BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036407
(576 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 100/170 (58%), Gaps = 11/170 (6%)
Query: 4 RFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQG-EREFYNEL 61
RFS L+ A+D+FS +LG+GGFG V+ L D + VAVK + QG E +F E+
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 62 YFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK---KPPELMEWCKR 118
S+ + ++ + GF P LLVY M+NG++ L + +PP ++W KR
Sbjct: 87 EMISMAVHRN-LLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPP--LDWPKR 141
Query: 119 FSIAVDIAKGIAYLHS-LNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IA+ A+G+AYLH +P +IH D+K +NILLD F A + DFGLA+L
Sbjct: 142 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 191
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSW 488
++RGT+ ++APEY + G SEK DV+ YGV+LL LI G+R + + ++ L+ W
Sbjct: 202 AVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL--ARLANDDDVMLLDW 259
Query: 489 ARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVGMLTG 545
+ L + KL LVD + + E+ I VALLC Q SP RP M EVV ML G
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 98/170 (57%), Gaps = 11/170 (6%)
Query: 4 RFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQG-EREFYNEL 61
RFS L+ A+D+F +LG+GGFG V+ L D VAVK + QG E +F E+
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 62 YFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK---KPPELMEWCKR 118
S+ + ++ + GF P LLVY M+NG++ L + +PP ++W KR
Sbjct: 79 EMISMAVHRN-LLRLRGFCMTPTER--LLVYPYMANGSVASCLRERPESQPP--LDWPKR 133
Query: 119 FSIAVDIAKGIAYLHS-LNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IA+ A+G+AYLH +P +IH D+K +NILLD F A + DFGLA+L
Sbjct: 134 QRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 183
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 2/117 (1%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSW 488
++RG + ++APEY + G SEK DV+ YGV+LL LI G+R + + ++ L+ W
Sbjct: 194 AVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL--ARLANDDDVMLLDW 251
Query: 489 ARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVGMLTG 545
+ L + KL LVD + + E+ I VALLC Q SP RP M EVV ML G
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 86/150 (57%), Gaps = 7/150 (4%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGER--EFYNELYFASLLEQDDHVVSVLGFS 80
+G G FG+V A H VAVK++ ER EF E+ L + +V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN-IVLFMGAV 103
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKK-PPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ P + +V E +S G+L LLHK E ++ +R S+A D+AKG+ YLH+ NPP+
Sbjct: 104 TQPPN--LSIVTEYLSRGSLY-RLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPI 160
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+H D+K N+L+D + K+ DFGL+RLK+
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRLKA 190
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRP 469
GT ++APE +EK DVYS+GV+L L ++P
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLE 68
L A ++F L+G G FG V+ L D + VA+K S QG EF E+ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAK 127
H+VS++GF +R+ M+L+Y+ M NGNL+ L P + M W +R I + A+
Sbjct: 94 HP-HLVSLIGFCD--ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+ YLH+ +IH D+K NILLD NF KI+DFG+++
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISK 187
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 430 MRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSWA 489
++GT+ Y+ PEY G ++EK DVYS+GV+L ++ R + V P + NL WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPR---EMVNLAEWA 256
Query: 490 RHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV 540
NG+L ++VD + + E A+ CL S RPSM +V+
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/159 (38%), Positives = 90/159 (56%), Gaps = 7/159 (4%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLE 68
L A ++F L+G G FG V+ L D + VA+K S QG EF E+ S
Sbjct: 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCR 93
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAK 127
H+VS++GF +R+ M+L+Y+ M NGNL+ L P + M W +R I + A+
Sbjct: 94 HP-HLVSLIGFCD--ERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+ YLH+ +IH D+K NILLD NF KI+DFG+++
Sbjct: 151 GLHYLHT--RAIIHRDVKSINILLDENFVPKITDFGISK 187
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 4/111 (3%)
Query: 430 MRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSWA 489
++GT+ Y+ PEY G ++EK DVYS+GV+L ++ R + V P + NL WA
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAI-VQSLPR---EMVNLAEWA 256
Query: 490 RHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV 540
NG+L ++VD + + E A+ CL S RPSM +V+
Sbjct: 257 VESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 5/149 (3%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGER--EFYNELYFASLLEQDDHVVSVLGFS 80
+G G FG+V A H VAVK++ ER EF E+ L + +V +G
Sbjct: 45 IGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPN-IVLFMGAV 103
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ P + +V E +S G+L L E ++ +R S+A D+AKG+ YLH+ NPP++
Sbjct: 104 TQPPN--LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIV 161
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARLKS 169
H ++K N+L+D + K+ DFGL+RLK+
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 420 KSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRP 469
K+ S+ S GT ++APE +EK DVYS+GV+L L ++P
Sbjct: 189 KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 19/176 (10%)
Query: 3 HRFSYSVLRRAADSFSPSRL------LGQGGFGSVFHATLHDQSVAVK----VMDSGSLQ 52
H FS+ L+ ++F + +G+GGFG V+ +++ +VAVK ++D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 53 GEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL--LHKKPP 110
+++F E+ + Q +++V +LGFSS+ + LVY M NG+L D L L PP
Sbjct: 73 LKQQFDQEIKVMAKC-QHENLVELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 111 ELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ W R IA A GI +LH + IH DIK +NILLD F AKISDFGLAR
Sbjct: 130 --LSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
GT Y+APE G+I+ K D+YS+GV+LL +I G
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 19/176 (10%)
Query: 3 HRFSYSVLRRAADSFSPSRL------LGQGGFGSVFHATLHDQSVAVK----VMDSGSLQ 52
H FS+ L+ ++F + +G+GGFG V+ +++ +VAVK ++D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 53 GEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL--LHKKPP 110
+++F E+ + Q +++V +LGFSS+ + LVY M NG+L D L L PP
Sbjct: 73 LKQQFDQEIKVMAKC-QHENLVELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPP 129
Query: 111 ELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ W R IA A GI +LH + IH DIK +NILLD F AKISDFGLAR
Sbjct: 130 --LSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLAR 181
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
GT Y+APE G+I+ K D+YS+GV+LL +I G
Sbjct: 197 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 99/176 (56%), Gaps = 19/176 (10%)
Query: 3 HRFSYSVLRRAADSFSPSRL------LGQGGFGSVFHATLHDQSVAVK----VMDSGSLQ 52
H FS+ L+ ++F + +G+GGFG V+ +++ +VAVK ++D + +
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 53 GEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL--LHKKPP 110
+++F E+ + Q +++V +LGFSS+ + LVY M NG+L D L L PP
Sbjct: 67 LKQQFDQEIKVMAKC-QHENLVELLGFSSDGDD--LCLVYVYMPNGSLLDRLSCLDGTPP 123
Query: 111 ELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ W R IA A GI +LH + IH DIK +NILLD F AKISDFGLAR
Sbjct: 124 --LSWHMRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLAR 175
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
GT Y+APE G+I+ K D+YS+GV+LL +I G
Sbjct: 191 GTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 97/176 (55%), Gaps = 19/176 (10%)
Query: 3 HRFSYSVLRRAADSFSPSRL------LGQGGFGSVFHATLHDQSVAVK----VMDSGSLQ 52
H FS+ L+ ++F + G+GGFG V+ +++ +VAVK ++D + +
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 53 GEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL--LHKKPP 110
+++F E+ + Q +++V +LGFSS+ + LVY NG+L D L L PP
Sbjct: 64 LKQQFDQEIKVXAKC-QHENLVELLGFSSDGDD--LCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 111 ELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ W R IA A GI +LH + IH DIK +NILLD F AKISDFGLAR
Sbjct: 121 --LSWHXRCKIAQGAANGINFLHENHH--IHRDIKSANILLDEAFTAKISDFGLAR 172
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
GT Y APE G+I+ K D+YS+GV+LL +I G
Sbjct: 188 GTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 22/177 (12%)
Query: 5 FSYSVLRRAADS-FSPSRLLGQGGFGSVFHATL-HDQSV-AVKVMDSGSLQGE------- 54
F S L AD+ + +G+GGFG V L D+SV A+K + G +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 55 REFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME 114
+EF E++ S L + +V + G NP R +V E + G+L LL K P ++
Sbjct: 68 QEFQREVFIMSNLNHPN-IVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP--IK 120
Query: 115 WCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNIL---LDHN--FCAKISDFGLAR 166
W + + +DIA GI Y+ + NPP++H D++ NI LD N CAK++DFGL++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 22/177 (12%)
Query: 5 FSYSVLRRAADS-FSPSRLLGQGGFGSVFHATL-HDQSV-AVKVMDSGSLQGE------- 54
F S L AD+ + +G+GGFG V L D+SV A+K + G +GE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 55 REFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME 114
+EF E++ S L + +V + G NP R +V E + G+L LL K P ++
Sbjct: 68 QEFQREVFIMSNLNHPN-IVKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP--IK 120
Query: 115 WCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNIL---LDHN--FCAKISDFGLAR 166
W + + +DIA GI Y+ + NPP++H D++ NI LD N CAK++DFG ++
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ 177
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 86/158 (54%), Gaps = 21/158 (13%)
Query: 23 LGQGGFGSVFHATL-HDQSV-AVKVMDSGSLQGE-------REFYNELYFASLLEQDDHV 73
+G+GGFG V L D+SV A+K + G +GE +EF E++ S L + +
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN-I 85
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V + G NP R +V E + G+L LL K P ++W + + +DIA GI Y+
Sbjct: 86 VKLYGLMHNPPR----MVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQ 139
Query: 134 SLNPPVIHGDIKPSNIL---LDHN--FCAKISDFGLAR 166
+ NPP++H D++ NI LD N CAK++DF L++
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASLLEQDDH 72
D+ L+G+G +G+V+ +L ++ VAVKV S + F NE +Y L+E D+
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNI 69
Query: 73 VVSVLGFSSNPKRHRM--LLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGI 129
++G RM LLV E NG+L L LH +W +A + +G+
Sbjct: 70 ARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGL 124
Query: 130 AYLHS-------LNPPVIHGDIKPSNILLDHNFCAKISDFGLA------RLKSVGENQNQ 176
AYLH+ P + H D+ N+L+ ++ ISDFGL+ RL GE N
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 177 ADGE 180
A E
Sbjct: 185 AISE 188
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 79
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 80 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 134
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 135 MAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 20 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 76
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 77 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 131
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 132 MAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 22 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 78
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 79 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 133
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 134 MAAEIADGMAYLNA--KKFVHRDLAARNCMVAHDFTVKIGDFGMTR 177
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 79
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 80 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 134
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 135 MAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 79
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 80 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 134
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 135 MAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 79
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 80 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 134
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H D+ N ++ H+F KI DFG+ R
Sbjct: 135 MAAEIADGMAYLNAKK--FVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 24 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 80
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 81 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 135
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H ++ N ++ H+F KI DFG+ R
Sbjct: 136 MAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 85/166 (51%), Gaps = 30/166 (18%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVK-VMDSGSLQGEREFYNELYFASLLE--QD 70
R LGQG FG V+ D VAVK V +S SL+ EF NE AS+++
Sbjct: 23 RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE---ASVMKGFTC 79
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----------KKPPELMEWCKRFS 120
HVV +LG S K L+V ELM++G+L+ L + PP L E +
Sbjct: 80 HHVVRLLGVVS--KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ--- 134
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +IA G+AYL++ +H ++ N ++ H+F KI DFG+ R
Sbjct: 135 MAAEIADGMAYLNA--KKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 334 EP----IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 386
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 387 RDLRAANILVGENLVCKVADFGLARL 412
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 78 EP----IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 130
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 131 RDLRAANILVGENLVCKVADFGLARL 156
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 75 EP----IXIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 127
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARL 153
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 74 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 123
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 124 --YVHRDLRAANILVGENLVCKVADFGLARL 152
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 251 EP----IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 303
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL 329
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 64
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 65 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 123 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 251 EP----IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 303
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL 329
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 76 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 125
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 126 --YVHRDLRAANILVGENLVCKVADFGLARL 154
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 69
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 70 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 128 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 176
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 72
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 73 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 131 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 73
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 74 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 132 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 66
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 67 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 125 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 173
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 72
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 73 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 130
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 131 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 179
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 73
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 74 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 131
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 132 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 79
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 80 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 138 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 79
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 80 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 137
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 138 SKMIQMAGEIADGMAYLNANK--FVHRDLAARNCMVAEDFTVKIGDFGMTR 186
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 70
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 71 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 128
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 129 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 177
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E MS G+L D L + + + + +A IA G+AY+ +N +H
Sbjct: 251 EP----IYIVGEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN--YVH 303
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 304 RDLRAANILVGENLVCKVADFGLARL 329
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 101
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 102 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 159
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N ++ +F KI DFG+ R
Sbjct: 160 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVAEDFTVKIGDFGMTR 208
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E + + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARL 163
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 85 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D+ +NIL+ N K++DFGLARL
Sbjct: 135 --YVHRDLAAANILVGENLVCKVADFGLARL 163
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 24/171 (14%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLH-------DQSVAVKVMDSGSLQGER-EFYNELYFA 64
A + + SR LGQG FG V+ + VA+K ++ + ER EF NE A
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE---A 66
Query: 65 SLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELM--EW 115
S++++ + HVV +LG S + L++ ELM+ G+L+ L +P P L
Sbjct: 67 SVMKEFNCHHVVRLLGVVS--QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K +A +IA G+AYL++ +H D+ N + +F KI DFG+ R
Sbjct: 125 SKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCXVAEDFTVKIGDFGMTR 173
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 18/171 (10%)
Query: 17 FSPSRL-----LGQGGFGSVFHATLHDQSVAVKVMDS---GSLQGEREFYNELYFASLLE 68
F PS L LG+G FG T H ++ V VM + +R F E+ LE
Sbjct: 7 FRPSDLIHGEVLGKGCFGQAIKVT-HRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE 65
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ V+ +G KR + + E + G L+ + K W +R S A DIA G
Sbjct: 66 HPN-VLKFIGVLYKDKR--LNFITEYIKGGTLRGII--KSMDSQYPWSQRVSFAKDIASG 120
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
+AYLHS+N +IH D+ N L+ N ++DFGLARL + + + Q +G
Sbjct: 121 MAYLHSMN--IIHRDLNSHNCLVRENKNVVVADFGLARL--MVDEKTQPEG 167
Score = 29.3 bits (64), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIA 465
G ++APE G EK DV+S+G++L +I
Sbjct: 184 GNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG 217
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E M+ G+L D L + + + + ++ IA G+AY+ +N +H
Sbjct: 82 EP----IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN--YVH 134
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARL 160
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
P + +V E M+ G+L D L + + + + ++ IA G+AY+ +N +H
Sbjct: 82 EP----IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERMN--YVH 134
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D++ +NIL+ N K++DFGLARL
Sbjct: 135 RDLRAANILVGENLVCKVADFGLARL 160
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LGQG FG V+ T + + VA+K + G++ E F E L + V S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE-AFLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-----HKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
P + +V E MS G+L D L + + P+L++ +A IA G+AY+ +N
Sbjct: 252 EP----IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVD------MAAQIASGMAYVERMN 301
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D++ +NIL+ N K++DFGL RL
Sbjct: 302 --YVHRDLRAANILVGENLVCKVADFGLGRL 330
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ AT + + VAVK M GS+ E F E L+ D V
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLV 73
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----KKP-PELMEWCKRFSIAVDIAKG 128
+ P + ++ E M+ G+L D L K+P P+L+++ + IA+G
Sbjct: 74 KLHAVVTKEP----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF------SAQIAEG 123
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+A++ N IH D++ +NIL+ + KI+DFGLAR+
Sbjct: 124 MAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARV 160
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ AT + + VAVK M GS+ E F E L+ D V
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLV 240
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----KKP-PELMEWCKRFSIAVDIAKG 128
+ P + ++ E M+ G+L D L K+P P+L+++ + IA+G
Sbjct: 241 KLHAVVTKEP----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF------SAQIAEG 290
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+A++ N IH D++ +NIL+ + KI+DFGLAR+
Sbjct: 291 MAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARV 327
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 19/159 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ AT + + VAVK M GS+ E F E L+ D V
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE-AFLAEANVMKTLQHDKLV 246
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH----KKP-PELMEWCKRFSIAVDIAKG 128
+ P + ++ E M+ G+L D L K+P P+L+++ + IA+G
Sbjct: 247 KLHAVVTKEP----IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF------SAQIAEG 296
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+A++ N IH D++ +NIL+ + KI+DFGLAR+
Sbjct: 297 MAFIEQRN--YIHRDLRAANILVSASLVCKIADFGLARV 333
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 19/159 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLH-DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ T + + VA+K + G++ E F E L+ D V
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLV 67
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK-----KPPELMEWCKRFSIAVDIAKG 128
S P + +V E M+ G+L D L K P L++ +A +A G
Sbjct: 68 QLYAVVSEEP----IYIVTEYMNKGSLLDFLKDGEGRALKLPNLVD------MAAQVAAG 117
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+AY+ +N IH D++ +NIL+ + KI+DFGLARL
Sbjct: 118 MAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARL 154
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 425 TSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIA-GRRP 469
T+ + + + APE G + K DV+S+G+LL L+ GR P
Sbjct: 161 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 79/165 (47%), Gaps = 26/165 (15%)
Query: 21 RLLGQGGFGSVFHATLHDQS-------VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
R LG+G FG VF A ++ VAVK + S ++F+ E + L Q +H+
Sbjct: 19 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHI 77
Query: 74 VSVLGFS--SNPKRHRMLLVYELMSNGNLQ--------DALLHKK--PPELMEWCKRFSI 121
V G +P +++V+E M +G+L DA+L + PP + + I
Sbjct: 78 VKFYGVCVEGDP----LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A IA G+ YL S + +H D+ N L+ N KI DFG++R
Sbjct: 134 AQQIAAGMVYLASQH--FVHRDLATRNCLVGENLLVKIGDFGMSR 176
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 75/149 (50%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V Q VAVK++ GS+ E EF+ E A + + H V +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQE---AQTMMKLSHPKLVKFYGV 71
Query: 82 NPKRHRMLLVYELMSNGNLQDALL-HKK---PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K + + +V E +SNG L + L H K P +L+E C D+ +G+A+L S
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC------YDVCEGMAFLESHQ- 124
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N L+D + C K+SDFG+ R
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTR 152
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 23 LGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVS 75
LG+G FG VF A H+ VAVK + S ++F E ++L Q H+V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVR 107
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP------------PELMEWCKRFSIAV 123
G + + +L+V+E M +G+L L P P + + ++A
Sbjct: 108 FFGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A G+ YL L+ +H D+ N L+ KI DFG++R
Sbjct: 166 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSR 206
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 425 TSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRAN 484
T + +G+ ++APE G + SEKCDV+S+G++L +I R+P G P A
Sbjct: 158 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AF 211
Query: 485 LMSWARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVGMLT 544
+ WA H LI+ + + + + R C K P+ RPSMEE+V ++T
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIMT 259
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 22 LLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
++G+G FG V A + VA+K ++S S + + F EL S + + +V + G
Sbjct: 15 VVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPN-IVKLYGACL 71
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP-PVI 140
NP + LV E G+L + L +P S + ++G+AYLHS+ P +I
Sbjct: 72 NP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 127
Query: 141 HGDIKPSNILL-DHNFCAKISDFGLA 165
H D+KP N+LL KI DFG A
Sbjct: 128 HRDLKPPNLLLVAGGTVLKICDFGTA 153
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 80/156 (51%), Gaps = 18/156 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVMDSGSLQGER-EFYNELYFASLLEQDDH- 72
+++G G FG V+ L S VA+K + +G + +R +F E A ++ Q H
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGE---AGIMGQFSHH 106
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ + G S K M+++ E M NG L D L +K E + + IA G+ Y
Sbjct: 107 NIIRLEGVIS--KYKPMMIITEYMENGAL-DKFLREKDGEF-SVLQLVGMLRGIAAGMKY 162
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
L ++N +H D+ NIL++ N K+SDFGL+R+
Sbjct: 163 LANMN--YVHRDLAARNILVNSNLVCKVSDFGLSRV 196
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVMDSGS-LQGEREFYNE-LYFASLLEQDDH 72
++LG G FG+V+ + VA+K+++ + + EF +E L AS+ H
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM--DHPH 101
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKG 128
+V +LG +P + LV +LM +G L + + K L+ WC V IAKG
Sbjct: 102 LVRLLGVCLSPT---IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKG 152
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
+ YL ++H D+ N+L+ KI+DFGLARL E + ADG
Sbjct: 153 MMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 201
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 425 TSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRAN 484
T + +G+ ++APE G + SEKCDV+S+G++L +I R+P G P A
Sbjct: 159 THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP------AF 212
Query: 485 LMSWARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVGMLT 544
+ WA H LI+ + + + + R C K P+ RPSMEE+V ++T
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIESLMTR------------CWSKDPSQRPSMEEIVKIMT 260
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 73/146 (50%), Gaps = 9/146 (6%)
Query: 22 LLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
++G+G FG V A + VA+K ++S S + + F EL S + + +V + G
Sbjct: 16 VVGRGAFGVVCKAKWRAKDVAIKQIESESER--KAFIVELRQLSRVNHPN-IVKLYGACL 72
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP-PVI 140
NP + LV E G+L + L +P S + ++G+AYLHS+ P +I
Sbjct: 73 NP----VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALI 128
Query: 141 HGDIKPSNILL-DHNFCAKISDFGLA 165
H D+KP N+LL KI DFG A
Sbjct: 129 HRDLKPPNLLLVAGGTVLKICDFGTA 154
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 23 LGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVS 75
LG+G FG VF A H+ VAVK + S ++F E ++L Q H+V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVR 78
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP------------PELMEWCKRFSIAV 123
G + + +L+V+E M +G+L L P P + + ++A
Sbjct: 79 FFGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A G+ YL L+ +H D+ N L+ KI DFG++R
Sbjct: 137 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSR 177
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 23 LGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVS 75
LG+G FG VF A H+ VAVK + S ++F E ++L Q H+V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-QHQHIVR 84
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP------------PELMEWCKRFSIAV 123
G + + +L+V+E M +G+L L P P + + ++A
Sbjct: 85 FFGVCTEGRP--LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A G+ YL L+ +H D+ N L+ KI DFG++R
Sbjct: 143 QVAAGMVYLAGLH--FVHRDLATRNCLVGQGLVVKIGDFGMSR 183
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGLAR+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLARV 196
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
A R++G G FG V L D +VA+K + G + +R + L AS++
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDF--LCEASIMG 99
Query: 69 QDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
Q DH VV + G + K +++V E M NG L DA L K + + + IA
Sbjct: 100 QFDHPNVVHLEGVVTRGKP--VMIVIEFMENGAL-DAFLRKHDGQFTV-IQLVGMLRGIA 155
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 156 AGMRYLADMG--YVHRDLAARNILVNSNLVCKVSDFGLSRV 194
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 71
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 127
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 167
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 88
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 89 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 144
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 145 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 184
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 81/167 (48%), Gaps = 25/167 (14%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------ELMEWCKRF 119
+V++LG ++ +L++ E G+L + L K+PP E +
Sbjct: 112 IVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLL 169
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 170 HFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 15 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 71
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKP--VMIVTEXMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 127
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 128 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 167
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVMDSGS-LQGEREFYNE-LYFASLLEQDDH 72
++LG G FG+V+ + VA+K+++ + + EF +E L AS+ H
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM--DHPH 78
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKG 128
+V +LG +P + LV +LM +G L + + K L+ WC V IAKG
Sbjct: 79 LVRLLGVCLSPT---IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWC------VQIAKG 129
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
+ YL ++H D+ N+L+ KI+DFGLARL E + ADG
Sbjct: 130 MMYLEERR--LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG 178
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVM-DSGSLQGEREFYNELYFASLLEQDDHV 73
++LG G FG+V+ VA+KV+ ++ S + +E +E Y + + +V
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYV 81
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGI 129
+LG LV +LM G L D + + +L+ WC + IAKG+
Sbjct: 82 SRLLGICLTSTVQ---LVTQLMPYGCLLDHVRENRGRLGSQDLLNWC------MQIAKGM 132
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
+YL + ++H D+ N+L+ KI+DFGLARL + E + ADG
Sbjct: 133 SYLEDVR--LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG 180
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEXMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--AVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--FVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 42 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 98
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 99 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 154
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 155 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 194
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEXMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 82/181 (45%), Gaps = 31/181 (17%)
Query: 19 PSRLL---GQGGFGSVFHATLHDQSVAVKVM---DSGSLQGEREFYNELYFASLLEQDDH 72
P +LL +G FG V+ A L ++ VAVK+ D S Q E E Y+ L H
Sbjct: 25 PLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYS-------LPGMKH 77
Query: 73 VVSVLGFSSNPKRHR-----MLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
++L F KR + L+ G+L D L ++ W + IA +A+
Sbjct: 78 E-NILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMAR 132
Query: 128 GIAYLHS--------LNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
G+AYLH P + H DIK N+LL +N A I+DFGLA G++ G
Sbjct: 133 GLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHG 192
Query: 180 E 180
+
Sbjct: 193 Q 193
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 83
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 84 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 139
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARL 166
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 81
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 137
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 196
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 75
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 131
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 81
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 82 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 137
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARL 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 77
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 78 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 133
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARL 160
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 85
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 86 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 141
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARL 168
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A + S +++G G FG V L + SVA+K + G + +R +F E AS++
Sbjct: 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE---ASIM 100
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K +++V E M NG+L D+ L K + + + I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKP--VMIVTEYMENGSL-DSFLRKHDAQFTV-IQLVGMLRGI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
A G+ YL + +H D+ NIL++ N K+SDFGL R+
Sbjct: 157 ASGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLGRV 196
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 80
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 81 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 136
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARL 163
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 84
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 85 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 140
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARL 167
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 75
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 131
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 75
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 131
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 76
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 77 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 132
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARL 159
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 70
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 71 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 126
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARL 153
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ ++ + VAVK + G++ + F E A+L++ H
Sbjct: 12 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEE---ANLMKTLQHD 67
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V ++ K + ++ E M+ G+L D L + +++ K + IA+G+AY+
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE 126
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
N IH D++ +N+L+ + KI+DFGLAR+
Sbjct: 127 RKN--YIHRDLRAANVLVSESLMCKIADFGLARV 158
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-------MEWCKRFSIAVDI 125
+V++LG ++ +L++ E G+L + L K +L +E + +
Sbjct: 112 IVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 170 AQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 208
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + +R+F E+ L D +V
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 77
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G S P R + LV E + +G L+D L + ++ + + I KG+ YL S
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR 135
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D+ NIL++ KI+DFGLA+L
Sbjct: 136 --CVHRDLAARNILVESEAHVKIADFGLAKL 164
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + +R+F E+ L D +V
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 76
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G S P R + LV E + +G L+D L + ++ + + I KG+ YL S
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR 134
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D+ NIL++ KI+DFGLA+L
Sbjct: 135 --CVHRDLAARNILVESEAHVKIADFGLAKL 163
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 19/161 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-------MEWCKRFSIAVDI 125
+V++LG ++ +L++ E G+L + L K +L +E + +
Sbjct: 104 IVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 162 AQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 200
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + +R+F E+ L D +V
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 73
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G S P R + LV E + +G L+D L + ++ + + I KG+ YL S
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR 131
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D+ NIL++ KI+DFGLA+L
Sbjct: 132 --CVHRDLAARNILVESEAHVKIADFGLAKL 160
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 81/181 (44%), Gaps = 28/181 (15%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQG---EREFYNELYFA 64
S+ R A + +G+G +G V+ H +SVAVK+ S Q E E YN +
Sbjct: 1 SMQRTVARQVALVECVGKGRYGEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTV--- 57
Query: 65 SLLEQDDHVVSVLGF-----SSNPKRHRMLLVYELMSNGNLQDALLHKK-PPELMEWCKR 118
LL D+ +LGF +S ++ L+ +G+L D L + P L
Sbjct: 58 -LLRHDN----ILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----- 107
Query: 119 FSIAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGE 172
+AV A G+A+LH P + H D K N+L+ N I+D GLA + S G
Sbjct: 108 LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGS 167
Query: 173 N 173
+
Sbjct: 168 D 168
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 73/151 (48%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + +R+F E+ L D +V
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-HSDFIVKY 89
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G S P R + LV E + +G L+D L + ++ + + I KG+ YL S
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHR--ARLDASRLLLYSSQICKGMEYLGSRR 147
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+H D+ NIL++ KI+DFGLA+L
Sbjct: 148 --CVHRDLAARNILVESEAHVKIADFGLAKL 176
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 76
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 77 NPHVCRLLGICLTSTVQ---LIMQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQI 127
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 128 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD- 109
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 110 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 160
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 161 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 212
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 85
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 86 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 136
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 137 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 188
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTST---VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 89/189 (47%), Gaps = 28/189 (14%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR-LKSV 170
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR + ++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 171 GENQNQADG 179
+N +G
Sbjct: 211 DYYKNTTNG 219
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 76
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 77 NPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 127
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 128 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 179
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 25/166 (15%)
Query: 21 RLLGQGGFGSVFHATLHDQS-------VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
R LG+G FG VF A ++ S VAVK + +L ++F E + L Q +H+
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHI 79
