BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036401
(1154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6Q1P4|SMC1_ARATH Structural maintenance of chromosomes protein 1 OS=Arabidopsis
thaliana GN=SMC1 PE=2 SV=2
Length = 1218
Score = 1628 bits (4216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 820/1204 (68%), Positives = 1003/1204 (83%), Gaps = 53/1204 (4%)
Query: 1 MPSLLSP-GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRT 59
MP++ SP GKI +LE+ENFKSYKG Q++GPF DFTAIIGPNG+GKSNLMDAISFVLGVRT
Sbjct: 1 MPAIQSPSGKILQLEMENFKSYKGHQLVGPFKDFTAIIGPNGSGKSNLMDAISFVLGVRT 60
Query: 60 GQLRGGQLKDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGR 119
GQLRG QLKDLIYA+DD++KEQ+GR+AFVRLVYQ+ + EL+FTR+ITS+GGSEYRID R
Sbjct: 61 GQLRGSQLKDLIYAFDDRDKEQRGRKAFVRLVYQMDDGVELRFTRSITSAGGSEYRIDNR 120
Query: 120 VVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEV 179
VVN DEYN KLRSLGILVKARNFLVFQGDVESIASKNPKELT LLE+ISGS+ELK+EYE
Sbjct: 121 VVNLDEYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEEISGSEELKKEYEG 180
Query: 180 LEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFN 239
LE++K AEEK+AL+YQKK+T+ E+K KK QKEEAE+HLRLQ++LK+LK+E FLWQL+N
Sbjct: 181 LEEKKASAEEKAALIYQKKKTIGNEKKLKKAQKEEAEKHLRLQEELKALKRERFLWQLYN 240
Query: 240 IEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRK-ELAKYLKEIAQCEKKIAERNN 298
IE DI KA++D+++EK +R++VMRELE FE ++ GKRK E AKYLKEIAQ EKKIAE+++
Sbjct: 241 IENDIEKANEDVDSEKSNRKDVMRELEKFE-REAGKRKVEQAKYLKEIAQREKKIAEKSS 299
Query: 299 RLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEE 358
+L K QPELL+ EE++RI +KI++++K+++++++E+ KH+ +I+++QK I++L K+E
Sbjct: 300 KLGKIQPELLRFKEEIARIKAKIETNRKDVDKRKKEKGKHSKEIEQMQKSIKELNKKMEL 359
Query: 359 LNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEAN 418
N+K +D +G+LP+LD+QL +YF++KEEAGMKT KLRDE EVL+R++ DLE L+NLE N
Sbjct: 360 FNKKRQDSSGKLPMLDSQLQDYFRLKEEAGMKTIKLRDEHEVLERQRRTDLEALRNLEEN 419
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
QQL NR+++LD Q + + RQ I +S +K+E T LK ELR++Q+KH ++R+ L
Sbjct: 420 YQQLINRKNDLDEQIKRFKDRQGEIETSSSKYKNETTSLKTELRALQEKHVNAREASAKL 479
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAV 538
K++I E+E+QL +L A+R+ENERD++L+QAVE+LKRLFQGVHGRMTDLCRP +KKYNLAV
Sbjct: 480 KTRIAELEDQLSDLTAERYENERDSRLTQAVESLKRLFQGVHGRMTDLCRPNRKKYNLAV 539
Query: 539 TVAMGKFMDAVVVEDENTGKECIK------------------------------------ 562
TVAMG+FMDAVVVEDENTGK+CIK
Sbjct: 540 TVAMGRFMDAVVVEDENTGKDCIKYLKEQRLPPMTFIPLQSVRVKQVFERLRNLGGTAKL 599
Query: 563 -------------AVLFAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGG 609
AVL+AVGNTLVCD L+EAKVLSWSGERF+VVTVDGILLTKAGTMTGG
Sbjct: 600 VFDVIQFDPELEKAVLYAVGNTLVCDELEEAKVLSWSGERFKVVTVDGILLTKAGTMTGG 659
Query: 610 TTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQY 669
T+GGMEA+S +WDDKKIEGLK+ KE +E +LE +GSIREMQ++ESE SGKISGLEKKIQY
Sbjct: 660 TSGGMEAKSNKWDDKKIEGLKKNKEDFEQQLENIGSIREMQMKESEISGKISGLEKKIQY 719
Query: 670 AEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDR 729
AEIEK+SI+DKL L QE+R I EEI RIKP+L K + ++D+R T++NKLE+R+NEI DR
Sbjct: 720 AEIEKKSIKDKLPQLEQEERNIIEEIDRIKPELSKARTEVDKRKTEMNKLEKRMNEIVDR 779
Query: 730 LYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKK 789
+Y+DFS+SVGV NIR YEE QLK A+ AEERL LSNQLAKLKYQLEYEQ RDV SRI+K
Sbjct: 780 IYKDFSQSVGVPNIRVYEETQLKTAEKEAEERLELSNQLAKLKYQLEYEQNRDVGSRIRK 839
Query: 790 LESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQ 849
+ESS+S+LE DL+ ++K + K T +I WK+EM K S+E EKEI +W+KQ
Sbjct: 840 IESSISSLETDLEGIQKTMSERKETAVKITNEINNWKKEMEECKQKSEEYEKEILDWKKQ 899
Query: 850 ASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPV 909
AS ATTS++KLNRQI+SKE QIEQLIS+KQEI EKCELE I LP + D ME D S GP
Sbjct: 900 ASQATTSITKLNRQIHSKETQIEQLISQKQEITEKCELEHITLPVLSDAMEEDDSD-GPQ 958
Query: 910 FDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTV 969
FDFS+L R+YLQERRPS REK+E EF+QK+++ SEIE+TAPNL+ALDQYEA+ EKE+ V
Sbjct: 959 FDFSELGRAYLQERRPSAREKVEAEFRQKIESKTSEIERTAPNLRALDQYEAIQEKEKQV 1018
Query: 970 TEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAY 1029
++EFEAARKEEKQ ADA+N+VKQKRY LFMEAFNHI+S+ID+IYKQLT+SNTHPLGGTAY
Sbjct: 1019 SQEFEAARKEEKQVADAFNTVKQKRYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAY 1078
Query: 1030 LNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDE 1089
LNLENEDDPFLHGIKYT MPPTKRFRDMEQLSGGEKTVAALALLFSIHSY+PSPFFILDE
Sbjct: 1079 LNLENEDDPFLHGIKYTTMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYRPSPFFILDE 1138
Query: 1090 VDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYR 1149
VDAALDNLNVAKVA FIRSKSC+ R NQDA++GNGFQSIVISLKDSFYDKAEALVGVYR
Sbjct: 1139 VDAALDNLNVAKVAKFIRSKSCQAARDNQDAEDGNGFQSIVISLKDSFYDKAEALVGVYR 1198
Query: 1150 DSDR 1153
D++R
Sbjct: 1199 DTER 1202
>sp|Q14683|SMC1A_HUMAN Structural maintenance of chromosomes protein 1A OS=Homo sapiens
GN=SMC1A PE=1 SV=2
Length = 1233
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/1232 (35%), Positives = 720/1232 (58%), Gaps = 120/1232 (9%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + +E+ENFKSYKG QIIGPF FTAIIGPNG+GKSNLMDAISFVLG +T LR L
Sbjct: 2 GFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYN 127
+DLI+ + RAFV +VY + F R I G SEY+I+ +VV EY+
Sbjct: 62 RDLIHGAPVGKP--AANRAFVSMVYSEEGAEDRTFARVIVG-GSSEYKINNKVVQLHEYS 118
Query: 128 AKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKA 187
+L LGIL+KARNFLVFQG VESIA KNPKE TAL E+IS S EL +EY+ + E KA
Sbjct: 119 EELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKA 178
Query: 188 EEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKA 247
EE + Y +K+ + ERK+ K++KEEA+R+ RL+D++ + + L++L++ E +I K
Sbjct: 179 EEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKL 238
Query: 248 SKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPEL 307
+K+L ++ + E+ + ++ ED+ + K+KEL K ++E Q EK+I E+++ L++ +P+
Sbjct: 239 NKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQY 298
Query: 308 LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQK---GIQDLTGKLEELNEKSR 364
+K E S K++++KK L+ ++ +K D+ EL+K ++ + EE E+
Sbjct: 299 IKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEES 358
Query: 365 DGAGR-LPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHA-----DLEVLKNLEAN 418
GR L L + Q+ +Y ++KEEA + A L E E +R+Q A DLE K +E
Sbjct: 359 QSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETE 418
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
++ + E++ + ++ K ++ I S +E KL+ EL ++ ++++ + +
Sbjct: 419 A-KIKQKLREIEENQKRIEKLEEYIT-TSKQSLEEQKKLEGEL---TEEVEMAKRRIDEI 473
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQG-VHGRMTDLCRPTQKKYNLA 537
++ ++ QL + + DR E+ R + ++ +E++KRL+ G V+GR+ DLC+PTQKKY +A
Sbjct: 474 NKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIA 533
Query: 538 VTVAMGKFMDAVVVEDENTGKECI------------------------------------ 561
VT +GK MDA++V+ E TG++CI
Sbjct: 534 VTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKL 593
Query: 562 -------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGTMT 607
KA+ +A GN LVCD +++A+ +++ G +R + V +DG L K+G ++
Sbjct: 594 VIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIS 653
Query: 608 GGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL--GSIREMQLRESETSGKISGLEK 665
GG + ++A++++WD+K ++ LK KKE+ EL+E +E +LR+ ++ GL+
Sbjct: 654 GGAS-DLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA--HGLQM 710
Query: 666 KIQYAE--IEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
+++Y++ +E+ NL QEK ++ E+ P + +K I R ++ L+ ++
Sbjct: 711 RLKYSQSDLEQTKTRHLALNL-QEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKM 769
Query: 724 NEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE--QKR 781
N++ D ++ +F +GV NIRE+EE ++K +A++RL NQ +L QL++E Q +
Sbjct: 770 NQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLK 829
Query: 782 DVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEK 841
+ + ++ E ++ EN+++++KK+E + + K + KS ++
Sbjct: 830 EDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNH 889
Query: 842 EIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLP----TVED 897
E++E K+ A ++ L +++ + E ++EQ S + +++ C+++ I LP T++D
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD 949
Query: 898 PMETDSSSPG--PVFDFSQLNRSYLQER----------RPSEREKLEVEFKQKMDALISE 945
+ + SS G V +++ Y +E + + E E KQ+M+ L +
Sbjct: 950 ISQEEGSSQGEDSVSGSQRISSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNTLQQK 1009
Query: 946 IEK--------TAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGL 997
+ + APN+KA+++ E++ +K + ++EFEAARK K+A A+ +K++R+
Sbjct: 1010 LNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDR 1069
Query: 998 FMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDM 1057
F F ++++ID IYK L+R+++ A+L EN ++P+L GI Y + P KRFR M
Sbjct: 1070 FNACFESVATNIDEIYKALSRNSS----AQAFLGPENPEEPYLDGINYNCVAPGKRFRPM 1125
Query: 1058 EQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS-CEGTRG 1116
+ LSGGEKTVAALALLF+IHSYKP+PFF+LDE+DAALDN N+ KVA +I+ +S C
Sbjct: 1126 DNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTC----- 1180
Query: 1117 NQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
FQ+IVISLK+ FY KAE+L+GVY
Sbjct: 1181 --------NFQAIVISLKEEFYTKAESLIGVY 1204
>sp|Q9CU62|SMC1A_MOUSE Structural maintenance of chromosomes protein 1A OS=Mus musculus
GN=Smc1a PE=1 SV=4
Length = 1233
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1236 (35%), Positives = 716/1236 (57%), Gaps = 128/1236 (10%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + +E+ENFKSYKG QIIGPF FTAIIGPNG+GKSNLMDAISFVLG +T LR L
Sbjct: 2 GFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYN 127
+DLI+ + RAFV +VY + F R I G SEY+I+ +VV EY+
Sbjct: 62 RDLIHGAPVGKP--AANRAFVSMVYSEEGAEDRTFARVIVG-GSSEYKINNKVVQLHEYS 118
Query: 128 AKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKA 187
+L LGIL+KARNFLVFQG VESIA KNPKE TAL E+IS S EL +EY+ + E KA
Sbjct: 119 EELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKA 178
Query: 188 EEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKA 247
EE + Y +K+ + ERK+ K++KEEA+R+ RL+D++ + + L++L++ E +I K
Sbjct: 179 EEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKL 238
Query: 248 SKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPEL 307
+K+L ++ + E+ + ++ ED+ + K+KEL K ++E Q EK+I E+++ L++ +P+
Sbjct: 239 NKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQY 298
Query: 308 LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQK---GIQDLTGKLEELNEKSR 364
+K E S K++++KK L+ ++ +K D+ EL+K ++ + EE E+
Sbjct: 299 IKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEES 358
Query: 365 DGAGR-LPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHA-----DLEVLKNLEAN 418
GR L L + Q+ +Y ++KEEA + A L E E +R+Q A DLE K +E
Sbjct: 359 QSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETE 418
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
++ + E++ + ++ K ++ I S +E KL+ EL ++ ++++ + +
Sbjct: 419 A-KIKQKLREIEENQKRIEKLEEYIT-TSKQSLEEQKKLEGEL---TEEVEMAKRRIDEI 473
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQG-VHGRMTDLCRPTQKKYNLA 537
++ ++ QL + + DR E+ R + ++ +E++KRL+ G V+GR+ DLC+PTQKKY +A
Sbjct: 474 NKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIA 533
Query: 538 VTVAMGKFMDAVVVEDENTGKECI------------------------------------ 561
VT +GK MDA++V+ E TG++CI
Sbjct: 534 VTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKL 593
Query: 562 -------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGTMT 607
KA+ +A GN LVCD +++A+ +++ G +R + V +DG L K+G ++
Sbjct: 594 VIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIS 653
Query: 608 GGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL--GSIREMQLRESETSGKISGLEK 665
GG + ++A++++WD+K ++ LK KKE+ EL+E +E +LR+ ++ GL+
Sbjct: 654 GGAS-DLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA--HGLQM 710
Query: 666 KIQYAE--IEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
+++Y++ +E+ NL QEK ++ E+ P + +K I R ++ L+ ++
Sbjct: 711 RLKYSQSDLEQTKTRHLALNL-QEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKM 769
Query: 724 NEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE--QKR 781
N++ D ++ +F +GV NIRE+EE ++K +A++RL NQ +L QL++E Q +
Sbjct: 770 NQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLK 829
Query: 782 DVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEK 841
+ + ++ E ++ EN+++++KK+E + + K + KS ++
Sbjct: 830 EDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNH 889
Query: 842 EIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMET 901
E++E K+ A ++ L +++ + E ++EQ S + +++ C+++ I LP + M+
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD 949
Query: 902 DSSSPGPVFDFSQLNRSYLQERRPSE---REKL-----------------EVEFKQKMDA 941
S G SQ S +R S RE L E E KQ+M+
Sbjct: 950 ISQEEGS----SQGEESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNT 1005
Query: 942 LISEIEK--------TAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQK 993
L ++ + APN+KA+++ E++ +K + ++EFEAARK K+A A+ +K++
Sbjct: 1006 LQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE 1065
Query: 994 RYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKR 1053
R+ F F ++++ID IYK L+R+++ A+L EN ++P+L GI Y + P KR
Sbjct: 1066 RFDRFNACFESVATNIDEIYKALSRNSS----AQAFLGPENPEEPYLDGINYNCVAPGKR 1121
Query: 1054 FRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS-CE 1112
FR M+ LSGGEKTVAALALLF+IHSYKP+PFF+LDE+DAALDN N+ KVA +I+ +S C
Sbjct: 1122 FRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTC- 1180
Query: 1113 GTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
FQ+IVISLK+ FY KAE+L+GVY
Sbjct: 1181 ------------NFQAIVISLKEEFYTKAESLIGVY 1204
>sp|O97593|SMC1A_BOVIN Structural maintenance of chromosomes protein 1A OS=Bos taurus
GN=SMC1A PE=1 SV=1
Length = 1233
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/1236 (35%), Positives = 716/1236 (57%), Gaps = 128/1236 (10%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + +E+ENFKSYKG QIIGPF FTAIIGPNG+GKSNLMDAISFVLG +T LR L
Sbjct: 2 GFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYN 127
+DLI+ + RAFV +VY + F R I G SEY+I+ +VV EY+
Sbjct: 62 RDLIHGAPVGKP--AANRAFVSMVYSEEGAEDRTFARVIVG-GSSEYKINNKVVQLHEYS 118
Query: 128 AKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKA 187
+L LGIL+KARNFLVFQG VESIA KNPKE TAL E+IS S EL +EY+ + E KA
Sbjct: 119 EELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKA 178
Query: 188 EEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKA 247
EE + Y +K+ + ERK+ K++KEEA+R+ RL+D++ + + L++L++ E +I K
Sbjct: 179 EEDTQFNYHRKKNIAAERKEAKQEKEEADRYQRLKDEVVRAQVQLQLFKLYHNEVEIEKL 238
Query: 248 SKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPEL 307
+K+L ++ + E+ + ++ ED+ + K+KEL K ++E Q EK+I E+++ L++ +P+
Sbjct: 239 NKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQY 298
Query: 308 LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQK---GIQDLTGKLEELNEKSR 364
+K E S K++++KK L+ ++ +K D+ EL+K ++ + EE E+
Sbjct: 299 IKAKENTSHKIKKLEAAKKSLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEES 358
Query: 365 DGAGR-LPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHA-----DLEVLKNLEAN 418
GR L L + Q+ +Y ++KEEA + A L E E +R+Q A DLE K +E
Sbjct: 359 QSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETE 418
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
++ + E++ + ++ K ++ I S +E KL+ EL ++ ++++ + +
Sbjct: 419 A-KIKQKLREIEENQKRIEKLEEYIT-TSKQSLEEQKKLEGEL---TEEVEMAKRRIDEI 473
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQG-VHGRMTDLCRPTQKKYNLA 537
++ ++ QL + + DR E+ R + ++ +E++KRL+ G V+GR+ DLC+PTQKKY +A
Sbjct: 474 NKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIA 533
Query: 538 VTVAMGKFMDAVVVEDENTGKECI------------------------------------ 561
VT +GK MDA++V+ E TG++CI
Sbjct: 534 VTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKL 593
Query: 562 -------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGTMT 607
KA+ +A GN LVCD +++A+ +++ G +R + V +DG L K+G ++
Sbjct: 594 VIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIS 653
Query: 608 GGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL--GSIREMQLRESETSGKISGLEK 665
GG + ++A++++WD+K ++ LK KKE+ EL+E +E +LR+ ++ GL+
Sbjct: 654 GGAS-DLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA--HGLQM 710
Query: 666 KIQYAE--IEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
+++Y++ +E+ NL QEK ++ E+ P + +K I R ++ L+ ++
Sbjct: 711 RLKYSQSDLEQTKTRHLALNL-QEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKM 769
Query: 724 NEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE--QKR 781
N++ D ++ +F +GV NIRE+EE ++K +A++RL NQ +L QL++E Q +
Sbjct: 770 NQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLK 829
Query: 782 DVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEK 841
+ + ++ E ++ EN+++++KK+E + + K + KS ++
Sbjct: 830 EDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNH 889
Query: 842 EIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMET 901
E++E K+ A ++ L +++ + E ++EQ S + +++ C+++ I LP + M+
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD 949
Query: 902 DSSSPGPVFDFSQLNRSYLQERRPSE---REKL-----------------EVEFKQKMDA 941
S G SQ S +R S RE L E E KQ+M+
Sbjct: 950 ISQEEGS----SQGEDSVSGSQRTSNIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNT 1005
Query: 942 LISEIEK--------TAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQK 993
L ++ + APN+KA+++ E++ +K + ++EFEAARK K+A A+ +K++
Sbjct: 1006 LQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE 1065
Query: 994 RYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKR 1053
R+ F F ++++ID IYK L+R+++ A+L EN ++P+L GI Y + P KR
Sbjct: 1066 RFDRFNACFESVATNIDEIYKALSRNSS----AQAFLGPENPEEPYLDGINYNCVAPGKR 1121
Query: 1054 FRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS-CE 1112
FR M+ LSGGEKTVAALALLF+IHSYKP+PFF+LDE+DAALDN N+ KVA +I+ +S C
Sbjct: 1122 FRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTC- 1180
Query: 1113 GTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
FQ+IVISLK+ FY KAE+L+GVY
Sbjct: 1181 ------------NFQAIVISLKEEFYTKAESLIGVY 1204
>sp|Q9Z1M9|SMC1A_RAT Structural maintenance of chromosomes protein 1A OS=Rattus norvegicus
GN=Smc1a PE=1 SV=1
Length = 1233
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/1236 (35%), Positives = 716/1236 (57%), Gaps = 128/1236 (10%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + +E+ENFKSYKG QIIGPF FTAIIGPNG+GKSNLMDAISFVLG +T LR L
Sbjct: 2 GFLKLIEIENFKSYKGRQIIGPFQRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYN 127
+DLI+ + RAFV +VY + F R I G SEY+I+ +VV EY+
Sbjct: 62 RDLIHGAPVGKP--AANRAFVSMVYSEEGAEDRTFARVIVG-GSSEYKINNKVVQLHEYS 118
Query: 128 AKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKA 187
+L LGIL+KARNFLVFQG VESIA KNPKE TAL E+IS S EL +EY+ + E KA
Sbjct: 119 EELEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKA 178
Query: 188 EEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKA 247
EE + Y +K+ + ERK+ K++KEEA+R+ L+D++ + + L++L++ E +I K
Sbjct: 179 EEDTQFNYHRKKNIAAERKEAKQEKEEADRYQALKDEVVRAQVQLQLFKLYHNEVEIEKL 238
Query: 248 SKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPEL 307
+K+L ++ + E+ + ++ ED+ + K+KEL K ++E Q EK+I E+++ L++ +P+
Sbjct: 239 NKELASKNKEIEKDKKRMDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQY 298
Query: 308 LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQK---GIQDLTGKLEELNEKSR 364
+K E S K++++KK L+ +++ +K D+ EL+K ++ + EE E+
Sbjct: 299 IKAKENTSHKIKKLEAAKKSLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEES 358
Query: 365 DGAGR-LPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHA-----DLEVLKNLEAN 418
GR L L + Q+ +Y ++KEEA + A L E E +R+Q A DLE K +E
Sbjct: 359 QSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETE 418
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
++ + E++ + ++ K ++ I S +E KL+ EL ++ ++++ + +
Sbjct: 419 A-KIKQKLREIEENQKRIEKLEEYIT-TSKQSLEEQKKLEGEL---TEEVEMAKRRIDEI 473
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQG-VHGRMTDLCRPTQKKYNLA 537
++ ++ QL + + DR E+ R + ++ +E++KRL+ G V+GR+ DLC+PTQKKY +A
Sbjct: 474 NKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIA 533
Query: 538 VTVAMGKFMDAVVVEDENTGKECI------------------------------------ 561
VT +GK MDA++V+ E TG++CI
Sbjct: 534 VTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELKGAKL 593
Query: 562 -------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGTMT 607
KA+ +A GN LVCD +++A+ +++ G +R + V +DG L K+G ++
Sbjct: 594 VIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIS 653
Query: 608 GGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL--GSIREMQLRESETSGKISGLEK 665
GG + ++A++++WD+K ++ LK KKE+ EL+E +E +LR+ ++ GL+
Sbjct: 654 GGAS-DLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA--HGLQM 710
Query: 666 KIQYAE--IEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
+++Y++ +E+ NL QEK ++ E+ P + +K I R ++ L+ ++
Sbjct: 711 RLKYSQSDLEQTKTRHLALNL-QEKSKLESELANFGPRINDIKRIIQSREREMKDLKEKM 769
Query: 724 NEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE--QKR 781
N++ D ++ +F +GV NIRE+EE ++K +A++RL NQ +L QL++E Q +
Sbjct: 770 NQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDFEKNQLK 829
Query: 782 DVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEK 841
+ + ++ E ++ EN+++++KK+E + + K + KS ++
Sbjct: 830 EDQDKVHMWEQTVKKDENEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNH 889
Query: 842 EIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMET 901
E++E K+ A ++ L +++ + E ++EQ S + +++ C+++ I LP + M+
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLSKGTMDD 949
Query: 902 DSSSPGPVFDFSQLNRSYLQERRPSE---REKL-----------------EVEFKQKMDA 941
S G SQ S +R S RE L E E KQ+M+
Sbjct: 950 ISQEEGG----SQGEESVSGSQRTSSIYAREALIEIDYGDLCEDLKDAQAEEEIKQEMNT 1005
Query: 942 LISEIEK--------TAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQK 993
L ++ + APN+KA+++ E++ +K + ++EFEAARK K+A A+ +K++
Sbjct: 1006 LQQKLNEQQSVLQRIAAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKE 1065
Query: 994 RYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKR 1053
R+ F F ++++ID IYK L+R+++ A+L EN ++P+L GI Y + P KR
Sbjct: 1066 RFDRFNACFESVATNIDEIYKALSRNSS----AQAFLGPENPEEPYLDGINYNCVAPGKR 1121
Query: 1054 FRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS-CE 1112
FR M+ LSGGEKTVAALALLF+IHSYKP+PFF+LDE+DAALDN N+ KVA +I+ +S C
Sbjct: 1122 FRPMDNLSGGEKTVAALALLFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKEQSTC- 1180
Query: 1113 GTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
FQ+IVISLK+ FY KAE+L+GVY
Sbjct: 1181 ------------NFQAIVISLKEEFYTKAESLIGVY 1204
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 630 bits (1625), Expect = e-179, Method: Compositional matrix adjust.
Identities = 432/1237 (34%), Positives = 717/1237 (57%), Gaps = 130/1237 (10%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + +E+ENFKSYKG QIIGPF FTAIIGPNG+GKSNLMDAISFVLG +T LR L
Sbjct: 2 GFLKLIEIENFKSYKGRQIIGPFHRFTAIIGPNGSGKSNLMDAISFVLGEKTSNLRVKTL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYN 127
+DLI+ + RAFV +VY + E F+R I G SEY+I+ +VV EY+
Sbjct: 62 RDLIHGA--PVGKPAANRAFVSMVYSEDSGEEKVFSRVIVG-GSSEYKINNKVVQLSEYS 118
Query: 128 AKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKA 187
L LGIL+KARNFLVFQG VESIA KNPKE TAL E+IS S EL +EY+ + E KA
Sbjct: 119 DSLEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDKRKKEMVKA 178
Query: 188 EEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKA 247
EE + Y +K+ + ERK+ K++KEEAER+ RL+D++ + + L++L++ E +I K
Sbjct: 179 EEDTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARAQIQLQLFKLYHNESEIEKL 238
Query: 248 SKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPEL 307
+K+L + + E+ + ++ E++ + K+KEL K ++E EK+I E++ L++ P+
Sbjct: 239 NKELSVKNKGIEKDKKHMDKVEEELKDKKKELGKMMREQQAIEKEIKEKDAELNQKLPQY 298
Query: 308 LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQK---GIQDLTGKLEELNEKSR 364
+K E S K +++KK L+ +++ +K D+ EL+K ++ + EE E+
Sbjct: 299 IKAKENPSHKIKKFRAAKKSLQNAQKQYKKRKADMDELEKEMLSVEKARQEFEERMEEES 358
Query: 365 DGAGR-LPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHA-----DLEVLKNLEAN 418
GR L L + Q+ +Y ++KEEA + A L E E +R+Q A DLE K +E
Sbjct: 359 QSQGRDLTLEENQVKKYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETE 418
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENL 478
++ + EL+ + ++ K ++ I K L + K ++ ++ ++++ + +
Sbjct: 419 A-KIKQKLRELEENQKRIEKLEEYI----ATSKQSLEEQKNLEETLTEEVEMAKRRIDEI 473
Query: 479 KSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQG-VHGRMTDLCRPTQKKYNLA 537
S++ ++ QL + + DR E+ R + ++ +E++KRL+ G V+GR+ DLC+PTQKKY +A
Sbjct: 474 NSELNQVMEQLGDARIDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIA 533
Query: 538 VTVAMGKFMDAVVVEDENTGKECI------------------------------------ 561
VT +GK MDA++V+ E TG++CI
Sbjct: 534 VTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDERLRELKGAKL 593
Query: 562 -------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGTMT 607
KA+ +A GN LVCD +++A+ +++ G +R + V +DG L K+G ++
Sbjct: 594 VIDVIRYEPPHIKKALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVIS 653
Query: 608 GGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL--GSIREMQLRESETSGKISGLEK 665
GG + ++A++++WD+K ++ LK KKE+ EL+E +E +LR+ ++ GL+
Sbjct: 654 GGAS-DLKAKARRWDEKAVDKLKEKKERLTEELKEQMKAKRKEAELRQVQSQA--HGLQM 710
Query: 666 KIQYAEIEKRSIEDK-LANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRIN 724
+++Y++ + + + LA QEK ++ E+ P + +K I R ++ L+ ++N
Sbjct: 711 RLKYSQSDLEQTKTRHLAMNMQEKSKLESELANFSPRINDIKRIIQSRDREMKDLKEKMN 770
Query: 725 EITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE--QKRD 782
++ D ++ +F +GV NIRE+EE ++K +A++RL NQ +L QL+YE Q ++
Sbjct: 771 QVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRLEFENQKTRLGIQLDYEKNQLKE 830
Query: 783 VESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKE 842
+ +++ E S+ +N+++++KK+E + + K + KS ++
Sbjct: 831 DQGKVQTWEQSVKKDDNEIEKLKKEEQRHMKIIDETMAQLQDLKNQHLAKKSEVNDKNHL 890
Query: 843 IQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLP----TVEDP 898
+++ K+ +A ++ L +++ + E ++EQ S + +++ C++ I LP T++D
Sbjct: 891 MEDIRKKLGSANKEVTHLQKEVTAIETKLEQKRSDRHNLLQACKMSDIKLPLSKGTMDDI 950
Query: 899 METDSSSPG-----------PVF--------DFSQLNRSYLQERRPSEREKLEVEFKQKM 939
+ + SS G V+ D+S L+ L++ + + KQ+M
Sbjct: 951 SQEEGSSQGEESASSSQRSSTVYAKEALIEIDYSDLSED-LKDAVADD------DIKQEM 1003
Query: 940 DALISEIEK--------TAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVK 991
AL +I + +APN+KA+++ E++ +K + ++EFEAARK K+A A+ K
Sbjct: 1004 SALHQKINEQQSILQRISAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQTK 1063
Query: 992 QKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPT 1051
++R+ F F ++++ID IYK L+R+++ A+L EN ++P+L GI Y + P
Sbjct: 1064 KERFDRFNACFESVATNIDEIYKALSRNSS----AQAFLGPENPEEPYLDGINYNCVAPG 1119
Query: 1052 KRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSC 1111
KRFR M+ LSGGEKTVAALALLF+IHSYKPSPFF+LDE+DAALDN N+ KVA +I+ +S
Sbjct: 1120 KRFRPMDNLSGGEKTVAALALLFAIHSYKPSPFFVLDEIDAALDNTNIGKVANYIKEQSM 1179
Query: 1112 EGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
+ FQ+IVISLK+ FY KAE+L+GVY
Sbjct: 1180 ------------SNFQAIVISLKEEFYTKAESLIGVY 1204
>sp|O94383|SMC1_SCHPO Structural maintenance of chromosomes protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=psm1 PE=1 SV=2
Length = 1228
Score = 606 bits (1563), Expect = e-172, Method: Compositional matrix adjust.
