BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036419
(754 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/290 (36%), Positives = 158/290 (54%), Gaps = 23/290 (7%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYKS-----------------GQGLE-EFKNEIKL 491
SL + A++NF +N LG GGFG VYK QG E +F+ E+++
Sbjct: 29 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVEM 88
Query: 492 TAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK-EGLLGWGARIRIIEGI 550
+ HRNL+RL G C+ E +L+Y Y+ N S+ S L + + + L W R RI G
Sbjct: 89 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 148
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A+GL YLH + ++IHRD+K +NILLD + DFGLA++ + + GT
Sbjct: 149 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGTI 207
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRS---TRFFNTNSLTLLGHAWNLWKDD 667
G+++PEY G S K+DVF +GV+LLE ++ +R+ R N + + LL L K+
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 668 RSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ L+D LQ V++ I VALLC Q + +RP MSEV+ ML +
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 317
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/290 (36%), Positives = 157/290 (54%), Gaps = 23/290 (7%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYKS-----------------GQGLE-EFKNEIKL 491
SL + A++NF +N LG GGFG VYK QG E +F+ E+++
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEM 80
Query: 492 TAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK-EGLLGWGARIRIIEGI 550
+ HRNL+RL G C+ E +L+Y Y+ N S+ S L + + + L W R RI G
Sbjct: 81 ISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGS 140
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A+GL YLH + ++IHRD+K +NILLD + DFGLA++ + + G
Sbjct: 141 ARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VRGXI 199
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRS---TRFFNTNSLTLLGHAWNLWKDD 667
G+++PEY G S K+DVF +GV+LLE ++ +R+ R N + + LL L K+
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 668 RSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ L+D LQ V++ I VALLC Q + +RP MSEV+ ML +
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 26/282 (9%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTA 493
L + ATNNF + +G G FG VYK S QG+EEF+ EI+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 494 KLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQ 552
+H +LV L+G C E+ E +LIY+Y+ N +L L+ + + + W R+ I G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL-QSNTKRIV-GTY 610
GL YLH + +IHRD+K NILLD N +PKI+DFG+++ G EL Q++ +V GT
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELDQTHLXXVVKGTL 205
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRS-TRFFNTNSLTLLGHAWNLWKDDRS 669
GY+ PEY I G + KSDV+SFGV+L E L ++ + + + L A + +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 670 WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
+++DP L + ++++ + A+ C+ ++ DRP+M +V+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 26/282 (9%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTA 493
L + ATNNF + +G G FG VYK S QG+EEF+ EI+ +
Sbjct: 31 LVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLS 90
Query: 494 KLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQ 552
+H +LV L+G C E+ E +LIY+Y+ N +L L+ + + + W R+ I G A+
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL-QSNTKRIV-GTY 610
GL YLH + +IHRD+K NILLD N +PKI+DFG+++ G EL Q++ +V GT
Sbjct: 151 GLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISK--KGTELGQTHLXXVVKGTL 205
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRS-TRFFNTNSLTLLGHAWNLWKDDRS 669
GY+ PEY I G + KSDV+SFGV+L E L ++ + + + L A + +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 670 WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
+++DP L + ++++ + A+ C+ ++ DRP+M +V+
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 443 ETKTQGKSLASVSAATNNFGVE------NKLGEGGFGPVYK------------------- 477
+T+ S + TNNF NK+GEGGFG VYK
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 68
Query: 478 -SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ + ++F EIK+ AK QH NLV LLG + + L+Y Y+PN SL L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L W R +I +G A G+ +LH+ IHRD+K +NILLD KISDFGLAR
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL 656
RIVGT YM+PE A+ G + KSD++SFGV+LLE ++ + L L
Sbjct: 186 FAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 657 LGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
++ + +D K+ +A V+ +VA C+ E RP + +V +L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 443 ETKTQGKSLASVSAATNNFGVE------NKLGEGGFGPVYK------------------- 477
+T+ S + TNNF NK+GEGGFG VYK
Sbjct: 9 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 68
Query: 478 -SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ + ++F EIK+ AK QH NLV LLG + + L+Y Y+PN SL L
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L W R +I +G A G+ +LH+ IHRD+K +NILLD KISDFGLAR
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL 656
RIVGT YM+PE A+ G + KSD++SFGV+LLE ++ + L L
Sbjct: 186 FAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 657 LGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
++ + +D K+ +A V+ +VA C+ E RP + +V +L
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 143/298 (47%), Gaps = 31/298 (10%)
Query: 443 ETKTQGKSLASVSAATNNFGVE------NKLGEGGFGPVYK------------------- 477
+T+ S + TNNF NK+GEGGFG VYK
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDI 62
Query: 478 -SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ + ++F EIK+ AK QH NLV LLG + + L+Y Y+PN SL L
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L W R +I +G A G+ +LH+ IHRD+K +NILLD KISDFGLAR
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL 656
RIVGT YM+PE A+ G + KSD++SFGV+LLE ++ + L L
Sbjct: 180 FAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 657 LGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
++ + +D K+ +A V+ +VA C+ E RP + +V +L
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMN-DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/297 (34%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 444 TKTQGKSLASVSAATNNFGVE------NKLGEGGFGPVYK-------------------- 477
T+ S + TNNF NK GEGGFG VYK
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT 60
Query: 478 SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
+ + ++F EIK+ AK QH NLV LLG + + L+Y Y PN SL L
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP 120
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
L W R +I +G A G+ +LH+ IHRD+K +NILLD KISDFGLAR
Sbjct: 121 LSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
RIVGT Y +PE A+ G + KSD++SFGV+LLE ++ + L L
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 236
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
++ + +D K +A V+ +VA C+ E RP + +V +L
Sbjct: 237 IKEEIEDEEKTIEDYIDKKXN-DADSTSVEAXYSVASQCLHEKKNKRPDIKKVQQLL 292
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 42/216 (19%)
Query: 463 VENKLGEGGFGPVYKS--------------------GQGLEEFKNEIKLTAKLQHRNLVR 502
+E +G GGFG VY++ Q +E + E KL A L+H N++
Sbjct: 11 LEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFD--TTKEGLLGWGARIRIIEGIAQGLLYLHQY 560
L G C+++ L+ E+ L+ L + L+ W +I A+G+ YLH
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI------ARGMNYLHDE 124
Query: 561 SRLRVIHRDLKPSNILL--------DSNMIPKISDFGLARMFGGDELQSNTKR-IVGTYG 611
+ + +IHRDLK SNIL+ SN I KI+DFGLAR E TK G Y
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYA 179
Query: 612 YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTR 647
+M+PE FS SDV+S+GVLL E L+ + R
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFR 215
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 113/238 (47%), Gaps = 30/238 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+F E ++ KL H LV+L G C+EQ L++E++ + L +L T+ GL
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 104
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + S VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 105 LLGMCLDVCEGMAYLEEAS---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH 659
T GT + SPE +S KSDV+SFGVL+ E S + +NS +
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV--- 214
Query: 660 AWNLWKDDRS--WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+D S + L P+L Y I+ C +E DRP S ++ L
Sbjct: 215 ------EDISTGFRLYKPRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLA 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++I EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 147/306 (48%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++I EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE---XTA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 230 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAA 287
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 288 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGA 341
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 394
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 395 ERGYRMPCPP-ECPESLH------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
Query: 727 PG 728
PG
Sbjct: 448 PG 449
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 230 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAA 287
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 288 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGA 341
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 394
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 395 ERGYRMPCPP-ECPESLH------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 447
Query: 727 PG 728
PG
Sbjct: 448 PG 449
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 253 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 312
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 313 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAA 370
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 371 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGA 424
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 425 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 477
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 478 ERGYRMPCPP-ECPES------LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 530
Query: 727 PG 728
PG
Sbjct: 531 PG 532
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 170 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 229
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 230 AQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFLKGETGK-YLRLPQLVDMAA 287
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 288 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGA 341
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 342 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 394
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 395 ERGYRMPCPP-ECPESLH------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
Query: 727 PG 728
PG
Sbjct: 448 PG 449
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 112/239 (46%), Gaps = 30/239 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+F E ++ KL H LV+L G C+EQ L++E++ + L +L T+ GL
Sbjct: 50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 107
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 108 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 164
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH 659
T GT + SPE +S KSDV+SFGVL+ E S + +NS +
Sbjct: 165 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV--- 217
Query: 660 AWNLWKDDRS--WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+D S + L P+L Y I+ C +E DRP S ++ L
Sbjct: 218 ------EDISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 263
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 30/239 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+F E ++ KL H LV+L G C+EQ L++E++ + L +L T+ GL
Sbjct: 47 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 104
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 105 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 161
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL--L 657
T GT + SPE +S KSDV+SFGVL+ E S + +NS + +
Sbjct: 162 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ L+K P+L Y I+ C +E DRP S ++ L
Sbjct: 218 STGFRLYK---------PRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 260
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 146/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 30/239 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+F E ++ KL H LV+L G C+EQ L++E++ + L +L T+ GL
Sbjct: 45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 102
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 103 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 159
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL--L 657
T GT + SPE +S KSDV+SFGVL+ E S + +NS + +
Sbjct: 160 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ L+K P+L Y I+ C +E DRP S ++ L
Sbjct: 216 STGFRLYK---------PRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 258
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ K++H LV+L E+ ++ EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 171 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQE 230
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ SL FL +G +G R +
Sbjct: 231 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLV 284
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGL R+ +E T
Sbjct: 285 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY---TA 338
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 339 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 395
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 396 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 444
Query: 723 SPQQPG 728
QPG
Sbjct: 445 PQXQPG 450
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 60
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 61 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSA 118
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 119 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW---TARQGA 172
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 225
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 226 ERGYRMPCPP-ECPESLH------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 278
Query: 727 PG 728
PG
Sbjct: 279 PG 280
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 1 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 60
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ KL+H LV+L E+ ++ EY+ SL FL T + L + +
Sbjct: 61 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFLKGETGK-YLRLPQLVDMSA 118
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R
Sbjct: 119 QIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGA 172
Query: 609 TY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKD 666
+ + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 173 KFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ 225
Query: 667 DRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQ 726
+R + + P +C S ++ C ++ +RPT + + L + F + Q
Sbjct: 226 ERGYRMPCPP-ECPESLH------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 278
Query: 727 PG 728
PG
Sbjct: 279 PG 280
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGLAR+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ L FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 145/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ SL FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 145/306 (47%), Gaps = 48/306 (15%)
Query: 445 KTQGKSLASVSAATNNFGVENKLGEGGFGPVY---------------KSG-QGLEEFKNE 488
+TQG + + + +E KLG+G FG V+ K G E F E
Sbjct: 4 QTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQE 63
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----I 544
++ KL+H LV+L E+ ++ EY+ L FL +G +G R +
Sbjct: 64 AQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFL-----KGEMGKYLRLPQLV 117
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ Y+ R+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T
Sbjct: 118 DMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TA 171
Query: 605 RIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + + +PE A++G F+IKSDV+SFG+LL E L++K + + +L
Sbjct: 172 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV-- 228
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+R + + P +C S ++ C +++ +RPT + + L + F +
Sbjct: 229 ----ERGYRMPCPP-ECPESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTE 277
Query: 723 SPQQPG 728
QPG
Sbjct: 278 PQYQPG 283
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 112/239 (46%), Gaps = 30/239 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
++F E ++ KL H LV+L G C+EQ L++E++ + L +L T+ GL
Sbjct: 67 DDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAET 124
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 125 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 181
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL--L 657
T GT + SPE +S KSDV+SFGVL+ E S + +NS + +
Sbjct: 182 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ L+K P+L Y I+ C +E DRP S ++ L
Sbjct: 238 STGFRLYK---------PRLASTHVYQIMNH-------CWKERPEDRPAFSRLLRQLAE 280
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 27 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 85
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 86 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 140
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 198 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 250
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ LC +E DRPT + S+L + F QP
Sbjct: 251 MR-------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 285
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 111/239 (46%), Gaps = 30/239 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+F E ++ KL H LV+L G C+EQ L+ E++ + L +L T+ GL
Sbjct: 48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAET 105
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + +G+ YL + VIHRDL N L+ N + K+SDFG+ R D+ S+
Sbjct: 106 LLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH 659
T GT + SPE +S KSDV+SFGVL+ E S + +NS +
Sbjct: 163 T----GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV--- 215
Query: 660 AWNLWKDDRS--WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+D S + L P+L Y I+ C +E DRP S ++ L
Sbjct: 216 ------EDISTGFRLYKPRLASTHVYQIMNH-------CWRERPEDRPAFSRLLRQLAE 261
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 77
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 242
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ LC +E DRPT + S+L + F QP
Sbjct: 243 MR-------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 277
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 29 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 87
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 88 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 142
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 199
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 200 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 252
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ LC +E DRPT + S+L + F QP
Sbjct: 253 MR-------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 287
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 83
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 84 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 248
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ LC +E DRPT + S+L + F QP
Sbjct: 249 MR-------LCWKERPEDRPTFDYLRSVLEDFFTATEGQYQP 283
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 463 VENKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGC 506
+E KLG+G FG V+ K G E F E ++ KL+H LV+L
Sbjct: 12 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 71
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVI 566
E+ + + EY+ SL FL T + L + + IA G+ Y+ R+ +
Sbjct: 72 VSEEPIXI-VTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYV 126
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFS 624
HRDL+ +NIL+ N++ K++DFGLAR+ +E T R + + +PE A++G F+
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRFT 183
Query: 625 IKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYP 684
IKSDV+SFG+LL E L++K + + +L +R + + P +C S
Sbjct: 184 IKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPP-ECPESLH 235
Query: 685 IVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPG 728
++ C ++ +RPT + + L + F + QPG
Sbjct: 236 ------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 273
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 40/284 (14%)
Query: 463 VENKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGC 506
+E KLG+G FG V+ K G E F E ++ KL+H LV+L
Sbjct: 15 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 74
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVI 566
E+ ++ EY+ SL FL T + L + + IA G+ Y+ R+ +
Sbjct: 75 VSEE-PIYIVTEYMSKGSLLDFLKGETGK-YLRLPQLVDMAAQIASGMAYVE---RMNYV 129
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFS 624
HRDL+ +NIL+ N++ K++DFGLAR+ +E T R + + +PE A++G F+
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALYGRFT 186
Query: 625 IKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYP 684
IKSDV+SFG+LL E L++K + + +L +R + + P +C S
Sbjct: 187 IKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPP-ECPESLH 238
Query: 685 IVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPG 728
++ C ++ +RPT + + L + F + QPG
Sbjct: 239 ------DLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQPG 276
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 132/282 (46%), Gaps = 40/282 (14%)
Query: 465 NKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ K G E F E ++ KL+H LV+L
Sbjct: 15 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHR 568
E+ ++ EY+ SL FL D L + + +A G+ Y+ R+ IHR
Sbjct: 75 EE-PIYIVTEYMNKGSLLDFLKDGEGRAL-KLPNLVDMAAQVAAGMAYIE---RMNYIHR 129
Query: 569 DLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSIK 626
DL+ +NIL+ + +I KI+DFGLAR+ +E T R + + +PE A++G F+IK
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNE---XTARQGAKFPIKWTAPEAALYGRFTIK 186
Query: 627 SDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIV 686
SDV+SFG+LL E L +K + N+ +L +R + ++ C PI
Sbjct: 187 SDVWSFGILLTE-LVTKGRVPYPGMNNREVLEQV------ERGY-----RMPCPQDCPIS 234
Query: 687 KRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPG 728
+ + C +++ +RPT + S L + F QPG
Sbjct: 235 LHELMIH--CWKKDPEERPTFEYLQSFLEDYFTATEPQYQPG 274
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 28/264 (10%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 137
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 138 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 194
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + SPE + F+ SDV+S+G++L E +S + +N +
Sbjct: 195 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV--- 251
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
D + L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 252 ----DEGYRL-PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN-- 298
Query: 723 SPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 299 ----PG--SLKIITSAAARPSNLL 316
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 147
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSN 602
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D E
Sbjct: 148 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 204
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
T+ + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 205 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 264
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 265 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 309 ------PG--SLKIITSAAARPSNLL 326
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 48/288 (16%)
Query: 463 VENKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGC 506
+E KLG+G FG V+ K G E F E ++ KL+H LV+L
Sbjct: 11 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 70
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----IRIIEGIAQGLLYLHQYSR 562
E+ ++ EY+ SL FL +G +G R + + IA G+ Y+ R
Sbjct: 71 VSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVE---R 121
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIH 620
+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R + + +PE A++
Sbjct: 122 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALY 178
Query: 621 GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCE 680
G F+IKSDV+SFG+LL E L++K + + +L +R + + P +C
Sbjct: 179 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPP-ECP 230
Query: 681 ASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPG 728
S ++ C +++ +RPT + + L + F + QPG
Sbjct: 231 ESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 272
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 48/288 (16%)
Query: 463 VENKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGC 506
+E KLG+G FG V+ K G E F E ++ KL+H LV+L
Sbjct: 13 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAV 72
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR----IRIIEGIAQGLLYLHQYSR 562
E+ ++ EY+ SL FL +G +G R + + IA G+ Y+ R
Sbjct: 73 VSEE-PIYIVTEYMSKGSLLDFL-----KGEMGKYLRLPQLVDMAAQIASGMAYVE---R 123
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIH 620
+ +HRDL+ +NIL+ N++ K++DFGLAR+ +E T R + + +PE A++
Sbjct: 124 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY---TARQGAKFPIKWTAPEAALY 180
Query: 621 GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCE 680
G F+IKSDV+SFG+LL E L++K + + +L +R + + P +C
Sbjct: 181 GRFTIKSDVWSFGILLTE-LTTKGRVPYPGMVNREVLDQV------ERGYRMPCPP-ECP 232
Query: 681 ASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPG 728
S ++ C +++ +RPT + + L + F + QPG
Sbjct: 233 ESLH------DLMCQCWRKDPEERPTFEYLQAFLEDYFTSTEPQYQPG 274
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 120
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSN 602
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D E
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
T+ + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 238 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 282 ------PG--SLKIITSAAARPSNLL 299
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 132/282 (46%), Gaps = 42/282 (14%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 28 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLY-AVV 86
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 87 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 141
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 199 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 251
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ LC +E DRPT + S+L + F QP
Sbjct: 252 MR-------LCWKERPEDRPTFDYLRSVLEDFFTATEGQFQP 286
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 124/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ EY+ N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 25 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 83
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 84 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 138
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 195
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 196 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 248
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 249 MR-------LCWKERPEDRPTFDYLRSVLEDFF 274
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 24 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 82
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 83 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 137
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 194
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 195 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 247
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 248 MR-------LCWKERPEDRPTFDYLRSVLEDFF 273
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 242
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 243 MR-------LCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 20 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 78
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 79 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 133
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 191 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 243
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 244 MR-------LCWKERPEDRPTFDYLRSVLEDFF 269
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 21 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 79
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 80 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 134
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNE---XTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 192 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 244
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 245 MR-------LCWKERPEDRPTFDYLRSVLEDFF 270
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 26/246 (10%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGAR 543
F E L +LQH+ LVRL V Q +I EY+ N SL FL T G+ L
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKL 111
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ + IA+G+ ++ + + IHRDL+ +NIL+ + KI+DFGLAR+ E T
Sbjct: 112 LDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDAE---XT 165
Query: 604 KRIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAW 661
R + + +PE +G F+IKSDV+SFG+LL E ++ R TN +
Sbjct: 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ---- 221
Query: 662 NLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNL 721
NL +R + ++ P E Y +++ LC +E DRPT + S+L + F
Sbjct: 222 NL---ERGYRMVRPDNCPEELYQLMR-------LCWKERPEDRPTFDYLRSVLEDFFTAT 271
Query: 722 PSPQQP 727
QP
Sbjct: 272 EGQYQP 277
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 19 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 77
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 78 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 132
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 189
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 242
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 243 MR-------LCWKERPEDRPTFDYLRSVLEDFF 268
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 14 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 72
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 73 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 127
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
RDL+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 184
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 185 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 237
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 238 MR-------LCWKERPEDRPTFDYLRSVLEDFF 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ E + N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSN 602
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D E
Sbjct: 150 VGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
T+ + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ E + N SLDSFL +
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQL 149
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 150 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 206
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 207 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 266
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 267 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 311 ------PG--SLKIITSAAARPSNLL 328
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 32/266 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++RL G + +++ E + N SLDSFL +
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL--RKHDAQFTVIQL 120
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 121 VGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 177
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS--SKRSTRFFNTNSLTLLGHA 660
R + SPE + F+ SDV+S+G++L E +S + N + + +
Sbjct: 178 TRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEG 237
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
+ L P + C A+ + L C Q++ +RP +++S+L N
Sbjct: 238 YRL----------PPPMDCPAA------LYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
Query: 721 LPSPQQPGFSSLKKSVETVARSMNRL 746
PG SLK AR N L
Sbjct: 282 ------PG--SLKIITSAAARPSNLL 299
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 130/273 (47%), Gaps = 42/273 (15%)
Query: 465 NKLGEGGFGPVY----------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ + + F E L +LQH+ LVRL V
Sbjct: 15 ERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV-V 73
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGL-LGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
Q +I EY+ N SL FL T G+ L + + IA+G+ ++ + + IH
Sbjct: 74 TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIH 128
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSI 625
R+L+ +NIL+ + KI+DFGLAR+ +E T R + + +PE +G F+I
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEY---TAREGAKFPIKWTAPEAINYGTFTI 185
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV+SFG+LL E ++ R TN + NL +R + ++ P E Y +
Sbjct: 186 KSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ----NL---ERGYRMVRPDNCPEELYQL 238
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ LC +E DRPT + S+L + F
Sbjct: 239 MR-------LCWKERPEDRPTFDYLRSVLEDFF 264
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 129/274 (47%), Gaps = 47/274 (17%)
Query: 465 NKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
+LG G FG V+ K G ++ F E L LQH LVRL
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHR 568
+ +I EY+ SL FL + + G + I IA+G+ Y+ R IHR
Sbjct: 79 REEPIYIITEYMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 134
Query: 569 DLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSIK 626
DL+ +N+L+ +++ KI+DFGLAR+ +E T R + + +PE G F+IK
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 627 SDVFSFGVLLLETLSSKRSTRFFNTNS--LTLLGHAWNLWKDDRSWELMDPKLQ-C-EAS 682
SDV+SFG+LL E ++ + TN+ +T L + + P+++ C +
Sbjct: 192 SDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQGYRM-----------PRVENCPDEL 240
Query: 683 YPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
Y I+K +C +E A +RPT + S+L +
Sbjct: 241 YDIMK-------MCWKEKAEERPTFDYLQSVLDD 267
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 460 NFGVENKLGEGGFGPVYKS------------------GQGLEEFKNEIKLTAKLQHRNLV 501
+ ++ K+G G FG V+++ + + EF E+ + +L+H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+G + ++ EYL SL L + L R+ + +A+G+ YLH +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
++HRDLK N+L+D K+ DFGL+R+ L S K GT +M+PE
Sbjct: 158 P-PIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS--KXAAGTPEWMAPEVLRDE 214
Query: 622 FFSIKSDVFSFGVLLLE 638
+ KSDV+SFGV+L E
Sbjct: 215 PSNEKSDVYSFGVILWE 231
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 28/236 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++RL G +++ EY+ N SLD+FL T +G
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQL 153
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ G+ G+ YL S L +HRDL N+L+DSN++ K+SDFGL+R+ D + T
Sbjct: 154 VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXT 210
Query: 604 KRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLG 658
T G + +PE FS SDV+SFGV++ E L+ ++N + ++
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-YWNMTNRDVIS 265
Query: 659 HAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + L P + C + + L C ++ A RP S+++S+L
Sbjct: 266 SV------EEGYRLPAP-MGCPHALH------QLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 473 GPVYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLF 530
GP ++SG +K EI + L H ++++ GCC +QGE L + EY+P SL +L
Sbjct: 56 GPQHRSG-----WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP 110
Query: 531 DTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGL 590
+ +G + + I +G+ YLH IHR+L N+LLD++ + KI DFGL
Sbjct: 111 RHS----IGLAQLLLFAQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 591 ARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFF 649
A+ G E + + +PE F SDV+SFGV L E L+ S++
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 650 NTNSLTLLGHAWNLWKDDRSWELMD--------PKLQCEASYPIVKRYINVALLCVQENA 701
T L L+G A R EL++ K CE Y ++K C + A
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV-YHLMKN-------CWETEA 275
Query: 702 ADRPTMSEVISML 714
+ RPT +I +L
Sbjct: 276 SFRPTFENLIPIL 288
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++ L G + ++I EY+ N SLD+FL +G
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQL 133
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSN 602
+ ++ GI G+ YL S + +HRDL NIL++SN++ K+SDFG++R+ D E
Sbjct: 134 VGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 190
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
T+ + +PE + F+ SDV+S+G+++ E +S + +N +
Sbjct: 191 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------D 242
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+ K + P + C PI + L C Q+ +DRP ++++ML N
Sbjct: 243 VIKAIEEGYRLPPPMDC----PIALH--QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPN 296
Query: 723 SPQQPGFSS 731
S ++ G S
Sbjct: 297 SLKRTGSES 305
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 31/253 (12%)
Query: 473 GPVYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSFLF 530
GP ++SG +K EI + L H ++++ GCC +QGE L+ EY+P SL +L
Sbjct: 56 GPQHRSG-----WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP 110
Query: 531 DTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGL 590
+ +G + + I +G+ YLH IHR+L N+LLD++ + KI DFGL
Sbjct: 111 RHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLVKIGDFGL 163
Query: 591 ARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFF 649
A+ G E + + +PE F SDV+SFGV L E L+ S++
Sbjct: 164 AKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 223
Query: 650 NTNSLTLLGHAWNLWKDDRSWELMD--------PKLQCEASYPIVKRYINVALLCVQENA 701
T L L+G A R EL++ K CE Y ++K C + A
Sbjct: 224 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEV-YHLMKN-------CWETEA 275
Query: 702 ADRPTMSEVISML 714
+ RPT +I +L
Sbjct: 276 SFRPTFENLIPIL 288
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 116/236 (49%), Gaps = 28/236 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++RL G +++ EY+ N SLD+FL T +G
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFL--RTHDGQFTIMQL 153
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ G+ G+ YL S L +HRDL N+L+DSN++ K+SDFGL+R+ D + T
Sbjct: 154 VGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYT 210
Query: 604 KRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLG 658
T G + +PE FS SDV+SFGV++ E L+ ++N + ++
Sbjct: 211 T----TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP-YWNMTNRDVIS 265
Query: 659 HAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + L P + C + + L C ++ A RP S+++S+L
Sbjct: 266 SV------EEGYRLPAP-MGCPHALH------QLMLDCWHKDRAQRPRFSQIVSVL 308
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++ L G + ++I EY+ N SLD+FL +G
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQL 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSN 602
+ ++ GI G+ YL S + +HRDL NIL++SN++ K+SDFG++R+ D E
Sbjct: 119 VGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 175
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
T+ + +PE + F+ SDV+S+G+++ E +S + +N +
Sbjct: 176 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------D 227
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+ K + P + C PI + L C Q+ +DRP ++++ML N
Sbjct: 228 VIKAIEEGYRLPPPMDC----PIALH--QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPN 281
Query: 723 SPQQPGFSS 731
S ++ G S
Sbjct: 282 SLKRTGSES 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 20/249 (8%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++ L G + ++I EY+ N SLD+FL +G
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFL--RKNDGRFTVIQL 112
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GI G+ YL S + +HRDL NIL++SN++ K+SDFG++R+ D + T
Sbjct: 113 VGMLRGIGSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYT 169
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + +PE + F+ SDV+S+G+++ E +S + +N +
Sbjct: 170 TRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ--------D 221
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+ K + P + C PI + L C Q+ +DRP ++++ML N
Sbjct: 222 VIKAIEEGYRLPPPMDC----PIALH--QLMLDCWQKERSDRPKFGQIVNMLDKLIRNPN 275
Query: 723 SPQQPGFSS 731
S ++ G S
Sbjct: 276 SLKRTGSES 284
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 466 KLGEGGFGPVY-----------------------KSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LGEG FG V+ S ++F+ E +L LQH+++VR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLF------------DTTKEGLLGWGARIRIIEGI 550
G C E ++++EY+ + L+ FL + G LG G + + +
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 144
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A G++YL + L +HRDL N L+ ++ KI DFG++R + R +
Sbjct: 145 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 201
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
+M PE ++ F+ +SDV+SFGV+L E + + + +N+
Sbjct: 202 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 244
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 466 KLGEGGFGPVY-----------------------KSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LGEG FG V+ S ++F+ E +L LQH+++VR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLF------------DTTKEGLLGWGARIRIIEGI 550
G C E ++++EY+ + L+ FL + G LG G + + +
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 138
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A G++YL + L +HRDL N L+ ++ KI DFG++R + R +
Sbjct: 139 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 195
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
+M PE ++ F+ +SDV+SFGV+L E + + + +N+
Sbjct: 196 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 21/197 (10%)
Query: 460 NFGVENKLGEGGFGPVYKS------------------GQGLEEFKNEIKLTAKLQHRNLV 501
+ ++ K+G G FG V+++ + + EF E+ + +L+H N+V
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+G + ++ EYL SL L + L R+ + +A+G+ YLH +
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN 157
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
++HR+LK N+L+D K+ DFGL+R+ L S K GT +M+PE
Sbjct: 158 P-PIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVLRDE 214
Query: 622 FFSIKSDVFSFGVLLLE 638
+ KSDV+SFGV+L E
Sbjct: 215 PSNEKSDVYSFGVILWE 231
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 38/223 (17%)
Query: 466 KLGEGGFGPVY-----------------------KSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LGEG FG V+ S ++F+ E +L LQH+++VR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLF------------DTTKEGLLGWGARIRIIEGI 550
G C E ++++EY+ + L+ FL + G LG G + + +
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQV 167
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A G++YL + L +HRDL N L+ ++ KI DFG++R + R +
Sbjct: 168 AAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPI 224
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
+M PE ++ F+ +SDV+SFGV+L E + + + +N+
Sbjct: 225 RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT 267
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 95/201 (47%), Gaps = 28/201 (13%)
Query: 461 FGVENKLGEGGFGPVY---------------------KSGQGLEEFKNEIKLTAKLQHRN 499
+ + +KLG GG VY + + L+ F+ E+ +++L H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+V ++ E L+ EY+ +L ++ G L I I G+ + H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHD 129
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
+R++HRD+KP NIL+DSN KI DFG+A+ L + T ++GT Y SPE A
Sbjct: 130 ---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL-TQTNHVLGTVQYFSPEQAK 185
Query: 620 HGFFSIKSDVFSFGVLLLETL 640
+D++S G++L E L
Sbjct: 186 GEATDECTDIYSIGIVLYEML 206
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 459 NNFGVENKLGEGGFGPVY-----------------KSGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY + +EEF E + +++H NLV
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 91
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + ++ EY+P +L +L + +E + + + I+ + YL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSAMEYL---E 147
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 148 KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 206
Query: 622 FFSIKSDVFSFGVLLLE 638
FSIKSDV++FGVLL E
Sbjct: 207 TFSIKSDVWAFGVLLWE 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 31/255 (12%)
Query: 471 GFGPVYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSF 528
G GP +SG ++ EI++ L H ++V+ GCC +QGE L+ EY+P SL +
Sbjct: 49 GCGPQLRSG-----WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY 103
Query: 529 LFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDF 588
L +G + + I +G+ YLH IHR L N+LLD++ + KI DF
Sbjct: 104 L----PRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDF 156
Query: 589 GLARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTR 647
GLA+ G E + + +PE F SDV+SFGV L E L+ S +
Sbjct: 157 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 216
Query: 648 FFNTNSLTLLGHAWNLWKDDRSWELMD--------PKLQCEASYPIVKRYINVALLCVQE 699
+T L+GH R EL++ + CE Y ++K C +
Sbjct: 217 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI-YHLMKN-------CWET 268
Query: 700 NAADRPTMSEVISML 714
A+ RPT ++ +L
Sbjct: 269 EASFRPTFQNLVPIL 283
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 31/255 (12%)
Query: 471 GFGPVYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSF 528
G GP +SG ++ EI++ L H ++V+ GCC +QGE L+ EY+P SL +
Sbjct: 48 GCGPQLRSG-----WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY 102
Query: 529 LFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDF 588
L +G + + I +G+ YLH IHR L N+LLD++ + KI DF
Sbjct: 103 L----PRHCVGLAQLLLFAQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDF 155
Query: 589 GLARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTR 647
GLA+ G E + + +PE F SDV+SFGV L E L+ S +
Sbjct: 156 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQ 215
Query: 648 FFNTNSLTLLGHAWNLWKDDRSWELMD--------PKLQCEASYPIVKRYINVALLCVQE 699
+T L+GH R EL++ + CE Y ++K C +
Sbjct: 216 SPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEI-YHLMKN-------CWET 267
Query: 700 NAADRPTMSEVISML 714
A+ RPT ++ +L
Sbjct: 268 EASFRPTFQNLVPIL 282
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 44/280 (15%)
Query: 467 LGEGGFGPVYK----SGQGLEE-------------------FKNEIKLTAKLQHRNLVRL 503
+G G FG VYK + G +E F E + + H N++RL
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
G + ++I EY+ N +LD FL + K+G + ++ GIA G+ YL + +
Sbjct: 112 EGVISKYKPMMIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYL---ANM 166
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSNTKRIVGTYGYMSPEYAIHGF 622
+HRDL NIL++SN++ K+SDFGL+R+ D E T + +PE +
Sbjct: 167 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRK 226
Query: 623 FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEAS 682
F+ SDV+SFG+++ E ++ + +N + A N + L P + C ++
Sbjct: 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM--KAIN-----DGFRLPTP-MDCPSA 278
Query: 683 YPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLP 722
+ + C Q+ A RP ++++S+L ++ + P
Sbjct: 279 I------YQLMMQCWQQERARRPKFADIVSIL-DKLIRAP 311
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 130/274 (47%), Gaps = 47/274 (17%)
Query: 465 NKLGEGGFGPVY---------------KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