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-------------MEWCKRFS 120
V G + +++V+E M +G+L L P + + +
Sbjct: 80 VKFYGVCGDGDP--LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IA IA G+ YL S + +H D+ N L+ N KI DFG++R
Sbjct: 138 IASQIASGMVYLASQH--FVHRDLATRNCLVGANLLVKIGDFGMSR 181
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 77
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 78 NPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 128
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 78
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 79 NPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 129
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 79
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 80 NPHVCRLLGICLT---STVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 130
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 131 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 182
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 82
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 83 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 133
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 69
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 70 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 120
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 121 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 172
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 77
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 78 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 128
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 180
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+S + LG G FG V+ ++ + VAVK + G++ + F E A+L++ H
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQ-AFLEE---ANLMKTLQHD 68
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V ++ + + ++ E M+ G+L D L + +++ K + IA+G+AY+
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVL-LPKLIDFSAQIAEGMAYIE 127
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
N IH D++ +N+L+ + KI+DFGLAR+
Sbjct: 128 RKN--YIHRDLRAANVLVSESLMCKIADFGLARV 159
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 78
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 79 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 129
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 81
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 82 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 132
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 133 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 184
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 78
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 79 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 129
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASLLEQ 69
+ FS R++G+GGFG V+ D + A+K +D + QGE NE SL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D V + ++ + +LM+ G+L L + E RF A +I G+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRF-YAAEIILGL 305
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
++H N V++ D+KP+NILLD + +ISD GLA
Sbjct: 306 EHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASLLEQ 69
+ FS R++G+GGFG V+ D + A+K +D + QGE NE SL+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D V + ++ + +LM+ G+L L + E RF A +I G+
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRF-YAAEIILGL 304
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
++H N V++ D+KP+NILLD + +ISD GLA
Sbjct: 305 EHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 80/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 100
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 101 NPHVCRLLGICLT---STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 151
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 152 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 203
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 78
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 79 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 129
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 130 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 181
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 21 RLLGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
R LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIV 77
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
G + R + L+ E + G+L++ L +K E ++ K I KG+ YL +
Sbjct: 78 KYKGVCYSAGRRNLKLIMEFLPYGSLREYL--QKHKERIDHIKLLQYTSQICKGMEYLGT 135
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 136 --KRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 135
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASLLEQ 69
+ FS R++G+GGFG V+ D + A+K +D + QGE NE SL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D V + ++ + +LM+ G+L L + E RF A +I G+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRF-YAAEIILGL 305
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
++H N V++ D+KP+NILLD + +ISD GLA
Sbjct: 306 EHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASLLEQ 69
+ FS R++G+GGFG V+ D + A+K +D + QGE NE SL+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D V + ++ + +LM+ G+L L + E RF A +I G+
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRF-YAAEIILGL 305
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
++H N V++ D+KP+NILLD + +ISD GLA
Sbjct: 306 EHMH--NRFVVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 75
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 131
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 132 KRYIHRDLATRNILVENENRVKIGDFGLTKV 162
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 74
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 130
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 131 KRYIHRDLATRNILVENENRVKIGDFGLTKV 161
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 81
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 137
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 138 KRYIHRDLATRNILVENENRVKIGDFGLTKV 168
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 83
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 139
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 140 KRYIHRDLATRNILVENENRVKIGDFGLTKV 170
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 82
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 138
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 139 KRYIHRDLATRNILVENENRVKIGDFGLTKV 169
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 3 HRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-E 56
H F+ + A + R++G G FG V L + VA+K + G + +R +
Sbjct: 13 HEFAKEI---EASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRD 69
Query: 57 FYNELYFASLLEQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME 114
F E AS++ Q DH ++ + G + K +++V E M NG+L D L K +
Sbjct: 70 FLGE---ASIMGQFDHPNIIHLEGVVTKSKP--VMIVTEYMENGSL-DTFLKKNDGQFTV 123
Query: 115 WCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+ + I+ G+ YL + +H D+ NIL++ N K+SDFGL+R+
Sbjct: 124 -IQLVGMLRGISAGMKYLSDMG--YVHRDLAARNILINSNLVCKVSDFGLSRV 173
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 78/147 (53%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 71
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 72 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 127
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H +++ +NIL+ KI+DFGLARL
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARL 154
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 21 RLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDH-- 72
+++G G FG V L + VA+K + SG + +R +F +E AS++ Q DH
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE---ASIMGQFDHPN 95
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V+ + G + K ++++ E M NG+L D+ L + + + + IA G+ YL
Sbjct: 96 VIHLEGVVT--KSTPVMIITEFMENGSL-DSFLRQNDGQFTV-IQLVGMLRGIAAGMKYL 151
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+N +H D+ NIL++ N K+SDFGL+R
Sbjct: 152 ADMN--YVHRDLAARNILVNSNLVCKVSDFGLSRF 184
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 107
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 163
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 164 KRYIHRDLATRNILVENENRVKIGDFGLTKV 194
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 99
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 100 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 152
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 183
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 43 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 98
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 99 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 151
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 182
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIITLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 80
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 136
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 137 KRYIHRDLATRNILVENENRVKIGDFGLTKV 167
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 76
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 132
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 133 KRYIHRDLATRNILVENENRVKIGDFGLTKV 163
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 150
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 94
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 150
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 151 KRYIHRDLATRNILVENENRVKIGDFGLTKV 181
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 20 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 75
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 76 YSTKPQ----LAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHA--KS 128
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKS 159
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 77 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 129
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 18 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 73
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 74 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 126
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 157
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 21 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 77 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 129
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 160
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 71
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 72 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 124
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 27/167 (16%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---------- 122
+V++LG ++ +L++ E G+L + L ++ ++E F+IA
Sbjct: 112 IVNLLGACTHGGP--VLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRDLL 167
Query: 123 ---VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 168 HFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 141 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 251
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 27/167 (16%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---------- 122
+V++LG ++ +L++ E G+L + L ++ ++E F+IA
Sbjct: 112 IVNLLGACTHGGP--VLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 123 ---VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 168 HFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 212
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 71
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 72 YSTAPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 124
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA +KS
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKS 155
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 22 LLGQGGFGSVFHATLHDQSV----AVKVM-DSGSLQGEREFYNELYFASLLEQDDHVVSV 76
++G+G FG V A + + A+K M + S R+F EL L +++++
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 91
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA-------------- 122
LG + R + L E +GNL D L + ++E F+IA
Sbjct: 92 LGACEH--RGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 146
Query: 123 --VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSV 170
D+A+G+ YL IH D+ NIL+ N+ AKI+DFGL+R + V
Sbjct: 147 FAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 194
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 22 LLGQGGFGSVFHATLHDQSV----AVKVM-DSGSLQGEREFYNELYFASLLEQDDHVVSV 76
++G+G FG V A + + A+K M + S R+F EL L +++++
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 81
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA-------------- 122
LG + R + L E +GNL D L + ++E F+IA
Sbjct: 82 LGACEH--RGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 136
Query: 123 --VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSV 170
D+A+G+ YL IH D+ NIL+ N+ AKI+DFGL+R + V
Sbjct: 137 FAADVARGMDYLSQ--KQFIHRDLAARNILVGENYVAKIADFGLSRGQEV 184
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 7 YSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFA 64
+ V R A + +G+G +G V+ + ++VAVK+ S + E+ ++ ELY
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFRETELYNT 85
Query: 65 SLLEQDDHVVSVLGF--SSNPKRH---RMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
+L ++ +LGF S RH ++ L+ G+L D L ++
Sbjct: 86 VMLRHEN----ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCL 137
Query: 120 SIAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
I + IA G+A+LH P + H D+K NIL+ N I+D GLA + S N
Sbjct: 138 RIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTN 197
Query: 174 Q 174
Q
Sbjct: 198 Q 198
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFAS 65
S+ R A + +G+G +G V+ + ++VAVK+ S + E+ ++ ELY
Sbjct: 1 SMQRTVAHQITLLECVGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFRETELYNTV 57
Query: 66 LLEQDDHVVSVLGF--SSNPKRH---RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS 120
+L ++ +LGF S RH ++ L+ G+L D L ++
Sbjct: 58 MLRHEN----ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLR 109
Query: 121 IAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQ 174
I + IA G+A+LH P + H D+K NIL+ N I+D GLA + S NQ
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 82 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLTARNVLVTENNVMKIADFGLAR 192
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 72
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 73 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 123
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
A+G+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 124 AEGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 175
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 87 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 197
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++ +LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIIHLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 84 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 194
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + +++ Y S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYA--SKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 11/147 (7%)
Query: 23 LGQGGFGSVFHATLHDQS-VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G G V+ + + VAVK + GS+ + F E A+L++Q H ++ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAE---ANLMKQLQHQ-RLVRLYA 75
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ + ++ E M NG+L D L K P + + K +A IA+G+A++ N I
Sbjct: 76 VVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN--YI 131
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARL 167
H D++ +NIL+ KI+DFGLARL
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARL 158
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N +I+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMRIADFGLAR 205
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFAS 65
S+ R A + +G+G +G V+ + ++VAVK+ S + E+ ++ ELY
Sbjct: 1 SMQRTVARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSS---RDEKSWFRETELYNTV 57
Query: 66 LLEQDDHVVSVLGF--SSNPKRH---RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS 120
+L ++ +LGF S RH ++ L+ G+L D L ++
Sbjct: 58 MLRHEN----ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL----QLTTLDTVSCLR 109
Query: 121 IAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQ 174
I + IA G+A+LH P + H D+K NIL+ N I+D GLA + S NQ
Sbjct: 110 IVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ 169
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 77
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 78 NPHVCRLLGICLTST---VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 128
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGERE-FYNELYFASL 66
+ S + LG G FG V AT + +VAVK++ + ERE +EL S
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 67 LEQDDHVVSVLGFSS--NPKRHRMLLVYELMSNGNLQDALLHKK--------PPELMEWC 116
L ++V++LG + P L++ E G+L + L K+ P +ME
Sbjct: 99 LGNHMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 117 KRF-------SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S + +AKG+A+L S N IH D+ NILL H KI DFGLAR
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 87
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 88 YSTKPQ----LAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHA--KS 140
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA KS
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++L G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 82
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 83 NPHVCRLLGICLTSTVQ---LIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 133
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 23 LGQGGFGSVF--HATLHDQSVAVKVMDSGSLQG-------EREFYNELYFASLLEQDDHV 73
LG G FG V L VAVK+++ ++ +RE N F + H+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-----RHPHI 73
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + S P +V E +S G L D + E ME + F I + Y H
Sbjct: 74 IKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH 128
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAELES 190
V+H D+KP N+LLD + AKI+DFGL+ + S GE + G A E+ S
Sbjct: 129 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVIS 183
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 44 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 99
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 100 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 152
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA KS
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 183
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 77
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 78 NPHVCRLLGICLTST---VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 128
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 79
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 80 NPHVCRLLGICLTST---VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 130
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 131 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 182
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 77
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L +K E ++ K I KG+ YL +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QKHKERIDHIKLLQYTSQICKGMEYLGT-- 133
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH ++ NIL+++ KI DFGL ++
Sbjct: 134 KRYIHRNLATRNILVENENRVKIGDFGLTKV 164
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGERE-FYNELYFASL 66
+ S + LG G FG V AT + +VAVK++ + ERE +EL S
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 67 LEQDDHVVSVLGFSS--NPKRHRMLLVYELMSNGNLQDALLHKK--------PPELMEWC 116
L ++V++LG + P L++ E G+L + L K+ P +ME
Sbjct: 83 LGNHMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 117 KRF-------SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S + +AKG+A+L S N IH D+ NILL H KI DFGLAR
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 193
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 77
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 78 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 128
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 129 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 180
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGERE-FYNELYFASL 66
+ S + LG G FG V AT + +VAVK++ + ERE +EL S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 67 LEQDDHVVSVLGFSS--NPKRHRMLLVYELMSNGNLQDALLHKK--------PPELMEWC 116
L ++V++LG + P L++ E G+L + L K+ P +ME
Sbjct: 106 LGNHMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 117 KRF-------SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S + +AKG+A+L S N IH D+ NILL H KI DFGLAR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGERE-FYNELYFASL 66
+ S + LG G FG V AT + +VAVK++ + ERE +EL S
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 67 LEQDDHVVSVLGFSS--NPKRHRMLLVYELMSNGNLQDALLHKK--------PPELMEWC 116
L ++V++LG + P L++ E G+L + L K+ P +ME
Sbjct: 101 LGNHMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 117 KRF-------SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S + +AKG+A+L S N IH D+ NILL H KI DFGLAR
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 211
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 36 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 91
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 92 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 144
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA KS
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 175
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 26/173 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK-------KPPEL------M 113
+ +VV++LG + P M++V E GNL L K KP +L +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
E +S V AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 148 EHLIXYSFQV--AKGMEFLASRK--XIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 23 LGQGGFGSVF--HATLHDQSVAVKVMDSGSLQG-------EREFYNELYFASLLEQDDHV 73
LG G FG V L VAVK+++ ++ +RE N F + H+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-----RHPHI 73
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + S P +V E +S G L D + E ME + F I + Y H
Sbjct: 74 IKLYQVISTPTD--FFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCH 128
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAELES 190
V+H D+KP N+LLD + AKI+DFGL+ + S GE + G A E+ S
Sbjct: 129 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVIS 183
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++L G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 82
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG L+ +LM G L D + K L+ WC V I
Sbjct: 83 NPHVCRLLGICLTSTVQ---LITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 133
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 185
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 82/177 (46%), Gaps = 31/177 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGERE-FYNELYFASL 66
+ S + LG G FG V AT + +VAVK++ + ERE +EL S
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 67 LEQDDHVVSVLGFSS--NPKRHRMLLVYELMSNGNLQDALLHKK--------PPELMEWC 116
L ++V++LG + P L++ E G+L + L K+ P +ME
Sbjct: 106 LGNHMNIVNLLGACTIGGPT----LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 117 KRF-------SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S + +AKG+A+L S N IH D+ NILL H KI DFGLAR
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKN--CIHRDLAARNILLTHGRITKICDFGLAR 216
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++L G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFGLA+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG 178
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 82
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 83 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 133
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 134 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 185
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSVAVKV-------MDSGSLQGEREFYNELYFASLLEQ 69
F ++LG G FG+V+ + VK+ ++ S + +E +E Y + ++
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD- 75
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDI 125
+ HV +LG + L+ +LM G L D + K L+ WC V I
Sbjct: 76 NPHVCRLLGICLTST---VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC------VQI 126
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
AKG+ YL ++H D+ N+L+ KI+DFG A+L E + A+G
Sbjct: 127 AKGMNYLEDRR--LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG 178
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 22 LLGQGGFGSVFHATLHDQSVAVKVM----DSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
++G GGFG V+ A VAVK D Q E ++L+ + ++++
Sbjct: 14 IIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPN-IIALR 72
Query: 78 GFSSNPKRHRMLLVYELMSNGNLQDALLHKK-PPE-LMEWCKRFSIAVDIAKGIAYLH-S 134
G K + LV E G L L K+ PP+ L+ W AV IA+G+ YLH
Sbjct: 73 GVCL--KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDE 124
Query: 135 LNPPVIHGDIKPSNILLDH--------NFCAKISDFGLAR 166
P+IH D+K SNIL+ N KI+DFGLAR
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 425 TSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
T+ S G ++APE S+ DV+SYGVLL L+ G P +
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 16 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 71
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 72 YSTKPQ----LAIVTQWCEGSSLYHHLHIIETKF-EMIKLIDIARQTAQGMDYLHA--KS 124
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA KS
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKS 155
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 23 LGQGGFGSV---FHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
LG+G FGSV + L D + VAVK + + + R+F E+ L Q D++V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-QHDNIVKY 79
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
G + R + L+ E + G+L+D L + E ++ K I KG+ YL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTSQICKGMEYLGT-- 135
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
IH D+ NIL+++ KI DFGL ++
Sbjct: 136 KRYIHRDLATRNILVENENRVKIGDFGLTKV 166
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 76/151 (50%), Gaps = 15/151 (9%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHV--VSVLG 78
+G G FG+V+ H VAVK+++ + + Q + F NE+ +L + HV + +G
Sbjct: 32 IGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEV---GVLRKTRHVNILLFMG 87
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+S+ P+ L + G+ LH + E K IA A+G+ YLH+
Sbjct: 88 YSTAPQ----LAIVTQWCEGSSLYHHLHASETKF-EMKKLIDIARQTARGMDYLHA--KS 140
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L + KI DFGLA KS
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 20 SRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGER--EFYNELYFASLLEQDDHVVSVL 77
S +G G FG+V+ H VAVK++ E+ F NE+ ++L + HV ++L
Sbjct: 41 STRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEV---AVLRKTRHV-NIL 95
Query: 78 GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
F + + +V + +L L H + + + + IA A+G+ YLH+ N
Sbjct: 96 LFMGYMTKDNLAIVTQWCEGSSLYKHL-HVQETKF-QMFQLIDIARQTAQGMDYLHAKN- 152
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+IH D+K +NI L KI DFGLA +KS
Sbjct: 153 -IIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 432 GTVCYVAPEYGAGGD---ISEKCDVYSYGVLLLVLIAGRRP 469
G+V ++APE D S + DVYSYG++L L+ G P
Sbjct: 196 GSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR------ 118
++ + +++++LG + + + ++ E S GNL++ L ++PP L E+C
Sbjct: 73 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL-EYCYNPSHNPE 129
Query: 119 --------FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 183
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 75/177 (42%), Gaps = 28/177 (15%)
Query: 12 RAADSFSPSRLLGQGGFGSVF---HATLHDQSVAVKVMDSGSLQGER------------- 55
+ +S+ R LG G +G V H + A+KV+ R
Sbjct: 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEK-AIKVIKKSQFDKGRYSDDNKNIEKFHE 91
Query: 56 EFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEW 115
E YNE+ SLL+ DH + F + LV E G L + ++++ +
Sbjct: 92 EIYNEI---SLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDE 145
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHN---FCAKISDFGLARLKS 169
C +I I GI YLH N ++H DIKP NILL++ KI DFGL+ S
Sbjct: 146 CDAANIMKQILSGICYLHKHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFS 200
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE +EKCDV+S GV++ +L+ G P
Sbjct: 210 GTAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVM-DSGSLQGEREFYNELYFA 64
D + + LG+G FG V A +VAVK++ D + + + +E+
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + +++ Y S GNL++ L ++PP E
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYA--SKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
M + S +A+G+ YL S IH D+ N+L+ N KI+DFGLAR
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQK--CIHRDLAARNVLVTENNVMKIADFGLAR 205
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK-------KPPE-----LME 114
+ +VV++LG + P M++V E GNL L K K PE +
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 115 WCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 147 LEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 29/176 (16%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR------ 118
++ + +++++LG + + + ++ E S GNL++ L ++PP L E+C
Sbjct: 88 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGL-EYCYNPSHNPE 144
Query: 119 --------FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 22 LLGQGGFGSVFHATLHDQSV----AVKVM-DSGSLQGEREFYNELYFASLLEQDDHVVSV 76
++G+G FG V A + + A+K M + S R+F EL L +++++
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINL 88
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA-------------- 122
LG + R + L E +GNL D L + ++E F+IA
Sbjct: 89 LGACEH--RGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQQLLH 143
Query: 123 --VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSV 170
D+A+G+ YL IH ++ NIL+ N+ AKI+DFGL+R + V
Sbjct: 144 FAADVARGMDYLSQ--KQFIHRNLAARNILVGENYVAKIADFGLSRGQEV 191
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 17/155 (10%)
Query: 21 RLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDH-- 72
+++G G FG V L + VA+K + SG + +R +F +E AS++ Q DH
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSE---ASIMGQFDHPN 69
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V+ + G + K ++++ E M NG+L D+ L + + + + IA G+ YL
Sbjct: 70 VIHLEGVVT--KSTPVMIITEFMENGSL-DSFLRQNDGQFTV-IQLVGMLRGIAAGMKYL 125
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+N +H + NIL++ N K+SDFGL+R
Sbjct: 126 ADMN--YVHRALAARNILVNSNLVCKVSDFGLSRF 158
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYF 63
+++V +R F L+G GGFG VF A + ++ +K + + + ERE
Sbjct: 2 AHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE------- 54
Query: 64 ASLLEQDDHVVSVL------GFSSNP----------KRHRMLLVYELMSNGNLQDALLHK 107
L + DHV V GF +P K + + E G L+ + K
Sbjct: 55 VKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLE-QWIEK 113
Query: 108 KPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+ E ++ + I KG+ Y+HS +I+ D+KPSNI L KI DFGL
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHS--KKLINRDLKPSNIFLVDTKQVKIGDFGLV 169
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A +++G G FG V L + VA+K + +G +R +F +E AS++
Sbjct: 28 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE---ASIM 84
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K ++++ E M NG+L DA L K + + I
Sbjct: 85 GQFDHPNIIHLEGVVTKCKP--VMIITEYMENGSL-DAFLRKNDGRFTV-IQLVGMLRGI 140
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
G+ YL ++ +H D+ NIL++ N K+SDFG++R+
Sbjct: 141 GSGMKYLSDMS--AVHRDLAARNILVNSNLVCKVSDFGMSRV 180
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A +++G G FG V L + VA+K + +G +R +F +E AS++
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE---ASIM 63
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K ++++ E M NG+L DA L K + + I
Sbjct: 64 GQFDHPNIIHLEGVVTKCKP--VMIITEYMENGSL-DAFLRKNDGRFTV-IQLVGMLRGI 119
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
G+ YL ++ +H D+ NIL++ N K+SDFG++R+
Sbjct: 120 GSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRV 159
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 21 RLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDHVV 74
+++G G G V + L D VA+K + +G + +R +F +E AS++ Q DH
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE---ASIMGQFDHP- 110
Query: 75 SVLGFSSNPKRHRM-LLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYL 132
+++ R R+ ++V E M NG+L L H +M+ + + G+ YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV---GMLRGVGAGMRYL 167
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
L +H D+ N+L+D N K+SDFGL+R+
Sbjct: 168 SDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 21 RLLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDHVV 74
+++G G G V + L D VA+K + +G + +R +F +E AS++ Q DH
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSE---ASIMGQFDHP- 110
Query: 75 SVLGFSSNPKRHRM-LLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYL 132
+++ R R+ ++V E M NG+L L H +M+ + + G+ YL
Sbjct: 111 NIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV---GMLRGVGAGMRYL 167
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
L +H D+ N+L+D N K+SDFGL+R+
Sbjct: 168 SDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRV 200
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGER-EFYNELYFASLL 67
A +++G G FG V L + VA+K + +G +R +F +E AS++
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSE---ASIM 69
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q DH ++ + G + K ++++ E M NG+L DA L K + + I
Sbjct: 70 GQFDHPNIIHLEGVVTKCKP--VMIITEYMENGSL-DAFLRKNDGRFTV-IQLVGMLRGI 125
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
G+ YL ++ +H D+ NIL++ N K+SDFG++R+
Sbjct: 126 GSGMKYLSDMS--YVHRDLAARNILVNSNLVCKVSDFGMSRV 165
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 19/157 (12%)
Query: 23 LGQGGFGSVFHATLHDQSVAV---KVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
+G+G F +V+ + +V V ++ D + ER+ + E A L+ H V +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEE--AEXLKGLQHPNIVRFY 91
Query: 80 ----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPE---LMEWCKRFSIAVDIAKGIAYL 132
S+ + ++LV EL ++G L+ L K + L WC++ I KG+ +L
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQ------ILKGLQFL 145
Query: 133 HSLNPPVIHGDIKPSNILLDH-NFCAKISDFGLARLK 168
H+ PP+IH D+K NI + KI D GLA LK
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---------PELMEWCK 117
+ +VV++LG + P M++V E GNL L K+ + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 146 LICYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKICDFGLAR 192
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL--------HKKPPE-----LM 113
+ +VV++LG + P M++V E GNL L +K+ PE +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFL 147
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 148 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 198
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---------PELMEWCK 117
+ +VV++LG + P M++V E GNL L K+ + +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 146 LIXYSFQVAKGMEFLASRK--XIHRDLAARNILLSEKNVVKIXDFGLAR 192
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 17 FSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
FS R +G G FG+V+ A + + VA+K M Q ++ + + L++ H
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
++ + H LV E G+ D L +HKKP + +E ++ +G+AYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEY-CLGSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLH 171
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
S N +IH D+K NILL K+ DFG A +
Sbjct: 172 SHN--MIHRDVKAGNILLSEPGLVKLGDFGSASI 203
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
++ + F ++LG+G F +V A + A+K+++ + E + ++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ DH V + + ++ NG L + +K E C RF A +I
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSA 122
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
+ YLH +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 123 LEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 170
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G FG V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 74
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 75 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 129
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFAS-----LLE 68
+ P ++G+G SV +H + AVK+M+ + + E E+ A+ +L
Sbjct: 96 YDPKDVIGRG-VSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 69 Q---DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
Q H+++++ S M LV++LM G L D L K L E R SI +
Sbjct: 155 QVAGHPHIITLI--DSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETR-SIMRSL 209
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+ +++LH+ N ++H D+KP NILLD N ++SDFG +
Sbjct: 210 LEAVSFLHANN--IVHRDLKPENILLDDNMQIRLSDFGFS 247
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
++ + F ++LG+G F +V A + A+K+++ + E + ++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ DH V + + ++ NG L + +K E C RF A +I
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSA 121
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
+ YLH +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 122 LEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 169
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 123
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P M++V E GNL L K+ PE +
Sbjct: 124 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 183 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 233
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P M++V E GNL L K+ PE +
Sbjct: 78 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
++ + F ++LG+G F +V A + A+K+++ + E + ++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ DH V + + ++ NG L + +K E C RF A +I
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSA 119
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
+ YLH +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 120 LEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 167
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 17 FSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
FS R +G G FG+V+ A + + VA+K M Q ++ + + L++ H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
++ + H LV E G+ D L +HKKP + +E ++ +G+AYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIA---AVTHGALQGLAYLH 132
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
S N +IH D+K NILL K+ DFG A +
Sbjct: 133 SHN--MIHRDVKAGNILLSEPGLVKLGDFGSASI 164
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
++ + F ++LG+G F +V A + A+K+++ + E + ++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ DH V + + ++ NG L + +K E C RF A +I
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSA 120
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
+ YLH +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 121 LEYLHGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 168
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P M++V E GNL L K+ PE +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 23 LGQGGFGSVF--HATLHDQSVAVKVMDSGSLQG-------EREFYNELYFASLLEQDDHV 73
LG G FG V L VAVK+++ ++ RE N F + H+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-----RHPHI 78
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + S P + +V E +S G L D + + E + F I G+ Y H
Sbjct: 79 IKLYQVISTPSD--IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ---QILSGVDYCH 133
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAELES 190
V+H D+KP N+LLD + AKI+DFGL+ + S GE + G A E+ S
Sbjct: 134 --RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS 188
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 14/186 (7%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQG---EREFYNELY 62
++ +R + LG+G FG V AT + Q VA+K + L+ E+
Sbjct: 2 AISKRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREIS 61
Query: 63 FASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA 122
+ LL H++ + + P M++ Y + G L D ++ KK E + F
Sbjct: 62 YLKLLRHP-HIIKLYDVITTPTDIVMVIEY---AGGELFDYIVEKKRMTEDEGRRFFQ-- 115
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENK 182
I I Y H ++H D+KP N+LLD N KI+DFGL+ + + G + G
Sbjct: 116 -QIICAIEYCH--RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN 172
Query: 183 NKAAEL 188
A E+
Sbjct: 173 YAAPEV 178
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P M++V E GNL L K+ PE +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 76/190 (40%), Gaps = 41/190 (21%)
Query: 7 YSVLRRAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFA 64
Y+V +R F L+G GGFG VF A + ++ ++ + + + ERE
Sbjct: 4 YTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE-------V 56
Query: 65 SLLEQDDHVVSVL------GFSSNP-----------------------KRHRMLLVYELM 95
L + DHV V GF +P K + + E
Sbjct: 57 KALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFC 116
Query: 96 SNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNF 155
G L+ + K+ E ++ + I KG+ Y+HS +IH D+KPSNI L
Sbjct: 117 DKGTLE-QWIEKRRGEKLDKVLALELFEQITKGVDYIHS--KKLIHRDLKPSNIFLVDTK 173
Query: 156 CAKISDFGLA 165