Identities = 424/1258 (33%), Positives = 687/1258 (54%), Gaps = 164/1258 (13%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G++ RLE+ENFKSY+G QIIGPF DFT+IIGPNGAGKSNLMDAISFVLGV++ LR +
Sbjct: 2 GRLLRLEVENFKSYRGHQIIGPFEDFTSIIGPNGAGKSNLMDAISFVLGVKSSHLRSTNV 61
Query: 68 KDLIYA-------YDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRV 120
K+LIY D A+V+L+Y+L N + ++ R IT SG +EY+ID +
Sbjct: 62 KELIYRGKILQRDNTDFTDSSNPTTAYVKLMYELDNGEQREYKRAITPSGATEYKIDEEI 121
Query: 121 VNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVL 180
V + EY L+ ILV+ARNFLVFQGDVE+IAS++P EL+ L+EQISGS E K EY+
Sbjct: 122 VTFSEYCGSLQKENILVRARNFLVFQGDVETIASQSPLELSKLVEQISGSLEYKSEYDKS 181
Query: 181 EDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNI 240
+DE+ KA SA + KKR + E +Q +EQK EAER+ +++ S + + LW+LF++
Sbjct: 182 KDEQDKAVNLSAHSFNKKRGINAELRQYQEQKTEAERYQSQKEKRDSAQLVYLLWKLFHL 241
Query: 241 EKDITKASKDLEAEKRS-------REEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKI 293
EK I+ ++ K R+E +E+E ++++ R+ L + +++ + EK I
Sbjct: 242 EKSISSNMAEVTRLKADSIQLIERRDENTKEIEKLKEKEGSIRRNLLAFDRKVRKQEKLI 301
Query: 294 AERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLT 353
A + +PEL+ + E+ S ++ +++ ++ A+ ++ L+ + L+
Sbjct: 302 ASK-------RPELISIAEKALESKSNLRKIQRKAAEIEKDYSDQASTLQVLENQLTSLS 354
Query: 354 GK----LEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDR-----E 404
L+++ EK + RL D + EY ++ EA + L + + L+R
Sbjct: 355 AAEKEFLKDMQEKEQLKGLRLLPEDKE--EYEGLRSEADKLNSNLLFKLQTLNRNIKVTS 412
Query: 405 QHAD--LEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELR 462
Q D ++ +LE+ ++ L LD + D L K+ +++
Sbjct: 413 QSKDSLTSIVGDLESKIKSLHESVSSLDTE-----------------RADLLAKINEKIE 455
Query: 463 SMQDKHRDSRQK---YENLKSKIGEIENQLR-------ELKADRHENERDAKLSQAVETL 512
S++ + D ++K Y L K E+ +L+ E ADR+E+++DAK +A+ L
Sbjct: 456 SLELEKHDQQKKRLTYSELFHKTQELNEELQSCLQKILEASADRNESKQDAKKREALYAL 515
Query: 513 KRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI----------- 561
KR++ V GR+ DLC PTQKKY A+ A+GK DA+VVE + KECI
Sbjct: 516 KRIYPEVKGRIIDLCTPTQKKYESAIAAALGKNFDAIVVETQAVAKECIDYIKEQRIGIM 575
Query: 562 --------------------------------------KAVLFAVGNTLVCDGLDEAKVL 583
+ ++ AVGNTL+CD + A+ L
Sbjct: 576 TFFPMDTIAASPVNQKFRGTHKGARLAIDVLNFESEYERVMISAVGNTLICDSMTVARDL 635
Query: 584 SWSGE-RFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEE 642
S++ + VT++G ++ K G +TGG++ A K WDD + L + K++ + +
Sbjct: 636 SYNKRLNAKTVTLEGTVIHKTGLITGGSSNNRSA--KHWDDHDFDLLTQTKDRL---MHQ 690
Query: 643 LGSIREMQ----LRESETSGKISGLEKKIQYAE----IEKRSIEDKLANLRQEKRTIKEE 694
+G I + + ES+T K+ LE +I + + RS+EDK + + IKE+
Sbjct: 691 IGEIEYQKSSCVITESDTV-KLHSLESEISLLKDKYTVVSRSVEDKKKEIGHYESLIKEK 749
Query: 695 IGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLKAA 754
+P L +L+ ++ ++L+ ++ ++ ++++ F + +G+++I Y+E
Sbjct: 750 ----QPHLSELEMELRNFVKSRDELQIQVEKVEEKIFSGFCKRIGISDIHTYDEIHRTFT 805
Query: 755 QNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKLESSLSTLENDLKQVKKKEGD---V 811
Q+ +++L + Q + L+ ++ +E++R ++R++ LE +E D + + E + +
Sbjct: 806 QSFTQKQLEFTKQKSLLENRISFEKQRVSDTRLR-LERMHKFIEKDQESIDNYEQNREAL 864
Query: 812 KSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQI 871
+S TA ++ KE+ S +++ E + + L+KL+ I E++I
Sbjct: 865 ESEVATAEAELELLKEDFASENSKTEKILLAASEKKLVGKRLVSELTKLSGNITLLESEI 924
Query: 872 EQLISRKQEIMEKCELECIVLPTVEDPMET----DSSSPG----------PVFDFSQLNR 917
++ +S I+ KC+LE I +P E + + D S+ G PV +F +
Sbjct: 925 DRYVSEWHAILRKCKLEDIDVPLREGSLTSIPIDDVSNSGDITMGEEPSEPVINFEKFGV 984
Query: 918 SYL-----QERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEE 972
+E R E + ++K+ E+++ +PNL+A+++ E + + + EE
Sbjct: 985 EVDYDELDEELRNDGSESMASVLQEKLREYSEELDQMSPNLRAIERLETVETRLAKLDEE 1044
Query: 973 FEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNL 1032
F AARK K A + +N+VKQKR F AF+HIS ID IYK+LT+S PLGGTAYL L
Sbjct: 1045 FAAARKAAKNAKERFNAVKQKRLQKFQAAFSHISEQIDPIYKELTKSPAFPLGGTAYLTL 1104
Query: 1033 ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA 1092
++ D+P+L GIK+ AMPP KRFRDM+QLSGGEKT+AALALLF+IHSY+PSPFF+LDE+DA
Sbjct: 1105 DDLDEPYLGGIKFHAMPPMKRFRDMDQLSGGEKTMAALALLFAIHSYQPSPFFVLDEIDA 1164
Query: 1093 ALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYRD 1150
ALD NV K+A +IR + +GFQ +VISLK+ + K+EALVG+YRD
Sbjct: 1165 ALDQTNVTKIANYIRQHA------------SSGFQFVVISLKNQLFSKSEALVGIYRD 1210
>sp|Q8NDV3|SMC1B_HUMAN Structural maintenance of chromosomes protein 1B OS=Homo sapiens
GN=SMC1B PE=1 SV=2
Length = 1235
Score = 562 bits (1449), Expect = e-159, Method: Compositional matrix adjust.
Identities = 398/1237 (32%), Positives = 657/1237 (53%), Gaps = 136/1237 (10%)
Query: 13 LELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLKDLIY 72
L +ENFKS++G Q+IGPF FT IIGPNG+GKSN+MDA+SFV+G + LR +++LI+
Sbjct: 7 LLVENFKSWRGRQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKIANLRVKNIQELIH 66
Query: 73 -AYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEYNAKLR 131
A+ K A V+++Y + E F R I G SE+R + +V+ Y A+L
Sbjct: 67 GAHIGKPI---SSSASVKIIYVEESGEEKTFARII-RGGCSEFRFNDNLVSRSVYIAELE 122
Query: 132 SLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGKAEEKS 191
+GI+VKA+N LVFQG VESI+ K PKE T E+IS S EL EYE + + KAEE +
Sbjct: 123 KIGIIVKAQNCLVFQGTVESISVKKPKERTQFFEEISTSGELIGEYEEKKRKLQKAEEDA 182
Query: 192 ALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKASKDL 251
+ KK+ + ER+Q K +KEEAER+ L ++LK K + L+QL++ EK I + L
Sbjct: 183 QFNFNKKKNIAAERRQAKLEKEEAERYQSLLEELKMNKIQLQLFQLYHNEKKIHLLNTKL 242
Query: 252 EAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPELLKLN 311
E R L H E+ + ++KE +++ Q EK++ L++ +P+ +K
Sbjct: 243 EHVNRDLSVKRESLSHHENIVKARKKEHGMLTRQLQQTEKELKSVETLLNQKRPQYIKAK 302
Query: 312 EEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKL--------EELNEKS 363
E S K+ +KK ++ ++ K +DIK L+ + DL EE+ K
Sbjct: 303 ENTSHHLKKLDVAKKSIKDSEKQCSKQEDDIKALETELADLDAAWRSFEKQIEEEILHKK 362
Query: 364 RDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLK-------NLE 416
RD + L +QL Y ++KE+ K A + + E L EQ D E L ++
Sbjct: 363 RD----IELEASQLDRYKELKEQVRKKVATMTQQLEKLQWEQKTDEERLAFEKRRHGEVQ 418
Query: 417 ANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYE 476
NL+Q+ Q + +KR + + + + D L + K++ ++ D+ ++ +
Sbjct: 419 GNLKQIKE-------QIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKTKSRMS 471
Query: 477 NLKSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLF-QGVHGRMTDLCRPTQKKYN 535
++ I ++L+ D HE +R K ++ +E LKRL+ V GR+ DLC P KKY
Sbjct: 472 EFNEELNLIRSELQNAGIDTHEGKRQQKRAEVLEHLKRLYPDSVFGRLFDLCHPIHKKYQ 531
Query: 536 LAVTVAMGKFMDAVVVEDENTGKECI---------------------------------- 561
LAVT G+F+ A+VV E K+CI
Sbjct: 532 LAVTKVFGRFITAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLRELKGC 591
Query: 562 ---------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVVTVDGILLTKAGT 605
K + F GN LVC+ ++EA+ ++ SG ER + V +DG L K+G
Sbjct: 592 KMVIDVIKTQFPQLKKVIQFVCGNGLVCETMEEARHIALSGPERQKTVALDGTLFLKSGV 651
Query: 606 MTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSI--REMQLRESETSGKISGL 663
++GG++ ++ +++ WD+K+++ L+ ++ Q EL+ L +E L++ +T I G
Sbjct: 652 ISGGSSD-LKYKARCWDEKELKNLRDRRSQKIQELKGLMKTLRKETDLKQIQTL--IQGT 708
Query: 664 EKKIQYAEIEKRSIEDK-LANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERR 722
+ +++Y++ E I+ K L QE+ ++ E+ I+ L + I R I + + +
Sbjct: 709 QTRLKYSQNELEMIKKKHLVAFYQEQSQLQSELLNIESQCIMLSEGIKERQRRIKEFQEK 768
Query: 723 INEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRD 782
I+++ D +++ F E +GV NIRE+E +K Q + ++R L +L QLEY +
Sbjct: 769 IDKVEDDIFQHFCEEIGVENIREFENKHVKRQQEIDQKRYFYKKMLTRLNVQLEYSR--- 825
Query: 783 VESRIKKLESSLSTLEN-------DLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSN 835
S +KK + ++TL+ D+ +KK E + + K+ S+
Sbjct: 826 --SHLKKKLNKINTLKETIQKGSEDIDHLKKAEENCLQTVNELMAKQQQLKDIRVTQNSS 883
Query: 836 SDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKC---ELECIVL 892
+++ + +I+E K+ A + KL +++ S + +EQ K ++ C ++E I+L
Sbjct: 884 AEKVQTQIEEERKKFLAVDREVGKLQKEVVSIQTSLEQKRLEKHNLLLDCKVQDIEIILL 943
Query: 893 P-----TVEDPMETDSSSPGPVFDFSQ------LNRSYLQE--RRPSEREKLEVEFKQKM 939
+E M T++ S D + ++ S L+E + +++E + +
Sbjct: 944 SGSLDDIIEVEMGTEAESTQATIDIYEKEEAFEIDYSSLKEDLKALQSDQEIEAHLRLLL 1003
Query: 940 DALISE----IEKTAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRY 995
+ S+ ++ APNL+AL+ + + +K + T+ FEA+RKE + + VK++RY
Sbjct: 1004 QQVASQEDILLKTAAPNLRALENLKTVRDKFQESTDAFEASRKEARLCRQEFEQVKKRRY 1063
Query: 996 GLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFR 1055
LF + F H+S SID+IYK+L R+N+ A+L+ EN ++P+L GI Y + P KRF
Sbjct: 1064 DLFTQCFEHVSISIDQIYKKLCRNNS----AQAFLSPENPEEPYLEGISYNCVAPGKRFM 1119
Query: 1056 DMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTR 1115
M+ LSGGEK VAALALLF++HS++P+PFF+LDEVDAALDN N+ KV+ +I+ ++
Sbjct: 1120 PMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQT----- 1174
Query: 1116 GNQDADEGNGFQSIVISLKDSFYDKAEALVGVYRDSD 1152
QD FQ IVISLK+ FY +A+AL+G+Y + D
Sbjct: 1175 --QDQ-----FQMIVISLKEEFYSRADALIGIYPEYD 1204
>sp|Q920F6|SMC1B_MOUSE Structural maintenance of chromosomes protein 1B OS=Mus musculus
GN=Smc1b PE=1 SV=1
Length = 1248
Score = 556 bits (1433), Expect = e-157, Method: Compositional matrix adjust.
Identities = 401/1241 (32%), Positives = 651/1241 (52%), Gaps = 143/1241 (11%)
Query: 8 GKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQL 67
G + L +ENFKS++G Q+IGPF FT IIGPNG+GKSN+MDA+SFV+G +T LR +
Sbjct: 2 GHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKTTNLRVKNI 61
Query: 68 KDLIY-AYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEY 126
++LI+ A+ K A V ++Y + E FTR I G SEY + V+ Y
Sbjct: 62 QELIHGAHTGKPV---SSSASVTIIYIEDSGEEKTFTRII-RGGCSEYHFGDKPVSRSVY 117
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGK 186
A+L ++GI+VKA+N LVFQG VESI+ K PKE T E+IS S E EYE + + K
Sbjct: 118 VAQLENIGIIVKAQNCLVFQGTVESISMKKPKERTQFFEEISTSGEFIGEYEAKKKKLQK 177
Query: 187 AEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITK 246
AEE + + K+ V ERK K +KEEAE + L ++LK K + L+QL+ E+ I
Sbjct: 178 AEEDAQFHFNVKKNVAAERKHAKIEKEEAEHYQNLLEELKINKIQLMLFQLYYNEEKINV 237
Query: 247 ASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPE 306
+ +LE + V L H E+ + K+K+ +++ Q K++ L++ +P+
Sbjct: 238 LNTELEQMDGNLSVVKDTLSHHENIFKAKKKDYGMLTRQLQQTAKELKSVEAILNQKRPQ 297
Query: 307 LLKLNEEMSR-------INSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEE- 358
+K E S I ++K+ ++ + R ++ +L + + ++EE
Sbjct: 298 YIKAKENTSHHLKKLDLSKKLITDNEKQCSKQEDGIRALVAELADLDRAWKSFEKQMEEK 357
Query: 359 LNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLK----- 413
+ +K RD + L ++QL Y +KE+ K + + E L EQ A+ E L
Sbjct: 358 ILQKGRD----IELENSQLDRYKLLKEQVRRKVGIMTQQLEKLQWEQKAEKERLAFEKRR 413
Query: 414 --NLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDS 471
+ + NL+Q+ + E + +++ + K +D K + LKKE+
Sbjct: 414 HGDTQGNLKQIKEQIEEHKKRIEKLEEYTKTCMDCLEDKKQQEEALKKEI---------- 463
Query: 472 RQKYENLKSKIGE-------IENQLRELKADRHENERDAKLSQAVETLKRLFQ-GVHGRM 523
EN KS++ E I N+L+ D HE +R K ++ +E LKRL+ V GR+
Sbjct: 464 ----ENTKSRMSEVNEELSLIRNELQNAGIDNHEGKRQQKRAEVLEHLKRLYPDSVFGRL 519
Query: 524 TDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI---------------------- 561
DLC P KKY LAVT G++M A+VV E K+CI
Sbjct: 520 LDLCHPIHKKYQLAVTKLFGRYMVAIVVASEKIAKDCIRFLKAERAEPETFLALDYLDIK 579
Query: 562 ---------------------------KAVLFAVGNTLVCDGLDEAKVLSWSG-ERFRVV 593
K + F GN LVC+ ++EA+ +++ G ER + V
Sbjct: 580 PINERLREIKGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKAV 639
Query: 594 TVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSI--REMQL 651
+DG L K+G ++GG++ ++ ++ WD+K++ L+ K+ Q EL+EL +E L
Sbjct: 640 ALDGTLFLKSGVISGGSSD-LKHKALCWDEKELHNLRDKRSQLVQELKELMKTLRKETDL 698
Query: 652 RESETSGKISGLEKKIQYAEIEKRSIEDK-LANLRQEKRTIKEEIGRIKPDLQKLKDKID 710
++ +T + G +++Y++ E I+ K LA +E+ ++ E+ I L + I+
Sbjct: 699 KQIQTL--VQGTNTRLKYSQNELEMIKKKHLATFYREQSQLQSELLNIDSQCTMLSEGIN 756
Query: 711 RRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAK 770
++ I + + +I+E+ D +++DF E +GV NIRE+E +K Q ++RL Q +
Sbjct: 757 KQQQKIEEFQDKIDEVEDDIFQDFCEEIGVENIREFENKHVKQQQENDQKRLEFEKQKTR 816
Query: 771 LKYQLEYE--QKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEE 828
L QLEY Q + + I L++++ + D+ +KK E + E + KE
Sbjct: 817 LNIQLEYSRNQLKKKLNNIDTLKTTIQKGKEDIDNLKKTEEECLKIVEELMVKQEQIKEV 876
Query: 829 MRGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELE 888
+ SN ++ +I+E K+ A + KL +++ + +EQ + K ++ C+++
Sbjct: 877 LATQSSNIEKIHIQIEEERKKVLAVDREVGKLQKEVVIIQGSLEQKLLEKHNLLLDCKVQ 936
Query: 889 ----CIVLPTVEDPME---TDSSSPGPVFDFS------QLNRSYLQERRPSEREKLEVEF 935
+VL ++ED +E T++ S D Q++ S L+E + + EVE
Sbjct: 937 DIDISLVLGSLEDIIEMELTETESTQATADIYEKEASIQIDYSPLREDLKALQSDKEVE- 995
Query: 936 KQKMDALISEI--------EKTAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAY 987
+ L+ ++ + TAPNL+A + + + +K + + FEA+RKE + +
Sbjct: 996 -AHLTLLLQQVASQENTLLKTTAPNLRAQENLKTVRDKFQESADVFEASRKEARICRQEF 1054
Query: 988 NSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTA 1047
VK++RY F + F HIS SID+IYK+L R+N+ A+L+ EN ++P+L GI Y
Sbjct: 1055 EQVKRRRYDAFSQCFEHISVSIDQIYKKLCRNNS----AQAFLSPENPEEPYLDGISYNC 1110
Query: 1048 MPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIR 1107
+ P KRF M+ LSGGEK VAALALLF++HS++P+PFF+LDEVDAALDN N+ KV+ +I+
Sbjct: 1111 VAPGKRFMPMDNLSGGEKCVAALALLFAVHSFRPAPFFVLDEVDAALDNTNIGKVSSYIK 1170
Query: 1108 SKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
+S E FQ I+ISLK+ FY KA+AL+GVY
Sbjct: 1171 EQSQE------------QFQMIIISLKEEFYSKADALIGVY 1199
>sp|P32908|SMC1_YEAST Structural maintenance of chromosomes protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC1 PE=1 SV=1
Length = 1225
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 389/1253 (31%), Positives = 660/1253 (52%), Gaps = 159/1253 (12%)
Query: 8 GKIHRLELENFKSYKGLQIIGPF--SDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGG 65
G++ LEL NFKSY+G+ +G F S+FT+IIGPNG+GKSN+MDAISFVLGVR+ LR
Sbjct: 2 GRLVGLELSNFKSYRGVTKVG-FGESNFTSIIGPNGSGKSNMMDAISFVLGVRSNHLRSN 60
Query: 66 QLKDLIY-------AYDDKEKE----QKGRRAFVRLVYQLGNESELQFTRTITSSGGSEY 114
LKDLIY DD + E + A+V+ YQ GN+ ++ R I+ +G + Y
Sbjct: 61 ILKDLIYRGVLNDENSDDYDNEGAASSNPQSAYVKAFYQKGNKL-VELMRIISRNGDTSY 119
Query: 115 RIDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELK 174
+IDG+ V++ +Y+ L + IL+KA+NFLVFQGDVE IA+++P EL+ + E++SGS + K
Sbjct: 120 KIDGKTVSYKDYSIFLENENILIKAKNFLVFQGDVEQIAAQSPVELSRMFEEVSGSIQYK 179
Query: 175 REYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFL 234
+EYE L+++ K + + + +R + E K KE + E + + D+ L+K L
Sbjct: 180 KEYEELKEKIEKLSKSATESIKNRRRIHGELKTYKEGINKNEEYRKQLDKKNELQKFQAL 239
Query: 235 WQLFNIEK---DITKASKDLEAEKRS-REEVMRELEHFEDQKRGKRKELAKYLKEIAQCE 290
WQL+++E+ ++T L +E S + ++ E++ + K KE A K+ ++ +
Sbjct: 240 WQLYHLEQQKEELTDKLSALNSEISSLKGKINNEMKSLQRSKSSFVKESAVISKQKSKLD 299
Query: 291 KKIAERNNRLDKSQPELLKLNEE-----MSRINSKIKSSKKELERKREERRKHANDIKEL 345
++ + S L+K+ ++ +S I +I+S +K+L+R++ + +K +
Sbjct: 300 YIFKDKEKLV--SDLRLIKVPQQAAGKRISHIEKRIESLQKDLQRQKTYVERFETQLKVV 357
Query: 346 QKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEK-EVLD-- 402
+ + EE+ + +R+ + L + L Y + E+ + + +EK VL+
Sbjct: 358 TRSKEAFE---EEIKQSARN-YDKFKLNENDLKTYNCLHEKYLTEGGSILEEKIAVLNND 413
Query: 403 -REQHADLEVLKNLEANL------QQLSNREHELDAQEDQMRK--RQKNILDASGGHKDE 453
RE +LE N A++ ++LS +LD Q + +R +KN L H E
Sbjct: 414 KREIQEELERF-NKRADISKRRITEELSITGEKLDTQLNDLRVSLNEKNALHTERLH--E 470
Query: 454 LTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETLK 513
L KL+ ++ S ++ D L K+ E ++ +L A++ E ++ KL + + LK
Sbjct: 471 LKKLQSDIESANNQEYD-------LNFKLRETLVKIDDLSANQRETMKERKLRENIAMLK 523
Query: 514 RLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI------------ 561
R F GV G + DLC P ++KY LAV+ +GK D+V+VE+ +ECI
Sbjct: 524 RFFPGVKGLVHDLCHPKKEKYGLAVSTILGKNFDSVIVENLTVAQECIAFLKKQRAGTAS 583
Query: 562 ------------------------------------KAVLFAVGNTLVCDGLDEAKVLSW 585
KA+ + G++++C+ L+ AK L W
Sbjct: 584 FIPLDTIETELPTLSLPDSQDYILSINAIDYEPEYEKAMQYVCGDSIICNTLNIAKDLKW 643
Query: 586 -SGERFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEELG 644
G R ++VT++G L+ KAG MTGG +G R WD ++ + L K++ +++EL
Sbjct: 644 KKGIRGKLVTIEGALIHKAGLMTGGISGDANNR---WDKEEYQSLMSLKDKLLIQIDELS 700
Query: 645 S-IREMQLRESETSGKISGLEKKIQYAEI----EKRSIEDKLANLRQEKRTIKEEIGRIK 699
+ R +R E +S L I +KRS+++ ++ I++E I+
Sbjct: 701 NGQRSNSIRAREVENSVSLLNSDIANLRTQVTQQKRSLDENRLEIKYHNDLIEKE---IQ 757
Query: 700 PDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNVAE 759
P + +LK K+D + L + + + ++++F+ +G I+EYE + + + ++
Sbjct: 758 PKITELKKKLDDLENTKDNLVKEKEALQNNIFKEFTSKIGFT-IKEYENHSGELMRQQSK 816
Query: 760 ERLNLSNQLAKLKYQLEYEQKR--DVESRIKKLESSLSTLENDLKQVKKKEGDVKSATET 817
E L Q+ ++ +L++E R + R +K + L + ++K ++++E A E
Sbjct: 817 ELQQLQKQILTVENKLQFETDRLSTTQRRYEKAQKDLENAQVEMKSLEEQE----YAIEM 872
Query: 818 ATGDITRWKEEMRGWKSNSDECEK-------EIQEWEKQASAATTSLSKLNRQINSKEAQ 870
G I EE K++ DE +K E+ E ++L L R+ + +
Sbjct: 873 KIGSIESKLEE---HKNHLDELQKKFVTKQSELNSSEDILEDMNSNLQVLKRERDGIKED 929
Query: 871 IEQLISRKQEIMEKCELECIVLP-----TVED-PMETDSSSPGPV-----FDFSQLNRSY 919
IE+ + ++ C++ I +P T++D P+ + + + ++ L + Y
Sbjct: 930 IEKFDLERVTALKNCKISNINIPISSETTIDDLPISSTDNEAITISNSIDINYKGLPKKY 989
Query: 920 LQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAARKE 979
+ S R++LE QK+ + + + PN +AL++Y+ + + E E + E
Sbjct: 990 KENNTDSARKELE----QKIHEVEEILNELQPNARALERYDEAEGRFEVINNETEQLKAE 1045
Query: 980 EKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTR---SNTHPLGGTAYLNLENED 1036
EK+ + + +K+KR LF + F+++S +D IY++LT+ SN GG A L +E+ED
Sbjct: 1046 EKKILNQFLKIKKKRKELFEKTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDED 1105
Query: 1037 DPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDN 1096
+PF GIKY A PP KRF+DME LSGGEKTVAALALLF+I+SY+PSPFF+LDEVDAALD
Sbjct: 1106 EPFNAGIKYHATPPLKRFKDMEYLSGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDI 1165
Query: 1097 LNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYR 1149
NV ++A +IR N D Q IVISLK++ ++K++ALVGVYR
Sbjct: 1166 TNVQRIAAYIRR------HRNPD------LQFIVISLKNTMFEKSDALVGVYR 1206
>sp|Q54LV0|SMC4_DICDI Structural maintenance of chromosomes protein 4 OS=Dictyostelium
discoideum GN=smc4 PE=3 SV=1
Length = 1415
Score = 283 bits (725), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 330/1277 (25%), Positives = 593/1277 (46%), Gaps = 207/1277 (16%)
Query: 10 IHRLELENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I ++ +ENFKSY G Q +GPF F++++GPNG+GKSN++DA+ FV G R Q+R ++
Sbjct: 160 ITKMVMENFKSYAGAQEVGPFHKCFSSVVGPNGSGKSNVIDAMLFVFGYRAKQIRLNKIS 219
Query: 69 DLIYAYDDKEKEQKGRRA--FVRLV-------YQLGNESELQFTRTITSSGG-----SEY 114
+LI+ ++ + GR + F ++ Y++ SE TRT +G S+Y
Sbjct: 220 ELIHNSENHKNLTNGRVSVHFQEIIDLPGEDNYEVVKGSEFVVTRTAQKTGNNKDGVSKY 279
Query: 115 RIDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKE-------LTALLEQI 167
++ +VV D+ L+ GI + FL+ QG+VE IA PK L LE I
Sbjct: 280 YLNDKVVKLDDLKTILKDKGIDLDNNRFLILQGEVEQIAMMKPKGVHPGEEGLLEYLEDI 339
Query: 168 SGSDELKREYEVLEDEKGKAEEKSALV--YQKKRTVVLERKQKKEQKEEAERHLRLQDQL 225
GS ++Y L D E S L+ KRT R + E++++A + R + L
Sbjct: 340 IGS----KKY--LPD----IEATSKLIEDIGDKRTSSNNRMKVVEKEKDALQQER-DNAL 388
Query: 226 KSLKKEHFLWQLFNIEKDITKASKDLEAEKRS--REEVMRELEHFEDQKRGKRKELAKYL 283
+ + KE L +I I ++ + E + + +E V ++LE ++ +L ++
Sbjct: 389 EYIDKELKLIHCKSIHYQIGRSKPEREKNEIAAKQEMVEKQLEQELVTQKASNDKLLEFE 448
Query: 284 KEIAQCEKKIAERNNRLDKSQPELL-------KLNEEMSRINSKIKSSKKELERKREERR 336
K + Q K++ E N ++ K + ELL K EE + +K+K + +E EE +
Sbjct: 449 KNLKQQNKQLDELNKQMAKCKNELLTTEKKGVKYKEETKHLKTKVKKNNSVIE---EETK 505
Query: 337 K----------HANDIKELQKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEE 386
K H DI +K +L +L +K L T+L + K++
Sbjct: 506 KQAEFERSTIIHKQDIVRFEKEYVELPKELIVEEKKLESMLNSLKGEVTELQREMEEKQK 565
Query: 387 AGMKTAKLRDEKEVLDREQHADLEVL-KNLEANLQQLSNREHELDAQEDQMRKRQKNILD 445
+ +K E + + + ++L VL K+ Q L + + A ED K I
Sbjct: 566 QLLPWSKKHSEAKAVVDLKTSELAVLSKDFNGATQNLDDA---IKALEDA-----KTI-- 615
Query: 446 ASGGHKDELTKLKKELRSMQDKHRDSRQKY-------ENLKSKIGEIENQLRELKADRHE 498
S K+ +TK KKEL S++ D ++ ENL + + QL ++K + E
Sbjct: 616 -SSTRKNNITKSKKELESVKAIIVDLEKRLASGKVTEENLYRNTMDAKRQLEQIKTNLSE 674
Query: 499 NERDAKLSQAVETLKRLFQ--GVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENT 556
N + + +K Q G+HGR+ DL QK Y++A++ A MD ++VE
Sbjct: 675 NSSRNTILDRLLKIKESGQISGIHGRLGDLGAIDQK-YDVAISTAAFSQMDNIIVETTAA 733
Query: 557 GKECIK---------------------------------------------------AVL 565
+ C++ A
Sbjct: 734 AEACVELLRKENLGRATFMILENLEYQRQNLGPVQTPNNTPRLFDLIKMKDEKKYATAFF 793
Query: 566 FAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGT----TGGMEARSK-- 619
AVG+TLV D LDEA +++ +R RVVT+DG L+ +G M+GG G M ++ K
Sbjct: 794 TAVGHTLVADTLDEATKIAYGAKRHRVVTLDGSLIDTSGAMSGGGLKPRVGAMNSKLKGD 853
Query: 620 -QWDDKKIEGLKRKKEQYESELEEL--------GSIREMQLRESETSGKISGLEKKIQYA 670
+ D KK+ L+ Q +S+L + I++ Q R SE ++ ++ I+ A
Sbjct: 854 PKEDKKKLIELQDNLSQLDSDLRQCRDELVEIENQIQQAQNRRSELELELPKMDMDIKAA 913
Query: 671 EIEKRSIEDKLANLRQEKRTI---KEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEIT 727
+ + + L+ + + KE+I IK L + +D+ +NKLE + EI
Sbjct: 914 ITKCEELTKVIPQLKNKAKLSTEKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQ 973
Query: 728 DRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQ-KRDVESR 786
+ + +VG ++ ++N++++ Q+ R++ SNQ K ++ + + +E
Sbjct: 974 NSIL-----NVGGPQLK-MQKNKVESLQS----RID-SNQTNTTKANVQIKSLAKSMEKS 1022
Query: 787 IKKL----------ESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNS 836
IK L E++L+ + K ++K+ A E + + +EE + +
Sbjct: 1023 IKILNENTKEKDENEAALAEILEKYKSLEKENLKATEAMEAVSEQLREKEEETKEIRKEH 1082
Query: 837 DECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVE 896
++ +K I++ + S T + + IN K+A+I +S+ +K + I V+
Sbjct: 1083 EKAKKVIEKIKVSNSKLETQIEEFKTLINEKQAEIADCLSKFANQAKKAK---IYKDYVD 1139
Query: 897 DPMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAP----N 952
+ + S+ + Q Y++ +E++ L K+ L ++I+K + N
Sbjct: 1140 ESLINQVSAILTPEEIEQ----YME---ATEQQNLIA----KIHELTTQIQKISKENNVN 1188
Query: 953 LKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRI 1012
++ + ++ ++ + EF+ KE + Y S+++ R FM F I+ + I
Sbjct: 1189 IEVVKDFQKKEQEYHSRKAEFDEIEKERDNLSKRYESLRKNRLDEFMAGFTIITMKLKEI 1248
Query: 1013 YKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALAL 1072
Y+ +T LGG A L + + +DPF GI ++ PP K ++++ LSGGEKT+++LAL
Sbjct: 1249 YQMIT------LGGDAELEIIDREDPFQEGISFSVRPPKKSWKNISNLSGGEKTLSSLAL 1302
Query: 1073 LFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVIS 1132
