|++++..++..++.+.+++... ..++....|+..++.
T Consensus 289 a~~La~~L~~~-----------~--~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 353 (381)
T 3c4a_A 289 AQLLVKALCTE-----------D--GVPAALKRFEERALPLVQLFRGHADNSRVWFETVEERMHLSSAEFVQSFDARR 353 (381)
T ss_dssp HHHHHHHHHHS-----------S--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCC------CHHHHGGGTT
T ss_pred HHHHHHHHhcc-----------c--cHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhchhhhhcCCHHHHHHHHhhcc
Confidence 99999999762 2 5789999999999999999999999888555431 012445567766653
No 7
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.78 E-value=1.3e-19 Score=154.59 Aligned_cols=112 Identities=16% Similarity=0.097 Sum_probs=92.5
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|..|||+|||||||.|+|+.|||+|+||+||..|+++|...... ....+|+.|+++|++++..+++.
T Consensus 274 ~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~-----------~~~~~L~~Y~~~r~~~~~~~~~~ 342 (394)
T 1k0i_A 274 EPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYRE-----------GRGELLERYSAICLRRIWKAERF 342 (394)
T ss_dssp ECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHH-----------CCGGGGGGHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhcc-----------CchHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999876532 23468999999999999999999
Q ss_pred HHHhhhhhcCC--CChHHHHHHHHHHHHhhhhhhccCccccccCC
Q 036400 139 SYLSGWVQDGG--SNWWMRFLRDVIFYRFLVGGVLGNKVTGYDCG 181 (198)
Q Consensus 139 s~~~~~~~~~~--~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 181 (198)
+..+..+++.. .+++.+.+|+..+..+...+.++..+.....|
T Consensus 343 s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~g 387 (394)
T 1k0i_A 343 SWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENYVG 387 (394)
T ss_dssp HHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHSC
T ss_pred HHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHhcC
Confidence 99888877632 15788889999988776666666555555555
No 8
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.78 E-value=3.4e-19 Score=153.29 Aligned_cols=105 Identities=24% Similarity=0.354 Sum_probs=87.2
Q ss_pred HHHHHHHHhccCCH---HHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHH
Q 036400 16 QKEVLEKYAKVLPP---FYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAV 92 (198)
Q Consensus 16 k~~l~~~~~~~~~~---~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~ 92 (198)
.+++.+.|. +|.+ .+..+++.++ .+..+++..+.+. ++|..|||+|||||||.|+|+.|||+|+||+||.
T Consensus 259 ~~~l~~~~~-~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~----~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~ 331 (410)
T 3c96_A 259 LEDVLPFFA-DWDLGWFDIRDLLTRNQ--LILQYPMVDRDPL----PHWGRGRITLLGDAAHLMYPMGANGASQAILDGI 331 (410)
T ss_dssp HHHHHHHHT-TCCBTTBCHHHHHHTCS--EEEEEEEEECCCC----SCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHH
T ss_pred HHHHHHHhc-CCCCchhHHHHHHhcCc--ccceeecccCCCc----cccccCCEEEEecccCCCCCccchhHHHHHHHHH
Confidence 456677777 7754 3677887764 5666777665554 3799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036400 93 VLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSY 140 (198)
Q Consensus 93 ~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~ 140 (198)
.|++.|... . +...+|..|+++|++++..++..++
T Consensus 332 ~La~~L~~~-----------~--~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 332 ELAAALARN-----------A--DVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp HHHHHHHHC-----------S--SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcc-----------C--CHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999762 2 5788999999999999999998887
No 9
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.74 E-value=4.8e-18 Score=150.37 Aligned_cols=95 Identities=27% Similarity=0.309 Sum_probs=81.3
Q ss_pred ccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 137 (198)
Q Consensus 58 ~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~ 137 (198)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|++.|.....+ . ..+.+|..|+++|+++++.++.
T Consensus 272 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g--------~--~~~~~L~~Ye~eR~~~~~~~~~ 341 (499)
T 2qa2_A 272 VSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSG--------R--APAGLLDTYHEERHPVGRRLLM 341 (499)
T ss_dssp CSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCTHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcC--------C--CChHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999887643 2 3467899999999999999999
Q ss_pred HHHHhhhhhcCCCChHHHHHHHHHHHH
Q 036400 138 GSYLSGWVQDGGSNWWMRFLRDVIFYR 164 (198)
Q Consensus 138 ~s~~~~~~~~~~~~~~~~~~r~~~~~~ 164 (198)
.+....+++.. ++....+|+.++..
T Consensus 342 ~s~~~~~l~~~--~~~~~~~R~~~~~~ 366 (499)
T 2qa2_A 342 NTQAQGMLFLS--GDEMQPLRDVLSEL 366 (499)
T ss_dssp HHHHHHHHHHC--CGGGHHHHHHHHHH
T ss_pred HHHHHHHHhcC--CchHHHHHHHHHHh
Confidence 99988888874 45666777766543
No 10
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.72 E-value=4.3e-18 Score=153.03 Aligned_cols=97 Identities=24% Similarity=0.208 Sum_probs=86.0
Q ss_pred ccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 137 (198)
Q Consensus 58 ~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~ 137 (198)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|++.|.....+ . ....+|..|+++|++++..++.
T Consensus 316 a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g--------~--~~~~lL~~Ye~eR~~~~~~~~~ 385 (570)
T 3fmw_A 316 AKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRG--------W--GSEELLDTYHDERHPVAERVLL 385 (570)
T ss_dssp CSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHS--------C--CCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999887643 2 4578999999999999999999
Q ss_pred HHHHhhhhhcCCCChHHHHHHHHHHHHh
Q 036400 138 GSYLSGWVQDGGSNWWMRFLRDVIFYRF 165 (198)
Q Consensus 138 ~s~~~~~~~~~~~~~~~~~~r~~~~~~~ 165 (198)
.+..+.++++.. +.+...+|+.++..+
T Consensus 386 ~s~~~~~l~~~~-~~~~~~lR~~~~~l~ 412 (570)
T 3fmw_A 386 NTRAQLALMRPD-EQHTTPLRGFVEELL 412 (570)
T ss_dssp HHHHHHHHSCSC-TTTHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCC-chHHHHHHHHHHHHh
Confidence 999999999887 655888999888754
No 11
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.72 E-value=1e-17 Score=148.29 Aligned_cols=94 Identities=28% Similarity=0.359 Sum_probs=81.0
Q ss_pred ccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 137 (198)
Q Consensus 58 ~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~ 137 (198)
.++|..|||+|+|||||.|+|++|||+|+||+||.+|++.|.....+ . ..+.+|..|+++|+++++.++.