KI DFGL
Sbjct: 174 QVKIGDFGLV 183
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P M++V E GNL L K+ PE +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 31/174 (17%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVK---------------VMDSGSLQGE 54
R A F +LGQG FG V A L + A+K VM SL +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 55 REFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP--PEL 112
Y Y+A+ LE+ + V + ++ K+ + + E NG L D L+H + +
Sbjct: 63 ---YVVRYYAAWLERRNFVKPM---TAVKKKSTLFIQMEYCENGTLYD-LIHSENLNQQR 115
Query: 113 MEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
E+ + F I + ++Y+HS +IH D+KP NI +D + KI DFGLA+
Sbjct: 116 DEYWRLFR---QILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAG-GDISEKCDVYSYGVLLLVLI 464
G + S GT YVA E G G +EK D+YS G++ +I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 25/178 (14%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGE--REFYNELYFASLLEQ 69
F+ R+LG+G FGSV A L + VAVK++ + + EF E A+ +++
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE---AACMKE 81
Query: 70 DDH--VVSVLGFSSNPK-RHRM---LLVYELMSNGNLQDALLHKK----PPEL-MEWCKR 118
DH V ++G S + + R+ +++ M +G+L LL + P L ++ R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQ 176
F VDIA G+ YL S N IH D+ N +L + ++DFGL+R G+ Q
Sbjct: 142 F--MVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQ 195
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 22 LLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDH--V 73
++G G FG V L + VA+K + G + +R EF +E AS++ Q +H +
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE---ASIMGQFEHPNI 77
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + G +N ++++ E M NG L D+ L + + + IA G+ YL
Sbjct: 78 IRLEGVVTN--SMPVMILTEFMENGAL-DSFLRLNDGQFTV-IQLVGMLRGIASGMRYLA 133
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
++ +H D+ NIL++ N K+SDFGL+R
Sbjct: 134 EMS--YVHRDLAARNILVNSNLVCKVSDFGLSRF 165
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 7/167 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 147 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANA 191
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 1 PPHRFSYSVL---RRAADSF---SPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQ 52
PP F + ++ + A +SF S + +LG G FG V T +A K++ + ++
Sbjct: 69 PPAPFDHRIVTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK 128
Query: 53 GEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL 112
+ E NE+ S++ Q DH + + + ++ ++LV E + G L D ++ + L
Sbjct: 129 DKEEVKNEI---SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRII-DESYNL 184
Query: 113 MEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCA--KISDFGLAR 166
E I +GI ++H + ++H D+KP NIL + KI DFGLAR
Sbjct: 185 TE-LDTILFMKQICEGIRHMHQMY--ILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 149
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 150 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 149
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 150 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 193
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFAS 65
S LR A F L+G G +G V+ Q A+KVMD + E E E+
Sbjct: 17 SALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLK 75
Query: 66 LLEQDDHVVSVLG--FSSNP--KRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFS 120
++ + G NP ++ LV E G++ D + + K L E W
Sbjct: 76 KYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA--Y 133
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
I +I +G+++LH VIH DIK N+LL N K+ DFG++
Sbjct: 134 ICREILRGLSHLHQHK--VIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 147 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 151
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 152 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 195
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSWARH 491
GT YV+PE + D+++ G ++ L+AG P + G+ FQ+ + +
Sbjct: 199 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEYDFP 257
Query: 492 LARNGKLIELVDQAVVKSLDREQALLC 518
A K +LV++ +V LD + L C
Sbjct: 258 AAFFPKARDLVEKLLV--LDATKRLGC 282
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 147 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 21 RLLGQGGFGSVFHATLHDQ-------SVAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
+ LG G FG V AT VAVK++ S + E+E +EL S L Q ++
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-------------------- 112
+V++LG ++ +L++ E G+L + L K L
Sbjct: 97 IVNLLGACTHGGP--VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 113 MEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+E + +A+G+A+L S N IH D+ N+LL + AKI DFGLAR
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKN--CIHRDVAARNVLLTNGHVAKIGDFGLAR 206
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 17/154 (11%)
Query: 22 LLGQGGFGSVFHATLH-----DQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDDH--V 73
++G G FG V L + VA+K + G + +R EF +E AS++ Q +H +
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSE---ASIMGQFEHPNI 79
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + G +N ++++ E M NG L D+ L + + + IA G+ YL
Sbjct: 80 IRLEGVVTN--SMPVMILTEFMENGAL-DSFLRLNDGQFTV-IQLVGMLRGIASGMRYLA 135
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
++ +H D+ NIL++ N K+SDFGL+R
Sbjct: 136 EMS--YVHRDLAARNILVNSNLVCKVSDFGLSRF 167
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 87
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 139
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 81
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 136
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD---QSVAVKVMD---SGSLQGEREFYNELYFASLLE 68
+++ P +LG+G SV +H + AVK++D GS E EL A+L E
Sbjct: 4 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE--VQELREATLKE 60
Query: 69 QD------DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA 122
D H + + LV++LM G L D L K E K
Sbjct: 61 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 120
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENK 182
+++ I LH LN ++H D+KP NILLD + K++DFG + GE + G
Sbjct: 121 LEV---ICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 175
Query: 183 NKAAEL 188
A E+
Sbjct: 176 YLAPEI 181
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 74
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 75 VCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 129
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 77 VCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 78
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 130
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 159
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 71
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 123
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 152
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 77
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 78 VCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 132
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 87
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 139
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 140 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 168
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 77
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 78 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 132
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 133 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 163
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 81
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 82 VCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 136
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 74
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 75 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 129
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 130 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 160
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 77 VCT--REPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 67
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 119
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 148
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 72
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 124
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + R+LG+G FG V + Q AVKV+ ++ + + + L LL+Q D
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H + + + LV E+ + G L D ++ +K ++ + I + GI Y
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 165
Query: 132 LHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLA 165
+H ++H D+KP N+LL+ + +I DFGL+
Sbjct: 166 MH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 214 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P ++++ E GNL L K+ PE +
Sbjct: 78 IGHHLNVVNLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 81
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 136
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + R+LG+G FG V + Q AVKV+ ++ + + + L LL+Q D
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H + + + LV E+ + G L D ++ +K ++ + I + GI Y
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 164
Query: 132 LHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLA 165
+H ++H D+KP N+LL+ + +I DFGL+
Sbjct: 165 MH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 213 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 81/186 (43%), Gaps = 20/186 (10%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD---QSVAVKVMD---SGSLQGEREFYNELYFASLLE 68
+++ P +LG+G SV +H + AVK++D GS E EL A+L E
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE--VQELREATLKE 73
Query: 69 QD------DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA 122
D H + + LV++LM G L D L K E K
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENK 182
+++ I LH LN ++H D+KP NILLD + K++DFG + GE + G
Sbjct: 134 LEV---ICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPS 188
Query: 183 NKAAEL 188
A E+
Sbjct: 189 YLAPEI 194
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
LG G FG V + Q VA+K++ GS+ E EF E A ++ H V +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEE---AKVMMNLSHEKLVQLYGV 72
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
K+ + ++ E M+NG L + L + +L+E CK D+ + + YL S
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCK------DVCEAMEYLES--K 124
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N L++ K+SDFGL+R
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLSR 153
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P ++++ E GNL L K+ PE +
Sbjct: 78 IGHHLNVVNLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 22/163 (13%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + R+LG+G FG V + Q AVKV+ ++ + + + L LL+Q D
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS------IAVDI 125
H + + + LV E+ + G L D ++ +K RFS I +
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK---------RFSEVDAARIIRQV 141
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLA 165
GI Y+H ++H D+KP N+LL+ + +I DFGL+
Sbjct: 142 LSGITYMH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 196 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPF 233
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 81
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 136
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 78
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 133
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 24/173 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-------TLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
D + LG+G FG V A T ++VAVK++ G+ E R +EL
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 77
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------PPE-----LM 113
+ +VV++LG + P ++++ E GNL L K+ PE +
Sbjct: 78 IGHHLNVVNLLGACTKPG-GPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 136
Query: 114 EWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 137 TLEHLICYSFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 80
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 81 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 135
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 166
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 81
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 82 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 136
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 137 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 167
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
A+ ++ +LG+G FG V + Q AVKV++ S + ++ L LL++ D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS------IAVDI 125
H + F +V EL + G L D ++ +K RFS I +
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---------RFSEHDAARIIKQV 130
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLA 165
GI Y+H N ++H D+KP NILL + + KI DFGL+
Sbjct: 131 FSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + G++ E +F E A ++ + H V +
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEE---AEVMMKLSHPKLVQLYGV 73
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV+E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 74 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EACVIH 129
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMTRF 155
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 130
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 131 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 174
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
A+ ++ +LG+G FG V + Q AVKV++ S + ++ L LL++ D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS------IAVDI 125
H + F +V EL + G L D ++ +K RFS I +
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---------RFSEHDAARIIKQV 130
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLA 165
GI Y+H N ++H D+KP NILL + + KI DFGL+
Sbjct: 131 FSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 78
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 133
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + GS+ E +F E A ++ + H V +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSM-SEDDFIEE---AEVMMKLSHPKLVQLYGV 90
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV+E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 91 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EACVIH 146
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 147 RDLAARNCLVGENQVIKVSDFGMTRF 172
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 76
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 77 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 131
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 162
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 148
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 149 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 192
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRANLMSW 488
S GT YV+PE S+ D+++ G ++ L+AG P + G+ FQ+ + +
Sbjct: 193 SFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR-AGNEYLIFQKIIKLEY 251
Query: 489 ARHLARNGKLIELVDQAVVKSLDREQALLC 518
K +LV++ +V LD + L C
Sbjct: 252 DFPEKFFPKARDLVEKLLV--LDATKRLGC 279
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + G++ E +F E A ++ + H V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEE---AEVMMKLSHPKLVQLYGV 70
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV+E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EASVIH 126
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 89
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ +A I+ + YL N
Sbjct: 90 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN-- 144
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 145 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 175
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + G++ E +F E A ++ + H V +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEE---AEVMMKLSHPKLVQLYGV 70
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV+E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 71 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EACVIH 126
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMTRF 152
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + R+LG+G FG V + Q AVKV+ ++ + + + L LL+Q D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H + + + LV E+ + G L D ++ +K ++ + I + GI Y
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 141
Query: 132 LHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLA 165
+H ++H D+KP N+LL+ + +I DFGL+
Sbjct: 142 MH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 190 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 78
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 79 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 133
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 134 FIHRDLAARNCLVGENHLVKVADFGLSRLMT 164
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
A+ ++ +LG+G FG V + Q AVKV++ S + ++ L LL++ D
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD 79
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFS------IAVDI 125
H + F +V EL + G L D ++ +K RFS I +
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK---------RFSEHDAARIIKQV 130
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLA 165
GI Y+H N ++H D+KP NILL + + KI DFGL+
Sbjct: 131 FSGITYMHKHN--IVHRDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 185 GTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 145
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 146 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + ++ NG L + +K E C RF A +I + YL
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 153
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 154 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 197
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 39/192 (20%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R +G+G FG VF A VAVK++ + S + +F E A+L+ + D+
Sbjct: 53 RDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQRE---AALMAEFDN 109
Query: 73 --VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP--------------------- 109
+V +LG + K M L++E M+ G+L + L P
Sbjct: 110 PNIVKLLGVCAVGKP--MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 110 PELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
P + ++ IA +A G+AYL +H D+ N L+ N KI+DFGL+R
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERK--FVHRDLATRNCLVGENMVVKIADFGLSR-NI 224
Query: 170 VGENQNQADGEN 181
+ +ADG +
Sbjct: 225 YSADYYKADGND 236
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + G++ E +F E A ++ + H V +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEE---AEVMMKLSHPKLVQLYGV 68
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV+E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 69 CLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EACVIH 124
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMTRF 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F +V A + A+K+++ + E + ++ + DH
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 145
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 146 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 189
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 20/171 (11%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVK--------VMDSGSLQGEREFYNELYFA 64
D + L+G G +G V A L + VA+K ++D + E N L
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL--- 109
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
DHVV VL + +Y ++ + L + P L E + ++ +
Sbjct: 110 ----NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK-TLLYN 164
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQN 175
+ G+ Y+HS ++H D+KP+N L++ + K+ DFGLAR EN N
Sbjct: 165 LLVGVKYVHSAG--ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGN 213
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 80 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 137
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 138 QLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 190
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 27/167 (16%)
Query: 23 LGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH 72
LG+G FG V A VAVK++ S + + + + +E+ ++ + +
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------ELMEWCKRF 119
++++LG + + + ++ E S GNL++ L ++PP E +
Sbjct: 85 IINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 143 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 187
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 88 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 145
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 80/186 (43%), Gaps = 20/186 (10%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD---QSVAVKVMD---SGSLQGEREFYNELYFASLLE 68
+++ P +LG+G SV +H + AVK++D GS E EL A+L E
Sbjct: 17 ENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEE--VQELREATLKE 73
Query: 69 QD------DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA 122
D H + + LV++LM G L D L K E K
Sbjct: 74 VDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENK 182
+++ I LH LN ++H D+KP NILLD + K++DFG + GE G
Sbjct: 134 LEV---ICALHKLN--IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS 188
Query: 183 NKAAEL 188
A E+
Sbjct: 189 YLAPEI 194
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
A S +L+ Q GF + + G ++ + Y E+ ++L++ DH
Sbjct: 42 AMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIE---QVYQEI---AILKKLDH 95
Query: 73 --VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
VV ++ +P + +V+EL++ G + + K L E RF D+ KGI
Sbjct: 96 PNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSEDQARFYFQ-DLIKGIE 151
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
YLH +IH DIKPSN+L+ + KI+DFG++
Sbjct: 152 YLHYQK--IIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 81 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 138
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 139 QLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 191
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 27/167 (16%)
Query: 23 LGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH 72
LG+G FG V A VAVK++ S + + + + +E+ ++ + +
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------ELMEWCKRF 119
++++LG + + + ++ E S GNL++ L ++PP E +
Sbjct: 96 IINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 154 SCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 18/173 (10%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLHD-QSVAVK-VMDSGSLQGEREFYNELYFAS 65
SV+ SF P +LG G G++ + + D + VAVK ++ +RE
Sbjct: 17 SVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREV------QL 70
Query: 66 LLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
L E D+H + F + R + EL + LQ+ + K L + ++
Sbjct: 71 LRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHL--GLEPITLLQQT 127
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDH-----NFCAKISDFGLARLKSVGEN 173
G+A+LHSLN ++H D+KP NIL+ A ISDFGL + +VG +
Sbjct: 128 TSGLAHLHSLN--IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 24/162 (14%)
Query: 15 DSFSPSRLLGQGGFGSVFHA-TLHD-QSVAVKVMDSGSL---------QGEREFYNELYF 63
+ F LLG+G F V+ A ++H VA+K++D ++ Q E + + +L
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+LE ++ + + LV E+ NG + L ++ P + F
Sbjct: 71 PSILEL---------YNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHF--MH 119
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
I G+ YLHS ++H D+ SN+LL N KI+DFGLA
Sbjct: 120 QIITGMLYLHS--HGILHRDLTLSNLLLTRNMNIKIADFGLA 159
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 7/166 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F ++LG+G F + A + A+K+++ + E + ++ + DH
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V + + ++ NG L + +K E C RF A +I + YL
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTA-EIVSALEYL 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H +IH D+KP NILL+ + +I+DFG A++ S Q +A+
Sbjct: 147 HGKG--IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARAN 190
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 129 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 187 QLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 239
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S L +
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN- 95
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 96 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 29/159 (18%)
Query: 24 GQGGFGSVFHATLHDQSVAVKVM---DSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G FG V+ A L + VAVK+ D S Q ERE ++ ++ ++ +L F
Sbjct: 24 ARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFS----TPGMKHEN----LLQFI 75
Query: 81 SNPKRHRML-----LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS- 134
+ KR L L+ G+L D L ++ W + +A +++G++YLH
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYL----KGNIITWNELCHVAETMSRGLSYLHED 131
Query: 135 --------LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
P + H D K N+LL + A ++DFGLA
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 81/175 (46%), Gaps = 27/175 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL---------HDQSVAVKVMDSGSLQGE-REFYNELYFA 64
D + LG+G FG V A VAVK++ S + + + + +E+
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 65 SLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------E 111
++ + +++++LG + + + ++ E S GNL++ L ++PP E
Sbjct: 88 KMIGKHKNIINLLGACT--QDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEE 145
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A +A+G+ YL S IH D+ N+L+ + KI+DFGLAR
Sbjct: 146 QLSSKDLVSCAYQVARGMEYLASKK--CIHRDLAARNVLVTEDNVMKIADFGLAR 198
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 16 SFSPSRLLGQGGFGSVF-----HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
F ++LGQG FG VF + Q A+KV+ +L+ ++ L+E +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ L ++ + ++ L+ + + G+L L K E +F +A ++A +
Sbjct: 85 HPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALD 140
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+LHSL +I+ D+KP NILLD K++DFGL++
Sbjct: 141 HLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK 174
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
S GTV Y+APE ++ D +S+GVL+ ++ G P Q
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S L +
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQN- 109
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 110 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 16 SFSPSRLLGQGGFGSVF-----HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
F ++LGQG FG VF + Q A+KV+ +L+ ++ L+E +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ L ++ + ++ L+ + + G+L L K E +F +A ++A +
Sbjct: 86 HPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALD 141
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+LHSL +I+ D+KP NILLD K++DFGL++
Sbjct: 142 HLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK 175
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
S GTV Y+APE ++ D +S+GVL+ ++ G P Q
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 283
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 284 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY-MATQISSAMEYLEKKN-- 338
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH ++ N L+ N K++DFGL+RL +
Sbjct: 339 FIHRNLAARNCLVGENHLVKVADFGLSRLMT 369
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 11/156 (7%)
Query: 16 SFSPSRLLGQGGFGSVF-----HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
F ++LGQG FG VF + Q A+KV+ +L+ ++ L+E +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ L ++ + ++ L+ + + G+L L K E +F +A ++A +
Sbjct: 85 HPFIVKLHYAFQTEG-KLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALALD 140
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+LHSL +I+ D+KP NILLD K++DFGL++
Sbjct: 141 HLHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK 174
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
S GTV Y+APE ++ D +S+GVL+ ++ G P Q
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 10/157 (6%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + R+LG+G FG V + Q AVKV+ ++ + + + L LL+Q D
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H + + LV E+ + G L D ++ +K ++ + I + GI Y
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR---IIRQVLSGITY 141
Query: 132 LHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLA 165
H ++H D+KP N+LL+ + +I DFGL+
Sbjct: 142 XH--KNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE G EKCDV+S GV+L +L++G P
Sbjct: 190 GTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 31/174 (17%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVK---------------VMDSGSLQGE 54
R A F +LGQG FG V A L + A+K VM SL +
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 55 REFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP--PEL 112
Y Y+A+ LE+ + V + ++ K+ + + E N L D L+H + +
Sbjct: 63 ---YVVRYYAAWLERRNFVKPM---TAVKKKSTLFIQMEYCENRTLYD-LIHSENLNQQR 115
Query: 113 MEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
E+ + F I + ++Y+HS +IH D+KP NI +D + KI DFGLA+
Sbjct: 116 DEYWRLFR---QILEALSYIHS--QGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAG-GDISEKCDVYSYGVLLLVLI 464
G + S GT YVA E G G +EK D+YS G++ +I
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 36/176 (20%)
Query: 21 RLLGQGGFGSVFHATLHDQS-------VAVKVMDSGSLQGERE-FYNELYFASLLEQDDH 72
++LG G FG V +AT + S VAVK++ + ERE +EL + L ++
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 73 VVSVLGFS--SNPKRHRMLLVYELMSNGNLQDALLHKKPP-------------------- 110
+V++LG S P + L++E G+L + L K+
Sbjct: 111 IVNLLGACTLSGP----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 111 ELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
++ + A +AKG+ +L +H D+ N+L+ H KI DFGLAR
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF--KSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 23 LGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSS 81
+G G FG V L+ VA+K + G++ E +F E A ++ + H V +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEE---AEVMMKLSHPKLVQLYGV 71
Query: 82 NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIH 141
++ + LV E M +G L D L ++ E + +D+ +G+AYL VIH
Sbjct: 72 CLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAE--TLLGMCLDVCEGMAYLE--EACVIH 127
Query: 142 GDIKPSNILLDHNFCAKISDFGLARL 167
D+ N L+ N K+SDFG+ R
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMTRF 153
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 280
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 281 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 335
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH ++ N L+ N K++DFGL+RL +
Sbjct: 336 FIHRNLAARNCLVGENHLVKVADFGLSRLMT 366
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 83
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 84 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 140
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 141 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSG--SLQGEREFYNEL 61
S+ V D + +G G +G V A L Q VA+K + + + + EL
Sbjct: 46 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 105
Query: 62 YFASLLEQDDHV-VSVLGFSSNP--KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ D+ + + + + P + + +V +LM + Q ++H P +E +
Sbjct: 106 KILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQ--IIHSSQPLTLEHVRY 163
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
F + +G+ Y+HS VIH D+KPSN+L++ N KI DFG+AR
Sbjct: 164 F--LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMAR 207
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 109
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 110 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 166
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 167 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 90
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 91 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 147
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 148 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 17 FSPSRLLGQGGFGSVF---HATLHDQS--VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
F ++LGQG FG VF T D A+KV+ +L+ ++ L + +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V L ++ + ++ L+ + + G+L L K E +F +A ++A G+ +
Sbjct: 90 PFVVKLHYAFQTEG-KLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLA-ELALGLDH 145
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL +I+ D+KP NILLD K++DFGL++
Sbjct: 146 LHSLG--IIYRDLKPENILLDEEGHIKLTDFGLSK 178
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 23/43 (53%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
S GTV Y+APE S D +SYGVL+ ++ G P Q
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 20 SRLLGQGGFGSVFHATLHDQ-----SVAVKVMDSG-SLQGEREFYNELYFASLLEQDDHV 73
+R+LG+G FG V+ + +VAVK +L + +F +E L+ H+
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP-HI 87
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V ++G + ++ EL G L L K ++ ++ I K +AYL
Sbjct: 88 VKLIGII---EEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S+N +H DI NIL+ C K+ DFGL+R
Sbjct: 143 SIN--CVHRDIAVRNILVASPECVKLGDFGLSR 173
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 43/201 (21%)
Query: 21 RLLGQGGFGSV-FHATLHDQSVAVKVM-----DSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G G+V F + + VAVK M D ++ L E DDH
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME----------IKLLTESDDHP- 69
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPE----LMEWCKRFSIAVDIAKGIA 130
+V+ + + R L + + N NLQD + K + L + S+ IA G+A
Sbjct: 70 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 131 YLHSLNPPVIHGDIKPSNILLD-------------HNFCAKISDFGLARLKSVGE----- 172
+LHSL +IH D+KP NIL+ N ISDFGL + G+
Sbjct: 130 HLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 173 NQNQADGENKNKAAEL--ESN 191
N N G + +A EL ESN
Sbjct: 188 NLNNPSGTSGWRAPELLEESN 208
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 9 VLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASL 66
V R A + +G+G FG V+ + VAVK+ S + ER ++ E +Y +
Sbjct: 23 VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVM 79
Query: 67 LEQDDHVVSVLGF-----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFS 120
L ++ +LGF N ++ LV + +G+L D L + E M
Sbjct: 80 LRHEN----ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IK 130
Query: 121 IAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+A+ A G+A+LH P + H D+K NIL+ N I+D GLA
Sbjct: 131 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 21 RLLGQGGFGSV---FHATLHD---QSVAVKVMDSGS-------LQGEREFYNELYFASLL 67
R LG+G FG V + +D + VAVK + G Q E E LY
Sbjct: 15 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY----- 69
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+H+V G + + LV E + G+L+D L P + + A I +
Sbjct: 70 --HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICE 123
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+AYLH+ + IH + N+LLD++ KI DFGLA+
Sbjct: 124 GMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 91
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 92 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 148
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 149 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 54 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 112
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 113 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 170
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 171 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 88
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 89 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 145
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 146 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASL 66
R + R LG+GGF + T D + A KV+ L + + E+
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L+ + HVV GF + + +V E+ +L + LHK+ + E R+ + I
Sbjct: 83 LD-NPHVVGFHGFFEDDDF--VYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTI- 136
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKA 185
+G+ YLH N VIH D+K N+ L+ + KI DFGLA +++ GE + G A
Sbjct: 137 QGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 186 AELESNCGAAVE 197
E+ G + E
Sbjct: 195 PEVLCKKGHSFE 206
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE S + D++S G +L L+ G+ P + + + + + N S R
Sbjct: 188 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 247
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVG--MLTGKLE 548
H I V A+++ + L P LRPS+ E++ T
Sbjct: 248 H-------INPVASALIRRM---------------LHADPTLRPSVAELLTDEFFTSGYA 285
Query: 549 APKLPAEFSPSPP 561
+LP PP
Sbjct: 286 PMRLPTSCLTVPP 298
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 110
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 111 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 167
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 168 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 72/159 (45%), Gaps = 26/159 (16%)
Query: 21 RLLGQGGFGSV---FHATLHD---QSVAVKVMDSGS-------LQGEREFYNELYFASLL 67
R LG+G FG V + +D + VAVK + G Q E E LY
Sbjct: 14 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLY----- 68
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+H+V G + + LV E + G+L+D L P + + A I +
Sbjct: 69 --HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL----PRHCVGLAQLLLFAQQICE 122
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+AYLH+ + IH + N+LLD++ KI DFGLA+
Sbjct: 123 GMAYLHAQH--YIHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 86
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 87 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 143
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 144 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 21 RLLGQGGFGSV-FHATLHDQSVAVKVM-----DSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G G+V F + + VAVK M D ++ L E DDH
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME----------IKLLTESDDHP- 87
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPE----LMEWCKRFSIAVDIAKGIA 130
+V+ + + R L + + N NLQD + K + L + S+ IA G+A
Sbjct: 88 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 131 YLHSLNPPVIHGDIKPSNILLD-------------HNFCAKISDFGLARLKSVGE----- 172
+LHSL +IH D+KP NIL+ N ISDFGL + G+
Sbjct: 148 HLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 173 NQNQADGENKNKAAEL 188
N N G + +A EL
Sbjct: 206 NLNNPSGTSGWRAPEL 221
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 89
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 90 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 146
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 147 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 322
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + ++ E M+ GNL D L E+ + +A I+ + YL N
Sbjct: 323 VCT--REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY-MATQISSAMEYLEKKN-- 377
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH ++ N L+ N K++DFGL+RL +
Sbjct: 378 FIHRNLAARNCLVGENHLVKVADFGLSRLMT 408
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 20 SRLLGQGGFGSVFHATLHDQ-----SVAVKVMDSG-SLQGEREFYNELYFASLLEQDDHV 73
+R+LG+G FG V+ + +VAVK +L + +F +E L+ H+
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP-HI 71
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V ++G + ++ EL G L L K ++ ++ I K +AYL
Sbjct: 72 VKLIGII---EEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 126
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S+N +H DI NIL+ C K+ DFGL+R
Sbjct: 127 SIN--CVHRDIAVRNILVASPECVKLGDFGLSR 157
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 20 SRLLGQGGFGSVFHATLHDQ-----SVAVKVMDSG-SLQGEREFYNELYFASLLEQDDHV 73
+R+LG+G FG V+ + +VAVK +L + +F +E L+ H+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHP-HI 75
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V ++G + ++ EL G L L K ++ ++ I K +AYL
Sbjct: 76 VKLIGII---EEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 130
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S+N +H DI NIL+ C K+ DFGL+R
Sbjct: 131 SIN--CVHRDIAVRNILVASPECVKLGDFGLSR 161
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 16 SFSPSRLLGQGGFGSV---FHATLHDQSVAVKVMDSGSL-----QGEREFYNELYFASLL 67
++ + LG+G FG V +H T Q VA+K+++ L QG E E+ + LL
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTT-GQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 71
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H++ + + + +++V E N L D ++ + E + F I
Sbjct: 72 RHP-HIIKL--YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIIS 124
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAE 187
+ Y H ++H D+KP N+LLD + KI+DFGL+ + + G + G A E
Sbjct: 125 AVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 182
Query: 188 LES 190
+ S
Sbjct: 183 VIS 185
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 90
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 91 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 147
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 148 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 77 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 135
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 136 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 193