+F++H YKP+ +++DE+DAALD NV+ +A +I+ ++ Q I+IS
Sbjct: 1303 VFALHHYKPNALYVMDEIDAALDFKNVSIIANYIKERT-------------KNAQFIIIS 1349
Query: 1133 LKDSFYDKAEALVGVYR 1149
L++ ++ A+ LVG+Y+
Sbjct: 1350 LRNYMFELADRLVGIYK 1366
>sp|Q9FJL0|SMC4_ARATH Structural maintenance of chromosomes protein 4 OS=Arabidopsis
thaliana GN=SMC4 PE=2 SV=1
Length = 1241
Score = 264 bits (674), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 312/1273 (24%), Positives = 572/1273 (44%), Gaps = 213/1273 (16%)
Query: 10 IHRLELENFKSYKGLQIIGPFS-DFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I L + NFKSY G Q +GPF F+A++GPNG+GKSN++DA+ FV G R Q+R ++
Sbjct: 26 IKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVS 85
Query: 69 DLIYAYDDKEKEQKGRRAFVRL-----------VYQLGNESELQFTRTITSSGGSEYRID 117
+LI+ + Q A V + +Y+ S+ TR S+Y I+
Sbjct: 86 ELIH---NSTNHQNLDSAGVSVQFEEIIDLENGLYETVPGSDFMITRVAFRDNSSKYYIN 142
Query: 118 GRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKE-------LTALLEQISGS 170
R N+ E KL+ G+ + FL+ QG+VE I+ PK LE I G+
Sbjct: 143 ERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLMKPKAQGPHDEGFLEYLEDIIGT 202
Query: 171 -------DELKREYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAE------- 216
DEL ++ E L E +S +V Q + ER + K+EAE
Sbjct: 203 NKYVEKIDELNKQLETLN------ESRSGVV-QMVKLAEKERDNLEGLKDEAETYMLKEL 255
Query: 217 RHLRLQDQLKSLKKEHFLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFED--QKRG 274
HL+ Q++ + E + ++ + L+ E+ +E EL+ FE +K
Sbjct: 256 SHLKWQEKATKMAYEDTVAKITEQRDSLQNLENSLKDERVKMDESNEELKKFESVHEKHK 315
Query: 275 KRKELAKYLKEIAQCEKKIAE-------RNNRLDKSQPELLKLNEEMSRINSKIKSSKKE 327
KR+E+ E+ C++K E L + ++ KL +++ + +SKI KE
Sbjct: 316 KRQEVLD--NELRACKEKFKEFERQDVKHREDLKHVKQKIKKLEDKLEKDSSKIGDMTKE 373
Query: 328 LERKREERRKHANDIKELQKGIQDLTGKLEELNEKSR-DGAGRLPLLDTQLTEYFQIKEE 386
E K +I +LQK + D KLEE+ ++ + G L E +++
Sbjct: 374 SEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAKVETEGYRSELTKIRAELEPWEKD 433
Query: 387 AGMKTAKL---RDEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQEDQ----MRKR 439
+ KL E E+L ++ A L+ + + L +S R+ E A ++K+
Sbjct: 434 LIVHRGKLDVASSESELLSKKHEAALKAFTDAQKQLSDISTRKKEKAAATTSWKADIKKK 493
Query: 440 QKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHEN 499
++ ++A ++ L KE ++ + + +R+K LKS + ++Q LKA
Sbjct: 494 KQEAIEARKVEEESL----KEQETLVPQEQAAREKVAELKSAMNSEKSQNEVLKAVLRAK 549
Query: 500 ERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKE 559
E + +G++GRM DL KY++A++ A +D +VVE ++ +
Sbjct: 550 ENNQ------------IEGIYGRMGDLG-AIDAKYDVAISTACAG-LDYIVVETTSSAQA 595
Query: 560 CIK---------------------------------------------------AVLFAV 568
C++ A A+
Sbjct: 596 CVELLRKGNLGFATFMILEKQTDHIHKLKEKVKTPEDVPRLFDLVRVKDERMKLAFYAAL 655
Query: 569 GNTLVCDGLDEAKVLSWSGER-FR-VVTVDGILLTKAGTMT-----------------GG 609
GNT+V LD+A +++ G R FR VV +DG L K+GTM+ G
Sbjct: 656 GNTVVAKDLDQATRIAYGGNREFRRVVALDGALFEKSGTMSGGGGKARGGRMGTSIRATG 715
Query: 610 TTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSG---KISGLEKK 666
+G A ++ K ++ L +E+ + ++R+ + E+E SG +++ +++
Sbjct: 716 VSGEAVANAENELSKIVDMLNNIREKVGN------AVRQYRAAENEVSGLEMELAKSQRE 769
Query: 667 IQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEI 726
I+ E +E +LA+L + +EI R+K +LK I + +I LE+ ++
Sbjct: 770 IESLNSEHNYLEKQLASLEAASQPKTDEIDRLK----ELKKIISKEEKEIENLEKGSKQL 825
Query: 727 TDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQK------ 780
D+L + + G E + Q + + + + ++ + Q+E QK
Sbjct: 826 KDKLQTNIENAGG-----EKLKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLT 880
Query: 781 RDVESRIK---KLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSD 837
+ +E + +LE L K + +K +++ + I K+ + G KS+ +
Sbjct: 881 KGIEEATREKERLEGEKENLHVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYE 940
Query: 838 ECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVED 897
+K + E + A + + ++ N +L R++ +K I +
Sbjct: 941 NLKKSVDELKASRVDAEFKVQDMKKKYN-------ELEMREKGYKKKLNDLQIAFTKHME 993
Query: 898 PMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALI-SEIEKTAPNLKAL 956
++ D P + ++ L + +E L+ + M AL+ +++++ PNL ++
Sbjct: 994 QIQKDLVDPDKL-------QATLMDNNLNEACDLKRALE--MVALLEAQLKELNPNLDSI 1044
Query: 957 DQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQL 1016
+Y + +E +E + +E Y+ ++++R FM FN IS + +Y+ +
Sbjct: 1045 AEYRSKVELYNGRVDELNSVTQERDDTRKQYDELRKRRLDEFMAGFNTISLKLKEMYQMI 1104
Query: 1017 TRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSI 1076
T LGG A L L + DPF G+ ++ PP K ++++ LSGGEKT+++LAL+F++
Sbjct: 1105 T------LGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIANLSGGEKTLSSLALVFAL 1158
Query: 1077 HSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDS 1136
H YKP+P +++DE+DAALD NV+ V +++ ++ +DA Q I+ISL+++
Sbjct: 1159 HHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRT-------KDA------QFIIISLRNN 1205
Query: 1137 FYDKAEALVGVYR 1149
++ A+ LVG+Y+
Sbjct: 1206 MFELADRLVGIYK 1218
>sp|P41004|SMC4_SCHPO Structural maintenance of chromosomes protein 4
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut3 PE=1 SV=2
Length = 1324
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 326/1290 (25%), Positives = 581/1290 (45%), Gaps = 253/1290 (19%)
Query: 10 IHRLELENFKSYKGLQIIGPF-SDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
++ L L NFKSY G QI+GPF F++I+GPNG+GKSN++DA+ FV G R +LR +
Sbjct: 126 VYELRLTNFKSYAGTQIVGPFHPSFSSIVGPNGSGKSNVIDALLFVFGFRASKLRQSKAS 185
Query: 69 DLIY------AYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSEYRIDGRVVN 122
LI+ + D + E + Y G SEL RT + S+Y ++G +
Sbjct: 186 ALIHKSATHPSLDSCDVEITFKEVNSDFTYVDG--SELTVRRTAYKNNTSKYFVNGVESS 243
Query: 123 WDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELT----ALLE------------- 165
+ + L+ GI + + FL+ QG+VESIA P+ ++ LLE
Sbjct: 244 FSAVSNLLKEKGIDLNHKRFLILQGEVESIAQMKPRAISEGDDGLLEYLEDIIGTSKYKP 303
Query: 166 -------QISGSDELKREYE----VLEDEKGKAEE--KSALVY------------QKKRT 200
++S SD++ E E ++ EK K E+ S L + Q RT
Sbjct: 304 IIEENMQELSNSDDICAEKESRLKLVLSEKAKLEDSKNSVLSFLKDENELFMKQNQLYRT 363
Query: 201 VVLERKQKKEQKEEAERHLRLQDQLKSL--KKEHFLWQLFNIEKDIT-----------KA 247
++ E + KK +Q+ L SL K + L + E+DI+ KA
Sbjct: 364 ILYETRNKKT---------LVQNLLNSLEGKLQAHLEKFEQTERDISEKNEEVKSLREKA 414
Query: 248 SK---DLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQ 304
+K D +EK++R+ ++ E+Q + + K K I + +E N L
Sbjct: 415 AKVKNDCTSEKKTRQSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEAENSLSSHD 474
Query: 305 PELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEELNEKSR 364
+ KLN E++ ++ +++ + L+ R K LQ + ++ +EE K +
Sbjct: 475 IDSQKLNSEIADLSLRLQQEELSLDDIR----------KSLQGKTEGISNAIEE---KQK 521
Query: 365 DGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEANLQQLSN 424
A L ++ QLT QI L+ E ++L +++ + +++ +++L +L N
Sbjct: 522 AMAPALEKIN-QLTSEKQI----------LQVELDMLLNKENDLINDVESSQSSLDKLRN 570
Query: 425 REHELDAQEDQMRKRQKNILDASGGHKDELTKLKKEL-RSMQDKHRDSRQKYENLKSKIG 483
DA+E+ +NIL + +L KK++ ++++ K Y NL S
Sbjct: 571 -----DAEEN------RNILSSKLKVLSDLKGEKKDVSKNIERKKETVHNTYRNLMSNRT 619
Query: 484 EIENQLRELKADRHENERDAKLSQAVETLKRL-----FQGVHGRMTDLCRPTQKKYNLAV 538
++E L + R +E+L+RL G GR+ DL + Y++A+
Sbjct: 620 KLEEMKASLSSSRSR-------GNVLESLQRLHESDNLNGFFGRLGDLA-TIDEAYDVAI 671
Query: 539 TVAMGKFMDAVVVEDENTGKECIKAV--------------------------------LF 566
+ A ++ +VV++ TG++C+ + LF
Sbjct: 672 STACPA-LNHIVVDNIETGQKCVAFLRSNNLGRASFIILKELAQKNLARIQTPENVPRLF 730
Query: 567 ----------------AVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGT 610
+ NTLV L++A +++ R+RVVT+ G L+ K+GTMTGG
Sbjct: 731 DLLRFNDQKFAPAFYNVLQNTLVAKNLEQANRIAYGKTRWRVVTLSGQLIDKSGTMTGGG 790
Query: 611 T----GGMEAR--------SKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSG 658
T GGM + S + DK+++ + Q+ SELE L R +E S
Sbjct: 791 TRVKKGGMSSAITSDVSPASVETCDKQVQLEDTRYRQHLSELESLNQ------RFTEISE 844
Query: 659 KISGLEKKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINK 718
+I E +I +++ + + +A +E+R I ++K DL+ +++ +R+ NK
Sbjct: 845 RIPSAELEISKLQLDVSACDRLVAG--EERR-----ILQLKSDLKSIRNNNERKRNLQNK 897
Query: 719 LERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYE 778
+ E+ E++ + N E ++K Q+ E + ++ K K +E
Sbjct: 898 ISNMDKEV---------EAININN--EGLVTEIKTLQDKIMEIGGIRYRIQKSKVDDLHE 946
Query: 779 QKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDE 838
Q + V+ ++ K+ E + + + ++ S +T T I K E++ DE
Sbjct: 947 QLKFVKDKLNKMSFKKKKNEQRSQSFQVELSNLTSEYDTTTESIATLKTELQSLNKYVDE 1006
Query: 839 CEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDP 898
+ ++E+E +S+ +L + I E + +Q+ S K E+ ELE +
Sbjct: 1007 HKSRLREFENALWDINSSIDELVKFI---EFESKQMNSVK---AERIELENQIQEQRTAL 1060
Query: 899 METDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKT--APNLKAL 956
E ++ + S L L E ++ ++ F + + +S ++K+ N+ L
Sbjct: 1061 SEVGNNENKYLKLMSNLKLHNLTEF--CDQTTMDSTFPEYSEDELSSVDKSELVSNISVL 1118
Query: 957 DQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGL--------------FMEAF 1002
+ E + V E+ KE ++ Y S QKR L FM F
Sbjct: 1119 KKKTEDREVDINVLSEYRRCNKEAEKRDSDYQSELQKRTDLKKVVTDLQSQRLDEFMYGF 1178
Query: 1003 NHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSG 1062
IS + +Y+ +T +GG A L L + DPF G+ ++ MPP K ++++ LSG
Sbjct: 1179 GIISMKLKEMYQIIT------MGGNAELELVDSLDPFSEGVLFSVMPPKKSWKNISNLSG 1232
Query: 1063 GEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADE 1122
GEKT+++LAL+F++H+YKP+P +++DE+DAALD NV+ VA +I+ ++
Sbjct: 1233 GEKTLSSLALVFALHNYKPTPLYVMDEIDAALDFKNVSIVANYIKERTKNA--------- 1283
Query: 1123 GNGFQSIVISLKDSFYDKAEALVGVYRDSD 1152
Q IVISL+ + ++ + LVG+Y+ ++
Sbjct: 1284 ----QFIVISLRSNMFELSSRLVGIYKTAN 1309
>sp|Q8CG47|SMC4_MOUSE Structural maintenance of chromosomes protein 4 OS=Mus musculus
GN=Smc4 PE=1 SV=1
Length = 1286
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 289/1252 (23%), Positives = 568/1252 (45%), Gaps = 192/1252 (15%)
Query: 16 ENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLKDLIYAY 74
+NFKSY G +++GPF F+ IIGPNG+GKSN++D++ FV G R ++R +L LI+
Sbjct: 88 QNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNS 147
Query: 75 DDKEKEQKG--RRAFVRLV------YQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEY 126
D+ + Q F +++ Y++ S +RT S Y I G+ + +
Sbjct: 148 DEHKDIQSCTVEVHFQKIIDKEGDDYEVLPNSNFYVSRTAYRDSTSVYHISGKKKTFKDV 207
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTA-------LLEQISGSDELK----- 174
LRS GI + FL+ QG+VE IA PK T LE I G L
Sbjct: 208 GNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKV 267
Query: 175 --REYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEH 232
R E+L + +G+ + +V ++K + + +K A L L++++ KK H
Sbjct: 268 LCRRVEILNEHRGEKLNRVKMVEKEKDAL-------EGEKNIAIEFLTLENEMFK-KKNH 319
Query: 233 FL-WQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEK 291
+ +++++ I + + E +E+ + ++ + K + K++ + K
Sbjct: 320 ICQYYIYDLQNRIAEITTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKVTK 379
Query: 292 KIAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQD 351
I + + + E +++ E++ SK K +K+L++ +E+ ++EL K +
Sbjct: 380 FIEQNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEK-------VEEL-KSVPA 431
Query: 352 LTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDRE------- 404
+ + +NE + + + + ++ + +T L+ EKE+ ++E
Sbjct: 432 KSKTV--INETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQKEKEIQEKELMGFNKS 489
Query: 405 ----------QHADLEV-LKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDE 453
++L++ L + QLS + L + +++R+ I D + +
Sbjct: 490 VNEARSKMEVAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIKDINT----K 545
Query: 454 LTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETLK 513
L + ++EL+ + + + Q+ NLKS + ++ ++ E K+ N K+ A+ K
Sbjct: 546 LPQTQQELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEK 605
Query: 514 RL--FQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI---------- 561
+ G++GR+ DL +KY++A++ + +D +VV+ +T +EC+
Sbjct: 606 KSGRIPGIYGRLGDLG-AIDEKYDIAIS-SCCHALDYIVVDSIDTAQECVNFLKKHNIGI 663
Query: 562 ----------------------------------------KAVLFAVGNTLVCDGLDEAK 581
+A FA+ +TLV + LD+A
Sbjct: 664 ATFIGLDKMTVWAKKMSKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLDQAT 723
Query: 582 VLSWSGER-FRVVTVDGILLTKAGTMTGGTTGGMEAR--SKQWDDKKIEGLKRKKEQYES 638
+++ +R +RVVT+ G ++ ++GTM+GG + M R S D+ +E + + + Q E
Sbjct: 724 RVAYQRDRRWRVVTLQGQIIEQSGTMSGGGSKVMRGRMGSSVIDEISVEEVNKMESQLER 783
Query: 639 ELEELGSIRE---------MQLRESE---------TSGKISGLEKKIQYAEIEKRSIEDK 680
++ I+E ++LR SE + I GL ++ +Y ++ + +E
Sbjct: 784 HSKQAMQIQEQKVQHEEAVVKLRHSERDMRNTLEKFAASIQGLSEQEEYLCVQIKELEAN 843
Query: 681 L---ANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSES 737
+ A R++++ ++E + K + + +K + +I +L I +I +R +
Sbjct: 844 VLTTAPDRKQQKLLEENVSVFKKEYDAVAEKAGKVEAEIKRLHNTIIDINNRKLKAQQNK 903
Query: 738 VGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKLESSLSTL 797
+ N ++ +E A + + ++ + LK + + E IK E ++ L
Sbjct: 904 LDTIN-KQLDE----CASAITKAQVAIKTADRNLKKAQDSVCR--TEKEIKDTEKEINDL 956
Query: 798 ENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSL 857
+ +LK ++ K +V + T+TA + ++E R ++ +K A + L
Sbjct: 957 KTELKNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQELKVIQENEHALQKDALSIKLKL 1016
Query: 858 SKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQLNR 917
+++ I+ ++I+ + E+ I L VED PV + L++
Sbjct: 1017 EQIDGHISEHNSKIKYW---------QKEISKIKLHPVED---------NPVETVAVLSQ 1058
Query: 918 SYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAAR 977
L+ + E E+ L ++ + PNL A+ +Y+ + E +
Sbjct: 1059 EELEAIKNPESITNEIAL------LEAQCREMKPNLGAIAEYKKKEDLYLQRVAELDKIT 1112
Query: 978 KEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDD 1037
E AY ++++R FM F I++ + Y+ LT LGG A L L + D
Sbjct: 1113 SERDNFRQAYEDLRKQRLNEFMAGFYVITNKLKENYQMLT------LGGDAELELVDSLD 1166
Query: 1038 PFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNL 1097
PF GI ++ PP K ++ + LSGGEKT+++LAL+F++H YKP+P + +DE+DAALD
Sbjct: 1167 PFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFK 1226
Query: 1098 NVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYR 1149
NV+ VA +I ++ Q I+ISL+++ ++ ++ L+G+Y+
Sbjct: 1227 NVSIVAFYIYEQT-------------KNAQFIIISLRNNMFEISDRLIGIYK 1265
>sp|Q8TZY2|SMC_PYRFU Chromosome partition protein Smc OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=smc PE=1 SV=2
Length = 1177
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 337/1257 (26%), Positives = 575/1257 (45%), Gaps = 236/1257 (18%)
Query: 10 IHRLELENFKSYKGLQIIGPFS-DFTAIIGPNGAGKSNLMDAISFVLG-VRTGQLRGGQL 67
I +LEL+ FKSY +++ PFS FTAI+G NG+GKSN+ DAI FVLG + +R ++
Sbjct: 4 IEKLELKGFKSYGNKKVVIPFSKGFTAIVGANGSGKSNIGDAILFVLGGLSAKAMRASRI 63
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQLGNES--------ELQFTRTITSSGGSEYRIDGR 119
DLI+A E K + + NE E+ R + G S Y ++GR
Sbjct: 64 SDLIFAGSKNEPPAK----YAEVAIYFNNEDRGFPIDEDEVVIRRRVYPDGRSSYWLNGR 119
Query: 120 VVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEV 179
E L + I N +V QGD+ +P E L++ ISG E + E
Sbjct: 120 RATRSEILDILTAAMISPDGYN-IVLQGDITKFIKMSPLERRLLIDDISGIAEYDSKKEK 178
Query: 180 LEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFN 239
+E +AEE A V + V + + ++++ +A R+L L+D+L+ K L ++
Sbjct: 179 ALEELKQAEENLARVDLLIKEVKKQLDKLEKERNDALRYLDLKDKLEKAKVSLLLGEIKI 238
Query: 240 IEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYL--------KEIAQCEK 291
+E I + K + +++ +E+E + K K L + +E Q K
Sbjct: 239 LETQIKEGEKRRAEIEEEIQKIEKEIEKIGKEIVEKVKVLREIEERIEKESGEEAIQITK 298
Query: 292 KIAERNNR--------------LDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRK 337
KI E ++ L+ +Q L K EE+ ++ S+I+ SK + R ++ R
Sbjct: 299 KIGEVTSKIELTKRNIEVAKEELEDAQRRLAKTKEELRKVLSEIEKSKGAITRWKKRRDA 358
Query: 338 HANDIKELQKGIQDLTGKLEELNEKSRDGAGR--LPLLDTQLTEYFQIKEEAGMKTAKLR 395
N+IK+ ++ L KL E+++ GA R + +L E + E +L+
Sbjct: 359 LINEIKKKEEERNVLVVKLGEIDKTF--GAAREEFDSVVKELEETTRKMYEIEGNIRRLQ 416
Query: 396 DEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELT 455
+EKE L H+ + L+ A L + + +E A + R E++
Sbjct: 417 EEKEKL----HSRILFLR---AKLPGIKEKINEFKAVVEDKRA--------------EIS 455
Query: 456 KLKKELRSMQDKH----RDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVET 511
+++ +L ++Q K ++ K L+ E+E+ REL A E +R+ + ++A E
Sbjct: 456 EIEGKLSTIQAKRIKVEKEIEAKSNELEKVSKELESSERELIA--AEAQREVRGNRAAEE 513
Query: 512 LKRL-FQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECIK-------- 562
LKR G++G + +L + + Y LA+ VA+G D VVVEDE ++ IK
Sbjct: 514 LKRSGIGGIYGTLAELIKVKDEAYALAIEVALGNRADNVVVEDELVAEKAIKYLKEHKLG 573
Query: 563 -----------------------------------AVLFAVGNTLVCDGLDEAKVLSWSG 587
AV FA+G+T++ + ++EA+ G
Sbjct: 574 RLTFLPLNKIKPKHVDSSVGLPAVDVIEYDQKIENAVKFALGDTVIVNSMEEAR--PHIG 631
Query: 588 ERFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDD----KKIEGLKRKKEQYESELEEL 643
+ R+VT++G L ++G +TGG AR D +K+E L+R+KE E EL L
Sbjct: 632 -KVRMVTIEGELYERSGAITGGH---FRARGLAVDTTKLREKVESLRRRKEALEGELNSL 687
Query: 644 GSIREMQLRESETSGKISGLEKKIQYAEIEKRSIE---DKLANLRQEKRTIKEEIGRIKP 700
+++LR E + E +I+ ++ EK+ +E L L +E+ +KEEI +
Sbjct: 688 ----KIELRSLENAS----FELRIKLSD-EKKELELASKDLNRLLEEENAVKEEIEESER 738
Query: 701 DLQKLKDKIDRRTTDINKLERRINE-----------ITDRLYRDFSESVGVANIREYEEN 749
+Q+++ KI+ +++ KL RI + + R+ E + I + E +
Sbjct: 739 KIQEIEQKIENEKSELAKLRGRIQRLERKKEKLKKALENPEARELMEKI---RIIDGEIS 795
Query: 750 QLKAAQNVAEERL-----NLSNQLAKLKYQLEYEQKRDVESRIKKLESSLSTLENDLKQV 804
LK + E R+ L+ +L K LE E+ + ++I L++++S E L+ +
Sbjct: 796 SLKEELSRIESRIESLESRLNEELLPRKASLE-EEIEGLVNKINALKNNISENEKALELL 854
Query: 805 KKKEGDVKSATETATGDI-------TRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSL 857
K+ +KS E G+I + +E++ + + ++++QE E +A+
Sbjct: 855 NKELEKLKSIEENIKGEIRTLREKRKKLEEDISKLREKKEVLQRKLQELEIEANTLKVRD 914
Query: 858 SKLNRQINSKEAQI----EQLISRKQEIMEKCELECIVLPTVEDPMETDSSSP---GPVF 910
++LN Q+ K+ Q+ + LI +EI +LE + + E S P +
Sbjct: 915 AQLNAQLEEKKYQLTHYDKNLIKSIKEI--PLDLEKVKKEIEKMEEEIRSLEPVNMKAIE 972
Query: 911 DFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVT 970
DF + R YL+ + S+REKLE EKE +
Sbjct: 973 DFEIVERRYLELK--SKREKLEA------------------------------EKESII- 999
Query: 971 EEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYL 1030
EF N +++++ +FM F IS + I+ +L+ P GG+A L
Sbjct: 1000 -EF-------------INEIEKEKKNVFMRTFEAISRNFSEIFAKLS-----P-GGSARL 1039
Query: 1031 NLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEV 1090
LEN +DPF G++ A P K + +E +SGGEK + ALA +F+I +KP+PF++ DE+
Sbjct: 1040 ILENPEDPFSGGLEIEAKPAGKDVKRIEAMSGGEKALTALAFVFAIQKFKPAPFYLFDEI 1099
Query: 1091 DAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
DA LD+ NV +VA I+ S E Q IVI+L+D A+ ++GV
Sbjct: 1100 DAHLDDANVKRVADLIKESSKES-------------QFIVITLRDVMMANADKIIGV 1143
>sp|P50532|SMC4_XENLA Structural maintenance of chromosomes protein 4 OS=Xenopus laevis
GN=smc4 PE=1 SV=1
Length = 1290
Score = 248 bits (632), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 322/1292 (24%), Positives = 573/1292 (44%), Gaps = 272/1292 (21%)
Query: 16 ENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLKDLIYAY 74
+NFKSY G +I+GPF F+ IIGPNG+GKSN++D++ FV G R ++R +L LI+
Sbjct: 84 QNFKSYAGERILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNS 143
Query: 75 DDKEKEQKG--RRAFVRLVYQLGNE------SELQFTRTITSSGGSEYRIDGRVVNWDEY 126
D+ + Q F +++ + G++ S +RT S Y I G+ + +
Sbjct: 144 DEHKDVQSCTVEVHFQKIIDKEGDDFEVIPNSNFYVSRTAYKDNSSVYHISGKKATFKDV 203
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTA-------LLEQISGSDELK----- 174
LRS GI + FL+ QG+VE IA PK T LE I GS+ LK
Sbjct: 204 GLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSERLKEPIQI 263
Query: 175 --REYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEH 232
R E+L +++G+ + +V ++K + + +K +A L ++++ + KK++
Sbjct: 264 LCRRVELLNEQRGEKLNRVKMVEKEKDAL-------EGEKNKAIEFLTVENE--TFKKKN 314
Query: 233 FLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKK 292
L Q + D+ K S+D EA+K +E +++ + KE K LK++ + K
Sbjct: 315 QLCQYYI--HDLQKRSRDKEAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNK 372
Query: 293 IAE--RNNRLDKSQPELLKLN--EEMSRINSKIKSSKKELERKREERRKHANDIKELQKG 348
I + NR +Q +L ++ E++ SK+K +K+L++ +E+ + N QK
Sbjct: 373 ITKFIEENREKFTQLDLQDVDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNVPANSQKI 432
Query: 349 IQDLTGK------------------LEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMK 390
I + T K ++ L ++++ + + +L E + EA K
Sbjct: 433 IAEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQEEKEVKEKELMEISKTVNEARSK 492
Query: 391 TAKLRDEKEV-LDREQHADLEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGG 449
+ E ++ L R A L QL+ + L+ +++R+ I
Sbjct: 493 MDVAQSELDIYLSRHNSA-----------LSQLNKAKEALNTASATLKERRAAI------ 535
Query: 450 HKDELTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHE-------NERD 502
K+ TKL K+ ++ + ++ E+L S+ G I+NQ+REL+ E N
Sbjct: 536 -KELETKLPKDEGDLKKREKE----LESLVSEEGNIKNQVRELRQKVEEARSSLSANRSR 590
Query: 503 AKLSQAVETLKRL--FQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKEC 560
K+ A+ K+ G+ GR+ DL +KY++A++ + G +D +VV+ +T +EC
Sbjct: 591 GKVLDALIQQKKSGKIPGIFGRLGDLG-AIDEKYDVAISSSCGA-LDHIVVDTIDTAQEC 648
Query: 561 IK--------------------------------------------------AVLFAVGN 570
+ A FA+ +
Sbjct: 649 VNFLKKQNVGVATFIGLDKMKVWEKGLNKIQTPENIPRLFDMVKVKDEQIKPAFYFALRD 708
Query: 571 TLVCDGLDEAKVLSWSGE-RFRVVTVDGILLTKAGTMTGGTTGGMEARSK---------- 619
T+V + LD+A +++ + R+RVVT+ G ++ ++GTMTGG M+ R
Sbjct: 709 TIVANNLDQATRVAFQKDKRWRVVTLQGQIIEQSGTMTGGGGKVMKGRMGSSVMVEISDD 768
Query: 620 ---------QWDDKKIEGLKRKKEQYESELEEL---------------GSIREMQLRESE 655
+ D + ++ +K E E+ +L S++ + +E
Sbjct: 769 QLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASLQSLSEQEVH 828
Query: 656 TSGKISGLEKKIQYAEIEK---RSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRR 712
++ LE + A +K + +E L L++E + E+ G+++ ++++L I
Sbjct: 829 LKAQVKELEVNVAAAAPDKNQQKQMEKNLETLKKEYEKVAEKAGKVEAEVKRLHKLI--- 885
Query: 713 TTDIN--KLERRINEITDRLYRDFSESVGV-----ANIREYEENQLKAAQNVAEERLNLS 765
DIN KL+ + +++ D++ ++ E +I+ + N K+ + VA
Sbjct: 886 -VDINNHKLKAQQDKL-DKVTKEIDECASAITKAQVSIKTADRNLKKSEEAVAR------ 937
Query: 766 NQLAKLKYQLEYEQKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRW 825
E I + S+ L DLK++++K V + + A +
Sbjct: 938 -----------------TEKEIVANDKSIEELTEDLKKLEEKATTVMNECKEAECSLPEV 980
Query: 826 KEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKC 885
+E+ R K IQE E ++ QI+S A+ + I Q+
Sbjct: 981 QEQHRSLLQEI----KAIQEKEHALQKEALNIRLNIEQIDSHIAEHQSKIKYWQK----- 1031
Query: 886 ELECIVLPTVED-PMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALIS 944
E+ I L +ED P E PG QE E+E + D +I+
Sbjct: 1032 EITKISLHKIEDIPEEV---LPG-----------LAQE---------ELEAIKDPDQIIN 1068
