Query 036405
Match_columns 98
No_of_seqs 167 out of 1006
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 21:19:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036405.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/036405hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gme_A Heat shock protein 16.9 99.9 2.6E-21 9E-26 129.8 9.5 93 1-98 1-104 (151)
2 3gla_A Low molecular weight he 99.8 5.3E-19 1.8E-23 110.6 8.4 63 35-98 2-64 (100)
3 4eld_A MJ16.5-P1, small heat s 99.7 6.4E-18 2.2E-22 114.0 8.6 62 36-98 55-117 (161)
4 4fei_A Heat shock protein-rela 99.7 2.2E-17 7.7E-22 103.9 5.0 59 34-98 3-61 (102)
5 3aab_A Putative uncharacterize 99.7 7.8E-17 2.7E-21 104.3 6.2 60 35-97 22-81 (123)
6 2wj5_A Heat shock protein beta 99.4 2.4E-13 8.3E-18 85.3 5.9 54 39-95 3-56 (101)
7 3l1e_A Alpha-crystallin A chai 99.4 6.5E-13 2.2E-17 84.1 7.9 55 38-95 3-57 (106)
8 3q9p_A Heat shock protein beta 99.3 3.3E-12 1.1E-16 77.8 6.3 42 42-84 2-43 (85)
9 2klr_A Alpha-crystallin B chai 99.3 3.9E-12 1.3E-16 87.1 6.0 54 39-95 65-118 (175)
10 2y1y_A Alpha-crystallin B chai 99.3 1.5E-11 5.1E-16 75.5 6.8 50 43-95 2-51 (90)
11 2bol_A TSP36, small heat shock 99.2 1.1E-11 3.9E-16 91.5 6.4 48 35-83 96-147 (314)
12 2bol_A TSP36, small heat shock 99.2 3E-11 1E-15 89.3 6.3 57 37-98 220-280 (314)
13 2xcm_C SGT1-like protein, cyto 98.1 7.3E-06 2.5E-10 49.4 5.8 42 37-79 2-43 (92)
14 1rl1_A Suppressor of G2 allele 98.1 1.3E-05 4.6E-10 50.2 6.5 43 36-79 8-50 (114)
15 1wgv_A KIAA1068 protein; CS do 97.4 0.001 3.5E-08 42.4 7.8 44 34-78 16-61 (124)
16 1wh0_A Ubiquitin carboxyl-term 97.1 0.0013 4.4E-08 42.8 5.9 43 36-79 18-61 (134)
17 1wfi_A Nuclear distribution ge 96.8 0.0043 1.5E-07 39.7 6.5 43 35-78 5-50 (131)
18 2o30_A Nuclear movement protei 96.8 0.0038 1.3E-07 40.1 6.2 41 37-78 4-45 (131)
19 1x5m_A Calcyclin-binding prote 96.8 0.0042 1.4E-07 39.6 6.2 42 36-78 19-63 (127)
20 2rh0_A NUDC domain-containing 96.7 0.0059 2E-07 40.5 6.7 43 35-78 11-54 (157)
21 3qor_A Nuclear migration prote 96.4 0.017 5.7E-07 36.6 7.1 44 34-78 13-59 (121)
22 1ejf_A Progesterone receptor P 96.2 0.01 3.5E-07 37.7 5.2 39 38-79 3-42 (125)
23 2kmw_A Uncharacterized protein 96.1 0.011 3.9E-07 38.9 5.2 40 36-78 3-43 (150)
24 2k8q_A Protein SHQ1; beta-sand 93.0 0.17 5.7E-06 32.9 4.7 41 37-78 3-45 (134)
25 3igf_A ALL4481 protein; two-do 92.9 0.094 3.2E-06 39.1 3.8 38 38-78 298-335 (374)
26 2cg9_X CO-chaperone protein SB 92.3 0.017 5.8E-07 37.2 -0.8 41 36-79 5-52 (134)
27 4fei_A Heat shock protein-rela 92.1 0.68 2.3E-05 27.9 6.5 34 49-83 63-97 (102)
28 3eud_A Protein SHQ1; CS domain 91.7 0.91 3.1E-05 28.7 6.8 43 35-78 15-59 (115)
29 3q9p_A Heat shock protein beta 88.2 1.2 4E-05 26.0 4.9 33 47-80 50-84 (85)
30 4eld_A MJ16.5-P1, small heat s 88.0 1.4 4.8E-05 28.6 5.7 35 48-83 118-153 (161)
31 3gla_A Low molecular weight he 87.0 1.8 6.1E-05 25.6 5.4 33 48-81 65-98 (100)
32 3l1e_A Alpha-crystallin A chai 86.9 1.5 5.1E-05 26.7 5.0 34 49-83 57-92 (106)
33 2wj5_A Heat shock protein beta 86.7 1.5 5.2E-05 26.4 4.9 33 49-82 56-90 (101)
34 1gme_A Heat shock protein 16.9 85.9 1.9 6.5E-05 27.8 5.4 34 48-82 105-139 (151)
35 2y1y_A Alpha-crystallin B chai 85.6 1.2 4.3E-05 26.1 4.1 33 49-82 51-85 (90)
36 2klr_A Alpha-crystallin B chai 82.6 2.3 7.7E-05 28.4 4.7 33 49-82 118-152 (175)
37 3aab_A Putative uncharacterize 80.7 2.8 9.5E-05 25.9 4.4 33 48-81 82-116 (123)
38 2ks0_A Uncharacterized protein 64.1 4.6 0.00016 23.2 2.2 21 58-79 18-38 (71)
39 2kgs_A Uncharacterized protein 63.2 6.2 0.00021 24.9 2.9 27 55-82 2-28 (132)
40 1rl1_A Suppressor of G2 allele 61.5 15 0.00052 21.9 4.5 35 46-81 53-88 (114)
41 2cql_A OK/SW-CL.103, 60S ribos 60.2 8.7 0.0003 23.3 3.1 20 60-80 20-39 (100)
42 2gjh_A Designed protein; oblig 50.6 15 0.00053 19.8 2.7 22 59-81 31-52 (62)
43 3ho6_A Toxin A; inositol phosp 42.0 8.2 0.00028 27.7 1.0 40 54-94 186-225 (267)
44 2hbp_A Cytoskeleton assembly c 40.0 17 0.00059 20.7 1.9 35 41-75 7-41 (68)
45 3jx8_A Putative lipoprotein; s 39.2 37 0.0013 23.1 4.0 41 39-80 33-73 (250)
46 1qys_A TOP7; alpha-beta, novel 35.7 41 0.0014 19.9 3.2 22 59-81 75-96 (106)
47 1rl6_A Protein (ribosomal prot 33.7 36 0.0012 22.6 3.1 21 60-81 11-31 (177)
48 4a17_E RPL9, 60S ribosomal pro 33.3 36 0.0012 22.8 3.1 20 60-80 13-32 (188)
49 3u5e_H L8, RP24, YL11, 60S rib 33.1 37 0.0013 22.9 3.1 20 60-80 13-32 (191)
50 1vq8_E 50S ribosomal protein L 32.9 38 0.0013 22.6 3.1 21 60-81 9-29 (178)
51 3iz5_F 60S ribosomal protein L 32.8 37 0.0013 22.8 3.1 20 60-80 13-32 (190)
52 3v2d_H 50S ribosomal protein L 32.4 32 0.0011 22.9 2.6 20 60-80 12-31 (180)
53 3j21_F 50S ribosomal protein L 31.8 30 0.001 23.2 2.5 25 51-80 9-33 (184)
54 2zkr_e 60S ribosomal protein L 31.0 42 0.0014 22.6 3.1 21 60-81 13-33 (192)
55 1lk2_B Beta-2-microglobulin; c 29.6 73 0.0025 18.3 3.7 24 47-70 19-43 (99)
56 3pa8_A Toxin B; CLAN CD cystei 29.0 17 0.0006 25.8 0.9 39 55-94 184-222 (254)
57 3lyc_A Putative pectinase; str 28.4 38 0.0013 22.9 2.6 38 42-80 30-67 (241)
58 1nkw_E 50S ribosomal protein L 27.4 42 0.0014 23.1 2.6 21 60-81 39-59 (212)
59 1k5n_B Beta-2-microglobulin, l 25.8 93 0.0032 17.8 3.7 23 47-69 20-42 (100)
60 1n91_A ORF, hypothetical prote 24.9 1.2E+02 0.0042 18.4 5.2 38 42-81 8-46 (108)
61 3pet_A Putative adhesin; right 23.5 54 0.0018 21.9 2.6 40 39-79 31-71 (221)
62 1ew4_A CYAY protein; friedreic 22.8 66 0.0023 19.5 2.6 16 61-77 28-43 (106)
63 3ljy_A Putative adhesin; struc 22.4 62 0.0021 21.9 2.7 39 39-79 32-71 (243)
64 3gbl_A BETA2-microglobulin; im 21.3 1.2E+02 0.0043 17.2 4.8 32 38-69 5-41 (97)
65 3t3l_A Frataxin, mitochondrial 21.0 77 0.0026 19.9 2.7 16 61-77 40-55 (129)
No 1
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.85 E-value=2.6e-21 Score=129.81 Aligned_cols=93 Identities=68% Similarity=1.150 Sum_probs=74.1
Q ss_pred CCccCCcCCCCCCCCCCCcccc-CCCC----------CCCCCccccccceeeEEECCCeEEEEEEcCCCCCCceEEEEeC
Q 036405 1 MSLIPSIFGNRSVFDPFSSDVW-APLG----------SSSNEVSTFASAQVDWKETREAHVFKADLPGLKKEEVKVEVED 69 (98)
Q Consensus 1 Msl~p~~~~~~~~fd~f~~~~~-~~f~----------~~~~~~~~~~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~ 69 (98)
||++.. ++.|+||+ ++| ++|. +..+.....+.|++||+|++++|+|.++|||++++||+|++.+
T Consensus 1 ms~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~ 75 (151)
T 1gme_A 1 MSIVRR----SNVFDPFA-DLWADPFDTFRSIVPAISGGGSETAAFANARMDWKETPEAHVFKADLPGVKKEEVKVEVED 75 (151)
T ss_dssp -CCCCS----CCCBCTTC-GGGSSHHHHHHHHGGGTTSSCCSHHHHGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEET
T ss_pred Cccccc----ccccCchH-hhhhchhhhhhhhcccccccccccccccCCceEEEEcCCEEEEEEECCCCChHHEEEEEec
Confidence 888832 46888988 777 5542 1112223467899999999999999999999999999999954
Q ss_pred CcEEEEEEEeecccccCCccEEEEecccC
Q 036405 70 GRVLQISGERSVEKEDKNDKWHRVERGRG 98 (98)
Q Consensus 70 g~~L~I~g~~~~~~~~~~~~~~~~Er~~G 98 (98)
|+.|+|+|+++.+.+.++.+|+++||.+|
T Consensus 76 ~~~L~I~g~~~~~~~~~~~~~~~~Er~~g 104 (151)
T 1gme_A 76 GNVLVVSGERTKEKEDKNDKWHRVERSSG 104 (151)
T ss_dssp TTEEEEEECCCCCCCCTTCEEEECCCCCC
T ss_pred CCEEEEEEEEccccccCCceEEEEeEecc
Confidence 46999999998877667889999999987
No 2
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.79 E-value=5.3e-19 Score=110.62 Aligned_cols=63 Identities=33% Similarity=0.590 Sum_probs=58.6