KLG G FG V+ K G ++ F E L LQH LVRL
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHR 568
++ +I E++ SL FL + + G + I IA+G+ Y+ R IHR
Sbjct: 78 KEEPIYIITEFMAKGSLLDFL-KSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHR 133
Query: 569 DLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYMSPEYAIHGFFSIK 626
DL+ +N+L+ +++ KI+DFGLAR+ +E T R + + +PE G F+IK
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIEDNEY---TAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 627 SDVFSFGVLLLETLSSKRSTRFFNTNS--LTLLGHAWNLWKDDRSWELMDPKLQ-C-EAS 682
S+V+SFG+LL E ++ + TN+ ++ L + + P+++ C +
Sbjct: 191 SNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRM-----------PRMENCPDEL 239
Query: 683 YPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
Y I+K +C +E A +RPT + S+L +
Sbjct: 240 YDIMK-------MCWKEKAEERPTFDYLQSVLDD 266
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 193 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 245
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 246 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLT 492
SL + +++KLG G FG VY+ +EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 493 AKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQ 552
+++H NLV+LLG C + +I E++ +L +L + ++ + + + I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISS 120
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
+ YL + + IHRDL N L+ N + K++DFGL+R+ GD ++ +
Sbjct: 121 AMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KW 176
Query: 613 MSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWEL 672
+PE + FSIKSDV++FGVLL E + S + + +EL
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------PYPGIDPSQVYEL 222
Query: 673 MDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ + E ++ + C Q N +DRP+ +E+ F
Sbjct: 223 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYLE--- 133
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 193 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 245
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 246 VYELMR-------ACWQWNPSDRPSFAEIHQAFETMF 275
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 193 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 245
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 246 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 17 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 76
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 132
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 191
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 192 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 244
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 245 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 274
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 111/232 (47%), Gaps = 20/232 (8%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N++ L G + +++ EY+ N SLD+FL +G
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL--KKNDGQFTVIQL 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GI+ G+ YL S + +HRDL NIL++SN++ K+SDFGL+R+ D + T
Sbjct: 127 VGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYT 183
Query: 604 KRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
R + +PE F+ SDV+S+G+++ E +S + TN +
Sbjct: 184 TRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV--- 240
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + L P + C A+ + L C Q+ RP E+++ML
Sbjct: 241 ----EEGYRLPSP-MDCPAA------LYQLMLDCWQKERNSRPKFDEIVNML 281
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 192
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 193 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 245
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 246 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 72
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---E 128
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 187
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 188 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 240
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 241 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 270
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLT 492
SL + +++KLG G +G VY+ +EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 493 AKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQ 552
+++H NLV+LLG C + +I E++ +L +L + ++ + + + I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISS 120
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
+ YL + + IHRDL N L+ N + K++DFGL+R+ GD ++ +
Sbjct: 121 AMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KW 176
Query: 613 MSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWEL 672
+PE + FSIKSDV++FGVLL E + S S + +EL
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPS--------------QVYEL 222
Query: 673 MDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ + E ++ + C Q N +DRP+ +E+ F
Sbjct: 223 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 126/286 (44%), Gaps = 36/286 (12%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLT 492
SL + +++KLG G +G VY+ +EEF E +
Sbjct: 2 SLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVM 61
Query: 493 AKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQ 552
+++H NLV+LLG C + +I E++ +L +L + ++ + + + I+
Sbjct: 62 KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISS 120
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
+ YL + + IHRDL N L+ N + K++DFGL+R+ GD ++ +
Sbjct: 121 AMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI-KW 176
Query: 613 MSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWEL 672
+PE + FSIKSDV++FGVLL E + S + + +EL
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYGMS--------------PYPGIDPSQVYEL 222
Query: 673 MDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ + E ++ + C Q N +DRP+ +E+ F
Sbjct: 223 LEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 268
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 18 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 77
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 133
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 192
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 193 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 245
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 246 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 275
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL + +
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLEKKN 132
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 133 ---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI-KWTAPESLAYN 188
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 189 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 241
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 242 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 125/269 (46%), Gaps = 36/269 (13%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 85
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 141
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 200
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 201 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 253
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEV 710
Y +++ C Q N +DRP+ +E+
Sbjct: 254 VYELMRA-------CWQWNPSDRPSFAEI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 190 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 242
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 243 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 126/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYN 189
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 190 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 242
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 243 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 54/283 (19%)
Query: 459 NNFGVENKLGEGGFGPVYKS----------------GQGLEEFKNEIKLTAKLQHRNLVR 502
+ +E KLG G FG V+ + +E F E + LQH LV+
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 74
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG-------LLGWGARIRIIEGIAQGLL 555
L V + +I E++ SL FL + EG L+ + A+I A+G+
Sbjct: 75 L-HAVVTKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQI------AEGMA 125
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYM 613
++ Q + IHRDL+ +NIL+ ++++ KI+DFGLAR+ +E T R + +
Sbjct: 126 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWT 179
Query: 614 SPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELM 673
+PE G F+IKSDV+SFG+LL+E ++ R +N + +R + +
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-------ERGYRMP 232
Query: 674 DPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
P+ E Y N+ + C + +RPT + S+L +
Sbjct: 233 RPENCPEELY-------NIMMRCWKNRPEERPTFEYIQSVLDD 268
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 126/276 (45%), Gaps = 36/276 (13%)
Query: 460 NFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVR 502
+ +++KLG G +G VY+ +EEF E + +++H NLV+
Sbjct: 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQ 280
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSR 562
LLG C + +I E++ +L +L + ++ + + + I+ + YL +
Sbjct: 281 LLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSAMEYL---EK 336
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF 622
IHR+L N L+ N + K++DFGL+R+ GD ++ + +PE +
Sbjct: 337 KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNK 395
Query: 623 FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEAS 682
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 396 FSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEKV 448
Query: 683 YPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 449 YELMR-------ACWQWNPSDRPSFAEIHQAFETMF 477
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 119/252 (47%), Gaps = 29/252 (11%)
Query: 473 GPVYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLF 530
GP ++SG +K EI + L H ++++ GCC + G L + EY+P SL +L
Sbjct: 73 GPQHRSG-----WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP 127
Query: 531 DTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGL 590
+ +G + + I +G+ YLH IHRDL N+LLD++ + KI DFGL
Sbjct: 128 RHS----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGL 180
Query: 591 ARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFF 649
A+ G E + + +PE F SDV+SFGV L E L+ S++
Sbjct: 181 AKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSP 240
Query: 650 NTNSLTLLGHAWNLWKDDRSWELMD-----PKL-QCEAS-YPIVKRYINVALLCVQENAA 702
T L L+G A R EL++ P+ +C A Y ++K C + A+
Sbjct: 241 PTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKN-------CWETEAS 293
Query: 703 DRPTMSEVISML 714
RPT +I +L
Sbjct: 294 FRPTFENLIPIL 305
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 113/240 (47%), Gaps = 22/240 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++ L G + ++I E++ N SLDSFL +G
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQL 137
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL + + +HRDL NIL++SN++ K+SDFGL+R D
Sbjct: 138 VGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 194
Query: 604 KRIVG---TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHA 660
+G + +PE + F+ SDV+S+G+++ E +S + TN +
Sbjct: 195 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI---- 250
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
N + D + P + C ++ + L C Q++ RP ++++ L N
Sbjct: 251 -NAIEQDYR---LPPPMDCPSALH------QLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 74
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---E 130
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD + + +PE +
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 189
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 190 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 242
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 243 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 272
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 125/277 (45%), Gaps = 36/277 (12%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ +++KLG G +G VY+ +EEF E + +++H NLV
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLV 73
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
+LLG C + +I E++ +L +L + ++ + + + I+ + YL
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYLE--- 129
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+ IHRDL N L+ N + K++DFGL+R+ GD + + +PE +
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI-KWTAPESLAYN 188
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEA 681
FSIKSDV++FGVLL E +T + L + L + D + + P+ E
Sbjct: 189 KFSIKSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEK 241
Query: 682 SYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
Y +++ C Q N +DRP+ +E+ F
Sbjct: 242 VYELMRA-------CWQWNPSDRPSFAEIHQAFETMF 271
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
+++KLG G +G VY+ +EEF E + +++H NLV+LLG
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
C + +I E++ +L +L + ++ + + + I+ + YL +
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---EKKNF 378
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHR+L N L+ N + K++DFGL+R+ GD ++ + +PE + FSI
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 437
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV++FGVLL E +T + L + L + D + + P+ E Y +
Sbjct: 438 KSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEKVYEL 490
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ C Q N +DRP+ +E+ F
Sbjct: 491 MR-------ACWQWNPSDRPSFAEIHQAFETMF 516
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 44/220 (20%)
Query: 459 NNFGVENKLGEGGFGPVY-----------------------KSGQGLEEFKNEIKLTAKL 495
+N ++ +LGEG FG V+ S ++F E +L L
Sbjct: 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL 72
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL----------LGWGARIR 545
QH ++V+ G CVE ++++EY+ + L+ FL + + L +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
I + IA G++YL + +HRDL N L+ N++ KI DFG++R D ++ R
Sbjct: 133 IAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR----DVYSTDYYR 185
Query: 606 IVG----TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ G +M PE ++ F+ +SDV+S GV+L E +
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 125/273 (45%), Gaps = 36/273 (13%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
+++KLG G +G VY+ +EEF E + +++H NLV+LLG
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
C + +I E++ +L +L + ++ + + + I+ + YL +
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVNA-VVLLYMATQISSAMEYL---EKKNF 336
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHR+L N L+ N + K++DFGL+R+ GD ++ + +PE + FSI
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI-KWTAPESLAYNKFSI 395
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
KSDV++FGVLL E +T + L + L + D + + P+ E Y +
Sbjct: 396 KSDVWAFGVLLWEI-----ATYGMSPYPGIDLSQVYELLEKD--YRMERPEGCPEKVYEL 448
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ C Q N +DRP+ +E+ F
Sbjct: 449 MR-------ACWQWNPSDRPSFAEIHQAFETMF 474
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 131/283 (46%), Gaps = 54/283 (19%)
Query: 459 NNFGVENKLGEGGFGPVYKS----------------GQGLEEFKNEIKLTAKLQHRNLVR 502
+ +E KLG G FG V+ + +E F E + LQH LV+
Sbjct: 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 247
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG-------LLGWGARIRIIEGIAQGLL 555
L V + +I E++ SL FL + EG L+ + A+I A+G+
Sbjct: 248 L-HAVVTKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQI------AEGMA 298
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY--GYM 613
++ Q + IHRDL+ +NIL+ ++++ KI+DFGLAR+ +E T R + +
Sbjct: 299 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY---TAREGAKFPIKWT 352
Query: 614 SPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELM 673
+PE G F+IKSDV+SFG+LL+E ++ R +N + +R + +
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-------ERGYRMP 405
Query: 674 DPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
P+ E Y N+ + C + +RPT + S+L +
Sbjct: 406 RPENCPEELY-------NIMMRCWKNRPEERPTFEYIQSVLDD 441
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 463 VENKLGEGGFGPVYK--------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
VE +G G FG V K S + F E++ +++ H N+V+L G C+
Sbjct: 13 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHR 568
L+ EY SL + L + +QG+ YLH +IHR
Sbjct: 73 --NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 569 DLKPSNILLDS-NMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKS 627
DLKP N+LL + + KI DFG A ++Q++ G+ +M+PE +S K
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 628 DVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVK 687
DVFS+G++L E ++ ++ + ++ W + R P L PI
Sbjct: 186 DVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTR------PPLIKNLPKPIE- 235
Query: 688 RYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ C ++ + RP+M E++ ++T+ P +P
Sbjct: 236 ---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 272
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 122/280 (43%), Gaps = 35/280 (12%)
Query: 463 VENKLGEGGFGPVYK--------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCV 508
VE +G G FG V K S + F E++ +++ H N+V+L G C+
Sbjct: 12 VEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHR 568
L+ EY SL + L + +QG+ YLH +IHR
Sbjct: 72 --NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 569 DLKPSNILLDS-NMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKS 627
DLKP N+LL + + KI DFG A ++Q++ G+ +M+PE +S K
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 628 DVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVK 687
DVFS+G++L E ++ ++ + ++ W + R P L PI
Sbjct: 185 DVFSWGIILWEVITRRKPFDEIGGPAFRIM---WAVHNGTR------PPLIKNLPKPIE- 234
Query: 688 RYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQP 727
++ C ++ + RP+M E++ ++T+ P +P
Sbjct: 235 ---SLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEP 271
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 121
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 122 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 179 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 235 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 273
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 55 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 112
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 113 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 169
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 170 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 225
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 226 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 264
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 48 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 105
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 106 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 162
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 163 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 218
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 219 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 257
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 44 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 101
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 102 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 158
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 159 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 215 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 253
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 106
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 107 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 164 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 219
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 220 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 121
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 122 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSS 178
Query: 603 TKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLL 657
VG+ + PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 179 ----VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 234
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 235 AQGLRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 273
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 107/231 (46%), Gaps = 47/231 (20%)
Query: 463 VENKLGEGGFGPVYKSG-----------------------QGLEEFKNEIKLTAKLQHRN 499
++ +LGEG FG V+ + ++F+ E +L LQH +
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEH 78
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLF-------------DTTKEGLLGWGARIRI 546
+V+ G C + ++++EY+ + L+ FL +G LG + I
Sbjct: 79 IVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHI 138
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI 606
IA G++YL + +HRDL N L+ +N++ KI DFG++R D ++ R+
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSR----DVYSTDYYRV 191
Query: 607 VG----TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
G +M PE ++ F+ +SDV+SFGV+L E + + F +N+
Sbjct: 192 GGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 62/294 (21%)
Query: 459 NNFGVENKLGEGGFGPVYKS----------------GQGLEEFKNEIKLTAKLQHRNLVR 502
+ +E KLG G FG V+ + +E F E + LQH LV+
Sbjct: 182 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVK 241
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG-------LLGWGARIRIIEGIAQGLL 555
L V + +I E++ SL FL + EG L+ + A+I A+G+
Sbjct: 242 L-HAVVTKEPIYIITEFMAKGSLLDFL--KSDEGSKQPLPKLIDFSAQI------AEGMA 292
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
++ Q + IHRDL+ +NIL+ ++++ KI+DFGLAR+ ++ + +P
Sbjct: 293 FIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVGAKFPIK-----------WTAP 338
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E G F+IKSDV+SFG+LL+E ++ R +N + +R + + P
Sbjct: 339 EAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-------ERGYRMPRP 391
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPS--PQQP 727
+ E Y N+ + C + +RPT + S+L + + S QQP
Sbjct: 392 ENCPEELY-------NIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQXQQQP 438
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E K+ L H LV+L G C +Q +I EY+ N L ++L +
Sbjct: 49 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR--FQTQQ 106
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + + + + YL + +HRDL N L++ + K+SDFGL+R DE S+
Sbjct: 107 LLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 163
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
+ PE ++ FS KSD+++FGVL+ E +L RF N+ + +
Sbjct: 164 RGSKFPV-RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG 222
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
L++ P L E Y I+ C E A +RPT ++S
Sbjct: 223 LRLYR---------PHLASEKVYTIMYS-------CWHEKADERPTFKILLS 258
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYK------------------------SGQGLEEFK 486
L +S + F E LGE FG VYK G EEF+
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLF-------------DTT 533
+E L A+LQH N+V LLG + +I+ Y + L FL D T
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 534 KEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
+ L + ++ IA G+ YL S V+H+DL N+L+ + KISD GL R
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 594 FGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ + +M+PE ++G FSI SD++S+GV+L E S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 22/240 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F +E + + H N++ L G + ++I E++ N SLDSFL +G
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFL--RQNDGQFTVIQL 111
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL + + +HR L NIL++SN++ K+SDFGL+R D
Sbjct: 112 VGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTY 168
Query: 604 KRIVG---TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHA 660
+G + +PE + F+ SDV+S+G+++ E +S + TN +
Sbjct: 169 TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI---- 224
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
N + D + P + C ++ + L C Q++ RP ++++ L N
Sbjct: 225 -NAIEQDYR---LPPPMDCPSALH------QLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 42/228 (18%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYK------------------------SGQGLEEFK 486
L +S + F E LGE FG VYK G EEF+
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLF-------------DTT 533
+E L A+LQH N+V LLG + +I+ Y + L FL D T
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 534 KEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
+ L + ++ IA G+ YL S V+H+DL N+L+ + KISD GL R
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 594 FGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ + +M+PE ++G FSI SD++S+GV+L E S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 28/243 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EF +E + + +H N++RL G +++ E++ N +LDSFL +G
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQL 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL + S +HRDL NIL++SN++ K+SDFGL+R E S+
Sbjct: 119 VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFL---EENSSD 172
Query: 604 KRIVGTYG------YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+ G + +PE F+ SD +S+G+++ E +S + +N +
Sbjct: 173 PTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI- 231
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
N + D + P C S + L C Q++ RP +V+S L
Sbjct: 232 ----NAIEQDYR---LPPPPDCPTSLH------QLMLDCWQKDRNARPRFPQVVSALDKM 278
Query: 718 FVN 720
N
Sbjct: 279 IRN 281
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----SGQGLE------------------EFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK G+ ++ EF +E + A + H +LVRL
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ L+ + +P+ L ++ + + LL W +I A+G++YL +
Sbjct: 83 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ S KI+DFGLAR+ GDE + N +M+ E
Sbjct: 136 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
+ F+ +SDV+S+GV + E ++
Sbjct: 193 YRKFTHQSDVWSYGVTIWELMT 214
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----SGQGLE------------------EFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK G+ ++ EF +E + A + H +LVRL
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ L+ + +P+ L ++ + + LL W +I A+G++YL +
Sbjct: 106 LGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLEE 158
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ S KI+DFGLAR+ GDE + N +M+ E
Sbjct: 159 R---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIH 215
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
+ F+ +SDV+S+GV + E ++
Sbjct: 216 YRKFTHQSDVWSYGVTIWELMT 237
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 110/240 (45%), Gaps = 22/240 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EF +E + + +H N++RL G +++ E++ N +LDSFL +G
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFL--RLNDGQFTVIQL 120
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL + S +HRDL NIL++SN++ K+SDFGL+R +
Sbjct: 121 VGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE 177
Query: 604 KRIVG---TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHA 660
+G + +PE F+ SD +S+G+++ E +S + +N +
Sbjct: 178 TSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI---- 233
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
N + D + P C S + L C Q++ RP +V+S L N
Sbjct: 234 -NAIEQDYR---LPPPPDCPTSLH------QLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 30/243 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E + + H N+V L G +++ E++ N +LD+FL +G
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFL--RKHDGQFTVIQL 147
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ ++ GIA G+ YL + + +HRDL NIL++SN++ K+SDFGL+R+ ++ +
Sbjct: 148 VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-----IEDDP 199
Query: 604 KRIVGTYG------YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+ + T G + +PE + F+ SDV+S+G+++ E +S + +N +
Sbjct: 200 EAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIK 259
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ + L P + C A + L C Q+ A+RP +++ +L
Sbjct: 260 AI-------EEGYRLPAP-MDCPAGLH------QLMLDCWQKERAERPKFEQIVGILDKM 305
Query: 718 FVN 720
N
Sbjct: 306 IRN 308
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 66/303 (21%)
Query: 459 NNFGVENKLGEGGFGPVYKS-GQGL-----------------------EEFKNEIKLTAK 494
NN +GEG FG V+++ GL +F+ E L A+
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL----------------- 537
+ N+V+LLG C L++EY+ L+ FL + +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 538 ----LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR- 592
L ++ I +A G+ YL S + +HRDL N L+ NM+ KI+DFGL+R
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
++ D +++ + +M PE + ++ +SDV+++GV+L E S
Sbjct: 224 IYSADYYKADGNDAIPI-RWMPPESIFYNRYTTESDVWAYGVVLWEIFSYG--------- 273
Query: 653 SLTLLGHAWNLWKDDRSWELMDPK-LQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
L + + ++ + + D L C + P+ N+ LC + ADRP+ +
Sbjct: 274 ----LQPYYGMAHEEVIYYVRDGNILACPENCPL--ELYNLMRLCWSKLPADRPSFCSIH 327
Query: 712 SML 714
+L
Sbjct: 328 RIL 330
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 56/311 (18%)
Query: 466 KLGEGGFGPVY---------------------KSGQGLEEFKNEIKLTAKLQHRNLVRLL 504
++G G FG VY +S + ++ E++ KL+H N ++
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
GC + + L+ EY + D L + K+ L + G QGL YLH ++
Sbjct: 121 GCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN--- 174
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI---HG 621
+IHRD+K NILL + K+ DFG A + + VGT +M+PE + G
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH-AWNLWKDDRSWELMDPKLQCE 680
+ K DV+S G+ +E ++R FN N+++ L H A N P LQ
Sbjct: 229 QYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHIAQN----------ESPALQSG 276
Query: 681 ASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPGFSSLKKSVETVA 740
+ +++ C+Q+ DRPT SEV +L + FV P ++++ + V
Sbjct: 277 HWSEYFRNFVDS---CLQKIPQDRPT-SEV--LLKHRFVLRERPPTVIMDLIQRTKDAV- 329
Query: 741 RSMNRLTLSVM 751
R ++ L M
Sbjct: 330 RELDNLQYRKM 340
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 121/278 (43%), Gaps = 49/278 (17%)
Query: 460 NFGVENKLGEGGFGPVYKSGQGLE---------------------EFKNEIKLTAKLQHR 498
NF +E K+G G F VY++ L+ + EI L +L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLL-----GWGARIRIIEGIAQG 553
N+++ +E E ++ E L + K+ L W +++ +
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALE-- 150
Query: 554 LLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYM 613
H +SR RV+HRD+KP+N+ + + + K+ D GL R F +++ +VGT YM
Sbjct: 151 ----HMHSR-RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYM 203
Query: 614 SPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELM 673
SPE ++ KSD++S G LL E + + + F+ G NL+ + E
Sbjct: 204 SPERIHENGYNFKSDIWSLGCLLYEMAALQ--SPFY--------GDKMNLYSLCKKIEQC 253
Query: 674 D-PKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
D P L + +++ +N +C+ + RP ++ V
Sbjct: 254 DYPPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYV 288
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 56/311 (18%)
Query: 466 KLGEGGFGPVY---------------------KSGQGLEEFKNEIKLTAKLQHRNLVRLL 504
++G G FG VY +S + ++ E++ KL+H N ++
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 81
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
GC + + L+ EY + D L + K+ L + G QGL YLH ++
Sbjct: 82 GCYLREHTAWLVMEYCLGSASD--LLEVHKKPLQEVEIAA-VTHGALQGLAYLHSHN--- 135
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI---HG 621
+IHRD+K NILL + K+ DFG A + + VGT +M+PE + G
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSA------SIMAPANXFVGTPYWMAPEVILAMDEG 189
Query: 622 FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH-AWNLWKDDRSWELMDPKLQCE 680
+ K DV+S G+ +E ++R FN N+++ L H A N P LQ
Sbjct: 190 QYDGKVDVWSLGITCIEL--AERKPPLFNMNAMSALYHIAQN----------ESPALQSG 237
Query: 681 ASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSPQQPGFSSLKKSVETVA 740
+ +++ C+Q+ DRPT SEV +L + FV P ++++ + V
Sbjct: 238 HWSEYFRNFVDS---CLQKIPQDRPT-SEV--LLKHRFVLRERPPTVIMDLIQRTKDAV- 290
Query: 741 RSMNRLTLSVM 751
R ++ L M
Sbjct: 291 RELDNLQYRKM 301
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 120
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 619 I-HGFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 107/208 (51%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 119
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPE 174
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHR 498
NF K+GEG +G VYK +G+ + K EI L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 120
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHR 498
NF K+GEG +G VYK +G+ + K EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 124
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 125 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 179
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 120
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 127
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 182
Query: 619 I-HGFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 108/235 (45%), Gaps = 30/235 (12%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
+EF E + KL H LV+ G C ++ ++ EY+ N L ++L K L
Sbjct: 48 DEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKG--LEPSQ 105
Query: 543 RIRIIEGIAQGLLYL--HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
+ + + +G+ +L HQ+ IHRDL N L+D ++ K+SDFG+ R D+
Sbjct: 106 LLEMCYDVCEGMAFLESHQF-----IHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160
Query: 601 SNTKRIVGT---YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
S+ VGT + +PE + +S KSDV++FG+L+ E S + TNS +L
Sbjct: 161 SS----VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
K + L P L + Y I+ C E RPT +++S
Sbjct: 217 -------KVSQGHRLYRPHLASDTIYQIMYS-------CWHELPEKRPTFQQLLS 257
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 120
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEG 536
G + + K EI++ L H N+V+ G C E G N LI E+LP+ SL +L +
Sbjct: 64 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKN 121
Query: 537 LLGWGARIRIIEGIAQGLLYL--HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
+ +++ I +G+ YL QY +HRDL N+L++S KI DFGL +
Sbjct: 122 KINLKQQLKYAVQICKGMDYLGSRQY-----VHRDLAARNVLVESEHQVKIGDFGLTKAI 176
Query: 595 GGDELQSNTK--RIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
D+ K R + Y +PE + F I SDV+SFGV L E L+
Sbjct: 177 ETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 127
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 128 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 182
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEG 536
G + + K EI++ L H N+V+ G C E G N LI E+LP+ SL +L +
Sbjct: 52 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL--PKNKN 109
Query: 537 LLGWGARIRIIEGIAQGLLYL--HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
+ +++ I +G+ YL QY +HRDL N+L++S KI DFGL +
Sbjct: 110 KINLKQQLKYAVQICKGMDYLGSRQY-----VHRDLAARNVLVESEHQVKIGDFGLTKAI 164
Query: 595 GGDELQSNTK--RIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
D+ K R + Y +PE + F I SDV+SFGV L E L+
Sbjct: 165 ETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLSFCH 120
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 121 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 175
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 107/206 (51%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E++ ++ L +F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ T +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYTHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 459 NNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKLTAKL-Q 496
N+ ++ +GEG FG V Y S +F E+++ KL
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL-------------FDTTKEGLLGWGAR 543
H N++ LLG C +G L EY P+ +L FL + L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ +A+G+ YL S+ + IHRDL NIL+ N + KI+DFGL+R G E+
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--V 186
Query: 604 KRIVGT--YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K+ +G +M+ E + ++ SDV+S+GVLL E +S
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 107/209 (51%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L +F+ + G+ + + + + QGL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQ-LLQGLA 120
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 459 NNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKLTAKL-Q 496
N+ ++ +GEG FG V Y S +F E+++ KL
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL-------------FDTTKEGLLGWGAR 543
H N++ LLG C +G L EY P+ +L FL + L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ +A+G+ YL S+ + IHRDL NIL+ N + KI+DFGL+R G E+
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVY--V 196
Query: 604 KRIVGT--YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K+ +G +M+ E + ++ SDV+S+GVLL E +S
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 41/218 (18%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 97
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-------IRI 546
L QH N+V LLG C G ++I EY L +FL + L R +
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE---LQSNT 603
+AQG+ +L + IHRD+ N+LL + + KI DFGLAR D ++ N
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 214
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ V +M+PE ++++SDV+S+G+LL E S
Sbjct: 215 RLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 129
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 130 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 103/215 (47%), Gaps = 33/215 (15%)
Query: 451 LASVSAATNNFGVENK---LGEGGFGPVYK---SGQGL---------------EEFKNEI 489
+ + A N+F +K LG G FG V+K + GL EE KNEI
Sbjct: 78 VTAKQGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEI 137
Query: 490 KLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEG 549
+ +L H NL++L + + VL+ EY+ L + D + L I ++
Sbjct: 138 SVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQ 195
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILL---DSNMIPKISDFGLARMFGGDELQSNTKRI 606
I +G+ ++HQ + ++H DLKP NIL D+ I KI DFGLAR + E K
Sbjct: 196 ICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQI-KIIDFGLARRYKPRE---KLKVN 248
Query: 607 VGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT +++PE + F S +D++S GV+ LS
Sbjct: 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS 283
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 98/218 (44%), Gaps = 41/218 (18%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-------IRI 546
L QH N+V LLG C G ++I EY L +FL + L R +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE---LQSNT 603
+AQG+ +L + IHRD+ N+LL + + KI DFGLAR D ++ N
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 222
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ V +M+PE ++++SDV+S+G+LL E S
Sbjct: 223 RLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 118
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 121
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 120
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 118
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 119
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 120 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 119
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 120 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 174
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 118
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 119 FCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 173
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 120
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 134
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 135 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAF 118
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 128
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 129 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 118
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 118
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 119 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 173
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 174 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 119
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 120 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 174
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 137
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 138 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 161
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 162 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELFT 243
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 135
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 136 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 133
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 134 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 106/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 119
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 174
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 121
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 122 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 176
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 136
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 137 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 29/213 (13%)
Query: 450 SLAS-VSAATNNFGVENKLGEGGFGPVYKS---GQGLE------------------EFKN 487
SLA+ + +F V N LG+G F VY++ GLE +N
Sbjct: 1 SLATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQN 60
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
E+K+ +L+H +++ L + L+ E N ++ +L + K +
Sbjct: 61 EVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP--FSENEARHFM 118
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIV 607
I G+LYLH + ++HRDL SN+LL NM KI+DFGLA + T +
Sbjct: 119 HQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LC 173
Query: 608 GTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
GT Y+SPE A ++SDV+S G + L
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLL 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKE-GLLGWGAR 543
+E+ L +L+H N+VR +++ L + EY L S + TKE L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 544 IRIIEGIAQGLLYLHQYSR--LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+R++ + L H+ S V+HRDLKP+N+ LD K+ DFGLAR+ DE
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--D 171
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
K VGT YMSPE ++ KSD++S G LL E
Sbjct: 172 FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 105/206 (50%), Gaps = 28/206 (13%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHR 498
NF K+GEG +G VYK+ L++ + EI L +L H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N+V+LL + + L++E+L ++ L F+ + G+ + + + + QGL + H
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAFCH 121
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
+ RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 122 SH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPEIL 176
Query: 619 IH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 28/199 (14%)
Query: 465 NKLGEGGFGPVYKS--GQG----LEEFK-------------NEIKLTAKLQHRNLVRLLG 505
K+GEG +G VYK+ QG L+ + EI L +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++E++ K L L D K GL +I + + + +G+ + HQ+ R+
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HGFFS 624
+HRDLKP N+L++S+ K++DFGLAR FG ++S T +V T Y +P+ + +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 625 IKSDVFSFGVLLLETLSSK 643
D++S G + E ++ K
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 104/199 (52%), Gaps = 28/199 (14%)
Query: 465 NKLGEGGFGPVYKS--GQG----LEEFK-------------NEIKLTAKLQHRNLVRLLG 505
K+GEG +G VYK+ QG L+ + EI L +L H N+V L+
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLID 86
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++E++ K L L D K GL +I + + + +G+ + HQ+ R+
Sbjct: 87 VIHSERCLTLVFEFM-EKDLKKVL-DENKTGLQDSQIKIYLYQ-LLRGVAHCHQH---RI 140
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HGFFS 624
+HRDLKP N+L++S+ K++DFGLAR FG ++S T +V T Y +P+ + +S
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGI-PVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 625 IKSDVFSFGVLLLETLSSK 643
D++S G + E ++ K
Sbjct: 199 TSVDIWSIGCIFAEMITGK 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 34 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 148
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 149 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 205
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 206 SLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 476 YKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTT 533
+ + + L +F+ EI++ LQH N+V+ G C G LI EYLP SL +L
Sbjct: 67 HSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKH 125
Query: 534 KEGLLGWGARIRIIE---GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGL 590
KE + I++++ I +G+ YL R IHRDL NIL+++ KI DFGL
Sbjct: 126 KERI----DHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGL 178
Query: 591 ARMFGGDELQSNTKRI-VGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
++ D+ K + +PE FS+ SDV+SFGV+L E +
Sbjct: 179 TKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 77 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 129
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 42/208 (20%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFL------FDTTKEGLLGWGARIRIIEGIAQGL 554
G C G LI EYLP SL +L D K LL + ++I +G+
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIK--LLQYTSQI------CKGM 130
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYM 613
YL R IHRDL NIL+++ KI DFGL ++ D+ K +
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 614 SPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+PE FS+ SDV+SFGV+L E +
Sbjct: 188 APESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 14 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 73
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 74 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 126
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 127 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 185
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 186 NPYSFQSDVYAFGIVLYELMTGQ 208
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 39 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 98
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 99 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 151
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 152 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 210
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 211 NPYSFQSDVYAFGIVLYELMTGQ 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 17 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 76
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 77 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 129
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 130 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 188
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 189 NPYSFQSDVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 72 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 124
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 123/300 (41%), Gaps = 60/300 (20%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL-------------LGW 540
L QH N+V LLG C G ++I EY L +FL GL L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