Query: 945 EI-------EKTAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGL 997
+I + PNL A+ +Y+ E E + E AY ++++R
Sbjct: 1069 QIALLEAKSHEMKPNLGAIAEYKKKEELYLQRVAELDEITNERDSFRRAYEDLRKQRLNE 1128
Query: 998 FMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDM 1057
FM FN I++ + Y+ LT LGG A L L + DPF GI ++ PP K ++ +
Sbjct: 1129 FMAGFNIITNKLKENYQMLT------LGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKI 1182
Query: 1058 EQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGN 1117
LSGGEKT+++LAL+F++H YKP+P + +DE+DAALD NV+ VA +I ++
Sbjct: 1183 FNLSGGEKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQT------- 1235
Query: 1118 QDADEGNGFQSIVISLKDSFYDKAEALVGVYR 1149
Q I+ISL+++ ++ A+ L+G+Y+
Sbjct: 1236 ------KNAQFIIISLRNNMFEIADRLIGIYK 1261
>sp|Q9ERA5|SMC4_MICAR Structural maintenance of chromosomes protein 4 (Fragment)
OS=Microtus arvalis GN=SMC4 PE=2 SV=1
Length = 1243
Score = 242 bits (617), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 298/1268 (23%), Positives = 553/1268 (43%), Gaps = 224/1268 (17%)
Query: 16 ENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLKDLIYAY 74
+NFKS G +I+GPF F+ IIGPNG+GKSN++D++ FV G R ++R +L LI+
Sbjct: 45 QNFKSCAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNS 104
Query: 75 DDKEKEQKG--RRAFVRLV------YQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEY 126
D+ + Q F +++ Y++ S +RT S Y I G+ + +
Sbjct: 105 DEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFCVSRTAYRDNTSVYHISGKKRTFKDV 164
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTA-------LLEQISGSDELK----- 174
LRS GI + FL+ QG+VE IA PK T LE I G L
Sbjct: 165 GNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKV 224
Query: 175 --REYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEH 232
R E+L + +G+ + +V ++K V + +K A L L+ ++ K
Sbjct: 225 LCRRVEILNENRGEKLNRVKMVEKEKDAV-------EGEKNIAIEFLTLEKEMFKKKNHV 277
Query: 233 FLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKK 292
+ +++++K I + E +E+ + ++ + K + K++ + K
Sbjct: 278 CQYYIYDLQKRIDEMKTQKEKIHEDTKEITEKSNMLSNEMKAKNSAVKDIEKKLHKATKF 337
Query: 293 IAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDL 352
I E + + E +++ E++ SK K +K+L++ +E+ ++K + + +
Sbjct: 338 IEENKEKFRQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEK----VEELKSIPAKSKTI 393
Query: 353 TGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLD-----REQHA 407
+ + + ++ + + +E G++ K EKE++ E +
Sbjct: 394 INETTTKSSSLEKEKEKEEKKLKEVMDSLK-QETQGLQKEKEDQEKELMGFNKSVNEARS 452
Query: 408 DLEV--------LKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKK 459
+EV L + QLS + L + +++R+ I G +L + ++
Sbjct: 453 KMEVAQSELDIYLSRHNTAVSQLSKAKETLITASETLKERKAAI----GEINTKLPQTQQ 508
Query: 460 ELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETLKRL--FQ 517
EL+ + + + Q+ NLKS + ++ ++ E K+ N K+ A+ K+
Sbjct: 509 ELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRIP 568
Query: 518 GVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI---------------- 561
G++GR+ DL +KY++A++ + +D +VV+ +T +EC+
Sbjct: 569 GIYGRLGDLG-AIDEKYDIAIS-SCCHALDYIVVDSIDTAQECVNFLKRHNIGVATFIGL 626
Query: 562 ----------------------------------KAVLFAVGNTLVCDGLDEAKVLSWSG 587
+A FA+ +TLV D LD+A +++
Sbjct: 627 DKMTVWAKKMAKIQTPENTPRLFDLVKAKNEEIRQAFYFALRDTLVADNLDQATRVAYQK 686
Query: 588 ER-FRVVTVDGILLTKAGTMTGGTTGGMEARSK-------------------QWDDKKIE 627
+R +RVVT+ G ++ ++GTMTGG + M R Q K+
Sbjct: 687 DRRWRVVTLQGQIIEQSGTMTGGGSKVMRGRMGSSVIVEISEEEVNKMESQLQKHSKQAR 746
Query: 628 GLKRKKEQYESELEEL-GSIREMQLRESETSGKISGLEKKIQYAEIE------------- 673
++ +K Q+E + +L S REM+ + + I GL + +Y ++
Sbjct: 747 RIQEQKVQHEERVVKLRHSEREMRNTLEKFAASIQGLSDQEEYLTVQIKELEANVLTTAP 806
Query: 674 ----KRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDIN--KLERRINEIT 727
++ +E+ ++ ++E + E+ G+++ ++++L D I +IN KL+ + N++
Sbjct: 807 DKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDTI----IEINNRKLKAQQNKL- 861
Query: 728 DRLYRDFSESVGVAN-----IREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRD 782
D + + E I+ + N +KA +V
Sbjct: 862 DMINKQLDECASAITKAQVAIKTADRNLIKAQDSVVR----------------------- 898
Query: 783 VESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKE 842
E IK E + L+ +LK ++ K +V T A + ++E R N + K
Sbjct: 899 TEKEIKDTEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPEIQKEHR----NLLQELKV 954
Query: 843 IQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETD 902
IQE E S+ QI+ A+ I Q+ + K +L P ++P+ET
Sbjct: 955 IQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYWQKEISKIKLH----PIEDNPVETV 1010
Query: 903 SS-SPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEA 961
S SP D + + P ++ L ++ + PNL A+ +Y+
Sbjct: 1011 SVLSPE---DLEAI-------KNPDS-------ITNQIAILEAQCHEMKPNLGAIAEYKK 1053
Query: 962 LLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNT 1021
E E + E AY ++++R FM F I++ + Y+ LT
Sbjct: 1054 KEELYLQRVAELDKITSERDNFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLT---- 1109
Query: 1022 HPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKP 1081
LGG A L L + DPF GI ++ PP K ++ + LSGGEKT+++LAL+F++H YKP
Sbjct: 1110 --LGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHHYKP 1167
Query: 1082 SPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKA 1141
+P + +DE+DAALD NV+ VA +I ++ Q I+ISL+++ ++ +
Sbjct: 1168 TPLYFMDEIDAALDFKNVSIVAFYIYEQT-------------KNAQFIIISLRNNMFEIS 1214
Query: 1142 EALVGVYR 1149
+ L+G+Y+
Sbjct: 1215 DRLIGIYK 1222
>sp|Q9NTJ3|SMC4_HUMAN Structural maintenance of chromosomes protein 4 OS=Homo sapiens
GN=SMC4 PE=1 SV=2
Length = 1288
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 291/1271 (22%), Positives = 556/1271 (43%), Gaps = 230/1271 (18%)
Query: 16 ENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLKDLIYAY 74
+NFKSY G +I+GPF F+ IIGPNG+GKSN++D++ FV G R ++R +L LI+
Sbjct: 90 QNFKSYAGEKILGPFHKRFSCIIGPNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHNS 149
Query: 75 DDKEKEQKG--RRAFVRLV------YQLGNESELQFTRTITSSGGSEYRIDGRVVNWDEY 126
D+ + Q F +++ Y++ S +RT S Y I G+ + +
Sbjct: 150 DEHKDIQSCTVEVHFQKIIDKEGDDYEVIPNSNFYVSRTACRDNTSVYHISGKKKTFKDV 209
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTA-------LLEQISGSDELK----- 174
LRS GI + FL+ QG+VE IA PK T LE I G L
Sbjct: 210 GNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGCGRLNEPIKV 269
Query: 175 --REYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEH 232
R E+L + +G+ + +V ++K + + +K A L L++++ K
Sbjct: 270 LCRRVEILNEHRGEKLNRVKMVEKEKDAL-------EGEKNIAIEFLTLENEIFRKKNHV 322
Query: 233 FLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKK 292
+ ++ ++K I + E +E+ + ++ + K K++ K++ + K
Sbjct: 323 CQYYIYELQKRIAEMETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKKLNKITKF 382
Query: 293 IAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDL 352
I E + + E +++ E++ SK K +K+L++ +E+ + K + ++
Sbjct: 383 IEENKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEK----VEEFKSIPAKSNNI 438
Query: 353 TGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLD-----REQHA 407
+ N + ++ + + +E G++ K EKE++ E +
Sbjct: 439 INETTTRNNALEKEKEKEEKKLKEVMDSLK-QETQGLQKEKESREKELMGFSKSVNEARS 497
Query: 408 DLEV--------LKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKK 459
++V L + QL+ + L A + +++R+ I D G +L + ++
Sbjct: 498 KMDVAQSELDIYLSRHNTAVSQLTKAKEALIAASETLKERKAAIRDIEG----KLPQTEQ 553
Query: 460 ELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETLKRL--FQ 517
EL+ + + + Q+ N KS + ++ ++ E K+ N K+ A+ K+
Sbjct: 554 ELKEKEKELQKLTQEETNFKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRIP 613
Query: 518 GVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI---------------- 561
G++GR+ DL +KY++A++ + +D +VV+ + +EC+
Sbjct: 614 GIYGRLGDLG-AIDEKYDVAIS-SCCHALDYIVVDSIDIAQECVNFLKRQNIGVATFIGL 671
Query: 562 ----------------------------------KAVLFAVGNTLVCDGLDEAKVLSWSG 587
+A FA+ +TLV D LD+A +++
Sbjct: 672 DKMAVWAKKMTEIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQK 731
Query: 588 ER-FRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSI 646
+R +RVVT+ G ++ ++GTMTGG + M+ R +GS
Sbjct: 732 DRRWRVVTLQGQIIEQSGTMTGGGSKVMKGR-------------------------MGSS 766
Query: 647 REMQLRESETSGKISGLE---KKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQ 703
+++ E E + S L+ KK + +K +E+++ LR +R ++ + + +Q
Sbjct: 767 LVIEISEEEVNKMESQLQNDSKKAMQIQEQKVQLEERVVKLRHSEREMRNTLEKFTASIQ 826
Query: 704 KLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLN 763
+L ++ E +N ++E E N L A + +++L
Sbjct: 827 RLIEQ-----------EEYLN----------------VQVKELEANVLATAPDKKKQKLL 859
Query: 764 LSNQLA-KLKYQLEYEQKRDVESRIKKLESSLSTLEND--------LKQVKKKEGDVKSA 814
N A K +Y E+ VE+ +K+L +++ + N L ++ K+ + SA
Sbjct: 860 EENVSAFKTEYDAVAEKAGKVEAEVKRLHNTIVEINNHKLKAQQDKLDKINKQLDECASA 919
Query: 815 TETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLN-------RQINSK 867
A I ++ + + EKEI++ EK+ T L L + N+
Sbjct: 920 ITKAQVAIKTADRNLQKAQDSVLRTEKEIKDTEKEVDDLTAELKSLEDKAAEVVKNTNAA 979
Query: 868 EAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSS--------PGPVFDFSQLNRSY 919
E + ++ + +++ E V+ E ++ D+ S G + + + + +
Sbjct: 980 EESLPEIQKEHRNLLQ----ELKVIQENEHALQKDALSIKLKLEQIDGHIAEHNSKIKYW 1035
Query: 920 LQE-----RRPSEREKLE---------VEFKQKMDALISEI-------EKTAPNLKALDQ 958
+E P E +E +E + D++ ++I + PNL A+ +
Sbjct: 1036 HKEISKISLHPIEDNPIEEISVLSPEDLEAIKNPDSITNQIALLEARCHEMKPNLGAIAE 1095
Query: 959 YEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTR 1018
Y+ E E + E AY ++++R FM F I++ + Y+ LT
Sbjct: 1096 YKKKEELYLQRVAELDKITYERDSFRQAYEDLRKQRLNEFMAGFYIITNKLKENYQMLT- 1154
Query: 1019 SNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHS 1078
LGG A L L + DPF GI ++ PP K ++ + LSGGEKT+++LAL+F++H
Sbjct: 1155 -----LGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFALHH 1209
Query: 1079 YKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFY 1138
YKP+P + +DE+DAALD NV+ VA +I ++ Q I+ISL+++ +
Sbjct: 1210 YKPTPLYFMDEIDAALDFKNVSIVAFYIYEQT-------------KNAQFIIISLRNNMF 1256
Query: 1139 DKAEALVGVYR 1149
+ ++ L+G+Y+
Sbjct: 1257 EISDRLIGIYK 1267
>sp|Q20060|SMC4_CAEEL Structural maintenance of chromosomes protein 4 OS=Caenorhabditis
elegans GN=smc-4 PE=1 SV=1
Length = 1549
Score = 219 bits (559), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 313/1321 (23%), Positives = 575/1321 (43%), Gaps = 239/1321 (18%)
Query: 10 IHRLELENFKSYKGLQIIGPFS-DFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I +E++NFKSY G IGPF FT+IIGPNG+GKSNL+D++ FV G R ++R ++
Sbjct: 92 IRNVEVDNFKSYFGKASIGPFHKSFTSIIGPNGSGKSNLIDSLLFVFGFRASKIRSAKVS 151
Query: 69 DLIYAYDDKEKEQKGRRA-FVRLV-----YQLGNESELQFTRTITSSGGSEYRIDGRVVN 122
+LI+ + ++ F R+V Y++ +SE +RT + S Y IDGR
Sbjct: 152 NLIHKSAGRNPDKCTVTIHFQRIVDIPGHYEVVKDSEFTISRTAFQNNSSSYAIDGRPAT 211
Query: 123 WDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLED 182
+E A+LR + I ++ FL+ QG+VE IA +++ + + E LED
Sbjct: 212 KNEVEARLRRVDIDIEHNRFLILQGEVEQIA---------MMKPVKTTKSETGMVEYLED 262
Query: 183 EKG--KAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNI 240
G + E L ++ + + Q++ ++ A R+ ++ + FL +
Sbjct: 263 IIGTNRLEPFVKLFQRRVNRLTCDLSQQRIARDHA-RNSKVAMENPVRAAIEFLMK---- 317
Query: 241 EKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRL 300
E + T LE +R R + D+ K+ EL K +E+ + + N
Sbjct: 318 ENEATTIHMKLEQRRRQR---------YLDKIAPKQAELDKMKEEMKSIAETLDTNKNEY 368
Query: 301 DKSQPELLKLNEEMSRINSKIKSSKKELE-------RKREERRKHANDIKELQKGIQDLT 353
+S+ + EE S+++ S KEL R++E ++H +I + + +
Sbjct: 369 KQSEEAQKVMIEERSKLDKNFDSLSKELSDLGTEETRRKEALKRHQANISKAEAEKEKEV 428
Query: 354 GKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLK 413
K L ++ ++ + +I++ A + K DE ++ A E K
Sbjct: 429 KKRSNLEAAPEKAERKIAKCQEEVEQLLEIEKTANEEADKNLDE---FEKRSEAPKEEQK 485
Query: 414 NLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQ 473
++ Q SN +++ + R+ +++ + D+L +LKK L S ++ + +
Sbjct: 486 KIQETWAQKSNEFNKVRGEARIAREDFEDLKKLANSGTDKLIELKKRLESSEESYAKEKD 545
Query: 474 KYENLKSKIGEIENQLRELKAD--------RHENERDAKLSQAVETLK----------RL 515
+ + LK + ++L++L + R +N+ AK +ETL+ ++
Sbjct: 546 ELDKLKPEFDSWNDKLKQLSTELPTLRNTARQKNQDLAKTRDRLETLRQQNSSCSSSNKV 605
Query: 516 FQGV------------HGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECIKA 563
Q + HGR+ DL KY A+ G ++ ++V E K I
Sbjct: 606 IQALMKEKEAGRIKSFHGRLGDLGV-IDPKYEGAICTNFGARLNYLIVGKEEDAKNVIN- 663
Query: 564 VLFAVGNTLV-----------CDGLDEAK-------------------VL---------- 583
F V N L CD D A VL
Sbjct: 664 --FLVANKLPRQTVQPLDKIKCDKRDLAPNPTNPLPAPRLIDLIDCDPVLKPAFYDMVRS 721
Query: 584 ------SWSGERFR---------VVTVDGILLTKAGTMTGG--TTGGM-------EARSK 619
+ +R V T++G ++ +G+ TGG T G+ A+
Sbjct: 722 AIVGDSTQEAQRMHRMPACRGVTVCTLEGSMIHPSGSFTGGGKTVKGLILTDKNKMAKQV 781
Query: 620 QWDDKKIE-GLKRKKEQYESELEEL--------GSIREMQLRESETSGKISGLEKKIQYA 670
+DK E L K + E +EL G + E + + +E S ++S + +Q A
Sbjct: 782 TPEDKAAERDLAEKLGKLRDEADELKGQEHEMDGQLIEARRKVAEMSNRLSIVTSSVQSA 841
Query: 671 EIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDIN----KLERRINEI 726
+++ +AN +E +K + ++ D QK+ ++++++ ++ K++ R EI
Sbjct: 842 APAIETLKKTIANQEKEAAKVKVDAKTLE-DKQKIVEELEKKRDELGEEAAKVKARQAEI 900
Query: 727 TDRLYRDFSESVGVAN--IREYEENQLKAAQNVAEERLNLSN---QLAKLKYQLEYEQKR 781
+L F E V +E + + K +++A+E N+SN +AK + K
Sbjct: 901 QSKLDGIFKELVQCHRDEAKESLQKRQKLEKDIAKETANISNSGRNIAKCDENISRHDK- 959
Query: 782 DVESRIKKLE-------------SSLSTLENDLKQVKK----------KEGDVKSATETA 818
D+E KK E S T+E KQ+KK K+ ++ +A
Sbjct: 960 DIEKMKKKCEELMEKAIDDEEVKSKKETVERFEKQIKKLQTKGEEMTKKQSELSAAETKL 1019
Query: 819 TGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAA-------------TTSLSKLNRQIN 865
G++ + E ++ K + ++++ EK+ +A ++ L QI+
Sbjct: 1020 EGELKKCSEGIKELKESMLADRLKVEDIEKKLAALKVNRIPRFQFLIESSRPEDLEMQID 1079
Query: 866 SKEAQIEQLISRKQEIMEKCELECI---------------VLPTVEDPMETDSSSPGPVF 910
K +++ S ++ +K + C+ VL E D PV
Sbjct: 1080 DKMPVVDENQSPEEVERQKKHMACVMSDAAYALEFEMRQKVLENTESYENVDGEDRVPVE 1139
Query: 911 DFSQLNRSYLQERRPSERE-KLEVEFKQKMDALISEIEKTAPNLKA-LDQYEALLEKERT 968
S + + R E + KL+V +Q+++AL ++++ ++ +KA +D+ + E+
Sbjct: 1140 LLSDEKINEISSRDAEEMQMKLKV-CEQQVEALKAKVDISS--IKAYVDKVKQYNEQVIK 1196
Query: 969 VTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTA 1028
+T E RK ++ +KQ R F AF I + ++K LT GG A
Sbjct: 1197 LTIATEVHRKHNQE----LQRIKQMRLEEFHSAFEFIGKHLVAVFKMLTD------GGDA 1246
Query: 1029 YLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILD 1088
L ++DDPF GI + P K ++ ++ LSGGEKT+++LAL+F++H ++P+PF+++D
Sbjct: 1247 KLEYIDKDDPFRQGISFMVRPAKKAWKQIQFLSGGEKTLSSLALIFALHMFRPTPFYVMD 1306
Query: 1089 EVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVY 1148
E+DAALD NV+ +A ++R K+ Q I+ISL+++ ++ A LVG+Y
Sbjct: 1307 EIDAALDYRNVSIIAQYVRQKT-------------ENAQFIIISLRNNMFELANRLVGIY 1353
Query: 1149 R 1149
+
Sbjct: 1354 K 1354
>sp|B8CW13|SMC_HALOH Chromosome partition protein Smc OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=smc PE=3 SV=1
Length = 1185
Score = 203 bits (517), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 287/1267 (22%), Positives = 556/1267 (43%), Gaps = 233/1267 (18%)
Query: 10 IHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQLK 68
+ +LEL+ FKS+ I S TAI+GPNG+GKSN++DAI +VLG ++ + LRG ++
Sbjct: 3 LKKLELKGFKSFAKPITINFESPITAIVGPNGSGKSNIVDAIRWVLGEQSAKTLRGSRMA 62
Query: 69 DLIYAYDDKEKEQKGRRAFVRLVYQLGNE--------SELQFTRTITSSGGSEYRIDGRV 120
D+I+A K+ K +Y L N+ S ++ +R + G S+Y ++G++
Sbjct: 63 DVIFA---GSKDYKALNKASVTLY-LDNQDKILPLDVSTVKISRKVNMDGQSDYYLNGKI 118
Query: 121 VNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELK-REYEV 179
+ L G L K +V QG ++SI + P++L L E+ +G + K R+ +
Sbjct: 119 CRLKDIENLLMDTG-LGKDTYSIVGQGKIDSIINSRPEKLRELFEEAAGISKYKSRKMDA 177
Query: 180 ---LEDEKGKAEEKSALVYQKKRTV-VLERKQKKEQKEEAERHLRLQDQLKSLKKEHFL- 234
LE + L+++ ++ V LE+ +K A+++ RL+++LK L+ L
Sbjct: 178 EKRLEKTNHDLQRIEDLIWELEKQVGPLEKAAQK-----AKKYRRLKEELKVLEVNLLLD 232
Query: 235 -W-------------------QLFNIEKDITKASKDLEAEKRS----------------- 257
W +L ++ ++T++ + LE+ +R+
Sbjct: 233 KWDKNLDRLSSFEEDEQLLIHKLKSLTNNLTESQEKLESLQRTLKVKKDELSRLRDRYYR 292
Query: 258 ----REEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPELLKLNEE 313
REE L E++++G +E +EI + E RLD+ L++L E+
Sbjct: 293 QKSKREEAENTLCILEERRQGLSREKENLNQEIKDLNLRREELTGRLDEIGSRLIELKEK 352
Query: 314 MSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEELNEKSRDGAGRLPLL 373
+ N +S K L+ +E + D+ L+ I D G + L
Sbjct: 353 IDNYNQNYESKKVLLDEIKENLDREKQDLFFLRNNILD----------------GNVELK 396
Query: 374 DTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQE 433
D +++ Q+KE R +H + E+ K ++ ++S+ L+ +E
Sbjct: 397 DIS-SQFEQLKE-----------------RGRHLEEEI-KRIKTTRDKISSEYDALNERE 437
Query: 434 DQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELK 493
D++R K++ + + LT LK+E ++Q + ++++++ ++K+ E + L L
Sbjct: 438 DKLRTYLKSVDNKIEEKRSVLTDLKEEELNLQARLEEAKKRFNRTRNKLNEKNSHLSILH 497
Query: 494 ADRHENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVED 553
E + + + + G+ G + D KKY LA+ A+G + ++V+D
Sbjct: 498 EMEDSLEGYYRGVKNILKARSKLTGIIGVVADQI-EVDKKYELAIETALGGRLQNIIVKD 556
Query: 554 ENTGKECI---------------------------------------------------K 562
+ + +EC+ K
Sbjct: 557 DKSARECVDYLKETKGGQATFLPVNMVNGRKVNFKNNQVKKVDGFLGIASSFVDCEDYLK 616
Query: 563 AVL-FAVGNTLVCDGLDEAKVLSWSGER-FRVVTVDGILLTKAGTMTGGTTGG----MEA 616
V+ + +G T++ L A ++ +R F++VT++G ++ G +TGG+ + +
Sbjct: 617 PVIEYLLGRTIISTDLKSAIEIARLRKRGFKIVTLEGDVINSGGAITGGSKNSNKKMLLS 676
Query: 617 RSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRS 676
RS++ +D K E LK + S E+ ++ +++ + E K ++ I+ EIEK +
Sbjct: 677 RSRKIEDLKKEVLKLQN----SLGEDSKNLNQLENKLKEVLNKKEVIKNDIRDLEIEKNN 732
Query: 677 IEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSE 736
L L QEK + E + I + D++ + KLE ++ + D DFS
Sbjct: 733 YHKDLIRLEQEKTKLSERLEEIDEEFVDCHDRLGKNDAAKQKLEDKLKALND----DFSL 788
Query: 737 SVGVANIREYEENQLKA-AQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKLESS-- 793
+E +L+A +N+ +E L LA+L + E +K + +S + +E +
Sbjct: 789 EKNEIENKEKRVEELEARHENINDEITRLKINLAQLNEKRESLRKEEEKSNKELIELAEK 848
Query: 794 -------LSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEW 846
+ + +++K + KEG + +G+I + K ++ + +E ++ I
Sbjct: 849 NEEFKERYNKILSEIKGINNKEGQLNELKVKLSGEIEKLKNDLNLTEKEVEEKQQRIDML 908
Query: 847 EKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPME-----T 901
+++ S T L K + + E +I +L +R + I+E E + V P ED + T
Sbjct: 909 QREVSDLQTRLDKKKDEKHQIELKITRLENRNERIVEILENDYDVKP--EDGFDDRIKIT 966
Query: 902 DSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAP-NLKALDQYE 960
+ S G QK+ L + I+K N A+++Y
Sbjct: 967 NYSRAG-----------------------------QKVKELKNAIKKLGTVNQGAIEEYN 997
Query: 961 ALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSN 1020
L+++ + + + K ++ +++ LF EAF ++ + +K+L
Sbjct: 998 DLVDRLDYLQNQHDDLLKAKESITKVIQEIEETMSSLFHEAFLKVNGEFNNTFKELFN-- 1055
Query: 1021 THPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYK 1080
GG A L L ++ G++ A PP K+ + + +SGGE+ + A+AL+F+
Sbjct: 1056 ----GGQASLKLTEPENLLETGVEIVAQPPGKQLKKLSLMSGGERALTAIALVFAFLKVN 1111
Query: 1081 PSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDK 1140
PSPF+ILDE+DA LD+ NV + A +I+ S Q ++++ + + +
Sbjct: 1112 PSPFYILDEIDAPLDDANVTRFARYIKEYSRFA-------------QFLIVTHRKNMMAE 1158
Query: 1141 AEALVGV 1147
AE + GV
Sbjct: 1159 AETIYGV 1165
>sp|Q69GZ5|SMC_METVO Chromosome partition protein Smc OS=Methanococcus voltae GN=smc PE=3
SV=1
Length = 1199
Score = 195 bits (495), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 321/1280 (25%), Positives = 559/1280 (43%), Gaps = 231/1280 (18%)
Query: 4 LLSPGKIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-L 62
++S +IH L+NFKS+K ++ P FTAI+GPNG+GKSN +D I FVLG + + L
Sbjct: 1 MISISEIH---LKNFKSFKNTKLKIP-DGFTAILGPNGSGKSNTIDGICFVLGKTSAKSL 56
Query: 63 RGGQLKDLIYAYDDKEKEQKGRRAF--------------------VRL-----VYQLGNE 97
R G+ LI ++ K + F V+L Y + E
Sbjct: 57 RAGKFNQLITYHNGKRADYAEVTLFFDNINREIPIDSDKVGICRKVKLNGDNNYYVVWYE 116
Query: 98 SELQFTRTITSSGGSEYRIDGRV-----VNWDEYNAKLRSLGILVKARNFLVFQGDVESI 152
E Q T+ T S + +V + +E L + ++ N ++ QGD+ I
Sbjct: 117 VEKQNTKINTESSQKKTSKASKVEKRRRMKKNEVLDLLSKISLIADGPN-IILQGDLLRI 175
Query: 153 ASKNPKELTALLEQISGSDELKREYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQK 212
+P E +L+++SG E + E + E +A E + + V ++ K++K
Sbjct: 176 IDTSPNERRKILDEVSGVAEFDEKSEKAKKELSQAREYIEKIDIRINEVRANLEKLKKEK 235
Query: 213 EEAERHLRLQDQLKSLKKEHFLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQK 272
E+AE++ +LK K + L SK +E K +E E+E ++ K
Sbjct: 236 EDAEKYTVYNKKLKVTK--YIL------------TSKKVEFLKMVLDETKDEIEALKETK 281
Query: 273 RGKRKELAKYLKEIAQCEKKIAERNNRLD-KSQPELLKLNEEMSRINSKIKSSKKELERK 331
++++ EI + KI E N L+ K E+++L++ + + + + K LE
Sbjct: 282 NCYIQDISNIDSEIIGLKVKINELVNELNEKGSEEVMELHKSIKELEVNLNNDKNALE-- 339
Query: 332 REERRKHANDIKELQKGIQDLTGKLEELNE-KSRDGAGRLPLLDTQLTEYFQIKEEAGMK 390
N I +L+ ++ K +LNE K + R+ L + IKE
Sbjct: 340 --------NAIDDLKHTLKMEESKNNDLNETKEKINNIRIDTLKKEAEAKVLIKE----- 386
Query: 391 TAKLRDEKEVLDR---EQHADLEVLKNLEANL--------QQLSNREHELDAQEDQMRKR 439
KL +E++ L++ + + ++ LKN E+ L ++L ++EL+ E+ + R
Sbjct: 387 IEKLNEERQNLEKKVEQSESQVKALKNQESKLSERINDTQKELYGLKNELNQLENTLNNR 446
Query: 440 ----QKN----------------ILDASGGHKD------ELTKLKKELRSMQDKHRDSRQ 473
QKN + D +K+ EL KK+L+ + DS+
Sbjct: 447 TFDYQKNNETIENLTNQIAEFSDLEDTKKLYKELEDIAVELEFSKKKLQEKITERNDSQS 506
Query: 474 KYENLKSKIGEIENQLRELK------ADRH-ENERDAKLSQAVETL-------------- 512
K +NL S+ + +++ LK DR + DAKL V+
Sbjct: 507 KLDNLHSEYVKENARIKTLKDMENFSLDRAVKGVLDAKLPGVVDIAGNLAKTKGEYKTAI 566
Query: 513 -----KRLFQGVHGRMTDLCRPT----QKKYNLAVTVAMGKF--MDAVVVEDENTGKECI 561
RL V +M D R QK+ A + M + MDA + D + I
Sbjct: 567 EVAGGARLNHIVVKKMDDGSRAINYLKQKRLGRATFLPMDRIKGMDAKDISDTGIIGKAI 626
Query: 562 KAVLFAV----------GNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTT 611
V F + GNT + D L+ AK LS + R VT++G ++ +G M GG
Sbjct: 627 DLVEFDIKYTNVFKFIFGNTHIVDNLENAKKLSLKY-KARFVTLEGEVIEPSGAMVGGNI 685
Query: 612 GGMEARSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAE 671
A D KK+ L I+E++ S +I L KI
Sbjct: 686 RRNSAIKVDIDMKKLTNLSE-------------DIKELEQILSNVKDEIERLNNKINTCS 732
Query: 672 IEKRSIEDKLANLRQEKRTIKEEIGR-----IKPDLQKLKDKIDRRTTDINKLERRINEI 726
K ++++L R ++ KEEI + IK +L L KID +++ + +++
Sbjct: 733 TRKLELDNRLKIARDQEFK-KEEITKSNNLKIK-ELNMLNSKIDDEISELTDEKEILSQK 790
Query: 727 TDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESR 786
L SE +G RE N++K+ +N ++L+K + ++++ +
Sbjct: 791 VQNLDNKLSEVMGQ---RERIVNEIKSYEN---------SELSK--------RIKEIDHK 830
Query: 787 IKKLESSLSTLENDLKQ----VKK----KEGDVKSATETATGDITRWKEEMRGWKSNSDE 838
I++ ESS +TLEN++K+ VK+ K ++ S ++ +K + +KSN +