T Consensus 271 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g--------~--~~~~~L~~Y~~eR~~~~~~~~~ 340 (500)
T 2qa1_A 271 VTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNG--------T--ATEELLDSYHSERHAVGKRLLM 340 (500)
T ss_dssp CSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcC--------C--CChHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999999999999999999999999999999887643 2 4578999999999999999999
Q ss_pred HHHHhhhhhcCCCChHHHHHHHHHHH
Q 036400 138 GSYLSGWVQDGGSNWWMRFLRDVIFY 163 (198)
Q Consensus 138 ~s~~~~~~~~~~~~~~~~~~r~~~~~ 163 (198)
.+....+++.. ++....+|+.++.
T Consensus 341 ~s~~~~~l~~~--~~~~~~~R~~~~~ 364 (500)
T 2qa1_A 341 NTQAQGLLFLS--GPEVQPLRDVLTE 364 (500)
T ss_dssp HHHHHHHHHHS--CGGGHHHHHHHHH
T ss_pred HHHHHHHHhcC--CchHHHHHHHHHH
Confidence 99988888874 4566677776554
No 12
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.71 E-value=6.9e-19 Score=149.78 Aligned_cols=104 Identities=18% Similarity=0.162 Sum_probs=80.6
Q ss_pred HHHHHhccCCHHHH---HHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHH
Q 036400 19 VLEKYAKVLPPFYS---VIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLG 95 (198)
Q Consensus 19 l~~~~~~~~~~~~~---~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La 95 (198)
+.+.|. +|.+.+. ++++.+++..+..++++...+. ++|..|||+|||||||.|+|+.|||+|+||+||..|+
T Consensus 238 l~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~----~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La 312 (379)
T 3alj_A 238 VPIDLE-VWVEMFPFLEPCLIEAAKLKTARYDKYETTKL----DSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLS 312 (379)
T ss_dssp SSCCHH-HHHHHCGGGHHHHHHHHTCTTCCEEEEEEEEE----SCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHh-cCCchhccHHHHHhhCCccceEEecccccCCC----CCcccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHH
Confidence 334444 4544444 6676554345556676653322 4789999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 036400 96 RHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSY 140 (198)
Q Consensus 96 ~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~ 140 (198)
+.|... . ++..+|+.|+++|++++..++..+.
T Consensus 313 ~~L~~~-----------~--~~~~~l~~Y~~~r~~~~~~~~~~s~ 344 (379)
T 3alj_A 313 QDLEEG-----------S--SVEDALVAWETRIRPITDRCQALSG 344 (379)
T ss_dssp HHTTSS-----------S--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccc-----------c--CHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999751 2 5688999999999999999999884
No 13
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.69 E-value=1.1e-17 Score=152.72 Aligned_cols=82 Identities=26% Similarity=0.300 Sum_probs=73.1
Q ss_pred ccCcc-CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLS-KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLV 136 (198)
Q Consensus 58 ~~~w~-~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~ 136 (198)
.++|. .|||+|+|||||.|+|++|||+|+||+||++|++.|.....+ . ..+.+|..|+++|+++++.++
T Consensus 344 a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~g--------~--a~~~lL~tYe~eR~p~a~~~i 413 (665)
T 1pn0_A 344 TEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLTG--------R--AKRDILKTYEEERQPFAQALI 413 (665)
T ss_dssp CSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHTT--------C--BCGGGGHHHHHHHHHHHHHHH
T ss_pred hhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHH
Confidence 35788 799999999999999999999999999999999999987643 1 345789999999999999999
Q ss_pred HHHHHhhhhhcCC
Q 036400 137 IGSYLSGWVQDGG 149 (198)
Q Consensus 137 ~~s~~~~~~~~~~ 149 (198)
..++...+++...
T Consensus 414 ~~s~~~~~l~~~~ 426 (665)
T 1pn0_A 414 DFDHQFSRLFSGR 426 (665)
T ss_dssp HHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCC
Confidence 9999998888654
No 14
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.69 E-value=2.2e-17 Score=147.60 Aligned_cols=97 Identities=19% Similarity=0.162 Sum_probs=74.0
Q ss_pred ccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 137 (198)
Q Consensus 58 ~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~ 137 (198)
.++|..|||+|+|||||.|+|+.|||+|+||+||.+|++.|.....+ . ..+.+|..|+++|+++++.+++
T Consensus 303 a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g--------~--a~~~lL~~Y~~eR~~~a~~~~~ 372 (549)
T 2r0c_A 303 ADSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRG--------W--AGPGLLATYEEERRPVAITSLE 372 (549)
T ss_dssp CSCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHT--------C--SCTTTTHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcC--------C--CCHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999887653 1 3457899999999999999999
Q ss_pred HHHHhhhhhcC---------CCChHHHHHHHHHHHHh
Q 036400 138 GSYLSGWVQDG---------GSNWWMRFLRDVIFYRF 165 (198)
Q Consensus 138 ~s~~~~~~~~~---------~~~~~~~~~r~~~~~~~ 165 (198)
.|..+.+++.. . ++.....|+.+...+
T Consensus 373 ~s~~~~~~~~~~~~~~~~~~~-~~~~~~~R~~~~~~~ 408 (549)
T 2r0c_A 373 EANVNLRRTMDRELPPGLHDD-GPRGERIRAAVAEKL 408 (549)
T ss_dssp C----------CCCCTTTTCC-SHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcccccccccccc-CcchHHHHHHHHHHH
Confidence 99988887754 2 455667777766644
No 15
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.69 E-value=9.4e-17 Score=139.34 Aligned_cols=115 Identities=21% Similarity=0.238 Sum_probs=90.1
Q ss_pred CChHHHHHHHHHHHhccCCHHHHHHHHhCC------CCCc---ccccccccCCccccccCccCCCEEE-ecCCCCcCCCC
Q 036400 10 GNPELIQKEVLEKYAKVLPPFYSVIVRRSD------ASTL---HWAPLMFRHPWNVFFGNLSKGNVTV-AGDAMHPMTPD 79 (198)
Q Consensus 10 ~~~~~~k~~l~~~~~~~~~~~~~~li~~~~------~~~~---~~~~l~~~~~~~~~~~~w~~grVvL-iGDAAH~m~P~ 79 (198)
.++++.++.+++.|. +|.|.+..+++..+ +..+ ..+++. +.+. .+|..||++| ||||||+|+|+
T Consensus 250 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~----~~~~~~~~~ll~GDAah~~~p~ 323 (430)
T 3ihm_A 250 DDPRAFLDLMLEKLG-KHHPSVAERIDPAEFDLANSSLDILQGGVVPAF-RDGH----ATLNNGKTIIGLGDIQATVDPV 323 (430)
T ss_dssp TCHHHHHHHHHHHHH-HHCHHHHTTBCTTTCEESSSTTSEEEECCCCEE-BCSE----EECTTSCEEEECGGGTEECCGG
T ss_pred CCHHHHHHHHHHHHH-HhCccHHHHHhhchhccccCccceeecceeecc-cccc----cccCCCCEEEEecCccccCCCc
Confidence 478889999999999 89999888877655 2222 223332 2232 4799999999 99999999999
Q ss_pred chhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Q 036400 80 LGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERK-WRVTGLVIGSYLSG 143 (198)
Q Consensus 80 ~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~-~r~~~~~~~s~~~~ 143 (198)
.|||+|+||+||..|+++|... . ++.++|..|+.+|+ .++..+.+.+..+.