+ +AQG+ +L + IHRD+ N+LL + + KI DFGLAR D
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 222
Query: 599 -LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
++ N + V +M+PE ++++SDV+S+G+LL E S + + +
Sbjct: 223 IVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVN 275
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ L KD +++ P + Y I++ C RPT ++ S L +
Sbjct: 276 SKFYKLVKD--GYQMAQPAFAPKNIYSIMQ-------ACWALEPTHRPTFQQICSFLQEQ 326
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 100 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 152
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 211
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 212 NPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L + L F+ + G+ + + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAF 121
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L + L F+ + G+ + + + + QGL +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQ-LLQGLAF 120
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 121 CHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 175
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 176 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 106/209 (50%), Gaps = 28/209 (13%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKL 495
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
H N+V+LL + + L++E++ ++ L F+ + G+ + + + + QGL
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLA 120
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +P
Sbjct: 121 FCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAP 175
Query: 616 EYAIH-GFFSIKSDVFSFGVLLLETLSSK 643
E + ++S D++S G + E ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKE-GLLGWGAR 543
+E+ L +L+H N+VR +++ L + EY L S + TKE L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 544 IRIIEGIAQGLLYLHQYSR--LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+R++ + L H+ S V+HRDLKP+N+ LD K+ DFGLAR+ D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TS 171
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
K VGT YMSPE ++ KSD++S G LL E
Sbjct: 172 FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 100/220 (45%), Gaps = 45/220 (20%)
Query: 459 NNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKLTAKL-Q 496
N+ ++ +GEG FG V Y S +F E+++ KL
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL-------------FDTTKEGLLGWGAR 543
H N++ LLG C +G L EY P+ +L FL + L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
+ +A+G+ YL S+ + IHR+L NIL+ N + KI+DFGL+R G E+
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVY--V 193
Query: 604 KRIVGT--YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K+ +G +M+ E + ++ SDV+S+GVLL E +S
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L + L F+ + G+ + + + + QGL +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 121
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 122 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 176
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 177 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 28/208 (13%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQ 496
+ NF K+GEG +G VYK+ L++ + EI L +L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+LL + + L++E+L + L F+ + G+ + + + + QGL +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQ-LLQGLAF 119
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H + RV+HRDLKP N+L+++ K++DFGLAR FG +++ +V T Y +PE
Sbjct: 120 CHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGV-PVRTYXHEVV-TLWYRAPE 174
Query: 617 YAIH-GFFSIKSDVFSFGVLLLETLSSK 643
+ ++S D++S G + E ++ +
Sbjct: 175 ILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 7/157 (4%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKE-GLLGWGAR 543
+E+ L +L+H N+VR +++ L + EY L S + TKE L
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 544 IRIIEGIAQGLLYLHQYSR--LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+R++ + L H+ S V+HRDLKP+N+ LD K+ DFGLAR+ D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD--TS 171
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
K VGT YMSPE ++ KSD++S G LL E
Sbjct: 172 FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 466 KLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVRL 503
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 20 QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 504 LGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYLH 558
G C G LI E+LP SL +L KE + I++++ I +G+ YL
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERI----DHIKLLQYTSQICKGMEYL- 133
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPEY 617
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPES 191
Query: 618 AIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 192 LTESKFSVASDVWSFGVVLYELFT 215
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 72 YSTAP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 124
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIH 620
+IHRDLK +NI L ++ KI DFGLA + +++ G+ +M+PE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDK 183
Query: 621 GFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 184 NPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 38/207 (18%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 32 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 91
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 92 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 144
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE--- 616
+IHRDLK +NI L ++ KI DFGLA R G + + ++ G+ +M+PE
Sbjct: 145 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIR 199
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQ 226
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 38/207 (18%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 12 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 71
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 72 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 124
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE--- 616
+IHRDLK +NI L ++ KI DFGLA R G + + ++ G+ +M+PE
Sbjct: 125 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIR 179
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 80/168 (47%), Gaps = 17/168 (10%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI 544
F E+K+ L+H N+++ +G + I EY+ +L + + + W R+
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII--KSMDSQYPWSQRV 111
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ IA G+ YLH + +IHRDL N L+ N ++DFGLAR+ ++ Q
Sbjct: 112 SFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
Query: 605 R------------IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
R +VG +M+PE + K DVFSFG++L E +
Sbjct: 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 101/207 (48%), Gaps = 38/207 (18%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 40 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 99
Query: 506 CCVEQGENVLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+ + ++ ++ SL L +T E + I I AQG+ YLH S
Sbjct: 100 YSTKP-QLAIVTQWCEGSSLYHHLHIIETKFEMI----KLIDIARQTAQGMDYLHAKS-- 152
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE--- 616
+IHRDLK +NI L ++ KI DFGLA R G + + ++ G+ +M+PE
Sbjct: 153 -IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIR 207
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQ 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHRDL NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 131 ---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 58/298 (19%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK-----------EGLLGWGA 542
L QH N+V LLG C G ++I EY L +FL ++ L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE---L 599
+ +AQG+ +L + IHRD+ N+LL + + KI DFGLAR D +
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH 659
+ N + V +M+PE ++++SDV+S+G+LL E S + + +
Sbjct: 223 KGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSK 275
Query: 660 AWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ L KD +++ P + Y I++ C RPT ++ S L +
Sbjct: 276 FYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + NT +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 26/201 (12%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 16 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 75
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ + ++ ++ SL L + E I I A+G+ YLH S +
Sbjct: 76 YSTKP-QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 129
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE---YAIHGF 622
IHRDLK +NI L + KI DFGLA + +++ G+ +M+PE
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 623 FSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQ 210
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 125/298 (41%), Gaps = 58/298 (19%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 105
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGARIRI 546
L QH N+V LLG C G ++I EY L +FL ++ + A R
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 547 I----EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE---L 599
+ +AQG+ +L + IHRD+ N+LL + + KI DFGLAR D +
Sbjct: 166 LLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 222
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGH 659
+ N + V +M+PE ++++SDV+S+G+LL E S + + +
Sbjct: 223 KGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP----YPGILVNSK 275
Query: 660 AWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNE 717
+ L KD +++ P + Y I++ C RPT ++ S L +
Sbjct: 276 FYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQICSFLQEQ 324
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 465 NKLGEGGFGPV----------------------YKSGQGLEEFKNEIKLTAKLQHRNLVR 502
+LG+G FG V + + + L +F+ EI++ LQH N+V+
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 503 LLGCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE---GIAQGLLYL 557
G C G LI EYLP SL +L KE + I++++ I +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERI----DHIKLLQYTSQICKGMEYL 131
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI-VGTYGYMSPE 616
R IHR+L NIL+++ KI DFGL ++ D+ K + +PE
Sbjct: 132 ---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 617 YAIHGFFSIKSDVFSFGVLLLETLS 641
FS+ SDV+SFGV+L E +
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELFT 213
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 117/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 67 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 126
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 127 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 177
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 178 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 236
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + L + R L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 237 DITVY---LLQGRR---LLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 283
Query: 715 TNEF 718
+ F
Sbjct: 284 SAIF 287
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 34/205 (16%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ + ++ ++ SL L + E I I A+G+ YLH S +
Sbjct: 88 YSTKP-QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE---YA 618
IHRDLK +NI L + KI DFGLA R G + + ++ G+ +M+PE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 197
Query: 619 IHGFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 93 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 152
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 153 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 203
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 204 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 262
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 263 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 309
Query: 715 TNEF 718
+ F
Sbjct: 310 SAIF 313
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LGEG FG V K S L + +E + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG------------------ 536
+ H ++++L G C + G +LI EY SL FL ++ K G
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 537 ---LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
L G I I+QG+ YL + ++++HRDL NIL+ KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 594 FGGDELQSNTKRIVG--TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
E S KR G +M+ E ++ +SDV+SFGVLL E ++
Sbjct: 200 VY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 134 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 185 KEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 243
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 244 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 290
Query: 715 TNEF 718
+ F
Sbjct: 291 SAIF 294
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 125/307 (40%), Gaps = 67/307 (21%)
Query: 459 NNFGVENKLGEGGFGPVYKS---GQGLEE---------------------FKNEIKLTAK 494
NN LG G FG V ++ G G E+ +E+K+ +
Sbjct: 31 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSH 90
Query: 495 L-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK-------------EGLLGW 540
L QH N+V LLG C G ++I EY L +FL + EGL
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 541 GAR-------IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
R + +AQG+ +L + IHRD+ N+LL + + KI DFGLAR
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 594 FGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFN 650
D ++ N + V +M+PE ++++SDV+S+G+LL E S +
Sbjct: 208 IMNDSNYIVKGNARLPV---KWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---- 260
Query: 651 TNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
+ + + L KD +++ P + Y I++ C RPT ++
Sbjct: 261 YPGILVNSKFYKLVKD--GYQMAQPAFAPKNIYSIMQA-------CWALEPTHRPTFQQI 311
Query: 711 ISMLTNE 717
S L +
Sbjct: 312 CSFLQEQ 318
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 114/283 (40%), Gaps = 47/283 (16%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNE 488
++ S A +F + LG+G FG VY + + G+E + + E
Sbjct: 2 AMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
+++ + L+H N++RL G + LI EY P L + + K I
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYIT 118
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
+A L Y H RVIHRD+KP N+LL S KI+DFG + S + G
Sbjct: 119 ELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCG 171
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDR 668
T Y+ PE K D++S GVL E L K F N+ +K
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRIS 222
Query: 669 SWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E P E + ++ R ++ N + RP + EV+
Sbjct: 223 RVEFTFPDFVTEGARDLISR-------LLKHNPSQRPMLREVL 258
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 135 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 244
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 245 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
Query: 715 TNEF 718
+ F
Sbjct: 292 SAIF 295
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 70 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 129
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 130 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 239
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 240 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 286
Query: 715 TNEF 718
+ F
Sbjct: 287 SAIF 290
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 72 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 132 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 182
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 183 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 241
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 242 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 288
Query: 715 TNEF 718
+ F
Sbjct: 289 SAIF 292
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 113/283 (39%), Gaps = 47/283 (16%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEI 489
L S A +F + LG+G FG VY + + G+E + + E+
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 490 KLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEG 549
++ + L+H N++RL G + LI EY P L + + K I
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITE 119
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+A L Y H RVIHRD+KP N+LL S KI+DFG + S + GT
Sbjct: 120 LANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGT 172
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRS 669
Y+ PE K D++S GVL E L K F N+ +K
Sbjct: 173 LDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISR 223
Query: 670 WELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E P E + ++ R ++ N + RP + EV+
Sbjct: 224 VEFTFPDFVTEGARDLISR-------LLKHNPSQRPMLREVLE 259
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 135 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 186 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 244
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 245 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
Query: 715 TNEF 718
+ F
Sbjct: 292 SAIF 295
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 74 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 134 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 184
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 185 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 243
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 244 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 290
Query: 715 TNEF 718
+ F
Sbjct: 291 SAIF 294
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 94 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 153
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 154 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 204
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 205 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 263
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 264 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 310
Query: 715 TNEF 718
+ F
Sbjct: 311 SAIF 314
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ YL + + +HRDL N +LD K++DFGLAR
Sbjct: 133 LIGFGLQV------AKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 184 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 242
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 243 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 289
Query: 715 TNEF 718
+ F
Sbjct: 290 SAIF 293
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
V ++G G FG VYK + Q L+ FKNE+ + K +H N++ +G
Sbjct: 28 VGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG 87
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ ++ ++ SL L + E I I A+G+ YLH S +
Sbjct: 88 YSTAP-QLAIVTQWCEGSSLYHHLHAS--ETKFEMKKLIDIARQTARGMDYLHAKS---I 141
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE---YA 618
IHRDLK +NI L + KI DFGLA R G + + ++ G+ +M+PE
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE----QLSGSILWMAPEVIRMQ 197
Query: 619 IHGFFSIKSDVFSFGVLLLETLSSK 643
+S +SDV++FG++L E ++ +
Sbjct: 198 DSNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 134 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 193
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 194 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 244
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 245 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 303
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 304 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 350
Query: 715 TNEF 718
+ F
Sbjct: 351 SAIF 354
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 90/216 (41%), Gaps = 46/216 (21%)
Query: 467 LGEGGFGPVYKSGQGL-------------------EEFKNEIKLTAKLQHRNLVRLLGCC 507
LG GGFG V+++ + E+ E+K AKL+H +VR
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAW 72
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGW------------GARIRIIEGIAQGLL 555
+E+ + P L + KE L W + I IA+ +
Sbjct: 73 LEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVE 132
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT----------KR 605
+LH ++HRDLKPSNI + + K+ DFGL DE +
Sbjct: 133 FLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTG 189
Query: 606 IVGTYGYMSPEYAIHG-FFSIKSDVFSFGVLLLETL 640
VGT YMSPE IHG +S K D+FS G++L E L
Sbjct: 190 QVGTKLYMSPE-QIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 80 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 139
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 140 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 190
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 191 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 249
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 250 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 296
Query: 715 TNEF 718
+ F
Sbjct: 297 SAIF 300
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 52/230 (22%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LGEG FG V K S L + +E + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG------------------ 536
+ H ++++L G C + G +LI EY SL FL ++ K G
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 537 ---LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
L G I I+QG+ YL + ++++HRDL NIL+ KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 594 FGGDELQSNTKRIVG--TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
E S KR G +M+ E ++ +SDV+SFGVLL E ++
Sbjct: 200 VY--EEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 135 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 244
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 245 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
Query: 715 TNEF 718
+ F
Sbjct: 292 SAIF 295
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 97/230 (42%), Gaps = 52/230 (22%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LGEG FG V K S L + +E + +
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG------------------ 536
+ H ++++L G C + G +LI EY SL FL ++ K G
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 537 ---LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARM 593
L G I I+QG+ YL + S ++HRDL NIL+ KISDFGL+R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 594 FGGDELQSNTKRIVG--TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
E S KR G +M+ E ++ +SDV+SFGVLL E ++
Sbjct: 200 VY--EEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 136 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 186
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 245
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 246 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 292
Query: 715 TNEF 718
+ F
Sbjct: 293 SAIF 296
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 75 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 135 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 185
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 186 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 244
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 245 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 291
Query: 715 TNEF 718
+ F
Sbjct: 292 SAIF 295
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 73 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 133 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 183
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 184 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 242
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 243 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 289
Query: 715 TNEF 718
+ F
Sbjct: 290 SAIF 293
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 177
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 228
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 229 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 258
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 121/311 (38%), Gaps = 59/311 (18%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 6 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 65
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R +
Sbjct: 126 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 182
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHAW 661
+ + +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 183 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 242
Query: 662 NLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNL 721
L K D +++ + + +C Q N RP+ E+IS + E
Sbjct: 243 LLDKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEEM--- 283
Query: 722 PSPQQPGFSSL 732
+PGF +
Sbjct: 284 ----EPGFREV 290
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 201
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 252
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 253 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDTLCGTLDYLPP 176
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 227
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 228 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 257
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 74 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 133
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 134 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 190
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 128 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 187
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 188 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 244
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 EDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 180
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 231
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 232 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 198 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 257 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 298
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 299 -----EPGFREV 305
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 XSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 115/244 (47%), Gaps = 30/244 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFL----FDTTKEG 536
+ +F E + H N++ LLG C+ +G +++ Y+ + L +F+ + T +
Sbjct: 76 VSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L+G+G ++ A+G+ +L + + +HRDL N +LD K++DFGLAR
Sbjct: 136 LIGFGLQV------AKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLD 186
Query: 597 DELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E S N +M+ E F+ KSDV+SFGVLL E L ++ + + + N+
Sbjct: 187 KEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWE-LMTRGAPPYPDVNTF 245
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + + L+ P+ + Y V L C A RP+ SE++S +
Sbjct: 246 DITVYLL------QGRRLLQPEYCPDPLY-------EVMLKCWHPKAEMRPSFSELVSRI 292
Query: 715 TNEF 718
+ F
Sbjct: 293 SAIF 296
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 71 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 130
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 131 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 187
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 229
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 230 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 258
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 34/205 (16%)
Query: 463 VENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLG 505
+ ++G G FG VYK + + + F+NE+ + K +H N++ +G
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMG 99
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ ++ ++ SL L +E I I AQG+ YLH + +
Sbjct: 100 YMTKDNL-AIVTQWCEGSSLYKHLH--VQETKFQMFQLIDIARQTAQGMDYLHAKN---I 153
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLA----RMFGGDELQSNTKRIVGTYGYMSPE---YA 618
IHRD+K +NI L + KI DFGLA R G +++ T G+ +M+PE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT----GSVLWMAPEVIRMQ 209
Query: 619 IHGFFSIKSDVFSFGVLLLETLSSK 643
+ FS +SDV+S+G++L E ++ +
Sbjct: 210 DNNPFSFQSDVYSYGIVLYELMTGE 234
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 176
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 227
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 228 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 257
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 69 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 128
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 129 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKI 185
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 231
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 232 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 148
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 149 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRDDLCGTLDYLPP 201
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 252
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 253 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 282
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTXLCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 191 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 249
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 250 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 291
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 292 -----EPGFREV 298
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 139
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 140 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 192
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 243
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 244 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 273
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 191
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 192 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 250
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 251 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 292
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 293 -----EPGFREV 299
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 123
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 124 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPP 176
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 227
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 228 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 126
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 127 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 179
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 230
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 231 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 260
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLCGTLDYLPP 178
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 229
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 230 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P + L +K I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRXXLXGTLDYLPP 180
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 231
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 232 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 121
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 122 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 174
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 225
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 226 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 255
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 109/277 (39%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQGLEEF---------------------KNEIKLTAKL 495
A +F + LG+G FG VY + + +F + E+++ + L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 119
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 120 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 172
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 223
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 224 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 253
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 467 LGEGGFGPVY--------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ-G 511
+G+G FG V K+ + F E + +L+H NLV+LLG VE+ G
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 79
Query: 512 ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
++ EY+ SL +L + +LG ++ + + + YL + +HRDL
Sbjct: 80 GLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLA 135
Query: 572 PSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFS 631
N+L+ + + K+SDFGL + E S + +PE FS KSDV+S
Sbjct: 136 ARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 632 FGVLLLETLSSKR 644
FG+LL E S R
Sbjct: 191 FGILLWEIYSFGR 203
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 12 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 71
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 132 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 188
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 189 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 247
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 248 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 289
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 290 -----EPGFREV 296
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 244 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 285
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 286 -----EPGFREV 292
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 14 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 73
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 134 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 190
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 191 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 249
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 250 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 291
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 292 -----EPGFREV 298
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 34/198 (17%)
Query: 466 KLGEGGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+LG+G FG VYK S + LE++ EI++ A H +V+LLG
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
G+ ++ E+ P ++D+ + + + GL ++ + + + L +LH R+IH
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQV-VCRQMLEALNFLHSK---RIIH 132
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR--IVGTYGYMSPEYAI-----H 620
RDLK N+L+ +++DFG++ L++ KR +GT +M+PE +
Sbjct: 133 RDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 188
Query: 621 GFFSIKSDVFSFGVLLLE 638
+ K+D++S G+ L+E
Sbjct: 189 TPYDYKADIWSLGITLIE 206
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 34/198 (17%)
Query: 466 KLGEGGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+LG+G FG VYK S + LE++ EI++ A H +V+LLG
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
G+ ++ E+ P ++D+ + + + GL ++ + + + L +LH R+IH
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQV-VCRQMLEALNFLHSK---RIIH 140
Query: 568 RDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR--IVGTYGYMSPEYAI-----H 620
RDLK N+L+ +++DFG++ L++ KR +GT +M+PE +
Sbjct: 141 RDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCETMKD 196
Query: 621 GFFSIKSDVFSFGVLLLE 638
+ K+D++S G+ L+E
Sbjct: 197 TPYDYKADIWSLGITLIE 214
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P + L +K I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 231
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 232 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 261
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 120/311 (38%), Gaps = 59/311 (18%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 15 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 74
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R +
Sbjct: 135 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG 191
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHAW 661
+ + +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 192 GKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG 251
Query: 662 NLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNL 721
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 252 LLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM--- 292
Query: 722 PSPQQPGFSSL 732
+PGF +
Sbjct: 293 ----EPGFREV 299
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 43 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 102
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 163 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 219
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 220 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 278
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 279 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 320
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 321 -----EPGFREV 327
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGEN--------VLIYEYLPNKSLDSFLFDTTKEG 536
F+ E + A L H +V + GE ++ EY+ +L + EG
Sbjct: 59 FRREAQNAAALNHPAIV----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG- 595
+ I +I Q L + HQ +IHRD+KP+NI++ + K+ DFG+AR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 596 -GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G+ + + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 229
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 230 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 259
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGEN--------VLIYEYLPNKSLDSFLFDTTKEG 536
F+ E + A L H +V + GE ++ EY+ +L + EG
Sbjct: 59 FRREAQNAAALNHPAIV----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG- 595
+ I +I Q L + HQ +IHRD+KP+NI++ + K+ DFG+AR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 596 -GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G+ + + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 39/216 (18%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-------GLEEFK------------NEIKLTAKLQ 496
++++ F KLG G + VYK L+E K EI L +L+
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPN---KSLDSFLFDTTKEGLLGWGARIRIIE----G 549
H N+VRL + + L++E++ N K +DS T GL + +++
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGL-----ELNLVKYFQWQ 116
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT-KRIVG 608
+ QGL + H+ +++HRDLKP N+L++ K+ DFGLAR FG + NT V
Sbjct: 117 LLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG---IPVNTFSSEVV 170
Query: 609 TYGYMSPEYAIHG-FFSIKSDVFSFGVLLLETLSSK 643
T Y +P+ + +S D++S G +L E ++ K
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCC-VEQGENVLIY---EYLPNKSLDSFLFDTTKEGLLGW 540
F+ E + A L H +V + E L Y EY+ +L + EG +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEGPMTP 115
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG--GDE 598
I +I Q L + HQ +IHRD+KP+NI++ + K+ DFG+AR G+
Sbjct: 116 KRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
Query: 599 LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 173 V-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 112/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H +VIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 123 YCHSK---KVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRAALCGTLDYLPP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ + +K E P
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------DTYKRISRVEFTFP 226
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 227 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 256
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGEN--------VLIYEYLPNKSLDSFLFDTTKEG 536
F+ E + A L H +V + GE ++ EY+ +L + EG
Sbjct: 59 FRREAQNAAALNHPAIV----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG- 595
+ I +I Q L + HQ +IHRD+KP+NIL+ + K+ DFG+AR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD 168
Query: 596 -GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G+ + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-XQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGEN--------VLIYEYLPNKSLDSFLFDTTKEG 536
F+ E + A L H +V + GE ++ EY+ +L + EG
Sbjct: 59 FRREAQNAAALNHPAIV----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG- 595
+ I +I Q L + HQ +IHRD+KP+NI++ + K+ DFG+AR
Sbjct: 112 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 168
Query: 596 -GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G+ + + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 169 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 127
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI+DFG + S + GT Y+ P
Sbjct: 128 YCHSK---RVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTTLCGTLDYLPP 180
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 231
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 232 DFVTEGARDLISR-------LLKHNPSQRPXLREVL 260
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 467 LGEGGFGPVY--------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ-G 511
+G+G FG V K+ + F E + +L+H NLV+LLG VE+ G
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 260
Query: 512 ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
++ EY+ SL +L + +LG ++ + + + YL + +HRDL
Sbjct: 261 GLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLA 316
Query: 572 PSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFS 631
N+L+ + + K+SDFGL + Q K V + +PE FS KSDV+S
Sbjct: 317 ARNVLVSEDNVAKVSDFGLTKE--ASSTQDTGKLPV---KWTAPEALREKKFSTKSDVWS 371
Query: 632 FGVLLLETLSSKR 644
FG+LL E S R
Sbjct: 372 FGILLWEIYSFGR 384
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 129/294 (43%), Gaps = 54/294 (18%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKSG-------------------------QGLEEFKNEI 489
+ A N E ++G+GGFG V+K + +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 490 KLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEG 549
+ + L H N+V+L G ++ E++P L L D K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDS-----NMIPKISDFGLARMFGGDELQSNTK 604
IA G+ Y+ Q ++HRDL+ NI L S + K++DFGL++ + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVS 184
Query: 605 RIVGTYGYMSPEY--AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
++G + +M+PE A ++ K+D +SF ++L L+ + ++ + + N
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----N 240
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ ++ E + P + + R NV LC + RP S ++ L+
Sbjct: 241 MIRE----EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 124/312 (39%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 8 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 67
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-------GLLGWGAR 543
+ + ++VRLLG + ++I E + L S+L E
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I++ IA G+ YL+ + +HRDL N + + KI DFG+ R ++ D +
Sbjct: 128 IQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG 184
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 185 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + + +C Q N RP+ E+IS + E
Sbjct: 244 GLLDKPDNCPDML----------------LELMRMCWQYNPKMRPSFLEIISSIKEEM-- 285
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 286 -----EPGFREV 292
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 56/239 (23%)
Query: 461 FGVENK----LGEGGFGPVYKSGQGL--------------EEFKNEIKLTAKLQHRNLVR 502
FG++ K +G GGFG V+K+ + E+ + E+K AKL H N+V
Sbjct: 10 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVKALAKLDHVNIVH 69
Query: 503 LLGC------CVEQGENVL-IYEYLPNKSLDSFLFDTT----------KEGLLGWGARIR 545
GC E ++ L +Y P S +S T K L W + R
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 546 -----------IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
+ E I +G+ Y+H ++IHRDLKPSNI L KI DFGL
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIFLVDTKQVKIGDFGLVTSL 186
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL----SSKRSTRFF 649
D ++ +K GT YMSPE + + D+++ G++L E L ++ +++FF
Sbjct: 187 KNDGKRTRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF 242
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 182
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 183 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 236
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 237 LQGTHYSVQSDIWSMGLSLVE 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 467 LGEGGFGPVY--------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ-G 511
+G+G FG V K+ + F E + +L+H NLV+LLG VE+ G
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 73
Query: 512 ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
++ EY+ SL +L + +LG ++ + + + YL + +HRDL
Sbjct: 74 GLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLA 129
Query: 572 PSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFS 631
N+L+ + + K+SDFGL + E S + +PE FS KSDV+S
Sbjct: 130 ARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 632 FGVLLLETLSSKR 644
FG+LL E S R
Sbjct: 185 FGILLWEIYSFGR 197
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + +I
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVY-----KSGQGL-------------EEFKNEIK 490
+S+ SV + K+G+G G VY +GQ + E NEI
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGI 550
+ + ++ N+V L + E ++ EYL SL D E + G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCREC 125
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
Q L +LH +VIHRD+K NILL + K++DFG + QS +VGT
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTP 180
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSW 670
+M+PE + K D++S G++ +E + + + N N L A L + +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPL----RALYLIATNGTP 234
Query: 671 ELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSP 724
EL +P E I + ++N C++ + R + E +L ++F+ + P
Sbjct: 235 ELQNP----EKLSAIFRDFLN---RCLEMDVEKRGSAKE---LLQHQFLKIAKP 278
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 24/193 (12%)
Query: 467 LGEGGFGPVY--------------KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ-G 511
+G+G FG V K+ + F E + +L+H NLV+LLG VE+ G
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 88
Query: 512 ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
++ EY+ SL +L + +LG ++ + + + YL + +HRDL
Sbjct: 89 GLYIVTEYMAKGSLVDYL-RSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLA 144
Query: 572 PSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFS 631
N+L+ + + K+SDFGL + E S + +PE FS KSDV+S
Sbjct: 145 ARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 199
Query: 632 FGVLLLETLSSKR 644
FG+LL E S R
Sbjct: 200 FGILLWEIYSFGR 212
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 43/294 (14%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVY-----KSGQGL-------------EEFKNEIK 490
+S+ SV + K+G+G G VY +GQ + E NEI
Sbjct: 11 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 70
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGI 550
+ + ++ N+V L + E ++ EYL SL D E + G +
Sbjct: 71 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCREC 126
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
Q L +LH +VIHRD+K NILL + K++DFG + QS +VGT
Sbjct: 127 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSXMVGTP 181
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSW 670
+M+PE + K D++S G++ +E + + + N N L A L + +
Sbjct: 182 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPL----RALYLIATNGTP 235
Query: 671 ELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSP 724
EL +P E I + ++N C++ + R + E+I ++F+ + P
Sbjct: 236 ELQNP----EKLSAIFRDFLN---RCLEMDVEKRGSAKELIQ---HQFLKIAKP 279
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVE 195