Sbjct: 831 IRENESSKNTLENEIKKGAILVKEVLIPKISELNSNIKSLADKKNMFKNSVEIYKSNIES 890
Query: 839 CEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKC-----ELECIVLP 893
+ + + T L L + E +IE L + K+E+ EK ++ I +
Sbjct: 891 NSSILSDKRGKYEELTKGLKDLTDKKECYELEIENLQNNKEELREKATDIDNQVNVINVD 950
Query: 894 TVEDPMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALI-SEIEKTAP- 951
+ + + N + + E LE++ ++ AL+ S I+K P
Sbjct: 951 RAKYETRLEEEERKLYLCDTLENIEDISDEMIEETYSLEIDDLERNQALLESSIKKLEPV 1010
Query: 952 NLKALDQYEALLEKERTVTEEFEAARKEEKQAADAY----NSVKQKRYGLFMEAFNHISS 1007
N++A++ Y+ + E+ EE RKE +Q Y + V++++ FM+ ++ ++
Sbjct: 1011 NMRAIEDYDFINER----YEELFGKRKEYEQEEGKYLQLISEVQKRKKETFMKTYDRVAE 1066
Query: 1008 SIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTV 1067
+ ++IY ++ GG L+LENE+DPF G+ A P K+ ++++ +SGGEK++
Sbjct: 1067 NYEQIYGEI--------GGNGKLSLENEEDPFSGGLLIDASPMNKQLQNLDVMSGGEKSL 1118
Query: 1068 AALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQ 1127
ALA LF+I PSPF++LDEVDAALD N + + I + S E Q
Sbjct: 1119 TALAFLFAIQRLNPSPFYVLDEVDAALDTKNASLIGDMISNASKES-------------Q 1165
Query: 1128 SIVISLKDSFYDKAEALVGV 1147
IVIS ++ K+ + GV
Sbjct: 1166 FIVISHREQMISKSNVMYGV 1185
>sp|Q9HK21|SMC_THEAC Chromosome partition protein Smc OS=Thermoplasma acidophilum (strain
ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=smc PE=3 SV=1
Length = 1140
Score = 188 bits (478), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 289/1244 (23%), Positives = 529/1244 (42%), Gaps = 236/1244 (18%)
Query: 10 IHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQLK 68
I R+E NFKS++ ++I I GPNG+GKSN+ D + FVLG ++ +R +L
Sbjct: 5 IERIEAHNFKSFRRKKVINFTKGLNVISGPNGSGKSNIGDMLLFVLGTKSIHAVRADRLS 64
Query: 69 DLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTR--TITSSGGSEYRIDGRVVNWDEY 126
DL+ + G V + ++ + L R I S Y ++G E
Sbjct: 65 DLV-------SKGSGNECSVSVTFRSDDGRSLVIERRLVIEDEPKSYYYVNGVRSRLSEI 117
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGK 186
+ L S+GI +F V QGD+ S + +E L+E+ISG D+ E E+ K
Sbjct: 118 DETLASMGINFGTYSF-VLQGDINDFISYSGQERRKLIERISGVDQFDSEI-----ERVK 171
Query: 187 AE-EKSALVYQKKRTVVLERKQKKE----QKEEAERHLRLQDQLKSLKKEHFLWQLFNIE 241
A+ E + + +T++ E++Q E +KE+ ER+ L + + ++ L + +E
Sbjct: 172 ADIEAVSRNMEINQTIIDEKRQNLERLRTEKEKKERYDALLKRKRDVEYTEILNRKNAME 231
Query: 242 KD---ITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNN 298
+ I DL E EE +LE + R +R+++AK + ++ E
Sbjct: 232 RQKRTIEGQISDLTKEIAQLEERRSDLEKRSEAIRIRREDVAKRIDDLTSGE-------- 283
Query: 299 RLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEE 358
+++ + +L + ++++I I + +E+ E K+ ++ + I+DL ++EE
Sbjct: 284 -MNRVKTDLHSVEVDIAKIRGIIDEKNRNMEKLEETIAKYESERDSTDREIEDLDRQIEE 342
Query: 359 LNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEAN 418
++ R R L + + F + + A+ R + K +
Sbjct: 343 KAKRKRALEDRYADLKKRYDDLFSRAQAEAVDAAETRRKS--------------KEYQEK 388
Query: 419 LQQLSNREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQ----- 473
+ L EL A QM +L ++ L ++R+ + K +++ +
Sbjct: 389 IDGLGREIEELKAAGSQMNADLAVLLQKKAALEERKEDLDLKIRTSEWKAKETSEDMGKY 448
Query: 474 --KYENLKSKIGEIENQLRELKADRHENERDAKLSQA--------VETLKRLFQGVHGRM 523
KY +LK+K +I +++ +LK++ E E AK++ + V+ L+ +GV G +
Sbjct: 449 SRKYYDLKAKYDQINDRISDLKSEISEKEASAKIASSRVPEYVRNVKMLEESVEGVIGLV 508
Query: 524 TDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECIK--------------------- 562
DL +KY AV A G ++AVVV+D+ KECI+
Sbjct: 509 RDLI-SYGEKYVKAVESAGGGRLNAVVVKDDAVAKECIQILKDRKISPMTFLPLNKMRDP 567
Query: 563 -------------------------------AVLFAVGNTLVCDGLDEAKVLSWSGERFR 591
AV +A+ +T++ +D + L FR
Sbjct: 568 PAQRDVGKISKDPGYLGILMDFVDFEDQYRSAVYYAIRDTILVQDIDAGRRLMGI---FR 624
Query: 592 VVTVDGILLTKAGTMTGG----TTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSI- 646
+VT+DG + G++TGG + A Q D +EG+K Q S +++ I
Sbjct: 625 LVTLDGDIFDPGGSITGGYRNYASDYASALRMQHD---LEGMKI---QLSSLMDDRSRIK 678
Query: 647 REMQLRESETSGKISGLEKKIQYAEI--EKRSIEDKLANLRQEKRTIKEEIG---RIKPD 701
REM SE S E + EI E+ ++ + R+E + + ++I R D
Sbjct: 679 REMDQAFSEMS------EASRRTGEIMKEQEMLKKEAERSREELKQVMDDISSTDRAIAD 732
Query: 702 LQKLKDK----IDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNV 757
+++ D+ I+++T D++K + +N++ DR+ +F +++G
Sbjct: 733 KKRMIDENEKVIEQKTLDLHKYQEALNDLYDRIDPEFFKNIG------------------ 774
Query: 758 AEERLNLSNQLAKLKYQLE--YEQKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSAT 815
+LSN++ +++ +++ + + SR L S LE+ + K +E + +
Sbjct: 775 -----DLSNEINEVRSEIDAVASELNQITSRRDILSSERKHLEDQMIDTKLQENSIAAEI 829
Query: 816 ETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLI 875
+ G +E+ + ++ ++ E Q A + ++ IN +A I+
Sbjct: 830 DDLNGKKRELEEKAKKYQYALNDLEGRYGNLSAQVREADKQIREMENGINDAKASIDL-- 887
Query: 876 SRKQEIMEKCELECIV----LPTVEDPMETDSSSPGPVFDFSQLNRSYLQERRPSEREKL 931
K ++M +++ + L ++E + + S + D + R+++
Sbjct: 888 --KNDLMNDLKVKAGILEGNLSSIERELSSYSGCEAVIGDLQAM------------RQEI 933
Query: 932 EVEFKQKMDALISEIEKTAPN-----LKALDQYEALLEK---ERTVTEEFEAARKEEKQA 983
E + MD + EI AP LK LD YE EK E+ EE A E+K+
Sbjct: 934 E---RAIMD--LGEINNAAPQQYEDALKDLDDYEKKHEKLMEEKKALEETTAMLNEKKRE 988
Query: 984 ADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGI 1043
+F++ F IS ++ +Y + GGTA L + DP +
Sbjct: 989 -------------VFVKTFTDISEKMNYVYGIIN-------GGTAKLIMIGS-DPLTSSV 1027
Query: 1044 KYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVA 1103
+ + P K ++ LSGGEK+VAAL+ + ++ PS + LDEVD LD N +
Sbjct: 1028 EVSVTPKDKATVKIQALSGGEKSVAALSFITAVQILMPSSIYFLDEVDMYLDAYNAENMI 1087
Query: 1104 GFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
I +Q+A E Q+IVISLK + A +GV
Sbjct: 1088 KMI----------SQNAGEA---QTIVISLKSLVFSYASNAIGV 1118
>sp|P41003|SMC2_SCHPO Structural maintenance of chromosomes protein 2
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=cut14 PE=1 SV=2
Length = 1172
Score = 173 bits (438), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 292/1267 (23%), Positives = 533/1267 (42%), Gaps = 236/1267 (18%)
Query: 9 KIHRLELENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGV-RTGQLRGGQ 66
KI L ++ FKSY +I + D F AI G NG+GKSN++DAI FVLG+ +R
Sbjct: 2 KIEELIIDGFKSYAVRTVISNWDDQFNAITGLNGSGKSNILDAICFVLGITNMSTVRAQN 61
Query: 67 LKDLIYAYDDKEKEQKG-RRAFVRLVYQ----------LGNESELQFTRTITSSGGSEYR 115
L+DLIY ++ Q G RA V +V+ N ++ TR I G S+Y
Sbjct: 62 LQDLIY-----KRGQAGITRASVTIVFNNRDPASSPIGFENHPQVSVTRQIIMGGTSKYL 116
Query: 116 IDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELK- 174
I+G +S+ + + NFL+ QG + + + E+ +++E+ SG+ +
Sbjct: 117 INGHRALQQNVQNLFQSVQLNINNPNFLIMQGRITKVLNMKATEILSMIEEASGTRMFEE 176
Query: 175 ---REYEVLEDEKGKAEEKSALV-------YQKKRT---VVLERKQKKEQKEEAERHLRL 221
+ + ++ ++ K EE + L+ K RT LE + E
Sbjct: 177 RKEKAFRTMQRKEAKVEEINTLLREEIEPRLTKLRTEKKTFLEYQHIYNDLERLSHLCTA 236
Query: 222 QDQLK-SLKKEHFLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQK-------- 272
D K SLK E Q I + L+ K+ + +++ ED++
Sbjct: 237 YDYYKLSLKVEELTVQASQKHSHIAEMESSLQTSKQEVLILKEKIKKIEDERMRQMSVSS 296
Query: 273 -RGKRKELAKYLKEIAQCEKKIAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKEL--- 328
R +L + I + I +N L++ +L ++ + + + ++ +K L
Sbjct: 297 DRTLDSQLQTVNENITRISTSIELKNTALEEEHGDLQQIRGKAKELETLLRGKRKRLDEV 356
Query: 329 ----ERKREERRKHANDIKELQKGIQDLTGKL------------------EELNE-KSRD 365
E++++E + + D K ++ I LT L + LN+ K+
Sbjct: 357 LSVYEKRKDEHQSISKDFKSQEELISSLTTGLSTTEGHETGYSRKLHEARDTLNDFKAEK 416
Query: 366 GAGRLPL--LDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNLEANLQQLS 423
RL L L+ Q++ K EA + +L E ++L LKN +++
Sbjct: 417 ETNRLKLEGLNKQISLTKPKKAEATKRCDQLNREIDILQNHVEKLKMSLKNTNSDI---- 472
Query: 424 NREHELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQKYENLKSKIG 483
ED ++++ K + G +EL LK +L M+ + D ++ +SK+
Sbjct: 473 -------TGEDVLQQKLKQLAKDRGNLLNELDALKSKLAYMEFTYTDPTPNFD--RSKVK 523
Query: 484 EIENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQK-------KYNL 536
+ QL L + ++ + +++ GR+ +L T+K K NL
Sbjct: 524 GLVAQLLTLNEENYDKQTALEITAG------------GRLYNLIVETEKIGAQLLQKGNL 571
Query: 537 A--VTVAMGKFMDAVVVEDENTGK--------------------ECIKAVLFAVGNTLVC 574
VT+ + + V E G E + A+ + G+TLVC
Sbjct: 572 KRRVTIIPLNKITSFVASAERVGAAKKISNNKAQLALELIGYDDELLPAMQYVFGSTLVC 631
Query: 575 DGLDEAKVLSWSGE-RFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKK 633
D + AK +++ + + VT+DG + +GT+TGG+ Q +K+ L+ K
Sbjct: 632 DTPESAKKVTFHPSVKLKSVTLDGDVYDPSGTLTGGSVNKSAGPLLQI--QKLNSLQLKL 689
Query: 634 EQYESELEELGSIREMQLRESET-SGKISGLEKKIQYAEIEKRSIEDKLANLRQEKRTIK 692
+ SE E+L E QL++ +T + LE++IQ + E L L +++ T
Sbjct: 690 QVVTSEYEKL----ETQLKDLKTQNANFHRLEQEIQLKQHE-------LTLLIEQRET-- 736
Query: 693 EEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEENQLK 752
+ R+ D Q+ KD D+ L++R+ E+ DRL +++ K
Sbjct: 737 DSSFRLLSDYQQYKD-------DVKDLKQRLPEL-DRLILQSDQAIK------------K 776
Query: 753 AAQNVAEERLNLSNQLAKLKYQL-EYEQKRDVESRIKKLESSLSTLENDLKQVK----KK 807
+++ E + N +++A+L+ + +Y+ K D + I LE S END VK +
Sbjct: 777 IERDMQEWKHNKGSKMAELEKEFNQYKHKLDEFTPI--LEKS----ENDYNGVKLECEQL 830
Query: 808 EGDVKSAT------ETATGDITRWKEEMRGWKSNSDECEKEIQEW-----------EKQA 850
EG++++ E+ T I E+ N + K++ E K+
Sbjct: 831 EGELQNHQQSLVQGESTTSLIKTEIAELELSLVNEEHNRKKLTELIEIESAKFSGLNKEI 890
Query: 851 SAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDS------- 903
+ +TS+ +IN+ E I++L ++ E E V T + +E ++
Sbjct: 891 DSLSTSMKTFESEINNGELTIQKL----NHEFDRLEREKSVAITAINHLEKENDWIDGQK 946
Query: 904 ---SSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYE 960
G +FDF N RE+L K + ++ + A N K +D +
Sbjct: 947 QHFGKQGTIFDFHSQNMRQC-------REQLH-NLKPRFASM-----RKAINPKVMDMID 993
Query: 961 ALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSN 1020
+ +KE + + +++K+ D S+ + + + + ++SS I+ +L N
Sbjct: 994 GVEKKEAKLRSMIKTIHRDKKKIQDTVKSIDRFKRSALEKTWREVNSSFGEIFDELLPGN 1053
Query: 1021 THPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYK 1080
+ L E+ F G++ + + +LSGG++++ ALAL+ S+ YK
Sbjct: 1054 SAELQPP-------ENKEFTDGLEIHVKIGSIWKDSLAELSGGQRSLVALALIMSLLKYK 1106
Query: 1081 PSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDK 1140
P+P +ILDE+DAALD + + I++K G Q I++SLK+ +
Sbjct: 1107 PAPMYILDEIDAALDLSHTQNIGRLIKTKF-------------KGSQFIIVSLKEGMFTN 1153
Query: 1141 AEALVGV 1147
A L V
Sbjct: 1154 ANRLFHV 1160
>sp|O66878|SMC_AQUAE Chromosome partition protein Smc OS=Aquifex aeolicus (strain VF5)
GN=smc PE=3 SV=1
Length = 1156
Score = 164 bits (415), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 193/790 (24%), Positives = 321/790 (40%), Gaps = 229/790 (28%)
Query: 469 RDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRMTDLCR 528
R+ Q+ + ++ E+ +L E+ ++ ER+ + V + + +GV+G +++L R
Sbjct: 461 RNLTQELNIYEKRLSEVRKKLEEVLKEKGAIEREVRSFSDVSDVFKDIKGVYGSVSELIR 520
Query: 529 PTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI--------------------------- 561
++ A+ VA G + +VVEDE KECI
Sbjct: 521 VKNPEHITAIEVAGGGRLKFIVVEDEEVAKECIQLAKRMNLGRFSFIPLNRVRVEERPLR 580
Query: 562 ----------------------KAVLFAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGIL 599
K V F G+TL+ + + AK + +R+VT++G L
Sbjct: 581 YPRTKGAVDFAVNLVEYDPKFEKVVKFVFGDTLIVENFESAKAIGIGN--YRMVTLEGEL 638
Query: 600 LTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGK 659
K+G +TGG +K++ YE EL+ L +
Sbjct: 639 FEKSGVITGGAVKPSGELNKRY--------------YEEELQRLNA-------------- 670
Query: 660 ISGLEKKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKL 719
E+ +K E I+ ++++++ I +T +
Sbjct: 671 ---------------------------EEEKLKNEESIIQKKIREIRNLISEKTALLKVS 703
Query: 720 ERRINEITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQ 779
ER+I E++ + E +E EN + + + E+ LN+ ++L +L ++EY
Sbjct: 704 ERKIEELSSEGLEQYEEK-----FKEKLENSKEYLKILEEKLLNVEDKLKELAEEIEY-- 756
Query: 780 KRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDEC 839
E L +K KEGD+K + + + E + E
Sbjct: 757 -----------------YEEKLNNLKLKEGDIKR--HYSREGVEEKRREYSKVRKQVSEI 797
Query: 840 EKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPM 899
EK + E E++ + T L L ++I KE + E L R + + K E+E ++L E +
Sbjct: 798 EKSLNEIERELNKKTYELEYLEKEIQEKEREREYLTERIKSL--KKEIENLILFK-EKTL 854
Query: 900 ETDSSSPGPVFDF---------------SQL-------------------NRSYLQERRP 925
+ + V+D+ S+L N L+E+
Sbjct: 855 QEVKEAEVKVYDYIKQKEELEKEILNLKSKLGKLKIKEEELKEKIFEKEKNLKVLEEK-- 912
Query: 926 SEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAA-----RKEE 980
E L E K+ D + E++ P LK EK + VTEE + R EE
Sbjct: 913 --IENLNEELKEYEDLKLGADEESIPKLK---------EKLKRVTEEIQKLGSVNFRAEE 961
Query: 981 KQAADA--YNSVKQKRYGL---------------------FMEAFNHISSSIDRIYKQLT 1017
A + +N K+K+ L F+EAFN I+ S+ RI+ L+
Sbjct: 962 DYAEELKRFNDYKEKQQKLKEESKAIKKLIEETENKKRKVFLEAFNQINKSLKRIFSFLS 1021
Query: 1018 RSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIH 1077
P GG A + L+N +DPF G++ T P K + +E +SGGEKT+AAL+L+F++
Sbjct: 1022 -----P-GGKAQMFLDNPEDPFSGGVQLTVKPRGKDVQYLEAMSGGEKTLAALSLIFALQ 1075
Query: 1078 SYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSF 1137
YKPSPF+ DEVDA LD +N KV IR KS E Q IV++L++
Sbjct: 1076 EYKPSPFYYFDEVDAHLDEVNAKKVGELIREKSKEA-------------QFIVVTLREVV 1122
Query: 1138 YDKAEALVGV 1147
A+ +VGV
Sbjct: 1123 TSFADKIVGV 1132
>sp|Q12267|SMC4_YEAST Structural maintenance of chromosomes protein 4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC4 PE=1
SV=1
Length = 1418
Score = 158 bits (399), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 192/721 (26%), Positives = 327/721 (45%), Gaps = 143/721 (19%)
Query: 10 IHRLELENFKSYKGLQIIGPF-SDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I+ L LENFKSY G Q++GPF + F+A++GPNG+GKSN++D++ FV G R ++R +L
Sbjct: 156 INELVLENFKSYAGKQVVGPFHTSFSAVVGPNGSGKSNVIDSMLFVFGFRANKMRQDRLS 215
Query: 69 DLIYAYDDKEKEQKGRRAFVRLVYQLGNES----------ELQFTRTITSSGGSEYRIDG 118
DLI+ + Q A V Y + S L TR + S+Y I+
Sbjct: 216 DLIHKSEAFPSLQSCSVA-VHFQYVIDESSGTSRIDEEKPGLIITRKAFKNNSSKYYINE 274
Query: 119 RVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKE-------LTALLEQISGSD 171
+ ++ E L++ GI + + FL+ QG+VE+IA PK L LE I G+
Sbjct: 275 KESSYTEVTKLLKNEGIDLDHKRFLILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGTA 334
Query: 172 ELKREYEVLEDEKGKAEEKSALVYQKK-RTVVLERKQKKEQ--KEEAERHLRLQDQLKSL 228
K ++E+ G+ E + + +K+ R +++R++ + KE A L + QL L
Sbjct: 335 NYK---PLIEERMGQIENLNEVCLEKENRFEIVDREKNSLESGKETALEFLEKEKQLTLL 391
Query: 229 KKEHFLWQLF--------NIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELA 280
+ + F ++L +EK I+ ++KDLE EK +E ++++ D+ + +RKE+
Sbjct: 392 RSKLFQFKLLQSNSKLASTLEK-ISSSNKDLEDEKMKFQESLKKV----DEIKAQRKEIK 446
Query: 281 KYLKEIAQCEKKIAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHAN 340
+ + EK + L+ ++ + L E + SK++ ++K L+ + + N
Sbjct: 447 DRISSCSSKEKTLVLERRELEGTR---VSLEERTKNLVSKMEKAEKTLKSTKHSISEAEN 503
Query: 341 DIKEL-------QKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAK 393
++EL + I+DLT LE+ E+S +L L D + +
Sbjct: 504 MLEELRGQQTEHETEIKDLTQLLEK--ERSILDDIKLSLKD----------KTKNISAEI 551
Query: 394 LRDEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNI------LDAS 447
+R EKE+ + DL+ L+ Q+ E EL E+ K +KN+ + A
Sbjct: 552 IRHEKEL----EPWDLQ----LQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAK 603
Query: 448 GGHKDEL----TKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQL-----RELKADRHE 498
HK EL LKK+L S++D+ + + + K+ E++ L R ++A R
Sbjct: 604 KTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAMEA-RSS 662
Query: 499 NERDAKLSQAVETLKRL-----FQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVED 553
+ S+ + L RL G HGR+ DL +++A++ A + +D VVV+
Sbjct: 663 LSKAQNKSKVLTALSRLQKSGRINGFHGRLGDLG-VIDDSFDVAISTACPR-LDDVVVDT 720
Query: 554 ENTGKECI------------------------------------------------KAVL 565
+ CI A
Sbjct: 721 VECAQHCIDYLRKNKLGYARFILLDRLRQFNLQPISTPENVPRLFDLVKPKNPKFSNAFY 780
Query: 566 FAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGG----TTGGMEARSKQW 621
+ +TLV L +A +++ +RFRVVTVDG L+ +GTM+GG G M+ + Q
Sbjct: 781 SVLRDTLVAQNLKQANNVAYGKKRFRVVTVDGKLIDISGTMSGGGNHVAKGLMKLGTNQS 840
Query: 622 D 622
D
Sbjct: 841 D 841
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 145/257 (56%), Gaps = 28/257 (10%)
Query: 898 PMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEF-KQKMDALISEIEKTAPNLKAL 956
PM D +S +L+ L+E L+VE + K++ L +E+T ++ L
Sbjct: 1174 PMNIDETSDEVSRGIPRLSEDELRE--------LDVELIESKINELSYYVEETNVDIGVL 1225
Query: 957 DQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQL 1016
++Y L + + + A ++ + + +K+KR+ FM FN IS ++ +Y+ +
Sbjct: 1226 EEYARRLAEFKRRKLDLNNAVQKRDEVKEQLGILKKKRFDEFMAGFNIISMTLKEMYQMI 1285
Query: 1017 TRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSI 1076
T +GG A L L + DPF G+ ++ MPP K +R++ LSGGEKT+++LAL+F++
Sbjct: 1286 T------MGGNAELELVDSLDPFSEGVTFSVMPPKKSWRNITNLSGGEKTLSSLALVFAL 1339
Query: 1077 HSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDS 1136
H YKP+P +++DE+DAALD NV+ VA +I+ ++ Q IVISL+++
Sbjct: 1340 HKYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNA-------------QFIVISLRNN 1386
Query: 1137 FYDKAEALVGVYRDSDR 1153
++ A+ LVGVY+ +R
Sbjct: 1387 MFELAQQLVGVYKRDNR 1403
>sp|B9E1H0|SMC_CLOK1 Chromosome partition protein Smc OS=Clostridium kluyveri (strain NBRC
12016) GN=smc PE=3 SV=1
Length = 1185
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 292/1285 (22%), Positives = 533/1285 (41%), Gaps = 272/1285 (21%)
Query: 13 LELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLG---VRTGQLRGGQLKD 69
+E++ FKS+ + T+I+GPNG+GKSN+ DA+ +VLG V+T LRGG+++D
Sbjct: 8 IEIKGFKSFADKTELIFTGGITSIVGPNGSGKSNISDAVRWVLGEQSVKT--LRGGKMED 65
Query: 70 LIYAYDDKEKEQKGRRAFVRLVYQLGNE--------SELQFTRTITSSGGSEYRIDGRVV 121
+I+A K ++ L NE S + +R + SG SEY I+
Sbjct: 66 VIFAGTQFRKP----LGLCQVSLTLDNEDKKLSLEYSNITVSRRLYRSGESEYYINNVQC 121
Query: 122 NWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLE 181
+ + GI + + ++ QG ++++ S ++ LLE+ +G +K + E
Sbjct: 122 RLRDIHELFMDTGIGREGYS-IIGQGRIDALLSGKQEDRRLLLEEAAGI--VKFRWRRSE 178
Query: 182 DEKGKAEEKSALVYQKKRTVVLERKQKKEQKE--EAERHLRLQDQLKSLKKEHFLWQLFN 239
EK + L+ + E + K + E +A+ LRL ++LK +K ++ L
Sbjct: 179 AEKKLENTEVNLIRIEDILHTYEERLKPLELENKKADEFLRLSEELKDKEKTVLIYSLKK 238
Query: 240 IEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNR 299
I+ I K +E S E EL + G + + E +CEK ++
Sbjct: 239 IQHKIDKLESSMERITSSNRESHLELTKLREDVNGYNIRMENIMDESTRCEKDYYDKREL 298
Query: 300 LDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLTGKLEEL 359
+++ + ++ L +++ + IK + EL++ ++ K + +GI L EL
Sbjct: 299 INQGENKIKLLKQKIEDLEDNIKRNYLELKQIENDKIKKS-------EGITLQNQNLLEL 351
Query: 360 NEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNL-EAN 418
K+R+ + +LD E +K + EK++ RE + K L E
Sbjct: 352 --KNREKEVNIGILDY----------ENNIK----KIEKDIYSREN-----ICKKLKEDK 390
Query: 419 LQQLSN----REHELDAQED-------------QMRKRQKNILDASGGHK---DELTKLK 458
+Q SN R H + ++D K I+ +S E++ +K
Sbjct: 391 IQYFSNISKLRNHIISIKKDGENIVEKIDKLKSSYESYSKAIIISSEKKNKLLGEISNIK 450
Query: 459 KELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVE-------- 510
K + Q+K ++ L + + EN L++L A + E + K+
Sbjct: 451 KNISVYQNKIDENNSGILELTNVLNLKENSLQKLNALYNTLEANYKMLVNFHKHYEGYNR 510
Query: 511 TLKRLFQGVHGRMTDL----CR------PTQKKYNLAVTVAMGKFMDAVVVEDENTGKEC 560
T+K L + + D+ C QKK+ + +++G + +V+ +E K
Sbjct: 511 TVKALMENIKNHKLDVPAQSCFLVGEIISLQKKFETCIEISLGNSISSVITNNEIIAKII 570
Query: 561 IK---------------------------------------------------AVLFAVG 569
IK + + +G
Sbjct: 571 IKYLKDNKMGRATFLPISIIKGRKISNLHKFEDIKGFIGVASELVSYSKEFKDVLDYILG 630
Query: 570 NTLVCDGLDEAKVLSWSGE-RFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEG 628
T++C+ +D A ++ E F++VT+ G ++ G +TGG+
Sbjct: 631 RTIICENIDNAFEIAKLAEYSFKIVTLSGDVVNSGGAITGGS------------------ 672
Query: 629 LKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKLANLRQEK 688
+Q R S G+ KR IE+ L + K
Sbjct: 673 --------------------LQKRSSNIIGR--------------KREIEETLVKIENTK 698
Query: 689 RTIKE---EIGRIKPDLQKL-------KDKIDRRTTDINKLERRINEITDRLYRDFSESV 738
T++ +I RIK D +KL K+KI ++ KL ++ N+ +R + ES
Sbjct: 699 ETLQVLNGDIRRIKSDKEKLHCQNEDFKEKIHLDNIELTKLHQQ-NDTIERETKKLIES- 756
Query: 739 GVANIREYEENQLKAAQNVAEERLN-LSNQLAKLKYQLEYEQKRD-----VESRIKKLES 792
RE ++K E LN L + KLK + E K D +E +K+ +
Sbjct: 757 -----RETANREIKLLYKNKEVNLNELQEEEKKLKEYSKEEIKNDDYILKMEEELKEGRN 811
Query: 793 SLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASA 852
++ L+ L +K K + ++ +++R +E++ + +EI+ EK
Sbjct: 812 RITDLKEGLTSLKVKRAQISENILSSERELSRLDQEIKSMDIKNRSIVEEIKLSEKIIHK 871
Query: 853 ATTSLSKLNRQINSKEAQ-IEQLISRKQEIMEKCELECIVLP---TVE----DPMETDSS 904
++LN N KE + ++Q + + QE +EK ++ I L V D + +
Sbjct: 872 -----NELNMYSNEKEVKDLKQYMEKLQESIEKSHVKTIELKQKINVSNEKVDNLTLIIN 926
Query: 905 SPGPVFDFSQLNRSYLQERRPS---------------------EREKLEVEFKQKMDALI 943
F QL + L ++ + + E LE E+K K+ L
Sbjct: 927 KKETSFHKIQLELTKLNSQKDNIYSRLKEDMNITCDGDIEYDVQIENLE-EYKSKIVHLK 985
Query: 944 SEIEKT-APNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAF 1002
S I K NL A+++Y+ L +K ++ + E K +++ +++ +K G+F E F
Sbjct: 986 SSISKLGVVNLGAIEEYKNLQKKITFLSSQKEDLIKSKQELKKVIDAMTEKMKGVFKENF 1045
Query: 1003 NHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSG 1062
+ + + +++L + GG+A L L + D I T PP K+ +++ +SG
Sbjct: 1046 VKLKKNFNDTFRELFK------GGSADLVL-TKGDELTGNIDITVQPPGKKLQNINLMSG 1098
Query: 1063 GEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADE 1122
GEK ++A+ALLF++ KP+PF ILDE++A+LD+ NV + A F+R S +D
Sbjct: 1099 GEKGLSAIALLFAMLKIKPTPFCILDEIEASLDDANVLRYAEFLRKFS-------RDT-- 1149
Query: 1123 GNGFQSIVISLKDSFYDKAEALVGV 1147
Q IVI+ + + ++ L GV
Sbjct: 1150 ----QFIVITHRKGTMEVSDVLYGV 1170
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 151 bits (381), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 159/595 (26%), Positives = 285/595 (47%), Gaps = 62/595 (10%)
Query: 566 FAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKK 625
+ GNT+V + +D AK L+ + R VT+DG ++ +G M GGT D K
Sbjct: 618 YVFGNTVVVENIDIAKELAKKYRKVRFVTLDGDVIEPSGAMIGGTFKSKAKIKVDVDLSK 677
Query: 626 IEGLKRKKEQYESEL----EELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKL 681
+ + + ESEL EE+ + ++ R S +I + I+ E+ KR I +K
Sbjct: 678 LNKIADEIIAIESELRKIKEEIERLSKIVKRSSAKKMEIENTLEIIKKNEMRKREIAEKN 737
Query: 682 ANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVA 741
+E ++I +L +++I R IN++E +INE+ +R + +E
Sbjct: 738 TIKIKELELKNKDILEELEELNLKREEILNR---INEIESKINELIERREKIINE----- 789
Query: 742 NIREYEENQ-LKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKLESSLSTLEND 800
++EYE ++ LK + E L + AKLK +++ E I K+E
Sbjct: 790 -LKEYESDENLKRMNEIEGELKILEKEKAKLKNEIDKGLTLVKEILIPKIE--------- 839
Query: 801 LKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKL 860
++ KK ++ + +I+ +KE + S +E K +E K T +L