T Consensus 324 ~g~G~~~a~~da~~l~~~l~~~-----------~--~~~~~~~~~~~~r~~~~~~~~~~~~~~~~ 375 (430)
T 3ihm_A 324 LGQGANMASYAAWILGEEILAH-----------S--VYDLRFSEHLERRRQDRVLCATRWTNFTL 375 (430)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHC-----------S--CCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHhc-----------C--CHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999873 2 46789999999988 77777766665543
No 16
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.67 E-value=3.5e-17 Score=145.42 Aligned_cols=82 Identities=24% Similarity=0.218 Sum_probs=71.7
Q ss_pred ccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 036400 58 FGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVI 137 (198)
Q Consensus 58 ~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~ 137 (198)
.++|..|||+|+|||||.|+|+.|||+|+||+||.+|++.|.....+ . ....+|..|+++|+++++.+++
T Consensus 295 a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g--------~--~~~~lL~~Ye~eR~p~a~~~~~ 364 (535)
T 3ihg_A 295 AERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQG--------Q--AGAGLLDTYEDERKVAAELVVA 364 (535)
T ss_dssp ESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTT--------S--SCTTHHHHHHHHHHHHHHHHHH
T ss_pred ECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcC--------C--CcHHHHHhhHHHHHHHHHHHHH
Confidence 35799999999999999999999999999999999999999987643 1 3457899999999999999999
Q ss_pred HHHHhhhhhcCC
Q 036400 138 GSYLSGWVQDGG 149 (198)
Q Consensus 138 ~s~~~~~~~~~~ 149 (198)
.|....+.+..+
T Consensus 365 ~s~~~~~~~~~~ 376 (535)
T 3ihg_A 365 EALAIYAQRMAP 376 (535)
T ss_dssp HHHHHHHHHTCG
T ss_pred HHHHhhHhhccc
Confidence 998877665443
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.66 E-value=5.7e-17 Score=147.38 Aligned_cols=77 Identities=25% Similarity=0.274 Sum_probs=66.2
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLS 142 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~ 142 (198)
.|||+|+|||||.|+|++|||+|+||+||.+|++.|+....+ . ..+.+|..|+++|+++++.++..++..
T Consensus 341 ~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g--------~--a~~~lL~~Ye~eR~~~a~~~~~~s~~~ 410 (639)
T 2dkh_A 341 LPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK--------Q--CAPELLHTYSSERQVVAQQLIDFDREW 410 (639)
T ss_dssp CCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT--------S--BCGGGGHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC--------C--CcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999987643 2 345789999999999999999999998
Q ss_pred hhhhcCC
Q 036400 143 GWVQDGG 149 (198)
Q Consensus 143 ~~~~~~~ 149 (198)
.++++..
T Consensus 411 ~~~~~~~ 417 (639)
T 2dkh_A 411 AKMFSDP 417 (639)
T ss_dssp CC-----
T ss_pred HHHhcCC
Confidence 8888764
No 18
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.53 E-value=1e-13 Score=122.62 Aligned_cols=112 Identities=13% Similarity=0.094 Sum_probs=81.4
Q ss_pred cCCHHHHHHHHhCCCC-CcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHh
Q 036400 26 VLPPFYSVIVRRSDAS-TLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIK 104 (198)
Q Consensus 26 ~~~~~~~~li~~~~~~-~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~ 104 (198)
.+.|.+..++...... ......+.....+.....+|..+||+|||||||.|+|+.|||+|+||+||..|+++|......
T Consensus 257 ~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~ 336 (512)
T 3e1t_A 257 DRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAG 336 (512)
T ss_dssp HTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcC
Confidence 4778888888765311 111111211111111234688899999999999999999999999999999999999886543
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 036400 105 TKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQ 146 (198)
Q Consensus 105 ~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~ 146 (198)
.. +...+|+.|++.|+++...+.+.......+.
T Consensus 337 -------~~--~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~ 369 (512)
T 3e1t_A 337 -------EM--SEQRCFEEFERRYRREYGNFYQFLVAFYDMN 369 (512)
T ss_dssp -------CS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred -------Cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 12 6788999999999999999988876555544
No 19
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.50 E-value=1.3e-14 Score=126.37 Aligned_cols=81 Identities=11% Similarity=-0.019 Sum_probs=69.9
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|+.+||+|||||||.|+|+.|||+|+||+||..||++|....... + ...++|..|++.|+++....+..