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 88/183 (48%), Gaps = 30/183 (16%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLF---DTTKEGLL 538
E +E+K+ +L H N+V LLG C G LI+EY L ++L + E +
Sbjct: 93 EALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEI 152
Query: 539 GWGARIRIIE-----------------GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNM 581
+ + R+ E +A+G+ +L S +HRDL N+L+
Sbjct: 153 EYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGK 209
Query: 582 IPKISDFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
+ KI DFGLAR D ++ N + V +M+PE G ++IKSDV+S+G+LL E
Sbjct: 210 VVKICDFGLARDIMSDSNYVVRGNARLPVK---WMAPESLFEGIYTIKSDVWSYGILLWE 266
Query: 639 TLS 641
S
Sbjct: 267 IFS 269
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVE 195
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 132/288 (45%), Gaps = 62/288 (21%)
Query: 467 LGEGGFGPVYKSGQGL--EEF----------KN--------EIKLTAKLQHRNLVRLLGC 506
LG+G FG V K + +E+ KN E++L KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ ++ E L FD K RII+ + G+ Y+H+++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 566 IHRDLKPSNILLDSNMIP---KISDFGLARMFGGDELQSNTKRI--VGTYGYMSPEYAIH 620
+HRDLKP NILL+S KI DFGL+ F Q NTK +GT Y++PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 621 GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL------GHAWNL--WK--DDRSW 670
G + K DV+S GV+L LS + F+ N +L +A++L W+ D +
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAK 254
Query: 671 ELMDPKLQCEASYPIVKRYINVALLC-----VQENAADRPTMSEVISM 713
+L+ L S I A C +Q+ +++ PT+S++ S+
Sbjct: 255 DLIRKMLTFHPSLRI------TATQCLEHPWIQKYSSETPTISDLPSL 296
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 80
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD----TTKEGLLGWGARIRI 546
+ + ++VRLLG + ++I E + L S+L +L + ++
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 547 IE---GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I+ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 141 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 197
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 198 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 257 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 298
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 299 -----EPGFREV 305
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVE 195
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 115/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
L H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 105 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 217
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 270
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 271 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 314
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGEN--------VLIYEYLPNKSLDSFLFDTTKEG 536
F+ E + A L H +V + GE ++ EY+ +L + EG
Sbjct: 76 FRREAQNAAALNHPAIV----AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVH---TEG 128
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG- 595
+ I +I Q L + HQ +IHRD+KP+NI++ + K+ DFG+AR
Sbjct: 129 PMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD 185
Query: 596 -GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G+ + + T ++GT Y+SPE A +SDV+S G +L E L+ +
Sbjct: 186 SGNSV-TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVY-----KSGQGL-------------EEFKNEIK 490
+S+ SV + K+G+G G VY +GQ + E NEI
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGI 550
+ + ++ N+V L + E ++ EYL SL D E + G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCREC 125
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
Q L +LH +VIHRD+K NILL + K++DFG + QS +VGT
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSEMVGTP 180
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSW 670
+M+PE + K D++S G++ +E + + + N N L A L + +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPL----RALYLIATNGTP 234
Query: 671 ELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSP 724
EL +P E I + ++N C+ + R + E +L ++F+ + P
Sbjct: 235 ELQNP----EKLSAIFRDFLN---RCLDMDVEKRGSAKE---LLQHQFLKIAKP 278
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 127/312 (40%), Gaps = 61/312 (19%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKS-GQGLE-----------------------EFKNEIK 490
A + +LG+G FG VY+ +G+ EF NE
Sbjct: 11 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 70
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD----TTKEGLLGWGARIRI 546
+ + ++VRLLG + ++I E + L S+L +L + ++
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 547 IE---GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSN 602
I+ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++ D +
Sbjct: 131 IQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG 187
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSLTLLGHA 660
K ++ +MSPE G F+ SDV+SFGV+L E TL+ + N L +
Sbjct: 188 GKGLLPVR-WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 246
Query: 661 WNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVN 720
L K D +++ + +C Q N RP+ E+IS + E
Sbjct: 247 GLLDKPDNCPDML----------------FELMRMCWQYNPKMRPSFLEIISSIKEEM-- 288
Query: 721 LPSPQQPGFSSL 732
+PGF +
Sbjct: 289 -----EPGFREV 295
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 137
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 139
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 140 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMT 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 60 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 119
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 120 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 176
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 136
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 137 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 83
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 84 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 136
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 137 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKS----------------------GQGLEEFKNE--IKLT 492
A + ++GEG +G V+K+ G L + ++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 493 AKLQHRNLVRLLGCCV-----EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
+H N+VRL C + + L++E++ ++ L ++L + G+ + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIV 607
+ + +GL +LH + RV+HRDLKP NIL+ S+ K++DFGLAR++ Q +V
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVV 180
Query: 608 GTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F ++ + LG ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 64 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 123
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 124 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 180
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 181 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 86 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 138
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMT 217
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 115/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
L H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 91 LNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 203
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 256
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 257 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 300
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 135 FSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 192 ADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 76
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 77 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 129
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 130 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMT 208
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 106/235 (45%), Gaps = 48/235 (20%)
Query: 441 SMETKTQGKSLASVSAATNNFGVE-----NKLGEGGFGPVYKSGQG------------LE 483
++E +TQG SVSAA + ++ KLGEG +G VYK+ LE
Sbjct: 11 TLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE 70
Query: 484 EFKN--------EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE 535
+ E+ L +LQHRN++ L LI+EY N D K
Sbjct: 71 HEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN--------DLKKY 122
Query: 536 GLLGWGARIRIIEG----IAQGLLYLHQYSRLRVIHRDLKPSNILL---DSNMIP--KIS 586
+R+I+ + G+ + H SR R +HRDLKP N+LL D++ P KI
Sbjct: 123 MDKNPDVSMRVIKSFLYQLINGVNFCH--SR-RCLHRDLKPQNLLLSVSDASETPVLKIG 179
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG-FFSIKSDVFSFGVLLLETL 640
DFGLAR F G ++ T I+ T Y PE + +S D++S + E L
Sbjct: 180 DFGLARAF-GIPIRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 92
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 93 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 145
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 146 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMT 224
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 67 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 126
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 127 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 183
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 184 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVE 195
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 121 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 174
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 175 LQGTHYSVQSDIWSMGLSLVE 195
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 20 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 79
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 80 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEGMNYLED 132
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 133 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMT 211
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 68 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 127
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 128 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 184
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 185 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 139
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 140 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 193
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 194 LQGTHYSVQSDIWSMGLSLVE 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 111/276 (40%), Gaps = 47/276 (17%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 124
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI++FG + S + GT Y+ P
Sbjct: 125 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 177
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 228
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
E + ++ R ++ N + RP + EV+
Sbjct: 229 DFVTEGARDLISR-------LLKHNPSQRPMLREVL 257
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 134
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 135 YCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 75 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLE 134
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 135 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 191
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 138
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 138
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMT 217
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 88
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 89 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 141
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 142 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMT 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 137
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMT 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 111/277 (40%), Gaps = 47/277 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKL 495
A +F + LG+G FG VY + + G+E + + E+++ + L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 496 QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
+H N++RL G + LI EY P L + + K I +A L
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
Y H RVIHRD+KP N+LL S KI++FG + S + GT Y+ P
Sbjct: 126 YCHSK---RVIHRDIKPENLLLGSAGELKIANFG----WSVHAPSSRRTTLCGTLDYLPP 178
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDP 675
E K D++S GVL E L K F N+ +K E P
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPP---FEANTYQ------ETYKRISRVEFTFP 229
Query: 676 KLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ N + RP + EV+
Sbjct: 230 DFVTEGARDLISR-------LLKHNPSQRPMLREVLE 259
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 85
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 86 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 138
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 139 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMT 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVY-----KSGQGL-------------EEFKNEIK 490
+S+ SV + K+G+G G VY +GQ + E NEI
Sbjct: 10 RSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEIL 69
Query: 491 LTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGI 550
+ + ++ N+V L + E ++ EYL SL D E + G +
Sbjct: 70 VMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCREC 125
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
Q L +LH +VIHRD+K NILL + K++DFG + QS +VGT
Sbjct: 126 LQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTP 180
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSW 670
+M+PE + K D++S G++ +E + + + N N L A L + +
Sbjct: 181 YWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPL----RALYLIATNGTP 234
Query: 671 ELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSP 724
EL +P E I + ++N C+ + R + E +L ++F+ + P
Sbjct: 235 ELQNP----EKLSAIFRDFLN---RCLDMDVEKRGSAKE---LLQHQFLKIAKP 278
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRL 116
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 117 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 169
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 170 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMT 248
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEY--------LPNKSLDSFLFDTT 533
E +E+K+ + L H N+V LLG C G ++I EY + DSF+ T
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 534 KEGLLGWGARIRIIEG-------IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
++ +E +A+G+ +L + IHRDL NILL I KI
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 587 DFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
DFGLAR D ++ N + V +M+PE + ++ +SDV+S+G+ L E S
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 644 RSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAAD 703
S + + + + K+ + ++ P+ Y I+K C +
Sbjct: 268 SSPY----PGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLK 314
Query: 704 RPTMSEVISMLTNE 717
RPT +++ ++ +
Sbjct: 315 RPTFKQIVQLIEKQ 328
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 107
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 108 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 160
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 161 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMT 239
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 108/240 (45%), Gaps = 41/240 (17%)
Query: 455 SAATNNFGVENKLGEGGFGPVYK-----SGQ--GLEEFK----------------NEIKL 491
S AT+ + ++G G +G VYK SG L+ + E+ L
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 492 TAKLQ---HRNLVRLLGCCVEQGEN-----VLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+L+ H N+VRL+ C + L++E++ ++ L ++L GL +
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK 123
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
++ +GL +LH ++HRDLKP NIL+ S K++DFGLAR++ Q
Sbjct: 124 -DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMAL 176
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
+V T Y +PE + ++ D++S G + E +R F + LG ++L
Sbjct: 177 TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 234
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 38/235 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYK-----SGQ--GLEEFK-------------NEIKLTAKLQ 496
AT+ + ++G G +G VYK SG L+ + E+ L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 497 ---HRNLVRLLGCCVEQGEN-----VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
H N+VRL+ C + L++E++ ++ L ++L GL + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
+GL +LH ++HRDLKP NIL+ S K++DFGLAR++ Q +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALDPVVV 173
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F + LG ++L
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKS----------------------GQGLEEFKNE--IKLT 492
A + ++GEG +G V+K+ G L + ++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 493 AKLQHRNLVRLLGCCV-----EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
+H N+VRL C + + L++E++ ++ L ++L + G+ + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIV 607
+ + +GL +LH + RV+HRDLKP NIL+ S+ K++DFGLAR++ Q +V
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVV 180
Query: 608 GTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F ++ + LG ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 147
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YMSPE
Sbjct: 148 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMSPER 201
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 202 LQGTHYSVQSDIWSMGLSLVE 222
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 142
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMT 221
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 38/235 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYK-----SGQ--GLEEFK-------------NEIKLTAKLQ 496
AT+ + ++G G +G VYK SG L+ + E+ L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 497 ---HRNLVRLLGCCVEQGEN-----VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
H N+VRL+ C + L++E++ ++ L ++L GL + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
+GL +LH ++HRDLKP NIL+ S K++DFGLAR++ Q +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALAPVVV 173
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F + LG ++L
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 20/245 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTT--- 533
K ++E EI+ ++ H N+V V + E L+ + L S+ +
Sbjct: 47 KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 106
Query: 534 --KEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA 591
K G+L I+ + +GL YLH+ + IHRD+K NILL + +I+DFG++
Sbjct: 107 EHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 163
Query: 592 RMF--GGDELQSNTKR-IVGTYGYMSPEY--AIHGFFSIKSDVFSFGVLLLETLSSKRST 646
GGD ++ ++ VGT +M+PE + G + K+D++SFG+ +E +
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPY 222
Query: 647 RFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
+ + +L L D S E + Y K + + LC+Q++ RPT
Sbjct: 223 HKYPPMKVLML----TLQNDPPSLETGVQDKEMLKKYG--KSFRKMISLCLQKDPEKRPT 276
Query: 707 MSEVI 711
+E++
Sbjct: 277 AAELL 281
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 111/276 (40%), Gaps = 49/276 (17%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKLQH 497
+F + LG+G FG VY + + G+E + + E+++ + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N++RL G + LI EY P L + + K I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
H RVIHRD+KP N+LL SN KI+DFG + S + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 618 AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN-LWKDDRSWELMDPK 676
K D++S GVL E F H + ++ E P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYE----------FLVGMPPFEAHTYQETYRRISRVEFTFPD 231
Query: 677 LQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ NA+ R T++EV+
Sbjct: 232 FVTEGARDLISR-------LLKHNASQRLTLAEVLE 260
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL- 537
+ L + +E+++ + +H+N++ LLG C + G +I EY +L +L GL
Sbjct: 116 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLE 175
Query: 538 ------------LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L + +A+G+ YL + + IHRDL N+L+ + + KI
Sbjct: 176 YSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKI 232
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVLL E +
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 111/276 (40%), Gaps = 49/276 (17%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ--------------------GLE-EFKNEIKLTAKLQH 497
+F + LG+G FG VY + + G+E + + E+++ + L+H
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N++RL G + LI EY P L + + K I +A L Y
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAP---LGTVYRELQKLSRFDEQRTATYITELANALSYC 128
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
H RVIHRD+KP N+LL SN KI+DFG + S + GT Y+ PE
Sbjct: 129 HSK---RVIHRDIKPENLLLGSNGELKIADFG----WSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 618 AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN-LWKDDRSWELMDPK 676
K D++S GVL E F H + ++ E P
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYE----------FLVGMPPFEAHTYQETYRRISRVEFTFPD 231
Query: 677 LQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
E + ++ R ++ NA+ R T++EV+
Sbjct: 232 FVTEGARDLISR-------LLKHNASQRLTLAEVLE 260
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 108/236 (45%), Gaps = 39/236 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYKS----------------------GQGLEEFKNE--IKLT 492
A + ++GEG +G V+K+ G L + ++
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 493 AKLQHRNLVRLLGCCV-----EQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
+H N+VRL C + + L++E++ ++ L ++L + G+ + +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF 127
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIV 607
+ + +GL +LH + RV+HRDLKP NIL+ S+ K++DFGLAR++ Q +V
Sbjct: 128 Q-LLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS---FQMALTSVV 180
Query: 608 GTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F ++ + LG ++
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF--RRKPLFRGSSDVDQLGKILDV 234
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I Y +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 41/217 (18%)
Query: 467 LGEGGFGPVYKSGQGL--EEF----------KN--------EIKLTAKLQHRNLVRLLGC 506
LG+G FG V K + +E+ KN E++L KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ ++ E L FD K RII+ + G+ Y+H+++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 566 IHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRI--VGTYGYMSPEYAIH 620
+HRDLKP NILL+S + KI DFGL+ F Q NTK +GT Y++PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 621 GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
G + K DV+S GV+L LS + F+ N +L
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 28/196 (14%)
Query: 466 KLGEGGFGPVYKSGQ------GLEEFK-------------NEIKLTAKLQHRNLVRLLGC 506
K+GEG +G VYK+ L++ + EI + +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVI 566
+ VL++E+L ++ L L D + GL A+ +++ + G+ Y H RV+
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR---RVL 122
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HGFFSI 625
HRDLKP N+L++ KI+DFGLAR F G ++ T IV T Y +P+ + +S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIV-TLWYRAPDVLMGSKKYST 180
Query: 626 KSDVFSFGVLLLETLS 641
D++S G + E ++
Sbjct: 181 TIDIWSVGCIFAEMVN 196
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 113/245 (46%), Gaps = 20/245 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTT--- 533
K ++E EI+ ++ H N+V V + E L+ + L S+ +
Sbjct: 52 KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 111
Query: 534 --KEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA 591
K G+L I+ + +GL YLH+ + IHRD+K NILL + +I+DFG++
Sbjct: 112 EHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVS 168
Query: 592 RMF--GGDELQSNTKR-IVGTYGYMSPEY--AIHGFFSIKSDVFSFGVLLLETLSSKRST 646
GGD ++ ++ VGT +M+PE + G + K+D++SFG+ +E +
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPY 227
Query: 647 RFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
+ + +L L D S E + Y K + + LC+Q++ RPT
Sbjct: 228 HKYPPMKVLML----TLQNDPPSLETGVQDKEMLKKYG--KSFRKMISLCLQKDPEKRPT 281
Query: 707 MSEVI 711
+E++
Sbjct: 282 AAELL 286
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 102/217 (47%), Gaps = 41/217 (18%)
Query: 467 LGEGGFGPVYKSGQGL--EEF----------KN--------EIKLTAKLQHRNLVRLLGC 506
LG+G FG V K + +E+ KN E++L KL H N+++L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ ++ E L FD K RII+ + G+ Y+H+++ +
Sbjct: 90 LEDSSSFYIVGELYTGGEL----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHN---I 142
Query: 566 IHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRI--VGTYGYMSPEYAIH 620
+HRDLKP NILL+S + KI DFGL+ F Q NTK +GT Y++PE +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCF-----QQNTKMKDRIGTAYYIAPE-VLR 196
Query: 621 GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
G + K DV+S GV+L LS + F+ N +L
Sbjct: 197 GTYDEKCDVWSAGVILYILLSG--TPPFYGKNEYDIL 231
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 54/294 (18%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKSG-------------------------QGLEEFKNEI 489
+ A N E ++G+GGFG V+K + +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 490 KLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEG 549
+ + L H N+V+L G ++ E++P L L D K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDS-----NMIPKISDFGLARMFGGDELQSNTK 604
IA G+ Y+ Q ++HRDL+ NI L S + K++DFG ++ + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVS 184
Query: 605 RIVGTYGYMSPEY--AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
++G + +M+PE A ++ K+D +SF ++L L+ + ++ + + N
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----N 240
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ ++ E + P + + R NV LC + RP S ++ L+
Sbjct: 241 MIRE----EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + A L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEY--------LPNKSLDSFLFDTT 533
E +E+K+ + L H N+V LLG C G ++I EY + DSF+ T
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 130
Query: 534 KEGLLGWGARIRIIEG-------IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
++ +E +A+G+ +L + IHRDL NILL I KI
Sbjct: 131 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 187
Query: 587 DFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
DFGLAR D ++ N + V +M+PE + ++ +SDV+S+G+ L E S
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 244
Query: 644 RSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAAD 703
S + + + + K+ + ++ P+ Y I+K C +
Sbjct: 245 SSPY----PGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLK 291
Query: 704 RPTMSEVISMLTNE 717
RPT +++ ++ +
Sbjct: 292 RPTFKQIVQLIEKQ 305
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 95/201 (47%), Gaps = 32/201 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQ---GLEEFKNEIKLTAKLQHRN---------------- 499
++F ++LG G G V+K GL + I L K RN
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + E +LG ++ + +GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYL 123
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + VGT YMSPE
Sbjct: 124 RE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDEMANEFVGTRSYMSPER 177
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 178 LQGTHYSVQSDIWSMGLSLVE 198
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEY--------LPNKSLDSFLFDTT 533
E +E+K+ + L H N+V LLG C G ++I EY + DSF+ T
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 153
Query: 534 KEGLLGWGARIRIIEG-------IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
++ +E +A+G+ +L + IHRDL NILL I KI
Sbjct: 154 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 210
Query: 587 DFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
DFGLAR D ++ N + V +M+PE + ++ +SDV+S+G+ L E S
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 267
Query: 644 RSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAAD 703
S + + + + K+ + ++ P+ Y I+K C +
Sbjct: 268 SSPY----PGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLK 314
Query: 704 RPTMSEVISMLTNE 717
RPT +++ ++ +
Sbjct: 315 RPTFKQIVQLIEKQ 328
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 7/159 (4%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E ++ + H N+VRL+G C ++ ++ E + +FL T+ L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTL 215
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQSN 602
++++ A G+ YL IHRDL N L+ + KISDFG++R G S
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASG 272
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
R V + +PE +G +S +SDV+SFG+LL ET S
Sbjct: 273 GLRQVPV-KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 104
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 217
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 270
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 271 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 203
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 256
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 257 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 300
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 202
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 255
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 256 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 299
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 38/254 (14%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEY--------LPNKSLDSFLFDTT 533
E +E+K+ + L H N+V LLG C G ++I EY + DSF+ T
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 148
Query: 534 KEGLLGWGARIRIIEG-------IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
++ +E +A+G+ +L + IHRDL NILL I KI
Sbjct: 149 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 205
Query: 587 DFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
DFGLAR D ++ N + V +M+PE + ++ +SDV+S+G+ L E S
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 262
Query: 644 RSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAAD 703
S + + + + K+ + ++ P+ Y I+K C +
Sbjct: 263 SSPY----PGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLK 309
Query: 704 RPTMSEVISMLTNE 717
RPT +++ ++ +
Sbjct: 310 RPTFKQIVQLIEKQ 323
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 29/200 (14%)
Query: 462 GVENKLGEGGFGPVYKSGQ------GLEEFK-------------NEIKLTAKLQHRNLVR 502
G+E K+GEG +G VYK+ L++ + EI + +L+H N+V+
Sbjct: 6 GLE-KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVK 64
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSR 562
L + VL++E+L ++ L L D + GL A+ +++ + G+ Y H
Sbjct: 65 LYDVIHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR-- 119
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HG 621
RV+HRDLKP N+L++ KI+DFGLAR F G ++ T +V T Y +P+ +
Sbjct: 120 -RVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSK 176
Query: 622 FFSIKSDVFSFGVLLLETLS 641
+S D++S G + E ++
Sbjct: 177 KYSTTIDIWSVGCIFAEMVN 196
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 38/255 (14%)
Query: 483 EEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEY--------LPNKSLDSFLFDTT 533
E +E+K+ + L H N+V LLG C G ++I EY + DSF+ T
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKT 146
Query: 534 KEGLLGWGARIRIIEG-------IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
++ +E +A+G+ +L + IHRDL NILL I KI
Sbjct: 147 SPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKIC 203
Query: 587 DFGLARMFGGDE---LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
DFGLAR D ++ N + V +M+PE + ++ +SDV+S+G+ L E S
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPV---KWMAPESIFNCVYTFESDVWSYGIFLWELFSLG 260
Query: 644 RSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAAD 703
S + + + + K+ + ++ P+ Y I+K C +
Sbjct: 261 SSPY----PGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMKT-------CWDADPLK 307
Query: 704 RPTMSEVISMLTNEF 718
RPT +++ ++ +
Sbjct: 308 RPTFKQIVQLIEKQI 322
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 89
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 90 FNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 149
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 150 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 202
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 203 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 255
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 256 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 299
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 65 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFG 595
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++
Sbjct: 125 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 181
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNS 653
D + K ++ +M+PE G F+ SD++SFGV+L E +L+ + N
Sbjct: 182 TDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 240
Query: 654 LTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISM 713
L + L + D E R ++ +C Q N RPT E++++
Sbjct: 241 LKFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNL 284
Query: 714 LTNEF 718
L ++
Sbjct: 285 LKDDL 289
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 22 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 81
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 82 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 141
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 142 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 194
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 195 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 247
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 248 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 291
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 100/196 (51%), Gaps = 28/196 (14%)
Query: 466 KLGEGGFGPVYKSGQ------GLEEFK-------------NEIKLTAKLQHRNLVRLLGC 506
K+GEG +G VYK+ L++ + EI + +L+H N+V+L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 507 CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVI 566
+ VL++E+L ++ L L D + GL A+ +++ + G+ Y H RV+
Sbjct: 69 IHTKKRLVLVFEHL-DQDLKKLL-DVCEGGLESVTAKSFLLQ-LLNGIAYCHDR---RVL 122
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HGFFSI 625
HRDLKP N+L++ KI+DFGLAR F G ++ T +V T Y +P+ + +S
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVV-TLWYRAPDVLMGSKKYST 180
Query: 626 KSDVFSFGVLLLETLS 641
D++S G + E ++
Sbjct: 181 TIDIWSVGCIFAEMVN 196
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 45 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISK 104
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 105 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 164
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 165 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 217
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 218 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 270
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 271 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 314
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSL 654
+ + + +M+PE G F+ SD++SFGV+L E +L+ + N L
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ L + D E R ++ +C Q N RPT E++++L
Sbjct: 243 KFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 715 TNEF 718
++
Sbjct: 287 KDDL 290
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 37 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 96
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 97 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 156
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 157 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 209
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 210 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 262
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 263 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 306
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSL 654
+ + + +M+PE G F+ SD++SFGV+L E +L+ + N L
Sbjct: 180 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ L + D E R ++ +C Q N RPT E++++L
Sbjct: 240 KFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLL 283
Query: 715 TNEF 718
++
Sbjct: 284 KDDL 287
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 17/176 (9%)
Query: 480 QGLEEFKNEIKLTAKL-QHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL--------- 529
+ L + +E+++ + +H+N++ LLG C + G +I Y +L +L
Sbjct: 82 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGME 141
Query: 530 --FDTTK--EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
+D + E + + + +A+G+ YL + + IHRDL N+L+ N + KI
Sbjct: 142 YSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKI 198
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+DFGLAR + T +M+PE ++ +SDV+SFGVL+ E +
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFG 595
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNS 653
D + K ++ +M+PE G F+ SD++SFGV+L E +L+ + N
Sbjct: 183 TDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 654 LTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISM 713
L + L + D E R ++ +C Q N RPT E++++
Sbjct: 242 LKFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 714 LTNEF 718
L ++
Sbjct: 286 LKDDL 290
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 128/294 (43%), Gaps = 54/294 (18%)
Query: 455 SAATNNFGVENKLGEGGFGPVYKSG-------------------------QGLEEFKNEI 489
+ A N E ++G+GGFG V+K + +EF+ E+
Sbjct: 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREV 74
Query: 490 KLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEG 549
+ + L H N+V+L G ++ E++P L L D K + W ++R++
Sbjct: 75 FIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLD 130
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDS-----NMIPKISDFGLARMFGGDELQSNTK 604
IA G+ Y+ Q ++HRDL+ NI L S + K++DF L++ + +
Sbjct: 131 IALGIEYM-QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVS 184
Query: 605 RIVGTYGYMSPEY--AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
++G + +M+PE A ++ K+D +SF ++L L+ + ++ + + N
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFI----N 240
Query: 663 LWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTN 716
+ ++ E + P + + R NV LC + RP S ++ L+
Sbjct: 241 MIRE----EGLRPTIPEDCP----PRLRNVIELCWSGDPKKRPHFSYIVKELSE 286
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 113/291 (38%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 130
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 131 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 190
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D ++ R
Sbjct: 191 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKG 243
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 244 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 296
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 297 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 340
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 113/291 (38%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 48 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 107
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 108 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 167
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D ++ R
Sbjct: 168 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKG 220
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 221 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 273
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 274 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 317
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 38/235 (16%)
Query: 457 ATNNFGVENKLGEGGFGPVYK-----SGQ--GLEEFK-------------NEIKLTAKLQ 496
AT+ + ++G G +G VYK SG L+ + E+ L +L+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 497 ---HRNLVRLLGCCVEQGEN-----VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
H N+VRL+ C + L++E++ ++ L ++L GL + ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIK-DLMR 119
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVG 608
+GL +LH ++HRDLKP NIL+ S K++DFGLAR++ Q +V
Sbjct: 120 QFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS---YQMALFPVVV 173
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
T Y +PE + ++ D++S G + E +R F + LG ++L
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF--RRKPLFCGNSEADQLGKIFDL 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 448 GKSLASVSAATNNFGVENKLGEGGFGPVYK-------------------SGQGLEEFKNE 488
G+S + + + ++ +LG GGFG V + S + E + E
Sbjct: 4 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE 63
Query: 489 IKLTAKLQHRNLVRL------LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
I++ KL H N+V L +L EY L +L L G
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 123
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDEL 599
++ I+ L YLH+ R+IHRDLKP NI+L +I KI D G A+ EL
Sbjct: 124 IRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 180
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKR 644
+ VGT Y++PE +++ D +SFG L E ++ R
Sbjct: 181 CTE---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 222
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 448 GKSLASVSAATNNFGVENKLGEGGFGPVYK-------------------SGQGLEEFKNE 488
G+S + + + ++ +LG GGFG V + S + E + E
Sbjct: 3 GRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE 62
Query: 489 IKLTAKLQHRNLVRL------LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
I++ KL H N+V L +L EY L +L L G
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDEL 599
++ I+ L YLH+ R+IHRDLKP NI+L +I KI D G A+ EL
Sbjct: 123 IRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGEL 179
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKR 644
+ VGT Y++PE +++ D +SFG L E ++ R
Sbjct: 180 CTE---FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFR 221
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 5/158 (3%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+F E ++ + H N+VRL+G C ++ ++ E + +FL T+ L
Sbjct: 158 KFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL--RTEGARLRVKTL 215
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
++++ A G+ YL IHRDL N L+ + KISDFG++R ++
Sbjct: 216 LQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ +PE +G +S +SDV+SFG+LL ET S
Sbjct: 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 28/244 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSL 654
+ + + +M+PE G F+ SD++SFGV+L E +L+ + N L
Sbjct: 183 TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ L + D E R ++ +C Q N RPT E++++L
Sbjct: 243 KFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNLL 286
Query: 715 TNEF 718
++
Sbjct: 287 KDDL 290
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 47 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 106
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 107 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 166
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 167 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 219
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 220 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 272
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 273 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 316
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 57 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 116
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 117 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 176
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+AR D +++ R
Sbjct: 177 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKG 229
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 230 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 282
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 283 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 326
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 39/205 (19%)
Query: 470 GGFGPVYKSG-------------QGLEEFKNEIKLTA--KLQHRNLVRLLGCCVEQGENV 514
G FG V+K+ Q + ++NE ++ + ++H N+++ +G ++G +V
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGA-EKRGTSV 93
Query: 515 -----LIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQY-------SR 562
LI + SL FL K ++ W I E +A+GL YLH+ +
Sbjct: 94 DVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF 622
+ HRD+K N+LL +N+ I+DFGLA F + +T VGT YM+PE + G
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGA 208
Query: 623 FSIKSDVF------SFGVLLLETLS 641
+ + D F + G++L E S
Sbjct: 209 INFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 45/227 (19%)
Query: 461 FGVENK----LGEGGFGPVYKSGQGL--------------EEFKNEIKLTAKLQHRNLVR 502
FG++ K +G GGFG V+K+ + E+ + E+K AKL H N+V
Sbjct: 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVH 68
Query: 503 LLGC---------------CVEQGENVLI-YEYLPNKSLDSFLFDTTKEGLLGWGARIRI 546
GC + + + I E+ +L+ ++ E L A + +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA-LEL 127
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI 606
E I +G+ Y+H ++I+RDLKPSNI L KI DFGL D + +K
Sbjct: 128 FEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK-- 182
Query: 607 VGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL----SSKRSTRFF 649
GT YMSPE + + D+++ G++L E L ++ +++FF
Sbjct: 183 -GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFF 228
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 13/141 (9%)
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK--EGLLGWGARIRIIEGIAQGLLYL 557
+V G GE + E++ SLD L + + E +LG ++ + +GL YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYL 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ + +++HRD+KPSNIL++S K+ DFG++ G + S VGT YM+PE
Sbjct: 131 RE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS----GQLIDSMANSFVGTRSYMAPER 184
Query: 618 AIHGFFSIKSDVFSFGVLLLE 638
+S++SD++S G+ L+E
Sbjct: 185 LQGTHYSVQSDIWSMGLSLVE 205
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 86
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 87 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 139
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 140 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMT 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 99/199 (49%), Gaps = 34/199 (17%)
Query: 467 LGEGGFGPVYKSGQ-------GLEEFK----------------NEIKLTAKLQHRNLVRL 503
LGEG F VYK+ +++ K EIKL +L H N++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIA-QGLLYLHQYSR 562
L + L+++++ L+ + D + L+ + I+ + QGL YLHQ+
Sbjct: 78 LDAFGHKSNISLVFDFM-ETDLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQHW- 132
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG- 621
++HRDLKP+N+LLD N + K++DFGLA+ FG ++ ++V T Y +PE
Sbjct: 133 --ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN-RAYXHQVV-TRWYRAPELLFGAR 188
Query: 622 FFSIKSDVFSFGVLLLETL 640
+ + D+++ G +L E L
Sbjct: 189 MYGVGVDMWAVGCILAELL 207
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 23/199 (11%)
Query: 461 FGVENKLGEGGFGPVYK-----SGQ-----------GLEEFKNEIKLTAKLQHRNLVRLL 504
F V KLGEG +G VYK +GQ L+E EI + + ++V+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G + + ++ EY S+ + + L I++ +GL YLH +R
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSDII--RLRNKTLTEDEIATILQSTLKGLEYLH---FMR 145
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
IHRD+K NILL++ K++DFG+A + N ++GT +M+PE ++
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX--VIGTPFWMAPEVIQEIGYN 203
Query: 625 IKSDVFSFGVLLLETLSSK 643
+D++S G+ +E K
Sbjct: 204 CVADIWSLGITAIEMAEGK 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 137