Sbjct: 840 --ELNKKVSELINKKVILEKNISFYKESIEKNLSILEEKRKRYEELAKNLKELTEKKEQL 897
Query: 861 NRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQLNRSYL 920
++I + E + +++ + ++I + + E +E + + YL
Sbjct: 898 EKEIETLERERREILRKVRDIENRINELMVEKAKYESKLEEEER------------KLYL 945
Query: 921 QERR--PSEREKLEVE-FKQKMDALISEIEKTAP-NLKALDQYEALLEKERTVTEEFEAA 976
E+ E EK ++E + + L +EI+ P N++A++ Y + E+ + + E+ +
Sbjct: 946 CEKVDVSKELEKKDIEELEIYIGELENEIKSLEPVNMRAIEDYNYVAERYKELIEKRKEY 1005
Query: 977 RKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENED 1036
++EK+ ++ K+ +FME FN ++ + + +YK++ GG L+LENE
Sbjct: 1006 ERDEKKYLQLMEELENKKKEVFMEVFNKVAKNFEEVYKEI--------GGIGKLSLENEK 1057
Query: 1037 DPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDN 1096
+PF GI A P K+ ++ +SGGEK++ ALA LF+I PSPF++LDEVDAALD
Sbjct: 1058 NPFEGGILIDASPRGKKLLSLDAMSGGEKSLTALAFLFAIQRLNPSPFYVLDEVDAALDV 1117
Query: 1097 LNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGVYRDS 1151
NV+ +A I++ S + Q IVIS ++ KA+ + GVY ++
Sbjct: 1118 KNVSLIADMIKNASKDS-------------QFIVISHREQMVSKADVVYGVYMEN 1159
>sp|Q9SN90|SMC22_ARATH Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis
thaliana GN=SMC2-2 PE=2 SV=1
Length = 1171
Score = 146 bits (369), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 282/1269 (22%), Positives = 532/1269 (41%), Gaps = 254/1269 (20%)
Query: 10 IHRLELENFKSYKGLQIIGPF-SDFTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQL 67
I + LE FKSY ++ F F AI G NG+GKSN++D+I FVLG+ Q+R L
Sbjct: 3 IKEICLEGFKSYATRTVVPGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAANL 62
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQ--------LGNE--SELQFTRTITSSGGSEYRID 117
++L+Y K+ + RA V + + LG+E SE+ TR I G ++Y I+
Sbjct: 63 QELVY----KQGQAGITRATVSVTFDNSERNRSPLGHEDHSEITVTRQIVVGGKNKYLIN 118
Query: 118 GRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREY 177
G++ ++ S+ + V +FL+ QG + + + P E+ ++LE+ +G+
Sbjct: 119 GKLAQPNQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPMEILSMLEEAAGTR------ 172
Query: 178 EVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKK------E 231
+Y+ K+ L+ +KK+ K + L +D L +L+K +
Sbjct: 173 ----------------MYENKKEAALKTLEKKQTKVDEINKLLEKDILPALEKLRREKSQ 216
Query: 232 HFLWQLFNIEKDITK----ASKDLEAEKRSREEV---------MRELEHFEDQKRGKRKE 278
+ W N E D K A + ++AEK + M ++ D+ +G+ E
Sbjct: 217 YMQWANGNAELDRLKRFCVAFEYVQAEKIRDNSIHVVEEMKIKMTGIDEQTDKTQGEISE 276
Query: 279 LAKYLKEIAQCEKKIAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKH 338
L K +K + Q + A + ++ L+ E++R SK+ + + L+ + + K
Sbjct: 277 LEKQIKALTQARE--ASMGGEVKALSDKVDSLSNEVTRELSKLTNMEDTLQGEEKNAEKM 334
Query: 339 ANDIKELQKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEK 398
++I++L+K +++ L + +E + + + T L E +E G+ K ++
Sbjct: 335 VHNIEDLKKSVEERASALNKCDEGAAELKQKFQEFSTTLEECE--REHQGILAGKSSGDE 392
Query: 399 EVLDREQHADLEV-LKNLEANLQQL----SNREHELDAQEDQMRKRQKNILDASGGHKDE 453
E +Q D ++ + E L+QL S+ E EL ++ Q+ +Q DE
Sbjct: 393 EKCLEDQLRDAKISVGTAETELKQLNTKISHCEKELKEKKSQLMSKQ-----------DE 441
Query: 454 LTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHE------------NER 501
++ EL + ++ ++ +++L K E Q+ L+ DR +E
Sbjct: 442 AVAVENELDARKNDVESVKRAFDSLPYK----EGQMEALEKDRESELEIGHRLKDKVHEL 497
Query: 502 DAKLSQAVETLKRLFQG-----VHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENT 556
A+L+ T + + V G + L + + A+ V G + V+V+ E+T
Sbjct: 498 SAQLANVQFTYRDPVKNFDRSKVKGVVAKLIKVNDRSSMTALEVTAGGKLFNVIVDTEDT 557
Query: 557 GKECIK--------------------------------------------------AVLF 566
GK+ ++ A+ +
Sbjct: 558 GKQLLQKGDLRRRVTIIPLNKIQSHLVPPRVQQATVGKGNAELALSLVGYSEELKNAMEY 617
Query: 567 AVGNTLVCDGLDEAKVLSWSGE-RFRVVTVDGILLTKAGTMTGGT-TGGMEARSKQWDDK 624
G+T VC D AK ++++ E R VT++G + +G +TGG+ GG + + D
Sbjct: 618 VFGSTFVCKTTDAAKEVAFNREIRTPSVTLEGDVFQPSGLLTGGSRKGGGDLLRQLHDLA 677
Query: 625 KIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEI--------EKRS 676
+ E R ++ SE+E +I+E+Q +++ + + LE K+ + E
Sbjct: 678 EAETKFRAHQKSLSEIE--ANIKELQPLQTKFTDMKAQLELKMYDMSLFLKRAEQNEHHK 735
Query: 677 IEDKLANLRQE----KRTIKEEIGRIKP------DLQK-LKDKIDRRTTDINKLERRINE 725
+ D + L +E + IKE+ G K L+K +KD R + LE+ I
Sbjct: 736 LGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIKDHDKNREGRLKDLEKNIKT 795
Query: 726 ITDRLYRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEY------EQ 779
+ R+ + G N+RE + + V +E+ L +QL L+ Q+ Q
Sbjct: 796 LKARIQASSKDLKGHENVRE---RLVMEQEAVTQEQSYLKSQLTSLRTQISTLASDVGNQ 852
Query: 780 KRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDEC 839
+ V++ K + SLS L+ L K KE D ++ G + ++C
Sbjct: 853 RAKVDAIQKDHDQSLSELK--LIHAKMKECDT----------------QISGSIAEQEKC 894
Query: 840 EKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPM 899
++I + + ++++ + + ++++L+ + I + L
Sbjct: 895 LQKISDMKLDRKKLENEVTRMEMEHKNCSVKVDKLVEKHTWITSEKRL------------ 942
Query: 900 ETDSSSPGPVFDFSQLNRSYLQE---RRPSEREKLEVEFKQKMDALISEIEKTAPNLKAL 956
+ G +DF + +E R +++ LE +K+ A+ KA
Sbjct: 943 ---FGNGGTDYDFESRDPHKAREELERLQTDQSSLEKRVNKKVTAMFE---------KAE 990
Query: 957 DQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQL 1016
D+Y AL+ K+ + E + + K+ + + K++ + N SI
Sbjct: 991 DEYNALMTKKNII----ETDKSKIKKVIEELDEKKKETLKVTWVKVNQDFGSIFSTLLPG 1046
Query: 1017 TRSNTHPL-GGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFS 1075
T S P GGT FL G++ + + +LSGG++++ AL+L+ +
Sbjct: 1047 TMSKLEPPEGGT-----------FLDGLEVRVAFGDVWKQSLSELSGGQRSLLALSLILA 1095
Query: 1076 IHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKD 1135
+ +KP+P +ILDEVDAALD + + I+S Q IV+SLK+
Sbjct: 1096 LLLFKPAPIYILDEVDAALDLSHTQNIGRMIKSHFPHS-------------QFIVVSLKE 1142
Query: 1136 SFYDKAEAL 1144
+ A+ L
Sbjct: 1143 GMFSNADVL 1151
>sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis
thaliana GN=SMC2-1 PE=2 SV=2
Length = 1175
Score = 130 bits (326), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 270/1266 (21%), Positives = 537/1266 (42%), Gaps = 245/1266 (19%)
Query: 10 IHRLELENFKSYKGLQIIGPF-SDFTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQL 67
I + LE FKSY ++ F F AI G NG+GKSN++D+I FVLG+ Q+R L
Sbjct: 3 IKEICLEGFKSYATRTVVSGFDPHFNAITGLNGSGKSNILDSICFVLGITNLQQVRAANL 62
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQ--------LGNE--SELQFTRTITSSGGSEYRID 117
++L+Y K+ + +A V + + LG E E+ TR I G ++Y I+
Sbjct: 63 QELVY----KQGQAGITKATVSVTFDNSERHRSPLGYEEHPEITVTRQIVVGGRNKYLIN 118
Query: 118 GRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREY 177
G++ + S+ + V +FL+ QG + + + P E+ ++LE+ +G+
Sbjct: 119 GKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTR------ 172
Query: 178 EVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKK------E 231
+Y+ K+ L+ +KK+ K + L + L +L+K +
Sbjct: 173 ----------------MYENKKEAALKTLEKKQTKVDEINKLLDHEILPALEKLRKEKSQ 216
Query: 232 HFLWQLFNIEKD----ITKASKDLEAEKRSREEVM------RELEHFEDQKRGKRKELAK 281
+ W N E D A + ++AEK V+ +L + + ++E+ +
Sbjct: 217 YMQWANGNAELDRLRRFCIAFEYVQAEKIRDNAVLGVGEMKAKLGKIDAETEKTQEEIQE 276
Query: 282 YLKEI-AQCEKKIAERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHAN 340
+ K+I A + K A + ++ L +EM+R +SK+ + + L ++E K +
Sbjct: 277 FEKQIKALTQAKEASMGGEVKTLSEKVDSLAQEMTRESSKLNNKEDTLLGEKENVEKIVH 336
Query: 341 DIKELQKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEV 400
I++L+K +++ +++ E + D R L T L E KE G+ K ++E
Sbjct: 337 SIEDLKKSVKERAAAVKKSEEGAADLKQRFQELSTTLEECE--KEHQGVLAGKSSGDEEK 394
Query: 401 LDREQHADLEV-LKNLEANLQQLSNR----EHELDAQEDQMRKRQKNILDAS---GGHKD 452
+Q D ++ + L+QL + E EL ++ Q+ + + ++ G K+
Sbjct: 395 CLEDQLRDAKIAVGTAGTELKQLKTKIEHCEKELKERKSQLMSKLEEAIEVENELGARKN 454
Query: 453 ELTKLKKELRS-------MQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKL 505
++ +KK L S M+ +D + E ++ +E+++R L A +
Sbjct: 455 DVEHVKKALESIPYNEGQMEALEKDRGAELEVVQ----RLEDKVRGLSAQLANFQ--FTY 508
Query: 506 SQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECIK--- 562
S V R V G + L + + A+ V G + VVV+ E+TGK+ ++
Sbjct: 509 SDPVRNFDR--SKVKGVVAKLIKVKDRSSMTALEVTAGGKLYDVVVDSEDTGKQLLQNGA 566
Query: 563 --------------------------------------------------AVLFAVGNTL 572
A+ + G+T
Sbjct: 567 LRRRVTIIPLNKIQSYVVQPRVQQATARLVGKDNAELALSLVGYSDELKNAMEYVFGSTF 626
Query: 573 VCDGLDEAKVLSWSGE-RFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDD-----KKI 626
VC D AK ++++ + R VT++G + +G +TGG+ G R ++ D ++
Sbjct: 627 VCKTTDVAKEVAFNRDIRTPSVTLEGDIFQPSGLLTGGSRKGGGDRLRKLHDLAEAESEL 686
Query: 627 EGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKLANLRQ 686
+G +++ ES+++EL + +Q++ ++ YA++E ++ + L R
Sbjct: 687 QGHQKRLADVESQIKEL---QPLQMKFTDV------------YAQLELKTYDLSLFLKRA 731
Query: 687 EKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVA--NIR 744
E+ + KL + + + ++ + + +I E + Y++ ++V +I+
Sbjct: 732 EQN-----------EHHKLGEAVKKLEEELEEAKSQIKE-KELAYKNCFDAVSKLENSIK 779
Query: 745 EYEENQ-------------LKAAQNVAEERLNLSNQLAKLKYQLEYE----QKRDVESRI 787
++++N+ +KA A + L S++ K K +E E ++ +ES +
Sbjct: 780 DHDKNREGRLKDLEKNIKTIKAQMQAASKDLK-SHENEKEKLVMEEEAMKQEQSSLESHL 838
Query: 788 KKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWE 847
LE+ +STL +++ + + K ++ + + ++ +M+ EC+ +I +
Sbjct: 839 TSLETQISTLTSEVDEQRAKVDALQKIHDESLAELKLIHAKMK-------ECDTQISGFV 891
Query: 848 KQASAATTSLS--KLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDS-- 903
LS KL R+ ++E + R + + C ++ L + ++
Sbjct: 892 TDQEKCLQKLSDMKLERK------KLENEVVRMETDHKDCSVKVDKLVEKHTWIASEKQL 945
Query: 904 -SSPGPVFDFSQLNRSYLQ----ERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQ 958
G +DF + Y+ E+ S++ LE +K+ A+ KA D+
Sbjct: 946 FGKGGTDYDFESCD-PYVAREKLEKLQSDQSGLEKRVNKKVMAMFE---------KAEDE 995
Query: 959 YEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTR 1018
Y AL+ K+ T+ ++ + + +K+ + ++ I+ L
Sbjct: 996 YNALISKKNTI-------ENDKSKITKVIEELDEKKKETLKVTWVKVNQDFGSIFSTL-- 1046
Query: 1019 SNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHS 1078
L GT ED FL G++ + + +LSGG++++ AL+L+ ++
Sbjct: 1047 -----LPGTMAKLEPPEDGNFLDGLEVRVAFGKVWKQSLSELSGGQRSLLALSLILALLL 1101
Query: 1079 YKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFY 1138
+KP+P +ILDEVDAALD + + IR+ Q IV+SLK+ +
Sbjct: 1102 FKPAPLYILDEVDAALDLSHTQNIGRMIRAHFPHS-------------QFIVVSLKEGMF 1148
Query: 1139 DKAEAL 1144
+ A L
Sbjct: 1149 NNANVL 1154
>sp|Q552D9|SMC3_DICDI Structural maintenance of chromosome protein 3 OS=Dictyostelium
discoideum GN=smc3 PE=3 SV=1
Length = 1437
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 288/1251 (23%), Positives = 536/1251 (42%), Gaps = 251/1251 (20%)
Query: 10 IHRLELENFKSYK--GLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLG-VRTGQLRGGQ 66
I + ++ F+SYK G I F + G NGAGKSNL AI F+LG + G +
Sbjct: 3 IKFIFIKGFRSYKDQGFTSITLHPGFNVVTGRNGAGKSNLFAAIRFLLGDLNVGNNSEDR 62
Query: 67 LKDLIYAYDDKEKEQKGRRAFVRLVYQLGNE------SELQFTRTITSSGGSEYRIDGRV 120
LK L+++Y + +V +V+ + +E RT +S E+ I
Sbjct: 63 LK-LLHSYGGNTMQ----TGYVEIVFDNSDHRFPIDKTEFSLRRTFGTS-KDEFSIGNNK 116
Query: 121 VNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGS---DELKREY 177
++ + + G ++V QG + ++A + +L++++G+ +E KRE
Sbjct: 117 LSKADVRNMFEAAGFSSSNPYYIVQQGKINTLALMKDSDRLDMLKEVAGATVYEERKRES 176
Query: 178 E--VLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLW 235
++E E + + L Y +R VL++++K+ Q + + + K+ F
Sbjct: 177 VAIMIESESKSIKIEEFLKYIDERIKVLDKERKELQLYQTQIEM----------KKQFEA 226
Query: 236 QLFNIEKDITKASK-DLEAEK------RSREEVMRELEHFEDQKRGKRKELAKYLKEIAQ 288
+ ++E + + DLE EK S+E ++LE F D+ + + K L EI +
Sbjct: 227 YIIHLEANESNDRILDLEKEKEKYLIHSSKES--KKLERFTDELKKDESKFNKLLSEIKK 284
Query: 289 C--EKKIAER-NNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKEL 345
EK + E+ N DK + +L+ + ++ SK + +LE+ ++E+ + ++L
Sbjct: 285 IDNEKIMVEKLNEVFDKQKAQLVIQQKHFKKLLSK---EQAKLEKLQKEQDLLSGSKEKL 341
Query: 346 QKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQ 405
+K I+ + KLEEL + D +L + L E + +K+ GM K + E++ ++
Sbjct: 342 EKEIEIIKPKLEELIGQEDDIDNKLSSTERNLQELY-VKQ--GMFQFKSKTERDKYLGDE 398
Query: 406 HADLEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKD---ELTK------ 456
+ LE + N QQ + E +++ + Q+++ + D S KD E+ K
Sbjct: 399 SSKLEDIVNQYE--QQAQSLEEDVEDMK-QIQQSKGKQFDNSMASKDKEAEIVKTAELRV 455
Query: 457 --LKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRH-ENERDAKLSQAVETLK 513
LK E ++ + + Q +KS + E N+ + KA+R+ + + LS+ + L
Sbjct: 456 HELKLEKDQIEQRVSSTFQSINEMKSNLTEHRNEWK--KAERNLQTIMNRPLSEGLTRLN 513
Query: 514 RLFQ-----GVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKE--------- 559
++ Q G+HG + +L + + LA+ V G + VVV+ ++T +
Sbjct: 514 QIRQEGKIKGIHGPLVELFDIVEPEATLALEVVGGNGLFHVVVDTDDTASKILEILNTEN 573
Query: 560 ---------------------------C--IKAVLF----------AVGNTLVCDGLDEA 580
C IK + F G TL+C DEA
Sbjct: 574 IGRLSFIPLNRVRTKPPKFPILENDLVCPLIKVISFDPIYTEAMKLVFGKTLICK--DEA 631
Query: 581 KVLSWSGERFR------VVTVDGILLTKAGTMTGGTTGGMEAR------SKQWDDKKIEG 628
+ E+ R +T +G + G +TGG + + K W + +
Sbjct: 632 -----TAEQVRKSSHVDCITFEGDVFHSKGAVTGGYYSKKKLKLSSYQQIKHWRQQYQQL 686
Query: 629 LKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKLANLRQE- 687
+ E+ ESELE+L + ++K I+ E EK I N R E
Sbjct: 687 QTQLTEK-ESELEKL-------------QASLLSIQKTIRTKEDEKNKILSNNDNSRVEL 732
Query: 688 -----KRTIKEEI--------GRIKPDLQKLKDKIDRRTTDINK-LERRINEITDRLYRD 733
+RT+ EI ++K D+Q KD ID IN ++ E L
Sbjct: 733 DKIISERTMYIEILEKKQTILKKLKIDIQNCKDTIDGYQKQINTAFNTKLTEEESNLLLT 792
Query: 734 FSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKL---KYQLEYEQKRDVESRIKKL 790
SES QLK E+++++S+ + KL K Q+ + ++ R+ ++
Sbjct: 793 LSES----------SIQLK------EQKISISSDVMKLQSRKNQMTNQLNQNYGKRLMEI 836
Query: 791 ESSLSTL--ENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEK 848
E + +L EN Q++ K+ ++ + +I +E++ + +E + EI+ +
Sbjct: 837 EGEIKSLNPENSKLQIELKQKEI----DEINIEIDGVREKLESLVQSLNEKDAEIKPIKV 892
Query: 849 QASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGP 908
A S + Q+ + ++E L+++ Q V D + S G
Sbjct: 893 SIDALKQQTSTIADQLVADGKKMESLLAQIQS-----------FNKVRDAKQLRVLSKGD 941
Query: 909 VFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERT 968
F+F +L + Y +++ E K+ K A + + N KA DQ+ + + +
Sbjct: 942 RFNFEEL-KKYNKDQSVEELNKI-----NKSLASLRHV-----NQKANDQFNSFTNQYNS 990
Query: 969 VTEEFEAARKEEKQAADA-----YNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHP 1023
+ AR++E ++A ++ K+ F+ ++ + +++K+L P
Sbjct: 991 L-----EARRDELYESNASIQLLIKTLDNKKDEAIARTFSGVAKNFTQVFKELI-----P 1040
Query: 1024 LGGTAYLNLENE--------DDP--FLHG------IKYTAMPPTKRFRD------MEQLS 1061
GG+A L ++ + +DP + G + +T + F + M QLS
Sbjct: 1041 -GGSAKLVMKRQMDEDEGEGEDPKEWADGETPKGLLTFTGIGIQVSFGEGHEPCSMRQLS 1099
Query: 1062 GGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCE 1112
GG+KT+ ALAL+F++ P+PF++LDE+DAALD+ V+ IR S E
Sbjct: 1100 GGQKTLVALALIFALQRTDPAPFYLLDEIDAALDHNYRVAVSKMIRKHSRE 1150
>sp|P48996|DPY27_CAEEL Chromosome condensation protein dpy-27 OS=Caenorhabditis elegans
GN=dpy-27 PE=1 SV=1
Length = 1469
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 203/874 (23%), Positives = 351/874 (40%), Gaps = 233/874 (26%)
Query: 10 IHRLELENFKSYKGLQIIGPFS-DFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I + +ENFKSY G I+GPF + T I+GPNG+GKSN++DA+ FV G + G++R +L
Sbjct: 93 ILNIYVENFKSYAGKHILGPFHKNLTMILGPNGSGKSNVIDALLFVFGFKAGKIRTKKLS 152
Query: 69 DLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQ--------------FTRTITSSGGSEY 114
LI + + E V +++Q+ + ++ TRTI S+Y
Sbjct: 153 ALINSGGNYES------CSVTIMFQMVKDMPVENYDKYEVLTDNCVCITRTINRENNSKY 206
Query: 115 RIDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIA-----SKNPKELTALLEQISG 169
RID + + + L GI + FL+ QG+VE+IA SKNP E L
Sbjct: 207 RIDDKDASQKDVQELLLRAGIDMTHNRFLILQGEVEAIALMKPTSKNPNEEGML------ 260
Query: 170 SDELKREYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLK 229
E +ED G + + R +LE K + RH + LK +
Sbjct: 261 --------EYIEDIVGTNRFVAPISKLMHRVSLLEHKSS-QYGASVRRH---EGHLKVFE 308
Query: 230 KEHFLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQK--RGKR--KELAKYLKE 285
K + M L F + RG R L +Y +
Sbjct: 309 KAMVIG--------------------------MAYLNTFNNLNYLRGIRVKHNLCRYAET 342
Query: 286 IAQCEKKIAERNNRLDKSQPELLKLNEEMSRINSK---IKSSKKELERKREERRK----- 337
+ + + R L++++ +L+ +E+ + + + S ELE KR + +
Sbjct: 343 MRDAKMSLVTRTGELEENKDIMLEAKDEVRKKETHERSLNSIVTELENKRIDWQSKKNDW 402
Query: 338 HANDIKE---LQKGIQDLTGKLEELNEKSRDGA--------GRLPLLDTQLTEYFQIKEE 386
HA D K L+ QDL ++E +E R+ R+ + QL E+ Q+KE+
Sbjct: 403 HARDAKRKQGLKSCTQDLGKLMKERDEARREKFEIETAPENARISKQNMQL-EWDQLKEQ 461
Query: 387 AGM--KTAKLR----DEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQEDQ----- 435
+ +TA D+K DR +H DLE K L L Q + ELD E +
Sbjct: 462 ENVCQRTATENLIKYDQKSSADRAKHDDLE--KKLSDELLQSMRAKAELDVSESELKDMT 519
Query: 436 --MRKRQKNILDASGGHKDELT---KLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLR 490
M + QK + + G + + + EL ++ + +D + K++ K+ +++ +
Sbjct: 520 IMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLKFDKAVEKLPHLKSTEQ 579
Query: 491 ELKADRHE-----------------NERDAKLSQAVETLKRLFQGVHGRMTDLCRPTQKK 533
L++ ++E ++ AKL + E LF G GR+ DL K
Sbjct: 580 LLRSKKYELDQEVIEASNTQEVTYRHQATAKLHELKEA--GLFPGFKGRLGDLAS-IPIK 636
Query: 534 YNLAVTVAMGKFMDAVVVE-----------------------------DENTGK------ 558
++ A++ +D VV+ D +T
Sbjct: 637 FDTAISTVFFAQLDYHVVQTSDECRIGIGFCHEYKLPRTTFVFLDHLKDTDTSGMDSTMK 696
Query: 559 ----------ECI-----KAVLFAVGNTLVCDGLDEAKVLS--WSGERFRVVTVDGILLT 601
C+ + F + + LV D L+EA + + G R R T++G +L
Sbjct: 697 FPAERLFDKIHCVNPEIRREFYFLIHDILVVDSLEEATRIDKKYPG-RHRYCTLNGSILN 755
Query: 602 KAGTMTGG---TTGGMEARSKQWDDKKIEGLKR--------KKEQYESELEE-------- 642
++G +TGG TTG R + ++ + G+K+ +E++ LE
Sbjct: 756 RSGALTGGGKPTTG----RIRNDNNPNMSGVKKVDLSKLRAAQEKHNHALEAHLKLQLKQ 811
Query: 643 ---------------------LGSIREMQLRESETSGKISGLEKK-IQYAEIEKRSIEDK 680
+ S +E + R +E I+ E++ + Y E+ +++K
Sbjct: 812 EEIRADNGPIIKQLEIRKRELIMSTKEQKTRIAELKSSIAAHERRMVNYREVTVEDLDEK 871
Query: 681 LANLRQEKRTIKEE---IGRIKPDLQKLKDKIDR 711
A + KR ++E +IK +++ K K+DR
Sbjct: 872 RAQIADLKRQVEESQKSSAKIKQQIEQYKRKMDR 905
Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 105/192 (54%), Gaps = 23/192 (11%)
Query: 961 ALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSN 1020
+LL E T ++F K ++ N ++ R+ F EA + ++ +Y+ +T
Sbjct: 1152 SLLMNEVTSAKKFSDKLKAHREK---LNELRMARFNEFSEALAFLGTTTQMLYQLITN-- 1206
Query: 1021 THPLGGTAYLNLENE---DDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIH 1077
GG A L E DPF GIK++ P K ++ +E LSGGEKT+A+L +F++H
Sbjct: 1207 ----GGDASLKFVEEGKSTDPFDGGIKFSVRPAKKSWKLIENLSGGEKTLASLCFVFAMH 1262
Query: 1078 SYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSF 1137
Y+P+P +++DE+DAALD NV+ +A +I K E TR Q I+ISL++
Sbjct: 1263 HYRPTPLYVMDEIDAALDLNNVSLIANYI--KHSERTRNA---------QFIIISLRNQM 1311
Query: 1138 YDKAEALVGVYR 1149
++ L+G+Y+
Sbjct: 1312 FEVGNRLLGIYK 1323
>sp|P51834|SMC_BACSU Chromosome partition protein Smc OS=Bacillus subtilis (strain 168)
GN=smc PE=1 SV=3
Length = 1186
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 273/603 (45%), Gaps = 83/603 (13%)
Query: 568 VGNTLVCDGLDEAKVLS-WSGERFRVVTVDGILLTKAGTMTGGTT----GGMEARSKQWD 622
+G L+ + L A L+ G R+R+VT++G ++ G+MTGG + RS++ +
Sbjct: 621 LGTVLITEDLKGANELAKLLGHRYRIVTLEGDVVNPGGSMTGGAVKKKNNSLLGRSRELE 680
Query: 623 D--KKIEGLKRKKEQYESELEEL-GSIREMQ-----LRESETSGKISGLEKKIQYAEIE- 673
D K++ ++ K E E++ L SI++M+ LRE+ ++ + K Q E++
Sbjct: 681 DVTKRLAEMEEKTALLEQEVKTLKHSIQDMEKKLADLRETGEGLRLKQQDVKGQLYELQV 740
Query: 674 -KRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYR 732
+++I L QEK + E K +KL++++ + + +LE I+ +T +
Sbjct: 741 AEKNINTHLELYDQEKSALSESDEERKVRKRKLEEELSAVSEKMKQLEEDIDRLTKQKQT 800
Query: 733 DFSESVGVANIREYEENQLKAAQNVAEERL-NLSNQLAKLKYQLEYEQKRDVESRIKKLE 791
S ++N E +LK A E+ + LA+LK +L + E +K+ +
Sbjct: 801 QSSTKESLSN----ELTELKIAAAKKEQACKGEEDNLARLKKEL-----TETELALKEAK 851
Query: 792 SSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMR-------GWKSNSDECEKEIQ 844
LS L +++ E ++ A + D T+ E + + D E+E++
Sbjct: 852 EDLSFLTSEMSSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELK 911
Query: 845 EWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSS 904
E ++ TT L ++ E +++ L+ Q + E+ L
Sbjct: 912 EMKRLYKQKTTLLKDEEVKLGRMEVELDNLL---QYLREEYSL----------------- 951
Query: 905 SPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLE 964
F Y E P E K + K+ L E E NL ++D++E + E
Sbjct: 952 ------SFEGAKEKYQLETDPEEARK-----RVKLIKLAIE-ELGTVNLGSIDEFERVNE 999
Query: 965 KERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPL 1024
+ + ++E+ E + + + ++ F + F I S D++++ L
Sbjct: 1000 RYKFLSEQKEDLTEAKNTLFQVIEEMDEEMTKRFNDTFVQIRSHFDQVFRSLFG------ 1053
Query: 1025 GGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPF 1084
GG A L L + +D G++ A PP K+ +++ LSGGE+ + A+ALLFSI +P PF
Sbjct: 1054 GGRAELRLTDPNDLLHSGVEIIAQPPGKKLQNLNLLSGGERALTAIALLFSILKVRPVPF 1113
Query: 1085 FILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEAL 1144
+LDEV+AALD NV + A +++ S + Q IVI+ + ++A+ L
Sbjct: 1114 CVLDEVEAALDEANVFRFAQYLKKYSSDT-------------QFIVITHRKGTMEEADVL 1160
Query: 1145 VGV 1147
GV
Sbjct: 1161 YGV 1163
>sp|Q7NG51|SMC_GLOVI Chromosome partition protein Smc OS=Gloeobacter violaceus (strain PCC
7421) GN=smc PE=3 SV=1
Length = 1165
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 946 IEKTAP-NLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNH 1004
+E P N+ A+++Y+ E++ ++E+ ++E + + FM+AF+
Sbjct: 963 LEALEPVNMLAIEEYDRTAERQGELSEKLATLQRERSELLLRIEDCDTLKRSAFMQAFDA 1022
Query: 1005 ISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGE 1064
+++ ++ +L+ G +L LE+ D+PF G+ A P K+ R +E +SGGE
Sbjct: 1023 VNTHFQSLFAELS-------DGDGHLALEDPDNPFAGGLTLVAHPRGKQVRRLEAMSGGE 1075
Query: 1065 KTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGN 1124
K++ AL+ +F++ Y+PSPF+ DEVD LD NV ++A +R ++ N
Sbjct: 1076 KSLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAKMVRQQA-------------N 1122
Query: 1125 GFQSIVISLKDSFYDKAEALVGV 1147
Q +V+SL+ ++A+ +GV
Sbjct: 1123 STQFLVVSLRRPMIERADRAIGV 1145
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 123/250 (49%), Gaps = 18/250 (7%)
Query: 13 LELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQLKDLI 71
LE+E FKS+ I FT + GPNG+GKSN++DA+ F LG+ T + +R +L DLI
Sbjct: 6 LEIERFKSFGPYTRIPLLEGFTVVSGPNGSGKSNIIDALLFALGLSTSRGMRAEKLSDLI 65
Query: 72 YAYDDKEKEQKGRRAFVRLVYQL---GNESELQFTRTITSSG---GSEYRIDGRVVNWDE 125
+ + KG A V + + L EL R + +G S Y+++G +
Sbjct: 66 H-----QGAAKGEVA-VTVTFALDAAAGGGELTVCRRLKVNGPNSTSSYQLNGSPCTLTD 119
Query: 126 YNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKG 185
+ +L I + N +V QGDV I + +E ++++++G E R+ E E G
Sbjct: 120 LHEELARHHIYPEGYN-VVLQGDVTGIIAMPARERREIIDELAGVAEFDRKIEAARRELG 178