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 194 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 91
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ Y
Sbjct: 92 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKY 148
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 149 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 37 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 95
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 96 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 153
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 154 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 84/196 (42%), Gaps = 41/196 (20%)
Query: 21 RLLGQGGFGSV-FHATLHDQSVAVKVM-----DSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G G+V F + + VAVK M D ++ L E DDH
Sbjct: 39 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME----------IKLLTESDDHP- 87
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPE----LMEWCKRFSIAVDIAKGIA 130
+V+ + + R L + + N NLQD + K + L + S+ IA G+A
Sbjct: 88 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 131 YLHSLNPPVIHGDIKPSNILLD-------------HNFCAKISDFGLARLKSVGE----- 172
+LHSL +IH D+KP NIL+ N ISDFGL + G+
Sbjct: 148 HLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 205
Query: 173 NQNQADGENKNKAAEL 188
N N G + +A EL
Sbjct: 206 NLNNPSGTSGWRAPEL 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASL 66
R + R LG+GGF + T D + A KV+ L + + E+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L+ + HVV GF + + +V E+ +L + LHK+ + E R+ + I
Sbjct: 99 LD-NPHVVGFHGFFED--DDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTI- 152
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKA 185
+G+ YLH N VIH D+K N+ L+ + KI DFGLA +++ GE + G A
Sbjct: 153 QGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 186 AELESNCGAAVE 197
E+ G + E
Sbjct: 211 PEVLCKKGHSFE 222
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE S + D++S G +L L+ G+ P + + + + + N S R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVG--MLTGKLE 548
H I V A+++ + L P LRPS+ E++ T
Sbjct: 264 H-------INPVASALIRRM---------------LHADPTLRPSVAELLTDEFFTSGYA 301
Query: 549 APKLPAEFSPSPP 561
+LP PP
Sbjct: 302 PMRLPTSCLTVPP 314
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 16 SFSPSRLLGQGGFGSV---FHATLHDQSVAVKVMDSGSL-----QGEREFYNELYFASLL 67
++ + LG+G FG V +H T Q VA+K+++ L QG E E+ + LL
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTT-GQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 70
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H++ + + + +++V E N L D ++ + E + F I
Sbjct: 71 RHP-HIIKL--YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIIS 123
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAE 187
+ Y H ++H D+KP N+LLD + KI+DFGL+ + + G + G A E
Sbjct: 124 AVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 181
Query: 188 LES 190
+ S
Sbjct: 182 VIS 184
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 43/201 (21%)
Query: 21 RLLGQGGFGSV-FHATLHDQSVAVKVM-----DSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G G+V F + + VAVK M D ++ L E DDH
Sbjct: 21 KILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALME----------IKLLTESDDHP- 69
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPE----LMEWCKRFSIAVDIAKGIA 130
+V+ + + R L + + N NLQD + K + L + S+ IA G+A
Sbjct: 70 NVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 131 YLHSLNPPVIHGDIKPSNILLD-------------HNFCAKISDFGLARLKSVGE----- 172
+LHSL +IH D+KP NIL+ N ISDFGL + G+
Sbjct: 130 HLHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRX 187
Query: 173 NQNQADGENKNKAAEL--ESN 191
N N G + +A EL ESN
Sbjct: 188 NLNNPSGTSGWRAPELLEESN 208
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 77/171 (45%), Gaps = 26/171 (15%)
Query: 9 VLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASL 66
V R A + +G+G FG V+ + VAVK+ S + ER ++ E +Y +
Sbjct: 36 VQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVM 92
Query: 67 LEQDDHVVSVLGF-----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFS 120
L ++ +LGF N ++ LV + +G+L D L + E M
Sbjct: 93 LRHEN----ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IK 143
Query: 121 IAVDIAKGIAYLH------SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+A+ A G+A+LH P + H D+K NIL+ N I+D GLA
Sbjct: 144 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 16 SFSPSRLLGQGGFGSV---FHATLHDQSVAVKVMDSGSL-----QGEREFYNELYFASLL 67
++ + LG+G FG V +H T Q VA+K+++ L QG E E+ + LL
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTT-GQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 65
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H++ + + + +++V E N L D ++ + E + F I
Sbjct: 66 RHP-HIIKL--YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIIS 118
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAE 187
+ Y H ++H D+KP N+LLD + KI+DFGL+ + + G + G A E
Sbjct: 119 AVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 176
Query: 188 LES 190
+ S
Sbjct: 177 VIS 179
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 215
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 269
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGF 293
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASL 66
R + R LG+GGF + T D + A KV+ L + + E+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L+ + HVV GF + + +V E+ +L + LHK+ + E R+ + I
Sbjct: 99 LD-NPHVVGFHGFFED--DDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTI- 152
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKA 185
+G+ YLH N VIH D+K N+ L+ + KI DFGLA +++ GE + G A
Sbjct: 153 QGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIA 210
Query: 186 AELESNCGAAVE 197
E+ G + E
Sbjct: 211 PEVLCKKGHSFE 222
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE S + D++S G +L L+ G+ P + + + + + N S R
Sbjct: 204 GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPR 263
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVG--MLTGKLE 548
H I V A+++ + L P LRPS+ E++ T
Sbjct: 264 H-------INPVASALIRRM---------------LHADPTLRPSVAELLTDEFFTSGYA 301
Query: 549 APKLPAEFSPSPP 561
+LP PP
Sbjct: 302 PMRLPTSCLTVPP 314
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL---QGEREFYNELYFASL 66
R + R LG+GGF + T D + A KV+ L + + E+
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L+ + HVV GF + + +V E+ +L + LHK+ + E R+ + I
Sbjct: 99 LD-NPHVVGFHGFFED--DDFVYVVLEICRRRSLLE--LHKRRKAVTEPEARYFMRQTI- 152
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKA 185
+G+ YLH N VIH D+K N+ L+ + KI DFGLA +++ GE + G A
Sbjct: 153 QGVQYLH--NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIA 210
Query: 186 AELESNCGAAVE 197
E+ G + E
Sbjct: 211 PEVLCKKGHSFE 222
Score = 35.4 bits (80), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 55/136 (40%), Gaps = 25/136 (18%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMS 487
++ GT Y+APE S + D++S G +L L+ G+ P + + + + + N S
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 488 WARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVG--MLTG 545
RH I V A+++ + L P LRPS+ E++ T
Sbjct: 261 VPRH-------INPVASALIRRM---------------LHADPTLRPSVAELLTDEFFTS 298
Query: 546 KLEAPKLPAEFSPSPP 561
+LP PP
Sbjct: 299 GYAPMRLPTSCLTVPP 314
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 16 SFSPSRLLGQGGFGSV---FHATLHDQSVAVKVMDSGSL-----QGEREFYNELYFASLL 67
++ + LG+G FG V +H T Q VA+K+++ L QG E E+ + LL
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTT-GQKVALKIINKKVLAKSDMQGRIE--REISYLRLL 61
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H++ + + + +++V E N L D ++ + E + F I
Sbjct: 62 RHP-HIIKL--YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIIS 114
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAE 187
+ Y H ++H D+KP N+LLD + KI+DFGL+ + + G + G A E
Sbjct: 115 AVEYCH--RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPE 172
Query: 188 LES 190
+ S
Sbjct: 173 VIS 175
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 53 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 111
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 112 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 169
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 170 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 63 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 121
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 122 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 179
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 180 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSG--SLQGEREFYNEL 61
S+ V D + +G G +G V A L Q VA+K + + + + EL
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLREL 104
Query: 62 YFASLLEQDDHV-VSVLGFSSNP--KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ D+ + + + + P + + +V +LM + Q ++H P +E +
Sbjct: 105 KILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQ--IIHSSQPLTLEHVRY 162
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
F + +G+ Y+HS VIH D+KPSN+L++ N KI DFG+AR
Sbjct: 163 F--LYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMAR 206
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 14/152 (9%)
Query: 21 RLLGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFAS----LLEQDDHVV 74
+++G+G FG V A + V AVKV+ ++ ++E E + S LL+ H
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKE---EKHIMSERNVLLKNVKHPF 100
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
V S ++ V + ++ G L L ++ +E RF A +IA + YLHS
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC--FLEPRARF-YAAEIASALGYLHS 157
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LN +++ D+KP NILLD ++DFGL +
Sbjct: 158 LN--IVYRDLKPENILLDSQGHIVLTDFGLCK 187
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 94
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 95 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 152
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 153 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 43 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 101
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 102 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 159
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 160 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 28 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 86
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 87 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 144
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 145 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 83/161 (51%), Gaps = 13/161 (8%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE-REFYNELYFASL 66
S+ ++ + F LG+G +GSV+ A +H ++ + + ++ + +E E+ S+
Sbjct: 22 SLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAIKQVPVESDLQEIIKEI---SI 77
Query: 67 LEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
++Q D HVV G S K + +V E G++ D ++ + L E + +I
Sbjct: 78 MQQCDSPHVVKYYG--SYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTE-DEIATILQS 133
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
KG+ YLH + IH DIK NILL+ AK++DFG+A
Sbjct: 134 TLKGLEYLHFMRK--IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVM--DSGSLQGEREFYNELYFASLLEQDDH- 72
++LG+G FGSV L + VAVK M D+ S + EF +E A+ ++ H
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSE---AACMKDFSHP 96
Query: 73 -VVSVLGFS---SNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFSIAVDI 125
V+ +LG S+ + +++ M G+L LL+ + P+ + VDI
Sbjct: 97 NVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDI 156
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
A G+ YL + N +H D+ N +L + ++DFGL++ G+ Q
Sbjct: 157 ALGMEYLSNRN--FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 12/161 (7%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGEREF---YNELYFAS 65
R D+F R+LG+G FG V A + + AVKV+ + + + E S
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 66 LLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
L + + P R + V E ++ G+L + H + + + A +I
Sbjct: 79 LARNHPFLTQLFCCFQTPDR--LFFVMEFVNGGDL---MFHIQKSRRFDEARARFYAAEI 133
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +LH + +I+ D+K N+LLDH K++DFG+ +
Sbjct: 134 ISALMFLH--DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK 172
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 23 LGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G +G V+ + +VAVK + +++ E EF E A+++++ H +V +LG
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKE---AAVMKEIKHPNLVQLLG 95
Query: 79 FSS-NPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
+ P + +V E M GNL D L E+ +A I+ + YL N
Sbjct: 96 VCTLEPPFY---IVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYLEKKN- 150
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
IH D+ N L+ N K++DFGL+RL +
Sbjct: 151 -FIHRDLAARNCLVGENHVVKVADFGLSRLMT 181
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 36 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 94
Query: 73 VVSVLGFS--SNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIA 126
+V +G S S P+ ++ ELM+ G+L+ L +P P + +A DIA
Sbjct: 95 IVRCIGVSLQSLPR----FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
G YL + IH DI N LL AKI DFG+AR
Sbjct: 151 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASLLEQDDHVVSVLGF- 79
+G+G FG V+ + VAVK+ S + ER ++ E +Y +L ++ +LGF
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN----ILGFI 69
Query: 80 ----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH- 133
N ++ LV + +G+L D L + E M +A+ A G+A+LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 124
Query: 134 -----SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
P + H D+K NIL+ N I+D GLA
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 11/145 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT + VAVK MD Q +NE+ D+ VV + +S
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDN-VVDM--YS 109
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++YLH N VI
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIATVCLSVLRALSYLH--NQGVI 163
Query: 141 HGDIKPSNILLDHNFCAKISDFGLA 165
H DIK +ILL + K+SDFG
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFC 188
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASLLEQDDHVVSVLGF- 79
+G+G FG V+ + VAVK+ S + ER ++ E +Y +L ++ +LGF
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN----ILGFI 66
Query: 80 ----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH- 133
N ++ LV + +G+L D L + E M +A+ A G+A+LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 121
Query: 134 -----SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
P + H D+K NIL+ N I+D GLA
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 24/163 (14%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN- 109
Query: 73 VVSVLGFS--SNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIA 126
+V +G S S P+ ++ ELM+ G+L+ L +P P + +A DIA
Sbjct: 110 IVRCIGVSLQSLPR----FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
G YL + IH DI N LL AKI DFG+AR
Sbjct: 166 CGCQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASLLEQDDHVVSVLGF- 79
+G+G FG V+ + VAVK+ S + ER ++ E +Y +L ++ +LGF
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN----ILGFI 64
Query: 80 ----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH- 133
N ++ LV + +G+L D L + E M +A+ A G+A+LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 119
Query: 134 -----SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
P + H D+K NIL+ N I+D GLA
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 21 RLLGQGGFGSVFHATL----HDQS---VAVKVM-DSGSLQGEREFYNELYFASLLEQDDH 72
R LG G FG V+ + +D S VAVK + + S Q E +F E S +
Sbjct: 51 RGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQN- 109
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----PELMEWCKRFSIAVDIAKG 128
+V +G S +LL ELM+ G+L+ L +P P + +A DIA G
Sbjct: 110 IVRCIGVSLQSLPRFILL--ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 129 IAYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLAR 166
YL + IH DI N LL AKI DFG+AR
Sbjct: 168 CQYLEENH--FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 26/157 (16%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNE--LYFASLLEQDDHVVSVLGF- 79
+G+G FG V+ + VAVK+ S + ER ++ E +Y +L ++ +LGF
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIFSS---REERSWFREAEIYQTVMLRHEN----ILGFI 63
Query: 80 ----SSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPELMEWCKRFSIAVDIAKGIAYLH- 133
N ++ LV + +G+L D L + E M +A+ A G+A+LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHM 118
Query: 134 -----SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
P + H D+K NIL+ N I+D GLA
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGERE-FYNEL------- 61
R F P + LG+GGFG VF A + D + A+K + + + RE E+
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 62 ------YFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEW 115
YF + LE++ + S+PK + + + +L NL+D + + E E
Sbjct: 62 HPGIVRYFNAWLEKN---TTEKLQPSSPKVY-LYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
I + IA+ + +LHS ++H D+KPSNI + K+ DFGL
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKG--LMHRDLKPSNIFFTMDDVVKVGDFGLV 165
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLI 464
GT Y++PE G S K D++S G++L L+
Sbjct: 192 GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 150
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 151 NVLSLLGICLRSEGSP-LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 207
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 208 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHD-----QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 73
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 74 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 127
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 128 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLARL 167
H DIKP N+LLD KISDFGLA +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATV 153
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 430 MRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKXVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG VF + + VA+K++D + E E + ++L Q D
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSPY 66
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ S K ++ ++ E + G+ D L P ++ + +I +I KG+ YLHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS 122
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IH DIK +N+LL + K++DFG+A
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 138
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 192
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGF 216
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 95
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 149
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGF 173
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG VF + + VA+K++D + E E + ++L Q D
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSPY 66
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ S K ++ ++ E + G+ D L P ++ + +I +I KG+ YLHS
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS 122
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IH DIK +N+LL + K++DFG+A
Sbjct: 123 EKK--IHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLARL 167
H DIKP N+LLD KISDFGLA +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATV 154
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 430 MRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 430 MRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 430 MRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 430 MRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 91
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 148
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 149 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 21 RLLGQGGFGSV---FHATLHD---QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
R LG+G FG V + +D + VAVK + + + R + + +H++
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHII 96
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
G + + LV E + G+L+D L P + + A I +G+AYLH+
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHA 152
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ IH D+ N+LLD++ KI DFGLA+
Sbjct: 153 QH--YIHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 93
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 147
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGF 171
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHD-----QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 73
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 74 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 128 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHA---------------TLHDQSVAVKVMDSGSLQGEREFYN 59
+ F R+LG+GG+G VF L + D+ + ER
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER---- 72
Query: 60 ELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
++LE+ H V + ++ L+ E +S G L L ++ ME F
Sbjct: 73 -----NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF 125
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +I+ + +LH +I+ D+KP NI+L+H K++DFGL +
Sbjct: 126 YLA-EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 91
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 92 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 148
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 149 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 29/167 (17%)
Query: 15 DSFSPSRLLGQGGFGSVFHA---------------TLHDQSVAVKVMDSGSLQGEREFYN 59
+ F R+LG+GG+G VF L + D+ + ER
Sbjct: 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER---- 72
Query: 60 ELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
++LE+ H V + ++ L+ E +S G L L ++ ME F
Sbjct: 73 -----NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACF 125
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A +I+ + +LH +I+ D+KP NI+L+H K++DFGL +
Sbjct: 126 YLA-EISMALGHLHQKG--IIYRDLKPENIMLNHQGHVKLTDFGLCK 169
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 19 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 76
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 77 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 130
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 131 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 162
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG VF + + VA+K++D + E E + ++L Q D
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSPY 81
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ S K ++ ++ E + G+ D L P ++ + +I +I KG+ YLHS
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS 137
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IH DIK +N+LL + K++DFG+A
Sbjct: 138 EKK--IHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 12 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 68
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 69 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY--- 123
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 124 --LLYQMLXGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 92
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 93 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 149
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 150 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 92
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 93 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 149
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 150 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 18 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 75
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 76 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 129
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 130 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 161
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 166 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ ++L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 89
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 90 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 146
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 147 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 71
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 72 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 124
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLA 150
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 164 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDS-----GSLQGEREFYNELYFASL 66
R F +G G FGSVF + S GS+ E+ E+Y ++
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 66
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---V 123
L Q HVV FS+ + ML+ E + G+L DA+ + +M + K + +
Sbjct: 67 LGQHSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLL 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILL 151
+ +G+ Y+HS++ ++H DIKPSNI +
Sbjct: 123 QVGRGLRYIHSMS--LVHMDIKPSNIFI 148
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 21 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 78
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 79 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 132
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 133 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 164
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 16/155 (10%)
Query: 20 SRLLGQGGFGSVFHATLHDQS-----VAVKVMDSGSLQGE-REFYNELYFASLLEQDDH- 72
+ ++G+G FG V+H TL D AVK ++ + GE +F E +++ H
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTE---GIIMKDFSHP 96
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V+S+LG + L+V M +G+L++ + ++ ++ F + V AKG+ +
Sbjct: 97 NVLSLLGICLRSEG-SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQV--AKGMKF 153
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
L S +H D+ N +LD F K++DFGLAR
Sbjct: 154 LAS--KKFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLL 67
++ + F ++LG+G FG VF A +Q A+K + + + + + +L
Sbjct: 13 IKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 72
Query: 68 EQD-DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
+H F + + + V E ++ G+L + H + + + A +I
Sbjct: 73 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 129
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGE 172
G+ +LHS +++ D+K NILLD + KI+DFG+ + +G+
Sbjct: 130 LGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 173
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 423 GVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
G T GT Y+APE G + D +S+GVLL ++ G+ P
Sbjct: 172 GDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDS-----GSLQGEREFYNELYFASL 66
R F +G G FGSVF + S GS+ E+ E+Y ++
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---V 123
L Q HVV FS+ + ML+ E + G+L DA+ + +M + K + +
Sbjct: 65 LGQHSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLL 120
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILL 151
+ +G+ Y+HS++ ++H DIKPSNI +
Sbjct: 121 QVGRGLRYIHSMS--LVHMDIKPSNIFI 146
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDS-----GSLQGEREFYNELYFASL 66
R F +G G FGSVF + S GS+ E+ E+Y ++
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---V 123
L Q HVV FS+ + ML+ E + G+L DA+ + +M + K + +
Sbjct: 65 LGQHSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLL 120
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILL 151
+ +G+ Y+HS++ ++H DIKPSNI +
Sbjct: 121 QVGRGLRYIHSMS--LVHMDIKPSNIFI 146
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG VF + + VA+K++D + E E + ++L Q D
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSPY 86
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ S K ++ ++ E + G+ D L P ++ + +I +I KG+ YLHS
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL----EPGPLDETQIATILREILKGLDYLHS 142
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IH DIK +N+LL + K++DFG+A
Sbjct: 143 EKK--IHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHD-----QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 453
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 454 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 508 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 539
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 84
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 138
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGF 162
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 13 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 70
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 71 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 124
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 125 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 156
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 44 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 101
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 102 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 155
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 156 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 187
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHDQ-----SVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 73
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 74 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYL 127
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ N C K+ DFGL+R
Sbjct: 128 ESKR--FVHRDIAARNVLVSSNDCVKLGDFGLSR 159
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG VF + Q VA+K++D + E E + ++L Q D
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSSY 82
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV---DIAKGIAY 131
+ S K ++ ++ E + G+ D LL P + F IA +I KG+ Y
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFD------EFQIATMLKEILKGLDY 135
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
LHS IH DIK +N+LL K++DFG+A
Sbjct: 136 LHSEKK--IHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 69/144 (47%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G+G G V AT+ + VAVK MD Q +NE+ ++ H V ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVV---IMRDYQHENVVEMYN 88
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E + G L D + H + M + ++ + + + ++ LH+ VI
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR----MNEEQIAAVCLAVLQALSVLHAQG--VI 142
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK +ILL H+ K+SDFG
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGF 166
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 21 RLLGQGGFGSV---FHATLHD---QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
R LG+G FG V + +D + VAVK + + R + + +H++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
G + + LV E + G+L+D L P + + A I +G+AYLHS
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ IH ++ N+LLD++ KI DFGLA+
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDS-----GSLQGEREFYNELYFASL 66
R F +G G FGSVF + S GS+ E+ E+Y ++
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVD-EQNALREVYAHAV 62
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIA---V 123
L Q HVV FS+ + ML+ E + G+L DA+ + +M + K + +
Sbjct: 63 LGQHSHVVRY--FSAWAEDDHMLIQNEYCNGGSLADAI--SENYRIMSYFKEAELKDLLL 118
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILL 151
+ +G+ Y+HS++ ++H DIKPSNI +
Sbjct: 119 QVGRGLRYIHSMS--LVHMDIKPSNIFI 144
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F+ +G+G FG V+ + + VA+K++D + E E + ++L Q D
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQE--ITVLSQCDSPY 78
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
F S K ++ ++ E + G+ D L P +E +I +I KG+ YLHS
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREILKGLDYLHS 134
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IH DIK +N+LL K++DFG+A
Sbjct: 135 ERK--IHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKXVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 73
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 74 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 126
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLA 152
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G +G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 57 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 113
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 114 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 168
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 169 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG V VAVK + + + + F E AS++ Q H +V +LG
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAE---ASVMTQLRHSNLVQLLGVI 255
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
K + +V E M+ G+L D L + L C ++D+ + + YL N +
Sbjct: 256 VEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCEAMEYLEGNN--FV 311
Query: 141 HGDIKPSNILLDHNFCAKISDFGLAR 166
H D+ N+L+ + AK+SDFGL +
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTK 337
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 23 LGQGGFGSV----FHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD--HVVSV 76
LG G FGSV + VA+KV+ G+ + + E + A ++ Q D ++V +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE--EMMREAQIMHQLDNPYIVRL 75
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
+G + ++LV E+ G L L+ K+ E + + ++ G+ YL N
Sbjct: 76 IGVC---QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N+LL + AKISDFGL++
Sbjct: 131 --FVHRDLAARNVLLVNRHYAKISDFGLSK 158
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 8/166 (4%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLL 67
++ + F ++LG+G FG VF A +Q A+K + + + + + +L
Sbjct: 12 IKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVL 71
Query: 68 EQD-DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
+H F + + + V E ++ G+L + H + + + A +I
Sbjct: 72 SLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEII 128
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGE 172
G+ +LHS +++ D+K NILLD + KI+DFG+ + +G+
Sbjct: 129 LGLQFLHS--KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD 172
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 24/49 (48%)
Query: 423 GVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
G T GT Y+APE G + D +S+GVLL ++ G+ P
Sbjct: 171 GDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG V VAVK + + + + F E AS++ Q H +V +LG
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAE---ASVMTQLRHSNLVQLLGVI 83
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
K + +V E M+ G+L D L + L C ++D+ + + YL N +
Sbjct: 84 VEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCEAMEYLEGNN--FV 139
Query: 141 HGDIKPSNILLDHNFCAKISDFGLAR 166
H D+ N+L+ + AK+SDFGL +
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTK 165
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG V VAVK + + + + F E AS++ Q H +V +LG
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAE---ASVMTQLRHSNLVQLLGVI 74
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
K + +V E M+ G+L D L + L C ++D+ + + YL N +
Sbjct: 75 VEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCEAMEYLEGNN--FV 130
Query: 141 HGDIKPSNILLDHNFCAKISDFGLAR 166
H D+ N+L+ + AK+SDFGL +
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTK 156
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 19/169 (11%)
Query: 4 RFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVK-VMDS--GSLQGEREFY 58
R VLR+ + + LG+G +G V+ + + VAVK + D+ S +R F
Sbjct: 2 RVDRHVLRK----YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF- 56
Query: 59 NELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK-PPELMEWCK 117
E+ + L +++V++L + LV++ M LH ++E
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD------LHAVIRANILEPVH 110
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + K I YLHS ++H D+KPSNILL+ K++DFGL+R
Sbjct: 111 KQYVVYQLIKVIKYLHS--GGLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 81
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 82 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 136
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 137 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 195 AVE 197
+ E
Sbjct: 195 SFE 197
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMS 487
++ GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 488 WARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV------- 540
+H+ V SL ++ LQ P RP++ E++
Sbjct: 236 IPKHI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTS 273
Query: 541 GMLTGKLEAPKL--PAEFSPSPPSRIP 565
G + +L L P FS +P S P
Sbjct: 274 GYIPARLPITCLTIPPRFSIAPSSLDP 300
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 57 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 113
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 114 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 168
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 169 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 85
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 86 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 140
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 141 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 195 AVE 197
+ E
Sbjct: 199 SFE 201
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMS 487
++ GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S
Sbjct: 180 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 239
Query: 488 WARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV------- 540
+H+ V SL ++ LQ P RP++ E++
Sbjct: 240 IPKHI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTS 277
Query: 541 GMLTGKLEAPKL--PAEFSPSPPSRIP 565
G + +L L P FS +P S P
Sbjct: 278 GYIPARLPITCLTIPPRFSIAPSSLDP 304
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 20 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 76
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 77 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 131
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 132 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 20 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 76
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 77 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 131
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 132 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 18 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 74
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 75 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 129
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 130 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D + R LG+G + VF A +++ V VK++ + + E+ L +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KNKIKREIKILENLRGGPN 93
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYMY-EILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 15/150 (10%)
Query: 23 LGQGGFGSV----FHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD--HVVSV 76
LG G FGSV + VA+KV+ G+ + + E + A ++ Q D ++V +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE--EMMREAQIMHQLDNPYIVRL 401
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
+G + ++LV E+ G L L+ K+ E + + ++ G+ YL N
Sbjct: 402 IGVC---QAEALMLVMEMAGGGPLHKFLVGKR--EEIPVSNVAELLHQVSMGMKYLEEKN 456
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H ++ N+LL + AKISDFGL++
Sbjct: 457 --FVHRNLAARNVLLVNRHYAKISDFGLSK 484
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 12/152 (7%)
Query: 21 RLLGQGGFGSV---FHATLHD---QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
R LG+G FG V + +D + VAVK + + R + + +H++
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHII 79
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
G + + LV E + G+L+D L P + + A I +G+AYLH+
Sbjct: 80 KYKGCCEDQGEKSLQLVMEYVPLGSLRDYL----PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ IH ++ N+LLD++ KI DFGLA+
Sbjct: 136 QH--YIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG V VAVK + + + + F E AS++ Q H +V +LG
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAE---ASVMTQLRHSNLVQLLGVI 68
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
K + +V E M+ G+L D L + L C ++D+ + + YL N +
Sbjct: 69 VEEKGG-LYIVTEYMAKGSLVDYLRSRGRSVLGGDC-LLKFSLDVCEAMEYLEGNN--FV 124
Query: 141 HGDIKPSNILLDHNFCAKISDFGLAR 166
H D+ N+L+ + AK+SDFGL +
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTK 150
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 13 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 69
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 70 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 124
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 125 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 13 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 69
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 70 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 124
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 125 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 12/177 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQ--GEREFYNELYFASLLEQDD 71
++ + +G+G F V A L + VAVK++D L ++ + E+ +L +
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL---N 72
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H V F + LV E S G + D L+ + E +F I + Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQY 129
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAEL 188
H ++H D+K N+LLD + KI+DFG + +VG + G A EL