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 39/233 (16%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPV---YKSGQGLE------------------EFKN 487
KS + A N+ + LGEG FG V Y + G + +
Sbjct: 3 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 62
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
EI L+H ++++L + E +++ EY N+ D + ++ + AR R
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD---YIVQRDKMSEQEAR-RFF 118
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSNTKRI 606
+ I + Y H++ +++HRDLKP N+LLD ++ KI+DFGL+ M G+ L+++
Sbjct: 119 QQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 172
Query: 607 VGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
G+ Y +PE I G + + DV+S GV+L L + F+ S+ +L
Sbjct: 173 -GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP---FDDESIPVL 220
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
++N+ V+ +LG+G F V + S + ++ + E ++ KLQH
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+ + L+++ + L D I+ I + + Y
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HR+LKP N+LL S K++DFGLA E GT GY+S
Sbjct: 121 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 174
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE +S D+++ GV+L
Sbjct: 175 PEVLKKDPYSKPVDIWACGVIL 196
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
L G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 137
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
L G FG VYK S + +E +E + A + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 90 LGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 142
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMT 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 48 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 103
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 104 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 159
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 160 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 110/233 (47%), Gaps = 39/233 (16%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPV---YKSGQGLE------------------EFKN 487
KS + A N+ + LGEG FG V Y + G + +
Sbjct: 4 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 63
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
EI L+H ++++L + E +++ EY N+ D + ++ + AR R
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD---YIVQRDKMSEQEAR-RFF 119
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSNTKRI 606
+ I + Y H++ +++HRDLKP N+LLD ++ KI+DFGL+ M G+ L+++
Sbjct: 120 QQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC--- 173
Query: 607 VGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
G+ Y +PE I G + + DV+S GV+L L + F+ S+ +L
Sbjct: 174 -GSPNYAAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP---FDDESIPVL 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
++N+ V+ +LG+G F V + S + ++ + E ++ KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+ + L+++ + L D I+ I + + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HR+LKP N+LL S K++DFGLA E GT GY+S
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 175
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE +S D+++ GV+L
Sbjct: 176 PEVLKKDPYSKPVDIWACGVIL 197
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 82
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 83 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 135
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 136 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMT 214
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 453 SVSAATNNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKL 491
S + ++ + + LG+G FG V K E E++L
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 492 TAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIA 551
+L H N+++L ++G L+ E L + + + RII +
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVL 136
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVG 608
G+ Y+H+ +++HRDLKP N+LL+S + +I DFGL+ F E K +G
Sbjct: 137 SGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIG 190
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T Y++PE +HG + K DV+S GV+L LS
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 33/248 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL---DSFLF--DTTKEGL 537
++FKNE+++ +++ + G E +IYEY+ N S+ D + F D
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
+ II+ + Y+H + + HRD+KPSNIL+D N K+SDFG +
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIH--NEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
Query: 598 ELQSNTKRIVGTYGYMSPEYAIH--GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLT 655
+++ + GTY +M PE+ + + K D++S G+ L F+N +
Sbjct: 206 KIKGSR----GTYEFMPPEFFSNESSYNGAKVDIWSLGICLY--------VMFYNVVPFS 253
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRY------------INVALLCVQENAAD 703
L L+ + R+ + P + YP+ + I+ L +++N A+
Sbjct: 254 LKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAE 313
Query: 704 RPTMSEVI 711
R T + +
Sbjct: 314 RITSEDAL 321
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 85 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 137
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 138 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMT 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 453 SVSAATNNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKL 491
S + ++ + + LG+G FG V K E E++L
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 492 TAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIA 551
+L H N+++L ++G L+ E L + + + RII +
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVL 142
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP---KISDFGLARMFGGDELQSNTKRIVG 608
G+ Y+H + +++HRDLKP N+LL+S +I DFGL+ F E K +G
Sbjct: 143 SGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDKIG 196
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T Y++PE +HG + K DV+S GV+L LS
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E E++L +L H N+++L ++G L+ E L + + +
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 152
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP---KISDFGLARMFGGDEL 599
RII + G+ Y+H+ +++HRDLKP N+LL+S +I DFGL+ F E
Sbjct: 153 --RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EA 204
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K +GT Y++PE +HG + K DV+S GV+L LS
Sbjct: 205 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 245
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 38/204 (18%)
Query: 467 LGEGGFGPVYKSGQGL-------------------EEFKNEIKLTAKLQHRNLVRLLGCC 507
LG+G +G VY +G+ L + EI L L+H+N+V+ LG
Sbjct: 30 LGKGTYGIVY-AGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 508 VEQGENVLIYEYLPNKSLDSFLFD-----TTKEGLLGWGARIRIIEGIAQGLLYLHQYSR 562
E G + E +P SL + L E +G+ + I +GL YLH
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK-----QILEGLKYLHDN-- 141
Query: 563 LRVIHRDLKPSNILLDS-NMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+++HRD+K N+L+++ + + KISDFG ++ G + T+ GT YM+PE G
Sbjct: 142 -QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTETFTGTLQYMAPEIIDKG 198
Query: 622 --FFSIKSDVFSFGVLLLETLSSK 643
+ +D++S G ++E + K
Sbjct: 199 PRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + ++ RL
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 142
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFG A++ G +E + + + +M+ E +
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMT 221
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E E++L +L H N+++L ++G L+ E L + + +
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 153
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP---KISDFGLARMFGGDEL 599
RII + G+ Y+H+ +++HRDLKP N+LL+S +I DFGL+ F E
Sbjct: 154 --RIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EA 205
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K +GT Y++PE +HG + K DV+S GV+L LS
Sbjct: 206 SKKMKDKIGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 246
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K D
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDL 140
Query: 528 FLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISD 587
+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI D
Sbjct: 141 YKDFLTLEHLIXYSFQV------AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICD 191
Query: 588 FGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
FGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 192 FGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 37/202 (18%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
L G FG VYK S + +E +E + A + + ++ RL
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRL 89
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTK----EGLLGWGARIRIIEGIAQGLLYLHQ 559
LG C+ LI + +P L ++ + + LL W +I A+G+ YL
Sbjct: 90 LGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKGMNYLED 142
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
R++HRDL N+L+ + KI+DFGLA++ G +E + + + +M+ E +
Sbjct: 143 R---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 620 HGFFSIKSDVFSFGVLLLETLS 641
H ++ +SDV+S+GV + E ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMT 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
++N+ V+ +LG+G F V + S + ++ + E ++ KLQH
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+ + L+++ + L D I+ I + + Y
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HR+LKP N+LL S K++DFGLA E GT GY+S
Sbjct: 145 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 198
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE +S D+++ GV+L
Sbjct: 199 PEVLKKDPYSKPVDIWACGVIL 220
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 50 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 105
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 106 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 88/202 (43%), Gaps = 32/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
++N+ V+ +LG+G F V + S + ++ + E ++ KLQH
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+ + L+++ + L D I+ I + + Y
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGEL---FEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HR+LKP N+LL S K++DFGLA E GT GY+S
Sbjct: 122 HSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG---FAGTPGYLS 175
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE +S D+++ GV+L
Sbjct: 176 PEVLKKDPYSKPVDIWACGVIL 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGW 540
E K EI + L H N+V+ G E L EY L FD + G+
Sbjct: 49 ENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL----FDRIEPDIGMPEP 104
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
A+ R + G++YLH + + HRD+KP N+LLD KISDFGLA +F + +
Sbjct: 105 DAQ-RFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 160
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLSSK 643
++ GT Y++PE F + DV+S G++L L+ +
Sbjct: 161 RLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENV-LIYEYLPNKSLDSFLFDTTKEGLLGWG 541
EE E ++ +L + +VRL+G C Q E + L+ E L FL +E +
Sbjct: 55 EEMMREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV 112
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
A + + ++ G+ YL + + +HRDL N+LL + KISDFGL++ G D+
Sbjct: 113 AEL--LHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD-SY 166
Query: 602 NTKRIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T R G + + +PE FS +SDV+S+GV + E LS
Sbjct: 167 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 208
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 97/225 (43%), Gaps = 41/225 (18%)
Query: 442 METKTQGKSLASVSAATNNFGVENKLGEGGFGPVYKS--------------------GQG 481
ME + + + ++F + LG+G FG VY + +G
Sbjct: 6 MENSSGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEG 65
Query: 482 LE-EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL-----DSFLFDTTKE 535
+E + + EI++ A L H N++RL ++ LI EY P L S FD +
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRT 125
Query: 536 GLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
I+E +A L+Y H +VIHRD+KP N+LL KI+DFG +
Sbjct: 126 AT--------IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS--VH 172
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
L+ T + GT Y+ PE + K D++ GVL E L
Sbjct: 173 APSLRRKT--MCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELL 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK------------------------SGQGLEEFKNEIKLTAK 494
N + LG G FG VY+ S Q +F E + +K
Sbjct: 31 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISK 90
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT----TKEGLLGWGARIRIIEGI 550
H+N+VR +G ++ ++ E + L SFL +T ++ L + + I
Sbjct: 91 FNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDI 150
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIV 607
A G YL + IHRD+ N LL + KI DFG+A+ D +++ R
Sbjct: 151 ACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRKG 203
Query: 608 GT----YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNL 663
G +M PE + G F+ K+D +SFGVLL E S +N L
Sbjct: 204 GCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVL------- 256
Query: 664 WKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ S MDP C P+ + + C Q DRP + ++ +
Sbjct: 257 -EFVTSGGRMDPPKNCPG--PVYR----IMTQCWQHQPEDRPNFAIILERI 300
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 39/226 (17%)
Query: 456 AATNNFGVENKLGEGGFGPV---YKSGQGLE------------------EFKNEIKLTAK 494
A N+ + LGEG FG V Y + G + + EI
Sbjct: 1 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 60
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGL 554
L+H ++++L + E +++ EY N+ D + ++ + AR R + I +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD---YIVQRDKMSEQEAR-RFFQQIISAV 116
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSNTKRIVGTYGYM 613
Y H++ +++HRDLKP N+LLD ++ KI+DFGL+ M G+ L+++ G+ Y
Sbjct: 117 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYA 169
Query: 614 SPEYAIHG--FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+PE I G + + DV+S GV+L L + F+ S+ +L
Sbjct: 170 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP---FDDESIPVL 211
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 69/303 (22%)
Query: 450 SLASVSAATNNFGVEN-------KLGEGGFGPVYK-----SGQGLEEFKNEIKLTAKLQH 497
S A +S NF V+ +LG G +G V K SGQ + + + ++ Q
Sbjct: 35 SKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQK 94
Query: 498 RNLVRL---------------LGCCVEQGENVLIYEYLPNKSLDSF---LFD---TTKEG 536
R L+ L G +G +V I L + SLD F + D T E
Sbjct: 95 RLLMDLDISMRTVDCPFTVTFYGALFREG-DVWICMELMDTSLDKFYKQVIDKGQTIPED 153
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
+LG +I I + L +LH S+L VIHRD+KPSN+L+++ K+ DFG++ G
Sbjct: 154 ILG-----KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGIS----G 202
Query: 597 DELQSNTKRI-VGTYGYMSPEYAIHGF----FSIKSDVFSFGVLLLETLSSKRSTRFFNT 651
+ S K I G YM+PE +S+KSD++S G+ ++E
Sbjct: 203 YLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE------------- 249
Query: 652 NSLTLLGHAWNLWK---DDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMS 708
L +L ++ W + +P Q A +++ C+++N+ +RPT
Sbjct: 250 --LAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK-FSAEFVDFTSQCLKKNSKERPTYP 306
Query: 709 EVI 711
E++
Sbjct: 307 ELM 309
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 39/226 (17%)
Query: 456 AATNNFGVENKLGEGGFGPV---YKSGQGLE------------------EFKNEIKLTAK 494
A N+ + LGEG FG V Y + G + + EI
Sbjct: 5 AHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRL 64
Query: 495 LQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGL 554
L+H ++++L + E +++ EY N+ D + ++ + AR R + I +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFD---YIVQRDKMSEQEAR-RFFQQIISAV 120
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSNTKRIVGTYGYM 613
Y H++ +++HRDLKP N+LLD ++ KI+DFGL+ M G+ L+++ G+ Y
Sbjct: 121 EYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC----GSPNYA 173
Query: 614 SPEYAIHG--FFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+PE I G + + DV+S GV+L L + F+ S+ +L
Sbjct: 174 APE-VISGKLYAGPEVDVWSCGVILYVMLCRRLP---FDDESIPVL 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 43/274 (15%)
Query: 461 FGVENKLGEGGFGPVY-------------------KSGQGLEEFKNEIKLTAKLQHRNLV 501
F + KLG G FG V+ +S +E+ + EI++ L H N++
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG-LLGWGARIRIIEGIAQGLLYLHQY 560
++ + ++ E L + G L G +++ + L Y H
Sbjct: 84 KIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 561 SRLRVIHRDLKPSNILLD--SNMIP-KISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
V+H+DLKP NIL S P KI DFGLA +F DE +N GT YM+PE
Sbjct: 144 ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA---AGTALYMAPE- 196
Query: 618 AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKL 677
+ K D++S GV++ F T L G + + +++ + +
Sbjct: 197 VFKRDVTFKCDIWSAGVVMY----------FLLTGCLPFTGTSLEEVQQKATYKEPNYAV 246
Query: 678 QCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
+C P+ + +++ + ++ RP+ ++V+
Sbjct: 247 ECR---PLTPQAVDLLKQMLTKDPERRPSAAQVL 277
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-----TTKEGL 537
+ EI L L+H+N+V+ LG E G + E +P SL + L E
Sbjct: 50 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 109
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-NMIPKISDFGLARMFGG 596
+G+ + I +GL YLH +++HRD+K N+L+++ + + KISDFG ++ G
Sbjct: 110 IGFYTK-----QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 161
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETLSSK 643
+ T+ GT YM+PE G + +D++S G ++E + K
Sbjct: 162 --INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 28/244 (11%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
I++ IA G+ YL+ + +HRDL N ++ + KI DFG+ R
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNSL 654
+ + +M+PE G F+ SD++SFGV+L E +L+ + N L
Sbjct: 183 TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ L + D E R ++ +C Q N RPT E++++L
Sbjct: 243 KFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPKMRPTFLEIVNLL 286
Query: 715 TNEF 718
++
Sbjct: 287 KDDL 290
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 478 SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
S + ++ + E ++ L+H N+VRL E+G + L+++ + L D
Sbjct: 43 SARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREY 99
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMF 594
I+ I + +L+ HQ + V+HRDLKP N+LL S K++DFGLA
Sbjct: 100 YSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV 156
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
GD Q GT GY+SPE + D+++ GV+L
Sbjct: 157 QGD--QQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 29/175 (16%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K+ +
Sbjct: 80 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPED 139
Query: 528 FLFD-TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
D T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 140 LYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKIC 190
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 52 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 110
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 111 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 166 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 217
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C + NV + C DRPT
Sbjct: 218 PWIGLNGSQILHKIDKEGERLPRPEDCP------QDIYNVMVQCWAHKPEDRPT 265
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 67 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFG 595
I++ IA G+ YL+ + +HR+L N ++ + KI DFG+ R ++
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 183
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNS 653
D + K ++ +M+PE G F+ SD++SFGV+L E +L+ + N
Sbjct: 184 TDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 242
Query: 654 LTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISM 713
L + L + D E R ++ +C Q N RPT E++++
Sbjct: 243 LKFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNL 286
Query: 714 LTNEF 718
L ++
Sbjct: 287 LKDDL 291
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 30/245 (12%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG-- 541
EF NE + ++VRLLG + +++ E + + L S+L E G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 542 -----ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFG 595
I++ IA G+ YL+ + +HR+L N ++ + KI DFG+ R ++
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE--TLSSKRSTRFFNTNS 653
D + K ++ +M+PE G F+ SD++SFGV+L E +L+ + N
Sbjct: 183 TDYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV 241
Query: 654 LTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISM 713
L + L + D E R ++ +C Q N RPT E++++
Sbjct: 242 LKFVMDGGYLDQPDNCPE----------------RVTDLMRMCWQFNPNMRPTFLEIVNL 285
Query: 714 LTNEF 718
L ++
Sbjct: 286 LKDDL 290
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 124/292 (42%), Gaps = 43/292 (14%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVY-----KSGQGL-------------EEFKNEIKLT 492
+ SV + K+G+G G VY +GQ + E NEI +
Sbjct: 13 IVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVM 72
Query: 493 AKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQ 552
+ ++ N+V L + E ++ EYL SL D E + G + Q
Sbjct: 73 RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT----DVVTETCMDEGQIAAVCRECLQ 128
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
L +LH +VIHR++K NILL + K++DFG + QS +VGT +
Sbjct: 129 ALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--QSKRSTMVGTPYW 183
Query: 613 MSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWEL 672
M+PE + K D++S G++ +E + + + N N L A L + + EL
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP--YLNENPL----RALYLIATNGTPEL 237
Query: 673 MDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLTNEFVNLPSP 724
+P E I + ++N C++ + R + E+I ++F+ + P
Sbjct: 238 QNP----EKLSAIFRDFLN---RCLEMDVEKRGSAKELIQ---HQFLKIAKP 279
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 58 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 116
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 117 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 172 PQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 223
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C + NV + C DRPT
Sbjct: 224 PWIGLNGSQILHKIDKEGERLPRPEDCP------QDIYNVMVQCWAHKPEDRPT 271
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 96 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSK 208
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 478 SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
S + ++ + E ++ L+H N+VRL E+G + LI++ + L D
Sbjct: 61 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREY 117
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNM---IPKISDFGLARMF 594
I+ I + +L+ HQ + V+HRDLKP N+LL S + K++DFGLA
Sbjct: 118 YSEADASHCIQQILEAVLHCHQ---MGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV 174
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
G+ Q GT GY+SPE + D+++ GV+L
Sbjct: 175 EGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 453 SVSAATNNFGVENKLGEGGFGPV---------------------YKSGQGLEEFKNEIKL 491
S + ++ + + LG+G FG V K E E++L
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 492 TAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIA 551
+L H N+ +L ++G L+ E L + + + RII +
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA---RIIRQVL 136
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP---KISDFGLARMFGGDELQSNTKRIVG 608
G+ Y H + +++HRDLKP N+LL+S +I DFGL+ F E K +G
Sbjct: 137 SGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDKIG 190
Query: 609 TYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T Y++PE +HG + K DV+S GV+L LS
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLS 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 45/275 (16%)
Query: 467 LGEGGFGPVYK------SGQGL----------------EEFKNEIKLTAKLQHRNLVRLL 504
LGEG FG VY+ G+ + E+F +E + L H ++V+L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G +E+ +I E P L +L + K L + ++ I + + YL +
Sbjct: 92 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLES---IN 145
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFF 623
+HRD+ NIL+ S K+ DFGL+R D +++ R+ +MSPE F
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 203
Query: 624 SIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASY 683
+ SDV+ F V + E LS + F+ N ++G L K DR L P L Y
Sbjct: 204 TTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIG---VLEKGDR---LPKPDLCPPVLY 256
Query: 684 PIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ R C + +DRP +E++ L++ +
Sbjct: 257 TLMTR-------CWDYDPSDRPRFTELVCSLSDVY 284
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 94/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 48 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 106
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 107 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 162 PQNDDHXVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 213
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C NV + C DRPT
Sbjct: 214 PWIGLNGSQILHKIDKEGERLPRPEDCPQD------IYNVMVQCWAHKPEDRPT 261
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 58 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 116
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 117 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 172 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 223
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C + NV + C DRPT
Sbjct: 224 PWIGLNGSQILHKIDKEGERLPRPEDCP------QDIYNVMVQCWAHKPEDRPT 271
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 45/275 (16%)
Query: 467 LGEGGFGPVYK------SGQGL----------------EEFKNEIKLTAKLQHRNLVRLL 504
LGEG FG VY+ G+ + E+F +E + L H ++V+L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G +E+ +I E P L +L + K L + ++ I + + YL +
Sbjct: 76 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLES---IN 129
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFF 623
+HRD+ NIL+ S K+ DFGL+R D +++ R+ +MSPE F
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 187
Query: 624 SIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASY 683
+ SDV+ F V + E LS + F+ N ++G L K DR L P L Y
Sbjct: 188 TTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIG---VLEKGDR---LPKPDLCPPVLY 240
Query: 684 PIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ R C + +DRP +E++ L++ +
Sbjct: 241 TLMTR-------CWDYDPSDRPRFTELVCSLSDVY 268
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 45/275 (16%)
Query: 467 LGEGGFGPVYK------SGQGL----------------EEFKNEIKLTAKLQHRNLVRLL 504
LGEG FG VY+ G+ + E+F +E + L H ++V+L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G +E+ +I E P L +L + K L + ++ I + + YL +
Sbjct: 80 GI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVLTLVLYSLQ-ICKAMAYLES---IN 133
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMF-GGDELQSNTKRIVGTYGYMSPEYAIHGFF 623
+HRD+ NIL+ S K+ DFGL+R D +++ R+ +MSPE F
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRL--PIKWMSPESINFRRF 191
Query: 624 SIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASY 683
+ SDV+ F V + E LS + F+ N ++G L K DR L P L Y
Sbjct: 192 TTASDVWMFAVCMWEILSFGKQPFFWLENK-DVIG---VLEKGDR---LPKPDLCPPVLY 244
Query: 684 PIVKRYINVALLCVQENAADRPTMSEVISMLTNEF 718
++ R C + +DRP +E++ L++ +
Sbjct: 245 TLMTR-------CWDYDPSDRPRFTELVCSLSDVY 272
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 95
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 96 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 149
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 150 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 208
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 209 GYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 96
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 97 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 150
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 151 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 209
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 210 GYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 87
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 88 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 141
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 142 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 200
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 201 GYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 109
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 110 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 166 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 89 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNE 488
+ +A+ + T+++ + +LG+G F V + S + ++ + E
Sbjct: 21 QXMATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLERE 80
Query: 489 IKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIE 548
++ L+H N+VRL E+G + L+++ + L D I
Sbjct: 81 ARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIH 137
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKR 605
I + + ++HQ+ ++HRDLKP N+LL S K++DFGLA G+ Q
Sbjct: 138 QILESVNHIHQHD---IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGE--QQAWFG 192
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
GT GY+SPE + D+++ GV+L
Sbjct: 193 FAGTPGYLSPEVLRKDPYGKPVDIWACGVIL 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 52 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 109
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 110 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 165
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 166 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 48 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 106
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 107 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 162 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 213
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C + NV + C DRPT
Sbjct: 214 PWIGLNGSQILHKIDKEGERLPRPEDCP------QDIYNVMVQCWAHKPEDRPT 261
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 34/258 (13%)
Query: 413 QPMAREAILVICPS-FSSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGG 471
QP+ R + + + F S YF+ L Q K L + + F LG GG
Sbjct: 144 QPLLRAVLAHLGQAPFQEFLDSLYFLRFL------QWKWLEAQPMGEDWFLDFRVLGRGG 197
Query: 472 FGPVYK-----SGQ----------------GLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ 510
FG V+ +G+ G + E K+ AK+ R +V L +
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK 257
Query: 511 GENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-IRIIEGIAQGLLYLHQYSRLRVIHRD 569
+ L+ + + +++ ++ R I I GL +LHQ + +I+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRD 314
Query: 570 LKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDV 629
LKP N+LLD + +ISD GLA Q+ TK GT G+M+PE + + D
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 630 FSFGVLLLETLSSKRSTR 647
F+ GV L E ++++ R
Sbjct: 373 FALGVTLYEMIAARGPFR 390
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 88
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 89 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 142
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 143 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 201
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 202 GYTKSIDIWSVGCILAEMLSNR 223
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 34/258 (13%)
Query: 413 QPMAREAILVICPS-FSSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGG 471
QP+ R + + + F S YF+ L Q K L + + F LG GG
Sbjct: 144 QPLLRAVLAHLGQAPFQEFLDSLYFLRFL------QWKWLEAQPMGEDWFLDFRVLGRGG 197
Query: 472 FGPVYK-----SGQ----------------GLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ 510
FG V+ +G+ G + E K+ AK+ R +V L +
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK 257
Query: 511 GENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-IRIIEGIAQGLLYLHQYSRLRVIHRD 569
+ L+ + + +++ ++ R I I GL +LHQ + +I+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRD 314
Query: 570 LKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDV 629
LKP N+LLD + +ISD GLA Q+ TK GT G+M+PE + + D
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 630 FSFGVLLLETLSSKRSTR 647
F+ GV L E ++++ R
Sbjct: 373 FALGVTLYEMIAARGPFR 390
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGF 183
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 416 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 472
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 473 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 526
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 527 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 583
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 584 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 628
Query: 716 NEFVNL 721
N + ++
Sbjct: 629 NYYYDV 634
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 34/258 (13%)
Query: 413 QPMAREAILVICPS-FSSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGG 471
QP+ R + + + F S YF+ L Q K L + + F LG GG
Sbjct: 144 QPLLRAVLAHLGQAPFQEFLDSLYFLRFL------QWKWLEAQPMGEDWFLDFRVLGRGG 197
Query: 472 FGPVYK-----SGQ----------------GLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ 510
FG V+ +G+ G + E K+ AK+ R +V L +
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK 257
Query: 511 GENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-IRIIEGIAQGLLYLHQYSRLRVIHRD 569
+ L+ + + +++ ++ R I I GL +LHQ + +I+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRD 314
Query: 570 LKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDV 629
LKP N+LLD + +ISD GLA Q+ TK GT G+M+PE + + D
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 630 FSFGVLLLETLSSKRSTR 647
F+ GV L E ++++ R
Sbjct: 373 FALGVTLYEMIAARGPFR 390
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 95/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 52 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 110
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 111 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 165
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 166 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 217
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C + NV + C DRPT
Sbjct: 218 PWIGLNGSQILHKIDKEGERLPRPEDCP------QDIYNVMVQCWAHKPEDRPT 265
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 415 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 471
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 472 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 526 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 582
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 583 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 627
Query: 716 NEFVNL 721
N + ++
Sbjct: 628 NYYYDV 633
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+ + EI+ +H ++++L + ++ EY+ L ++ K G L
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYI---CKNGRLDEKES 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
R+ + I G+ Y H++ V+HRDLKP N+LLD++M KI+DFGL+ M E +
Sbjct: 119 RRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXS 175
Query: 604 KRIVGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETL 640
G+ Y +PE I G + + D++S GV+L L
Sbjct: 176 ---CGSPNYAAPE-VISGRLYAGPEVDIWSSGVILYALL 210
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 94/234 (40%), Gaps = 22/234 (9%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTK 534
V + +++F E+ L HRNL+RL G + ++ E P SL L
Sbjct: 48 VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQG 106
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
LLG +R + +A+G+ YL R IHRDL N+LL + + KI DFGL R
Sbjct: 107 HFLLGTLSRYAV--QVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRAL 161
Query: 595 --GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTN 652
D R V + + +PE FS SD + FGV L E + +
Sbjct: 162 PQNDDHYVMQEHRKV-PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFT-------YGQE 213
Query: 653 SLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPT 706
L + L K D+ E + C NV + C DRPT
Sbjct: 214 PWIGLNGSQILHKIDKEGERLPRPEDCPQD------IYNVMVQCWAHKPEDRPT 261
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLV----RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 183
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLV----RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 110/258 (42%), Gaps = 34/258 (13%)
Query: 413 QPMAREAILVICPS-FSSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGG 471
QP+ R + + + F S YF+ L Q K L + + F LG GG
Sbjct: 144 QPLLRAVLAHLGQAPFQEFLDSKYFLRFL------QWKWLEAQPMGEDWFLDFRVLGRGG 197
Query: 472 FGPVYK-----SGQ----------------GLEEFKNEIKLTAKLQHRNLVRLLGCCVEQ 510
FG V+ +G+ G + E K+ AK+ R +V L +
Sbjct: 198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK 257
Query: 511 GENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR-IRIIEGIAQGLLYLHQYSRLRVIHRD 569
+ L+ + + +++ ++ R I I GL +LHQ + +I+RD
Sbjct: 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRD 314
Query: 570 LKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDV 629
LKP N+LLD + +ISD GLA Q+ TK GT G+M+PE + + D
Sbjct: 315 LKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPELLLGEEYDFSVDY 372
Query: 630 FSFGVLLLETLSSKRSTR 647
F+ GV L E ++++ R
Sbjct: 373 FALGVTLYEMIAARGPFR 390
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 465 NKLGEGGFGPVYKS-------------------GQGLEEFKNEIKLTAKLQHRNLVRLLG 505
+++G+G FG VYK +E+ + EI + ++ + R G
Sbjct: 25 DRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFG 84
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D K G L I+ I +GL YLH R
Sbjct: 85 SYLKSTKLWIIMEYLGGGSA----LDLLKPGPLEETYIATILREILKGLDYLHSE---RK 137
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL K++DFG+A +++ N VGT +M+PE +
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDF 195
Query: 626 KSDVFSFGVLLLE 638
K+D++S G+ +E
Sbjct: 196 KADIWSLGITAIE 208
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 134
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 135 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 191
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 126
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 127 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 183
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 146
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 203
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 95/202 (47%), Gaps = 32/202 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFK-------------------NEIKLTAKLQHRNLVRL---- 503
+GEG +G V + L + + EIK+ + +H N++ +
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDII 94
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRL 563
+EQ ++V I + L +++ L+ K L + I +GL Y+H +
Sbjct: 95 RAPTIEQMKDVYIVQDL----METDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSAN-- 148
Query: 564 RVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN-TKRIVGTYGYMSPEYAIHGF 622
V+HRDLKPSN+LL++ KI DFGLAR+ D + V T Y +PE ++
Sbjct: 149 -VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK 207
Query: 623 FSIKS-DVFSFGVLLLETLSSK 643
KS D++S G +L E LS++
Sbjct: 208 GYTKSIDIWSVGCILAEMLSNR 229
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 32/175 (18%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSL-D 526
+E+K+ + H N+V LLG C + G +++ E++P K L
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 527 SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
FL T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 139 DFL---TLEHLIXYSFQV------AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIX 186
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDS-FLFDTTKEGLLGWGARI 544
+ EI T ++H NL++ + ++G N+ + +L D L D K ++ W
Sbjct: 57 EREIFSTPGMKHENLLQFIAA-EKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELC 115
Query: 545 RIIEGIAQGLLYLHQY--------SRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
+ E +++GL YLH+ + + HRD K N+LL S++ ++DFGLA F
Sbjct: 116 HVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP 175
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVF------SFGVLLLETLS 641
+ +T VGT YM+PE + G + + D F + G++L E +S
Sbjct: 176 GKPPGDTHGQVGTRRYMAPE-VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 11/162 (6%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENV-LIYEYLPNKSLDSFLFDTTKEGLLGWG 541
EE E ++ +L + +VRL+G C Q E + L+ E L FL +E +
Sbjct: 381 EEMMREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNV 438
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
A + + ++ G+ YL + + +HR+L N+LL + KISDFGL++ G D+
Sbjct: 439 AEL--LHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD-SY 492
Query: 602 NTKRIVGTY--GYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T R G + + +PE FS +SDV+S+GV + E LS
Sbjct: 493 YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALS 534
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 139 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 190 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 113
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 114 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENX 167
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 168 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 225 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 269
Query: 716 NEFVNL 721
N + ++
Sbjct: 270 NYYYDV 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G E+ + E+ + ++QH N++ L + + +LI E + L FL KE
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFL--AEKES 110
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLAR 592
L A ++ I G+ YLH L++ H DLKP NI+L +P KI DFGLA
Sbjct: 111 LTEEEA-TEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166
Query: 593 MFG-GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 167 KIDFGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 51 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 107
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 108 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 161
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 162 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 218
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 219 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 263
Query: 716 NEFVNL 721
N + ++
Sbjct: 264 NYYYDV 269
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 130 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 25/175 (14%)
Query: 477 KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENV-LIYEYLPNKSLDSFLFDTTK 534
KSG Q + + + L H ++VRLLG C G ++ L+ +YLP SL D +
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LDHVR 124
Query: 535 EG--------LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
+ LL WG +I A+G+ YL ++ ++HR+L N+LL S +++
Sbjct: 125 QHRGALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVA 175
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFG+A + D+ Q +M+ E G ++ +SDV+S+GV + E ++
Sbjct: 176 DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 130 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 181 CDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 71 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 127
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 128 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 181
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 182 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 238
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 239 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 283
Query: 716 NEFVNL 721
N + ++
Sbjct: 284 NYYYDV 289
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 57 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 113
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 114 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 167
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 168 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 224
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 225 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 269
Query: 716 NEFVNL 721
N + ++
Sbjct: 270 NYYYDV 275
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 31/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
T + + +LG+G F V + S + ++ + E ++ L+H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+G + LI++ + L D I+ I + +L+
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGEL---FEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 558 HQYSRLRVIHRDLKPSNILLDSNM---IPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
HQ + V+HR+LKP N+LL S + K++DFGLA G+ Q GT GY+S
Sbjct: 127 HQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE--QQAWFGFAGTPGYLS 181
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE + D+++ GV+L
Sbjct: 182 PEVLRKDPYGKPVDLWACGVIL 203
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 91/200 (45%), Gaps = 33/200 (16%)
Query: 467 LGEGGFGPVYK-----------------------SGQGLEEFKNEIKLTAKLQHRNLVRL 503
LG G FG VYK S + +E +E + A + + RL
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 504 LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE--GLLGWGARIRIIEGIAQGLLYLHQYS 561
LG C+ L+ + +P L D +E G LG + IA+G+ YL
Sbjct: 85 LGICLTSTVQ-LVTQLMPY----GCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED-- 137
Query: 562 RLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG 621
+R++HRDL N+L+ S KI+DFGLAR+ DE + + +M+ E +
Sbjct: 138 -VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 622 FFSIKSDVFSFGVLLLETLS 641
F+ +SDV+S+GV + E ++
Sbjct: 197 RFTHQSDVWSYGVTVWELMT 216
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 129
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 130 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 184 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 241 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 285
Query: 716 NEFVNL 721
N + ++
Sbjct: 286 NYYYDV 291
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 73 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 129
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 130 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 183
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 184 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 240
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 241 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 285
Query: 716 NEFVNL 721
N + ++
Sbjct: 286 NYYYDV 291
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF-LFDTTKEGLLGWGARIRI 546
EIKL +L+H NLV LL C ++ L++E++ + LD LF + + +I
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG-DELQSNTKR 605
I GI + H ++ +IHRD+KP NIL+ + + K+ DFG AR E+ +
Sbjct: 134 INGIG----FCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-- 184
Query: 606 IVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETL 640
V T Y +PE + + DV++ G L+ E
Sbjct: 185 -VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 82/175 (46%), Gaps = 32/175 (18%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSL-D 526
+E+K+ + H N+V LLG C + G +++ E++P K L
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK 138
Query: 527 SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
FL T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 139 DFL---TLEHLICYSFQV------AKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIC 186
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 88/175 (50%), Gaps = 25/175 (14%)
Query: 477 KSG-QGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENV-LIYEYLPNKSLDSFLFDTTK 534
KSG Q + + + L H ++VRLLG C G ++ L+ +YLP SL D +
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSL----LDHVR 106
Query: 535 EG--------LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKIS 586