Query: 186 KAEEKSALVYQKKRTVV--LERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKD 243
+ E +S + ++ +ER QK+ K AE + +L+ +L L L + ++E
Sbjct: 179 EVEVRSDRIQAVVSELLEQMERLQKERAK--AEEYRKLRAELGELALWEHLLSVRSLEAQ 236
Query: 244 ITKASKDLEA 253
I + + L A
Sbjct: 237 IAQITSQLAA 246
>sp|P47037|SMC3_YEAST Structural maintenance of chromosomes protein 3 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC3 PE=1 SV=1
Length = 1230
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 249/1228 (20%), Positives = 510/1228 (41%), Gaps = 181/1228 (14%)
Query: 10 IHRLELENFKSYKGLQIIGPFSDF-TAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
I R+ ++ FK+Y+ II FS IIG NG+GKSN AI FVL L+ + +
Sbjct: 3 IKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQ 62
Query: 69 DLIYAYDDKEKEQKGRRAFVRLVYQLGNESELQFTRTITSSGGSE-------------YR 115
LI+ + A V +V+ + S + + S G E Y+
Sbjct: 63 GLIH----QGSGGSVMSASVEIVFHDPDHSMI-LPSGVLSRGDDEVTIRRTVGLKKDDYQ 117
Query: 116 IDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKR 175
++ R V + L + G + +V QG + ++ + KE LLE + G+ +
Sbjct: 118 LNDRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEV 177
Query: 176 EYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLW 235
+ + + + E+K + ++ + + + +++++E E++ L+ K + +
Sbjct: 178 KLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDR 237
Query: 236 QLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAE 295
+L + + + D S E+ ++EL+ ED + + K+++ E +
Sbjct: 238 ELNEVINQMERLDGDYNNTVYSSEQYIQELDKREDM-------IDQVSKKLSSIEASLKI 290
Query: 296 RNNRLDKSQPEL--LKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLT 353
+N D Q +L +++++++ +N KIK ++++E E+R + +KE++ I+
Sbjct: 291 KN-ATDLQQAKLRESEISQKLTNVNVKIKDVQQQIESNEEQRNLDSATLKEIKSIIEQRK 349
Query: 354 GKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTA-----KLRDEKEVLDREQHAD 408
KL ++ + ++ + QL Q + + +K K +DE+ D H++
Sbjct: 350 QKLSKILPRYQELTKEEAMYKLQLASLQQKQRDLILKKGEYARFKSKDER---DTWIHSE 406
Query: 409 LEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNI-------LDASGG--HKDELTKLKK 459
+E LK +++Q L+ E +L +RK+ I +D+ G K +L
Sbjct: 407 IEELK---SSIQNLNELESQLQMDRTSLRKQYSAIDEEIEELIDSINGPDTKGQLEDFDS 463
Query: 460 ELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAK-------------LS 506
EL ++ K +S + L K +++ L L +D ++N+R+ +
Sbjct: 464 ELIHLKQKLSESLDTRKELWRKEQKLQTVLETLLSDVNQNQRNVNETMSRSLANGIINVK 523
Query: 507 QAVETLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKECI----- 561
+ E LK + V G + +L + KY V G + +VV+ E T +
Sbjct: 524 EITEKLKISPESVFGTLGELIK-VNDKYKTCAEVIGGNSLFHIVVDTEETATLIMNELYR 582
Query: 562 ----------------------------------------------KAVLFAVGNTLVCD 575
KAV G T+V
Sbjct: 583 MKGGRVTFIPLNRLSLDSDVKFPSNTTTQIQFTPLIKKIKYEPRFEKAVKHVFGKTIVVK 642
Query: 576 GLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQ 635
L + L+ + +T+DG K G +TGG + K+ + ++ L + Q
Sbjct: 643 DLGQGLKLA-KKHKLNAITLDGDRADKRGVLTGGYLD----QHKRTRLESLKNLNESRSQ 697
Query: 636 YESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKLANLRQEKRTIKEEI 695
++ LEEL +R +L + +T KI + I+ ++ S+ + R T K E
Sbjct: 698 HKKILEELDFVRN-ELNDIDT--KIDQVNGNIRKVSNDRESVLTNIEVYRTSLNTKKNEK 754
Query: 696 GRIKPDLQKLKDKIDRRTTDINKLERRINEITDRLYRDFSESVGVANIREYEE--NQLKA 753
++ L + K+++ T+ + ++N + L ++F + E ++ A
Sbjct: 755 LILEESLNAIILKLEKLNTNRTFAQEKLNTFENDLLQEFDSELSKEEKERLESLTKEISA 814
Query: 754 AQN---VAEERL-NLSNQLAKLKYQLE---YEQKRDVESRIKKL-ESSLSTLENDLKQVK 805
A N + + L ++ + L +LE Q+ D+ES++ ++ ++ + L+++LK+++
Sbjct: 815 AHNKLNITSDALEGITTTIDSLNAELESKLIPQENDLESKMSEVGDAFIFGLQDELKELQ 874
Query: 806 KKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQIN 865
++ V+ E A ++ + E+ + +K +++ Q L + +
Sbjct: 875 LEKESVEKQHENAVLELGTVQREIESLIAEETNNKKLLEKANNQQRLLLKKLDNFQKSVE 934
Query: 866 SKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQLNRSYLQERRP 925
+ L++R++E+ ++ E +LP ED + V DFS + L +R
Sbjct: 935 KTMIKKTTLVTRREELQQRIR-EIGLLP--EDAL---------VNDFSDITSDQLLQRL- 981
Query: 926 SEREKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAAD 985
M+ IS ++ N +A + ++ E+ + + E + + D
Sbjct: 982 -----------NDMNTEISGLKNV--NKRAFENFKKFNERRKDLAERASELDESKDSIQD 1028
Query: 986 AYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPL------------GGTAYLNLE 1033
+KQ++ F +S + + ++++L T L + ++++
Sbjct: 1029 LIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHRKNDNANDHDESIDVDMD 1088
Query: 1034 NEDDPFLHG----IKYTAMPPTKRFRD-------MEQLSGGEKTVAALALLFSIHSYKPS 1082
E + +G I YT + + F +EQLSGG+KTV A+AL+ +I P+
Sbjct: 1089 AESNESQNGKDSEIMYTGVSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPA 1148
Query: 1083 PFFILDEVDAALDNLNVAKVAGFIRSKS 1110
F++ DE+DAALD VA ++ S
Sbjct: 1149 SFYLFDEIDAALDKQYRTAVATLLKELS 1176
>sp|Q5N0D2|SMC_SYNP6 Chromosome partition protein Smc OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=smc PE=3 SV=2
Length = 1195
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 109/217 (50%), Gaps = 27/217 (12%)
Query: 935 FKQKMDALISEIEKTAP-NLKALDQYE---ALLEKERTVTEEFEAARKEEKQAADAYNSV 990
+ ++ +L I+ P N+ AL++YE A LE+ EA R E + + ++
Sbjct: 986 LQHELRSLAKRIQAMEPVNMLALEEYERTQARLEELSEKLTTIEAERTELLLRIENFTTL 1045
Query: 991 KQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPP 1050
+++ FME+F I + I+ L+ G L L+N +DPF G+ A P
Sbjct: 1046 RRR---AFMESFEAIDRNFQEIFAHLS-------DGDGSLQLDNPEDPFSSGLNLIAHPK 1095
Query: 1051 TKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS 1110
K R + +SGGEK++ AL+ +F++ Y+PSPF+ LDEVD+ LD NV ++A IR ++
Sbjct: 1096 GKPVRRLASMSGGEKSLTALSFIFALQRYRPSPFYALDEVDSFLDGANVERLARVIRQQA 1155
Query: 1111 CEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
Q IV+S + + AE +GV
Sbjct: 1156 -------------QAAQFIVVSHRRPMIEAAERTIGV 1179
>sp|O95347|SMC2_HUMAN Structural maintenance of chromosomes protein 2 OS=Homo sapiens
GN=SMC2 PE=1 SV=2
Length = 1197
Score = 102 bits (254), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 175/692 (25%), Positives = 284/692 (41%), Gaps = 118/692 (17%)
Query: 10 IHRLELENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQL 67
I + LE FKSY + F F AI G NG+GKSN++D+I F+LG+ Q+R L
Sbjct: 3 IKSIILEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNL 62
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQ--------LGNE--SELQFTRTITSSGGSEYRID 117
+DL+Y K + +A V + + LG E E+ TR + G ++Y I+
Sbjct: 63 QDLVY----KNGQAGITKASVSITFDNSDKKQSPLGFEVHDEITVTRQVVIGGRNKYLIN 118
Query: 118 GRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREY 177
G N S+G+ V +FL+ QG + + + P E+ +++E+ +G+ R Y
Sbjct: 119 GVNANNTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILSMIEEAAGT----RMY 174
Query: 178 EVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQ-----LKSLKKEH 232
E + K EK ++ +T++ E QK + ER L+ Q ++ L + +
Sbjct: 175 EYKKIAAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQKVMREIEHLSRLY 234
Query: 233 FLWQLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKK 292
+Q E + + RS E EL+ +D+ ++EL++ K+I +
Sbjct: 235 IAYQFLLAE----------DTKVRSAE----ELKEMQDKVIKLQEELSENDKKIKALNHE 280
Query: 293 IAERNNRLDKSQPELLKLNE----EMSRINSKIKSS----KKEL---ERKREERRKH-AN 340
I E R DK +L+ E E R+N+K +S+ KK L E KR+E K+
Sbjct: 281 IEELEKRKDKETGGILRSLEDALAEAQRVNTKSQSAFDLKKKNLACEESKRKELEKNMVE 340
Query: 341 DIKEL---QKGIQDLTGKLEELNEKSRDGAGRLPLLDTQLTEY---FQIKEEAGMKT--A 392
D K L +K ++ +T L L E S A L E+ T
Sbjct: 341 DSKTLAAKEKEVKKITDGLHALQEASNKDAEALAAAQQHFNAVSAGLSSNEDGAEATLAG 400
Query: 393 KLRDEKEVLDREQHADLEVLKNLEANLQQLSNREHELDAQEDQMRKRQKNILDASGGHKD 452
++ K + + Q + L+ Q+L N++ E+ + RK Q+ L+A K+
Sbjct: 401 QMMACKNDISKAQTEAKQAQMKLKHAQQELKNKQAEVKKMDSGYRKDQE-ALEAVKRLKE 459
Query: 453 ELTKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKADRHENERDAKLSQAVETL 512
+L K+L ++K +K L IG ++ L A R N R A +
Sbjct: 460 KLEAEMKKLNYEENKEESLLEKRRQLSRDIGRLKETYEALLA-RFPNLRFA-YKDPEKNW 517
Query: 513 KRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDENTGKE------------- 559
R V G + L A+ + G+ + VVV+ E TGK+
Sbjct: 518 NR--NCVKGLVASLISVKDTSATTALELVAGERLYNVVVDTEVTGKKLLERGELKRRYTI 575
Query: 560 ---------CI-------------------------------KAVLFAVGNTLVCDGLDE 579
CI KA+ F G T VCD +D
Sbjct: 576 IPLNKISARCIAPETLRVAQNLVGPDNVHVALSLVEYKPELQKAMEFVFGTTFVCDNMDN 635
Query: 580 AKVLSWSGERF-RVVTVDGILLTKAGTMTGGT 610
AK +++ R VT+ G + GT++GG
Sbjct: 636 AKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGA 667
>sp|Q88WJ9|SMC_LACPL Chromosome partition protein Smc OS=Lactobacillus plantarum (strain
ATCC BAA-793 / NCIMB 8826 / WCFS1) GN=smc PE=3 SV=1
Length = 1185
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 140/618 (22%), Positives = 270/618 (43%), Gaps = 111/618 (17%)
Query: 566 FAVGNTLVCDGLDEAKVLSWSGERFR--VVTVDGILLTKAGTMTGGTTGGMEARSKQWDD 623
+ +G T + D LD A +S S RFR +VT+DG + +G +TGG T + DD
Sbjct: 620 YLLGTTAIVDTLDHAMAISRS-RRFRCKLVTIDGETIAASGAITGGAT--------RHDD 670
Query: 624 KKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYAEIEKRSIEDKLAN 683
GL L++ +++ KI+ ++Q E + E LA+
Sbjct: 671 N---GL---------------------LQQQQSAEKIAANVAQMQS---ELVTYEQGLAD 703
Query: 684 LRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDI-------NKLERRINEIT--------D 728
L++ + + ++ + L +LKD++ + + +L R++ +T D
Sbjct: 704 LKKANQDLTVQVETTRQQLSELKDRLSQTQAQLQAAQSEQTQLSRQVKALTYEQQQTQAD 763
Query: 729 RLYRDF------SESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEY----- 777
Y D +++ A +++Y++ Q + Q KL+ Q E
Sbjct: 764 DSYEDLVARNQQAQAANAAKLKDYQDQMKTVQQQQTDYESYQQTQTTKLQAQREQLITLQ 823
Query: 778 EQKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSD 837
E + + ++++ +++L+ E KQ++ +K+ + + ++ K+
Sbjct: 824 EHVKQTQRQLEQCQATLAQNEETKKQIQADLTAIKTTLASQQMSVAERDTVLKTAKAKQA 883
Query: 838 ECEKEIQEWEKQASAATTSLSKLNRQI---NSKEAQIEQLISRKQEIMEKCELECIVLPT 894
E++ + E+Q L+ LN Q+ ++++ +++QL + + + EL L
Sbjct: 884 AVEEQRKTCEQQ-------LATLNDQVEELSTQQVRLQQLAAAATDDYRRLELSQTKLTG 936
Query: 895 VEDPMETDSSSPGPV-FDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAPNL 953
D D + + +Q + S L P+ E+L++ K+ +D E NL
Sbjct: 937 EVDHATADLAEKYQLTVAAAQADVSGL--ALPAITEQLKL-LKRGLD------EIGTVNL 987
Query: 954 KALDQYEALLEK----ERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSI 1009
A+D++E + E+ ++ EA + AD +V + F AF+ ++S
Sbjct: 988 GAIDEFERVKERFDFLNNQASDLTEAKEHLLQTMADLDTTVATR----FKTAFDQVASEF 1043
Query: 1010 DRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAA 1069
I++Q+ GG A L L + + G+ A PP K+F+ + LSGGE+ + A
Sbjct: 1044 STIFEQMFG------GGKAELILTDPEHLLTSGVDIMAQPPGKKFQRLSLLSGGERALTA 1097
Query: 1070 LALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSI 1129
+ LLF+I + +P PF ILDE +AALD+ NV + + ++ D G Q +
Sbjct: 1098 ITLLFAILAVRPVPFSILDEAEAALDDANVDRFSQYLN-------------DFQTGTQFV 1144
Query: 1130 VISLKDSFYDKAEALVGV 1147
+I+ + A+ L GV
Sbjct: 1145 IITHRKGTMMHADVLYGV 1162
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 9 KIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQL 67
++ LE+ FKS+ I + T I+GPNG+GKSN+++AI +VLG + + LRG ++
Sbjct: 2 QLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQAVKSLRGTKM 61
Query: 68 KDLIYAYDDKEKEQKGRRA---------FVRLVYQLGNESELQFTRTITSSGGSEYRIDG 118
D+I+A K + F+ L Y +E+ TR + +G S+Y I+
Sbjct: 62 TDVIFAGSANRKPLNMAKVTITFDNSDHFLPLDY-----AEVSITRKLFRNGDSDYLINN 116
Query: 119 RVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISG--------- 169
+ + + G L K ++ QG VE++ + P+E +++E ++G
Sbjct: 117 QSCRLKDITNLMIDTG-LGKDSFSVISQGRVEAVFNAKPEERRSIIEDVAGVLKYKKDKF 175
Query: 170 ---------SDELKREYEV---LEDEKGKAEEKSALV--YQKKR 199
+D L R ++ L +KG EE+++L YQ ++
Sbjct: 176 TTENKLAETTDYLDRVNDIIAELNQQKGPLEEQASLARDYQDQK 219
>sp|Q8KBS6|SMC_CHLTE Chromosome partition protein Smc OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=smc PE=3 SV=1
Length = 1183
Score = 100 bits (250), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 146/621 (23%), Positives = 266/621 (42%), Gaps = 96/621 (15%)
Query: 556 TGKECIKAVLFAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTTGGME 615
T E KA+ + + V LD A+ L +T G T+ G + GG+ G E
Sbjct: 605 TPAELSKALNLLLQHCYVVADLDAAEQLGKKHPEALFITEKGEKFTRRGMLYGGSAKGGE 664
Query: 616 A----RSKQWD--DKKIEGLKRKKEQYESEL----EELGSIREMQLRES--ETSGKISGL 663
+ + + D K++ G+ + E+ L +E +I +++ + S +IS L
Sbjct: 665 SVRLGKKAERDRLQKQMAGMAETIAEAENALAVLRKEFSAIDTERVKRAAASISQEISAL 724
Query: 664 EKKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
EK++ E E+RS D++A+ +E+ + + + +L+K + + R +I ++++
Sbjct: 725 EKRLARLEAEERSGADQIAHADRERTALIASMQSVLDELEKTQPETLRIEAEIETAQQKV 784
Query: 724 NEITDRLYRDFSESVGV-----ANIREYEENQLKA------AQNVAEERLNLSNQLAKLK 772
N + + L S S + A Y + QL A + + LS+++ ++
Sbjct: 785 NVMQEELSAGESRSRALHAELQAQQGRYRDAQLDLEKHRFRASACQQTIVTLSDEIEGMQ 844
Query: 773 YQLEYEQKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGW 832
+Q I + E ++ L + Q + + + + R
Sbjct: 845 HQ------------IARAEKEVAELGQSIAQATAEHEQAVVVSARQQEALNELESSYRDL 892
Query: 833 KSNSDECEKEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQE-IMEKCELECIV 891
++ + + +++ ++ + L+ + N+++A++EQ I+ Q +ME+ +E +
Sbjct: 893 QTKNHDTLSNLRDLRRKHDLSQQMLA----EFNNRKAKLEQEIAHLQATVMERYGVELEM 948
Query: 892 LPTVEDPMETDSSSPGPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAP 951
+P + P FD + + RE+L KQK +
Sbjct: 949 MP---------AHVPEG-FDVA------------ASRERLAYLQKQKE-------QFGGV 979
Query: 952 NLKALDQYEALLEKERTVTEEFEAARKE-----EKQAADAYNSVKQKRYGLFMEAFNHIS 1006
N AL++YE+ EKER +F A+KE EKQ + + + F E FN +
Sbjct: 980 NELALEEYES--EKERL---DFLTAQKEDLVSAEKQLRETIEEINRTALEKFRETFNQVR 1034
Query: 1007 SSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKT 1066
+ RI+ L P L +++DP I+ A P K+ +EQLSGGEK
Sbjct: 1035 KNFIRIFHDLF----DPEDEVDLLITTSDEDPLEAHIQIVAKPRGKKPLAIEQLSGGEKA 1090
Query: 1067 VAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGF 1126
+ AL+LLF+I+ KPSPF ILDEVDA LD+ NV + ++ N
Sbjct: 1091 LTALSLLFAIYLVKPSPFCILDEVDAPLDDANVGRFIKLLKKFE-------------NNT 1137
Query: 1127 QSIVISLKDSFYDKAEALVGV 1147
Q I+++ +AL GV
Sbjct: 1138 QFIIVTHNKKSMASCQALYGV 1158
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 10 IHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLG-VRTGQLRGGQLK 68
+ ++EL FKS+ I TAI+GPNG GK+N++DAI +VLG ++ LR +++
Sbjct: 3 LSKIELFGFKSFAHRVRIHFDKGLTAIVGPNGCGKTNVVDAIRWVLGEQKSMLLRSPKME 62
Query: 69 DLIY 72
++I+
Sbjct: 63 NIIF 66
>sp|P73340|SMC_SYNY3 Chromosome partition protein Smc OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=smc PE=3 SV=1
Length = 1200
Score = 99.8 bits (247), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 164/355 (46%), Gaps = 48/355 (13%)
Query: 796 TLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEKEIQEWEKQASAATT 855
TL + +Q+K ++ A +T + + E++ K D E ++ + Q
Sbjct: 876 TLAQEQEQLKIALAEMNGAIQTTEAQLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQW 935
Query: 856 SLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQL 915
KL Q N +E Q + +++ Q +E E + + P E P+ D DF+ +
Sbjct: 936 QWEKL--QTNQQEYQ--ENLTQLQTQLEALE-QDLPDPWPEIPLLQDRDEAN--LDFANI 988
Query: 916 NRSYLQERRPSER---EKLEVEFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEE 972
L+E S R ++LE M AL E EKT L L EK +T+ E
Sbjct: 989 ----LEELERSIRNGQKRLEAMEPVNMLAL-QEYEKTEARLGELS------EKLQTIAGE 1037
Query: 973 FEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNL 1032
R E + + +++++ F +AF+ ++ + I+ +L+ G YL L
Sbjct: 1038 ----RTELLLRIENFTTLRRRS---FQDAFDAVNKNFQIIFAELS-------DGDGYLQL 1083
Query: 1033 ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA 1092
++ +DPF G+ A P K R + +SGGEK++ AL+ +F++ Y+PSPF+ DEVD
Sbjct: 1084 DDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPFYGFDEVDM 1143
Query: 1093 ALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
LD NV K++ +R ++ + Q IV+SL+ + AE +GV
Sbjct: 1144 FLDGANVEKLSKMVRKQAQQA-------------QFIVVSLRRPMIEAAERTIGV 1185
>sp|Q81ZL2|SMC_COXBU Chromosome partition protein Smc OS=Coxiella burnetii (strain RSA 493
/ Nine Mile phase I) GN=smc PE=3 SV=1
Length = 1169
Score = 98.2 bits (243), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 110/214 (51%), Gaps = 21/214 (9%)
Query: 935 FKQKMDALISEIEKTAP-NLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQK 993
+++K+D L+ I++ P NL A+++YE++ E++ + ++ + + +A + + ++
Sbjct: 952 WQEKLDQLVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEILKNAIHKIDRE 1011
Query: 994 RYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKR 1053
F E ++ ++ ++ ++ GG A L + + D G+ A PP KR
Sbjct: 1012 TRAKFQETYDQVNQQFQSLFPRIFG------GGRATLEM-TDTDLLTAGVIVRAQPPGKR 1064
Query: 1054 FRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEG 1113
+ LSGGEK + A+AL+FS+ P+PF ILDEVDA LD++NV + ++ S E
Sbjct: 1065 NVTIHMLSGGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGRFCQLVKEMSKE- 1123
Query: 1114 TRGNQDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
Q +VIS + A+ L+GV
Sbjct: 1124 ------------VQFLVISHNKVTIEMADYLMGV 1145
>sp|Q7ZAK1|SMC_THEEB Chromosome partition protein Smc OS=Thermosynechococcus elongatus
(strain BP-1) GN=smc PE=3 SV=1
Length = 1168
Score = 97.8 bits (242), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 99/209 (47%), Gaps = 41/209 (19%)
Query: 943 ISEIEKTAPNLKALDQYEALLEKERT----VTEEFEAARKEEKQAADAYNSVKQKRYGLF 998
I E E+T LK L + A+L ERT E F R + F
Sbjct: 978 IQEFEETQARLKELQEKLAVLAAERTEILLRIENFTTLRHQS-----------------F 1020
Query: 999 MEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDME 1058
EAF+ I+++ I+ L+ G YL LE+ +DPF G+ A P K + +
Sbjct: 1021 REAFDAINANFQTIFATLS-------DGDGYLQLESPEDPFAGGLNLVAHPKGKPVQRLA 1073
Query: 1059 QLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQ 1118
+SGGEK++ AL+ +F++ Y+PSPF+ DEVD LD NV ++A I+ +S +
Sbjct: 1074 SMSGGEKSLTALSFIFALQRYRPSPFYAFDEVDMFLDGANVERLAKMIQQQSQQAQ---- 1129
Query: 1119 DADEGNGFQSIVISLKDSFYDKAEALVGV 1147
IV+SL+ + A+ +GV
Sbjct: 1130 ---------FIVVSLRRPMIEAAQRTIGV 1149
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 10 IHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQLK 68
I RLEL NFKS+ G +I FT I GPNG+GKSNL+DA+ F LG+ + +R +L
Sbjct: 3 IKRLELTNFKSFGGTTVIPLLPGFTVISGPNGSGKSNLLDALLFALGLAGSKGMRAERLP 62
Query: 69 DLIYAYDDKEKEQKGRRAF---VRLVYQLGNESELQFTR--TITSSGG--SEYRIDGRVV 121
DL+ + + ++G V + + L E+E + TR +T G S Y ++ +
Sbjct: 63 DLV----NHSQTRRGHSVVETRVTVTFALDAETEWRVTRRLRVTKQGSYTSTYAVNDQPC 118
Query: 122 NWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKR 175
+E + +L++ I + N +V QGDV S+ S N K ++++++G + R
Sbjct: 119 TLNELHDQLQAFCIYPQGYN-VVLQGDVTSMISMNAKARREIIDELAGVADFDR 171
>sp|Q00737|SUDA_EMENI Chromosome segregation protein sudA OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=sudA PE=2 SV=3
Length = 1215
Score = 97.4 bits (241), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 275/1290 (21%), Positives = 524/1290 (40%), Gaps = 255/1290 (19%)
Query: 10 IHRLELENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGGQLK 68
+ ++ ++ FKSYK +I PFS I+G NG+GKSN AI FVL L + +
Sbjct: 3 VKQIIIQGFKSYKDQTVIEPFSPKHNVIVGRNGSGKSNFFAAIRFVLSDAYTHLGREERQ 62
Query: 69 DLIYAYDDKEKEQKGR---RAFVRLVYQLGNE------SELQFTRTITSSGGSEYRIDGR 119
L++ E G A+V +++ +E EL RTI EY +D +
Sbjct: 63 ALLH-------EGSGSAVMSAYVEIIFDNSDERFPTGKPELVLRRTI-GLKKDEYTLDRK 114
Query: 120 VVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEV 179
++ L S G ++V QG V ++ + E LL++++G+
Sbjct: 115 NATKNDVMNLLESAGFSRSNPYYIVPQGRVTALTNMKDSERLNLLKEVAGTQ-------- 166
Query: 180 LEDEKGKAEEKSALVYQKKRT----VVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLW 235
VY+ +R ++ E K+E+ +E + ++L L++E
Sbjct: 167 --------------VYEARRAESLKIMHETNSKREKIDELLDF--INERLAELEEEKDEL 210
Query: 236 QLFNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRG--------------KRKELAK 281
+ F EKD + + R ++E+ L+ E+Q++ KE+A+
Sbjct: 211 RNFQ-EKDKERRCLEYTIYSREQQEIASFLDSLEEQRQTGVEDTDINRDRFIQGEKEMAQ 269
Query: 282 YLKEIAQCEKKIAERNNRLDKSQ--PELLKLNEEMSRINSKIKSSKKELERKREERRKHA 339
EIA+C+++I ++DK+Q E + ++ ++++ + KS +E + +H
Sbjct: 270 VDAEIAECKQQI--EFLKVDKAQLEDERREASKALAQVELQAKSLSDNQAAAQESKARHD 327
Query: 340 NDIKELQKGIQDLTGKLEEL-----NEKSRDGAGRLPLLDTQLT-----------EYFQI 383
+K +Q I++ +L+EL + K + A R L + + F+
Sbjct: 328 ESLKAVQSAIEERQTELKELVPRFISAKDAEDAARAKLTEAETARQRLYAKQGRNSRFKN 387
Query: 384 KEE------AGMK--TAKLRDEKEVLDREQHADLEVLKNLEANLQQLSNR-EHELDAQED 434
K E A +K A + + VL + Q D+ ++N A L+ + R ++D + D
Sbjct: 388 KSERDKWLQAEIKNNNASISSVQSVLSQTQE-DINDIENDIALLEPETERLRQQIDGRGD 446
Query: 435 QMRKRQKNILDASGGHKDELTKLKKELR------SMQDKHRDSRQKYENLKSKIGEIENQ 488
++ ++ + A+ +D L +K + + HR+ ++ L S + N+
Sbjct: 447 TIQSVEQQV-QAAKDERDRLMDQRKYVDWPRTSCATLTIHRELWREEAKLDSILINASNE 505
Query: 489 LRELKADRHENE-RDAKLSQAVETLKRL-----FQGVHGRMTDLCRPTQKKYNLAVTVAM 542
+ +A+R+ ++ D S+ + ++R+ +GV+G + +L +Y AV V
Sbjct: 506 VD--RAERNLSQMMDHNTSRGIAAVRRIKRQHNLEGVYGTLAELFE-VNDRYRTAVEVTA 562
Query: 543 GKFMDAVVVEDENTGKECI----------------------------------------- 561
G+ + VV+ ++T + +
Sbjct: 563 GQSLFHYVVDTDDTATKVLEILQHEKAGRVTFMPLNRLRTKPLNMPKASDTIPMIEKLQY 622
Query: 562 -----KAVLFAVGNTLVCDGLDEAKVLSWSGERFRVVTVDGILLTKAGTMTGGTTGGMEA 616
KA G T++C L A + S T +G K G +TGG ++
Sbjct: 623 DRAYEKAFQHVFGKTIICPNLQVASQYARS-HGVNATTPEGDRSDKRGALTGGFHDSRQS 681
Query: 617 R------SKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGLEKKIQYA 670
R +W D + E K + + ELEEL + I+ ++Q
Sbjct: 682 RLDAVKNLAKWRD-EYETKKSRGSEIRKELEELDQL-------------ITRAVGELQKL 727
Query: 671 EIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRINEITDRL 730
E ++ +++ LRQE R+ ++ LQK D +D + + +E + + D++
Sbjct: 728 EQQRHQVQNSSGPLRQELRSKRDL-------LQKQNDNLDAKRRALRNIEGNLAALKDQV 780
Query: 731 YRDFSESVGVANIREYEENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKRDVESRIKKL 790
D E A + L + E LN + Q + +YQ ++ ++E+R L
Sbjct: 781 --DAFE----AELSSPFHKALTDEEEARLESLNSNVQEYRREYQELSGKRSELETRKSVL 834
Query: 791 ESSL-STLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECEK---EIQEW 846
E L L L Q+ ++ D+ A E G+I + E + D+ + ++ E
Sbjct: 835 EVELRENLNPRLDQLLAQDADI--ADEDGQGNIKETQREQKRLTKVLDKLAQRLAQVDES 892
Query: 847 EKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSP 906
+QA++ T L++ N + + ++ + I + Q MEK + L + +
Sbjct: 893 MEQANSRVTELTQRNAESRRELEELAKSIEKHQRRMEKSMQKKAAL------TKQAAECA 946
Query: 907 GPVFDFSQLNRSYLQERRPSEREKLEVEFKQKMDALISEIEKTAP-NLKALDQYEALLEK 965
+ D L + + ++ + +K+ + ++K A N KA +QY ++
Sbjct: 947 ANIRDLGVLPDEAFTKYKNTDSNTV----VKKLHKVNEALKKYAHVNKKAFEQYNNFTKQ 1002
Query: 966 ERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNH-ISSSIDRIYKQLTRSNTHPL 1024
T+T +R+EE A+ QK + +H +I+R +KQ++R
Sbjct: 1003 RETLT-----SRREELDAS-------QKSIDDLISVLDHRKDEAIERTFKQVSREFATIF 1050
Query: 1025 -----GGTAYLNLENEDD--------------PFLHGIK-YTAMPPTKRFRD-------M 1057
G L ++ + D H ++ Y + + F +