T Consensus 277 ~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~-------~--~~~~~L~~Y~~~r~~~~~~~~~~ 347 (453)
T 3atr_A 277 YTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETG-------D--FSASGLWDMNICYVNEYGAKQAS 347 (453)
T ss_dssp SCSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHT-------C--CSTTTTTHHHHHHHHHTHHHHHH
T ss_pred CceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcC-------C--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999998765421 1 12568999999999999999999
Q ss_pred HHHhhhhhcC
Q 036400 139 SYLSGWVQDG 148 (198)
Q Consensus 139 s~~~~~~~~~ 148 (198)
+....+++..
T Consensus 348 ~~~~~~~~~~ 357 (453)
T 3atr_A 348 LDIFRRFLQK 357 (453)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHH
Confidence 8888877653
No 20
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.47 E-value=1.8e-13 Score=115.26 Aligned_cols=78 Identities=15% Similarity=0.161 Sum_probs=63.8
Q ss_pred CccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 036400 60 NLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGS 139 (198)
Q Consensus 60 ~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s 139 (198)
+|+.+||+|+|||||.++|+.|||+|+||+||..||+.|..+... .+ ..+++|+.|++.++++..+....+
T Consensus 273 ~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~-------~~--~~~~~L~~Ye~~~~~~~~~~~~~~ 343 (397)
T 3oz2_A 273 PITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES-------ND--YSPQMMQKYEKLIKERFERKHLRN 343 (397)
T ss_dssp CCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-------TC--CSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHc-------CC--ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 578899999999999999999999999999999999999987764 12 346889999999888776655555
Q ss_pred HHhhhhh
Q 036400 140 YLSGWVQ 146 (198)
Q Consensus 140 ~~~~~~~ 146 (198)
......+
T Consensus 344 ~~~~~~~ 350 (397)
T 3oz2_A 344 WVAKEKL 350 (397)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444433
No 21
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=4.4e-13 Score=113.57 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=70.6
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|..+||+|||||||.++|+.|||+|+|++||..|++.|...... .. ....+|..|++.|+++....+..
T Consensus 272 ~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~-------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 342 (397)
T 3cgv_A 272 MPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIES-------ND--YSPQMMQKYEKLIKERFERKHLR 342 (397)
T ss_dssp SCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHH-------TC--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHc-------CC--ccHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999999999999999999999999999999887643 12 34678999999999999999999
Q ss_pred HHHhhhhhcC
Q 036400 139 SYLSGWVQDG 148 (198)
Q Consensus 139 s~~~~~~~~~ 148 (198)
+....+++..
T Consensus 343 ~~~~~~~~~~ 352 (397)
T 3cgv_A 343 NWVAKEKLAM 352 (397)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9888777654
No 22
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.38 E-value=8.2e-13 Score=117.24 Aligned_cols=122 Identities=11% Similarity=-0.070 Sum_probs=82.2
Q ss_pred ChHHHHHHHHHHHhccCCHHHHHHHHhCCCCCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHH
Q 036400 11 NPELIQKEVLEKYAKVLPPFYSVIVRRSDASTLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALED 90 (198)
Q Consensus 11 ~~~~~k~~l~~~~~~~~~~~~~~li~~~~~~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieD 90 (198)
+.++..+.+.+.+. .+.+. ++..+ ...+++... ..++|..|||+|||||||.|+|+.|||+|+||+|
T Consensus 305 ~~~~~~~~l~~~l~-~~~~~----l~~~~---~~~~~~~~~-----~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~d 371 (526)
T 2pyx_A 305 NDIDAQKTLFNYLG-VDGAA----ADKLE---PRQLAINPG-----YRAKCWQNNCIAIGMAAGFIEPLEASALALIEWT 371 (526)
T ss_dssp CHHHHHHHHHHHHT-CCHHH----HHHCC---CEEEECCCE-----EESCSEETTEEECGGGTEECCCTTCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH-hcCcc----cccCC---ceEEecccC-----ccccccCCCEEEEEhhhcccCccccccHHHHHHH
Confidence 34566777777787 56333 22232 122333211 1236778999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-cCCCChHHHHHH
Q 036400 91 AVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSGWVQ-DGGSNWWMRFLR 158 (198)
Q Consensus 91 a~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~~~~-~~~~~~~~~~~r 158 (198)
|..|+++|.... . ..+.++..|++.|+++...+........... ..+ +++++..+
T Consensus 372 a~~La~~L~~~~----------~--~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~-~~fw~~~~ 427 (526)
T 2pyx_A 372 ASTLAQQLPPNR----------M--VMDTISARVNERYQQHWQQIIDFLKLHYVISQRQE-DRYWRDHR 427 (526)
T ss_dssp HHHHHHTCCSCH----------H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCS-SHHHHHTT
T ss_pred HHHHHHHhhhcC----------C--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-CHHHHHHh
Confidence 999999986311 1 4568899999999999888777543322221 123 45555544
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.37 E-value=3.7e-13 Score=121.14 Aligned_cols=82 Identities=15% Similarity=-0.000 Sum_probs=67.2
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHH---HHHHHHHHHHH-HHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQA---IDGYVKERKWR-VTG 134 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~a---l~~Ye~~R~~r-~~~ 134 (198)
++|+.+||+|||||||.|+|+.|||+|+||+||..||+.|..+... .+....++ |..|+++|+++ +.+
T Consensus 342 ~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~--------g~~~~~~a~~~L~~Ye~~r~~~~v~~ 413 (584)
T 2gmh_A 342 PKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTS--------ENLQSKTIGLHVTEYEDNLKNSWVWK 413 (584)
T ss_dssp CCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTC--------CCCCCSSSSCCCTHHHHHHHTSHHHH
T ss_pred CccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHc--------CCcchhhhhhhHHHHHHHHHHhHHHH
Confidence 4789999999999999999999999999999999999999886532 00001343 89999999988 788
Q ss_pred HHHHHHHhhhhhcC
Q 036400 135 LVIGSYLSGWVQDG 148 (198)
Q Consensus 135 ~~~~s~~~~~~~~~ 148 (198)
.+..++.+..+++.