Q ss_pred cccceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEecccC
Q 036405 35 FASAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVERGRG 98 (98)
Q Consensus 35 ~~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er~~G 98 (98)
.|.|++||+|++++|+|.++|||++++||+|++.+ +.|+|+|+++.+.+.++.+|+++||.+|
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~~~~~~~~~~~~~er~~g 64 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDK-GILSIRGERKSESSTETERFSRIERRYG 64 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEET-TEEEEEEEECCGGGSSGGGEEEECCCCE
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEEC-CEEEEEEEEcCcCccCCccEEEEeecce
Confidence 58899999999999999999999999999999997 6999999998877777889999999876
No 3
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.74 E-value=6.4e-18 Score=114.04 Aligned_cols=62 Identities=19% Similarity=0.179 Sum_probs=55.1
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEec-ccC
Q 036405 36 ASAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVER-GRG 98 (98)
Q Consensus 36 ~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er-~~G 98 (98)
..+++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++.....++.+|+++|| .+|
T Consensus 55 ~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~-~~L~I~g~~~~~~~~~~~~~~~~Er~~~g 117 (161)
T 4eld_A 55 GFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVG-DTLEIRAKRSPLMITESERIIYSEIPEEE 117 (161)
T ss_dssp SCCCEEEEECSSEEEEEEECTTCCGGGEEEEEET-TEEEEEEECCCCCCCSSCEEEEECSCCCC
T ss_pred cccceeEEEeCCEEEEEEECCCCChHhEEEEEEC-CEEEEEEEEcccccCCCceEEEEEeeccc
Confidence 3455999999999999999999999999999998 6999999998866656778999999 776
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.69 E-value=2.2e-17 Score=103.91 Aligned_cols=59 Identities=24% Similarity=0.412 Sum_probs=52.4
Q ss_pred ccccceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEecccC
Q 036405 34 TFASAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVERGRG 98 (98)
Q Consensus 34 ~~~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er~~G 98 (98)
+.|.|++||+|++++|+|.++|||++++||+|++++ +.|+|+|+++. +.+|+++||.+|
T Consensus 3 g~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~-~~L~I~g~~~~-----~~~~~~~er~~g 61 (102)
T 4fei_A 3 GPWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDG-GQLTVSGERPG-----TEHLLRSERPSG 61 (102)
T ss_dssp EECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEET-TEEEEEEEECC-----CSSCSSCCSEEE
T ss_pred CcccCcEEEEEcCCEEEEEEECCCCchHhEEEEEEC-CEEEEEEEEec-----CCCEEEEEEecc
Confidence 468899999999999999999999999999999997 69999999854 356888888765
No 5
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.67 E-value=7.8e-17 Score=104.35 Aligned_cols=60 Identities=28% Similarity=0.324 Sum_probs=53.0
Q ss_pred cccceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEeccc
Q 036405 35 FASAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVERGR 97 (98)
Q Consensus 35 ~~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er~~ 97 (98)
.+.|++||+|++++|+|.++|||++++||+|++.+++.|+|+|+++.+. +.+|+++||.|
T Consensus 22 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~---~~~~~~~Er~~ 81 (123)
T 3aab_A 22 LVYPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITE---PGVKYLTQRPK 81 (123)
T ss_dssp HHCSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCC---CSCEEEECSCS
T ss_pred cCCCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccC---CCeEEEEEEeE
Confidence 4679999999999999999999999999999999724999999987654 57899999864
No 6
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.42 E-value=2.4e-13 Score=85.34 Aligned_cols=54 Identities=11% Similarity=0.093 Sum_probs=46.8
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEec
Q 036405 39 QVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVER 95 (98)
Q Consensus 39 ~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er 95 (98)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|+++... ++..|+++|+
T Consensus 3 ~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~--~~~~~~~~eF 56 (101)
T 2wj5_A 3 MAQVPTDPGYFSVLLDVKHFSPEEISVKVVG-DHVEVHARHEERP--DEHGFIAREF 56 (101)
T ss_dssp CCCCCCCSSCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEECS--STTCCEEEEE
T ss_pred cEEEEEeCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEEE
Confidence 5899999999999999999999999999997 5999999987643 2456887773
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.42 E-value=6.5e-13 Score=84.07 Aligned_cols=55 Identities=16% Similarity=0.333 Sum_probs=46.8
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEec
Q 036405 38 AQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVER 95 (98)
Q Consensus 38 p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er 95 (98)
..+||+|++++|+|.++|||++++||+|++.+ +.|+|+|+++...+ +..|+++|+
T Consensus 3 g~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~--~~~~~~~eF 57 (106)
T 3l1e_A 3 GISEVRSDRDKFVIFLDVKHFSPEDLTVKVQE-DFVEIHGKHNERQD--DHGYISREF 57 (106)
T ss_dssp CSEEEEECSSEEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEET--TTEEEEEEE
T ss_pred CceEEEEcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC--CCCEEEEEE
Confidence 46899999999999999999999999999998 69999999765433 345777764
No 8
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.32 E-value=3.3e-12 Score=77.85 Aligned_cols=42 Identities=19% Similarity=0.368 Sum_probs=35.3
Q ss_pred EEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccc
Q 036405 42 WKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKE 84 (98)
Q Consensus 42 i~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~ 84 (98)
+.|++++|+|.++|||++++||+|++.+ +.|+|+|+++...+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~~ 43 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKD-GVVEITGKHAARQD 43 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEET-TEEEEEEEEC----
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccC
Confidence 4689999999999999999999999998 59999999876543
No 9
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.29 E-value=3.9e-12 Score=87.08 Aligned_cols=54 Identities=17% Similarity=0.294 Sum_probs=43.5
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEec
Q 036405 39 QVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVER 95 (98)
Q Consensus 39 ~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er 95 (98)
.+||+|++++|+|.++|||++++||+|++.+ +.|+|+|+++.+.+ +..|+++|+
T Consensus 65 ~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~-~~L~I~g~~~~~~~--~~~~~~reF 118 (175)
T 2klr_A 65 LSEMRLEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQD--EHGFISREF 118 (175)
T ss_dssp ----CCCCSEEEEEECCSSCCGGGEEEEEET-TEEEEEEEEEEEEE--TTEEEEEEE
T ss_pred ceEEEEcCCeEEEEEECCCCChHHEEEEEEC-CEEEEEEEEccccc--CCceEEEEE
Confidence 4799999999999999999999999999998 59999999876542 356888773
No 10
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.26 E-value=1.5e-11 Score=75.52 Aligned_cols=50 Identities=18% Similarity=0.294 Sum_probs=39.7
Q ss_pred EECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEec
Q 036405 43 KETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVER 95 (98)
Q Consensus 43 ~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er 95 (98)