Sbjct: 130 CHQ--KYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPEL 184
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 12 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 68
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 69 LMKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 123
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 124 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 81
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 82 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 136
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 137 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 195 AVE 197
+ E
Sbjct: 195 SFE 197
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 32/147 (21%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMS 487
++ GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S
Sbjct: 176 TLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYS 235
Query: 488 WARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV------- 540
+H+ V SL ++ LQ P RP++ E++
Sbjct: 236 IPKHI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTS 273
Query: 541 GMLTGKLEAPKL--PAEFSPSPPSRIP 565
G + +L L P FS +P S P
Sbjct: 274 GYIPARLPITCLTIPPXFSIAPSSLDP 300
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L D++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAVL-DRNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 76 LMKXVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 21/159 (13%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDD--HVVSVLG 78
LG GG G VF A +D + VA+K + Q + E+ L+ D+ V +LG
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 79 FS---------SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
S S + + + +V E M +L + L ++ P L E + F + +G+
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL--EQGPLLEEHARLF--MYQLLRGL 133
Query: 130 AYLHSLNPPVIHGDIKPSNILLD-HNFCAKISDFGLARL 167
Y+HS N V+H D+KP+N+ ++ + KI DFGLAR+
Sbjct: 134 KYIHSAN--VLHRDLKPANLFINTEDLVLKIGDFGLARI 170
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 105
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 106 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 160
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 161 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 218
Query: 195 AVE 197
+ E
Sbjct: 219 SFE 221
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 32/144 (22%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S +
Sbjct: 203 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 262
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV-------GML 543
H+ V SL ++ LQ P RP++ E++ G +
Sbjct: 263 HI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTSGYI 300
Query: 544 TGKLEAPKL--PAEFSPSPPSRIP 565
+L L P FS +P S P
Sbjct: 301 PARLPITCLTIPPRFSIAPSSLDP 324
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + G RE ++ + DH
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHC 73
Query: 74 ----VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+ +SS K+ + LV + + + A + + + + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAA 186
+AY+HS + H DIKP N+LLD + K+ DFG A+ GE +A
Sbjct: 134 SLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 187 EL 188
EL
Sbjct: 192 EL 193
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F R +G+G FG V +D + A+K M+ E N +++ +H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL---LHKKPPELMEWCKRFSIAVDIAKGI 129
V + S M +V +L+ G+L+ L +H K + + +A+D
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD----- 129
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
YL N +IH D+KP NILLD + I+DF +A +
Sbjct: 130 -YLQ--NQRIIHRDMKPDNILLDEHGHVHITDFNIAAM 164
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + G RE ++ + DH
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHC 73
Query: 74 VSV----LGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
V +SS K+ + LV + + + A + + + + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAA 186
+AY+HS + H DIKP N+LLD + K+ DFG A+ GE +A
Sbjct: 134 SLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAP 191
Query: 187 EL 188
EL
Sbjct: 192 EL 193
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 18/182 (9%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + G RE ++ + DH
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNREL-------QIMRKLDHC 73
Query: 74 VSV----LGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
V +SS K+ + LV + + + A + + + + + +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAA 186
+AY+HS + H DIKP N+LLD + K+ DFG A+ GE +A
Sbjct: 134 SLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAP 191
Query: 187 EL 188
EL
Sbjct: 192 EL 193
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 103
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 104 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 158
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 159 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 216
Query: 195 AVE 197
+ E
Sbjct: 217 SFE 219
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 32/144 (22%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S +
Sbjct: 201 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 260
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVV-------GML 543
H+ V SL ++ LQ P RP++ E++ G +
Sbjct: 261 HI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTSGYI 298
Query: 544 TGKLEAPKL--PAEFSPSPPSRIP 565
+L L P FS +P S P
Sbjct: 299 PARLPITCLTIPPRFSIAPSSLDP 322
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 91 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 144
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 145 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 179
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 169 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Query: 467 RRPLQVT 473
+ P +
Sbjct: 229 KPPFEAN 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSL--------------QGEREFYNE 60
++F R+LG+GGFG V A +V +G + +GE NE
Sbjct: 184 NTFRQYRVLGKGGFGEV---------CACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 61 LYFASLLEQ-DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
+LE+ + V L ++ K + LV LM+ G+L+ + H E F
Sbjct: 235 ---KQILEKVNSRFVVSLAYAYETK-DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
A +I G+ LH +++ D+KP NILLD + +ISD GLA
Sbjct: 291 -YAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA 333
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
GTV Y+APE + D ++ G LL +IAG+ P Q
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 16 SFSPSRLLGQGGFGSVFHATL-HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV- 73
+++ +++G G FG VF A L VA+K + LQ +R EL +++ + V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVD 96
Query: 74 VSVLGFSSNPKRHRMLL------VYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+ +S+ K+ + L V E + + A L + P L+ + + +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLL----R 152
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLD-HNFCAKISDFGLARLKSVGE 172
+AY+HS+ + H DIKP N+LLD + K+ DFG A++ GE
Sbjct: 153 SLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 76/158 (48%), Gaps = 9/158 (5%)
Query: 22 LLGQGGFGSVFHATLHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
L+G+G FG V+H H + VA++++D + + + + A + ++VV +G
Sbjct: 40 LIGKGRFGQVYHGRWHGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC 98
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+P + ++ L L + K +++ K IA +I KG+ YLH+ ++
Sbjct: 99 MSPP--HLAIITSLCKGRTLYSVVRDAKI--VLDVNKTRQIAQEIVKGMGYLHAKG--IL 152
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H D+K N+ D N I+DFGL + V + + D
Sbjct: 153 HKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRRED 189
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSL--------------QGEREFYNE 60
++F R+LG+GGFG V A +V +G + +GE NE
Sbjct: 184 NTFRQYRVLGKGGFGEV---------CACQVRATGKMYACKKLEKKRIKKRKGEAMALNE 234
Query: 61 LYFASLLEQ-DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
+LE+ + V L ++ K + LV LM+ G+L+ + H E F
Sbjct: 235 ---KQILEKVNSRFVVSLAYAYETK-DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
A +I G+ LH +++ D+KP NILLD + +ISD GLA
Sbjct: 291 -YAAEICCGLEDLHRER--IVYRDLKPENILLDDHGHIRISDLGLA 333
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
GTV Y+APE + D ++ G LL +IAG+ P Q
Sbjct: 347 GTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 13/161 (8%)
Query: 16 SFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+F + +G+G F V+ A L VA+K + L + + + LL+Q +H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-----PELMEWCKRFSIAVDIAKG 128
+ ++S + + + +V EL G+L + H K PE W K F V +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW-KYF---VQLCSA 148
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+ ++HS V+H DIKP+N+ + K+ D GL R S
Sbjct: 149 LEHMHSRR--VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 24/164 (14%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
L+ A+ + +++G+G FG V H S V M L + E A E+
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAM---KLLSKFEMIKRSDSAFFWEE 125
Query: 70 DDHVVSVLGFSSNP----------KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
D ++ F+++P + +V E M G+L + + + PE +W K +
Sbjct: 126 RD----IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPE--KWAKFY 179
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+ V +A + +HS+ +IH D+KP N+LLD + K++DFG
Sbjct: 180 TAEVVLA--LDAIHSMG--LIHRDVKPDNMLLDKHGHLKLADFG 219
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 11/146 (7%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMD-SGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G G V A + +++VAVK++D ++ E+ +L ++ VV G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-VVKFYGH 72
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ L Y S G L D + +P M + G+ YLH + +
Sbjct: 73 RREGNIQYLFLEY--CSGGELFDRI---EPDIGMPEPDAQRFFHQLMAGVVYLHGIG--I 125
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
H DIKP N+LLD KISDFGLA
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLA 151
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 429 SMRGTVCYVAPEYGAGGDI-SEKCDVYSYGVLLLVLIAGRRP 469
M GT+ YVAPE + +E DV+S G++L ++AG P
Sbjct: 165 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 14/153 (9%)
Query: 21 RLLGQGGFGSVFHATLHDQS-----VAVKVMDSGS-LQGEREFYNELYFASLLEQDDHVV 74
R++G+G FG V+H DQ+ A+K + + +Q F E L + V+
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPN-VL 85
Query: 75 SVLGFSSNPK-RHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+++G P+ +LL Y M +G+L + + P S + +A+G+ YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPY--MCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYLA 141
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+H D+ N +LD +F K++DFGLAR
Sbjct: 142 EQK--FVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVK-VMDSGSLQGEREFYNELYFASLLEQDDHVVSVLG 78
L+G+G +G V D + VA+K ++S + ++ + LL+Q H V
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKI--AMREIKLLKQLRHENLVNL 89
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
K+ R LV+E + + L D L P +++ I GI + HS N
Sbjct: 90 LEVCKKKKRWYLVFEFVDHTILDDLELF---PNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLAR-LKSVGENQNQADGENKNKAAEL 188
+IH DIKP NIL+ + K+ DFG AR L + GE + +A EL
Sbjct: 145 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPEL 195
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 25/171 (14%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVM------------DSGSLQGEREF 57
R A F +LGQG FG V A L + A+K + + L
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQ 62
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP--PELMEW 115
Y Y+A+ LE+ + V ++ K+ + + E N L D L+H + + E+
Sbjct: 63 YVVRYYAAWLERRNFVKPX---TAVKKKSTLFIQXEYCENRTLYD-LIHSENLNQQRDEY 118
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ F I + ++Y+HS +IH ++KP NI +D + KI DFGLA+
Sbjct: 119 WRLFR---QILEALSYIHS--QGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 91 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 144
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 145 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 179
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 169 SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 228
Query: 467 RRPLQVT 473
+ P +
Sbjct: 229 KPPFEAN 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 112
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGE 172
Y+HS + H DIKP N+LLD + K+ DFG A+ GE
Sbjct: 173 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 88
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 149 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 114
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGE 172
Y+HS + H DIKP N+LLD + K+ DFG A+ GE
Sbjct: 175 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 110
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGE 172
Y+HS + H DIKP N+LLD + K+ DFG A+ GE
Sbjct: 171 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHD-----QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 73
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 74 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 127
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ C K+ DFGL+R
Sbjct: 128 ESKR--FVHRDIAARNVLVSATDCVKLGDFGLSR 159
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 80
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 141 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 22 LLGQGGFGSVFHATLHD--QSVAVKVMDSGSL----QGEREFYNELYFASLLEQDDHVVS 75
LG+GGF F + D + A K++ L Q E+ SL Q HVV
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ--HVVG 79
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
GF + + +V EL +L + LHK+ L E R+ + I G YLH
Sbjct: 80 FHGFFED--NDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLR-QIVLGCQYLHRN 134
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA-RLKSVGENQNQADGENKNKAAELESNCGA 194
VIH D+K N+ L+ + KI DFGLA +++ GE + G A E+ S G
Sbjct: 135 R--VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 195 AVE 197
+ E
Sbjct: 193 SFE 195
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 25/133 (18%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ-RANLMSWAR 490
GT Y+APE + S + DV+S G ++ L+ G+ P + + + + + N S +
Sbjct: 177 GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK 236
Query: 491 HLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPSMEEVVG--MLTGKLE 548
H+ V SL ++ LQ P RP++ E++ T
Sbjct: 237 HI-----------NPVAASLIQKM-----------LQTDPTARPTINELLNDEFFTSGYI 274
Query: 549 APKLPAEFSPSPP 561
+LP PP
Sbjct: 275 PARLPITCLTIPP 287
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 104
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGE 172
Y+HS + H DIKP N+LLD + K+ DFG A+ GE
Sbjct: 165 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 95
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 156 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 77
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 138 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 84
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 145 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
LR A+ + +++G+G FG V H + V M L + E A E+
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAM---KLLSKFEMIKRSDSAFFWEE 119
Query: 70 DDHVVSVLGFSSNP----------KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
D ++ F+++P + +V E M G+L + + + PE +W + +
Sbjct: 120 RD----IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFY 173
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+ V +A + +HS+ IH D+KP N+LLD + K++DFG
Sbjct: 174 TAEVVLA--LDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFG 213
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 81
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 82 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 135
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 136 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 170
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 160 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 219
Query: 467 RRPLQVT 473
+ P +
Sbjct: 220 KPPFEAN 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 151
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 152 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 184
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
LR A+ + +++G+G FG V H + V M L + E A E+
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAM---KLLSKFEMIKRSDSAFFWEE 124
Query: 70 DDHVVSVLGFSSNP----------KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
D ++ F+++P + +V E M G+L + + + PE +W + +
Sbjct: 125 RD----IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFY 178
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+ V +A + +HS+ IH D+KP N+LLD + K++DFG
Sbjct: 179 TAEVVLA--LDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 177
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 178 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 155
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGE 172
Y+HS + H DIKP N+LLD + K+ DFG A+ GE
Sbjct: 216 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 81
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 142 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 89
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 150 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 24/164 (14%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
LR A+ + +++G+G FG V H + V M L + E A E+
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAM---KLLSKFEMIKRSDSAFFWEE 124
Query: 70 DDHVVSVLGFSSNP----------KRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
D ++ F+++P + +V E M G+L + + + PE +W + +
Sbjct: 125 RD----IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPE--KWARFY 178
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+ V +A + +HS+ IH D+KP N+LLD + K++DFG
Sbjct: 179 TAEVVLA--LDAIHSMG--FIHRDVKPDNMLLDKSGHLKLADFG 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 22/174 (12%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQ--GEREF 57
PH +Y +L+ +G+G F V A L + VA+K++D L ++
Sbjct: 9 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKL 58
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + L+ E S G + D L+ + E
Sbjct: 59 FREVRIMKIL---NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 115
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
+F I + Y H ++H D+K N+LLD + KI+DFG + +VG
Sbjct: 116 KFR---QIVSAVQYCH--QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 164
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 18/154 (11%)
Query: 21 RLLGQGGFGSVFHATLHD-----QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--V 73
R +G+G FG V +VA+K + + RE + L A + Q DH +
Sbjct: 396 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKF--LQEALTMRQFDHPHI 453
Query: 74 VSVLG-FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V ++G + NP + ++ EL + G L+ L +K ++ A ++ +AYL
Sbjct: 454 VKLIGVITENP----VWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYL 507
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S +H DI N+L+ C K+ DFGL+R
Sbjct: 508 ESKR--FVHRDIAARNVLVSATDCVKLGDFGLSR 539
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + +G G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E M G++ L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D K++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 36/197 (18%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQ--GEREF 57
PH +Y +L+ +G+G F V A L + VA+K++D L ++
Sbjct: 12 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKL 61
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + L+ E S G + D L+ + E
Sbjct: 62 FREVRIMKIL---NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARS 118
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + +VG
Sbjct: 119 KFR---QIVSAVQYCHQ--KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG------ 167
Query: 178 DGENKNKAAELESNCGA 194
+L++ CGA
Sbjct: 168 --------GKLDAFCGA 176
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + +G G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E M G++ L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D K++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 70 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 123
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 124 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVG 207
Query: 467 RRPLQ 471
+ P +
Sbjct: 208 KPPFE 212
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R + L+ E G + L +K + E + + ++A
Sbjct: 70 LRHPN-ILRLYGYFHDATR--VYLILEYAPRGEVYKEL--QKLSKFDEQ-RTATYITELA 123
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 124 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Query: 467 RRPLQ 471
+ P +
Sbjct: 208 KPPFE 212
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 67 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 120
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 121 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 155
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 145 SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
Query: 467 RRPLQ 471
+ P +
Sbjct: 205 KPPFE 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQ 471
+ P +
Sbjct: 206 KPPFE 210
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 70 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 123
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 124 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Query: 467 RRPLQ 471
+ P +
Sbjct: 208 KPPFE 212
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 66 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 119
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 120 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 154
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 144 SAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Query: 467 RRPLQ 471
+ P +
Sbjct: 204 KPPFE 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R + L+ E G + L +K + E + + ++A
Sbjct: 70 LRHPN-ILRLYGYFHDATR--VYLILEYAPRGEVYKEL--QKLSKFDEQ-RTATYITELA 123
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 124 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 148 SAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Query: 467 RRPLQVT 473
+ P +
Sbjct: 208 KPPFEAN 214
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 66 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 119
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 120 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 154
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 144 SAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Query: 467 RRPLQ 471
+ P +
Sbjct: 204 KPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 65
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 66 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 119
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 120 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 154
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 144 SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203
Query: 467 RRPLQ 471
+ P +
Sbjct: 204 KPPFE 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD---- 70
D F R+LG+GGFG VF + K+ L +R + Y +++E+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQM---KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 71 --DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH--KKPPELMEWCKRFSIAVDIA 126
+ L ++ K + LV +M+ G+++ + + + P E F A I
Sbjct: 242 VHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIV 299
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQ 176
G+ +LH N +I+ D+KP N+LLD + +ISD GLA G+ + +
Sbjct: 300 SGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD---- 70
D F R+LG+GGFG VF + K+ L +R + Y +++E+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQM---KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 71 --DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH--KKPPELMEWCKRFSIAVDIA 126
+ L ++ K + LV +M+ G+++ + + + P E F A I
Sbjct: 242 VHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIV 299
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQ 176
G+ +LH N +I+ D+KP N+LLD + +ISD GLA G+ + +
Sbjct: 300 SGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 12/179 (6%)
Query: 16 SFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
S++ ++++G G FG V+ A L D + VA+K + LQ +R EL L+ + V
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIV 76
Query: 74 -VSVLGFSSNPKRHRML--LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+ +SS K+ + LV + + + A + + + + + + +A
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
Y+HS + H DIKP N+LLD + K+ DFG A+ GE +A EL
Sbjct: 137 YIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 9/153 (5%)
Query: 21 RLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLG 78
R+L +GGF V+ A + A+K + S + R E+ F L ++V
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 79 FSSNPKRH------RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
+S K LL+ EL G L + L + + I + + ++
Sbjct: 94 AASIGKEESDTGQAEFLLLTEL-CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
H PP+IH D+K N+LL + K+ DFG A
Sbjct: 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQG---EREFYNELYFASLL 67
A + F R LG+G FG+V+ A + +A+KV+ L+ E + E+ S L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+ ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 66 RHPN-ILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 119
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 120 ALSYCHS--KKVIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD---- 70
D F R+LG+GGFG VF + K+ L +R + Y +++E+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQM---KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 71 --DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH--KKPPELMEWCKRFSIAVDIA 126
+ L ++ K + LV +M+ G+++ + + + P E F A I
Sbjct: 242 VHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIV 299
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQ 176
G+ +LH N +I+ D+KP N+LLD + +ISD GLA G+ + +
Sbjct: 300 SGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 178 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQVT 473
+ P +
Sbjct: 206 KPPFEAN 212
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + +E + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+++D K++DFGLA+
Sbjct: 158 HSLD--LIYRDLKPENLMIDQQGYIKVTDFGLAK 189
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVF----HATLHDQSVAVKVMDSGSLQGEREF 57
P F S ++ + + LG G +G V T ++++ + S S +
Sbjct: 24 PGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKL 83
Query: 58 YNELYFASLLEQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEW 115
E+ LL DH ++ + F + + + LV E G L D ++H+ ++
Sbjct: 84 LEEVAVLKLL---DHPNIMKLYDFFEDKRNY--YLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 116 CKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARLKSVGE 172
I + G+ YLH N ++H D+KP N+LL + + KI DFGL+ +V E
Sbjct: 139 A---VIIKQVLSGVTYLHKHN--IVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFE 190
Query: 173 NQNQ 176
NQ +
Sbjct: 191 NQKK 194
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE EKCDV+S GV+L +L+AG P
Sbjct: 200 GTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSL--QGEREFYNELYFAS 65
+R + F +++G+G FG V L D+ A+K+++ + + E + E
Sbjct: 69 MRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREER-DV 127
Query: 66 LLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
L+ D ++ L ++ + + LV + G+L LL K L E RF +A ++
Sbjct: 128 LVNGDSKWITTLHYAFQDDNN-LYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLA-EM 184
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
I +H L+ +H DIKP NIL+D N +++DFG
Sbjct: 185 VIAIDSVHQLH--YVHRDIKPDNILMDMNGHIRLADFG 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD---- 70
D F R+LG+GGFG VF + K+ L +R + Y +++E+
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQM---KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 71 --DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH--KKPPELMEWCKRFSIAVDIA 126
+ L ++ K + LV +M+ G+++ + + + P E F A I
Sbjct: 242 VHSRFIVSLAYAFETKTD-LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA-QIV 299
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQ 176
G+ +LH N +I+ D+KP N+LLD + +ISD GLA G+ + +
Sbjct: 300 SGLEHLHQRN--IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK 347
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQ 471
+ P +
Sbjct: 206 KPPFE 210
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 63
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 64 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 117
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 118 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 152
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 142 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 201
Query: 467 RRPLQ 471
+ P +
Sbjct: 202 KPPFE 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQG---EREFYNELYFASLL 67
A + F R LG+G FG+V+ A + +A+KV+ L+ E + E+ S L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 68 EQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
+ ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 63 RHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELAN 116
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 117 ALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 150
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 140 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 199
Query: 467 RRPLQ 471
+ P +
Sbjct: 200 KPPFE 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQG---EREFYNELYFASLLEQ 69
+ F R LG+G FG+V+ A +A+KV+ L+ E + E+ S L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++ + G+ + R VY ++ L + + + + ++A +
Sbjct: 72 PN-ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+Y HS VIH DIKP N+LL N KI+DFG
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGSNGELKIADFG 157
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 417 EIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
+I G PS R GT+ Y+ PE G EK D++S GVL + G P +
Sbjct: 152 KIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 36/160 (22%)
Query: 23 LGQGGFGSVFHATLH----------------DQSVAVKVMDSGSLQGEREFYNELYFASL 66
+G+G +G+VF A D+ V + L E + N + +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L D + V F + Y NG+L PE+++ S +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKK-----YFDSCNGDLD--------PEIVK-----SFLFQLL 111
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
KG+ + HS N V+H D+KP N+L++ N K++DFGLAR
Sbjct: 112 KGLGFCHSRN--VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 64
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 65 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 118
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 119 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 153
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 143 SAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 467 RRPLQ 471
+ P +
Sbjct: 203 KPPFE 207
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 70 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 123
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 124 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 158
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 207
Query: 467 RRPLQ 471
+ P +
Sbjct: 208 KPPFE 212
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 68
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 69 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 122
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 123 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 157
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 147 SAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 206
Query: 467 RRPLQ 471
+ P +
Sbjct: 207 KPPFE 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQ 471
+ P +
Sbjct: 206 KPPFE 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI+DFG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIADFG 156
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQ 471
+ P +
Sbjct: 206 KPPFE 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQG---EREFYNELYFASLLEQ 69
+ F R LG+G FG+V+ A +A+KV+ L+ E + E+ S L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++ + G+ + R VY ++ L + + + + ++A +
Sbjct: 72 PN-ILRLYGYFHDATR-----VYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+Y HS VIH DIKP N+LL N KI+DFG
Sbjct: 126 SYCHSKR--VIHRDIKPENLLLGSNGELKIADFG 157
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Query: 417 EIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
+I G PS R GT+ Y+ PE G EK D++S GVL + G P +
Sbjct: 152 KIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAVK++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G +
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGSPPYAAPEL 183
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 143
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 144 LHSLD--LIYRDLKPENLLIDEQGYIQVTDFGFAK 176
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAVK++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G +
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGSPPYAAPEL 183
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 80/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAV+++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G ++
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGSPPYAAPEL 183
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H +S A+K++D + ++ + L +L+ +
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E ++ G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+++D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLIIDQQGYIQVTDFGFAK 189
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+L++ KI DFGLAR+
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLINTTCDLKICDFGLARI 193
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 14/182 (7%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + + LG G +G V L A+K++ S+ L ++L+Q D
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 72 H--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
H ++ + F + + + LV E+ G L D ++ ++ ++ I + G
Sbjct: 80 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQVLSGT 134
Query: 130 AYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLARLKSVGENQNQADGENKNKAA 186
YLH N ++H D+KP N+LL+ + KI DFGL+ VG + G A
Sbjct: 135 TYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAP 192
Query: 187 EL 188
E+
Sbjct: 193 EV 194
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE EKCDV+S GV+L +L+ G P
Sbjct: 185 GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARV 173
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAVK++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G +
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGAPPYAAPEL 183
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE---REFYNE 60
+++VL+R + + +G G G V A T+ +VAVK + S Q + + Y E
Sbjct: 19 TFTVLKR----YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL-SRPFQNQTHAKRAYRE 73
Query: 61 LYFASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWC 116
L + + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 74 LVLLKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY- 130
Query: 117 KRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 ----LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 83/175 (47%), Gaps = 23/175 (13%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE---REFYNE 60
+++VL+R + + +G G G V A T+ +VAVK + S Q + + Y E
Sbjct: 17 TFTVLKR----YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKL-SRPFQNQTHAKRAYRE 71
Query: 61 LYFASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWC 116
L + + ++S+L + K + LV ELM + NL + + E M +
Sbjct: 72 LVLLKCVNHKN-IISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY- 128
Query: 117 KRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR S
Sbjct: 129 ----LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN 177
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 11 RRAADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
R + F +LLG+G FG V + A+K++ + + E + L +L+
Sbjct: 147 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 206
Query: 69 QDDH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H ++ L +S R+ V E + G L H + + +I
Sbjct: 207 NSRHPFLTALKYSFQT-HDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVS 262
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ YLHS V++ D+K N++LD + KI+DFGL +
Sbjct: 263 ALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 10/158 (6%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSL--QGEREFYNELYFAS 65
+R D F +++G+G F V + Q A+K+M+ + +GE + E
Sbjct: 56 VRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREER-DV 114
Query: 66 LLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
L+ D ++ L F+ + + + LV E G+L LL K + RF +A +I
Sbjct: 115 LVNGDRRWITQLHFAFQDENY-LYLVMEYYVGGDLL-TLLSKFGERIPAEMARFYLA-EI 171
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
I +H L +H DIKP NILLD +++DFG
Sbjct: 172 VMAIDSVHRLG--YVHRDIKPDNILLDRCGHIRLADFG 207
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGE---REFYNELYFASLLEQ 69
D F R LG+G FG+V+ A +A+KV+ L+ E + E+ S L
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++ + + + R R+ L+ E G L L +K E + + ++A +
Sbjct: 74 PN-ILRMYNYFHD--RKRIYLMLEFAPRGELYKEL--QKHGRFDEQ-RSATFMEELADAL 127
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
Y H VIH DIKP N+L+ + KI+DFG
Sbjct: 128 HYCHERK--VIHRDIKPENLLMGYKGELKIADFG 159
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 19/81 (23%)
Query: 395 LEGFSGELYRARHNSYDSAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISE 449
L G+ GEL +I G PS+R GT+ Y+ PE G E
Sbjct: 146 LMGYKGEL--------------KIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 450 KCDVYSYGVLLLVLIAGRRPL 470
K D++ GVL + G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPF 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGE---REFYNELYFASLLEQ 69
D F R LG+G FG+V+ A +A+KV+ L+ E + E+ S L
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++ + + + R R+ L+ E G L L +K E + + ++A +
Sbjct: 75 PN-ILRMYNYFHD--RKRIYLMLEFAPRGELYKEL--QKHGRFDEQ-RSATFMEELADAL 128
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
Y H VIH DIKP N+L+ + KI+DFG
Sbjct: 129 HYCHERK--VIHRDIKPENLLMGYKGELKIADFG 160
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 19/81 (23%)
Query: 395 LEGFSGELYRARHNSYDSAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISE 449
L G+ GEL +I G PS+R GT+ Y+ PE G E
Sbjct: 147 LMGYKGEL--------------KIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 192
Query: 450 KCDVYSYGVLLLVLIAGRRPL 470
K D++ GVL + G P
Sbjct: 193 KVDLWCAGVLCYEFLVGMPPF 213
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV 173
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 11 RRAADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
R + F +LLG+G FG V + A+K++ + + E + L +L+
Sbjct: 144 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 203
Query: 69 QDDH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H ++ L +S R+ V E + G L H + + +I
Sbjct: 204 NSRHPFLTALKYSFQT-HDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVS 259
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ YLHS V++ D+K N++LD + KI+DFGL +
Sbjct: 260 ALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV 177
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 14 ADSFSPSRLLGQGGFGS----VFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
+D + +G G + V AT + AVKV+D + +R+ E+ Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT--NMEYAVKVID----KSKRDPSEEIEILLRYGQ 79
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+++++ + K + LV ELM G L D +L +K E F + I K +
Sbjct: 80 HPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQK--FFSEREASFVLHT-IGKTV 134
Query: 130 AYLHSLNPPVIHGDIKPSNIL-LDHNF---CAKISDFGLAR 166
YLHS V+H D+KPSNIL +D + C +I DFG A+
Sbjct: 135 EYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
D + ++ G+ TP T +VAPE E CD++S G+LL ++AG P
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 15/161 (9%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT---LHDQSVAVKVMDSGSLQGEREFY----NELYFASL 66
+D + +LG GG V A LH + VAVKV+ L + FY E A+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLH-RDVAVKVL-RADLARDPSFYLRFRREAQNAAA 68
Query: 67 LEQDDHV-VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
L V V G + P +V E + L+D ++H + P M + + D
Sbjct: 69 LNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIADA 125
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NI++ K+ DFG+AR
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTG-SPMS-EFQ 481
VT T ++ GT Y++PE G + + DVYS G +L ++ G P TG SP+S +Q
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQ 230
Query: 482 RAN---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKN 261
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 14 ADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
+D + + LG G +G V L A+K++ S+ L ++L+Q D
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 72 H--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
H ++ + F + + + LV E+ G L D ++ ++ ++ I + G
Sbjct: 63 HPNIMKLYEFFEDKRNY--YLVMEVYRGGELFDEIILRQKFSEVDAA---VIMKQVLSGT 117