+ LL WG +I A+G+ YL ++ ++HR+L N+LL S +++
Sbjct: 107 QHRGALGPQLLLNWGVQI------AKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVA 157
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFG+A + D+ Q +M+ E G ++ +SDV+S+GV + E ++
Sbjct: 158 DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 53 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 109
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 110 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 163
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 164 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 220
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 221 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 265
Query: 716 NEFVNL 721
N + ++
Sbjct: 266 NYYYDV 271
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ + +H N++ + +EQ ++V YL + + L+ K L
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDV----YLVTHLMGADLYKLLKTQHLSNDHI 146
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 147 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGF 203
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 81 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPE 140
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 141 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 191
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 192 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 34/246 (13%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TKEGLLGW 540
+E E + +L + +VR++G C E +L+ E L+ +L K+ +
Sbjct: 63 DELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-- 119
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE-- 598
I ++ ++ G+ YL + + +HRDL N+LL + KISDFGL++ DE
Sbjct: 120 ---IELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 173
Query: 599 --LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNTNSLT 655
Q++ K V Y +PE + FS KSDV+SFGVL+ E S ++ R + +T
Sbjct: 174 YKAQTHGKWPVKWY---APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVT 230
Query: 656 LLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISMLT 715
+ L K +R + C A P + ++ LC + +RP + V L
Sbjct: 231 AM-----LEKGER--------MGCPAGCP--REMYDLMNLCWTYDVENRPGFAAVELRLR 275
Query: 716 NEFVNL 721
N + ++
Sbjct: 276 NYYYDV 281
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGF 185
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 34/178 (19%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 139 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 586 SDFGLARMF--GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D ++ R+ +M+PE ++I+SDV+SFGVLL E S
Sbjct: 190 CDFGLARDIYKDPDXVRKGDARL--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 466 KLGEGGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+LG+G FG VYK S + LE++ EI + A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII-EGIAQGLLYLHQYSRLRVI 566
+ ++ E+ ++D+ + + + ++I+++ + L YLH ++I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KII 157
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI------VGTYGYMSPEYAI- 619
HRDLK NIL + K++DFG++ NT+ I +GT +M+PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS--------AKNTRTIQRRDSFIGTPYWMAPEVVMC 209
Query: 620 ----HGFFSIKSDVFSFGVLLLE 638
+ K+DV+S G+ L+E
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIE 232
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 466 KLGEGGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+LG+G FG VYK S + LE++ EI + A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII-EGIAQGLLYLHQYSRLRVI 566
+ ++ E+ ++D+ + + + ++I+++ + L YLH ++I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KII 157
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI------VGTYGYMSPEYAI- 619
HRDLK NIL + K++DFG++ NT+ I +GT +M+PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQRRDSFIGTPYWMAPEVVMC 209
Query: 620 ----HGFFSIKSDVFSFGVLLLE 638
+ K+DV+S G+ L+E
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIE 232
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 13/162 (8%)
Query: 488 EIKLTAKLQHRNLVRL----LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
EIK+ +H N++ + +EQ ++V I + L +++ L+ K L
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDL----METDLYKLLKTQHLSNDHI 128
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN- 602
+ I +GL Y+H + V+HRDLKPSN+LL++ KI DFGLAR+ D +
Sbjct: 129 CYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGF 185
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 95/203 (46%), Gaps = 44/203 (21%)
Query: 466 KLGEGGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+LG+G FG VYK S + LE++ EI + A H N+V+LL
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII-EGIAQGLLYLHQYSRLRVI 566
+ ++ E+ ++D+ + + + ++I+++ + L YLH ++I
Sbjct: 104 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KII 157
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI------VGTYGYMSPEYAI- 619
HRDLK NIL + K++DFG++ NT+ I +GT +M+PE +
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVS--------AKNTRXIQRRDXFIGTPYWMAPEVVMC 209
Query: 620 ----HGFFSIKSDVFSFGVLLLE 638
+ K+DV+S G+ L+E
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIE 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 79 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 138
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 139 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 189
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY---KSGQG-LEEFKNEIKLTAKLQHRNLV----RLL 504
++ N+F V +G GGFG VY K+ G + K K K++ + R++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 505 GCCVEQGENVLI----YEYLPNKSLDSFLFDTTKEGLLGWG---------ARIRIIEG-I 550
V G+ I Y + L SF+ D G L + A +R I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
GL ++H +R V++RDLKP+NILLD + +ISD GLA F + ++ VGT+
Sbjct: 302 ILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 354
Query: 611 GYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
GYM+PE G + +D FS G +L + L R T
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY---KSGQG-LEEFKNEIKLTAKLQHRNLV----RLL 504
++ N+F V +G GGFG VY K+ G + K K K++ + R++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 505 GCCVEQGENVLI----YEYLPNKSLDSFLFDTTKEGLLGWG---------ARIRIIEG-I 550
V G+ I Y + L SF+ D G L + A +R I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
GL ++H +R V++RDLKP+NILLD + +ISD GLA F + ++ VGT+
Sbjct: 302 ILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 354
Query: 611 GYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
GYM+PE G + +D FS G +L + L R T
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY---KSGQG-LEEFKNEIKLTAKLQHRNLV----RLL 504
++ N+F V +G GGFG VY K+ G + K K K++ + R++
Sbjct: 182 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 505 GCCVEQGENVLI----YEYLPNKSLDSFLFDTTKEGLLGWG---------ARIRIIEG-I 550
V G+ I Y + L SF+ D G L + A +R I
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 300
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
GL ++H +R V++RDLKP+NILLD + +ISD GLA F + ++ VGT+
Sbjct: 301 ILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 353
Query: 611 GYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
GYM+PE G + +D FS G +L + L R T
Sbjct: 354 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 130 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 101/224 (45%), Gaps = 31/224 (13%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY---KSGQG-LEEFKNEIKLTAKLQHRNLV----RLL 504
++ N+F V +G GGFG VY K+ G + K K K++ + R++
Sbjct: 183 NIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 505 GCCVEQGENVLI----YEYLPNKSLDSFLFDTTKEGLLGWG---------ARIRIIEG-I 550
V G+ I Y + L SF+ D G L + A +R I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKL-SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEI 301
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
GL ++H +R V++RDLKP+NILLD + +ISD GLA F + ++ VGT+
Sbjct: 302 ILGLEHMH--NRF-VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS----VGTH 354
Query: 611 GYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNS 653
GYM+PE G + +D FS G +L + L R T
Sbjct: 355 GYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 70 SELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPE 129
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 130 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 180
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 181 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQG--ENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
+F+ EI++ L +V+ G G E L+ EYLP+ L FL L
Sbjct: 54 DFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFL--QRHRARLDAS 111
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ I +G+ YL SR R +HRDL NIL++S KI+DFGLA++ D+
Sbjct: 112 RLLLYSSQICKGMEYLG--SR-RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 165
Query: 602 NTKRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+V G + +PE FS +SDV+SFGV+L E +
Sbjct: 166 -DXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 13/157 (8%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
EE NEI L L H N+++L ++ L+ E+ L + + K
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK---FDECD 147
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDEL 599
I++ I G+ YLH+++ ++HRD+KP NILL++ + KI DFGL+ F D
Sbjct: 148 AANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-- 202
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
+ +GT Y++PE + ++ K DV+S GV++
Sbjct: 203 -YKLRDRLGTAYYIAPE-VLKKKYNEKCDVWSCGVIM 237
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 30/176 (17%)
Query: 487 NEIKLTAKL-QHRNLVRLLGCCVEQGENVLIY------------------EYLPNKSLDS 527
+E+K+ + H N+V LLG C + G +++ E++P K
Sbjct: 116 SELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPE 175
Query: 528 FLFDT--TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKI 585
L+ T E L+ + ++ A+G+ +L + + IHRDL NILL + KI
Sbjct: 176 DLYKDFLTLEHLICYSFQV------AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKI 226
Query: 586 SDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
DFGLAR D +M+PE ++I+SDV+SFGVLL E S
Sbjct: 227 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
II+ + G+ YLH+++ ++HRDLKP N+LL+S + + KI DFGL+ +F E Q
Sbjct: 141 IIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKK 194
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
K +GT Y++PE + + K DV+S GV+L L+
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLA 232
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 103/219 (47%), Gaps = 34/219 (15%)
Query: 457 ATNNFGVENKLGEGGFGPVY-----KSGQ--GLEEFKNEIKLTAK-LQHRN--------- 499
+ +F + LG G FG V+ +G+ ++ K EI + K ++H N
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV 63
Query: 500 ----LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
++R+ G + + +I +Y+ L S L + + A+ E + L
Sbjct: 64 THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAE-VCLALE 120
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
YLH +I+RDLKP NILLD N KI+DFG A+ + T + GT Y++P
Sbjct: 121 YLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKY-----VPDVTYXLCGTPDYIAP 172
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
E ++ D +SFG+L+ E L+ T F+++N++
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAG--YTPFYDSNTM 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 86/161 (53%), Gaps = 16/161 (9%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKEGLLG 539
+E+ EI + KL H N+V+L+ + E+ L ++E + + T + L
Sbjct: 80 IEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---PTLKPLSE 136
Query: 540 WGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF-GGDE 598
AR + + +G+ YLH ++IHRD+KPSN+L+ + KI+DFG++ F G D
Sbjct: 137 DQARF-YFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA 192
Query: 599 LQSNTKRIVGTYGYMSPE--YAIHGFFSIKS-DVFSFGVLL 636
L SNT VGT +M+PE FS K+ DV++ GV L
Sbjct: 193 LLSNT---VGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 14/155 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGAR 543
+NEI + K++H N+V L L+ + + L FD ++G
Sbjct: 67 IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL----FDRIVEKGFYTEKDA 122
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL---DSNMIPKISDFGLARMFGGDELQ 600
+I + + YLH R+ ++HRDLKP N+L D ISDFGL++M G ++
Sbjct: 123 STLIRQVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
S GT GY++PE +S D +S GV+
Sbjct: 180 STA---CGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 102/234 (43%), Gaps = 16/234 (6%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKEGLLGWG 541
+F+ EI++ L +V+ G G L + EYLP+ L FL L
Sbjct: 57 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 114
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ I +G+ YL R +HRDL NIL++S KI+DFGLA++ D+
Sbjct: 115 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 168
Query: 602 NTKRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL 656
+V G + +PE FS +SDV+SFGV+L E + + + L +
Sbjct: 169 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 227
Query: 657 LGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
+G ++ R EL++ + A + LC + DRP+ S +
Sbjct: 228 MGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 35/218 (16%)
Query: 450 SLASVSAATNNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLT 492
L+++ F + +G G +G VYK +G EE K EI +
Sbjct: 15 DLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINML 74
Query: 493 AKL-QHRNLVRLLGCCVEQG------ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K HRN+ G +++ + L+ E+ S+ + L TK L
Sbjct: 75 KKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSV-TDLIKNTKGNTLKEEWIAY 133
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
I I +GL +LHQ+ +VIHRD+K N+LL N K+ DFG++ + NT
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNT-- 188
Query: 606 IVGTYGYMSPEYAI-----HGFFSIKSDVFSFGVLLLE 638
+GT +M+PE + KSD++S G+ +E
Sbjct: 189 FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + +++H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLA- 591
L A + ++ I G+ YLH R+ H DLKP NI+L +P K+ DFG+A
Sbjct: 112 LTEDEA-TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 167
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
++ G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 168 KIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + +++H N++ L + + VLI E + L FL KE
Sbjct: 47 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 104
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLA- 591
L A + ++ I G+ YLH R+ H DLKP NI+L +P K+ DFG+A
Sbjct: 105 LTEDEA-TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
++ G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 161 KIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKEGLLGWG 541
+F+ EI++ L +V+ G G L + EYLP+ L FL L
Sbjct: 70 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 127
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ I +G+ YL R +HRDL NIL++S KI+DFGLA++ D+
Sbjct: 128 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 181
Query: 602 NTKRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+V G + +PE FS +SDV+SFGV+L E +
Sbjct: 182 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVL--IYEYLPNKSLDSFLFDTTKEGLLGWG 541
+F+ EI++ L +V+ G G L + EYLP+ L FL L
Sbjct: 58 DFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFL--QRHRARLDAS 115
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ I +G+ YL R +HRDL NIL++S KI+DFGLA++ D+
Sbjct: 116 RLLLYSSQICKGMEYL---GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK--- 169
Query: 602 NTKRIVGTYG-----YMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+V G + +PE FS +SDV+SFGV+L E +
Sbjct: 170 -DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 15/170 (8%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + +++H N++ L + + VLI E + L FL KE
Sbjct: 68 RRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL--AEKES 125
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP----KISDFGLA- 591
L A + ++ I G+ YLH R+ H DLKP NI+L +P K+ DFG+A
Sbjct: 126 LTEDEA-TQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 181
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
++ G+E K I GT +++PE + +++D++S GV+ LS
Sbjct: 182 KIEAGNEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 227
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ Q E NE+ + QH N+V + + E ++ E+L +L D +
Sbjct: 81 RKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT----DIVSQV 136
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
L + E + Q L YLH VIHRD+K +ILL + K+SDFG
Sbjct: 137 RLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISK 193
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
D K +VGT +M+PE ++ + D++S G++++E + +
Sbjct: 194 D--VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 465 NKLGEGGFGPVYKS----GQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K Q + K EI + ++ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D + G L I+ I +GL YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL + K++DFG+A +++ NT VGT +M+PE +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 183
Query: 626 KSDVFSFGVLLLE 638
K+D++S G+ +E
Sbjct: 184 KADIWSLGITAIE 196
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE S SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
G + I IA+ + +LH ++HRDLKPSNI + + K+ DFGL DE +
Sbjct: 164 GVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEE 220
Query: 601 SNT----------KRIVGTYGYMSPEYAIHG-FFSIKSDVFSFGVLLLETLSS 642
VGT YMSPE IHG +S K D+FS G++L E L S
Sbjct: 221 QTVLTPMPAYATHXGQVGTKLYMSPE-QIHGNNYSHKVDIFSLGLILFELLYS 272
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 122/280 (43%), Gaps = 60/280 (21%)
Query: 466 KLGEGGFGPVYK-----SGQGLEEFKNEIKLTAKLQHRNLVRL---------------LG 505
+LG G +G V K SGQ + + + ++ Q R L+ L G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 506 CCVEQGENVLIYEYLPNKSLDSF---LFD---TTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+G +V I L + SLD F + D T E +LG +I I + L +LH
Sbjct: 74 ALFREG-DVWICMELMDTSLDKFYKQVIDKGQTIPEDILG-----KIAVSIVKALEHLH- 126
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
S+L VIHRD+KPSN+L+++ K+ DFG++ D + G YM+PE
Sbjct: 127 -SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID---AGCKPYMAPERIN 182
Query: 620 HGF----FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWK---DDRSWEL 672
+S+KSD++S G+ ++E L +L ++ W +
Sbjct: 183 PELNQKGYSVKSDIWSLGITMIE---------------LAILRFPYDSWGTPFQQLKQVV 227
Query: 673 MDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
+P Q A +++ C+++N+ +RPT E++
Sbjct: 228 EEPSPQLPAD-KFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 28/193 (14%)
Query: 465 NKLGEGGFGPVYKS----GQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K Q + K EI + ++ + + G
Sbjct: 33 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D + G L I+ I +GL YLH +
Sbjct: 93 SYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 145
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL + K++DFG+A +++ NT VGT +M+PE +
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIKQSAYDS 203
Query: 626 KSDVFSFGVLLLE 638
K+D++S G+ +E
Sbjct: 204 KADIWSLGITAIE 216
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 36/207 (17%)
Query: 461 FGVENKLGEGGFGPV-----YKSGQGLE----------------EFKNEIKLTAKLQHRN 499
+ + LGEG FG V YK+ Q + + EI L+H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+++L + V++ EY + D + K+ + R R + I + Y H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFD---YIVEKKRMTEDEGR-RFFQQIICAIEYCH- 125
Query: 560 YSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MFGGDELQSNTKRIVGTYGYMSPEYA 618
R +++HRDLKP N+LLD N+ KI+DFGL+ M G+ L+++ G+ Y +PE
Sbjct: 126 --RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC----GSPNYAAPE-V 178
Query: 619 IHG--FFSIKSDVFSFGVLLLETLSSK 643
I+G + + DV+S G++L L +
Sbjct: 179 INGKLYAGPEVDVWSCGIVLYVMLVGR 205
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 100/224 (44%), Gaps = 34/224 (15%)
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSF-------LFDTTKEGLLGWGARIRIIEGIAQ 552
+V+ G +G+ + E + + S D F L D E +LG +I +
Sbjct: 83 IVQFYGALFREGDCWICMELM-STSFDKFYKYVYSVLDDVIPEEILG-----KITLATVK 136
Query: 553 GLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK-RIVGTYG 611
L +L + L++IHRD+KPSNILLD + K+ DFG++ G + S K R G
Sbjct: 137 ALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDFGIS----GQLVDSIAKTRDAGCRP 190
Query: 612 YMSPEY----AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDD 667
YM+PE A + ++SDV+S G+ L E + RF ++ + K D
Sbjct: 191 YMAPERIDPSASRQGYDVRSDVWSLGITLYELATG----RFPYPKWNSVFDQLTQVVKGD 246
Query: 668 RSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
P+L +IN LC+ ++ + RP E++
Sbjct: 247 ------PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 47/236 (19%)
Query: 459 NNFGVENKLGEGGFGPVYK-------------SGQGLEEFKNE--IKLTAKLQHRNLVRL 503
+N + +G G +G VYK S + F NE I ++H N+ R
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARF 72
Query: 504 LG-----CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
+ + E +L+ EY PN SL +L T + W + R+ + +GL YLH
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD----WVSSCRLAHSVTRGLAYLH 128
Query: 559 ------QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL----QSNTKRI-- 606
+ + + HRDL N+L+ ++ ISDFGL+ G+ L + + I
Sbjct: 129 TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISE 188
Query: 607 VGTYGYMSPEYAIHGFFSIKS--------DVFSFGVLLLETLSSKRSTRFFNTNSL 654
VGT YM+PE + G +++ D+++ G++ E R T F S+
Sbjct: 189 VGTIRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF--MRCTDLFPGESV 241
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL-----FDTTKEGLLGWG 541
E + ++L H V+L C + + Y N L ++ FD T
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDET-------C 138
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
R E I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+
Sbjct: 139 TRFYTAE-IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQA 194
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
VGT Y+SPE SD+++ G ++ + ++
Sbjct: 195 RANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKS--------------------GQGLE-EFKNEIKLTAKLQH 497
++F + LG+G FG VY + +G+E + + EI++ + L+H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N++R+ ++ L+ E+ P L + K G +E +A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYK---ELQKHGRFDEQRSATFMEELADALHYC 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
H+ +VIHRD+KP N+L+ KI+DFG + + + GT Y+ PE
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 618 AIHGFFSIKSDVFSFGVLLLETL 640
K D++ GVL E L
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 31/203 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKS--------------------GQGLE-EFKNEIKLTAKLQH 497
++F + LG+G FG VY + +G+E + + EI++ + L+H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N++R+ ++ L+ E+ P L + K G +E +A L Y
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYK---ELQKHGRFDEQRSATFMEELADALHYC 131
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
H+ +VIHRD+KP N+L+ KI+DFG + L+ + + GT Y+ PE
Sbjct: 132 HER---KVIHRDIKPENLLMGYKGELKIADFGWS--VHAPSLRR--RXMCGTLDYLPPEM 184
Query: 618 AIHGFFSIKSDVFSFGVLLLETL 640
K D++ GVL E L
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFL 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 30/242 (12%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLL 538
G E+ K E + L+H ++V LL G +++E++ L F+ K
Sbjct: 67 GLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADA 123
Query: 539 GW----GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS--NMIP-KISDFGLA 591
G+ + I + L Y H + +IHRD+KP N+LL S N P K+ DFG+A
Sbjct: 124 GFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVA 180
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNT 651
G L + + VGT +M+PE + DV+ GV+L LS F+ T
Sbjct: 181 IQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGT 236
Query: 652 NSLTLLGHAWNLWK-DDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
G +K + R W + E++ +V+R + + + A+R T+ E
Sbjct: 237 KERLFEGIIKGKYKMNPRQWSHIS-----ESAKDLVRRMLML-------DPAERITVYEA 284
Query: 711 IS 712
++
Sbjct: 285 LN 286
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 31/203 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKS--------------------GQGLE-EFKNEIKLTAKLQH 497
++F + LG+G FG VY + +G+E + + EI++ + L+H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N++R+ ++ L+ E+ P L + K G +E +A L Y
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYK---ELQKHGRFDEQRSATFMEELADALHYC 130
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
H+ +VIHRD+KP N+L+ KI+DFG + + + GT Y+ PE
Sbjct: 131 HER---KVIHRDIKPENLLMGYKGELKIADFG----WSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 618 AIHGFFSIKSDVFSFGVLLLETL 640
K D++ GVL E L
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFL 206
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 12/159 (7%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+ K EI+ +H ++++L + ++ EY+ L ++ K G +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEA 113
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
R+ + I + Y H++ V+HRDLKP N+LLD++M KI+DFGL+ M E ++
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDS 170
Query: 604 KRIVGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETL 640
G+ Y +PE I G + + D++S GV+L L
Sbjct: 171 ---CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALL 205
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 28/213 (13%)
Query: 465 NKLGEGGFGPVY--------------------KSGQGLEEFKNEIKLTAKLQHRNLVRLL 504
K+GEG FG S + EE + E+ + A ++H N+V+
Sbjct: 30 QKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYR 89
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
E G ++ +Y L F ++G+L +I++ Q L L +
Sbjct: 90 ESFEENGSLYIVMDYCEGGDL--FKRINAQKGVLF--QEDQILDWFVQICLALKHVHDRK 145
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGD-ELQSNTKRIVGTYGYMSPEYAIHGFF 623
++HRD+K NI L + ++ DFG+AR+ EL + +GT Y+SPE + +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVEL---ARACIGTPYYLSPEICENKPY 202
Query: 624 SIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTL 656
+ KSD+++ G +L E + K + + +L L
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEAGSMKNLVL 235
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGAR 543
+NEI + K++H N+V L G LI + + L FD ++G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDA 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL---LDSNMIPKISDFGLARMFGGDELQ 600
R+I + + YLH L ++HRDLKP N+L LD + ISDFGL++M ++
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
S GT GY++PE +S D +S GV+
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGAR 543
+NEI + K++H N+V L G LI + + L FD ++G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDA 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL---LDSNMIPKISDFGLARMFGGDELQ 600
R+I + + YLH L ++HRDLKP N+L LD + ISDFGL++M ++
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
S GT GY++PE +S D +S GV+
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 69/129 (53%), Gaps = 12/129 (9%)
Query: 511 GENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDL 570
E +LI EY + S E ++ IR+I+ I +G+ YLHQ + ++H DL
Sbjct: 102 SEIILILEYAAGGEIFSLCLPELAE-MVSENDVIRLIKQILEGVYYLHQNN---IVHLDL 157
Query: 571 KPSNILLDSNMIP----KISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIK 626
KP NILL S++ P KI DFG++R G + I+GT Y++PE + +
Sbjct: 158 KPQNILL-SSIYPLGDIKIVDFGMSRKIGH---ACELREIMGTPEYLAPEILNYDPITTA 213
Query: 627 SDVFSFGVL 635
+D+++ G++
Sbjct: 214 TDMWNIGII 222
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 29/197 (14%)
Query: 466 KLGEGGFGPVYK-----SGQ--GLEEFKN-------------EIKLTAKLQHRNLVRLLG 505
K+GEG +G V+K +GQ +++F EI++ +L+H NLV LL
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++EY + L D + G+ + I Q + + H+++
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHEL--DRYQRGVPEHLVK-SITWQTLQAVNFCHKHN---C 123
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-HGFFS 624
IHRD+KP NIL+ + + K+ DFG AR+ G + + V T Y SPE + +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--VATRWYRSPELLVGDTQYG 181
Query: 625 IKSDVFSFGVLLLETLS 641
DV++ G + E LS
Sbjct: 182 PPVDVWAIGCVFAELLS 198
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGAR 543
+NEI + K++H N+V L G LI + + L FD ++G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDA 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL---LDSNMIPKISDFGLARMFGGDELQ 600
R+I + + YLH L ++HRDLKP N+L LD + ISDFGL++M ++
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
S GT GY++PE +S D +S GV+
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 461 FGVENKLGEGGFGPVYKSGQG----------------LEEF--KNEIKLTAKLQHRNLVR 502
+ + +LG G FG V++ + L+++ KNEI + +L H L+
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLIN 112
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFD--TTKEGLLGWGARIRIIEGIAQGLLYLHQY 560
L ++ E VLI E+L LFD ++ + I + +GL ++H++
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGE----LFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH 168
Query: 561 SRLRVIHRDLKPSNILLDSNMIP--KISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYA 618
S ++H D+KP NI+ ++ KI DFGLA DE+ K T + +PE
Sbjct: 169 S---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---VKVTTATAEFAAPEIV 222
Query: 619 IHGFFSIKSDVFSFGVL 635
+D+++ GVL
Sbjct: 223 DREPVGFYTDMWAIGVL 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGAR 543
+NEI + K++H N+V L G LI + + L FD ++G
Sbjct: 63 MENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDA 118
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL---LDSNMIPKISDFGLARMFGGDELQ 600
R+I + + YLH L ++HRDLKP N+L LD + ISDFGL++M ++
Sbjct: 119 SRLIFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPG 172
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
S GT GY++PE +S D +S GV+
Sbjct: 173 SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 484 EFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
+ K EI+ +H ++++L + ++ EY+ L ++ K G +
Sbjct: 57 KIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI---CKHGRVEEMEA 113
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT 603
R+ + I + Y H++ V+HRDLKP N+LLD++M KI+DFGL+ M E +
Sbjct: 114 RRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS 170
Query: 604 KRIVGTYGYMSPEYAIHG--FFSIKSDVFSFGVLLLETL 640
G+ Y +PE I G + + D++S GV+L L
Sbjct: 171 ---CGSPNYAAPE-VISGRLYAGPEVDIWSCGVILYALL 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 232
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 465 NKLGEGGFGPVYKS----GQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K Q + K EI + ++ + + G
Sbjct: 28 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D + G L I+ I +GL YLH +
Sbjct: 88 SYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 140
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL + K++DFG+A +++ N VGT +M+PE +
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 198
Query: 626 KSDVFSFGVLLLE 638
K+D++S G+ +E
Sbjct: 199 KADIWSLGITAIE 211
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + A + H +V+L +G+ LI ++L L + L +KE +
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 134
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ +A GL +LH L +I+RDLKP NILLD K++DFGL++ E ++ +
Sbjct: 135 YLAELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS-- 189
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE S +D +S+GVL+ E L+
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 115/274 (41%), Gaps = 46/274 (16%)
Query: 465 NKLGEGGFGPVYKS----GQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K Q + K EI + ++ + + G
Sbjct: 13 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D + G L I+ I +GL YLH +
Sbjct: 73 SYLKDTKLWIIMEYLGGGSA----LDLLEPGPLDETQIATILREILKGLDYLHSEKK--- 125
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL + K++DFG+A +++ N VGT +M+PE +
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNX--FVGTPFWMAPEVIKQSAYDS 183
Query: 626 KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPI 685
K+D++S G+ +E + + + L N P L+ S P+
Sbjct: 184 KADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN-----------PPTLEGNYSKPL 232
Query: 686 VKRYINVALLCVQENAADRPTMSEVISMLTNEFV 719
K ++ C+ + + RPT E +L ++F+
Sbjct: 233 -KEFVEA---CLNKEPSFRPTAKE---LLKHKFI 259
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 467 LGE-GGFGPVYK------------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCC 507
+GE G FG VYK S + LE++ EI + A H N+V+LL
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 508 VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII-EGIAQGLLYLHQYSRLRVI 566
+ ++ E+ ++D+ + + + ++I+++ + L YLH ++I
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLT---ESQIQVVCKQTLDALNYLHDN---KII 130
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI-----HG 621
HRDLK NIL + K++DFG++ +Q +GT +M+PE +
Sbjct: 131 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDS-FIGTPYWMAPEVVMCETSKDR 189
Query: 622 FFSIKSDVFSFGVLLLE 638
+ K+DV+S G+ L+E
Sbjct: 190 PYDYKADVWSLGITLIE 206
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIV 607
+A+G+ +L S + IHRDL NILL N + KI DFGLAR D ++ R+
Sbjct: 208 VARGMEFL---SSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL- 263
Query: 608 GTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+M+PE +S KSDV+S+GVLL E S
Sbjct: 264 -PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 475 VYKSGQGLEEFK---NEIKLTAKL-QHRNLVRLLGCCVEQGENVL-IYEYLPNKSLDSFL 529
+ K G E+K E+K+ + H N+V LLG C +QG ++ I EY +L ++L
Sbjct: 64 MLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 44/230 (19%)
Query: 428 SSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPVYKSGQ------- 480
SSG + YF QG + ++ + +EN +G G +G V + Q
Sbjct: 8 SSGRENLYF----------QGSTKGDIN---QYYTLENTIGRGSWGEVKIAVQKGTRIRR 54
Query: 481 -----------GLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFL 529
++ FK EI++ L H N++RL + + L+ E L
Sbjct: 55 AAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL---F 111
Query: 530 FDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL--DSNMIP-KIS 586
+ + RI++ + + Y H +L V HRDLKP N L DS P K+
Sbjct: 112 ERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLI 168
Query: 587 DFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
DFGLA F ++ VGT Y+SP+ + G + + D +S GV++
Sbjct: 169 DFGLAARFKPGKMMRTK---VGTPYYVSPQ-VLEGLYGPECDEWSAGVMM 214
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 461 FGVENKLGEGGFGPVYKSGQ------------------GLEEFKNEIKLTAKLQHRNLVR 502
+ +EN +G G +G V + Q ++ FK EI++ L H N++R
Sbjct: 11 YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIR 70
Query: 503 LLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSR 562
L + + L+ E L + + RI++ + + Y H +
Sbjct: 71 LYETFEDNTDIYLVMELCTGGEL---FERVVHKRVFRESDAARIMKDVLSAVAYCH---K 124
Query: 563 LRVIHRDLKPSNILL--DSNMIP-KISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAI 619
L V HRDLKP N L DS P K+ DFGLA F ++ VGT Y+SP+ +
Sbjct: 125 LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTK---VGTPYYVSPQ-VL 180
Query: 620 HGFFSIKSDVFSFGVLL 636
G + + D +S GV++
Sbjct: 181 EGLYGPECDEWSAGVMM 197
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH +IHRDLKP NILL+ +M +I+DFG A++ + Q+ VGT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
Y+SPE SD+++ G ++ + ++
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 93/200 (46%), Gaps = 30/200 (15%)
Query: 456 AATNNFGVENKLGEGGFGPVYKSGQ-GLEE---------------FKNEIKLTAKLQHRN 499
A ++ F VE++LG G VY+ Q G ++ + EI + +L H N
Sbjct: 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPN 109
Query: 500 LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD-TTKEGLLGWGARIRIIEGIAQGLLYLH 558
+++L E L+ E + L FD ++G ++ I + + YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL----FDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 559 QYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
+ ++HRDLKP N+L + + KI+DFGL+++ E Q K + GT GY +P
Sbjct: 166 ENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAP 219
Query: 616 EYAIHGFFSIKSDVFSFGVL 635
E + + D++S G++
Sbjct: 220 EILRGCAYGPEVDMWSVGII 239
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 433 SYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPV----------------- 475
S YF L Q K L N F LG+GGFG V
Sbjct: 164 SIYFNRFL------QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKL 217
Query: 476 ----YKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD 531
K +G NE ++ K+ R +V L + L+ + L ++
Sbjct: 218 EKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277
Query: 532 TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA 591
+ G A E I GL LH R R+++RDLKP NILLD + +ISD GLA
Sbjct: 278 MGQAGFPEARAVFYAAE-ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E Q+ R VGT GYM+PE + ++ D ++ G LL E ++ +
Sbjct: 334 VHV--PEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 34/232 (14%)
Query: 433 SYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPV----------------- 475
S YF L Q K L N F LG+GGFG V
Sbjct: 164 SIYFNRFL------QWKWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKL 217
Query: 476 ----YKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFD 531
K +G NE ++ K+ R +V L + L+ + L ++
Sbjct: 218 EKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYH 277
Query: 532 TTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA 591
+ G A E I GL LH R R+++RDLKP NILLD + +ISD GLA
Sbjct: 278 MGQAGFPEARAVFYAAE-ICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA 333
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E Q+ R VGT GYM+PE + ++ D ++ G LL E ++ +
Sbjct: 334 VHV--PEGQTIKGR-VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQ 382
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 28/193 (14%)
Query: 465 NKLGEGGFGPVYKS----GQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
++G+G FG V+K Q + K EI + ++ + + G
Sbjct: 29 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYG 88
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
++ + +I EYL S D + G +++ I +GL YLH +
Sbjct: 89 SYLKGSKLWIIMEYLGGGSA----LDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK--- 141
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSI 625
IHRD+K +N+LL K++DFG+A +++ NT VGT +M+PE +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNT--FVGTPFWMAPEVIQQSAYDS 199
Query: 626 KSDVFSFGVLLLE 638
K+D++S G+ +E
Sbjct: 200 KADIWSLGITAIE 212
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 29/200 (14%)
Query: 466 KLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHRNLVRLLG 505
K+GEG +G V+K+ L+ + EI L +L+H+N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++E+ ++ L + FD+ G L + + +GL + H + V
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG-FFS 624
+HRDLKP N+L++ N K++DFGLAR FG ++ + +V T Y P+ +S
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 625 IKSDVFSFGVLLLETLSSKR 644
D++S G + E ++ R
Sbjct: 181 TSIDMWSAGCIFAELANAAR 200
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 9/160 (5%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
EI++ + +H N++ + + Y+ +++ L+ K L +
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 548 EGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNT---K 604
I +GL Y+H + V+HRDLKPSN+L+++ KI DFGLAR+ D +T
Sbjct: 151 YQILRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARI--ADPEHDHTGFLT 205
Query: 605 RIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE ++ KS D++S G +L E LS++
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 38/159 (23%)
Query: 466 KLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K +GQ + K EIK+ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI----------RIIEGIAQGLL 555
C + Y K+ +FD + L G + + R+++ + GL
Sbjct: 85 ICRTKAS-----PYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
Y+H R +++HRD+K +N+L+ + + K++DFGLAR F
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 MFGGDELQSNT--KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
E++ K I GT +++PE + +++D++S GV+
Sbjct: 168 -----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 MFGGDELQSNT--KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
E++ K I GT +++PE + +++D++S GV+
Sbjct: 168 -----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 25/147 (17%)
Query: 465 NKLGEGGFGPVYKSGQ-------GLEEFK------------NEIKLTAKLQHRNLVRLLG 505
+KLGEG + VYK L+E + E+ L L+H N+V L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++EYL +K L +L D ++ + + +GL Y H R +V
Sbjct: 68 IIHTEKSLTLVFEYL-DKDLKQYLDDCG--NIINMHNVKLFLFQLLRGLAYCH---RQKV 121
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLAR 592
+HRDLKP N+L++ K++DFGLAR
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 MFGGDELQSNT--KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
E++ K I GT +++PE + +++D++S GV+
Sbjct: 168 -----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 MFGGDELQSNT--KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
E++ K I GT +++PE + +++D++S GV+
Sbjct: 168 -----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 MFGGDELQSNT--KRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
E++ K I GT +++PE + +++D++S GV+
Sbjct: 168 -----EIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 38/159 (23%)
Query: 466 KLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K +GQ + K EIK+ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI----------RIIEGIAQGLL 555
C + Y K +FD + L G + + R+++ + GL
Sbjct: 85 ICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
Y+H R +++HRD+K +N+L+ + + K++DFGLAR F
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYE-YLPNKSLDSFLFDTTKEGLLGWGARIR 545
+E+ + +L H N+++L ++ L+ E Y + D + ++ A +
Sbjct: 53 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAV- 108
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ + G YLH+++ ++HRDLKP N+LL+S + + KI DFGL+ F E+
Sbjct: 109 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 162
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
K +GT Y++PE + + K DV+S GV+L
Sbjct: 163 MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 195
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
T+ + + +LG+G F V + S + ++ + E ++ L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+G + L+++ + L D I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HRDLKP N+LL S K++DFGLA GD Q GT GY+S
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLS 174
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE + D+++ GV+L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL 196
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 38/159 (23%)
Query: 466 KLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K +GQ + K EIK+ L+H N+V L+
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI----------RIIEGIAQGLL 555
C + Y K +FD + L G + + R+++ + GL
Sbjct: 84 ICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
Y+H R +++HRD+K +N+L+ + + K++DFGLAR F
Sbjct: 139 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 174
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 38/159 (23%)
Query: 466 KLGEGGFGPVYK-----SGQGLEEFK---------------NEIKLTAKLQHRNLVRLLG 505
K+G+G FG V+K +GQ + K EIK+ L+H N+V L+
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI----------RIIEGIAQGLL 555
C + Y K +FD + L G + + R+++ + GL
Sbjct: 85 ICRTKAS-----PYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
Y+H R +++HRD+K +N+L+ + + K++DFGLAR F
Sbjct: 140 YIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAF 175
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYE-YLPNKSLDSFLFDTTKEGLLGWGARIR 545
+E+ + +L H N+++L ++ L+ E Y + D + ++ A +
Sbjct: 70 DEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIIL---RQKFSEVDAAV- 125
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ + G YLH+++ ++HRDLKP N+LL+S + + KI DFGL+ F E+
Sbjct: 126 IMKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHF---EVGGK 179
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
K +GT Y++PE + + K DV+S GV+L
Sbjct: 180 MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVIL 212
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ G EE + E+ + ++ H N++ L + + VLI E + L FL KE
Sbjct: 54 RRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--AQKES 111
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNI-LLDSNM-IP--KISDFGLAR 592
L A I+ I G+ YLH ++ H DLKP NI LLD N+ IP K+ DFGLA
Sbjct: 112 LSEEEA-TSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167
Query: 593 -MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVL 635
+ G E K I GT +++PE + +++D++S GV+
Sbjct: 168 EIEDGVEF----KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 33/207 (15%)
Query: 459 NNFGVENKLGEGGFGPVYK-----SGQGL-------------EEFKNEIKLTAKLQHRNL 500
+++ + +LG G FG V++ +G E + EI+ + L+H L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 216
Query: 501 VRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQY 560
V L + E V+IYE++ L + D + + + + + +GL ++H+
Sbjct: 217 VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 274
Query: 561 SRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ +H DLKP NI+ SN + K+ DFGL D QS K GT + +PE
Sbjct: 275 N---YVHLDLKPENIMFTTKRSNEL-KLIDFGLTAHL--DPKQS-VKVTTGTAEFAAPEV 327
Query: 618 AIHGFFSIKSDVFSFGVL---LLETLS 641
A +D++S GVL LL LS
Sbjct: 328 AEGKPVGYYTDMWSVGVLSYILLSGLS 354
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+A+G+ +L + + IHRDL NILL + KI DFGLAR D
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+M+PE ++I+SDV+SFGVLL E S
Sbjct: 257 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+A+G+ +L + + IHRDL NILL + KI DFGLAR D
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+M+PE ++I+SDV+SFGVLL E S
Sbjct: 264 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 31/202 (15%)
Query: 458 TNNFGVENKLGEGGFGPVYK--------------------SGQGLEEFKNEIKLTAKLQH 497
T+ + + +LG+G F V + S + ++ + E ++ L+H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
N+VRL E+G + L+++ + L D I+ I + + +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL---FEDIVAREYYSEADASHCIQQILESVNHC 119
Query: 558 HQYSRLRVIHRDLKPSNILLDSN---MIPKISDFGLARMFGGDELQSNTKRIVGTYGYMS 614
H ++HRDLKP N+LL S K++DFGLA GD Q GT GY+S
Sbjct: 120 HLNG---IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD--QQAWFGFAGTPGYLS 174
Query: 615 PEYAIHGFFSIKSDVFSFGVLL 636
PE + D+++ GV+L
Sbjct: 175 PEVLRKDPYGKPVDMWACGVIL 196
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+A+G+ +L + + IHRDL NILL + KI DFGLAR D
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+M+PE ++I+SDV+SFGVLL E S
Sbjct: 266 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+A+G+ +L + + IHRDL NILL + KI DFGLAR D
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+M+PE ++I+SDV+SFGVLL E S
Sbjct: 259 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 33/207 (15%)
Query: 459 NNFGVENKLGEGGFGPVYK-----SGQGL-------------EEFKNEIKLTAKLQHRNL 500
+++ + +LG G FG V++ +G E + EI+ + L+H L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTL 110
Query: 501 VRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQY 560
V L + E V+IYE++ L + D + + + + + +GL ++H+
Sbjct: 111 VNLHDAFEDDNEMVMIYEFMSGGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHEN 168
Query: 561 SRLRVIHRDLKPSNILLD---SNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEY 617
+ +H DLKP NI+ SN + K+ DFGL D QS K GT + +PE
Sbjct: 169 N---YVHLDLKPENIMFTTKRSNEL-KLIDFGLTAHL--DPKQS-VKVTTGTAEFAAPEV 221
Query: 618 AIHGFFSIKSDVFSFGVL---LLETLS 641
A +D++S GVL LL LS
Sbjct: 222 AEGKPVGYYTDMWSVGVLSYILLSGLS 248
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 123/298 (41%), Gaps = 71/298 (23%)
Query: 455 SAATNNFGVE-------NKLGEGGFGPVYK-----SGQGLEEFKNEIKLTAKLQHRNL-- 500
A NF V+ +LG G +G V K SGQ + + ++ Q R L
Sbjct: 23 QGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXD 82
Query: 501 -------------VRLLGCCVEQGENVLIYEYLPNKSLDSF---LFD---TTKEGLLGWG 541
V G +G +V I L + SLD F + D T E +LG
Sbjct: 83 LDISXRTVDCPFTVTFYGALFREG-DVWICXELXDTSLDKFYKQVIDKGQTIPEDILG-- 139