T Consensus 414 ~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 414 ELYSVRNIRPSCHG 427 (584)
T ss_dssp HHHHTTTTTGGGGS
T ss_pred HHHHHhChhHHHHH
Confidence 88888888776643
No 24
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.36 E-value=3.3e-12 Score=115.22 Aligned_cols=126 Identities=12% Similarity=-0.073 Sum_probs=86.6
Q ss_pred HHHHHHhccCCHHHHHHHHhCCC-CCcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHH
Q 036400 18 EVLEKYAKVLPPFYSVIVRRSDA-STLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGR 96 (198)
Q Consensus 18 ~l~~~~~~~~~~~~~~li~~~~~-~~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~ 96 (198)
.+.+.+. .+.|.+..++..... ......+.+ .....+|..+||+|||||||.|+|+.|||+|+|++||..|++
T Consensus 267 ~~~~~l~-~~~p~l~~~l~~~~~~~~~~~~~~~-----~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~ 340 (591)
T 3i3l_A 267 AFYSSTL-AKCAKAMDILGGAEQVDEVRIVQDW-----SYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAA 340 (591)
T ss_dssp HHHHHHH-TTCHHHHHHHTTCEECSCCEEEEEE-----EEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HhCHHHHHHHhcCccccCceEeccc-----ccchhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHH
Confidence 3444444 566777777765431 111111111 112246889999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhhcCCCChHHHHHH
Q 036400 97 HIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIGSYLSG--WVQDGGSNWWMRFLR 158 (198)
Q Consensus 97 ~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~s~~~~--~~~~~~~~~~~~~~r 158 (198)
+|...... .. ....++..|++.++++...+.......- .......+++++..|
T Consensus 341 ~L~~~l~~-------~~--~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~FW~~~r 395 (591)
T 3i3l_A 341 AIDRITRH-------GD--EKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEFWRKRR 395 (591)
T ss_dssp HHHHHHHC-------GG--GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHHS
T ss_pred HHHHHHhC-------Cc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHHHHhhh
Confidence 99887643 12 5677899999999999999888877554 333332145554443
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.30 E-value=2e-12 Score=114.96 Aligned_cols=68 Identities=13% Similarity=-0.053 Sum_probs=58.3
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|..|||+|||||||.|+|+.|||+|+||+||..|+++|.. .. ..+.+|..|++.|+++...+...
T Consensus 325 ~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~-----------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 391 (538)
T 2aqj_A 325 KRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD-----------TS--FDPRLSDAFNAEIVHMFDDCRDF 391 (538)
T ss_dssp SCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB-----------TT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc-----------cC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 357789999999999999999999999999999999998863 12 45678999999999988887664
Q ss_pred H
Q 036400 139 S 139 (198)
Q Consensus 139 s 139 (198)
.
T Consensus 392 ~ 392 (538)
T 2aqj_A 392 V 392 (538)
T ss_dssp H
T ss_pred H
Confidence 3
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.27 E-value=3.7e-12 Score=112.28 Aligned_cols=86 Identities=13% Similarity=-0.037 Sum_probs=67.0
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|..|||+|||||||.++|+.|||+|+|++||..|+++|.. .. ..+.+|+.|++.|+++...+...
T Consensus 333 ~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~-----------~~--~~~~~l~~Y~~~~~~~~~~~~~~ 399 (511)
T 2weu_A 333 ERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG-----------ER--WDPVLISAYNERMAHMVDGVKEF 399 (511)
T ss_dssp SCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC-----------TT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc-----------CC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999864 11 34678999999999999888776
Q ss_pred HHHhhhhhc-CCCChHHHHHH
Q 036400 139 SYLSGWVQD-GGSNWWMRFLR 158 (198)
Q Consensus 139 s~~~~~~~~-~~~~~~~~~~r 158 (198)
......... .. ++++...+
T Consensus 400 ~~~~y~~~~r~~-~~fw~~~~ 419 (511)
T 2weu_A 400 LVLHYKGAQRED-TPYWKAAK 419 (511)
T ss_dssp HHHHHHHCCCCC-SHHHHHHH
T ss_pred HHHHhhhcCCCC-cHHHHhcc
Confidence 544333322 23 45655554
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.24 E-value=6.1e-12 Score=112.29 Aligned_cols=86 Identities=10% Similarity=-0.051 Sum_probs=67.0
Q ss_pred cCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 036400 59 GNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTGLVIG 138 (198)
Q Consensus 59 ~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~~~~~ 138 (198)
++|..+||+|||||||.++|+.|||+|+|++||..|+++|.. .. ..+.+|..|++.|+++...+...
T Consensus 356 ~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~-----------~~--~~~~~l~~Y~~~~~~~~~~i~~~ 422 (550)
T 2e4g_A 356 RRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPD-----------KS--LNPVLTARFNREIETMFDDTRDF 422 (550)
T ss_dssp SCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCC-----------TT--CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhccc-----------cC--CCHHHHHHHHHHHHHHHHHHHHH
Confidence 356689999999999999999999999999999999998863 12 45678999999999999988877
Q ss_pred HHHhhhhhc-CCCChHHHHHH
Q 036400 139 SYLSGWVQD-GGSNWWMRFLR 158 (198)
Q Consensus 139 s~~~~~~~~-~~~~~~~~~~r 158 (198)
......+.. .+ .++++..+
T Consensus 423 ~~~~y~~~~r~~-~~fw~~~~ 442 (550)
T 2e4g_A 423 IQAHFYFSPRTD-TPFWRANK 442 (550)
T ss_dssp HHHHHHTCCCCS-SHHHHHHT
T ss_pred HHHHHHhcCCCC-hHHHHHhh
Confidence 654443322 23 45655444
No 28
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.16 E-value=6.1e-11 Score=101.37 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=62.7
Q ss_pred cCCHHHHHHHHhCCCC-CcccccccccCCccccccCccCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHHh
Q 036400 26 VLPPFYSVIVRRSDAS-TLHWAPLMFRHPWNVFFGNLSKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLIK 104 (198)
Q Consensus 26 ~~~~~~~~li~~~~~~-~~~~~~l~~~~~~~~~~~~w~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~~ 104 (198)
.+.|.+..++...... .+..++.+.. ...+|..+|++|||||||.++|+.|||+|+|++||..|++.|.....+
T Consensus 254 ~~~p~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~ 328 (421)
T 3nix_A 254 ANEGHIAERFKSEEFLFEPRTIEGYAI-----SASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKG 328 (421)
T ss_dssp HTCTTTHHHHTTCCBSSCCEEEECCCB-----EESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhCcHHHHHHhcCccccCceeecccce-----eeeeeccCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcC
Confidence 3456666667665421 2222222211 124678899999999999999999999999999999999999887543
Q ss_pred hcCCCCCCCchhHHHHHHHHHHHHHHHHH
Q 036400 105 TKGHIATTGDNNVAQAIDGYVKERKWRVT 133 (198)
Q Consensus 105 ~~~~~~~~~~~~~~~al~~Ye~~R~~r~~ 133 (198)
. ....+..|++.++....