.+++++|+|.++|||++++||+|++.+ +.|+|+|+++... ++..|+++|+
T Consensus 2 k~~~~~~~v~~dlPG~~~edi~V~v~~-~~L~I~g~~~~~~--~~~~~~~~ef 51 (90)
T 2y1y_A 2 AMEKDRFSVNLDVKHFSPEELKVKVLG-DVIEVHGKHEERQ--DEHGFISREF 51 (90)
T ss_dssp ----CCEEEEEECTTSCGGGEEEEEET-TEEEEEEEEEEEE--CSSSEEEEEE
T ss_pred CcCCCEEEEEEECCCCcHHHeEEEEEC-CEEEEEEEEeccc--CCCCEEEEEE
Confidence 368899999999999999999999997 6999999987653 3556888774
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.24 E-value=1.1e-11 Score=91.45 Aligned_cols=48 Identities=17% Similarity=0.169 Sum_probs=43.9
Q ss_pred cccceeeEEECCC----eEEEEEEcCCCCCCceEEEEeCCcEEEEEEEeeccc
Q 036405 35 FASAQVDWKETRE----AHVFKADLPGLKKEEVKVEVEDGRVLQISGERSVEK 83 (98)
Q Consensus 35 ~~~p~~di~e~~~----~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~~~~ 83 (98)
.+.|++||+|+++ +|+|.++|||++++||+|++++ +.|+|+|+++.+.
T Consensus 96 ~~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~-~~L~I~ge~~~~~ 147 (314)
T 2bol_A 96 ELDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADK-NKLVVRAQKSVAC 147 (314)
T ss_dssp TTGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEET-TEEEEEECCBSST
T ss_pred cCCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEEC-CEEEEEEEEeccC
Confidence 4779999999999 9999999999999999999998 6999999987543
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.18 E-value=3e-11 Score=89.26 Aligned_cols=57 Identities=11% Similarity=0.150 Sum_probs=39.1
Q ss_pred cceeeEEECC---CeEEEEEEc-CCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEecccC
Q 036405 37 SAQVDWKETR---EAHVFKADL-PGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVERGRG 98 (98)
Q Consensus 37 ~p~~di~e~~---~~~~i~~el-PG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~Er~~G 98 (98)
....+|.+++ ++|+|.|+| ||++|+||+|+|++ +.|+|+|+++.+.+ .|+++||+||
T Consensus 220 ~~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~-~~LtI~ge~~~~~~----~~~~~Er~~g 280 (314)
T 2bol_A 220 KEGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKG-NKVYVHGVTGKEEK----TENASHSEHR 280 (314)
T ss_dssp CCEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESS-SEEEEEEEEC----------------CE
T ss_pred CCCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEEC-CEEEEEEEEeccCC----ceEEEEEeee
Confidence 3557888765 589999999 99999999999997 69999999877533 5799999987
No 13
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.11 E-value=7.3e-06 Score=49.39 Aligned_cols=42 Identities=17% Similarity=0.292 Sum_probs=38.8
Q ss_pred cceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 37 SAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 37 ~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
.|+++++++++.+.|.+.+||+.++++.|++.. +.|+|++..
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~-~~l~v~~~~ 43 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGE-QILSVVIEV 43 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECS-SBEEEEECC
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEEC-CEEEEEEEc
Confidence 478999999999999999999999999999998 699999864
No 14
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.06 E-value=1.3e-05 Score=50.25 Aligned_cols=43 Identities=21% Similarity=0.352 Sum_probs=39.4
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 36 ASAQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 36 ~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
..|+++|+++++.+.|.+.+||+++++++|.+.+ +.|+|++..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~-~~l~v~~~~ 50 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSE-KELSALVKL 50 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSS-SCEEEEEEC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEc-CEEEEEEEe
Confidence 4578999999999999999999999999999998 699999864
No 15
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.39 E-value=0.001 Score=42.37 Aligned_cols=44 Identities=11% Similarity=0.256 Sum_probs=39.2
Q ss_pred ccccceeeEEECCCeEEEEEEcC-CC-CCCceEEEEeCCcEEEEEEE
Q 036405 34 TFASAQVDWKETREAHVFKADLP-GL-KKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 34 ~~~~p~~di~e~~~~~~i~~elP-G~-~~edi~v~v~~g~~L~I~g~ 78 (98)
+...|.+.++.+.+.+.|.+.|| |+ +++|+.|.+.. +.|+|+.+
T Consensus 16 G~~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~-~~l~v~~~ 61 (124)
T 1wgv_A 16 GAVRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSS-SSIRVAML 61 (124)
T ss_dssp SBCCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECS-SEEEEEEE
T ss_pred CCcCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEc-CEEEEEEE
Confidence 34568999999999999999999 88 89999999998 69999864
No 16
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.10 E-value=0.0013 Score=42.83 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=39.1
Q ss_pred ccceeeEEEC-CCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 36 ASAQVDWKET-REAHVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 36 ~~p~~di~e~-~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
..+.++|+++ .+.+.|.+.++++.++++.|.+.. +.|+|+..-
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~-~~l~v~~~~ 61 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFRE-QDFTLIFQT 61 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECS-SEEEEEECB
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEEC-CEEEEEEEc
Confidence 4689999999 999999999999999999999998 699998753
No 17
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=96.81 E-value=0.0043 Score=39.74 Aligned_cols=43 Identities=19% Similarity=0.336 Sum_probs=38.4
Q ss_pred cccceeeEEECCCeEEEEEEcC-C--CCCCceEEEEeCCcEEEEEEE
Q 036405 35 FASAQVDWKETREAHVFKADLP-G--LKKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 35 ~~~p~~di~e~~~~~~i~~elP-G--~~~edi~v~v~~g~~L~I~g~ 78 (98)
...|.+.++.+.+.+.|.+.|| | ++++|+.|.+.. +.|+|+.+
T Consensus 5 ~~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~-~~l~v~~k 50 (131)
T 1wfi_A 5 SSGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQR-RHLRVGLK 50 (131)
T ss_dssp SSCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEET-TEEEEEET
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeC-CEEEEEEC
Confidence 3568999999999999999999 6 899999999998 69999864
No 18
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=96.80 E-value=0.0038 Score=40.08 Aligned_cols=41 Identities=7% Similarity=0.254 Sum_probs=34.6
Q ss_pred cceeeEEECCCeEEEEEEcC-CCCCCceEEEEeCCcEEEEEEE
Q 036405 37 SAQVDWKETREAHVFKADLP-GLKKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 37 ~p~~di~e~~~~~~i~~elP-G~~~edi~v~v~~g~~L~I~g~ 78 (98)
.|.+.++.+.+.+.|.+.|| |++++++.|.+.. +.|+|..+
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~-~~l~v~~~ 45 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVG-KKICVKNQ 45 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEET-TEEEEEET
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEEC-CEEEEEEC
Confidence 48899999999999999996 8999999999998 68998753
No 19
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.77 E-value=0.0042 Score=39.64 Aligned_cols=42 Identities=17% Similarity=0.340 Sum_probs=37.8
Q ss_pred ccceeeEEECCCeEEEEEEcCCC---CCCceEEEEeCCcEEEEEEE
Q 036405 36 ASAQVDWKETREAHVFKADLPGL---KKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 36 ~~p~~di~e~~~~~~i~~elPG~---~~edi~v~v~~g~~L~I~g~ 78 (98)
..+.++|+.+.+.+.|.+.+||+ .++++.|.+.. +.|+|+..