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+I I + L +LH S+L VIHRD+KPSN+L+++ K DFG++ D +
Sbjct: 140 ---KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 602 NTKRIVGTYGYMSPEYAIHGF----FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
G Y +PE +S+KSD++S G+ +E L +L
Sbjct: 195 ID---AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIE---------------LAIL 236
Query: 658 GHAWNLW-----KDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
++ W + + E P+L + +++ C+++N+ +RPT E+
Sbjct: 237 RFPYDSWGTPFQQLKQVVEEPSPQLPADK---FSAEFVDFTSQCLKKNSKERPTYPEL 291
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + +++H +V L+ G+ LI EYL L +EG+
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ I+ L +LHQ +I+RDLKP NI+L+ K++DFGL + D ++T
Sbjct: 126 YLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT-- 180
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE + + D +S G L+ + L+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + ++ H +V+L +G+ LI ++L L + L +KE +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 130
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ +A L +LH L +I+RDLKP NILLD K++DFGL++ E ++ +
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE + +D +SFGVL+ E L+
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 488 EIKLTAKLQHRNLVRLL-----GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 155
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 156 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 210
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAW 661
V T Y +PE ++ +++ D++S G ++ E L+ + T F T+ + L
Sbjct: 211 ---YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR--TLFPGTDHINQLQQIM 265
Query: 662 NL 663
L
Sbjct: 266 RL 267
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYG 611
QG+ YLH RVIHRDLK N+ L+ +M KI DFGLA D + T + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCGTPN 207
Query: 612 YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE S + D++S G +L L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYG 611
QG+ YLH RVIHRDLK N+ L+ +M KI DFGLA D K + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKXLCGTPN 207
Query: 612 YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE S + D++S G +L L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%), Gaps = 17/137 (12%)
Query: 529 LFDTTKEGLLGWGARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISD 587
LFD E + R I+ + + + +LH + ++HRDLKP NILLD NM ++SD
Sbjct: 187 LFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSD 243
Query: 588 FGLA-RMFGGDELQSNTKRIVGTYGYMSPEY------AIHGFFSIKSDVFSFGVLLLETL 640
FG + + G++L + + GT GY++PE H + + D+++ GV+L L
Sbjct: 244 FGFSCHLEPGEKL----RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299
Query: 641 SSKRSTRFFNTNSLTLL 657
+ S F++ + +L
Sbjct: 300 AG--SPPFWHRRQILML 314
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 451 LASVSAATNNFGVENKLGEGGFGPVYK-----------------------SGQGLEEFKN 487
L V N + LGEG FG V + S + +EEF +
Sbjct: 26 LEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLS 85
Query: 488 EIKLTAKLQHRNLVRLLGCCVE---QG--ENVLIYEYLPNKSLDSFLFDTTKE---GLLG 539
E H N++RLLG C+E QG + ++I ++ L ++L + E +
Sbjct: 86 EAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP 145
Query: 540 WGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA-RMFGGDE 598
++ + IA G+ YL S +HRDL N +L +M ++DFGL+ +++ GD
Sbjct: 146 LQTLLKFMVDIALGMEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY 202
Query: 599 LQSNTKRIVGT-YGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
+ RI +++ E ++ KSDV++FGV + E
Sbjct: 203 YRQG--RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWE 241
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYG 611
QG+ YLH RVIHRDLK N+ L+ +M KI DFGLA D K + GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 191
Query: 612 YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE S + D++S G +L L K
Sbjct: 192 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 223
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + +++H +V L+ G+ LI EYL L +EG+
Sbjct: 69 KAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL---FMQLEREGIFMEDTACF 125
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ I+ L +LHQ +I+RDLKP NI+L+ K++DFGL + D + T
Sbjct: 126 YLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD--GTVTHX 180
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE + + D +S G L+ + L+
Sbjct: 181 FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT 216
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 552 QGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYG 611
QG+ YLH RVIHRDLK N+ L+ +M KI DFGLA D K + GT
Sbjct: 153 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFD--GERKKDLCGTPN 207
Query: 612 YMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE S + D++S G +L L K
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTLLVGK 239
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 29/200 (14%)
Query: 466 KLGEGGFGPVYKSGQ-------GLEEFK-------------NEIKLTAKLQHRNLVRLLG 505
K+GEG +G V+K+ L+ + EI L +L+H+N+VRL
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 506 CCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
+ L++E+ ++ L + FD+ G L + + +GL + H + V
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKY-FDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---V 122
Query: 566 IHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHG-FFS 624
+HRDLKP N+L++ N K+++FGLAR FG ++ + +V T Y P+ +S
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLARAFGI-PVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 625 IKSDVFSFGVLLLETLSSKR 644
D++S G + E ++ R
Sbjct: 181 TSIDMWSAGCIFAELANAGR 200
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + ++ H +V+L +G+ LI ++L L + L +KE +
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 131
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ +A L +LH L +I+RDLKP NILLD K++DFGL++ E ++ +
Sbjct: 132 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 186
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE + +D +SFGVL+ E L+
Sbjct: 187 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K E + ++ H +V+L +G+ LI ++L L + L +KE +
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 130
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
+ +A L +LH L +I+RDLKP NILLD K++DFGL++ E ++ +
Sbjct: 131 YLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS-- 185
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
GT YM+PE + +D +SFGVL+ E L+
Sbjct: 186 FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 66 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 123
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 124 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 177
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 178 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 218
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + LI EY + +L +
Sbjct: 55 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 114
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
++ R I Q Y HQ R++HRDLK N+LLD++M KI+DFG + F G +L
Sbjct: 115 SKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 168
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G+ Y +PE + + + DV+S GV+L +S
Sbjct: 169 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 10/160 (6%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLL 538
G L K EI+ L+H+++ +L + ++ EY P L F + +++ L
Sbjct: 49 GSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGEL--FDYIISQDRLS 106
Query: 539 GWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE 598
R+ + I + Y+H HRDLKP N+L D K+ DFGL G++
Sbjct: 107 EEETRV-VFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162
Query: 599 LQSNTKRIVGTYGYMSPEYAIHG--FFSIKSDVFSFGVLL 636
+ + G+ Y +PE I G + ++DV+S G+LL
Sbjct: 163 -DYHLQTCCGSLAYAAPE-LIQGKSYLGSEADVWSMGILL 200
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 119
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 120 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 173
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 62 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 119
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 120 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 173
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 174 KKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 214
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 40/259 (15%)
Query: 480 QGLEEFKNEIKLTAKLQHRNLVRLLGCCVE-QGENVLIYEYLPNKSLDSFLF----DTTK 534
Q +E F E L L H N++ L+G + +G ++ Y+ + L F+ + T
Sbjct: 64 QQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV 123
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
+ L+ +G ++ A+G+ YL + + +HRDL N +LD + K++DFGLAR
Sbjct: 124 KDLISFGLQV------ARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
Query: 595 GGDELQS--NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS-SKRSTRFFNT 651
E S + + + E F+ KSDV+SFGVLL E L+ R +
Sbjct: 175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP 234
Query: 652 NSLTLLGHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
LT + R L P+ ++ Y ++++ C + + A RPT ++
Sbjct: 235 FDLT------HFLAQGR--RLPQPEYCPDSLYQVMQQ-------CWEADPAVRPTFRVLV 279
Query: 712 --------SMLTNEFVNLP 722
++L + +V LP
Sbjct: 280 GEVEQIVSALLGDHYVQLP 298
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++M KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G+ Y +PE + + + DV+S GV+L +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + LI EY + +L +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
++ R I Q Y HQ R++HRDLK N+LLD++M KI+DFG + F G +L
Sbjct: 118 SKFRQIVSAVQ---YCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLD 171
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G Y +PE + + + DV+S GV+L +S
Sbjct: 172 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++M KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G+ Y +PE + + + DV+S GV+L +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 86 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 143
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 144 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 197
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 198 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 238
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 52/219 (23%)
Query: 467 LGEGGFGPVYKSGQGLEE-----------------FKNEIKLTAKLQHRNLVRLLGCCVE 509
LG+G FG V K+ L+ +E+ L A L H+ +VR +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 510 QGENV-------------LIYEYLPNKSLDSFLF--DTTKEGLLGWGARIRIIEGIAQGL 554
+ V + EY N++L + + ++ W R+ I + L
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEAL 129
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG--DELQSNTKRI------ 606
Y+H +IHRDLKP NI +D + KI DFGLA+ D L+ +++ +
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 607 ----VGTYGYMSPEYAI-HGFFSIKSDVFSFGVLLLETL 640
+GT Y++ E G ++ K D++S G++ E +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++M KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G+ Y +PE + + + DV+S GV+L +S
Sbjct: 171 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 84 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 141
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 142 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 195
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 196 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 236
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 58 LQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 117
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD +M KI+DFG + F G++L
Sbjct: 118 AKFRQIVSAVQ---YCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLD 171
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G+ Y +PE + + + DV+S GV+L +S
Sbjct: 172 T----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++M KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G Y +PE + + + DV+S GV+L +S
Sbjct: 171 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 73/161 (45%), Gaps = 8/161 (4%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ EI + L H+++V G + ++ E +SL ++ L A
Sbjct: 60 EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL--LELHKRRKALTEPEA 117
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
R + I G YLH R RVIHRDLK N+ L+ ++ KI DFGLA D
Sbjct: 118 RY-YLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD--GER 171
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
K + GT Y++PE S + DV+S G ++ L K
Sbjct: 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGK 212
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 33/191 (17%)
Query: 467 LGEGGFGPVYKSGQGL------------------EEFKNEIKLTAKLQHRNLVRLLGCCV 508
LG G F V+ Q L +NEI + K++H N+V L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 509 EQGENVLIYEYLPNKSLDSFLFDTTKE-GLLGWGARIRIIEGIAQGLLYLHQYSRLRVIH 567
L+ + + L FD E G+ +I+ + + YLH+ ++H
Sbjct: 77 STTHYYLVMQLVSGGEL----FDRILERGVYTEKDASLVIQQVLSAVKYLHENG---IVH 129
Query: 568 RDLKPSNILL---DSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
RDLKP N+L + N I+DFGL++M E GT GY++PE +S
Sbjct: 130 RDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGTPGYVAPEVLAQKPYS 185
Query: 625 IKSDVFSFGVL 635
D +S GV+
Sbjct: 186 KAVDCWSIGVI 196
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 91/179 (50%), Gaps = 20/179 (11%)
Query: 487 NEIKLTAKLQ-HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
E+ + K+ H N+++L L+++ + L +L T++ L +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRK 128
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA-RMFGGDELQSNTK 604
I+ + + + LH +L ++HRDLKP NILLD +M K++DFG + ++ G++L+S
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRS--- 182
Query: 605 RIVGTYGYMSPEYAI------HGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+ GT Y++PE H + + D++S GV++ L+ S F++ + +L
Sbjct: 183 -VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLML 238
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQG----ENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
+ EI T ++H N++ + ++ + LI +Y N SL +L TT L
Sbjct: 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT----LDAK 134
Query: 542 ARIRIIEGIAQGLLYLHQ-----YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
+ +++ GL +LH + + HRDLK NIL+ N I+D GLA F
Sbjct: 135 SMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFIS 194
Query: 597 D----ELQSNTKRIVGTYGYMSPEYAI------HGFFSIKSDVFSFGVLLLET 639
D ++ NT+ VGT YM PE H I +D++SFG++L E
Sbjct: 195 DTNEVDIPPNTR--VGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 21/170 (12%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENV----LIYEYLPNKSLDSFLFDTTKEGLLGWG 541
+ EI T L+H N++ + + + LI Y + SL FL T E L
Sbjct: 50 ETEIYNTVLLRHDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-- 107
Query: 542 ARIRIIEGIAQGLLYLH-----QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF-- 594
+R+ A GL +LH + + HRD K N+L+ SN+ I+D GLA M
Sbjct: 108 --LRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQ 165
Query: 595 GGDELQSNTKRIVGTYGYMSPEY-----AIHGFFSIK-SDVFSFGVLLLE 638
G D L VGT YM+PE F S K +D+++FG++L E
Sbjct: 166 GSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWE 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLL 538
G E+ K E + L+H ++V LL G +++E++ L F+ K
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADA 125
Query: 539 GW----GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS--NMIP-KISDFGLA 591
G+ + I + L Y H + +IHRD+KP +LL S N P K+ FG+A
Sbjct: 126 GFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 182
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNT 651
G L + + VGT +M+PE + DV+ GV+L LS F+ T
Sbjct: 183 IQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGT 238
Query: 652 NSLTLLGHAWNLWK-DDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
G +K + R W + E++ +V+R + + + A+R T+ E
Sbjct: 239 KERLFEGIIKGKYKMNPRQWSHIS-----ESAKDLVRRMLML-------DPAERITVYEA 286
Query: 711 IS 712
++
Sbjct: 287 LN 288
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++M KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
G+ Y +PE + + + DV+S GV+L +S
Sbjct: 171 E----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KXQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLL 538
G E+ K E + L+H ++V LL G +++E++ L F+ K
Sbjct: 67 GLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL---CFEIVKRADA 123
Query: 539 GW----GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS--NMIP-KISDFGLA 591
G+ + I + L Y H + +IHRD+KP +LL S N P K+ FG+A
Sbjct: 124 GFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVA 180
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNT 651
G L + + VGT +M+PE + DV+ GV+L LS F+ T
Sbjct: 181 IQLGESGLVAGGR--VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG--CLPFYGT 236
Query: 652 NSLTLLGHAWNLWK-DDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEV 710
G +K + R W + E++ +V+R + + + A+R T+ E
Sbjct: 237 KERLFEGIIKGKYKMNPRQWSHIS-----ESAKDLVRRMLML-------DPAERITVYEA 284
Query: 711 IS 712
++
Sbjct: 285 LN 286
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 177
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 234
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 235 TSSIDVWSAGCVLAELL 251
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 134 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG- 188
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 189 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 115
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 116 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 171
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 172 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 228
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 229 TSSIDVWSAGCVLAELL 245
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCAKLTDDH 122
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 123 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 177
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 178 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 134 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG- 188
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 189 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 121
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 122 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 177
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 178 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 234
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 235 TSSIDVWSAGCVLAELL 251
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 187 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 246
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 247 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 297
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 298 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 353
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 354 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 399
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 10/99 (10%)
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
++ I + L YL + + VIHRD+KPSNILLD K+ DFG++ D+ +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD--- 182
Query: 605 RIVGTYGYMSPEY-----AIHGFFSIKSDVFSFGVLLLE 638
R G YM+PE + I++DV+S G+ L+E
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 123 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG- 177
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 178 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 123
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 124 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 179
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 180 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 236
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 237 TSSIDVWSAGCVLAELL 253
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 106
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 107 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 162
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 163 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 219
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 220 TSSIDVWSAGCVLAELL 236
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I+ GL +LH+ +I+RDLK N++LDS KI+DFG+ + D + T+ GT
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV--TTREFCGT 183
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE + + D +++GVLL E L+ +
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQ 217
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 134 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTADEMTG- 188
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 189 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMAG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 155
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 212
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 213 TSSIDVWSAGCVLAELL 229
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 125
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 126 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 181
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 182 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 238
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 239 TSSIDVWSAGCVLAELL 255
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 95
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 96 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 151
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 152 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 208
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 209 TSSIDVWSAGCVLAELL 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGW- 540
L++ E+++ L H N+V+L + L+ EY + +L GW
Sbjct: 50 LQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH------GWM 103
Query: 541 ---GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-G 596
AR + + I + Y HQ ++HRDLK N+LLD++M KI+DFG + F G
Sbjct: 104 KEKEARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG 159
Query: 597 DELQSNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
++L + G+ Y +PE + + + DV+S GV+L +S
Sbjct: 160 NKLDT----FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 201
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 99
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 100 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 155
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 156 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 212
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 213 TSSIDVWSAGCVLAELL 229
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFL---FDTTKEGLLG 539
E+ L + H+N++ LL +E+ ++V I L + +L + D + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 540 WGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL 599
+ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 133 YQMLV--------GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T +V Y Y +PE + + D++S GV++ E +
Sbjct: 182 M--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 132 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG- 186
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 187 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY-----KSGQ--GLEEFKNEIKL-------------- 491
+ +F + LG+G FG V+ K+ Q ++ K ++ L
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 492 -TAKLQHRNLVRLLGCCVEQGENVL-IYEYLPNKSLDSFL-----FDTTKEGLLGWGARI 544
+ +H L + C + EN+ + EYL L + FD ++ + A I
Sbjct: 72 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEI 128
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR--MFGGDELQSN 602
+ GL +LH +++RDLK NILLD + KI+DFG+ + M G +
Sbjct: 129 IL------GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAK 175
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T GT Y++PE + ++ D +SFGVLL E L
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 213
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 92
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 93 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 148
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 149 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 205
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 206 TSSIDVWSAGCVLAELL 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 137
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 138 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG- 192
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 193 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 20/179 (11%)
Query: 487 NEIKLTAKLQ-HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
E+ + K+ H N+++L L+++ + L +L T++ L +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRK 128
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA-RMFGGDELQSNTK 604
I+ + + + LH +L ++HRDLKP NILLD +M K++DFG + ++ G++L +
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL----R 181
Query: 605 RIVGTYGYMSPEYAI------HGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+ GT Y++PE H + + D++S GV++ L+ S F++ + +L
Sbjct: 182 EVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLML 238
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 22/161 (13%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFL---FDTTKEGLLG 539
E+ L + H+N++ LL +E+ ++V I L + +L + D + L
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLL 132
Query: 540 WGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL 599
+ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 133 YQMLV--------GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFM 181
Query: 600 QSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T +V Y Y +PE + + D++S GV++ E +
Sbjct: 182 M--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGVIMGEMI 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 132 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-HTDDEMTG- 186
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 187 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 136
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 137 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 191
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 192 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 242
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 52/219 (23%)
Query: 467 LGEGGFGPVYKSGQGLEE-----------------FKNEIKLTAKLQHRNLVRLLGCCVE 509
LG+G FG V K+ L+ +E+ L A L H+ +VR +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 510 QGENV-------------LIYEYLPNKSLDSFLF--DTTKEGLLGWGARIRIIEGIAQGL 554
+ V + EY N++L + + ++ W R+ I + L
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW----RLFRQILEAL 129
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG--DELQSNTKRI------ 606
Y+H +IHR+LKP NI +D + KI DFGLA+ D L+ +++ +
Sbjct: 130 SYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 607 ----VGTYGYMSPEYAI-HGFFSIKSDVFSFGVLLLETL 640
+GT Y++ E G ++ K D +S G++ E +
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 110 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 169
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 170 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 220
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 221 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 276
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 277 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELLK 323
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 467 LGEGGFGPVYK-SGQG----LEEF----------KNEIKLTAKLQHRNLVRLLGCCVEQG 511
+G+G +G V++ S QG ++ F + E+ T L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 512 ENV----LIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH-----QYSR 562
+ LI Y SL +L TT + + + +RI+ IA GL +LH +
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGYMSPEY--- 617
+ HRDLK NIL+ N I+D GLA M ++L VGT YM+PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 618 --AIHGFFSIKS-DVFSFGVLLLET 639
+ F S K D+++FG++L E
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 100
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 101 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 156
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 157 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 213
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 214 TSSIDVWSAGCVLAELL 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 147 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXGX 202
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 203 ----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTGX 182
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 183 ----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 133
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 134 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 188
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 189 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 239
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 149
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 150 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMXG- 204
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 205 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 166
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 167 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 222
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 223 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 279
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 280 TSSIDVWSAGCVLAELL 296
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 85/168 (50%), Gaps = 19/168 (11%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+++L L+++ + L +L T++ L +I+ + + +
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL---TEKVTLSEKETRKIMRALLEVICA 126
Query: 557 LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA-RMFGGDELQSNTKRIVGTYGYMSP 615
LH +L ++HRDLKP NILLD +M K++DFG + ++ G++L + + GT Y++P
Sbjct: 127 LH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL----REVCGTPSYLAP 179
Query: 616 EYAI------HGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
E H + + D++S GV++ L+ S F++ + +L
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG--SPPFWHRKQMLML 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 467 LGEGGFGPVYK-SGQG----LEEF----------KNEIKLTAKLQHRNLVRLLGCCVEQG 511
+G+G +G V++ S QG ++ F + E+ T L+H N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 75
Query: 512 ENV----LIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH-----QYSR 562
+ LI Y SL +L TT + + + +RI+ IA GL +LH +
Sbjct: 76 HSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGTQGK 131
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGYMSPEY--- 617
+ HRDLK NIL+ N I+D GLA M ++L VGT YM+PE
Sbjct: 132 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 191
Query: 618 --AIHGFFSIKS-DVFSFGVLLLET 639
+ F S K D+++FG++L E
Sbjct: 192 TIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 132 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 186
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 187 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 125
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 126 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 180
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 181 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ L + H+N++ LL +E+ ++V YL + +D+ L + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YLVMELMDANLXQVIQMEL-DHER 127
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 128 MSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-- 182
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 67 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 126
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 127 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 177
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 178 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 233
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 234 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 279
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 36/204 (17%)
Query: 467 LGEGGFGPVYK-SGQG----LEEF----------KNEIKLTAKLQHRNLVRLLGCCVEQG 511
+G+G +G V++ S QG ++ F + E+ T L+H N++ + +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSR 104
Query: 512 ENV----LIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH-----QYSR 562
+ LI Y SL +L TT + + + +RI+ IA GL +LH +
Sbjct: 105 HSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGTQGK 160
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGYMSPEY--- 617
+ HRDLK NIL+ N I+D GLA M ++L VGT YM+PE
Sbjct: 161 PAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE 220
Query: 618 --AIHGFFSIKS-DVFSFGVLLLE 638
+ F S K D+++FG++L E
Sbjct: 221 TIQVDCFDSYKRVDIWAFGLVLWE 244
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 65 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 124
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 125 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 175
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 176 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 231
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 232 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELLK 278
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 131
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 132 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 186
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 187 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 139 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 193
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 194 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 129 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 183
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 184 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 139 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 193
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 194 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 138
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 139 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 193
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 194 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 244
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 143
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 200
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 88
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 89 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 144
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 145 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 201
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 202 TSSIDVWSAGCVLAELL 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 129 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 183
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 184 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 133 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 187
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 188 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 133 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 187
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 188 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 88 KKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 143
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 200
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 129 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 183
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 184 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 143
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 200
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 123 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 177
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 178 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 145
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 146 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 200
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 201 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 133 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 187
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 188 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 137
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 138 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 192
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 193 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 243
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 124
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 125 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 179
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 180 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 230
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 123
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 124 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 178
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 179 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 34/214 (15%)
Query: 467 LGEGGFGPVYKSGQGLEEFKNEIK---------LTAKLQHRNLVRLLGCCVEQGENVLIY 517
+G G +G V + G K IK L AK +R L RLL + L+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL-RLLKHMRHENVIGLLD 91
Query: 518 EYLPNKSLDSF-------------LFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
+ P+++LD F L K LG ++ + +GL Y+H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG--- 148
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
+IHRDLKP N+ ++ + KI DFGLAR + S V T Y +PE ++ +
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLAR-----QADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 624 SIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
+ D++S G ++ E ++ K T F ++ L L
Sbjct: 204 TQTVDIWSVGCIMAEMITGK--TLFKGSDHLDQL 235
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 123
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 124 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 178
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 179 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 229
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 52/219 (23%)
Query: 467 LGEGGFGPVYKSGQGLEE-----------------FKNEIKLTAKLQHRNLVRLLGCCVE 509
LG+G FG V K+ L+ +E+ L A L H+ +VR +E
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 510 QGENV-------------LIYEYLPNKSLDSFLF--DTTKEGLLGWGARIRIIEGIAQGL 554
+ V + EY N +L + + ++ W R+ I + L
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFRQILEAL 129
Query: 555 LYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG--DELQSNTKRI------ 606
Y+H +IHRDLKP NI +D + KI DFGLA+ D L+ +++ +
Sbjct: 130 SYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 607 ----VGTYGYMSPEYAI-HGFFSIKSDVFSFGVLLLETL 640
+GT Y++ E G ++ K D++S G++ E +
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 129 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG- 183
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 184 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 122
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 123 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 177
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 178 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 458 TNNFGVENKLGEGGFGPVYKSG----------QGLEEFKN---------EIKLTAKLQHR 498
+++F +++ LGEG +G V + + +E F EIK+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N++ + Y+ + + + L +L I + + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL--------QSNTKRIVGTY 610
+ VIHRDLKPSN+L++SN K+ DFGLAR+ QS V T
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATR 186
Query: 611 GYMSPEYAI-HGFFSIKSDVFSFGVLLLE 638
Y +PE + +S DV+S G +L E
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 56 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 115
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 116 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 167 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 222
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVIS 712
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 223 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELLK 269
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 147 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 201
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 202 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 146
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 147 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 201
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 202 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 252
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEG 536
F+N+ AK +R LV L+ C + L+ + P K+L+ F L D
Sbjct: 54 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 110
Query: 537 L----LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 111 VIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 167
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 168 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 132
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 133 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-HTDDEMTG- 187
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 188 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 145
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 146 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 200
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 201 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 251
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 91
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 92 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 147
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 148 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATDY 204
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 205 TSSIDVWSAGCVLAELL 221
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEG 536
F+N+ AK +R LV L+ C + L+ + P K+L+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQ 117
Query: 537 LLGW---GARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
++ R+ ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 175 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
IA GL +L +I+RDLK N++LDS KI+DFG+ + D + TK GT
Sbjct: 451 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 505
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE + + D ++FGVLL E L+ +
Sbjct: 506 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 539
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 28/238 (11%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDT--TK 534
+ Q E NE+ + QH N+V + + E ++ E+L +L + T +
Sbjct: 60 RKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE 119
Query: 535 EGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
E + + + Q L LH VIHRD+K +ILL + K+SDFG
Sbjct: 120 EQIAA------VCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQV 170
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 171 SKE--VPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP--YFNEPPL 226
Query: 655 TLLGHAWNLWKDDRSWELMDPKLQ-CEASYPIVKRYINVALLCVQENAADRPTMSEVI 711
A + +D+ + P+L+ P +K +++ L+ + A R T +E++
Sbjct: 227 K----AMKMIRDN-----LPPRLKNLHKVSPSLKGFLDRLLV---RDPAQRATAAELL 272
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 149
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGLAR DE+
Sbjct: 150 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-HTDDEMTG- 204
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 205 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 255
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 458 TNNFGVENKLGEGGFGPVYKSG----------QGLEEFKN---------EIKLTAKLQHR 498
+++F +++ LGEG +G V + + +E F EIK+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N++ + Y+ + + + L +L I + + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL--------QSNTKRIVGTY 610
+ VIHRDLKPSN+L++SN K+ DFGLAR+ QS V T
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATR 186
Query: 611 GYMSPEYAI-HGFFSIKSDVFSFGVLLLE 638
Y +PE + +S DV+S G +L E
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 467 LGEGGFGPVYK-----SGQGL--------EEFKN-EIKLTAKLQHRNLVRLLGCCVEQGE 512
+G G FG VY+ SG+ + + FKN E+++ KL H N+VRL GE
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87
Query: 513 NV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRV 565
L+ +Y+P + + K+ L ++ + + + + L Y+H + +
Sbjct: 88 KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG---I 143
Query: 566 IHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-F 623
HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE +
Sbjct: 144 CHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATDY 200
Query: 624 SIKSDVFSFGVLLLETL 640
+ DV+S G +L E L
Sbjct: 201 TSSIDVWSAGCVLAELL 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G E +I E L SFL ++ L + I ++ L YL R
Sbjct: 78 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTXXKASKGKLPIKWMAPESINFRRFT 190
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ L + H+N++ LL +E+ ++V YL + +D+ L + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YLVMELMDANLXQVIQMELDHERM 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 129 SYLLYQMLC-GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-- 182
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
L++ E+++ L H N+V+L + L+ EY + +L +
Sbjct: 57 LQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEAR 116
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG-GDELQ 600
A+ R I Q Y HQ ++HRDLK N+LLD++ KI+DFG + F G++L
Sbjct: 117 AKFRQIVSAVQ---YCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD 170
Query: 601 SNTKRIVGTYGYMSPE-YAIHGFFSIKSDVFSFGVLLLETLS 641
+ G Y +PE + + + DV+S GV+L +S
Sbjct: 171 A----FCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 208
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 467 LGEGGFGPVYKSG--------------QGLEEFKN-EIKLTAKLQHRNLVRLLGCCVEQG 511
+G G FG VY++ QG + FKN E+++ KL H N+VRL G
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 512 ENV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
E L+ +Y+P + + K+ L ++ + + + + L Y+H +
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG--- 142
Query: 565 VIHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF- 622
+ HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 199
Query: 623 FSIKSDVFSFGVLLLETL 640
++ DV+S G +L E L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 31/209 (14%)
Query: 458 TNNFGVENKLGEGGFGPVYKSG----------QGLEEFKN---------EIKLTAKLQHR 498
+++F +++ LGEG +G V + + +E F EIK+ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE 69
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLH 558
N++ + Y+ + + + L +L I + + LH
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH 129
Query: 559 QYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDEL--------QSNTKRIVGTY 610
+ VIHRDLKPSN+L++SN K+ DFGLAR+ QS V T
Sbjct: 130 GSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATR 186
Query: 611 GYMSPEYAI-HGFFSIKSDVFSFGVLLLE 638