T Consensus 329 --------~---~~~~~~~y~~~~~~~~~ 346 (421)
T 3nix_A 329 --------E---EVNWEKDFVEHMMQGID 346 (421)
T ss_dssp --------C---CCCHHHHTHHHHHHHHH
T ss_pred --------C---chhHHHHHHHHHHHHHH
Confidence 1 11245567766655444
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.69 E-value=3.5e-09 Score=93.42 Aligned_cols=64 Identities=16% Similarity=0.130 Sum_probs=49.0
Q ss_pred cccCccCCC-EEEecCCCCc-CCCCchhhHhhHHHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHHHHHHHHHH
Q 036400 57 FFGNLSKGN-VTVAGDAMHP-MTPDLGQGGCQALEDAVVLGRHIGNLLIKTKGHIATTGDNNVAQAIDGYVKERKWRVTG 134 (198)
Q Consensus 57 ~~~~w~~gr-VvLiGDAAH~-m~P~~GqGan~AieDa~~La~~L~~~~~~~~~~~~~~~~~~~~~al~~Ye~~R~~r~~~ 134 (198)
+.++|..|| |+|+|||||. +.| .|||+|++|+||..|++.|+....+ . ...+.| .+|++..+.
T Consensus 386 ~a~~~~~gRr~~l~Gda~~~~~~p-~g~G~n~g~~~a~~l~~~l~~~~~g--------~--~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 386 VQEKHGARLLLGLVGDCLVEPFWP-LGTGVARGFLAAFDAAWMVKRWAEG--------A--GPLEVL----AERESLYQL 450 (497)
T ss_dssp EEEETTEEEEEEECGGGTBCCCGG-GCCHHHHHHHHHHHHHHHHHHHHTT--------C--CHHHHH----HHHHHHHTT
T ss_pred HHHhcCCcccceEeccccccCcCc-cccchhhHHHHHHHHHHHHHHHhCC--------C--Cccchh----hhHHHHhhh
Confidence 346788998 9999999994 555 9999999999999999999987532 2 334455 667765554
Q ss_pred H
Q 036400 135 L 135 (198)
Q Consensus 135 ~ 135 (198)
+
T Consensus 451 l 451 (497)
T 2bry_A 451 L 451 (497)
T ss_dssp G
T ss_pred h
Confidence 3
No 30
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.02 E-value=0.0004 Score=53.20 Aligned_cols=36 Identities=17% Similarity=-0.004 Sum_probs=31.8
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
..+||+|+|||++ |.|++.||.++..+|+.|.+.+.
T Consensus 293 ~~~~v~l~GDa~~------g~gv~~A~~sG~~aA~~I~~~L~ 328 (336)
T 3kkj_A 293 ADLGIYVCGDWCL------SGRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTTEEECCGGGT------TSSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEecccC------CcCHHHHHHHHHHHHHHHHHHhh
Confidence 4799999999964 77999999999999999988764
No 31
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.59 E-value=0.0087 Score=48.71 Aligned_cols=35 Identities=17% Similarity=-0.014 Sum_probs=30.6
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
.+||+|+|||+|. .|++.|+.++..||+.|.....
T Consensus 294 ~~rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~ 328 (336)
T 1yvv_A 294 DLGIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQ 328 (336)
T ss_dssp TTTEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhh
Confidence 4999999999974 3999999999999999987653
No 32
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=35.38 E-value=72 Score=27.37 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=28.9
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNL 101 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~ 101 (198)
...+|.-|||+|....|-.||- |++-|..+|+-|...
T Consensus 363 ~~~~IfAiGD~a~~~~p~~a~~---A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLPPTAQV---AHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSCCCHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCCCchHH---HHHHHHHHHHHHHHH
Confidence 3578999999998877777764 677788888887653
No 33
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=34.34 E-value=38 Score=28.01 Aligned_cols=32 Identities=13% Similarity=0.090 Sum_probs=25.7
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~ 100 (198)
.+++.+.||+. .|.|.+-|+..+..+|+.|..
T Consensus 435 ~~~l~~aG~~~------~g~gv~~a~~sG~~aA~~i~~ 466 (470)
T 3i6d_A 435 YPGVYMTGASF------EGVGIPDCIDQGKAAVSDALT 466 (470)
T ss_dssp STTEEECSTTT------SCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecC------CCCCHHHHHHHHHHHHHHHHH
Confidence 47899999963 366788899999988888765
No 34
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=32.26 E-value=63 Score=24.90 Aligned_cols=40 Identities=18% Similarity=0.021 Sum_probs=27.6
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
...+|..+||++... + ....+..|+.++...|..+.....
T Consensus 278 ~~~~vya~GD~~~~~-~-~~~~~~~A~~~g~~aa~~i~~~l~ 317 (323)
T 3f8d_A 278 SVPGVFAAGDCTSAW-L-GFRQVITAVAQGAVAATSAYRYVT 317 (323)
T ss_dssp SSTTEEECSTTBSTT-T-TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEcceecCCC-C-cccceeehhhHHHHHHHHHHHHHH
Confidence 357899999999753 1 123456778888888877766543
No 35
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=32.04 E-value=32 Score=28.37 Aligned_cols=36 Identities=22% Similarity=0.399 Sum_probs=33.0
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
..||.++| ..||.|+|..++-|+...+.-.|..+..
T Consensus 204 ~PrIAV~g-----LNPHAGE~G~~G~EE~~iI~PAi~~lr~ 239 (334)
T 3lxy_A 204 QPQIYVCG-----LNPHAGEGGHMGHEEIDTIIPALNTLRQ 239 (334)
T ss_dssp SCCEEEEC-----SSGGGGGGGTTCSHHHHTHHHHHHHHHH
T ss_pred CCCEEEEe-----cCCCCCCCCCCCchhHHHHHHHHHHHHH
Confidence 68999999 9999999999999999999999987754
No 36
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=28.71 E-value=48 Score=27.60 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=27.1
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~ 100 (198)
.+++.|+||. +.|.|.+-++..+..+|+.|..