T Consensus 19 ~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~-~~l~v~~~ 63 (127)
T 1x5m_A 19 KISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTE-RSFDLLVK 63 (127)
T ss_dssp ECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECS-SEEEEEEC
T ss_pred CccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEc-CEEEEEEE
Confidence 34689999999999999999999 89999999997 69999874
No 20
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=96.69 E-value=0.0059 Score=40.51 Aligned_cols=43 Identities=14% Similarity=0.379 Sum_probs=38.2
Q ss_pred cccceeeEEECCCeEEEEEEcC-CCCCCceEEEEeCCcEEEEEEE
Q 036405 35 FASAQVDWKETREAHVFKADLP-GLKKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 35 ~~~p~~di~e~~~~~~i~~elP-G~~~edi~v~v~~g~~L~I~g~ 78 (98)
...|.+.|+.+.+.+.|.+.|| |++++||.|.+.. +.|+|+.+
T Consensus 11 ~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~-~~L~v~~k 54 (157)
T 2rh0_A 11 CGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQS-RHVALAVG 54 (157)
T ss_dssp EECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECS-SEEEEEET
T ss_pred CCCCcEEEEecCCEEEEEEECCCCCcccceEEEEec-CEEEEEEC
Confidence 3568999999999999999998 8999999999998 68888754
No 21
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=96.40 E-value=0.017 Score=36.58 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=38.2
Q ss_pred ccccceeeEEECCCeEEEEEEcCC---CCCCceEEEEeCCcEEEEEEE
Q 036405 34 TFASAQVDWKETREAHVFKADLPG---LKKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 34 ~~~~p~~di~e~~~~~~i~~elPG---~~~edi~v~v~~g~~L~I~g~ 78 (98)
+...|.+.+..+.+.+.|.+.||. ++++|+.|.+.. +.|+|..+
T Consensus 13 G~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~-~~l~v~~k 59 (121)
T 3qor_A 13 GADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQR-RHLRVGLK 59 (121)
T ss_dssp SCBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEET-TEEEEEET
T ss_pred CCcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEc-CEEEEEEc
Confidence 346789999999999999999994 789999999998 68888654
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=96.18 E-value=0.01 Score=37.70 Aligned_cols=39 Identities=18% Similarity=0.268 Sum_probs=34.9
Q ss_pred c-eeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 38 A-QVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 38 p-~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
| .++++.+.+.+.|++.+|++ +++.|.+.. +.|++++.-
T Consensus 3 P~~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~-~~l~~~~~~ 42 (125)
T 1ejf_A 3 PASAKWYDRRDYVFIEFCVEDS--KDVNVNFEK-SKLTFSCLG 42 (125)
T ss_dssp CCCEEEEECSSEEEEEECCTTE--EEEEEEEET-TEEEEEEEE
T ss_pred CCceeEEeCCCEEEEEEEecCC--CceEEEEEC-CEEEEEEEe
Confidence 5 79999999999999999995 799999998 699998763
No 23
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=96.08 E-value=0.011 Score=38.91 Aligned_cols=40 Identities=18% Similarity=0.405 Sum_probs=35.6
Q ss_pred ccceeeEEECCCeEEEEEEcCCCCCCceEEEEe-CCcEEEEEEE
Q 036405 36 ASAQVDWKETREAHVFKADLPGLKKEEVKVEVE-DGRVLQISGE 78 (98)
Q Consensus 36 ~~p~~di~e~~~~~~i~~elPG~~~edi~v~v~-~g~~L~I~g~ 78 (98)
..|.++++.+.+.+.|++.+|++ +++.|++. . +.|++++.
T Consensus 3 ~~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~-~~l~~~~~ 43 (150)
T 2kmw_A 3 RNPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQ-GLFSFSAL 43 (150)
T ss_dssp ECCCEEEEECSSEEEEEECCSSE--EEEEECCCTT-EEEEEEEE
T ss_pred cCCcEEEEeCCCEEEEEEEeCCC--CceEEEEecC-CEEEEEEE
Confidence 35899999999999999999997 58999998 6 58999986
No 24
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=93.00 E-value=0.17 Score=32.95 Aligned_cols=41 Identities=5% Similarity=0.162 Sum_probs=36.0
Q ss_pred cceeeEEECCCeEEEEEEcCCCC--CCceEEEEeCCcEEEEEEE
Q 036405 37 SAQVDWKETREAHVFKADLPGLK--KEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 37 ~p~~di~e~~~~~~i~~elPG~~--~edi~v~v~~g~~L~I~g~ 78 (98)
+|...|..+++.++|.+-+|.++ ..+++|.|++ +.+.....
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~-~~F~F~~~ 45 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS 45 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECS-SSEEECSS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeC-CEEEEecC
Confidence 58999999999999999999999 8999999986 67776543
No 25
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=92.92 E-value=0.094 Score=39.09 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=31.0
Q ss_pred ceeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEE
Q 036405 38 AQVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 38 p~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~ 78 (98)
+++.|... .|.+++.|||++|++|+|.-.+ .-|+|++.
T Consensus 298 ~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~g-deL~v~~g 335 (374)
T 3igf_A 298 KPITIDTH--NRQVRLFLPGFDKKQVKLTQYG-PEVTVEAG 335 (374)
T ss_dssp CSEEEETT--TTEEEEECTTCCGGGCEEEEET-TEEEEEET
T ss_pred CCEEEEec--cEEEEEECCCCCHHHeEEEEEC-CeEEEEEC
Confidence 45555333 8999999999999999999986 58998874
No 26
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=92.26 E-value=0.017 Score=37.23 Aligned_cols=41 Identities=7% Similarity=0.315 Sum_probs=30.3
Q ss_pred ccceeeEEECCCe-------EEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 36 ASAQVDWKETREA-------HVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 36 ~~p~~di~e~~~~-------~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
..|.++++.+.+. +.|++.+|+++ ++.|.+.. +.|++++..
T Consensus 5 ~~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~-~~l~~~~~~ 52 (134)
T 2cg9_X 5 INPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKP-SYIELKAQS 52 (134)
T ss_dssp ------CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCS-SEEEECCEE
T ss_pred cCCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEEC-CEEEEEEec
Confidence 4588999999877 99999999974 88899987 699998764
No 27
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=92.13 E-value=0.68 Score=27.89 Aligned_cols=34 Identities=18% Similarity=0.223 Sum_probs=27.6
Q ss_pred EEEEEEcC-CCCCCceEEEEeCCcEEEEEEEeeccc
Q 036405 49 HVFKADLP-GLKKEEVKVEVEDGRVLQISGERSVEK 83 (98)
Q Consensus 49 ~~i~~elP-G~~~edi~v~v~~g~~L~I~g~~~~~~ 83 (98)
|.-.+.|| +++.+.|+-++.+| +|+|+..+....
T Consensus 63 f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~~ 97 (102)
T 4fei_A 63 FVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRPT 97 (102)
T ss_dssp EEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSCC
T ss_pred EEEEEECCCCcchhHcEEEEECC-EEEEEEEccCcc
Confidence 44467899 58999999999997 999998876543
No 28
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=91.70 E-value=0.91 Score=28.70 Aligned_cols=43 Identities=5% Similarity=0.161 Sum_probs=36.9
Q ss_pred cccceeeEEECCCeEEEEEEcCCCC--CCceEEEEeCCcEEEEEEE
Q 036405 35 FASAQVDWKETREAHVFKADLPGLK--KEEVKVEVEDGRVLQISGE 78 (98)
Q Consensus 35 ~~~p~~di~e~~~~~~i~~elPG~~--~edi~v~v~~g~~L~I~g~ 78 (98)
..+|...|..+++.++|.+-+|-++ ..++++.|++ +.+.....