Sbjct: 1051 EKLVPAGRGRLIIQRKTDRTQRAEDDLESEDEEAKHSVENYVGVGISVSFNSKHDDQQRI 1110
Query: 1058 EQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGN 1117
+QLSGG+K++ ALAL+F+I + P+PF++ DE+DA LD VA +++ S
Sbjct: 1111 QQLSGGQKSLCALALVFAIQACDPAPFYLFDEIDANLDAQYRTAVAQMLKTIS------- 1163
Query: 1118 QDADEGNGFQSIVISLKDSFYDKAEALVGV 1147
D NG Q I + + AE GV
Sbjct: 1164 ---DSTNG-QFICTTFRPEMLHVAEKCYGV 1189
>sp|Q1INB1|SMC_KORVE Chromosome partition protein Smc OS=Koribacter versatilis (strain
Ellin345) GN=smc PE=3 SV=1
Length = 1308
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 168/680 (24%), Positives = 273/680 (40%), Gaps = 138/680 (20%)
Query: 483 GEIENQLRELKADR--------HENERDAKLSQAVETLKRLFQGVHGRMTDL--CRPTQK 532
G + LR LK D H ++ AK S ++ RL R+T + C
Sbjct: 671 GAADEGLRLLKGDVDGRATFLVHPSDSQAKFSFVLDESMRL-PFTPDRVTPMKNCIRVLN 729
Query: 533 KYNLAVTVAMGKFMDAVVVEDENTGKECIKAVLFAVGNTLVCDGLDEAKVLSWSGERFRV 592
+ ++ V + K + +V D G+E A+ N +A LS SGE F
Sbjct: 730 GFGKSLEVVLPKLGNGYIVPDPAIGRE------LALENP-------DAFFLSQSGECFHN 776
Query: 593 VTVDGILLTKAGTMTGGTTGGMEARSKQWDDKKIEGLKRKKEQYESELEEL-GSIREMQL 651
VTV TGG KQ + LKR+ ++++ S+R+ +
Sbjct: 777 VTV---------------TGG-----KQRSQGPL-SLKRELRDVMRCIDDVERSLRDGEA 815
Query: 652 RESETSGKISGLEKKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDR 711
R +I+ L +Q E EKR E + R ++ E+ R++ DR
Sbjct: 816 RVLMLGKEIAELTSLLQRLEDEKREGEKQAMTSGHTLRQLENEMARVR----------DR 865
Query: 712 RTTDINKLERRINEITDRLYRDFSESVGVANIR----EYEENQLKAAQNVAEERLN---L 764
T +L+R NE ++R ++G + E +L+AA N A + L+
Sbjct: 866 HATYERELQRVSNEKSER-----ENAIGGLRMELEAAEARHQELEAAMNAATQSLDELRT 920
Query: 765 SNQLAKLKYQLEYEQKRDVESRIKKLESSLSTLENDLKQVKKKEGDVKSATETATGD--- 821
+ A Q +E R + SSL +E+ +++V + G +K E+A +
Sbjct: 921 ARDNASHAASEARAQAAALEERHRAAASSLQRIESMVQEVSARIGKLKGQVESAAAEKQQ 980
Query: 822 -----------ITRWKEEM-------RGWKSNSDECEKEIQEWEKQASAATTSLSKLNRQ 863
+ W E R ++ S++ I E E++ A +L +
Sbjct: 981 RESENETIAEQLVTWTAEREAAEARDRELQTESEQVRARIAEIEEELKTARQALDAARDR 1040
Query: 864 INSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPMETDSSSPGPVFDFSQLNRSYLQER 923
A + +L S + + E C E V T D M + +L R E
Sbjct: 1041 RGELHASVARLQSDGEHMAETCVQELSV--TRPDLMAIE-----------ELPRLTGDEL 1087
Query: 924 RPSEREKLEVEFKQKMDALISEIEKTAP-NLKALDQYEALLEKERTVTEEFEAARKEEKQ 982
++ E+ ++ K +E P N+ AL++Y KE EF E Q
Sbjct: 1088 AVADTEQKDMRTK---------LENMGPVNMMALEEY-----KETAQRHEFL-----ETQ 1128
Query: 983 AADAYNSVKQKRYGL----------FMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNL 1032
D +S++ + + F EAF I+ + + +K+L GG ++ L
Sbjct: 1129 RKDLLDSIENTQNTIKEIDQITKVKFDEAFAAINENFGKAFKKLFG------GGQGFMKL 1182
Query: 1033 ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA 1092
+E + GI A PP K+ +++ LSGGEKT+ A +LL I Y PSPF ILDEVDA
Sbjct: 1183 TDELNSSDSGIDVIASPPGKKLQNVLLLSGGEKTLTAFSLLVGIFQYAPSPFCILDEVDA 1242
Query: 1093 ALDNLNVAKVAGFIRSKSCE 1112
LD NVA+ ++ S +
Sbjct: 1243 PLDETNVARFNELVKEMSMQ 1262
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 29 PFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQLKDLIYA 73
P AI+GPNG GKSN+ DAIS+VLG ++ + LRG ++D+I+A
Sbjct: 24 PGDGIAAIVGPNGCGKSNIADAISWVLGEQSAKSLRGIHMQDVIFA 69
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 114/252 (45%), Gaps = 22/252 (8%)
Query: 99 ELQFTRTITSSGGSEYRIDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPK 158
E+ TR + SG SEY ++G++ + + G+ ++ ++ QG + I S P
Sbjct: 208 EICVTRRLFRSGDSEYLLNGKLSRLRDVHDIFMGTGLGPESYA-IIEQGRIGQILSSKPT 266
Query: 159 ELTALLEQISGSDELKREYEVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERH 218
+ A++E+ +G + K + + E A+ A V V + K Q +AER+
Sbjct: 267 DRRAIIEEAAGITKYKTKKRLAEARLEDAKSNLARVNDIFDEVTRQMNSLKRQAAKAERY 326
Query: 219 LRLQDQLKSLKKEHFLWQLFNIEKDITKASKDLEA---EKRSREEVMREL--EHFEDQKR 273
+L+D+++ + + I+ +I +L E +R + ++++ EH E +R
Sbjct: 327 AKLRDEMREKLRVVLASKFALIDAEIAGLEAELTTVTEEIATRTDAVQQMDNEHGERVQR 386
Query: 274 G---------KRKELAKYLKEIAQC-------EKKIAERNNRLDKSQPELLKLNEEMSRI 317
G R+ L +E+ + E++ AE R ++ E+ E++ R+
Sbjct: 387 GYAIDAEAKQNRESLNNVSREMDRAAQRRRTNEERCAELVARSAGAEAEIQNTTEQLGRL 446
Query: 318 NSKIKSSKKELE 329
++ ++++ LE
Sbjct: 447 EEELATNRQVLE 458
>sp|P38989|SMC2_YEAST Structural maintenance of chromosomes protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SMC2 PE=1
SV=1
Length = 1170
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 144/305 (47%), Gaps = 44/305 (14%)
Query: 9 KIHRLELENFKSYKGLQIIGPF-SDFTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQ 66
K+ L ++ FKSY +I + F AI G NG+GKSN++DAI FVLG+ + +R
Sbjct: 2 KVEELIIDGFKSYATRTVITDWDPQFNAITGLNGSGKSNILDAICFVLGIASMSTVRASS 61
Query: 67 LKDLIYAYDDKEKEQKG-RRAFVRLVYQ----------LGNESELQFTRTITSSGGSEYR 115
L+DLIY ++ Q G +A V +V+ N ++ TR + G S+Y
Sbjct: 62 LQDLIY-----KRGQAGVTKASVTIVFDNTDKSNSPIGFTNSPQISVTRQVVLGGTSKYL 116
Query: 116 IDGRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKR 175
I+G +S+ + + NFL+ QG + + + P E+ +L+E+ +G+
Sbjct: 117 INGHRAPQQSVLQLFQSVQLNINNPNFLIMQGKITKVLNMKPSEILSLIEEAAGT----- 171
Query: 176 EYEVLEDEKGKAE---EKSALVYQKKRTVVLERKQKKEQKEEAERHLRL-----QDQLKS 227
++ ED + KAE K Q+ RT++ E + K +K E+ + L Q L+
Sbjct: 172 --KMFEDRREKAERTMSKKETKLQENRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDLEK 229
Query: 228 LKKEHFLWQLFNIEKDITKASKDLEA-----------EKRSREEVMRELEHFEDQKRGKR 276
++ ++ +NI+ T + LE K++ EE+ E E+ K K
Sbjct: 230 TERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEEIDSLNEDVEEIKLQKE 289
Query: 277 KELAK 281
KEL K
Sbjct: 290 KELHK 294
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 13/83 (15%)
Query: 1059 QLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQ 1118
+LSGG++++ AL+L+ ++ ++P+P +ILDEVDAALD + + I+++
Sbjct: 1083 ELSGGQRSLIALSLIMALLQFRPAPMYILDEVDAALDLSHTQNIGHLIKTR--------- 1133
Query: 1119 DADEGNGFQSIVISLKDSFYDKA 1141
G Q IV+SLK+ + A
Sbjct: 1134 ----FKGSQFIVVSLKEGMFANA 1152
>sp|Q5H054|SMC_XANOR Chromosome partition protein Smc OS=Xanthomonas oryzae pv. oryzae
(strain KACC10331 / KXO85) GN=smc PE=3 SV=2
Length = 1167
Score = 94.7 bits (234), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 985 DAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIK 1044
+A + ++ G F + F+ ++S + +Y +L GG AYL L ED G+
Sbjct: 1000 EAIRKIDRETRGRFKDTFDRVNSGVQALYPRLFG------GGHAYLELTGED-LLDTGVT 1052
Query: 1045 YTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAG 1104
A PP KR + LSGGEK + A+AL+F+I P+PF +LDEVDA LD NV ++A
Sbjct: 1053 IMARPPGKRVSSISLLSGGEKAMTAVALVFAIFQLNPAPFCLLDEVDAPLDEANVGRLAN 1112
Query: 1105 FIRSKS 1110
+R S
Sbjct: 1113 MVREMS 1118
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/383 (21%), Positives = 174/383 (45%), Gaps = 67/383 (17%)
Query: 9 KIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG-QLRGGQL 67
++ ++L FKS+ + ++ T I+GPNG GKSN++DA+ +V+G + +LRG L
Sbjct: 2 RLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDSL 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVY---------QLGNESELQFTRTITSSGGSEYRIDG 118
D+I++ K +A V L++ + + +E+ R ++ G S Y ++G
Sbjct: 62 TDVIFSGSSARKPVS--QATVELIFDNSDHTISGEFASFNEISVKRLVSRDGNSAYYLNG 119
Query: 119 RVVNWDEYNAKLRSLGILVKARNF-LVFQGDVESIASKNPKELTALLEQISGSDELKREY 177
+ LG + R++ ++ QG + I P++L LE+ +G
Sbjct: 120 TKCRRRDITDLF--LGTGLGPRSYSIIEQGMISQIIEARPEDLRVYLEEAAG-------- 169
Query: 178 EVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQ-DQLKSLKKEHFLWQ 236
+ + K+++++ E RH R D+L L++E Q
Sbjct: 170 ------------------------ISKYKERRKETETRIRHTRENLDRLGDLREE-ITKQ 204
Query: 237 LFNIEKDITKAS--KDLEAEKRSREEVMRELEH--FEDQKRGKRKE-------LAKYLKE 285
L ++++ +A + L+ E+R ++ + LE+ + Q +G R++ L +++ E
Sbjct: 205 LAHLQRQARQAEQYQALQEERRIKDAEWKALEYRGLDGQLQGLREKLNQEETRLQQFIAE 264
Query: 286 IAQCEKKI-------AERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKH 338
E +I E + K+Q ++ ++ ++RI +I+ ++ R + R +
Sbjct: 265 QRDAEARIETGRVRREESAEAVAKAQADVYQVGGALARIEQQIQHQRELSHRLHKARDEA 324
Query: 339 ANDIKELQKGIQDLTGKLEELNE 361
+ ++EL + I + KL L E
Sbjct: 325 QSQLQELTQHISGDSAKLSVLRE 347
>sp|P50533|SMC2_XENLA Structural maintenance of chromosomes protein 2 OS=Xenopus laevis
GN=smc2 PE=1 SV=1
Length = 1203
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 187/377 (49%), Gaps = 42/377 (11%)
Query: 15 LENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQLKDLIY 72
++ FKSY I F F AI G NG+GKSN++D+I F+LG+ Q+R L+DL+Y
Sbjct: 8 IDGFKSYAQRTEINGFDPLFNAITGLNGSGKSNILDSICFLLGISNLTQVRASNLQDLVY 67
Query: 73 AYDDKEKEQKGRRAFVRLVYQ--------LGNES--ELQFTRTITSSGGSEYRIDGRVVN 122
K + +A V + + LG E+ E+ TR + G ++Y I+G N
Sbjct: 68 ----KNGQAGITKATVSITFDNYDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNAN 123
Query: 123 WDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLED 182
S+G+ V +FL+ QG + + + P E+ A++E+ +G+ R YE +
Sbjct: 124 NTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILAMIEEAAGT----RMYECKKI 179
Query: 183 EKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQ-----LKSLKKEHFLWQL 237
K EK ++ +T++ E K + ER L+ Q ++ L + + +Q
Sbjct: 180 AAQKTIEKKEAKLKEIQTILEEEITPTIHKLKEERSSYLEYQKIMREIEHLSRLYVAYQF 239
Query: 238 FNIEKDITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERN 297
E+ +++++L K ++ +++ + + +R K KEL KEIA+ EK R+
Sbjct: 240 VCAEETKVRSAEEL---KEMQDSILKLQDTMAENER-KVKELG---KEIAELEKM---RD 289
Query: 298 NRLDKSQPELLKLNEEMSRINSKIKSS----KKELERKREERRKHANDIKELQKGIQDLT 353
+ + L + E R ++K++S+ K+ ++ +RE++RK +K +++ + LT
Sbjct: 290 QEVGGALRSLEEALSEAQRADTKVQSALDLKKQNMKAEREKKRKEL--VKSMEEDAKVLT 347
Query: 354 GKLEELNEKSRDGAGRL 370
K +E+ +K DG L
Sbjct: 348 AKEKEV-KKITDGLSSL 363
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 30/236 (12%)
Query: 912 FSQLNRSY-LQERRPSEREKLEVEFKQKMDALISEIEKTAPNL--KALDQYEALLEKERT 968
F Q N +Y + P E + + ++K + L + A N+ +A ++Y L++++R
Sbjct: 949 FGQANTAYDFKTNNPKEAGQRLHKLQEKKEKLGRNVNMRAMNMLTQAEERYNDLMKRKRI 1008
Query: 969 VTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTA 1028
V ++ + + QK+ A+ ++ I+ L L G
Sbjct: 1009 V-------ENDKSKILTTIEELDQKKNEALNIAWQKVNKDFGSIFSTL-------LPGAN 1054
Query: 1029 YLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILD 1088
+ E L G+++ ++ +LSGG++++ AL+L+ ++ +KP+P +ILD
Sbjct: 1055 AMLAPPEGQSVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILAMLLFKPAPIYILD 1114
Query: 1089 EVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEAL 1144
EVDAALD + + +R+ Q IV+SLKD ++ A L
Sbjct: 1115 EVDAALDLSHTQNIGQMLRTHFRHS-------------QFIVVSLKDGMFNNANVL 1157
>sp|Q9CBT5|SMC_MYCLE Chromosome partition protein Smc OS=Mycobacterium leprae (strain TN)
GN=smc PE=3 SV=1
Length = 1203
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 43/252 (17%)
Query: 904 SSPGPV-FDFSQLNRSYLQERRP--SEREKLEVEFKQKMDALISEIEKTAPNLKALDQYE 960
+SP P+ +D + QERR +ERE ++E+ + P AL+++
Sbjct: 969 TSPAPMPYDRAT------QERRAKRAERE-------------LAELGRVNP--LALEEFA 1007
Query: 961 ALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYGLFMEAFNHISSSIDRIYKQLTRSN 1020
AL E+ ++ + E + K D V + +F +AF + ++ L
Sbjct: 1008 ALEERYNFLSTQLEDVKGARKDLLDVVAEVDARILQVFSDAFVDVEREFRGVFTSL---- 1063
Query: 1021 THPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYK 1080
P GG L L + DD GI+ A P K+ + LSGGEK++ A+A+L +I +
Sbjct: 1064 -FP-GGEGRLRLTDPDDMLTTGIEVEARPSGKKVSRLSLLSGGEKSLIAVAMLVAIFKAR 1121
Query: 1081 PSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDK 1140
PSPF+I+DEV+AALD++N+ ++ G E RG Q I+I+ + +
Sbjct: 1122 PSPFYIMDEVEAALDDVNLCRLIGVF-----EQLRGQS--------QLIIITHQKPTMEV 1168
Query: 1141 AEALVGVYRDSD 1152
A+ L GV D
Sbjct: 1169 ADTLYGVTMQGD 1180
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 144/604 (23%), Positives = 247/604 (40%), Gaps = 94/604 (15%)
Query: 13 LELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTGQ-LRGGQLKDLI 71
L L+ FKS+ + TA++GPNG+GKSN++DA+++V+G + + LRG +++D+I
Sbjct: 6 LTLKGFKSFASPTTLRFEPGITAVVGPNGSGKSNVVDALAWVMGEQGAKTLRGSKMEDVI 65
Query: 72 YAYDDKEKEQKGRRAFVRLVYQLGNE-----SELQFTRTITSSGGSEYRIDGRVVNWDEY 126
+A + GR ++ N SE+ TR + G SEY I+G +
Sbjct: 66 FA-GTLSRAPLGRAEVTLIIDNSDNVLPIEYSEVSITRRMFRDGASEYEINGSSCRLMDV 124
Query: 127 NAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLEDEKGK 186
L GI + + +V QG ++ I P++ +E+ +G + +R E K
Sbjct: 125 QELLSDSGI-GREMHVIVGQGKLDQILQSRPEDRRTFIEEAAGILKYRRRK---EKALRK 180
Query: 187 AEEKSA-LVYQKKRTVVLERKQK--KEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEKD 243
+ SA L T L R+ K Q E A R +Q L+ +
Sbjct: 181 LDAMSANLARLTDLTTELRRQLKPLSRQAEVARRAATIQADLRDAR-------------- 226
Query: 244 ITKASKDLEAEKRSRE-----EVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNN 298
+ A+ DL + + R+ E M +H E R LA +E+A E + E +
Sbjct: 227 LRLAADDLVSRQGQRDAIVEAETMMRRDHDEAAAR-----LAVASEELAAHEAALTELSG 281
Query: 299 RLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQD---LTGK 355
R + Q L+ + R+++ I+ + + R + D+ D L +
Sbjct: 282 RAESVQQIWFGLSTLVERVSATIRIAGE---------RAYHLDVDPATPSDTDPDVLEAE 332
Query: 356 LEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQHADLEVLKNL 415
+++ + L + TQL EA E+ DRE+HA +L
Sbjct: 333 AQQMEVAEQQLLAELAVARTQL--------EAA--------RAELADRERHAVEADKAHL 376
Query: 416 EANLQQLSNRE--HELDAQEDQMRKRQKNILDASGGHKDELTKLKKELRSMQDKHRDSRQ 473
EA + RE L Q + MR R ++I D + +L + + + + +
Sbjct: 377 EAVRAEADRREGLALLAGQVETMRARIESI-------DDSVARLSERIEEVTARTQQILA 429
Query: 474 KYENLKSKIGEI--------ENQLRELKADRHENERDAKLSQAVETLKRLFQGVHGRMTD 525
++E ++ ++GE+ E R + A R NER A+L A +R + R+
Sbjct: 430 EFETVQGRVGELDQSEVHLDEQHERAVAALRFANERVAELQSAERDAERQVVSLRARIDA 489
Query: 526 LCRPTQKK-------YNLAVTVAMGKFMDAVVVEDENTGKE-CIKAVLFAVGNTLVCDGL 577
L ++K N + T +G V V G E + AVL + L D L
Sbjct: 490 LTMGLERKDGAAWLARNYSDTGLLGSIAKLVKV---RPGYEAALAAVLGPAADALAVDSL 546
Query: 578 DEAK 581
A+
Sbjct: 547 GAAR 550
>sp|Q90988|SMC2_CHICK Structural maintenance of chromosomes protein 2 OS=Gallus gallus
GN=SMC2 PE=2 SV=1
Length = 1189
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 92/182 (50%), Gaps = 20/182 (10%)
Query: 10 IHRLELENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQL 67
I + LE FKSY I F F AI G NG+GKSN++D+I F+LG+ Q+R L
Sbjct: 3 IKSIVLEGFKSYAQRTEIRDFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRASSL 62
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVYQ--------LG--NESELQFTRTITSSGGSEYRID 117
+DL+Y K + +A V + + LG N E+ TR + G ++Y I+
Sbjct: 63 QDLVY----KNGQAGVNKATVSITFDNSDKKNSPLGFENNDEITITRQVIVGGRNKYLIN 118
Query: 118 GRVVNWDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREY 177
G + + S+G+ V +FL+ QG + + + P E+ A++E+ +G+ R Y
Sbjct: 119 GMNASNNRVQDLFGSVGLNVNNPHFLIMQGQITKVLNMKPTEILAMIEEAAGT----RMY 174
Query: 178 EV 179
E
Sbjct: 175 EC 176
Score = 68.2 bits (165), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 140/631 (22%), Positives = 271/631 (42%), Gaps = 114/631 (18%)
Query: 548 AVVVEDENTGKECIKAVLFAVGNTLVCDGLDEAKVLSWSGERFR-VVTVDGILLTKAGTM 606
A+ + D N+ E KA+ + G TLVC +D AK +++ R VT+ G + GT+
Sbjct: 606 AISLIDYNS--ELQKAMEYVFGTTLVCSSMDNAKKVTFDKRIMRKTVTLQGDIFDPQGTL 663
Query: 607 TGGTTGGME---ARSKQWDDKKIEGLKRKKEQYESELEELGSIREMQLRESETSGKISGL 663
+GG + + ++ K D + E LK K Q E+ +EL +++ M
Sbjct: 664 SGGASSHVTPILSKLKTMRDAEDE-LKIKTSQLEATEKELANLKNMA------------- 709
Query: 664 EKKIQYAEIEKRSIEDKLANLRQEKRTIKEEIGRIKPDLQKLKDKIDRRTTDINKLERRI 723
+K +L+Q+ EE ++ +Q+ ++ D+ L++ I
Sbjct: 710 ---------------EKYQHLKQQWEMKSEEAELLQTKIQQ--SAYHKQQEDLLALKKTI 752
Query: 724 NEITDRLYRDFSESVGVANIREYE--ENQLKAAQNVAEERLNLSNQLAKLKYQLEYEQKR 781
E + L + ES A EY+ EN++K A+ AE + N KL ++K
Sbjct: 753 AECEETL-KKTEESQRKAE-EEYKALENKMKNAE--AERGKEIKNAQQKLN---SAKKKA 805
Query: 782 DVESR-IKKLESSLSTLENDLKQVKKKEGDVKSATETATGDITRWKEEMRGWKSNSDECE 840
D SR +K+ + + L +L+Q+K+++ K +E A I KE++ ++ + +
Sbjct: 806 DDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQQAIASLKEQVSALEAEAVKTR 865
Query: 841 KEIQEWEKQASAATTSLSKLNRQINSKEAQIEQLISRKQEIMEKCELECIVLPTVEDPME 900
+ ++ E + S+ + + + I +K A+IE+ + E+ +L L + +
Sbjct: 866 ESLKNAENELSSEKGLMEERTKDIKAKSAKIEKYREQNNEL----QLSINALEHDINKYQ 921
Query: 901 TDSSSPGPVFD---------------FSQLNRSY-LQERRPSE-----------REKLEV 933
+++ D F Q + +Y + P E +EKLE
Sbjct: 922 QETADASSTLDKLLKEYKWIASEKELFGQADTTYDFEANNPKETGQKLQKLLTKKEKLEK 981
Query: 934 EFKQKMDALISEIEKTAPNLKALDQYEALLEKERTVTEEFEAARKEEKQAADAYNSVKQK 993
+ L+SE E ++Y L++K+R V ++ + + +K
Sbjct: 982 SLNMRAMNLLSEAE---------ERYNDLMKKKRMV-------ENDKIKILATIEELDRK 1025
Query: 994 RYGLFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKR 1053
+ A+ ++ I+ L L G + + ++ L G+++
Sbjct: 1026 KNKALHIAWEKVNKDFGSIFSML-------LPGAKAMLVPSKKQNILDGLEFRVGLGDIW 1078
Query: 1054 FRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEG 1113
++ +LSGG++++AAL+L+ +I +KP+P +ILDEVDAALD + + + + +
Sbjct: 1079 KENLTELSGGQRSLAALSLILAILLFKPAPIYILDEVDAALDLSHTQNIGQMLHAHFKQS 1138
Query: 1114 TRGNQDADEGNGFQSIVISLKDSFYDKAEAL 1144
Q +V+SLKD ++ A L
Sbjct: 1139 -------------QFLVVSLKDGMFNNANVL 1156
>sp|Q8CG48|SMC2_MOUSE Structural maintenance of chromosomes protein 2 OS=Mus musculus
GN=Smc2 PE=1 SV=2
Length = 1191
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 182/383 (47%), Gaps = 44/383 (11%)
Query: 15 LENFKSYKGLQIIGPFSD-FTAIIGPNGAGKSNLMDAISFVLGVRT-GQLRGGQLKDLIY 72
LE FKSY + F F AI G NG+GKSN++D+I F+LG+ Q+R L+DL+Y
Sbjct: 8 LEGFKSYAQRTEVNGFDPLFNAITGLNGSGKSNILDSICFLLGISNLSQVRASNLQDLVY 67
Query: 73 AYDDKEKEQKGRRAFVRLVYQ--------LGNES--ELQFTRTITSSGGSEYRIDGRVVN 122
K + +A V + + LG E+ E+ TR + G ++Y I+G N
Sbjct: 68 ----KNGQAGITKASVSITFDNSDKKQSPLGFEAHDEITVTRQVVIGGRNKYLINGVNAN 123
Query: 123 WDEYNAKLRSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKREYEVLED 182
S+G+ V +FL+ QG + + + P E+ +++E+ +G+ R YE +
Sbjct: 124 NTRVQDLFCSVGLNVNNPHFLIMQGRITKVLNMKPPEILSMIEEAAGT----RMYEYKKI 179
Query: 183 EKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQLFNIEK 242
K EK ++ +T++ E QK + ER L+ Q K +++ L +L+
Sbjct: 180 AAQKTIEKKEAKLKEIKTILEEEITPTIQKLKEERSSYLEYQ-KVMREIEHLSRLY---- 234
Query: 243 DITKASKDLEAEKRSREEVMRELEHFEDQKRGKRKELAKYLKEIAQCEKKIAERNNRLDK 302
A + L AE ++E EL+ +D+ ++ L++ K+I +I E R DK
Sbjct: 235 ---IAYQFLRAED-TKERSAGELKEMQDKIVNLQEVLSENEKKIKALNCEIEELERRKDK 290
Query: 303 SQPELLKLNE----EMSRINSKIKSS----KKEL---ERKREE-RRKHANDIKEL---QK 347
LK E E R+N+K +S+ KK L E KR+E + A D K L +K
Sbjct: 291 ETGGKLKSLEDACAEAQRVNTKSQSAFDLKKKNLASEETKRKELQNSMAEDSKALAAKEK 350
Query: 348 GIQDLTGKLEELNEKSRDGAGRL 370
++ +T L L E S A L
Sbjct: 351 EVKKITDGLHGLQEASNKDAEAL 373
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 1024 LGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSP 1083
L G + E L G+++ ++ +LSGG++++ AL+L+ S+ +KP+P
Sbjct: 1049 LPGANAMLAPPEGQTVLDGLEFKVALGNTWKENLTELSGGQRSLVALSLILSMLLFKPAP 1108
Query: 1084 FFILDEVDAALDNLNVAKVAGFIRSKSCEGTRGNQDADEGNGFQSIVISLKDSFYDKAEA 1143
+ILDEVDAALD + + +R+ Q IV+SLK+ ++ A
Sbjct: 1109 IYILDEVDAALDLSHTQNIGQMLRTHFTHS-------------QFIVVSLKEGMFNNANV 1155
Query: 1144 L 1144
L
Sbjct: 1156 L 1156
Score = 38.1 bits (87), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 559 ECIKAVLFAVGNTLVCDGLDEAKVLSWSGERF-RVVTVDGILLTKAGTMTGGT 610
E K + F G T VC+ +D AK +++ R VT+ G + GT++GG
Sbjct: 615 ELQKGMEFVFGTTFVCNNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGA 667
>sp|Q604U6|SMC_METCA Chromosome partition protein Smc OS=Methylococcus capsulatus (strain
ATCC 33009 / NCIMB 11132 / Bath) GN=smc PE=3 SV=2
Length = 1169
Score = 87.8 bits (216), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 87/174 (50%), Gaps = 22/174 (12%)
Query: 945 EIEKTAP-NLKALDQYE-------ALLEKERTVTEEFEAARKEEKQAADAYNSVKQKRYG 996
EIE+ P NL A+ +Y+ L E++R +TE + A + ++
Sbjct: 962 EIERLGPVNLTAMQEYQEQEARQRYLEEQDRDLTESLATLEQ-------AIEKIDRECRA 1014
Query: 997 LFMEAFNHISSSIDRIYKQLTRSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRD 1056
F E F I++ R++ +L GG A L L E++ G+ A PP KR
Sbjct: 1015 RFKETFEKINAGFQRMFPKLFG------GGKAALEL-TENNLLSAGVSVMAQPPGKRNSS 1067
Query: 1057 MEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKS 1110
+ LSGGEK + A AL+F+I P+PF +LDEVDA LD+ NV + + ++ S
Sbjct: 1068 IHLLSGGEKALTAAALVFAIFELNPAPFCLLDEVDAPLDDANVGRFSQLVKEMS 1121
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/536 (22%), Positives = 241/536 (44%), Gaps = 57/536 (10%)
Query: 9 KIHRLELENFKSYKGLQIIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG-QLRGGQL 67
++ +L++ FKS+ + + ++GPNG GKSN++DA+ +V+G + LRG +
Sbjct: 2 RLEKLKIAGFKSFVDPTTLPLPGNLVGVVGPNGCGKSNVIDAVRWVMGESSARHLRGETM 61
Query: 68 KDLIYAYDDKEKEQKGRRAFVRLVY-----QLGNE----SELQFTRTITSSGGSEYRIDG 118
D+I+ + + +A V LV+ + G E ++ R + G S Y ++G
Sbjct: 62 ADVIF--NGSSTRKPASQASVELVFDNSSGRAGGEYARYQQIAIRRQVARDGQSSYFLNG 119
Query: 119 RVVNWDEYNAKLRSLGILVKARNFLVF-QGDVESIASKNPKELTALLEQISGSDELKREY 177
+ LG + AR++ + QG + + P+E+ ++E+ +G + K
Sbjct: 120 TRCRRKDITDLF--LGTGLGARSYAIIEQGTISRLIEAKPEEMREIIEEAAGISKYKERR 177
Query: 178 EVLEDEKGKAEEKSALVYQKKRTVVLERKQKKEQKEEAERHLRLQDQLKSLKKEHFLWQL 237
E E + + + + + Q +AE+ + L+D+ + LK E +
Sbjct: 178 HETEQRMRHTRENLERLADLREELGRQLGHLQRQARKAEKFIALRDEERRLKLELLGLRW 237
Query: 238 FNIEKDITKASKDLEAEKRSREEVMREL---EH-FEDQKRGKRKELAKYLKEIAQCEKKI 293
+E+ + + L+AE EE R L EH E Q G + L+ +AQ
Sbjct: 238 RALERQLDR----LKAELTDSEERFRRLTGEEHACETQLEGLNR-----LRGVAQ----- 283
Query: 294 AERNNRLDKSQPELLKLNEEMSRINSKIKSSKKELERKREERRKHANDIKELQKGIQDLT 353
+LD Q +L E+SR++ I+ ++K +ER + ++++++ D
Sbjct: 284 ----EKLDVQQGRFYELGAEISRLDQFIRHTQKSRAELVQERERVEAELRKVESDRDDDR 339
Query: 354 GKLEELNEKSRDGAGRLPLLDTQLTEYFQIKEEAGMKTAKLRDEKEVLDREQH-----AD 408
+LE + ++ + G+L L+ ++ E +++ A K R+ E L ++H A
Sbjct: 340 LRLEAVRAEAAELKGKLASLEQEVAEAVSVRQAAEAKLKTCREGWEALAGDRHRLEGQAA 399
Query: 409 LE--VLKNLEANLQQLSNREHELDAQEDQMRKR------QKNILDASG--GHKDE----L 454
L+ L+ L + QQL R L Q+ ++ K Q + L+ +G ++E +
Sbjct: 400 LQRSRLQQLREHGQQLGGRRQRLLQQQSELEKALAALDVQAHRLEVAGIEAEREETVGAV 459
Query: 455 TKLKKELRSMQDKHRDSRQKYENLKSKIGEIENQLRELKA-DRHENERDAKLSQAV 509
L +E +D+ R +R++ ++ + ++ ++ L+ RH RD + AV
Sbjct: 460 EALAREAERQRDRLRFARERLNPARAGLHAVQGKVASLETLQRHAMGRDRSAAAAV 515
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.130 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 411,812,312
Number of Sequences: 539616
Number of extensions: 18344256
Number of successful extensions: 151755
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1043
Number of HSP's successfully gapped in prelim test: 4627
Number of HSP's that attempted gapping in prelim test: 95770
Number of HSP's gapped (non-prelim): 30334
length of query: 1154
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1025
effective length of database: 121,958,995
effective search space: 125007969875
effective search space used: 125007969875
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)