T Consensus 441 ~~~l~l~G~~------~~G~gv~~a~~sg~~aA~~il~ 472 (477)
T 3nks_A 441 RLPLTLAGAS------YEGVAVNDCIESGRQAAVSVLG 472 (477)
T ss_dssp TCSEEECSTT------TSCCSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEccC------CCCCcHHHHHHHHHHHHHHHHh
Confidence 3689999998 4578999999999999988864
No 37
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=28.45 E-value=61 Score=25.21 Aligned_cols=36 Identities=11% Similarity=0.051 Sum_probs=26.1
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
..+|..+||++....+ .+..|+.++...|..+...+
T Consensus 299 ~~~vya~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~l 334 (338)
T 3itj_A 299 VPGFFAAGDVQDSKYR----QAITSAGSGCMAALDAEKYL 334 (338)
T ss_dssp STTEEECGGGGCSSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeccCCCCcc----ceeeehhhhHHHHHHHHHHH
Confidence 4789999999984322 34667888888887776654
No 38
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=27.28 E-value=76 Score=24.34 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=25.2
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
..+|..+||+++.. | ..+..|+.++...|..+....
T Consensus 276 ~~~v~a~GD~~~~~-~---~~~~~A~~~g~~aa~~i~~~l 311 (315)
T 3r9u_A 276 VAGLFAAGDLRKDA-P---KQVICAAGDGAVAALSAMAYI 311 (315)
T ss_dssp STTEEECGGGBTTC-C---CCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecccCCc-h---hhhhhHHhhHHHHHHHHHHHH
Confidence 46899999998642 2 234567788888877776644
No 39
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=25.80 E-value=48 Score=27.88 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=23.1
Q ss_pred CCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 64 GNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 64 grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
.++.|+||..|+ |.|...++..+..-|+.+.+-+
T Consensus 458 ~gLyl~G~~t~p-----G~Gv~ga~~SG~~aA~~il~dL 491 (501)
T 4dgk_A 458 TNLYLVGAGTHP-----GAGIPGVIGSAKATAGLMLEDL 491 (501)
T ss_dssp TTEEECCCH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCC-----cccHHHHHHHHHHHHHHHHHHh
Confidence 579999998874 7789889999988888776533
No 40
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=25.56 E-value=1e+02 Score=21.59 Aligned_cols=37 Identities=22% Similarity=0.105 Sum_probs=26.5
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
...+|..+||++....| -+..|+.++..+|..+....
T Consensus 134 ~~~~i~a~GD~~~~~~~----~~~~A~~~g~~aa~~i~~~~ 170 (180)
T 2ywl_A 134 SYPRVYAAGVARGKVPG----HAIISAGDGAYVAVHLVSDL 170 (180)
T ss_dssp SSTTEEECGGGGTCCSC----CHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEeecccCcchh----hHHHHHHhHHHHHHHHHHHh
Confidence 34789999999987544 24567778888887776543
No 41
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=24.40 E-value=41 Score=27.85 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=30.3
Q ss_pred CCCEEEecCCCCcCCCCchh-----hHhhHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQ-----GGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~Gq-----Gan~AieDa~~La~~L~~ 100 (198)
..+|..+||++....|..|. -+..|+.++..+|..|..
T Consensus 265 ~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g 307 (408)
T 2gqw_A 265 CPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVD 307 (408)
T ss_dssp STTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcC
Confidence 46899999999987776553 356789999999988864
No 42
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=24.12 E-value=84 Score=24.89 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=23.1
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~ 100 (198)
..+|..+||++....+..+ +...+-.-+..+|+.|..
T Consensus 300 ~~~v~a~GD~~~~~~~~~~-~~~~~~~~a~~~a~~l~~ 336 (369)
T 3d1c_A 300 YPNIFMIGATVENDNAKLC-YIYKFRARFAVLAHLLTQ 336 (369)
T ss_dssp STTEEECSTTCCCSSCCCC-SHHHHGGGHHHHHHHHHH
T ss_pred CCCeEEeccccccCCeeEE-EEehhhHHHHHHHHHHhc
Confidence 4689999999876554433 222334445667777754
No 43
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=23.50 E-value=85 Score=23.80 Aligned_cols=37 Identities=16% Similarity=0.301 Sum_probs=26.6
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
...+|..+||++.. |. .+..|+.++...|..+.....
T Consensus 256 ~~~~vya~GD~~~~--~~---~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 256 TARGIFACGDVARP--AG---SVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp SSTTEEECSGGGCT--TC---CHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeecCCc--hH---HHHHHHHhHHHHHHHHHHHHh
Confidence 34789999999975 32 356778888888877766443
No 44
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=23.23 E-value=1.1e+02 Score=25.16 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=29.2
Q ss_pred cCCCEEEecCCCCcCCCC-------chhhHhhHHHHHHHHHHHHHHHHHh
Q 036400 62 SKGNVTVAGDAMHPMTPD-------LGQGGCQALEDAVVLGRHIGNLLIK 104 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~-------~GqGan~AieDa~~La~~L~~~~~~ 104 (198)
...+|..+||+++...|. .-.-+..|+..+..+|..|.....+
T Consensus 285 ~~~~Ifa~GD~~~~~~~~~~~~~~~~pk~~~~A~~~g~~aa~ni~~~l~g 334 (430)
T 3h28_A 285 TYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRN 334 (430)
T ss_dssp SSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEEeeeccCCccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhcC
Confidence 357899999999876421 1122356788888888888766543
No 45
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=22.91 E-value=90 Score=25.47 Aligned_cols=37 Identities=32% Similarity=0.433 Sum_probs=27.5
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
..+|..+||+++...|-.+ ..|...+..+|..|....
T Consensus 299 ~~~vfa~GD~~~~~~~~~~---~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 299 YDNVYAVGDANSMTVPKLG---YLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CTTEEECGGGBTTCCSCCH---HHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEeehhccCCCCcHH---HHHHHHHHHHHHHHHHHh
Confidence 4689999999986444333 467888888888887655
No 46
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=22.84 E-value=42 Score=27.61 Aligned_cols=37 Identities=24% Similarity=0.416 Sum_probs=33.5
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
.+.||.+.| .+||.|+|..++-|+...+.-.+..+..