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~-~~F~F~~~ 59 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQE-NMIIFHLS 59 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEET-TEEEEEET
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeC-CEEEEecC
Confidence 4579999999999999999999977 7899999986 77776653
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=88.21 E-value=1.2 Score=26.03 Aligned_cols=33 Identities=21% Similarity=0.406 Sum_probs=28.1
Q ss_pred CeEEEEEEcC-CCCCCceEEEEe-CCcEEEEEEEee
Q 036405 47 EAHVFKADLP-GLKKEEVKVEVE-DGRVLQISGERS 80 (98)
Q Consensus 47 ~~~~i~~elP-G~~~edi~v~v~-~g~~L~I~g~~~ 80 (98)
..|.=.+.|| +++.+.|+=++. +| +|+|+.-+.
T Consensus 50 ~~F~R~~~LP~~vd~~~i~A~~~~~G-vL~I~lPK~ 84 (85)
T 3q9p_A 50 RCFTRKYTLPPGVDPTQVSSSLSPEG-TLTVEAPMP 84 (85)
T ss_dssp EEEEEEEECCTTCCGGGCEEEECTTS-EEEEEEECC
T ss_pred EEEEEEEECCCCcChHHcEEEECCCC-EEEEEEEcC
Confidence 4688889999 699999999998 87 999997653
No 30
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=88.01 E-value=1.4 Score=28.63 Aligned_cols=35 Identities=23% Similarity=0.332 Sum_probs=28.5
Q ss_pred eEEEEEEcC-CCCCCceEEEEeCCcEEEEEEEeeccc
Q 036405 48 AHVFKADLP-GLKKEEVKVEVEDGRVLQISGERSVEK 83 (98)
Q Consensus 48 ~~~i~~elP-G~~~edi~v~v~~g~~L~I~g~~~~~~ 83 (98)
.|.-++.|| +++.+.|+-++.+| +|+|+..+....
T Consensus 118 ~f~R~~~LP~~vd~~~i~A~~~nG-vL~I~lpK~~~~ 153 (161)
T 4eld_A 118 EIYRTIKLPATVKEENASAKFENG-VLSVILPKAESS 153 (161)
T ss_dssp EEEEEEECSSCBCGGGCEEEEETT-EEEEEEEBCGGG
T ss_pred cEEEEEECCCCcccccEEEEEECC-EEEEEEEcCCCC
Confidence 455567898 69999999999997 999998876543
No 31
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=86.99 E-value=1.8 Score=25.64 Aligned_cols=33 Identities=18% Similarity=0.266 Sum_probs=27.6
Q ss_pred eEEEEEEcCC-CCCCceEEEEeCCcEEEEEEEeec
Q 036405 48 AHVFKADLPG-LKKEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 48 ~~~i~~elPG-~~~edi~v~v~~g~~L~I~g~~~~ 81 (98)
.|.-.+.||. ++.+.|+-++.+| +|+|+-.+..
T Consensus 65 ~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~~ 98 (100)
T 3gla_A 65 SFHRRFALPDSADADGITAAGRNG-VLEIRIPKRP 98 (100)
T ss_dssp EEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC-
T ss_pred EEEEEEECCCCcChHHeEEEEeCC-EEEEEEecCC
Confidence 5677889996 8999999999997 9999987654
No 32
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=86.89 E-value=1.5 Score=26.67 Aligned_cols=34 Identities=21% Similarity=0.386 Sum_probs=29.3
Q ss_pred EEEEEEcC-CCCCCceEEEE-eCCcEEEEEEEeeccc
Q 036405 49 HVFKADLP-GLKKEEVKVEV-EDGRVLQISGERSVEK 83 (98)
Q Consensus 49 ~~i~~elP-G~~~edi~v~v-~~g~~L~I~g~~~~~~ 83 (98)
|.=.+.|| +++.+.|+-++ .+| +|+|+..+....
T Consensus 57 F~R~~~LP~~vd~~~i~A~~s~~G-vL~I~~PK~~~~ 92 (106)
T 3l1e_A 57 FHRRYRLPSNVDQSALSCSLSADG-MLTFSGPKIPSG 92 (106)
T ss_dssp EEEEEECCTTBCTTSCEEEECTTS-EEEEEEEBCCCC
T ss_pred EEEEEECCCCcChhHcEEEECCCC-EEEEEEEccCcc
Confidence 67778999 69999999999 787 999999887653
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=86.69 E-value=1.5 Score=26.35 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=28.3
Q ss_pred EEEEEEcC-CCCCCceEEEE-eCCcEEEEEEEeecc
Q 036405 49 HVFKADLP-GLKKEEVKVEV-EDGRVLQISGERSVE 82 (98)
Q Consensus 49 ~~i~~elP-G~~~edi~v~v-~~g~~L~I~g~~~~~ 82 (98)
|.-.+.|| +++.+.|+-++ .+| +|+|+..+...
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nG-vL~I~lPK~~~ 90 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEG-VLSIQATPASA 90 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTS-EEEEEECBCCC
T ss_pred EEEEEECCCCcChhHCEEEECCCC-EEEEEEECCCc
Confidence 77788999 68999999999 787 99999887554
No 34
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=85.88 E-value=1.9 Score=27.83 Aligned_cols=34 Identities=32% Similarity=0.368 Sum_probs=28.1
Q ss_pred eEEEEEEcC-CCCCCceEEEEeCCcEEEEEEEeecc
Q 036405 48 AHVFKADLP-GLKKEEVKVEVEDGRVLQISGERSVE 82 (98)
Q Consensus 48 ~~~i~~elP-G~~~edi~v~v~~g~~L~I~g~~~~~ 82 (98)
.|.-.+.|| +++.+.|+-++.+| +|+|+..+...
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~~ 139 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAEV 139 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCCC
T ss_pred EEEEEEECCCCccccceEEEEECC-EEEEEEEccCc
Confidence 456677898 58999999999997 99999887654
No 35
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=85.64 E-value=1.2 Score=26.09 Aligned_cols=33 Identities=24% Similarity=0.396 Sum_probs=26.6
Q ss_pred EEEEEEcC-CCCCCceEEEE-eCCcEEEEEEEeecc
Q 036405 49 HVFKADLP-GLKKEEVKVEV-EDGRVLQISGERSVE 82 (98)
Q Consensus 49 ~~i~~elP-G~~~edi~v~v-~~g~~L~I~g~~~~~ 82 (98)
|.=.+.|| +++.+.|+-++ .+| +|+|+..+...
T Consensus 51 f~R~~~LP~~vd~~~i~A~~~~~G-vL~I~~pK~~~ 85 (90)
T 2y1y_A 51 FHRKYRIPADVDPLTITSSMSSDG-VLTVNGPRKQV 85 (90)
T ss_dssp EEEEEECCTTBCGGGCEEEECTTS-EEEEEECBC--
T ss_pred EEEEEECCCCcChhHcEEEECCCC-EEEEEEEcCCC
Confidence 66678898 58999999999 787 99999876543
No 36
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=82.55 E-value=2.3 Score=28.37 Aligned_cols=33 Identities=24% Similarity=0.398 Sum_probs=26.1
Q ss_pred EEEEEEcC-CCCCCceEEEE-eCCcEEEEEEEeecc
Q 036405 49 HVFKADLP-GLKKEEVKVEV-EDGRVLQISGERSVE 82 (98)
Q Consensus 49 ~~i~~elP-G~~~edi~v~v-~~g~~L~I~g~~~~~ 82 (98)
|.=++.|| +++.+.|+-++ .+| +|+|+..+...
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dG-vL~I~lPK~~~ 152 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDG-VLTVNGPRKQV 152 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTS-CEEEEEECC--
T ss_pred EEEEEECCCCcChhHeEEEEcCCC-EEEEEEECCCC
Confidence 44566798 69999999999 687 99999987553
No 37
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=80.69 E-value=2.8 Score=25.90 Aligned_cols=33 Identities=24% Similarity=0.164 Sum_probs=26.3
Q ss_pred eEEEEEEcC-CCCCCce-EEEEeCCcEEEEEEEeec
Q 036405 48 AHVFKADLP-GLKKEEV-KVEVEDGRVLQISGERSV 81 (98)
Q Consensus 48 ~~~i~~elP-G~~~edi-~v~v~~g~~L~I~g~~~~ 81 (98)
.|.=.+.|| +++.+.| +-++.+| +|+|+..+..