Query: 130 AYLHSLNPPVIHGDIKPSNILLD---HNFCAKISDFGLARLKSVG 171
YLH N ++H D+KP N+LL+ + KI DFGL+ VG
Sbjct: 118 TYLHKHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 160
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT Y+APE EKCDV+S GV+L +L+ G P
Sbjct: 168 GTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 23/170 (13%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE---REFYNE 60
+++VL+R + + +G G G V A + +++VA+K + S Q + + Y E
Sbjct: 19 TFTVLKR----YQNLKPIGSGAQGIVVAAYDAILERNVAIKKL-SRPFQNQTHAKRAYRE 73
Query: 61 LYFASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWC 116
L ++ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 74 LVLMKVVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY- 130
Query: 117 KRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 ----LLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTXDLKICDFGLARV 193
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAVK++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIXKVL---NHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G +
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGAPPYAAPEL 183
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
++ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKVVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 131 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 141 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 181
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 133 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 173
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 131 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 171
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 138 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 139 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 179
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 130 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 170
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGE---REFYNELYFASLLEQ 69
D F R LG+G FG+V+ A +A+KV+ L+ E + E+ S L
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++ + + + R R+ L+ E G L L +K E + + ++A +
Sbjct: 74 PN-ILRMYNYFHD--RKRIYLMLEFAPRGELYKEL--QKHGRFDEQ-RSATFMEELADAL 127
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
Y H VIH DIKP N+L+ + KI+DFG
Sbjct: 128 HYCHERK--VIHRDIKPENLLMGYKGELKIADFG 159
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 19/81 (23%)
Query: 395 LEGFSGELYRARHNSYDSAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISE 449
L G+ GEL +I G PS+R GT+ Y+ PE G E
Sbjct: 146 LMGYKGEL--------------KIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDE 191
Query: 450 KCDVYSYGVLLLVLIAGRRPL 470
K D++ GVL + G P
Sbjct: 192 KVDLWCAGVLCYEFLVGMPPF 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 153 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 193
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + +E + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+++D +++DFGLA+
Sbjct: 158 HSLD--LIYRDLKPENLMIDQQGYIQVTDFGLAK 189
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVK-HKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 156
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 157 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 175
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 137 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 177
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 138 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTCDLKICDFGLARV 178
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 14 ADSFSPSRLLGQGGFGS----VFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
+D + +G G + V AT + AVKV+D + +R+ E+ Q
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT--NMEYAVKVID----KSKRDPSEEIEILLRYGQ 79
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+++++ + K + LV ELM G L D +L +K E F + I K +
Sbjct: 80 HPNIITLKDVYDDGKH--VYLVTELMRGGELLDKILRQK--FFSEREASFVLHT-IGKTV 134
Query: 130 AYLHSLNPPVIHGDIKPSNIL-LDHNF---CAKISDFGLAR 166
YLHS V+H D+KPSNIL +D + C +I DFG A+
Sbjct: 135 EYLHSQG--VVHRDLKPSNILYVDESGNPECLRICDFGFAK 173
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
D + ++ G+ TP T +VAPE E CD++S G+LL ++AG P
Sbjct: 168 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
++ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKVVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLVGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKKP---PELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL++ G L D L K+ E E+ K+ I G+ YLHSL + H D+
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYLHSLQ--IAHFDL 140
Query: 145 KPSNI-LLDHNFCA---KISDFGLA 165
KP NI LLD N KI DFGLA
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E ++ G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 66
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 67 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 120
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI++FG
Sbjct: 121 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFG 155
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 145 SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 204
Query: 467 RRPLQ 471
+ P +
Sbjct: 205 KPPFE 209
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 149
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 150 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKKP---PELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL++ G L D L K+ E E+ K+ I G+ YLHSL + H D+
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYLHSLQ--IAHFDL 140
Query: 145 KPSNI-LLDHNF---CAKISDFGLA 165
KP NI LLD N KI DFGLA
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLA 165
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
GT +VAPE + + D++S GV+ +L++G P
Sbjct: 179 GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKKP---PELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL++ G L D L K+ E E+ K+ I G+ YLHSL + H D+
Sbjct: 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQ------ILNGVYYLHSLQ--IAHFDL 140
Query: 145 KPSNI-LLDHNF---CAKISDFGLA 165
KP NI LLD N KI DFGLA
Sbjct: 141 KPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGS---- 50
P F L+R D LG+G FG V +D + VAVK + S
Sbjct: 15 PTHFEKRFLKRIRD-------LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKPESGGNH 66
Query: 51 ---LQGEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK 107
L+ E E LY +++V G + + + L+ E + +G+L++ L
Sbjct: 67 IADLKKEIEILRNLYH-------ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
Query: 108 KPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K + ++ AV I KG+ YL S +H D+ N+L++ KI DFGL +
Sbjct: 120 K--NKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 174
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDHVVSVLG 78
LG+G +G V+ A T+ +++VA+K + L+ E E + SLL++ H +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRI---RLEHEEEGVPGTAIREVSLLKELQHRNIIEL 98
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
S HR+ L++E N + K P M K F + G+ + HS
Sbjct: 99 KSVIHHNHRLHLIFEYAEND--LKKYMDKNPDVSMRVIKSF--LYQLINGVNFCHSRR-- 152
Query: 139 VIHGDIKPSNILL-----DHNFCAKISDFGLAR 166
+H D+KP N+LL KI DFGLAR
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 79/191 (41%), Gaps = 22/191 (11%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REF 57
PH +Y +L+ +G+G F V A L + VAV+++D L ++
Sbjct: 11 PHIGNYRLLKT----------IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKL 60
Query: 58 YNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCK 117
+ E+ +L +H V F + LV E S G + D L+ + E
Sbjct: 61 FREVRIMKVL---NHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARA 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQA 177
+F I + Y H ++H D+K N+LLD + KI+DFG + + G +
Sbjct: 118 KFR---QIVSAVQYCHQ--KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF 172
Query: 178 DGENKNKAAEL 188
G A EL
Sbjct: 173 CGSPPYAAPEL 183
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 27/164 (16%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F R LG G FG V H ++ A+K++D + ++ + L +
Sbjct: 42 DQFERIRTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTL-------NEK 93
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR---FS------IA 122
+ + F K L + N NL L + E+ +R FS A
Sbjct: 94 RIQQAVNFPFLVK-----LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYA 148
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
I YLHSL+ +I+ D+KP N+L+D K++DFG A+
Sbjct: 149 AQIVLTFEYLHSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK 190
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
I +G+ Y+HS N V+H D+KPSN+LL+ KI DFGLAR+
Sbjct: 135 ILRGLKYIHSAN--VLHRDLKPSNLLLNTTSDLKICDFGLARV 175
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
++ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKVVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 121
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 122 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 21 RLLGQGGFGSV---FHATLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVS 75
R +G G +GSV + A L Q VAVK + SL R Y EL L+ ++ V+
Sbjct: 34 RPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN-VIG 91
Query: 76 VLGF----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
+L +S + LV LM +L + + K L + +F + + +G+ Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV---KSQALSDEHVQF-LVYQLLRGLKY 146
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+HS +IH D+KPSN+ ++ + +I DFGLAR
Sbjct: 147 IHSAG--IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 121
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 122 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFC---AKISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 14 ADSFSPSRLLGQGGFGSVFHA-TLHD-QSVAVKVMDSGSLQGEREFY----NELYFASLL 67
+D + +LG GG V A L D + VAVKV+ L + FY E A+ L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAAL 69
Query: 68 EQDDHVVSVL--GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
+V+V G + P +V E + L+D ++H + P M + + D
Sbjct: 70 NHP-AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIADA 125
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NIL+ K+ DFG+AR
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANILISATNAVKVVDFGIAR 164
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTG-SPMS-EFQ 481
V T ++ GT Y++PE G + + DVYS G +L ++ G P TG SP+S +Q
Sbjct: 173 VXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQ 230
Query: 482 RAN---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKN 261
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEYL 158
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 159 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 62 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 177
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 178 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 210
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E G + L ++ E RF A I Y
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQG---EREFYNELYFASL 66
A + F R LG+G FG+V+ A QS +A+KV+ L+ E + E+ S
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 67
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L + ++ + G+ + R ++L Y + + L K + + + ++A
Sbjct: 68 LRHPN-ILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-----FDEQRTATYITELA 121
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
++Y HS VIH DIKP N+LL KI++FG
Sbjct: 122 NALSYCHSKR--VIHRDIKPENLLLGSAGELKIANFG 156
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 412 SAASGEIPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
SA +I G PS R GT+ Y+ PE G EK D++S GVL + G
Sbjct: 146 SAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 467 RRPLQ 471
+ P +
Sbjct: 206 KPPFE 210
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 33/179 (18%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHD-------QSVAVKVMDSGS---- 50
P F L+R D LG+G FG V +D + VAVK + S
Sbjct: 3 PTHFEKRFLKRIRD-------LGEGHFGKV-ELCRYDPEGDNTGEQVAVKSLKPESGGNH 54
Query: 51 ---LQGEREFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHK 107
L+ E E LY +++V G + + + L+ E + +G+L++ L
Sbjct: 55 IADLKKEIEILRNLY-------HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 107
Query: 108 KPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
K + ++ AV I KG+ YL S +H D+ N+L++ KI DFGL +
Sbjct: 108 K--NKINLKQQLKYAVQICKGMDYLGSRQ--YVHRDLAARNVLVESEHQVKIGDFGLTK 162
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L FS + + +V E G + L ++ E RF A I Y
Sbjct: 102 PFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 12/172 (6%)
Query: 21 RLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE--REFYNELYFASLLEQDDHVVSV 76
+ +G+G F V A L + VAVK++D L ++ + E+ +L +H V
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL---NHPNIV 69
Query: 77 LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLN 136
F + LV E S G + D L+ + E +F I + Y H
Sbjct: 70 KLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQ-- 124
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAEL 188
++H D+K N+LLD + KI+DFG + + G + G A EL
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPEL 176
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 36/160 (22%)
Query: 23 LGQGGFGSVFHATLH----------------DQSVAVKVMDSGSLQGEREFYNELYFASL 66
+G+G +G+VF A D+ V + L E + N + +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 67 LEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIA 126
L D + V F + Y NG+L PE+++ S +
Sbjct: 70 LHSDKKLTLVFEFCDQDLKK-----YFDSCNGDLD--------PEIVK-----SFLFQLL 111
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
KG+ + HS N V+H D+KP N+L++ N K+++FGLAR
Sbjct: 112 KGLGFCHSRN--VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 25/169 (14%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNE--LYFAS 65
++ A + LG+G F +V+ A +Q VA+K + G ++ N L
Sbjct: 5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIK 64
Query: 66 LLEQDDH-----VVSVLGFSSNPKRHRMLLVYELMSNG---NLQDALLHKKPPELMEWCK 117
LL++ H ++ G SN + LV++ M ++D L P + +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSN-----ISLVFDFMETDLEVIIKDNSLVLTPSHIKAY-- 117
Query: 118 RFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +G+ YLH ++H D+KP+N+LLD N K++DFGLA+
Sbjct: 118 ----MLMTLQGLEYLH--QHWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 21 RLLGQGGFGSV---FHATLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVS 75
R +G G +GSV + A L Q VAVK + SL R Y EL L+ ++ V+
Sbjct: 26 RPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN-VIG 83
Query: 76 VLGF----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
+L +S + LV LM +L + + K L + +F + + +G+ Y
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV---KCQALSDEHVQF-LVYQLLRGLKY 138
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+HS +IH D+KPSN+ ++ + +I DFGLAR
Sbjct: 139 IHSAG--IIHRDLKPSNVAVNEDCELRILDFGLAR 171
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 8/162 (4%)
Query: 8 SVLRRAADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFAS 65
++ R + F +LLG+G FG V + A+K++ + + E + L
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 66 LLEQDDH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
+L+ H ++ L +S R+ V E + G L H + + +
Sbjct: 62 VLQNSRHPFLTALKYSFQT-HDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAE 117
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
I + YLHS V++ D+K N++LD + KI+DFGL +
Sbjct: 118 IVSALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLEQDD 71
D F + LG G FG V H ++ A+K++D + ++ + L +L+ +
Sbjct: 34 DQFERIKTLGTGSFGRVMLVK-HKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
V S + +V E + G + L ++ E RF A I Y
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 149
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 150 LHSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 182
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 9 VLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFASL 66
V R A + +G+G +G V+ + VAVKV + E ++ E+Y L
Sbjct: 31 VQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVL 87
Query: 67 LEQDDHVVSVLGFSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSI 121
+ ++ +LGF + + ++ L+ + NG+L D L ++ +
Sbjct: 88 MRHEN----ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKL 139
Query: 122 AVDIAKGIAYLHSL------NPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
A G+ +LH+ P + H D+K NIL+ N I+D GLA
Sbjct: 140 AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + +G G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D K++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIKVADFGFAK 189
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL----LHKKPPELMEWCKRFSIAVDIA 126
+H V +++ LV+E +S +L+D + L P L++ S +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK-----SYLFQLL 115
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
L + G ++ + VKV+ S + R+F E + + V+ VLG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN-VLPVLGAC 76
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+P L+ M G+L + +LH+ +++ + A+D+A+G+A+LH+L P +
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIP 135
Query: 141 HGDIKPSNILLDHNFCAKIS 160
+ ++++D + A+IS
Sbjct: 136 RHALNSRSVMIDEDMTARIS 155
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 81/167 (48%), Gaps = 24/167 (14%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVK--------VMDSGSLQGEREFYNEL 61
+ D++ L+G+G +G V+ A + ++VA+K ++D + E N L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 62 YFASLLEQDDHVV--SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
++ D ++ +L F + +V E+ ++ +L+ L K P L E +
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDE------LYIVLEI-ADSDLKK--LFKTPIFLTEQHVK- 134
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+I ++ G ++H +IH D+KP+N LL+ + KI DFGLAR
Sbjct: 135 TILYNLLLGEKFIHE--SGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 78/169 (46%), Gaps = 14/169 (8%)
Query: 17 FSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQG-EREFYNELYFASLLEQDDHV 73
F LG G F V A + AVK + +L+G E NE+ ++ ++ +
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN-I 82
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
V++ +P + + LV +L+S G L D ++ K ++ + + YLH
Sbjct: 83 VALEDIYESP--NHLYLVMQLVSGGELFDRIVEKG---FYTEKDASTLIRQVLDAVYYLH 137
Query: 134 SLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARLKSVGENQNQADG 179
+ ++H D+KP N+L D ISDFGL++++ G+ + A G
Sbjct: 138 RMG--IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACG 184
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
G V ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 176 GDVMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 23 LGQGGFGSVFHATL-------HDQSVAVKVM-DSGSLQGEREFYNELYFASLLEQDDHVV 74
LG+ FG V+ L Q+VA+K + D EF +E + L Q +VV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVV 92
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-------------PELMEWCKRFSI 121
+LG + K + +++ S+G+L + L+ + P +E +
Sbjct: 93 CLLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IA G+ YL S + V+H D+ N+L+ KISD GL R
Sbjct: 151 VAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFR 193
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL----LHKKPPELMEWCKRFSIAVDIA 126
+H V +++ LV+E +S +L+D + L P L++ S +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIK-----SYLFQLL 116
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 QGLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 11 RRAADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
R + F +LLG+G FG V + A+K++ + + E + L +L+
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 69 QDDH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H ++ L +S R+ V E + G L H + + +I
Sbjct: 64 NSRHPFLTALKYSFQT-HDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVS 119
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ YLHS V++ D+K N++LD + KI+DFGL +
Sbjct: 120 ALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGERE---FYNELYFASLLEQ 69
+ F +++G+G FG V + + A+K+++ + E F E L+
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER--DVLVNG 131
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D ++ L ++ + H + LV + G+L LL K +L E RF I ++ I
Sbjct: 132 DCQWITALHYAFQDENH-LYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIG-EMVLAI 188
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+H L+ +H DIKP N+LLD N +++DFG
Sbjct: 189 DSIHQLH--YVHRDIKPDNVLLDVNGHIRLADFG 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 23 LGQGGFGSVFHATL-------HDQSVAVKVM-DSGSLQGEREFYNELYFASLLEQDDHVV 74
LG+ FG V+ L Q+VA+K + D EF +E + L Q +VV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-QHPNVV 75
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP-------------PELMEWCKRFSI 121
+LG + K + +++ S+G+L + L+ + P +E +
Sbjct: 76 CLLGVVT--KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IA G+ YL S + V+H D+ N+L+ KISD GL R
Sbjct: 134 VAQIAAGMEYLSSHH--VVHKDLATRNVLVYDKLNVKISDLGLFR 176
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 21 RLLGQGGFGSV---FHATLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVS 75
R +G G +GSV + A L Q VAVK + SL R Y EL L+ ++ V+
Sbjct: 34 RPVGSGAYGSVCSAYDARLR-QKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN-VIG 91
Query: 76 VLGF----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
+L +S + LV LM +L + + K L + +F + + +G+ Y
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTTLM-GADLNNIV---KCQALSDEHVQF-LVYQLLRGLKY 146
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+HS +IH D+KPSN+ ++ + +I DFGLAR
Sbjct: 147 IHSAG--IIHRDLKPSNVAVNEDSELRILDFGLAR 179
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 12/154 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGERE---FYNELYFASLLEQ 69
+ F +++G+G FG V + + A+K+++ + E F E L+
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER--DVLVNG 147
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
D ++ L ++ + H + LV + G+L LL K +L E RF I ++ I
Sbjct: 148 DCQWITALHYAFQDENH-LYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIG-EMVLAI 204
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+H L+ +H DIKP N+LLD N +++DFG
Sbjct: 205 DSIHQLH--YVHRDIKPDNVLLDVNGHIRLADFG 236
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
LG G FG V+ A + SV A KV+D+ S E E + + +L DH V
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPP----ELMEWCKRFSIAVDIAKGIAYLHSLN 136
+ + + ++ E + G + +L + P ++ CK+ A++ YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN------YLH--D 153
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+IH D+K NIL + K++DFG++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT---LHDQSVAVKVMDSGSLQGEREFY----NELYFASL 66
+D + +LG GG V A LH + VAVKV+ L + FY E A+
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLH-RDVAVKVL-RADLARDPSFYLRFRREAQNAAA 68
Query: 67 LEQDDHVVSVL--GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
L +V+V G + P +V E + L+D ++H + P M + + D
Sbjct: 69 LNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIAD 124
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NI++ K+ DFG+AR
Sbjct: 125 ACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTG-SPMS-EFQ 481
VT T ++ GT Y++PE G + + DVYS G +L ++ G P TG SP+S +Q
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQ 230
Query: 482 RAN---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKN 261
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 158
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 159 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 8/159 (5%)
Query: 11 RRAADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
R + F +LLG+G FG V + A+K++ + + E + L +L+
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 69 QDDH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAK 127
H ++ L +S R+ V E + G L H + + +I
Sbjct: 66 NSRHPFLTALKYSFQ-THDRLCFVMEYANGGEL---FFHLSRERVFSEDRARFYGAEIVS 121
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ YLHS V++ D+K N++LD + KI+DFGL +
Sbjct: 122 ALDYLHS-EKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 158
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 159 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 190
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGE---REFYNELYFASLLEQDDHVVSVL 77
LG GG +V+ A T+ + VA+K + + E + F E++ +S L + +VS++
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN-IVSMI 77
Query: 78 GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
+ LV E + L + + P + + I GI + H +
Sbjct: 78 DVDEEDDCY--YLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKHAHDMR- 131
Query: 138 PVIHGDIKPSNILLDHNFCAKISDFGLAR 166
++H DIKP NIL+D N KI DFG+A+
Sbjct: 132 -IVHRDIKPQNILIDSNKTLKIFDFGIAK 159
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
+T T + GTV Y +PE G E D+YS G++L ++ G P
Sbjct: 166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L FS + + +V E G + L ++ E RF A I Y
Sbjct: 102 PFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L FS + + +V E G + L ++ E RF A I Y
Sbjct: 102 PFLTKLEFSFKDNSN-LYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEY 157
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 LHSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 190
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLSQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
LG G FG V+ A + SV A KV+D+ S E E + + +L DH V
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPP----ELMEWCKRFSIAVDIAKGIAYLHSLN 136
+ + + ++ E + G + +L + P ++ CK+ A++ YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN------YLH--D 153
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+IH D+K NIL + K++DFG++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 11/150 (7%)
Query: 22 LLGQGGFGSVFHA----TLHDQSVAVKVMDSGSL--QGEREFYNELYFASLLEQDDHVVS 75
LLG+G +G V TL ++V + GE E+ L + V+
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKN-VIQ 70
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
++ N ++ +M +V E G +L P + C+ + G+ YLHS
Sbjct: 71 LVDVLYNEEKQKMYMVMEYCVCG--MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ 128
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
++H DIKP N+LL KIS G+A
Sbjct: 129 G--IVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 14 ADSFSPSRLLGQGGFGSVFHA-TLHD-QSVAVKVMDSGSLQGEREFY----NELYFASLL 67
+D + +LG GG V A L D + VAVKV+ L + FY E A+ L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAAL 69
Query: 68 EQDDHVVSVL--GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
+V+V G + P +V E + L+D ++H + P M + + D
Sbjct: 70 NHP-AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIADA 125
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NI++ K+ DFG+AR
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTG-SPMS-EFQ 481
VT T ++ GT Y++PE G + + DVYS G +L ++ G P TG SP+S +Q
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQ 230
Query: 482 RAN---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKN 261
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 17/149 (11%)
Query: 23 LGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
LG G FG V+ A + SV A KV+D+ S E E + + +L DH V
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLD 101
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPP----ELMEWCKRFSIAVDIAKGIAYLHSLN 136
+ + + ++ E + G + +L + P ++ CK+ A++ YLH +
Sbjct: 102 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN------YLH--D 153
Query: 137 PPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+IH D+K NIL + K++DFG++
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+++D K++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLMIDQQGYIKVTDFGFAK 189
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 21 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 77
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 78 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 132
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 133 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 15/161 (9%)
Query: 14 ADSFSPSRLLGQGGFGSVFHA-TLHD-QSVAVKVMDSGSLQGEREFY----NELYFASLL 67
+D + +LG GG V A L D + VAVKV+ L + FY E A+ L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVL-RADLARDPSFYLRFRREAQNAAAL 69
Query: 68 EQDDHVVSVL--GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDI 125
+V+V G + P +V E + L+D ++H + P M + + D
Sbjct: 70 NHP-AIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIADA 125
Query: 126 AKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NI++ K+ DFG+AR
Sbjct: 126 CQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIAR 164
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRA 483
VT T ++ GT Y++PE G + + DVYS G +L ++ G P +Q
Sbjct: 173 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHV 232
Query: 484 N---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 233 REDPIPPSARHEGLSADLDAVVLKALAKN 261
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQG-EREFYNELYFASLLEQDD 71
D + +LG G F V A + VA+K + +L+G E NE+ ++L +
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI---AVLHKIK 74
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H V + L+ +L+S G L D ++ K + + +D K Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---Y 131
Query: 132 LHSLNPPVIHGDIKPSNIL---LDHNFCAKISDFGLARLKSVGENQNQADG 179
LH L ++H D+KP N+L LD + ISDFGL++++ G + A G
Sbjct: 132 LHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
G V ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 172 GSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E + G + L ++ E RF A I YL
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFY-AAQIVLTFEYL 143
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+L+D +++DFG A+
Sbjct: 144 HSLD--LIYRDLKPENLLIDQQGYIQVTDFGFAK 175
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 15/109 (13%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP---PELMEWCKRFS 120
S+L++ H + + ++L+ EL++ G L D L K+ E E+ K+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ-- 122
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNFCA---KISDFGLA 165
I G+ YLHSL + H D+KP NI LLD N KI DFGLA
Sbjct: 123 ----ILNGVYYLHSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 24 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 80
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 81 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 135
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 136 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYF-ASLLE-QD 70
D + L+G+G FG V A + + VA+K+ ++ ++ F N+ LLE +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI-----IKNKKAFLNQAQIEVRLLELMN 108
Query: 71 DHVVSVLGFSSNPKRHRML-----LVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVD 124
H + + + KRH M LV+E++S NL D L + + + ++F A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKF--AQQ 165
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDH--NFCAKISDFG 163
+ + +L + +IH D+KP NILL + KI DFG
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 20 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 76
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 77 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 131
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 132 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
LLG+G F V+ AT D Q +KV + EFY L+
Sbjct: 71 HLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQH 127
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDAL-LHKKPPE-LMEWCKRFSIAVDIAKGIAY 131
+ + +S++ ++ +LV EL S G L +A+ L+K PE +M S A+ + I
Sbjct: 128 MFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQ 187
Query: 132 LHSLNPPVIHGDIKPSNILLDHNF 155
+H +IHGDIKP N +L + F
Sbjct: 188 VHDCE--IIHGDIKPDNFILGNGF 209
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 13 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 69
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 70 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 124
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 125 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 80 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQG-EREFYNELYFASLLEQDD 71
D + +LG G F V A + VA+K + +L+G E NE+ ++L +
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI---AVLHKIK 74
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H V + L+ +L+S G L D ++ K + + +D K Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---Y 131
Query: 132 LHSLNPPVIHGDIKPSNIL---LDHNFCAKISDFGLARLKSVGENQNQADG 179
LH L ++H D+KP N+L LD + ISDFGL++++ G + A G
Sbjct: 132 LHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
G V ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 172 GSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 86 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 19/168 (11%)
Query: 6 SYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGE---REFYNELY 62
+++VL+R + P QG + + A L +++VA+K + S Q + + Y EL
Sbjct: 19 TFTVLKRYQN-LKPIGSGAQGIVCAAYDAIL-ERNVAIKKL-SRPFQNQTHAKRAYRELV 75
Query: 63 FASLLEQDDHVVSVLGFSSNPKR----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKR 118
+ + ++ +L + K + +V ELM + NL + + E M +
Sbjct: 76 LMKCVNHKN-IIGLLNVFTPQKSLEEFQDVYIVMELM-DANLCQVIQMELDHERMSY--- 130
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + GI +LHS +IH D+KPSNI++ + KI DFGLAR
Sbjct: 131 --LLYQMLCGIKHLHSAG--IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQG-EREFYNELYFASLLEQDD 71
D + +LG G F V A + VA+K + +L+G E NE+ ++L +
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI---AVLHKIK 74
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H V + L+ +L+S G L D ++ K + + +D K Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---Y 131
Query: 132 LHSLNPPVIHGDIKPSNIL---LDHNFCAKISDFGLARLKSVGENQNQADG 179
LH L ++H D+KP N+L LD + ISDFGL++++ G + A G
Sbjct: 132 LHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
G V ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 172 GSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREF----YNELYFASLLE 68
A + P +G G +G+V+ A V + GE E+ LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 QDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
+H ++ V S + ++ LV+E + +L+ L PP L E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK--DLM 118
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+G+ +LH+ ++H D+KP NIL+ K++DFGLAR+ S
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREF----YNELYFASLLE 68
A + P +G G +G+V+ A V + GE E+ LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 QDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
+H ++ V S + ++ LV+E + +L+ L PP L E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK--DLM 118
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+G+ +LH+ ++H D+KP NIL+ K++DFGLAR+ S
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHA-----TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V + SVAVK + L + + + + DH ++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 86 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 140
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 141 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 169
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 14/171 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQG-EREFYNELYFASLLEQDD 71
D + +LG G F V A + VA+K + +L+G E NE+ ++L +
Sbjct: 18 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI---AVLHKIK 74
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
H V + L+ +L+S G L D ++ K + + +D K Y
Sbjct: 75 HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVK---Y 131
Query: 132 LHSLNPPVIHGDIKPSNIL---LDHNFCAKISDFGLARLKSVGENQNQADG 179
LH L ++H D+KP N+L LD + ISDFGL++++ G + A G
Sbjct: 132 LHDLG--IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACG 180
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Query: 422 GGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
G V ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 172 GSVLSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 14 ADSFSPSRLLGQGGFGSVFHAT---LHDQSVAVKVMDSGSLQGEREFY----NELYFASL 66
+D + +LG GG V A LH + VAVKV+ L + FY E A+
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLH-RDVAVKVL-RADLARDPSFYLRFRREAQNAAA 85
Query: 67 LEQDDHVVSVL--GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
L +V+V G + P +V E + L+D ++H + P M + + D
Sbjct: 86 LNHPA-IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD-IVHTEGP--MTPKRAIEVIAD 141
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + + H +IH D+KP+NI++ K+ DFG+AR
Sbjct: 142 ACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIAR 181
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 424 VTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTG-SPMS-EFQ 481
VT T ++ GT Y++PE G + + DVYS G +L ++ G P TG SP+S +Q
Sbjct: 190 VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF--TGDSPVSVAYQ 247
Query: 482 RAN---LMSWARHLARNGKLIELVDQAVVKS 509
+ ARH + L +V +A+ K+
Sbjct: 248 HVREDPIPPSARHEGLSADLDAVVLKALAKN 278
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 76 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 65 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 121 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 15/167 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREF----YNELYFASLLE 68
A + P +G G +G+V+ A V + GE E+ LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 69 QDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
+H ++ V S + ++ LV+E + +L+ L PP L E K +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK--DLM 118
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+G+ +LH+ ++H D+KP NIL+ K++DFGLAR+ S
Sbjct: 119 RQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS 163
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 70 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 125
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 126 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 158
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 68 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 123
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 124 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 156
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYF-ASLLE-QD 70
D + L+G+G FG V A + + VA+K+ ++ ++ F N+ LLE +
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI-----IKNKKAFLNQAQIEVRLLELMN 89
Query: 71 DHVVSVLGFSSNPKRHRML-----LVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVD 124
H + + + KRH M LV+E++S NL D L + + + ++F A
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKF--AQQ 146
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDH--NFCAKISDFG 163
+ + +L + +IH D+KP NILL + KI DFG
Sbjct: 147 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 80 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 134
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 135 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 163
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDAL----LHKKPPELMEWCKRFSIAVDIA 126
+H V +++ LV+E + + +L+D + L P L++ S +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIK-----SYLFQLL 113
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 114 QGLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 13 AADSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ F +LLG+G FG V + A+K++ + + E + + + +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT 62
Query: 71 DH-VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
H ++ L ++ R+ V E + G L L ++ E RF A +I +
Sbjct: 63 RHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSAL 118
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
YLHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 119 EYLHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 76 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 20/161 (12%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYF-ASLLE-QD 70
D + L+G+G FG V A + + VA+K+ ++ ++ F N+ LLE +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKI-----IKNKKAFLNQAQIEVRLLELMN 108
Query: 71 DHVVSVLGFSSNPKRHRML-----LVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIAVD 124
H + + + KRH M LV+E++S NL D L + + + ++F A
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKF--AQQ 165
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDH--NFCAKISDFG 163
+ + +L + +IH D+KP NILL + KI DFG
Sbjct: 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 23 LGQGGFGSVFHATL-----HDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVS 75
LG G FG V SVAVK + L + + + + DH ++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 76 VLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSL 135
+ G P M +V EL G+L D L + L+ R+ AV +A+G+ YL S
Sbjct: 76 LYGVVLTPP---MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESK 130
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
IH D+ N+LL KI DFGL R
Sbjct: 131 R--FIHRDLAARNLLLATRDLVKIGDFGLMR 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E +S DA L P L++ S + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLAR 154
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 65 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 121 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 65 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 121 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E +S DA L P L++ S + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 9/155 (5%)
Query: 15 DSFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