T Consensus 198 ~~PrIaV~G-----LNPHAGE~G~~G~EE~~iI~Pai~~~r~ 234 (328)
T 1yxo_A 198 AHPRILVCG-----LNPHAGEGGHLGREEIEVIEPCLERLRG 234 (328)
T ss_dssp SSCEEEEEC-----SSGGGGTTTTTCSHHHHTHHHHHHHHHT
T ss_pred CCCCEEEEe-----cCCCCCCCCCCCHhHHHHHHHHHHHHHH
Confidence 468999999 9999999999999999999999988754
No 47
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=21.82 E-value=44 Score=27.52 Aligned_cols=37 Identities=27% Similarity=0.395 Sum_probs=33.4
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
.+.||.+.| ..||.|+|..++-|+...+.-.+..+..
T Consensus 204 ~~PrIaV~G-----LNPHAGE~G~~G~EE~~iI~PAi~~~r~ 240 (330)
T 2hi1_A 204 VKPRIAVAG-----VNPHAGENGLFGDEETRILTPAITDARA 240 (330)
T ss_dssp SSCEEEEEC-----SSGGGSSTTSCCHHHHHTHHHHHHHHHT
T ss_pred CCCCEEEEe-----cCCCCCCCCCCCHhHHHHHHHHHHHHHH
Confidence 468999999 9999999999999999999999988754
No 48
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=21.39 E-value=86 Score=24.25 Aligned_cols=39 Identities=10% Similarity=-0.109 Sum_probs=26.6
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
..+|..+||++.... .-.-+..|+.++...|..+.....
T Consensus 277 ~~~vya~GD~~~~~~--~~~~~~~A~~~g~~aa~~i~~~l~ 315 (332)
T 3lzw_A 277 IEGFFAAGDICTYEG--KVNLIASGFGEAPTAVNNAKAYMD 315 (332)
T ss_dssp STTEEECGGGEECTT--CCCCHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCEEEccceecCCC--CcceEeeehhhHHHHHHHHHHhhC
Confidence 468999999986421 122345677788888888776554
No 49
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=21.24 E-value=72 Score=26.58 Aligned_cols=38 Identities=24% Similarity=0.148 Sum_probs=29.3
Q ss_pred CCCEEEecCCCCcCCCCch-----hhHhhHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLG-----QGGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~G-----qGan~AieDa~~La~~L~~ 100 (198)
..+|..+||++....+..| +-+..|+..+..++..|..
T Consensus 272 ~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~~i~g 314 (449)
T 3kd9_A 272 VENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGSNIAG 314 (449)
T ss_dssp STTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHHHhcC
Confidence 4689999999987666555 3457889999988888753
No 50
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=20.82 E-value=79 Score=25.86 Aligned_cols=32 Identities=19% Similarity=0.122 Sum_probs=25.3
Q ss_pred CCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHH
Q 036400 64 GNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHI 98 (198)
Q Consensus 64 grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L 98 (198)
.++.|+||..++ -.|..+.-|+..+...|+.|
T Consensus 372 ~gl~laGd~~~~---~~g~~~~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 372 NEVLVVGDGYRP---PGGIEVDGIALGVMKALEKL 403 (421)
T ss_dssp SSEEECSTTCCC---TTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEECCcccC---CCceeeehHHHHHHHHHHHh
Confidence 789999999873 23445578888888888888
No 51
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=20.80 E-value=96 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.101 Sum_probs=26.7
Q ss_pred CCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGNLL 102 (198)
Q Consensus 63 ~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~~~ 102 (198)
.+++.++||+.| |.|.+-||..+...|+.|....
T Consensus 460 ~~~l~~aG~~~~------g~~v~gai~sG~~aA~~il~~l 493 (504)
T 1sez_A 460 LPGLFYAGNHRG------GLSVGKALSSGCNAADLVISYL 493 (504)
T ss_dssp STTEEECCSSSS------CSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeecCC------CCCHHHHHHHHHHHHHHHHHHH
Confidence 478999999975 4578888888888888876644
No 52
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=20.73 E-value=1.3e+02 Score=24.36 Aligned_cols=38 Identities=26% Similarity=0.289 Sum_probs=26.4
Q ss_pred CCCEEEecCCCCcC-CCCchhhHhhHHHHHHHHHHHHHHHHH
Q 036400 63 KGNVTVAGDAMHPM-TPDLGQGGCQALEDAVVLGRHIGNLLI 103 (198)
Q Consensus 63 ~grVvLiGDAAH~m-~P~~GqGan~AieDa~~La~~L~~~~~ 103 (198)
..+|.-+||+|... .|-+| ..|...|..+|+.|.....
T Consensus 286 ~p~VfAiGDva~~~~~pk~a---~~A~~qa~v~A~ni~~~l~ 324 (401)
T 3vrd_B 286 QPGIHVIGDACNAAPMPKSA---YSANSQAKVAAAAVVALLK 324 (401)
T ss_dssp STTEEECGGGBCCTTSCBSH---HHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEecccccCCCCCchH---HHHHHHHHHHHHHHHHHhc
Confidence 46899999988643 34444 4567778888887766554
No 53
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=20.18 E-value=1e+02 Score=23.02 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=24.7
Q ss_pred cCCCEEEecCCCCcCCCCchhhHhhHHHHHHHHHHHHHH
Q 036400 62 SKGNVTVAGDAMHPMTPDLGQGGCQALEDAVVLGRHIGN 100 (198)
Q Consensus 62 ~~grVvLiGDAAH~m~P~~GqGan~AieDa~~La~~L~~ 100 (198)
...+|..+||+| . .. -+..+++.+..+|..|..
T Consensus 197 ~~p~iya~G~~a-~-~g----~~~~~~~~g~~~a~~i~~ 229 (232)
T 2cul_A 197 RLEGLYAVGLCV-R-EG----DYARMSEEGKRLAEHLLH 229 (232)
T ss_dssp TSBSEEECGGGT-S-CC----CHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeecc-c-Cc----cHHHHHHHHHHHHHHHHh
Confidence 467899999999 2 22 233568999999988865
Done!