T Consensus 82 ~f~R~~~LP~~vd~~~i~~A~~~~G-vL~I~lPK~~ 116 (123)
T 3aab_A 82 YVRKVIRLPYNVAKDAEISGKYENG-VLTIRIPIAG 116 (123)
T ss_dssp EEEEEEECSSEECTTCCCEEEEETT-EEEEEEEGGG
T ss_pred EEEEEEECCCCcCcchhCeeEEcCC-EEEEEEEcCC
Confidence 455556788 4899999 9999997 9999987654
No 38
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=64.08 E-value=4.6 Score=23.22 Aligned_cols=21 Identities=38% Similarity=0.675 Sum_probs=17.4
Q ss_pred CCCCceEEEEeCCcEEEEEEEe
Q 036405 58 LKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 58 ~~~edi~v~v~~g~~L~I~g~~ 79 (98)
|+.+.|.|....| .|+|+|+.
T Consensus 18 Fd~e~i~L~T~~G-~L~IkG~~ 38 (71)
T 2ks0_A 18 FDPKEILLETIQG-VLSIKGEK 38 (71)
T ss_dssp ECSSEEEEEETTE-EEEEEEEC
T ss_pred ECCCEEEEEeCce-EEEEEcCC
Confidence 5778888888887 89999885
No 39
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=63.18 E-value=6.2 Score=24.89 Aligned_cols=27 Identities=11% Similarity=0.163 Sum_probs=22.8
Q ss_pred cCCCCCCceEEEEeCCcEEEEEEEeecc
Q 036405 55 LPGLKKEEVKVEVEDGRVLQISGERSVE 82 (98)
Q Consensus 55 lPG~~~edi~v~v~~g~~L~I~g~~~~~ 82 (98)
.|.+++-.|.|.+++| .+|++|.-...
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~~ 28 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPDE 28 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESCH
T ss_pred CCcccceeEEEEEECC-EEEEEEECCCH
Confidence 4677888999999986 99999997653
No 40
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=61.51 E-value=15 Score=21.93 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=29.3
Q ss_pred CCeEEEEEEcCC-CCCCceEEEEeCCcEEEEEEEeec
Q 036405 46 REAHVFKADLPG-LKKEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 46 ~~~~~i~~elPG-~~~edi~v~v~~g~~L~I~g~~~~ 81 (98)
+..|.+.++|++ +++++-...+.++ .|.|.=.+..
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~-~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLST-KIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSS-SEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECC-EEEEEEEcCC
Confidence 568999999999 7999999999985 8888876643
No 41
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=60.20 E-value=8.7 Score=23.28 Aligned_cols=20 Identities=25% Similarity=0.549 Sum_probs=16.3
Q ss_pred CCceEEEEeCCcEEEEEEEee
Q 036405 60 KEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~ 80 (98)
|+.++|++++ +.++|+|.+-
T Consensus 20 P~gV~V~i~~-~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKG-RTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCc
Confidence 4789999986 7999999653
No 42
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=50.56 E-value=15 Score=19.79 Aligned_cols=22 Identities=9% Similarity=0.238 Sum_probs=17.7
Q ss_pred CCCceEEEEeCCcEEEEEEEeec
Q 036405 59 KKEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 59 ~~edi~v~v~~g~~L~I~g~~~~ 81 (98)
.-+||.|+.+. +++++.|+-+-
T Consensus 31 gyndinvtwdg-dtvtvegqleg 52 (62)
T 2gjh_A 31 GYNDINVTWDG-DTVTVEGQLEG 52 (62)
T ss_dssp TCCSCEEEECS-SCEEEEEECCC
T ss_pred CcccceeEEcC-CEEEEEeEEcC
Confidence 34799999986 69999998654
No 43
>3ho6_A Toxin A; inositol phosphate, enterotoxin; HET: IHP; 1.60A {Clostridium difficile}
Probab=42.00 E-value=8.2 Score=27.66 Aligned_cols=40 Identities=23% Similarity=0.410 Sum_probs=26.8
Q ss_pred EcCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEe
Q 036405 54 DLPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVE 94 (98)
Q Consensus 54 elPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~E 94 (98)
.+||++++.++|+... ..|.|.-+-+...-+..++|+..|
T Consensus 186 ~~~Gi~~~~~~VsA~~-~~v~V~~~GrK~t~d~~g~W~~K~ 225 (267)
T 3ho6_A 186 TLPDVNKNSITIGANQ-YEVRINSEGRKELLAHSGKWINKE 225 (267)
T ss_dssp HSTTCCGGGEEEEECS-SCEEECTTSCEEEECTTSCEECHH
T ss_pred cccCcccccceEEEee-eEEEECCCCCeEeecCCCceeecc
Confidence 4789999999999987 577776543333334456666554
No 44
>2hbp_A Cytoskeleton assembly control protein SLA1; SHD1, NPFX(1,2)D, endocytosis, protein binding; NMR {Saccharomyces cerevisiae}
Probab=40.03 E-value=17 Score=20.71 Aligned_cols=35 Identities=14% Similarity=0.356 Sum_probs=27.2
Q ss_pred eEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEE
Q 036405 41 DWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQI 75 (98)
Q Consensus 41 di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I 75 (98)
-|.+....|.|.|++=|+.-..|.|.-.+|..+.|
T Consensus 7 tWtDrtG~F~VeA~flg~~dgki~LhK~nGv~I~V 41 (68)
T 2hbp_A 7 LWVDRSGTFKVDAEFIGCAKGKIHLHKANGVKIAV 41 (68)
T ss_dssp EEEBSSSCCEEEEEEEEEETTEEEEECTTSCEEEE
T ss_pred EEEcCCCCeEEEEEEEEEeCCEEEEEecCCcEEEe
Confidence 36778889999999999998888888777633333
No 45
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=39.24 E-value=37 Score=23.11 Aligned_cols=41 Identities=17% Similarity=0.254 Sum_probs=27.1
Q ss_pred eeeEEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEee
Q 036405 39 QVDWKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 39 ~~di~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~ 80 (98)
.+.+...+....|+++.+---.+.|++++.+| +|.|+-+..
T Consensus 33 ~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~~ 73 (250)
T 3jx8_A 33 DFEYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKSI 73 (250)
T ss_dssp EEEEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECBC
T ss_pred EEEEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcCC
Confidence 44445554456666666544457899999874 999986643
No 46
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=35.71 E-value=41 Score=19.89 Aligned_cols=22 Identities=9% Similarity=0.279 Sum_probs=16.8
Q ss_pred CCCceEEEEeCCcEEEEEEEeec
Q 036405 59 KKEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 59 ~~edi~v~v~~g~~L~I~g~~~~ 81 (98)
.-+||.|+.+. .++++.|+-+-
T Consensus 75 gyndinvtfdg-dtvtvegqleg 96 (106)
T 1qys_A 75 GYNDINVTFDG-DTVTVEGQLEG 96 (106)
T ss_dssp TCCEEEEEEET-TEEEEEEEC--
T ss_pred CCcceeEEEcC-CeEEEEeEEcC
Confidence 45799999986 69999998644
No 47
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=33.73 E-value=36 Score=22.63 Aligned_cols=21 Identities=19% Similarity=0.357 Sum_probs=16.6
Q ss_pred CCceEEEEeCCcEEEEEEEeec
Q 036405 60 KEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~~ 81 (98)
|+.++|++++ +.++++|.+-.