+ F +LLG+G FG V + A+K++ + + E + + + +L+ H
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 73 -VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAY 131
++ L ++ R+ V E + G L L ++ E RF A +I + Y
Sbjct: 65 PFLTALKYAFQ-THDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGA-EIVSALEY 120
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
LHS + V++ DIK N++LD + KI+DFGL +
Sbjct: 121 LHSRD--VVYRDIKLENLMLDKDGHIKITDFGLCK 153
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY-----NELYFASLLEQDD--HVVS 75
+GQG FG VF A H ++ + ++ E+E + E+ LL+ ++ +++
Sbjct: 26 IGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 76 VLGFSSNPK---RHRMLLVYELMSN---GNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++P + + LV++ + G L + L+ E+ KR + + G+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
Y+H ++H D+K +N+L+ + K++DFGLAR S+ +N
Sbjct: 139 YYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 3 HRFSYSVLRRAADSFSPSRLL------GQGGFGSVFHATLHD--QSVAVKVMDSGSLQGE 54
H + LR D P LL G+G G V A + VAVK+MD Q
Sbjct: 27 HEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR 86
Query: 55 REFYNELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME 114
+NE+ ++ H V + S + ++ E + G L D + + E
Sbjct: 87 ELLFNEVV---IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNE--- 140
Query: 115 WCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+ ++ + + +AYLH+ VIH DIK +ILL + K+SDFG
Sbjct: 141 -EQIATVCEAVLQALAYLHAQG--VIHRDIKSDSILLTLDGRVKLSDFGFC 188
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY-----NELYFASLLEQDD--HVVS 75
+GQG FG VF A H ++ + ++ E+E + E+ LL+ ++ +++
Sbjct: 26 IGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 76 VLGFSSNPK---RHRMLLVYELMSN---GNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++P + + LV++ + G L + L+ E+ KR + + G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
Y+H ++H D+K +N+L+ + K++DFGLAR S+ +N
Sbjct: 139 YYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 18 SPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGE---REFYNELYFASLLEQDDH 72
SP+ + G G +GSV A + VA+K + S Q E + Y EL + Q ++
Sbjct: 28 SPTHV-GSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHM-QHEN 84
Query: 73 VVSVLGF----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
V+ +L SS + LV M +LQ + K E +++ + + KG
Sbjct: 85 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGLKFSEEKIQY-----LVYQMLKG 138
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ Y+HS V+H D+KP N+ ++ + KI DFGLAR
Sbjct: 139 LKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLAR 174
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 7/158 (4%)
Query: 11 RRAADSFSPSRLLGQGGFGSV--FHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE 68
+ + F R LG G FG V + + + A+KV+ + ++ + +L
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
H + + + ++ ++ + + G L L +K +F A ++
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPNPVAKFY-AAEVCLA 118
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ YLHS + +I+ D+KP NILLD N KI+DFG A+
Sbjct: 119 LEYLHSKD--IIYRDLKPENILLDKNGHIKITDFGFAK 154
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVC----YVAPEYGAGGDISEKCDVYSYGVLLLVLIAG 466
D +I G P + +C Y+APE + ++ D +S+G+L+ ++AG
Sbjct: 140 DKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
Query: 467 RRPL 470
P
Sbjct: 200 YTPF 203
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D F + LG G FG V + A+K++D + ++ + L +L+ +
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
V S + +V E G + L ++ E RF A I YL
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARF-YAAQIVLTFEYL 157
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
HSL+ +I+ D+KP N+++D +++DFG A+
Sbjct: 158 HSLD--LIYRDLKPENLMIDQQGYIQVTDFGFAK 189
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 30/158 (18%)
Query: 23 LGQGGFGSVFHATLHD--QSVAVK---------VMDSGSLQGEREFYNELYFASLLEQDD 71
+G+G +G VF D Q VA+K V+ +L+ R +L+Q
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----------MLKQLK 60
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--PPELMEWCKRFSIAVDIAKGI 129
H V ++ R+ LV+E + L + +++ P L++ SI + +
Sbjct: 61 HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK-----SITWQTLQAV 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
+ H N IH D+KP NIL+ + K+ DFG ARL
Sbjct: 116 NFCHKHN--CIHRDVKPENILITKHSVIKLCDFGFARL 151
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSG-----SLQG 53
P R Y++ + F LLG+G +G V AT H + VA+K ++ +L+
Sbjct: 2 PKRIVYNI----SSDFQLKSLLGEGAYGVVCSAT-HKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 54 EREFYNELYFASLLEQDDHVVSVLGFS---SNPKRHRMLLVYELMSNGNLQDALLHKKPP 110
RE +F + ++++++ S + + ++ ELM LH+
Sbjct: 57 LREIKILKHF-----KHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVIS 105
Query: 111 ELMEWCKRFSIAV-DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
M + + + LH N VIH D+KPSN+L++ N K+ DFGLAR+
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 84
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCAKLTDDHVQFLI-YQILRGLKYIH 138
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 139 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSG-----SLQG 53
P R Y++ + F LLG+G +G V AT H + VA+K ++ +L+
Sbjct: 2 PKRIVYNI----SSDFQLKSLLGEGAYGVVCSAT-HKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 54 EREFYNELYFASLLEQDDHVVSVLGFS---SNPKRHRMLLVYELMSNGNLQDALLHKKPP 110
RE +F + ++++++ S + + ++ ELM LH+
Sbjct: 57 LREIKILKHF-----KHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVIS 105
Query: 111 ELMEWCKRFSIAV-DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
M + + + LH N VIH D+KPSN+L++ N K+ DFGLAR+
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 108
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 163 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 108
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 163 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 98
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 99 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 152
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 153 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 183
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY-----NELYFASLLEQDD--HVVS 75
+GQG FG VF A H ++ + ++ E+E + E+ LL+ ++ +++
Sbjct: 26 IGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 76 VLGFSSNPK---RHRMLLVYELMSN---GNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++P + + LV++ + G L + L+ E+ KR + + G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 138
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
Y+H ++H D+K +N+L+ + K++DFGLAR S+ +N
Sbjct: 139 YYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 180
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 32/173 (18%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 77
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 128
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLARLKSVGENQNQA 177
I YLHS+N + H D+KP N+L N K++DFG A+ ++ GE +++
Sbjct: 129 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK-ETTGEKYDKS 178
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 81/164 (49%), Gaps = 22/164 (13%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY-----NELYFASLLEQDD--HVVS 75
+GQG FG VF A H ++ + ++ E+E + E+ LL+ ++ +++
Sbjct: 25 IGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 76 VLGFSSNPK---RHRMLLVYELMSN---GNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
+ ++P + + LV++ + G L + L+ E+ KR + + G+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR--VMQMLLNGL 137
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
Y+H ++H D+K +N+L+ + K++DFGLAR S+ +N
Sbjct: 138 YYIH--RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKN 179
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 107
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 108 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 161
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 162 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 2 PHRFSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSG-----SLQG 53
P R Y++ + F LLG+G +G V AT H + VA+K ++ +L+
Sbjct: 2 PKRIVYNI----SSDFQLKSLLGEGAYGVVCSAT-HKPTGEIVAIKKIEPFDKPLFALRT 56
Query: 54 EREFYNELYFASLLEQDDHVVSVLGFS---SNPKRHRMLLVYELMSNGNLQDALLHKKPP 110
RE +F + ++++++ S + + ++ ELM LH+
Sbjct: 57 LREIKILKHF-----KHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVIS 105
Query: 111 ELMEWCKRFSIAV-DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
M + + + LH N VIH D+KPSN+L++ N K+ DFGLAR+
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKVLHGSN--VIHRDLKPSNLLINSNCDLKVCDFGLARI 161
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 84
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 139 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KXQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDXELKILDFGLAR 173
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 84
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 139 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 93
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 148 SAD--IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 94
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 149 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 36/179 (20%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY------------- 58
+ + + R L QG F + ++ A+K + L+ +R+F
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 59 ----NELYFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME 114
NEL + + ++++ ++ G +N + ++YE M N D++L K
Sbjct: 88 DDFKNELQIITDI-KNEYCLTCEGIITN--YDEVYIIYEYMEN----DSIL-KFDEYFFV 139
Query: 115 WCKRFS--IAVDIAKGI--------AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
K ++ I + + K I +Y+H+ + H D+KPSNIL+D N K+SDFG
Sbjct: 140 LDKNYTCFIPIQVIKCIIKSVLNSFSYIHN-EKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 63
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 118
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 119 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 68
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 123
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 61
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 116
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 60
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 115
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 GLAFCHSHR--VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 20/158 (12%)
Query: 18 SPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGE---REFYNELYFASLLEQDDH 72
SP+ + G G +GSV A + VA+K + S Q E + Y EL + Q ++
Sbjct: 46 SPTHV-GSGAYGSVCSAIDKRSGEKVAIKKL-SRPFQSEIFAKRAYRELLLLKHM-QHEN 102
Query: 73 VVSVLGF----SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
V+ +L SS + LV M +LQ + + E +++ + + KG
Sbjct: 103 VIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIMGMEFSEEKIQY-----LVYQMLKG 156
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ Y+HS V+H D+KP N+ ++ + KI DFGLAR
Sbjct: 157 LKYIHSAG--VVHRDLKPGNLAVNEDCELKILDFGLAR 192
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 116
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 59
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 114
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 115 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHA-TLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDHVVSVLGF 79
+G+G +G V+ A + ++ A+K + L+ E E + S+L++ H V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL----MEWCKRFSIAVDIAKGIAYLHSL 135
+ R++LV+E + QD KK ++ +E S + + GIAY H
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDL---KKLLDVCEGGLESVTAKSFLLQLLNGIAYCH-- 117
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ V+H D+KP N+L++ KI+DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KXQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 116
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHA-TLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDHVVSVLGF 79
+G+G +G V+ A + ++ A+K + L+ E E + S+L++ H V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL----MEWCKRFSIAVDIAKGIAYLHSL 135
+ R++LV+E + QD KK ++ +E S + + GIAY H
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDL---KKLLDVCEGGLESVTAKSFLLQLLNGIAYCH-- 117
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ V+H D+KP N+L++ KI+DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 65
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 66 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 120
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 121 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 72/152 (47%), Gaps = 17/152 (11%)
Query: 23 LGQGGFGSVFHATLH---DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
LG+G F S+ +H +Q+ AVK++ S + E E+ L E ++V +
Sbjct: 19 LGEGSF-SICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEV 74
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ + LV EL++ G L + + KK E I + ++++H + V
Sbjct: 75 FHD--QLHTFLVMELLNGGELFERIKKKKHFSETEAS---YIMRKLVSAVSHMHDVG--V 127
Query: 140 IHGDIKPSNILL---DHNFCAKISDFGLARLK 168
+H D+KP N+L + N KI DFG ARLK
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFGFARLK 159
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
T+ Y APE E CD++S GV+L +++G+ P Q
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 100
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 155 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 99
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 100 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 153
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 154 SAD--IIHRDLKPSNLAVNEDXELKILDFGLAR 184
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 23 LGQGGFGSVFHA-TLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDHVVSVLGF 79
+G+G +G V+ A + ++ A+K + L+ E E + S+L++ H V +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKI---RLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL----MEWCKRFSIAVDIAKGIAYLHSL 135
+ R++LV+E + QD KK ++ +E S + + GIAY H
Sbjct: 67 DVIHTKKRLVLVFEHLD----QDL---KKLLDVCEGGLESVTAKSFLLQLLNGIAYCH-- 117
Query: 136 NPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ V+H D+KP N+L++ KI+DFGLAR
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR 148
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 93
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 148 SAD--IIHRDLKPSNLAVNEDXELKILDFGLAR 178
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 68
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 69 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 123
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 124 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 116
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K+ E S
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 100
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 155 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K+ E S
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 100
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 101 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 154
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 155 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 185
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSV 170
+ +G+AY H V+H D+KP N+L++ K++DFGLAR KS+
Sbjct: 109 LLRGLAYCH--RQKVLHRDLKPQNLLINERGELKLADFGLARAKSI 152
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K+ E S
Sbjct: 66 VSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 95
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 150 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 13 AADSFSPSRLLGQGGFGSVFHAT-------LHDQSVAVKVMDSGSLQGEREFYNELYFAS 65
A + P +G G +G+V+ A + +SV V G E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 66 LLEQDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRF 119
LE +H ++ V S + ++ LV+E + + +L+ L PP L E K
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-- 123
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+ +G+ +LH+ ++H D+KP NIL+ K++DFGLAR+ S
Sbjct: 124 DLMRQFLRGLDFLHANC--IVHRDLKPENILVTSGGTVKLADFGLARIYS 171
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 62
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 63 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 117
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 99
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 100 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 153
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 154 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 184
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K+ E S
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 49/106 (46%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K+ E S
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT---SFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 95
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 150 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 90
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 145 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 95
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 150 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 121
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 122 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 172
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 173 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 90
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 145 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 64 ASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV 123
S+L Q H + R ++L+ EL+S G L D L K E + + S
Sbjct: 66 VSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK---ESLSEEEATSFIK 122
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNI-LLDHNF---CAKISDFGLA 165
I G+ YLH+ + H D+KP NI LLD N K+ DFGLA
Sbjct: 123 QILDGVNYLHT--KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 93
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 148 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 87
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 88 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 141
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 142 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 172
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 75
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 126
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 127 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 95
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 96 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 149
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 150 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 180
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 77
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 128
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 129 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 182 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 107
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 108 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 161
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 162 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 192
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 111
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 112 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 165
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 166 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 90
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 145 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 175
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 77
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 78 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 128
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 129 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 108
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 109 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 162
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 163 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 111
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 112 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 165
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 166 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
I +G+ Y+HS + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 163 ILRGLKYIHSAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 202
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 173
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 75
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 76 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 126
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 127 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 166
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 217
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 82
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 83 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 133
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 134 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 173
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 94
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 149 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 86
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 87 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 140
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 141 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 171
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 83
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 84 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 134
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 135 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 174
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 76
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 77 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 127
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 128 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 167
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 84
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 85 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 138
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 139 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 169
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 127
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 128 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 178
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 179 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 218
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 232 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 93
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 94 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 147
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 148 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 178
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 37 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 91
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 92 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 142
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 143 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 182
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+GQG G+V+ A Q VA++ M+ + NE+ ++ ++ + V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLD 84
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E ++ G+L D + M+ + ++ + + + +LHS VI
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS--NQVI 138
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK NILL + K++DFG
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 85
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 86 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 139
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 140 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 14/177 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
D + R LG+G + VF A +++ VAVK++ + + L L +
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKIL---ENLRGGPN 93
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+L+DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+GQG G+V+ A Q VA++ M+ + NE+ ++ ++ + V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLD 84
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E ++ G+L D + M+ + ++ + + + +LHS VI
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS--NQVI 138
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK NILL + K++DFG
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+GQG G+V+ A Q VA++ M+ + NE+ ++ ++ + V
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLD 84
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E ++ G+L D + M+ + ++ + + + +LHS VI
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS--NQVI 138
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK NILL + K++DFG
Sbjct: 139 HRDIKSDNILLGMDGSVKLTDFGF 162
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 31/162 (19%)
Query: 20 SRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S++LG G G V + A+K++ + RE EL++ + Q H+V ++
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-KARREV--ELHWRA--SQCPHIVRIV 81
Query: 78 GFSSN--PKRHRMLLVYELMSNGNL----QD----ALLHKKPPELMEWCKRFSIAVDIAK 127
N R +L+V E + G L QD A ++ E+M+ I +
Sbjct: 82 DVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMK---------SIGE 132
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
I YLHS+N + H D+KP N+L N K++DFG A+
Sbjct: 133 AIQYLHSIN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 172
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 90
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 91 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 144
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 145 SAD--IIHRDLKPSNLAVNEDSELKILDFGLAR 175
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 23/159 (14%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQS--VAVKVMDSGSLQGE---REFYNELYFASLLEQ 69
D F R LG+G FG+V+ A VA+KV+ ++ E + E+ + L
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWC-----KRFSIAVD 124
+ ++ + + + R R+ L+ E G L EL + C + +I +
Sbjct: 83 PN-ILRLYNYFYD--RRRIYLILEYAPRGELYK--------ELQKSCTFDEQRTATIMEE 131
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG 163
+A + Y H VIH DIKP N+LL KI+DFG
Sbjct: 132 LADALMYCHGKK--VIHRDIKPENLLLGLKGELKIADFG 168
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 418 IPKSGGVTSTPSMR-----GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
I G PS+R GT+ Y+ PE G +EK D++ GVL L+ G P +
Sbjct: 164 IADFGWSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 85
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 86 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 139
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 140 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 170
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 94
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 149 SAD--IIHRDLKPSNLAVNEDSELKILDFGLAR 179
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 17/155 (10%)
Query: 20 SRLLGQGGFGSV---FHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSV 76
S++LG G G V F+ ++ + D + E E + + AS Q H+V +
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELH---WRAS---QCPHIVRI 120
Query: 77 LGFSSN--PKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ N R +L+V E + G L + + E + I I + I YLHS
Sbjct: 121 VDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTER-EASEIXKSIGEAIQYLHS 179
Query: 135 LNPPVIHGDIKPSNILLDH---NFCAKISDFGLAR 166
+N + H D+KP N+L N K++DFG A+
Sbjct: 180 IN--IAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD +S GV+ +L+ G P
Sbjct: 226 TPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG VF L + V V L A +L+Q H +V ++G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ ++ + +V EL+ G+ L + + + D A G+ YL S I
Sbjct: 182 T--QKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES--KCCI 235
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
H D+ N L+ KISDFG++R ++ G
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADG 266
Score = 29.3 bits (64), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 414 ASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLL 460
A G SGG+ P V + APE G S + DV+S+G+LL
Sbjct: 264 ADGVXAASGGLRQVP-----VKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+GQG G+V+ A Q VA++ M+ + NE+ ++ ++ + V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLD 85
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E ++ G+L D + M+ + ++ + + + +LHS VI
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS--NQVI 139
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H DIK NILL + K++DFG
Sbjct: 140 HRDIKSDNILLGMDGSVKLTDFGF 163
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 8/151 (5%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLGFS 80
+G+G FG VF L + V V L A +L+Q H +V ++G
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+ ++ + +V EL+ G+ L + + + D A G+ YL S I
Sbjct: 182 T--QKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTLLQMVGDAAAGMEYLES--KCCI 235
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
H D+ N L+ KISDFG++R ++ G
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEADG 266
Score = 29.3 bits (64), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 414 ASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLL 460
A G SGG+ P V + APE G S + DV+S+G+LL
Sbjct: 264 ADGVYAASGGLRQVP-----VKWTAPEALNYGRYSSESDVWSFGILL 305
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 94
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 95 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 148
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGLAR
Sbjct: 149 SAD--IIHRDLKPSNLAVNEDCELKILDFGLAR 179
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHD--QSVAVK--------VMDSGSLQGEREFYNEL 61
D++ L+G+G +G V+ A + ++VA+K ++D + E N L
Sbjct: 23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82
Query: 62 YFASLLEQDDHVV--SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
++ D ++ +L F + +V E+ ++ +L+ L K P L E +
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDE------LYIVLEI-ADSDLKK--LFKTPIFLTEEHIK- 132
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADG 179
+I ++ G ++H +IH D+KP+N LL+ + K+ DFGLAR + ++ N +
Sbjct: 133 TILYNLLLGENFIHE--SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 180 ENKNK 184
+N+
Sbjct: 191 LEENE 195
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 61
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 62 PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQGL 116
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
++ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 117 SFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH---DQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
D + +G G + SV +H + AVK++D + +R+ E+ Q
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQH 75
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+++++ + K + +V ELM G L D +L +K + ++ I K +
Sbjct: 76 PNIITLKDVYDDGKY--VYVVTELMKGGELLDKILRQK---FFSEREASAVLFTITKTVE 130
Query: 131 YLHSLNPPVIHGDIKPSNIL-LDHNF---CAKISDFGLAR 166
YLH+ V+H D+KPSNIL +D + +I DFG A+
Sbjct: 131 YLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
D + ++ G+ TP T +VAPE CD++S GVLL ++ G P
Sbjct: 163 DFGFAKQLRAENGLLMTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREF----YNELYFA 64
L RA + +G+G +G VF A L + V + GE E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 65 SLLEQDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
LE +H + V S + ++ LV+E + L K P +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD--LTTYLDKVPEPGVPTETIK 123
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+ + +G+ +LHS V+H D+KP NIL+ + K++DFGLAR+ S
Sbjct: 124 DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 14/170 (8%)
Query: 10 LRRAADSFSPSRLLGQGGFGSVFHAT-LHDQSVAVKVMDSGSLQGEREF----YNELYFA 64
L RA + +G+G +G VF A L + V + GE E+
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 65 SLLEQDDH-----VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRF 119
LE +H + V S + ++ LV+E + L K P +
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQD--LTTYLDKVPEPGVPTETIK 123
Query: 120 SIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+ + +G+ +LHS V+H D+KP NIL+ + K++DFGLAR+ S
Sbjct: 124 DMMFQLLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 72 HVVSVLGFSSNPKRHR--MLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
H+V +L N + +L++ E M G L + + E + I DI I
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER-EAAEIMRDIGTAI 122
Query: 130 AYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLAR 166
+LHS N + H D+KP N+L + + K++DFG A+
Sbjct: 123 QFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 160
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 436 YVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
YVAPE + CD++S GV++ +L+ G P
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 72 HVVSVLGFSSNPKRHR--MLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGI 129
H+V +L N + +L++ E M G L + + E + I DI I
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTER-EAAEIMRDIGTAI 141
Query: 130 AYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLAR 166
+LHS N + H D+KP N+L + + K++DFG A+
Sbjct: 142 QFLHSHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 433 TVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
T YVAPE + CD++S GV++ +L+ G P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKS 169
+ +G+ +LHS V+H D+KP NIL+ + K++DFGLAR+ S
Sbjct: 129 LLRGLDFLHSHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYS 171
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KSQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DFGL R
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDSELKILDFGLCR 173
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 13/159 (8%)
Query: 13 AADSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
+ ++F +G+G +G V+ A L + VA+K + + + E + SLL++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKEL 62
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAK 127
+H V +++ LV+E + DA L P L++ S + +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIK-----SYLFQLLQ 117
Query: 128 GIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
G+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 118 GLAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 99 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 152
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 153 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 207
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDD 71
D + ++G G V A + VA+K ++ Q E E+ + Q
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEI---QAMSQCH 71
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH-----KKPPELMEWCKRFSIAVDIA 126
H V ++S + + LV +L+S G++ D + H + +++ +I ++
Sbjct: 72 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
+G+ YLH IH D+K NILL + +I+DFG++ + G
Sbjct: 132 EGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 174
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 15 DSFSPSRLLGQGGFGSVFHATL--HDQSVAVKVMDSGSLQGER-EFYNELYFASLLEQDD 71
D + ++G G V A + VA+K ++ Q E E+ + Q
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEI---QAMSQCH 66
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLH-----KKPPELMEWCKRFSIAVDIA 126
H V ++S + + LV +L+S G++ D + H + +++ +I ++
Sbjct: 67 HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 127 KGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVG 171
+G+ YLH IH D+K NILL + +I+DFG++ + G
Sbjct: 127 EGLEYLHKNGQ--IHRDVKAGNILLGEDGSVQIADFGVSAFLATG 169
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI D+GLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDYGLAR 173
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 92 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 145
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 146 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 200
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IAV I K + +LHS VIH D+KPSN+L++ K+ DFG++
Sbjct: 158 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 147 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IAV I K + +LHS VIH D+KPSN+L++ K+ DFG++
Sbjct: 114 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + L ++ RF + +I K + Y
Sbjct: 93 IITLADIVKDPVSRTPALVFEHVNNTDFKQLY-----QTLTDYDIRFYM-YEILKALDYC 146
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 147 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 201
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAV-KVMDSGSLQGEREFYNELYFASLLEQDD 71
++F +G+G +G V+ A L + VA+ K+ +G + SLL++ +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS--TAIREISLLKELN 60
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKG 128
H V +++ LV+E + DA L P L++ S + +G
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 115
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 15/158 (9%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAV-KVMDSGSLQGEREFYNELYFASLLEQDD 71
++F +G+G +G V+ A L + VA+ K+ +G + SLL++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS--TAIREISLLKELN 59
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKG 128
H V +++ LV+E + DA L P L++ S + +G
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK-----SYLFQLLQG 114
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 115 LAFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 DSFSPSRLLGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++F +G+G +G V+ A L + VA+K + + + E + SLL++ +H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT-ETEGVPSTAIREISLLKELNH 60
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDA-LLHKKPPELMEWCKRFSIAVDIAKGI 129
V +++ LV+E + DA L P L++ S + +G+
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIK-----SYLFQLLQGL 115
Query: 130 AYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
A+ HS V+H D+KP N+L++ K++DFGLAR
Sbjct: 116 AFCHSHR--VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA+K++ GS + N +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 124
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 125 LA--VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S+PK + + + +L NL+D + + E E I + IA+ + +LHS ++
Sbjct: 130 SSPKVY-LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKG--LM 186
Query: 141 HGDIKPSNILLDHNFCAKISDFGLA 165
H D+KPSNI + K+ DFGL
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLV 211
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLI 464
GT Y++PE G + S K D++S G++L L+
Sbjct: 238 GTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA+K++ GS + N +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 124
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 125 LA--VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++++ +P LV+E ++N + + + L ++ RF + +I K + Y
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDFK-----QLRQTLTDYDIRFYM-YEILKALDYC 147
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
HS+ ++H D+KP N+++DH ++ D+GLA G+ N K EL
Sbjct: 148 HSMG--IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 73/174 (41%), Gaps = 21/174 (12%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+G GGF V A L + VA+K+MD +L + A + H+ + +
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQL--YH 75
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+++ +V E G L D ++ + L E R + I +AY+HS
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRV-VFRQIVSAVAYVHSQG--YA 130
Query: 141 HGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAELESNCGA 194
H D+KP N+L D K+ DFGL K G NK L++ CG+
Sbjct: 131 HRDLKPENLLFDEYHKLKLIDFGLCA-KPKG-----------NKDYHLQTCCGS 172
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 419 PKSGGVTSTPSMRGTVCYVAPEYGAGGD-ISEKCDVYSYGVLLLVLIAGRRPLQVTGSPM 477
PK + G++ Y APE G + + DV+S G+LL VL+ G P
Sbjct: 158 PKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP-------- 209
Query: 478 SEFQRANLMSWARHLAR 494
F N+M+ + + R
Sbjct: 210 --FDDDNVMALYKKIMR 224
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA+K++ GS + N +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 123
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 124 LA--VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 165
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDH 72
++ F LG G + +V+ V V + + E + SL+++ H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNG--NLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
V + +++ LV+E M N D+ P +E + +G+A
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ H ++H D+KP N+L++ K+ DFGLAR
Sbjct: 123 FCHE--NKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA+K++ GS + N +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 124