T Consensus 11 P~gV~V~i~~-~~VtVkGpkG~ 31 (177)
T 1rl6_A 11 PAGVTVTVNG-NTVTVKGPKGE 31 (177)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCeE
Confidence 4788999986 79999996543
No 48
>4a17_E RPL9, 60S ribosomal protein L9; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_E 4a1c_E 4a1e_E
Probab=33.29 E-value=36 Score=22.84 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=17.1
Q ss_pred CCceEEEEeCCcEEEEEEEee
Q 036405 60 KEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~ 80 (98)
|+.++|++++ +.++++|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (188)
T 4a17_E 13 PDKVTITAKQ-RVVEVKGPLG 32 (188)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCcEEEEeC-CEEEEEcCCe
Confidence 5899999986 7999999764
No 49
>3u5e_H L8, RP24, YL11, 60S ribosomal protein L9-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_F 1s1i_H 3izs_F* 3j16_F 3o5h_I 3o58_I 3u5i_H 4b6a_H 3jyw_H
Probab=33.07 E-value=37 Score=22.88 Aligned_cols=20 Identities=30% Similarity=0.642 Sum_probs=16.9
Q ss_pred CCceEEEEeCCcEEEEEEEee
Q 036405 60 KEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~ 80 (98)
|+.++|++++ +.++++|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (191)
T 3u5e_H 13 PEGVTVSIKS-RIVKVVGPRG 32 (191)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCcEEEEeC-CEEEEEcCCe
Confidence 4889999986 7999999764
No 50
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=32.93 E-value=38 Score=22.61 Aligned_cols=21 Identities=19% Similarity=0.397 Sum_probs=16.7
Q ss_pred CCceEEEEeCCcEEEEEEEeec
Q 036405 60 KEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~~ 81 (98)
|+.++|++++ +.++++|.+-.
T Consensus 9 P~gV~v~i~~-~~vtVkGpkG~ 29 (178)
T 1vq8_E 9 PEDVDAEQDH-LDITVEGDNGS 29 (178)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCeE
Confidence 3788999986 79999996543
No 51
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=32.78 E-value=37 Score=22.82 Aligned_cols=20 Identities=35% Similarity=0.606 Sum_probs=16.6
Q ss_pred CCceEEEEeCCcEEEEEEEee
Q 036405 60 KEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~ 80 (98)
|+.++|++++ +.++++|.+-
T Consensus 13 P~gV~v~i~~-~~V~VkGPkG 32 (190)
T 3iz5_F 13 PEGVTVQVAA-KVVTVEGPRG 32 (190)
T ss_dssp CTTCEEEEET-TEEEEEETTE
T ss_pred CCCCEEEEeC-CEEEEECCCc
Confidence 4889999986 7999999764
No 52
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=32.43 E-value=32 Score=22.94 Aligned_cols=20 Identities=25% Similarity=0.429 Sum_probs=16.4
Q ss_pred CCceEEEEeCCcEEEEEEEee
Q 036405 60 KEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~ 80 (98)
|+.++|++++ +.++|+|.+-
T Consensus 12 P~gV~v~i~~-~~v~VkGpkG 31 (180)
T 3v2d_H 12 PKGVSVEVAP-GRVKVKGPKG 31 (180)
T ss_dssp CTTCEEEEET-TEEEEECSSC
T ss_pred CCCcEEEEeC-CEEEEEeCCc
Confidence 4789999986 7999999764
No 53
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=31.83 E-value=30 Score=23.16 Aligned_cols=25 Identities=28% Similarity=0.541 Sum_probs=19.3
Q ss_pred EEEEcCCCCCCceEEEEeCCcEEEEEEEee
Q 036405 51 FKADLPGLKKEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 51 i~~elPG~~~edi~v~v~~g~~L~I~g~~~ 80 (98)
-.+++| +.++|++++ +.++++|.+-
T Consensus 9 ~~I~IP----~gV~v~i~~-~~V~VkGpkG 33 (184)
T 3j21_F 9 EEVEIP----EGVEVTVEG-YKVKVKGPKG 33 (184)
T ss_dssp EEEECC----SSCEEEESS-SEEEEECSSC
T ss_pred EEEeCC----CCcEEEEeC-CEEEEEcCCe
Confidence 345555 889999976 7999999764
No 54
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=30.96 E-value=42 Score=22.59 Aligned_cols=21 Identities=24% Similarity=0.523 Sum_probs=17.1
Q ss_pred CCceEEEEeCCcEEEEEEEeec
Q 036405 60 KEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~~ 81 (98)
|+.++|++++ +.++++|.+-.
T Consensus 13 P~gV~V~i~~-~~VtVkGpkG~ 33 (192)
T 2zkr_e 13 PENVDITLKG-RTVIVKGPRGT 33 (192)
T ss_dssp CTTCEEEEET-TEEEEEETTEE
T ss_pred CCCCEEEEeC-CEEEEECCCeE
Confidence 5889999986 79999996543
No 55
>1lk2_B Beta-2-microglobulin; class I MHC-peptide complex, high resolution, anisotropic AN refinement, immune system; HET: NAG FUC; 1.35A {Mus musculus} SCOP: b.1.1.2 PDB: 1bqh_B 1cd1_B 1fo0_L* 1fzj_B* 1fzm_B* 1fzo_B* 1g6r_L 1fzk_B* 1g7q_B* 1hoc_B 1inq_B 1juf_B 1k8d_B 1kbg_L* 1kj2_L* 1kj3_L 1kpu_B* 1kpv_B* 1ld9_B 1ldp_L* ...
Probab=29.63 E-value=73 Score=18.26 Aligned_cols=24 Identities=4% Similarity=0.360 Sum_probs=19.3
Q ss_pred CeEEEEEEcCCCCCCceEEEEe-CC
Q 036405 47 EAHVFKADLPGLKKEEVKVEVE-DG 70 (98)
Q Consensus 47 ~~~~i~~elPG~~~edi~v~v~-~g 70 (98)
....|...+-|+-+.+|+|+.. +|
T Consensus 19 ~~~~L~C~~~gfyP~~i~v~W~k~g 43 (99)
T 1lk2_B 19 KPNILNCYVTQFHPPHIEIQMLKNG 43 (99)
T ss_dssp SCEEEEEEEEEEBSSCCEEEEEETT
T ss_pred CCEEEEEEEEEEECCCcEEEEEECC
Confidence 4678888889999999999964 44
No 56
>3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B*
Probab=29.01 E-value=17 Score=25.76 Aligned_cols=39 Identities=21% Similarity=0.431 Sum_probs=27.6
Q ss_pred cCCCCCCceEEEEeCCcEEEEEEEeecccccCCccEEEEe
Q 036405 55 LPGLKKEEVKVEVEDGRVLQISGERSVEKEDKNDKWHRVE 94 (98)
Q Consensus 55 lPG~~~edi~v~v~~g~~L~I~g~~~~~~~~~~~~~~~~E 94 (98)
+||+++..|+|+... ..|.|..+-+...-+..++|...|
T Consensus 184 ~~gi~~~~i~VsAr~-~eV~Vn~~GRK~~~d~~g~WvnK~ 222 (254)
T 3pa8_A 184 MPSISQDSIIVSANQ-YEVRINSEGRRELLDHSGEWINKE 222 (254)
T ss_dssp CTTSCGGGEEEEECS-SCEEECTTSCEEEECTTSCEECHH
T ss_pred cccccccceEEEEee-eeEEEcCCCceeeeccCCchhhhh
Confidence 789999999999987 578887554444444566676655
No 57
>3lyc_A Putative pectinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: MSE; 2.30A {Parabacteroides distasonis}
Probab=28.38 E-value=38 Score=22.87 Aligned_cols=38 Identities=13% Similarity=0.193 Sum_probs=22.6
Q ss_pred EEECCCeEEEEEEcCCCCCCceEEEEeCCcEEEEEEEee
Q 036405 42 WKETREAHVFKADLPGLKKEEVKVEVEDGRVLQISGERS 80 (98)
Q Consensus 42 i~e~~~~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~~ 80 (98)
+...+....|+++.+---.+.|++++.+ ++|.|+-+..
T Consensus 30 l~qgd~~~~V~i~~~~nl~~~v~~~v~~-g~L~I~~~~~ 67 (241)
T 3lyc_A 30 YTQSDAPEGLEIKTDRNIFEKYEFNVEN-HKLKIRPKKE 67 (241)
T ss_dssp EEECSSCCEEEEEEEHHHHTTEEEEEET-TEEEEEECGG
T ss_pred EEECCCCceEEEEECccccceEEEEEEC-CEEEEEEcCC
Confidence 3333235555555553334678888887 4888876543
No 58
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=27.39 E-value=42 Score=23.07 Aligned_cols=21 Identities=24% Similarity=0.469 Sum_probs=16.6
Q ss_pred CCceEEEEeCCcEEEEEEEeec
Q 036405 60 KEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 60 ~edi~v~v~~g~~L~I~g~~~~ 81 (98)
++.++|++++ +.++|+|.+-.
T Consensus 39 P~gV~V~i~~-~~VtVKGPkG~ 59 (212)
T 1nkw_E 39 PSGVTVNAQD-GVFKVKGPKGE 59 (212)
T ss_pred CCCcEEEEeC-CEEEEECCCEE
Confidence 4788999986 79999997543
No 59
>1k5n_B Beta-2-microglobulin, light chain; MHC(major histocompatibility complex), HLA(human leukocyte A immune system; 1.09A {Homo sapiens} SCOP: b.1.1.2 PDB: 1a9b_B 1b0g_B 1b0r_B 1bd2_B 1cg9_B 1a9e_B 1duy_B 1eey_B 1eez_B 1efx_B 1gzp_B* 1gzq_B* 1hhg_B 1hhh_B 1hhi_B 1hhj_B 1hhk_B 1i1f_B 1i1y_B 1duz_B* ...
Probab=25.82 E-value=93 Score=17.81 Aligned_cols=23 Identities=9% Similarity=0.403 Sum_probs=19.4
Q ss_pred CeEEEEEEcCCCCCCceEEEEeC
Q 036405 47 EAHVFKADLPGLKKEEVKVEVED 69 (98)
Q Consensus 47 ~~~~i~~elPG~~~edi~v~v~~ 69 (98)
....|...+-||-+.+|+|+...
T Consensus 20 ~~~~L~C~~~gFyP~~i~v~W~k 42 (100)
T 1k5n_B 20 KSNFLNCYVSGFHPSDIEVDLLK 42 (100)
T ss_dssp SCEEEEEEEEEEBSSCCEEEEEE
T ss_pred CcEEEEEEEEeeECCceEEEEEE
Confidence 46889999999999999999653
No 60
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=24.87 E-value=1.2e+02 Score=18.42 Aligned_cols=38 Identities=8% Similarity=0.192 Sum_probs=27.4
Q ss_pred EEECCCeEEEEEEc-CCCCCCceEEEEeCCcEEEEEEEeec
Q 036405 42 WKETREAHVFKADL-PGLKKEEVKVEVEDGRVLQISGERSV 81 (98)
Q Consensus 42 i~e~~~~~~i~~el-PG~~~edi~v~v~~g~~L~I~g~~~~ 81 (98)
+.+.++.+.|.+.+ ||.+++.| ..+.+ ..|.|+-....
T Consensus 8 ~~~~~~~v~l~v~V~P~A~r~~I-~g~~~-~~LkV~v~ApP 46 (108)
T 1n91_A 8 VTVNDDGLVLRLYIQPKASRDSI-VGLHG-DEVKVAITAPP 46 (108)
T ss_dssp EEECSSEEEEEEEEECSSSSCEE-EEECS-SCEEEECCCCS
T ss_pred EEECCCeEEEEEEEeeCCCccee-ecccC-CEEEEEEecCC
Confidence 46677888888776 88888877 45666 48888755443
No 61
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=23.47 E-value=54 Score=21.89 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=25.1
Q ss_pred eeeEEECCC-eEEEEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 39 QVDWKETRE-AHVFKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 39 ~~di~e~~~-~~~i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
.+.+...++ .+.|+++.+---.+.|++++.+| +|.|.-+.
T Consensus 31 ~V~l~qg~~~~~~V~i~g~~nl~~~i~~~v~~g-~L~I~~~~ 71 (221)
T 3pet_A 31 NIYYTQSTDGKTDLQIYGPDNIVALIQVAVKDN-TLFLSIDK 71 (221)
T ss_dssp EEEEEECSSSCCEEEEEEEHHHHTTEEEEEETT-EEEEEECT
T ss_pred EEEEEECCCCcEEEEEEEChhhcceEEEEEECC-EEEEEEcC
Confidence 444444442 56666666533346889999874 89998653
No 62
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=22.78 E-value=66 Score=19.45 Aligned_cols=16 Identities=31% Similarity=0.594 Sum_probs=12.4
Q ss_pred CceEEEEeCCcEEEEEE
Q 036405 61 EEVKVEVEDGRVLQISG 77 (98)
Q Consensus 61 edi~v~v~~g~~L~I~g 77 (98)
.|++++..+| +|||+-
T Consensus 28 ~d~D~e~~~g-VLti~f 43 (106)
T 1ew4_A 28 SDIDCEINGG-VLTITF 43 (106)
T ss_dssp SCCEEEEETT-EEEEEC
T ss_pred CCEeeeccCC-EEEEEE
Confidence 4788888875 888884
No 63
>3ljy_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lipoprotein; HET: PGE; 2.41A {Parabacteroides distasonis}
Probab=22.38 E-value=62 Score=21.89 Aligned_cols=39 Identities=18% Similarity=0.254 Sum_probs=23.5
Q ss_pred eeeEEECCCeEE-EEEEcCCCCCCceEEEEeCCcEEEEEEEe
Q 036405 39 QVDWKETREAHV-FKADLPGLKKEEVKVEVEDGRVLQISGER 79 (98)
Q Consensus 39 ~~di~e~~~~~~-i~~elPG~~~edi~v~v~~g~~L~I~g~~ 79 (98)
.+.+...+ .+. |+++.+---.+.|++++.+| +|.|.-+.
T Consensus 32 ~V~l~qg~-~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~ 71 (243)
T 3ljy_A 32 DFNYEQSD-DPSTVEVTVDQNLHPYVNIEVKDR-VLTIAFKG 71 (243)
T ss_dssp EEEEEECS-SCCEEEEEEEGGGGGGEEEEEETT-EEEEEECS
T ss_pred EEEEEECC-CCcEEEEEECcchhceEEEEEECC-EEEEEEcC
Confidence 34444433 333 66665544457888888874 88887553
No 64
>3gbl_A BETA2-microglobulin; immune response, immunoglobulin domain, MHC I, secreted, immune system; 2.10A {Ctenopharyngodon idella} SCOP: b.1.1.0
Probab=21.30 E-value=1.2e+02 Score=17.16 Aligned_cols=32 Identities=6% Similarity=0.235 Sum_probs=23.7
Q ss_pred ceeeEEEC-----CCeEEEEEEcCCCCCCceEEEEeC
Q 036405 38 AQVDWKET-----REAHVFKADLPGLKKEEVKVEVED 69 (98)
Q Consensus 38 p~~di~e~-----~~~~~i~~elPG~~~edi~v~v~~ 69 (98)
|.+-|+.. +....|...+-||-+.+|.|+...
T Consensus 5 P~V~v~~~~~~~~~~~~~L~C~~~gFyP~~i~v~W~~ 41 (97)
T 3gbl_A 5 PKIQVYSHYPGEYGKENTLICYVSGFHPPDISIELLK 41 (97)
T ss_dssp CEEEEEESSCCCTTCCEEEEEEEECCBSSCEEEEEEE
T ss_pred CEEEEEcCCcccCCCcEEEEEEEcceeCCccEEEEEE
Confidence 55566532 346888999999999999999653
No 65
>3t3l_A Frataxin, mitochondrial; Fe-S cluster biosynthesis, human mitochondria, oxidoreductas; 1.15A {Homo sapiens} SCOP: d.82.2.1 PDB: 3s4m_A 3t3k_A 3t3j_A 3s5f_A 3t3x_A 3t3t_A 3s5e_A 3s5d_A 1ekg_A 1ly7_A
Probab=20.97 E-value=77 Score=19.94 Aligned_cols=16 Identities=31% Similarity=0.457 Sum_probs=12.4
Q ss_pred CceEEEEeCCcEEEEEE
Q 036405 61 EEVKVEVEDGRVLQISG 77 (98)
Q Consensus 61 edi~v~v~~g~~L~I~g 77 (98)
.|++++..+| +|||+-
T Consensus 40 ~d~D~e~~~g-VLti~f 55 (129)
T 3t3l_A 40 EDYDVSFGSG-VLTVKL 55 (129)
T ss_dssp TTCEEEEETT-EEEEEC
T ss_pred cceeeecCCC-EEEEEE
Confidence 5788888875 888874
Done!