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 125 LA--VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 13/167 (7%)
Query: 5 FSYSVLRRAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNEL 61
F + + +D++ LG+G F SV +H + A K++++ L R+F
Sbjct: 19 FMMNASTKFSDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLE 76
Query: 62 YFASLLEQDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSI 121
A + + H V S + LV++L++ G L + ++ + E
Sbjct: 77 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHC 133
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLA 165
I + IAY HS ++H ++KP N+LL K++DFGLA
Sbjct: 134 IQQILESIAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 25/154 (16%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKV---------MDSGSLQGEREFYNELYFASLLEQDDHV 73
LG G FG V H + + V V +D +++ E N+L+ L+ D
Sbjct: 59 LGSGAFG-VVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD-- 115
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
F ++ M+L+ E +S G L D + + M + + +G+ ++H
Sbjct: 116 ----AFED---KYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQACEGLKHMH 166
Query: 134 SLNPPVIHGDIKPSNILLDHNFCA--KISDFGLA 165
+ ++H DIKP NI+ + + KI DFGLA
Sbjct: 167 EHS--IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 34/175 (19%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH 72
+ LG+G FG V AT +VAVK++ + E R+ +E ++L+Q +H
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF---NVLKQVNH 85
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------------------PPE- 111
+ + + + +LL+ E G+L+ L + P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A I++G+ YL ++ ++H D+ NIL+ KISDFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMS--LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA+K++ GS + N +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 76 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 130
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 131 LA--VQYLHENG--IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 172
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 79/218 (36%), Gaps = 79/218 (36%)
Query: 23 LGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDHVV 74
LG+G FG V A+ ++VAVK++ G+ E + EL + + +VV
Sbjct: 35 LGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVV 94
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNL--------------QDALLH-------------- 106
++LG + M++V E GNL +DA LH
Sbjct: 95 NLLGACTKQGGPLMVIV-EYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEPGLEQ 153
Query: 107 -KKP-------------------------------------PELMEWCKRFSIAVDIAKG 128
KKP P ME S + +A+G
Sbjct: 154 GKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITME--DLISYSFQVARG 211
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +L S IH D+ NILL N KI DFGLAR
Sbjct: 212 MEFLSSRK--CIHRDLAARNILLSENNVVKICDFGLAR 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 34/175 (19%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH 72
+ LG+G FG V AT +VAVK++ + E R+ +E ++L+Q +H
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF---NVLKQVNH 85
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------------------PPE- 111
+ + + + +LL+ E G+L+ L + P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A I++G+ YL + ++H D+ NIL+ KISDFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 76/175 (43%), Gaps = 34/175 (19%)
Query: 21 RLLGQGGFGSVFHATLHD-------QSVAVKVMDSGSLQGE-REFYNELYFASLLEQDDH 72
+ LG+G FG V AT +VAVK++ + E R+ +E ++L+Q +H
Sbjct: 29 KTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF---NVLKQVNH 85
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK--------------------PPE- 111
+ + + + +LL+ E G+L+ L + P E
Sbjct: 86 PHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER 145
Query: 112 LMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ S A I++G+ YL + ++H D+ NIL+ KISDFGL+R
Sbjct: 146 ALTMGDLISFAWQISQGMQYLAEMK--LVHRDLAARNILVAEGRKMKISDFGLSR 198
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 426 STPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGS 475
+T + GT Y+APE G D D ++ GVL+ ++AGR P + GS
Sbjct: 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F R++G+G + V L D+ A++V+ + + + + EQ +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 75 SVLGFSSNPKRH-RMLLVYELMSNGNLQDALLH-KKPPELMEWCKRFSIAVDIAKGIAYL 132
++G S + R+ V E ++ G+L + H ++ +L E RF A +I+ + YL
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLALNYL 169
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
H +I+ D+K N+LLD K++D+G+ +
Sbjct: 170 HERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCK 201
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
+GQG G+V+ A Q VA++ M+ + NE+ ++ ++ + V
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL---VMRENKNPNIVNYLD 85
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
S + +V E ++ G+L D + M+ + ++ + + + +LHS VI
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLHS--NQVI 139
Query: 141 HGDIKPSNILLDHNFCAKISDFGL 164
H +IK NILL + K++DFG
Sbjct: 140 HRNIKSDNILLGMDGSVKLTDFGF 163
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 22 LLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYF---ASLLEQ------D 70
LLG+GGFG+VF H VA+KV+ + G + + +LL +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
V+ +L + + ML++ + +L D + K P L E R + I
Sbjct: 98 PGVIRLLDWFET-QEGFMLVLERPLPAQDLFDYITEKGP--LGEGPSRCFFG-QVVAAIQ 153
Query: 131 YLHSLNPPVIHGDIKPSNILLD-HNFCAKISDFG 163
+ HS V+H DIK NIL+D CAK+ DFG
Sbjct: 154 HCHSRG--VVHRDIKDENILIDLRRGCAKLIDFG 185
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI DF LAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDFYLAR 173
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 73/190 (38%), Gaps = 30/190 (15%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGERE-FYNELYFASLLEQDD 71
D F R LG G FG V + +K ++ Q E E+ +L+ D
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEI---EVLKSLD 78
Query: 72 HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKP----------PELMEWCKRFSI 121
H + F H M +V E G L + ++ + ELM+
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMK------- 131
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDH---NFCAKISDFGLARLKSVGENQNQAD 178
+ +AY HS + V+H D+KP NIL + KI DFGLA L E+ A
Sbjct: 132 --QMMNALAYFHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA 187
Query: 179 GENKNKAAEL 188
G A E+
Sbjct: 188 GTALYMAPEV 197
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQR 482
GT Y+APE D++ KCD++S GV++ L+ G P TG+ + E Q+
Sbjct: 188 GTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPF--TGTSLEEVQQ 235
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 63/140 (45%), Gaps = 4/140 (2%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMD--SGSLQGEREFYNELYFASLLEQDDHVVSVLGFS 80
L + G ++ + VKV+ S + R+F E + + V+ VLG
Sbjct: 18 LNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPN-VLPVLGAC 76
Query: 81 SNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVI 140
+P L+ G+L + +LH+ +++ + A+D A+G A+LH+L P +
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYN-VLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIP 135
Query: 141 HGDIKPSNILLDHNFCAKIS 160
+ ++ +D + A+IS
Sbjct: 136 RHALNSRSVXIDEDXTARIS 155
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKK---PPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL+S G L D L K+ E ++ K+ I G+ YLHS + H D+
Sbjct: 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGVHYLHS--KRIAHFDL 134
Query: 145 KPSNI-LLDHNF---CAKISDFGLA 165
KP NI LLD N K+ DFG+A
Sbjct: 135 KPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKK---PPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL+S G L D L K+ E ++ K+ I G+ YLHS + H D+
Sbjct: 90 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGVHYLHS--KRIAHFDL 141
Query: 145 KPSNI-LLDHNF---CAKISDFGLA 165
KP NI LLD N K+ DFG+A
Sbjct: 142 KPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 79 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 136 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 179 GENK 182
K
Sbjct: 188 THGK 191
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 79 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 136 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 187
Query: 179 GENK 182
K
Sbjct: 188 THGK 191
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 26 GGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGFSSNP 83
G FG V+ A + SV A KV+D+ S E E + + +L DH V +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 84 KRHRMLLVYELMSNGNLQDALLHKKPP----ELMEWCKRFSIAVDIAKGIAYLHSLNPPV 139
+ + ++ E + G + +L + P ++ CK+ + YLH + +
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ------TLDALNYLH--DNKI 129
Query: 140 IHGDIKPSNILLDHNFCAKISDFGLA 165
IH D+K NIL + K++DFG++
Sbjct: 130 IHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 45/85 (52%), Gaps = 15/85 (17%)
Query: 88 MLLVYELMSNGNLQDALLHKKP---PELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ EL+S G L D L K+ E ++ K+ I G+ YLHS + H D+
Sbjct: 104 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQ------ILDGVHYLHS--KRIAHFDL 155
Query: 145 KPSNI-LLDHNF---CAKISDFGLA 165
KP NI LLD N K+ DFG+A
Sbjct: 156 KPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 422 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 478
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 479 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 530
Query: 179 GENK 182
K
Sbjct: 531 THGK 534
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 421 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 477
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 478 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529
Query: 179 GENK 182
K
Sbjct: 530 THGK 533
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 107 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 158
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 159 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 198
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+ V I K + YL + VIH D+KPSNILLD K+ DFG++
Sbjct: 129 MTVAIVKALYYLKEKHG-VIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 77 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 134 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 185
Query: 179 GENK 182
K
Sbjct: 186 THGK 189
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 126 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 177
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 178 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 217
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 106 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 157
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 158 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 90 LVYELMSNGNLQDALLH-KKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSN 148
+ E M G+L L K+ PE E + SIAV +G+AYL + ++H D+KPSN
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPE--EILGKVSIAV--LRGLAYLREKHQ-IMHRDVKPSN 145
Query: 149 ILLDHNFCAKISDFGLA 165
IL++ K+ DFG++
Sbjct: 146 ILVNSRGEIKLCDFGVS 162
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y+APE G S + D++S G+ L+ L GR P+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 63 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 120 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQ 171
Query: 179 GENK 182
K
Sbjct: 172 THGK 175
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 69 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 126 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 177
Query: 179 GENK 182
K
Sbjct: 178 THGK 181
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLE 68
+ +D++ LG+G F SV +H + A K++++ L R+F A +
Sbjct: 3 KFSDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICR 60
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ H V S + LV++L++ G L + ++ + E I +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILES 117
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHN---FCAKISDFGLA 165
IAY HS ++H ++KP N+LL K++DFGLA
Sbjct: 118 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 106 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 157
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 158 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 197
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 20 SRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVL 77
S LLG+G + V A + + AVK+++ + + E+ + + +++ ++
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 78 GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
F + R LV+E + G++ L H + + + + D+A + +LH+
Sbjct: 78 EFFEDDTR--FYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFLHTKG- 131
Query: 138 PVIHGDIKPSNILL---DHNFCAKISDFGLARLKSVGENQNQADGENKNKAAELESNCGA 194
+ H D+KP NIL + KI DF L G + EL + CG+
Sbjct: 132 -IAHRDLKPENILCESPEKVSPVKICDFDL------GSGMKLNNSCTPITTPELTTPCGS 184
Query: 195 A 195
A
Sbjct: 185 A 185
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 63 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 120 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 171
Query: 179 GENK 182
K
Sbjct: 172 THGK 175
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 426 STPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGS 475
+T GT Y+APE G D D ++ GVL+ ++AGR P + GS
Sbjct: 166 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F R++G+G + V L D+ A+KV+ + + + + EQ +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 75 SVLGFSSNPKRH-RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
++G S + R+ V E ++ G+L + ++ +L E RF A +I+ + YLH
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSA-EISLALNYLH 127
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+I+ D+K N+LLD K++D+G+ +
Sbjct: 128 ERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCK 158
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 83 PKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
P H++ LV ELM Q ++H + P+ +++ I G+ LH
Sbjct: 104 PAMHKLYLVTELMRTDLAQ--VIHDQRIVISPQHIQY-----FMYHILLGLHVLHEAG-- 154
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAEL 188
V+H D+ P NILL N I DF LAR + N+ +A EL
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLE 68
+ +D++ LG+G F SV +H + A K++++ L R+F A +
Sbjct: 3 KFSDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICR 60
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ H V S + LV++L++ G L + ++ + E I +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILES 117
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHN---FCAKISDFGLA 165
IAY HS ++H ++KP N+LL K++DFGLA
Sbjct: 118 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
IAV I K + +LHS VIH D+KPSN+L++ K DFG++
Sbjct: 141 IAVSIVKALEHLHS-KLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 59 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 115
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 116 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 167
Query: 179 GENK 182
K
Sbjct: 168 THGK 171
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 13/160 (8%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHATLHDQS---VAVKVMDSGSLQGEREFYNELYFASLLE 68
+ +D++ LG+G F SV +H + A K++++ L R+F A +
Sbjct: 2 KFSDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICR 59
Query: 69 QDDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKG 128
+ H V S + LV++L++ G L + ++ + E I +
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILES 116
Query: 129 IAYLHSLNPPVIHGDIKPSNILLDHN---FCAKISDFGLA 165
IAY HS ++H ++KP N+LL K++DFGLA
Sbjct: 117 IAYCHSNG--IVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 426 STPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGS 475
+T GT Y+APE G D D ++ GVL+ ++AGR P + GS
Sbjct: 162 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 211
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F R++G+G + V L D+ A+KV+ + + + + EQ +
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 75 SVLGFSSNPKRH-RMLLVYELMSNGNLQDALLH-KKPPELMEWCKRFSIAVDIAKGIAYL 132
++G S + R+ V E ++ G+L + H ++ +L E RF A +I+ + YL
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLALNYL 122
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
H +I+ D+K N+LLD K++D+G+ +
Sbjct: 123 HERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCK 154
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 64 ASLLEQDD--HVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALL---HKKPPELMEWCKR 118
A++++Q D ++V ++G + +LV E+ G L L H K ++E +
Sbjct: 57 ANVMQQLDNPYIVRMIGIC---EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 113
Query: 119 FSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
S+ G+ YL N +H D+ N+LL AKISDFGL++ EN +A
Sbjct: 114 VSM------GMKYLEESN--FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 165
Query: 179 GENK 182
K
Sbjct: 166 THGK 169
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 83 PKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
P H++ LV ELM Q ++H + P+ +++ I G+ LH
Sbjct: 104 PAMHKLYLVTELMRTDLAQ--VIHDQRIVISPQHIQY-----FMYHILLGLHVLHEAG-- 154
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAEL 188
V+H D+ P NILL N I DF LAR + N+ +A EL
Sbjct: 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPEL 204
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 426 STPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGS 475
+T GT Y+APE G D D ++ GVL+ ++AGR P + GS
Sbjct: 177 TTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 226
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Query: 17 FSPSRLLGQGGFGSVFHATLH--DQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
F R++G+G + V L D+ A+KV+ + + + + EQ +
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 75 SVLGFSSNPKRH-RMLLVYELMSNGNLQDALLH-KKPPELMEWCKRFSIAVDIAKGIAYL 132
++G S + R+ V E ++ G+L + H ++ +L E RF A +I+ + YL
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSA-EISLALNYL 137
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
H +I+ D+K N+LLD K++D+G+ +
Sbjct: 138 HERG--IIYRDLKLDNVLLDSEGHIKLTDYGMCK 169
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 9/100 (9%)
Query: 90 LVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNI 149
L++E ++N + + +L+ P L ++ R+ I ++ K + Y HS ++H D+KP N+
Sbjct: 105 LIFEYVNNTDFK--VLY---PTLTDYDIRYYI-YELLKALDYCHS--QGIMHRDVKPHNV 156
Query: 150 LLDHNFCA-KISDFGLARLKSVGENQNQADGENKNKAAEL 188
++DH ++ D+GLA G+ N K EL
Sbjct: 157 MIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPEL 196
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ + KG+ Y+H+ +IH D+KP N+ ++ + KI DFGLAR
Sbjct: 133 LVYQMLKGLRYIHAAG--IIHRDLKPGNLAVNEDCELKILDFGLAR 176
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 19/160 (11%)
Query: 14 ADSFSPSRLLGQGGFGSVFHATLH---DQSVAVKVMDSGSLQGEREFYNELYFASLLEQD 70
D + +G G + SV +H + AVK++D + +R+ E+ Q
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQH 75
Query: 71 DHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIA 130
+++++ + K + +V EL G L D +L +K + ++ I K +
Sbjct: 76 PNIITLKDVYDDGKY--VYVVTELXKGGELLDKILRQK---FFSEREASAVLFTITKTVE 130
Query: 131 YLHSLNPPVIHGDIKPSNIL-LDHNF---CAKISDFGLAR 166
YLH+ V+H D+KPSNIL +D + +I DFG A+
Sbjct: 131 YLHAQG--VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
D + ++ G+ TP T +VAPE CD++S GVLL + G P
Sbjct: 163 DFGFAKQLRAENGLLXTPCY--TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI FGLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILGFGLAR 173
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 15 DSFSPSRLLGQGGFGSVF---HATLHD--QSVAVKVMDSGSL----QGEREFYNELYFAS 65
++F ++LG G +G VF + HD + A+KV+ ++ + E
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 66 LLEQDDHVVSV-LGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD 124
+ Q +V++ F + K H L+ + ++ G L L ++ E + + +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLH---LILDYINGGELFTHLSQRE--RFTEHEVQIYVG-E 167
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
I + +LH L +I+ DIK NILLD N ++DFGL++ E + D
Sbjct: 168 IVLALEHLHKLG--IIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYD 219
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 432 GTVCYVAPEYGAGGDI--SEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSE 479
GT+ Y+AP+ GGD + D +S GVL+ L+ G P V G S+
Sbjct: 222 GTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQ 271
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 12/85 (14%)
Query: 88 MLLVYELMSNGNLQDALLHKKPPELMEWCKR---FSIAVDIAKGIAYLHSLNPPVIHGDI 144
++L+ E + G + L PEL E + I +G+ YLH N ++H D+
Sbjct: 104 IILILEYAAGGEIFSLCL----PELAEMVSENDVIRLIKQILEGVYYLHQNN--IVHLDL 157
Query: 145 KPSNILLDHNFC---AKISDFGLAR 166
KP NILL + KI DFG++R
Sbjct: 158 KPQNILLSSIYPLGDIKIVDFGMSR 182
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI D GLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDAGLAR 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G FG+V + V +KV++ S + + + A H+V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIA 130
+LG + LV + + G+L D + + P L+ W V IAKG+
Sbjct: 97 RLLGLCPGSS---LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMY 147
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
YL ++H ++ N+LL +++DFG+A L
Sbjct: 148 YLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADL 182
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI D GLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDRGLAR 173
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 21 RLLGQGGFGSVFHATLHDQS------VAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
++LG G FG+V + V +KV++ S + + + A H+V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 75 SVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKK----PPELMEWCKRFSIAVDIAKGIA 130
+LG + LV + + G+L D + + P L+ W V IAKG+
Sbjct: 79 RLLGLCPGSS---LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMY 129
Query: 131 YLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARL 167
YL ++H ++ N+LL +++DFG+A L
Sbjct: 130 YLEEHG--MVHRNLAARNVLLKSPSQVQVADFGVADL 164
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA++++ GS + N +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 195 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 249
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 250 LA--VQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 291
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 22/166 (13%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDS-----GSLQGEREFYNELYFASLL 67
D + S+ LG G G V A + VA++++ GS + N +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 68 EQDDH--VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELME-WCKRFSIAVD 124
++ +H ++ + F + +V ELM G L D ++ K L E CK + +
Sbjct: 209 KKLNHPCIIKIKNFFDAEDYY---IVLELMEGGELFDKVVGNK--RLKEATCKLYFYQML 263
Query: 125 IAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARL 167
+A + YLH +IH D+KP N+LL + + KI+DFG +++
Sbjct: 264 LA--VQYLHE--NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 305
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 18/153 (11%)
Query: 23 LGQGGFGSVFHA--TLHDQSVAVKVMDS--GSLQGEREFYNELYFASLLEQDDHVVSVLG 78
+G G +GSV A T VAVK + S+ + Y EL ++ ++ V+ +L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN-VIGLLD 88
Query: 79 FSSNPKR-----HRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLH 133
+ P R + + LV LM +L + + K +L + +F I I +G+ Y+H
Sbjct: 89 VFT-PARSLEEFNDVYLVTHLMG-ADLNNIV---KCQKLTDDHVQFLI-YQILRGLKYIH 142
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
S + +IH D+KPSN+ ++ + KI D GLAR
Sbjct: 143 SAD--IIHRDLKPSNLAVNEDCELKILDGGLAR 173
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 16 SFSPSRLLGQGGFGSVF--HATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHV 73
+F +LG G F VF L + A+K + + NE+ ++ ++ V
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIV 69
Query: 74 VSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVD-IAKGIAYL 132
+ S + LV +L+S G L D +L + + K S+ + + + YL
Sbjct: 70 TLEDIYESTTHYY---LVMQLVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYL 122
Query: 133 HSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLARLKSVG 171
H ++H D+KP N+L + N I+DFGL++++ G
Sbjct: 123 H--ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 420 KSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
+ G+ ST GT YVAPE A S+ D +S GV+ +L+ G P
Sbjct: 159 EQNGIMSTAC--GTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 121 IAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
I + K + +L N +IH DIKPSNILLD + K+ DFG++
Sbjct: 130 ITLATVKALNHLKE-NLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
Query: 87 RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV-DIAKGIAYLHSLNPPVIHGDIK 145
R LV+E M G++ + ++ +E S+ V D+A + +LH N + H D+K
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEA----SVVVQDVASALDFLH--NKGIAHRDLK 138
Query: 146 PSNILLDH-NFCA--KISDFGLA 165
P NIL +H N + KI DFGL
Sbjct: 139 PENILCEHPNQVSPVKICDFGLG 161
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 426 STPSMR---GTVCYVAPE----YGAGGDISEK-CDVYSYGVLLLVLIAGRRPL 470
STP + G+ Y+APE + I +K CD++S GV+L +L++G P
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDH--VVSVLG 78
+G+G +G V+ A D + + L E E + SLL++ H +VS++
Sbjct: 29 VGEGTYGVVYKAK--DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + + LV+E M +L+ L K K + + +G+A+ H
Sbjct: 87 VIHSERC--LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQHR-- 139
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLAR 166
++H D+KP N+L++ + K++DFGLAR
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 13/148 (8%)
Query: 23 LGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFY--NELYFASLLEQDDH--VVSVLG 78
+G+G +G V+ A D + + L E E + SLL++ H +VS++
Sbjct: 29 VGEGTYGVVYKAK--DSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
+ + + LV+E M +L+ L K K + + +G+A+ H
Sbjct: 87 VIHSERC--LTLVFEFMEK-DLKKVLDENKTGLQDSQIKIY--LYQLLRGVAHCHQHR-- 139
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLAR 166
++H D+KP N+L++ + K++DFGLAR
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 118 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 171
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 172 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 207
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 33/126 (26%)
Query: 429 SMRGTVCYVAPEYGAGGDISE-------------KCDVYSYGVLLLVLIAGRRPLQVTGS 475
S GTV Y+ PE A D+S K DV+S G +L + G+ P Q
Sbjct: 215 SQVGTVNYMPPE--AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---- 268
Query: 476 PMSEFQRANLMSWARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPS 535
Q N +S + IE D + D + L C CL++ P R S
Sbjct: 269 -----QIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRIS 314
Query: 536 MEEVVG 541
+ E++
Sbjct: 315 IPELLA 320
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNEL-----YFAS 65
A + +++G+G FG V A H Q VA+K+ ++ E+ F+ +
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKM-----VRNEKRFHRQAAEEIRILEH 149
Query: 66 LLEQD-DHVVSVLGFSSN-PKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
L +QD D+ ++V+ N R+ + + +EL+S NL + + K + ++F A
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--A 206
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCA--KISDFG 163
I + + LH +IH D+KP NILL + K+ DFG
Sbjct: 207 HSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 124 DIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFG-LARLKSVGENQNQADGENK 182
D +A+LHS ++H D+KP+NI L K+ DFG L L + G + Q +G+ +
Sbjct: 165 DTLLALAHLHSQG--LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQ-EGDPR 221
Query: 183 NKAAEL 188
A EL
Sbjct: 222 YMAPEL 227
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 118 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 171
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 172 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 118 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 171
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 172 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 207
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 33/126 (26%)
Query: 429 SMRGTVCYVAPEYGAGGDISE-------------KCDVYSYGVLLLVLIAGRRPLQVTGS 475
S GTV Y+ PE A D+S K DV+S G +L + G+ P Q
Sbjct: 215 SQVGTVNYMPPE--AIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ---- 268
Query: 476 PMSEFQRANLMSWARHLARNGKLIELVDQAVVKSLDREQALLCITVALLCLQKSPALRPS 535
Q N +S + IE D + D + L C CL++ P R S
Sbjct: 269 -----QIINQISKLHAIIDPNHEIEFPD---IPEKDLQDVLKC------CLKRDPKQRIS 314
Query: 536 MEEVVG 541
+ E++
Sbjct: 315 IPELLA 320
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNEL-----YFAS 65
A + +++G+G FG V A H Q VA+K+ ++ E+ F+ +
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKM-----VRNEKRFHRQAAEEIRILEH 149
Query: 66 LLEQD-DHVVSVLGFSSN-PKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
L +QD D+ ++V+ N R+ + + +EL+S NL + + K + ++F A
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--A 206
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCA--KISDFG 163
I + + LH +IH D+KP NILL + K+ DFG
Sbjct: 207 HSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 71/182 (39%), Gaps = 54/182 (29%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE-- 68
R F+ +LG+G FG V + ER+ +ELY +L+
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKV-------------------MLSERKGTDELYAVKILKKD 377
Query: 69 ---QDDHVVS------VLGFSSNP-----------KRHRMLLVYELMSNGNL----QDAL 104
QDD V VL P R+ V E ++ G+L Q
Sbjct: 378 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG 437
Query: 105 LHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGL 164
K+P + A +IA G+ +L S +I+ D+K N++LD KI+DFG+
Sbjct: 438 RFKEPHAVF-------YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGM 488
Query: 165 AR 166
+
Sbjct: 489 CK 490
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 423 GVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
GVT T GT Y+APE A + D +++GVLL ++AG+ P +
Sbjct: 496 GVT-TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARLKSVGEN 173
V+H D+KP+N+ LD K+ DFGLAR+ + E+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED 171
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 70 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 123
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 124 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 159
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 13 AADSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGEREFYNEL-----YFAS 65
A + +++G+G FG V A H Q VA+K+ ++ E+ F+ +
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKM-----VRNEKRFHRQAAEEIRILEH 149
Query: 66 LLEQD-DHVVSVLGFSSN-PKRHRMLLVYELMSNGNLQDALLHKKPPEL-MEWCKRFSIA 122
L +QD D+ ++V+ N R+ + + +EL+S NL + + K + ++F A
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKF--A 206
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCA--KISDFG 163
I + + LH +IH D+KP NILL + K+ DFG
Sbjct: 207 HSILQCLDALHKNR--IIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 12 RAADSFSPSRLLGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQ 69
R + F R +G G FG ++ T ++ VA+K+ + + + + +++Y +L+
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIY--RILQG 61
Query: 70 DDHVVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKR-------FSIA 122
+ +V F + +LV +L+ +L+D L +C R +A
Sbjct: 62 GTGIPNVRWFGVEGDYN--VLVMDLLGP-SLED---------LFNFCSRKLSLKTVLMLA 109
Query: 123 VDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAK---ISDFGLA-RLKSVGENQNQAD 178
+ + ++HS + +H DIKP N L+ A I DFGLA + + +Q+
Sbjct: 110 DQMINRVEFVHSKS--FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPY 167
Query: 179 GENKN 183
ENKN
Sbjct: 168 RENKN 172
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARL 167
V+H D+KP+N+ LD K+ DFGLAR+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 139 VIHGDIKPSNILLDHNFCAKISDFGLARL 167
V+H D+KP+N+ LD K+ DFGLAR+
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARI 165
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 126
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 181
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 182 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 71 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 124
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 125 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 160
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 90 LVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPS 147
+ E M G+L D +L K + PE + + SIAV KG+ YL ++H D+KPS
Sbjct: 100 ICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTYLRE-KHKIMHRDVKPS 153
Query: 148 NILLDHNFCAKISDFGLA 165
NIL++ K+ DFG++
Sbjct: 154 NILVNSRGEIKLCDFGVS 171
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 411 DSAASGEIPKSGGVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
D SG++ S S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 167 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 222
Query: 471 QVTGSPMSEFQ 481
M+ F+
Sbjct: 223 GSGSGSMAIFE 233
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 91
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 146
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 147 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 16/159 (10%)
Query: 23 LGQGGFGSVFHAT--LHDQSVAVKVMDSGSLQG--EREFYNELYFASLLEQDDHVVSVLG 78
LG+G F V L Q A K++++ L ++ E LL+ + +V +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN-IVRLHD 88
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPP 138
S H L+++L++ G L + ++ + E I + + + H +
Sbjct: 89 SISEEGHH--YLIFDLVTGGELFEDIVAR---EYYSEADASHCIQQILEAVLHCHQMG-- 141
Query: 139 VIHGDIKPSNILLDHNF---CAKISDFGLARLKSVGENQ 174
V+H D+KP N+LL K++DFGLA ++ GE Q
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQ 179
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 70/151 (46%), Gaps = 21/151 (13%)
Query: 23 LGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G FG V+ A + A KV+++ S E E + + +L DH +V +LG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLG 83
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHK----KPPELMEWCKRFSIAVDIAKGIAYLHS 134
+ + + ++ E G + +L P++ C++ + + + +LHS
Sbjct: 84 AYYHDGK--LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ------MLEALNFLHS 135
Query: 135 LNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
+IH D+K N+L+ +++DFG++
Sbjct: 136 KR--IIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 74 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 127
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 128 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 163
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 28/168 (16%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHD--QSVAVKVMDSGSLQGE-----REFYNELYFASLL 67
D + ++G+G F V + Q AVK++D + E +L
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 68 EQDDHVVSVL-GFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV--- 123
+ H+V +L +SS+ + +V+E M +L ++ + + +S AV
Sbjct: 84 KHP-HIVELLETYSSDGM---LYMVFEFMDGADLCFEIVKRADAGFV-----YSEAVASH 134
Query: 124 ---DIAKGIAYLHSLNPPVIHGDIKPSNILL---DHNFCAKISDFGLA 165
I + + Y H N +IH D+KP N+LL +++ K+ DFG+A
Sbjct: 135 YMRQILEALRYCHDNN--IIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 77/176 (43%), Gaps = 20/176 (11%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 90 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 143
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQADGENKNKAAEL 188
H ++H D+KP+N L+ K+ DFG+A NQ Q D + K +++
Sbjct: 144 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPDTTSVVKDSQV 189
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 72/152 (47%), Gaps = 23/152 (15%)
Query: 23 LGQGGFGSVFHATLHDQSV--AVKVMDSGSLQGEREFYNELYFASLLEQDDH--VVSVLG 78
LG G FG V+ A + A KV+++ S E E + + +L DH +V +LG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEILATCDHPYIVKLLG 75
Query: 79 FSSNPKRHRMLLVYELMSNGNLQDALLHK-----KPPELMEWCKRFSIAVDIAKGIAYLH 133
+ + +++ + G DA++ + P++ C++ + + + +LH
Sbjct: 76 AYYHDGKLWIMIEF---CPGGAVDAIMLELDRGLTEPQIQVVCRQ------MLEALNFLH 126
Query: 134 SLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
S +IH D+K N+L+ +++DFG++
Sbjct: 127 SKR--IIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 71/182 (39%), Gaps = 54/182 (29%)
Query: 11 RRAADSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLE-- 68
R F+ +LG+G FG V + ER+ +ELY +L+
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKV-------------------MLSERKGTDELYAVKILKKD 56
Query: 69 ---QDDHVVS------VLGFSSNP-----------KRHRMLLVYELMSNGNL----QDAL 104
QDD V VL P R+ V E ++ G+L Q
Sbjct: 57 VVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG 116
Query: 105 LHKKPPELMEWCKRFSIAVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGL 164
K+P + A +IA G+ +L S +I+ D+K N++LD KI+DFG+
Sbjct: 117 RFKEPHAVF-------YAAEIAIGLFFLQSKG--IIYRDLKLDNVMLDSEGHIKIADFGM 167
Query: 165 AR 166
+
Sbjct: 168 CK 169
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 423 GVTSTPSMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQ 471
GVT T GT Y+APE A + D +++GVLL ++AG+ P +
Sbjct: 175 GVT-TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 20/166 (12%)
Query: 17 FSPSRLLGQGGFGSVFHATLHDQSV-AVKV--MDSGSLQGEREFYNEL-YFASLLEQDDH 72
+S + +G GG VF + + A+K ++ Q + NE+ Y L + D
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 73 VVSVLGFSSNPKRHRMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAVDIAKGIAYL 132
++ + + + +Y +M GN+ KK + W +R S ++ + + +
Sbjct: 90 IIRLYDYEITDQ-----YIYMVMECGNIDLNSWLKKKKSIDPW-ERKSYWKNMLEAVHTI 143
Query: 133 HSLNPPVIHGDIKPSNILLDHNFCAKISDFGLARLKSVGENQNQAD 178
H ++H D+KP+N L+ K+ DFG+A NQ Q D
Sbjct: 144 HQHG--IVHSDLKPANFLIVDGML-KLIDFGIA-------NQMQPD 179
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 119
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 122
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 123 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 155
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 432 GTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQ 481
GT Y++PE G S + D++S G+ L+ + GR P PM+ F+
Sbjct: 168 GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP----RPPMAIFE 213
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 22 LLGQGGFGSVFHA-TLHDQ-SVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVVSVLGF 79
+LG+G +G V+ L +Q +A+K + + + + E+ L+ + V + F
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 80 SSNPKRHRMLLVYELMSNGNLQDALLHKK--PPELMEWCKRFSIAVDIAKGIAYLHSLNP 137
S N + + E + G+L ALL K P + E F I +G+ YLH +
Sbjct: 89 SEN---GFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTK-QILEGLKYLH--DN 141
Query: 138 PVIHGDIKPSNILLD-HNFCAKISDFGLAR 166
++H DIK N+L++ ++ KISDFG ++
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 427 TPSMRGTVCYVAPEYGAGG--DISEKCDVYSYGVLLLVLIAGRRPLQVTGSPMSEFQRAN 484
T + GT+ Y+APE G + D++S G ++ + G+ P G P + +
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 239
Query: 485 LM 486
+
Sbjct: 240 MF 241
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 119
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 119
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 119
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 204 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 206 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 248
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 199 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 241
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 122 AVDIAKGIAYLHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLAR 166
+ +AKG+ +L S IH D+ NILL KI DFGLAR
Sbjct: 197 SFQVAKGMEFLASRK--CIHRDLAARNILLSEKNVVKICDFGLAR 239
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 72/154 (46%), Gaps = 10/154 (6%)
Query: 15 DSFSPSRLLGQGGFGSVFHATLHDQSVAVKVMDSGSLQGEREFYNELYFASLLEQDDHVV 74
D F LG G G VF + H S V L+ + N++ + + +
Sbjct: 6 DDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 75 SVLGF-SSNPKRHRMLLVYELMSNGNLQDALLHK--KPPELMEWCKRFSIAVDIAKGIAY 131
++GF + + + E M G+L D +L K + PE + + SIAV KG+ Y
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPE--QILGKVSIAV--IKGLTY 119
Query: 132 LHSLNPPVIHGDIKPSNILLDHNFCAKISDFGLA 165
L + ++H D+KPSNIL++ K+ DFG++
Sbjct: 120 LREKHK-IMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 429 SMRGTVCYVAPEYGAGGDISEKCDVYSYGVLLLVLIAGRRPL 470
S GT Y++PE G S + D++S G+ L+ + GR P+
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 10/82 (12%)
Query: 87 RMLLVYELMSNGNLQDALLHKKPPELMEWCKRFSIAV-DIAKGIAYLHSLNPPVIHGDIK 145
R LV+E M G++ + ++ +E S+ V D+A + +LH N + H D+K
Sbjct: 85 RFYLVFEKMRGGSILSHIHKRRHFNELEA----SVVVQDVASALDFLH--NKGIAHRDLK 138
Query: 146 PSNILLDH-NFCA--KISDFGL 164
P NIL +H N + KI DF L
Sbjct: 139 PENILCEHPNQVSPVKICDFDL 160
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 426 STPSMR---GTVCYVAPE----YGAGGDISEK-CDVYSYGVLLLVLIAGRRPL 470
STP + G+ Y+APE + I +K CD++S GV+L +L++G P
Sbjct: 174 STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,255,311
Number of Sequences: 62578
Number of extensions: 570800
Number of successful extensions: 3304
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 267
Number of HSP's that attempted gapping in prelim test: 1496
Number of HSP's gapped (non-prelim): 1800
length of query: 576
length of database: 14,973,337
effective HSP length: 104
effective length of query: 472
effective length of database: 8,465,225
effective search space: 3995586200
effective search space used: 3995586200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)