Y +PE + +S DV+S G +L E
Sbjct: 187 WYRAPEVMLTSAKYSRAMDVWSCGCILAE 215
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 467 LGEGGFGPVYKSG--------------QGLEEFKN-EIKLTAKLQHRNLVRLLGCCVEQG 511
+G G FG VY++ QG + FKN E+++ KL H N+VRL G
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 512 ENV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
E L+ +Y+P + + K+ L ++ + + + + L Y+H +
Sbjct: 87 EKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG--- 142
Query: 565 VIHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF- 622
+ HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSXICSRY-YRAPELIFGATD 199
Query: 623 FSIKSDVFSFGVLLLETL 640
++ DV+S G +L E L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 32/198 (16%)
Query: 467 LGEGGFGPVYKSG--------------QGLEEFKN-EIKLTAKLQHRNLVRLLGCCVEQG 511
+G G FG VY++ QG + FKN E+++ KL H N+VRL G
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSG 86
Query: 512 ENV------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
E L+ +Y+P + + K+ L ++ + + + + L Y+H +
Sbjct: 87 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLAYIHSFG--- 142
Query: 565 VIHRDLKPSNILLDSNM-IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF- 622
+ HRD+KP N+LLD + + K+ DFG A+ E N I Y Y +PE
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRY-YRAPELIFGATD 199
Query: 623 FSIKSDVFSFGVLLLETL 640
++ DV+S G +L E L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 46/218 (21%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVY-----KSGQ--GLEEFKNEIKL-------------- 491
+ +F + LG+G FG V+ K+ Q ++ K ++ L
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 492 -TAKLQHRNLVRLLGCCVEQGENVL-IYEYLPNKSLDSFL-----FDTTKEGLLGWGARI 544
+ +H L + C + EN+ + EYL L + FD ++ + A I
Sbjct: 71 LSLAWEHPFLTHMF-CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF--YAAEI 127
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR--MFGGDELQSN 602
+ GL +LH +++RDLK NILLD + KI+DFG+ + M G +
Sbjct: 128 IL------GLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG----DAK 174
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T GT Y++PE + ++ D +SFGVLL E L
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 212
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KSQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DFGL R DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 16/161 (9%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ L + H+N++ LL +E+ ++V YL + +D+ L + L
Sbjct: 73 ELVLMKXVNHKNIISLLNVFTPQKTLEEFQDV----YLVMELMDANLCQVIQMELDHERM 128
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+ + + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 129 SYLLYQMLC-GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM-- 182
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 487 NEIKLTAKLQHRNLVRL---LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
E+K+ +H N++ + L V GE +Y L D + + L R
Sbjct: 103 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 162
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQS 601
+ + + +GL Y+H +VIHRDLKPSN+L++ N KI DFG+AR E Q
Sbjct: 163 YFLYQ-LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 602 NTKRIVGTYGYMSPE--YAIHGFFSIKSDVFSFGVLLLETLSSKR 644
V T Y +PE ++H ++ D++S G + E L+ ++
Sbjct: 219 FMTEYVATRWYRAPELMLSLHE-YTQAIDLWSVGCIFGEMLARRQ 262
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 99 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 155
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 216 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
IA GL +L +I+RDLK N++LDS KI+DFG+ + D + TK GT
Sbjct: 130 IAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV--TTKXFCGT 184
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
Y++PE + + D ++FGVLL E L+ +
Sbjct: 185 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQ 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 487 NEIKLTAKLQHRNLVRLL-----GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
E++L L+H N++ LL +E V YL + + L + K L
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKSQALSDE 131
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
++ + +GL Y+H +IHRDLKPSN+ ++ + +I DFGLAR DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMT 186
Query: 602 NTKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSK 643
V T Y +PE ++ ++ D++S G ++ E L K
Sbjct: 187 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI D+GLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 36/214 (16%)
Query: 456 AATNNFGVENK-------LGEGGFGPVYK----------------------SGQGLEEFK 486
A+T ++ ++ + +GEG FG V++ S E+F
Sbjct: 2 ASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 61
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRI 546
E + H ++V+L+G E +I E L SFL ++ L + I
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILY 118
Query: 547 IEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRI 606
++ L YL R +HRD+ N+L+ SN K+ DFGL+R + D +
Sbjct: 119 AYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKG 174
Query: 607 VGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
+M+PE F+ SDV+ FGV + E L
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 208
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 99 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 155
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 216 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G + + +I E L SFL ++ L + I ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 113/277 (40%), Gaps = 49/277 (17%)
Query: 467 LGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVE 509
+G+G FG VY + L+ FK E+ + +H N+V +G C+
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 510 QGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRD 569
+I ++L S + D + +L +I + I +G+ YLH ++H+D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKD 155
Query: 570 LKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGY-----------MSPEYA 618
LK N+ D+ + I+DFGL + G + ++ G+ +SP+
Sbjct: 156 LKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTE 214
Query: 619 IHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWNLWKDDRSWELMDPKL 677
FS SDVF+ G + E + + F T + +W+ M P L
Sbjct: 215 EDKLPFSKHSDVFALGTIWYELHAREWP---FKTQPAEAI-----IWQMGTG---MKPNL 263
Query: 678 QCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+ + K ++ L C +RPT ++++ ML
Sbjct: 264 ---SQIGMGKEISDILLFCWAFEQEERPTFTKLMDML 297
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G + + +I E L SFL ++ L + I ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 131
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G E +I E L SFL ++ L + I ++ L YL R
Sbjct: 106 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 159
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 218
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 219 SASDVWMFGVCMWEIL 234
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 487 NEIKLTAKLQHRNLVRL---LGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGAR 543
E+K+ +H N++ + L V GE +Y L D + + L R
Sbjct: 102 RELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVR 161
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQS 601
+ + + +GL Y+H +VIHRDLKPSN+L++ N KI DFG+AR E Q
Sbjct: 162 YFLYQ-LLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 602 NTKRIVGTYGYMSPE--YAIHGFFSIKSDVFSFGVLLLETLSSKR 644
V T Y +PE ++H ++ D++S G + E L+ ++
Sbjct: 218 FMTEYVATRWYRAPELMLSLHE-YTQAIDLWSVGCIFGEMLARRQ 261
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G + + +I E L SFL ++ L + I ++ L YL R
Sbjct: 83 GV-ITENPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 136
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 195
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 196 SASDVWMFGVCMWEIL 211
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G E +I E L SFL ++ L + I ++ L YL R
Sbjct: 75 GVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLILYAYQLSTALAYLESK---R 128
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 187
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 188 SASDVWMFGVCMWEIL 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 36/215 (16%)
Query: 455 SAATNNFGVENK-------LGEGGFGPVYK----------------------SGQGLEEF 485
S +T ++ ++ + +GEG FG V++ S E+F
Sbjct: 2 SGSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 61
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
E + H ++V+L+G E +I E L SFL ++ L + I
Sbjct: 62 LQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFL--QVRKYSLDLASLIL 118
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKR 605
++ L YL R +HRD+ N+L+ SN K+ DFGL+R + D +
Sbjct: 119 YAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASK 174
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
+M+PE F+ SDV+ FGV + E L
Sbjct: 175 GKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 209
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 18/188 (9%)
Query: 458 TNNFGV----ENKLGEGGFGPVY-KSGQGLEE-FKNEIKLTAKLQHRNLVRLLGCCVEQG 511
+ NFGV +KL + Y + G ++E + EI L+H N+VR +
Sbjct: 30 SGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPT 89
Query: 512 ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
+I EY L + + G + + G+ Y H +++ HRDLK
Sbjct: 90 HLAIIMEYASGGELYERICNA---GRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLK 143
Query: 572 PSNILLDSNMIP--KISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIK-SD 628
N LLD + P KI DFG ++ L S K VGT Y++PE + + K +D
Sbjct: 144 LENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIAD 200
Query: 629 VFSFGVLL 636
V+S GV L
Sbjct: 201 VWSCGVTL 208
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 13/164 (7%)
Query: 477 KSGQGLEE-FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE 535
+ G+ ++E K EI L+H N+VR + ++ EY L + +
Sbjct: 53 ERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--- 109
Query: 536 GLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP--KISDFGLARM 593
G + + G+ Y H ++V HRDLK N LLD + P KI+DFG ++
Sbjct: 110 GRFSEDEARFFFQQLISGVSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSK- 165
Query: 594 FGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIK-SDVFSFGVLL 636
L S K VGT Y++PE + + K +DV+S GV L
Sbjct: 166 --ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 95/221 (42%), Gaps = 51/221 (23%)
Query: 466 KLGEGGFGPVYKS-----------GQGLEEFKN---------EIKLTAKLQ-HRNLVRLL 504
KLG+G +G V+KS + + F+N EI + +L H N+V LL
Sbjct: 16 KLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLL 75
Query: 505 GCCVEQGEN--VLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSR 562
+ L+++Y+ ++ L + +L + ++ + + + YLH
Sbjct: 76 NVLRADNDRDVYLVFDYM-----ETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGG- 129
Query: 563 LRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG-------------------DELQSNT 603
++HRD+KPSNILL++ K++DFGL+R F D+ Q
Sbjct: 130 --LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 604 KRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
V T Y +PE + K D++S G +L E L K
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 62 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 118
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 179 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 60 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 116
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 117 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 176
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 177 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 117
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 178 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ L + H+N++ LL +E+ ++V I L + +L + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 131 ---LLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-- 182
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T +V Y Y +PE + + D++S G ++ E +
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 55 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 111
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 172 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 175 TAGTSFMM--TPEVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 117
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 177
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 178 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 62 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 118
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 178
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 179 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 54 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 110
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 111 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 170
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 171 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 11/178 (6%)
Query: 477 KSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEG 536
+ Q E NE+ + H N+V + + E ++ E+L +L + T
Sbjct: 81 RKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTR--- 137
Query: 537 LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGG 596
+ + + + L YLH VIHRD+K +ILL S+ K+SDFG
Sbjct: 138 -MNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSK 193
Query: 597 DELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
+ K +VGT +M+PE + + D++S G++++E + + +FN L
Sbjct: 194 E--VPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP--YFNEPPL 247
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/231 (22%), Positives = 97/231 (41%), Gaps = 39/231 (16%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVYKS-----------------------GQGLEEF 485
+ L V F + LG+G FG V ++ +EEF
Sbjct: 13 EKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEF 72
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGEN------VLIYEYLPNKSLDSFLFDTTKEGL-- 537
E + H ++ +L+G + ++I ++ + L +FL ++ G
Sbjct: 73 LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENP 131
Query: 538 --LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR-MF 594
L +R + IA G+ YL S IHRDL N +L +M ++DFGL+R ++
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRS 645
GD + + +++ E +++ SDV++FGV + E ++ ++
Sbjct: 189 SGDYYRQGCASKLPV-KWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV L+ C + L+ + P K+L D +L + L
Sbjct: 55 FQNQTH--AKRAYRELV-LMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 111
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
++ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR G
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 171
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 172 TSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 16/158 (10%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E+ L + H+N++ LL +E+ ++V I L + +L + + +
Sbjct: 73 ELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSY-- 130
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR G +
Sbjct: 131 ---LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM-- 182
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
T +V Y Y +PE + + D++S G ++ E +
Sbjct: 183 TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 81/168 (48%), Gaps = 21/168 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEG 536
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 537 LLGW---GARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
++ R+ ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 175 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 487 NEIKLTAKLQHRNLVRLL-----GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
E++L L+H N++ LL +E V YL + + L + K L
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKCQALSDE 123
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
++ + +GL Y+H +IHRDLKPSN+ ++ + +I DFGLAR DE +
Sbjct: 124 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQ--ADEEMT 178
Query: 602 NTKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSK 643
V T Y +PE ++ ++ D++S G ++ E L K
Sbjct: 179 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEG 536
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQ 117
Query: 537 L----LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 175 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMI 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G E +I E L SFL ++ L + I ++ L YL R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ SN K+ DFGL+R + D + +M+PE F+
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 66 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 122
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 123 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 179
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 180 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 46/238 (19%)
Query: 439 ILSMETKTQGKSLASVSAAT--NNFGVENKLGEGGFGPVYKSGQGLEEF----------- 485
I M T G L + T ++ +G+G FG V++ EE
Sbjct: 7 IYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER 66
Query: 486 ----KNEIKLTAKLQHRNLVRLLGCCVEQGEN------VLIYEYLPNKSLDSFL--FDTT 533
+ EI T L+H N++ + + +N L+ +Y + SL +L + T
Sbjct: 67 SWFREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 124
Query: 534 KEGLLGWGARIRIIEGIAQGLLYLHQ-----YSRLRVIHRDLKPSNILLDSNMIPKISDF 588
EG+ I++ A GL +LH + + HRDLK NIL+ N I+D
Sbjct: 125 VEGM------IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 178
Query: 589 GLARMF--GGDELQSNTKRIVGTYGYMSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
GLA D + VGT YM+PE + F S K +D+++ G++ E
Sbjct: 179 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 236
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E K EI L+H N+VR + ++ EY L + + G
Sbjct: 59 ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA---GRFSEDE 115
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP--KISDFGLARMFGGDELQ 600
+ + G+ Y H ++V HRDLK N LLD + P KI DFG ++ L
Sbjct: 116 ARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLH 169
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIK-SDVFSFGVLL 636
S K VGT Y++PE + + K +DV+S GV L
Sbjct: 170 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 206
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + V T Y +PE + + D++S G ++ E + K
Sbjct: 175 TAGTSFMMEPE---VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 46/238 (19%)
Query: 439 ILSMETKTQGKSLASVSAAT--NNFGVENKLGEGGFGPVYKSGQGLEEF----------- 485
I M T G L + T ++ +G+G FG V++ EE
Sbjct: 20 IYDMTTSGSGSGLPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER 79
Query: 486 ----KNEIKLTAKLQHRNLVRLLGCCVEQGEN------VLIYEYLPNKSLDSFL--FDTT 533
+ EI T L+H N++ + + +N L+ +Y + SL +L + T
Sbjct: 80 SWFREAEIYQTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 137
Query: 534 KEGLLGWGARIRIIEGIAQGLLYLHQ-----YSRLRVIHRDLKPSNILLDSNMIPKISDF 588
EG+ I++ A GL +LH + + HRDLK NIL+ N I+D
Sbjct: 138 VEGM------IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 191
Query: 589 GLARMF--GGDELQSNTKRIVGTYGYMSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
GLA D + VGT YM+PE + F S K +D+++ G++ E
Sbjct: 192 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 249
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 44/212 (20%)
Query: 463 VENKLGEGGFGPVYKSGQGLEEF---------------KNEIKLTAKLQHRNLVRLLGCC 507
++ +G+G FG V++ EE + EI T L+H N++ +
Sbjct: 8 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA- 66
Query: 508 VEQGEN------VLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+ +N L+ +Y + SL +L + T EG+ I++ A GL +LH
Sbjct: 67 -DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM------IKLALSTASGLAHLHM 119
Query: 560 -----YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGY 612
+ + HRDLK NIL+ N I+D GLA D + VGT Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 613 MSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
M+PE + F S K +D+++ G++ E
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 211
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 55 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 111
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 112 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 168
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + T +V Y Y +PE + + D++S G ++ E + K
Sbjct: 169 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFGLA+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 44/212 (20%)
Query: 463 VENKLGEGGFGPVYKSGQGLEEF---------------KNEIKLTAKLQHRNLVRLLGCC 507
++ +G+G FG V++ EE + EI T L+H N++ +
Sbjct: 13 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA- 71
Query: 508 VEQGEN------VLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+ +N L+ +Y + SL +L + T EG+ I++ A GL +LH
Sbjct: 72 -DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM------IKLALSTASGLAHLHM 124
Query: 560 -----YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGY 612
+ + HRDLK NIL+ N I+D GLA D + VGT Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 613 MSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
M+PE + F S K +D+++ G++ E
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 216
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 77/163 (47%), Gaps = 18/163 (11%)
Query: 487 NEIKLTAKLQHRNLVRLL-----GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
E++L L+H N++ LL +E V YL + + L + K L
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEV----YLVTTLMGADLNNIVKCQALSDE 131
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
++ + +GL Y+H +IHRDLKPSN+ ++ + +I DFGLAR DE +
Sbjct: 132 HVQFLVYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQ--ADEEMT 186
Query: 602 NTKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSK 643
V T Y +PE ++ ++ D++S G ++ E L K
Sbjct: 187 G---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 175 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 44/212 (20%)
Query: 463 VENKLGEGGFGPVYKSGQGLEEF---------------KNEIKLTAKLQHRNLVRLLGCC 507
++ +G+G FG V++ EE + EI T L+H N++ +
Sbjct: 7 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA- 65
Query: 508 VEQGEN------VLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+ +N L+ +Y + SL +L + T EG+ I++ A GL +LH
Sbjct: 66 -DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM------IKLALSTASGLAHLHM 118
Query: 560 -----YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGY 612
+ + HRDLK NIL+ N I+D GLA D + VGT Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 613 MSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
M+PE + F S K +D+++ G++ E
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 62 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 118
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 119 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 176 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIK 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G + T +V Y Y +PE + + D++S G ++ E +
Sbjct: 175 TAGTSFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEMIK 220
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 44/212 (20%)
Query: 463 VENKLGEGGFGPVYKSGQGLEEF---------------KNEIKLTAKLQHRNLVRLLGCC 507
++ +G+G FG V++ EE + EI T L+H N++ +
Sbjct: 10 LQESIGKGRFGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAA- 68
Query: 508 VEQGEN------VLIYEYLPNKSLDSFL--FDTTKEGLLGWGARIRIIEGIAQGLLYLHQ 559
+ +N L+ +Y + SL +L + T EG+ I++ A GL +LH
Sbjct: 69 -DNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGM------IKLALSTASGLAHLHM 121
Query: 560 -----YSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF--GGDELQSNTKRIVGTYGY 612
+ + HRDLK NIL+ N I+D GLA D + VGT Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 613 MSPEYA-----IHGFFSIK-SDVFSFGVLLLE 638
M+PE + F S K +D+++ G++ E
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWE 213
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I + ++ L R+IHRD+KP NILLD + I+DF +A M E Q T + GT
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR-ETQITT--MAGT 177
Query: 610 YGYMSPEYAIH---GFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAW 661
YM+PE +S D +S GV E L +R ++ S + H +
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
+ + +L L +L +I+RD+K NILLDSN ++DFGL++ F DE + GT
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE-RAYDFCGT 223
Query: 610 YGYMSPEYAIHG--FFSIKSDVFSFGVLLLETLS 641
YM+P+ G D +S GVL+ E L+
Sbjct: 224 IEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 71/131 (54%), Gaps = 15/131 (11%)
Query: 475 VYKSGQGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENV---------LIYEYLPNKSL 525
V Q ++ EIK+ +L H N+V++ G + L Y+ + +
Sbjct: 45 VLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM 104
Query: 526 DSFLFDTTKEG-LLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-NMIP 583
++ L + ++G LL AR+ + + + +GL Y+H + V+HRDLKP+N+ +++ +++
Sbjct: 105 ETDLANVLEQGPLLEEHARLFMYQ-LLRGLKYIHSAN---VLHRDLKPANLFINTEDLVL 160
Query: 584 KISDFGLARMF 594
KI DFGLAR+
Sbjct: 161 KIGDFGLARIM 171
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI D GLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI FGLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI DF LAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
+E NE ++ + LV+L + ++ EY+P + S L +G
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL------RRIGRF 138
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ AQ +L L +I+RDLKP N+L+D K++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----- 193
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
T + GT Y++PE + ++ D ++ GVL+ E
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D K++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 61 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 117
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 174
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
G + V T Y +PE + + D++S G ++ E + K
Sbjct: 175 TAGTSFMMEPE---VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 482 LEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWG 541
+E NE ++ + LV+L + ++ EY+P + S L +G
Sbjct: 85 IEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHL------RRIGRF 138
Query: 542 ARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQS 601
+ AQ +L L +I+RDLKP N+L+D K++DFG A+ G
Sbjct: 139 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG----- 193
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
T + GT Y++PE + ++ D ++ GVL+ E
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D K++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI D GLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 481 GLEEFKNEIKLTAKLQHRNLVRLLGCCV--EQGENVLIYEYLPNKSLDSFLFDTTKEGLL 538
G K EI+L +L+H+N+++L+ E+ + ++ EY + + D+ E
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQE--MLDSVPEKRF 106
Query: 539 GWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDE 598
+ GL YLH ++H+D+KP N+LL + KIS G+A
Sbjct: 107 PVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 599 LQSNTKRIVGTYGYMSPEYA--IHGFFSIKSDVFSFGVLL 636
+ G+ + PE A + F K D++S GV L
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 29/203 (14%)
Query: 459 NNFGVENKLGEGGFGPVYK-----------------SGQGLEEFKNEIKLTAKLQHRNLV 501
+ + LG G FG V++ G K EI + +HRN++
Sbjct: 5 EKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNIL 64
Query: 502 RLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYS 561
L E V+I+E++ LD F T L + + + + L +LH ++
Sbjct: 65 HLHESFESMEELVMIFEFISG--LDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 562 RLRVIHRDLKPSNILLDSNM--IPKISDFGLARMFG-GDELQSNTKRIVGTYGYMSPEYA 618
+ H D++P NI+ + KI +FG AR GD N + + Y +PE
Sbjct: 123 ---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----NFRLLFTAPEYYAPEVH 175
Query: 619 IHGFFSIKSDVFSFGVLLLETLS 641
H S +D++S G L+ LS
Sbjct: 176 QHDVVSTATDMWSLGTLVYVLLS 198
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 486 KNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
K EI L+H N+VR + ++ EY L + + G
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA---GRFSEDEARF 119
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP--KISDFGLARMFGGDELQSNT 603
+ + G+ Y H ++V HRDLK N LLD + P KI DFG ++ L S
Sbjct: 120 FFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQP 173
Query: 604 KRIVGTYGYMSPEYAIHGFFSIK-SDVFSFGVLLLETL 640
K VGT Y++PE + + K +DV+S GV L L
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVML 211
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 48/247 (19%)
Query: 429 SGGASYYFMHILSMETKTQGKSLAS------VSAATNNFGVENKLGEGGFGPVYK----- 477
+ A + H+ S + T AS +S + + ++G GG V++
Sbjct: 20 TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 478 --------------SGQGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLP 521
Q L+ ++NEI KLQ + ++RL + ++ E
Sbjct: 80 KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138
Query: 522 NKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNM 581
N L+S+L K+ + W R + + + + +HQ+ ++H DLKP+N L+ M
Sbjct: 139 NIDLNSWL--KKKKSIDPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGM 192
Query: 582 IPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DV 629
+ K+ DFG+A D VGT YM PE AI S + DV
Sbjct: 193 L-KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDV 250
Query: 630 FSFGVLL 636
+S G +L
Sbjct: 251 WSLGCIL 257
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQG--ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
E ++ KL H+N+V+L E VLI E+ P SL + L + + L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL----DSNMIPKISDFGLARMFGGDELQS 601
++ + G+ +L + ++HR++KP NI+ D + K++DFG AR DE
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--- 170
Query: 602 NTKRIVGTYGYMSPE 616
+ GT Y+ P+
Sbjct: 171 QFVXLYGTEEYLHPD 185
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 86/176 (48%), Gaps = 20/176 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGC-----CVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E++L ++H N++ LL +E+ +V + +L L++ + K L
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV----KCQKLTDDH 126
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
+I I +GL Y+H +IHRDLKPSN+ ++ + KI D GLAR DE+
Sbjct: 127 VQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLAR-HTDDEMTG- 181
Query: 603 TKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
V T Y +PE ++ ++ D++S G ++ E L+ + T F T+ + L
Sbjct: 182 ---YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR--TLFPGTDHIDQL 232
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 129 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 182
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 183 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 214
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 128 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 181
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 182 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 213
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 42/224 (18%)
Query: 446 TQGKSLASVSAATNNFGVENKLGEGGFGPVYK-------------------SGQGLEEFK 486
T+ S+S + + ++G GG V++ Q L+ ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYR 74
Query: 487 NEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI 544
NEI KLQ + ++RL + ++ E N L+S+L K+ + W R
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPW-ERK 130
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 131 SYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKD 186
Query: 605 RIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 187 SQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D +++DFGLA+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 42/224 (18%)
Query: 446 TQGKSLASVSAATNNFGVENKLGEGGFGPVYK-------------------SGQGLEEFK 486
T+ S+S + + ++G GG V++ Q L+ ++
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYR 74
Query: 487 NEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARI 544
NEI KLQ + ++RL + ++ E N L+S+L K+ + W R
Sbjct: 75 NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSIDPW-ERK 130
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTK 604
+ + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 131 SYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD 186
Query: 605 RIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 187 SQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF----LFDTTKEGLLGW 540
F+N+ AK +R LV LL C + L+ + P K+L+ F L + L
Sbjct: 61 FQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 117
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
+ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 118 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC 177
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+ + T +V Y Y +PE + ++ D++S G ++ E +
Sbjct: 178 TNFMM--TPYVVTRY-YRAPEVILGMGYAANVDIWSVGCIMGELVK 220
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQG--ENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR 545
E ++ KL H+N+V+L E VLI E+ P SL + L + + L +
Sbjct: 57 EFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL----DSNMIPKISDFGLARMFGGDELQS 601
++ + G+ +L + ++HR++KP NI+ D + K++DFG AR DE
Sbjct: 117 VLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE--- 170
Query: 602 NTKRIVGTYGYMSPE 616
+ GT Y+ P+
Sbjct: 171 QFVSLYGTEEYLHPD 185
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D K++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
IA L YLH L +++RDLKP NILLDS ++DFGL + E S T GT
Sbjct: 148 IASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGT 202
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETL 640
Y++PE + D + G +L E L
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 135 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 188
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 189 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLAGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDT---- 532
F+N+ AK +R LV L+ C + L+ + P KSL+ F L D
Sbjct: 63 FQNQTH--AKRAYRELV-LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 119
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
+ L ++ + G+ +LH +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 120 VIQMELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 176
Query: 593 MFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
G + V T Y +PE + + D++S G ++ E +
Sbjct: 177 TAGTSFMMVP---FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK 222
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 485 FKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSL----DSFLFDTTKEGLLGW 540
F+N+ AK +R LV LL C + L+ + P K+L D +L + L
Sbjct: 59 FQNQTH--AKRAYRELV-LLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQ 115
Query: 541 GARIRIIEGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFG 595
+ + LLY + +IHRDLKPSNI++ S+ KI DFGLAR
Sbjct: 116 VIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAS 175
Query: 596 GDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLT 655
+ + T +V Y Y +PE + + D++S G ++ E + K S F T+ +
Sbjct: 176 TNFMM--TPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGELV--KGSVIFQGTDHID 230
Query: 656 LLGHAWN 662
WN
Sbjct: 231 ----QWN 233
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 254 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 307
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 308 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 339
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 51/92 (55%), Gaps = 12/92 (13%)
Query: 556 YLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSNTKRIVGTYGY 612
YLH+ +IHRDLKP N+LL S + + KI+DFG +++ G L + + GT Y
Sbjct: 268 YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLM---RTLCGTPTY 321
Query: 613 MSPEYAIH---GFFSIKSDVFSFGVLLLETLS 641
++PE + ++ D +S GV+L LS
Sbjct: 322 LAPEVLVSVGTAGYNRAVDCWSLGVILFICLS 353
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE I ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G + + +I E L SFL ++ L + I ++ L YL R
Sbjct: 78 GV-ITENPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 131
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ + K+ DFGL+R + D + +M+PE F+
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 190
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 191 SASDVWMFGVCMWEIL 206
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLXGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 480 QGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
Q L+ ++NEI KLQ + ++RL + ++ E N L+S+L K+ +
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSI 152
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
W R + + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 153 DPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 207
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 208 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 135 AQIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG-----RTWXLCGTP 189
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 143 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 197
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 223
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 195
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 141 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 195
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 39/194 (20%)
Query: 428 SSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPVY----------- 476
SSG + YF QG + +V +N+ +++ +G G +G VY
Sbjct: 8 SSGRENLYF----------QGAIIKNVKVP-DNYEIKHLIGRGSYGYVYLAYDKNANKNV 56
Query: 477 ---KSGQGLEEFKN------EIKLTAKLQHRNLVRLLGCCVEQGENVLIYE--YLPNKSL 525
K + E+ + EI + +L+ ++RL + E++L ++ Y+ +
Sbjct: 57 AIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLII--PEDLLKFDELYIVLEIA 114
Query: 526 DSFLFDTTKEGLLGWGARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPK 584
DS L K + ++ I+ + G ++H+ +IHRDLKP+N LL+ + K
Sbjct: 115 DSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVK 171
Query: 585 ISDFGLARMFGGDE 598
I DFGLAR D+
Sbjct: 172 ICDFGLARTINSDK 185
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 223
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 149 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTP 203
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 480 QGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
Q L+ ++NEI KLQ + ++RL + ++ E N L+S+L K+ +
Sbjct: 49 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSI 105
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
W R + + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 106 DPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 160
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 161 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 134 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTP 188
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 480 QGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
Q L+ ++NEI KLQ + ++RL + ++ E N L+S+L K+ +
Sbjct: 52 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSI 108
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
W R + + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 109 DPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 163
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 164 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 449 KSLASVSAATNNFGVENKLGEGGFGPVYKSGQGLEEFKNEIKLTAKLQ------------ 496
K + + ++ V +G G FG V + +KL +K +
Sbjct: 65 KKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWE 124
Query: 497 HRNLVRL--------LGCCVEQGENV-LIYEYLPNKSLDSFL--FDTTKEGLLGWGARIR 545
R+++ L C + + + ++ EY+P L + + +D ++ + A +
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEV- 183
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA-RMFGGDELQSNTK 604
+L L + +IHRD+KP N+LLD + K++DFG +M + +T
Sbjct: 184 --------VLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 605 RIVGTYGYMSPEY----AIHGFFSIKSDVFSFGVLLLETL 640
VGT Y+SPE G++ + D +S GV L E L
Sbjct: 236 --VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEML 273
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 96/232 (41%), Gaps = 43/232 (18%)
Query: 439 ILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPVYK--------------------S 478
I +ETK G S F +E +G G F VYK +
Sbjct: 11 IEELETKAVG---XSNDGRFLKFDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLT 65
Query: 479 GQGLEEFKNEIKLTAKLQHRNLVRLLGC--CVEQGEN--VLIYEYLPNKSLDSFL--FDT 532
+ FK E + LQH N+VR +G+ VL+ E + +L ++L F
Sbjct: 66 KSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKV 125
Query: 533 TKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-NMIPKISDFGLA 591
K +L R I +GL +LH + +IHRDLK NI + KI D GLA
Sbjct: 126 XKIKVLRSWCR-----QILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
Query: 592 RMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+ + S K ++GT + +PE + DV++FG LE +S+
Sbjct: 180 TL----KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+++D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 169 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----ATWTLCGTP 223
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ E
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 480 QGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
Q L+ ++NEI KLQ + ++RL + ++ E N L+S+L K+ +
Sbjct: 48 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSI 104
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
W R + + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 105 DPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 159
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VGT YM PE AI S + DV+S G +L
Sbjct: 160 TTSVVKDSQVGTVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E K EI L+H N+VR + ++ EY L + + G
Sbjct: 60 ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA---GRFSEDE 116
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP--KISDFGLARMFGGDELQ 600
+ + G+ Y H ++V HRDLK N LLD + P KI FG ++ L
Sbjct: 117 ARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLH 170
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIK-SDVFSFGVLL 636
S K VGT Y++PE + + K +DV+S GV L
Sbjct: 171 SQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 29/196 (14%)
Query: 467 LGEGGFGPVYK----------------------SGQGLEEFKNEIKLTAKLQHRNLVRLL 504
+GEG FG V++ S E+F E + H ++V+L+
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 505 GCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLR 564
G E +I E L SFL ++ L + I ++ L YL R
Sbjct: 458 GVITE-NPVWIIMELCTLGELRSFL--QVRKFSLDLASLILYAYQLSTALAYLESK---R 511
Query: 565 VIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFS 624
+HRD+ N+L+ + K+ DFGL+R + D + +M+PE F+
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSR-YMEDSTYYKASKGKLPIKWMAPESINFRRFT 570
Query: 625 IKSDVFSFGVLLLETL 640
SDV+ FGV + E L
Sbjct: 571 SASDVWMFGVCMWEIL 586
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 38/165 (23%)
Query: 453 SVSAATNNFGVENKLGEGGFGPVYKSGQGLEEFKNE-------------IKLTAKLQ--- 496
+V +N F +E+K+GEG F VY + L+ E I++ A+LQ
Sbjct: 15 AVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLT 74
Query: 497 ----HRNLVRLLGCCVEQGENVLIYEYLPNKS----LDSFLFDTTKEGLLGWGARIRIIE 548
N++ + C + V+ YL ++S L+S F +E +L
Sbjct: 75 VAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYML---------- 124
Query: 549 GIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP-KISDFGLAR 592
+ + L +HQ+ ++HRD+KPSN L + + + DFGLA+
Sbjct: 125 NLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 68/157 (43%), Gaps = 12/157 (7%)
Query: 483 EEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGA 542
E K EI L+H N+VR + ++ EY L + + G
Sbjct: 60 ENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNA---GRFSEDE 116
Query: 543 RIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIP--KISDFGLARMFGGDELQ 600
+ + G+ Y H ++V HRDLK N LLD + P KI FG ++ L
Sbjct: 117 ARFFFQQLISGVSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSK---SSVLH 170
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIK-SDVFSFGVLL 636
S K VGT Y++PE + + K +DV+S GV L
Sbjct: 171 SQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTL 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++PE + ++ D ++ GVL+ +
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQ 230
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
EI+L H N++ L V E + YL + + + L + RI I
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD------QRIVIS 132
Query: 548 EGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
Q +Y LH V+HRDL P NILL N I DF LAR D +N
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADAN 189
Query: 603 TKRIVGTYGYMSPEYAIH--GFFSIKSDVFSFGVLLLETLSSK---RSTRFFN 650
V Y +PE + GF + D++S G ++ E + K R + F+N
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 20/173 (11%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRII 547
EI+L H N++ L V E + YL + + + L + RI I
Sbjct: 79 EIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHD------QRIVIS 132
Query: 548 EGIAQGLLY-----LHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSN 602
Q +Y LH V+HRDL P NILL N I DF LAR D +N
Sbjct: 133 PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADAN 189
Query: 603 TKRIVGTYGYMSPEYAIH--GFFSIKSDVFSFGVLLLETLSSK---RSTRFFN 650
V Y +PE + GF + D++S G ++ E + K R + F+N
Sbjct: 190 KTHYVTHRWYRAPELVMQFKGFTKL-VDMWSAGCVMAEMFNRKALFRGSTFYN 241
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 16/169 (9%)
Query: 488 EIKLTAKLQHRNLVRLLGCCVEQGENV--LIYEYLPNKSLDSFLFD-----TTKEGLLGW 540
EI L +L+H N++ L + + L+++Y + F K L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 541 GARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL----DSNMIPKISDFGLARMFGG 596
G ++ I G+ YLH V+HRDLKP+NIL+ KI+D G AR+F
Sbjct: 128 GMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 597 D-ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS-DVFSFGVLLLETLSSK 643
+ ++ +V T+ Y +PE + K+ D+++ G + E L+S+
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 480 QGLEEFKNEIKLTAKLQHRN--LVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGL 537
Q L+ ++NEI KLQ + ++RL + ++ E N L+S+L K+ +
Sbjct: 96 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWL--KKKKSI 152
Query: 538 LGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGD 597
W R + + + + +HQ+ ++H DLKP+N L+ M+ K+ DFG+A D
Sbjct: 153 DPW-ERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVDGML-KLIDFGIANQMQPD 207
Query: 598 ELQSNTKRIVGTYGYMSPEYAIHGFFSIKS------------DVFSFGVLL 636
VG YM PE AI S + DV+S G +L
Sbjct: 208 TTSVVKDSQVGAVNYMPPE-AIKDMSSSRENGKSKSKISPKSDVWSLGCIL 257
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 10/119 (8%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFG-LARMFGGDELQSNTKRIVG 608
+A+ ++ + +L +HRD+KP NIL+D N +++DFG ++ +QS+ VG
Sbjct: 181 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VG 238
Query: 609 TYGYMSPEY-----AIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLLGHAWN 662
T Y+SPE G + + D +S GV + E L + T F+ + + G N
Sbjct: 239 TPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE--TPFYAESLVETYGKIMN 295
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-GLLGWGARIRIIEGIAQGLL 555
H LV L C + + EY+ L +F ++ L AR E I+ L
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 135
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
YLH+ +I+RDLK N+LLDS K++D+G+ + G T GT Y++P
Sbjct: 136 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 190
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E + D ++ GVL+ E ++ +
Sbjct: 191 EILRGEDYGFSVDWWALGVLMFEMMAGR 218
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 466 KLGEGGFGPVYKSGQG------------LEEFK-NEIKLTAKLQHRNLVRLLGCCVEQGE 512
+LG G FG V++ LE F+ E+ A L +V L G V +G
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGA-VREGP 139
Query: 513 NVLIY-EYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
V I+ E L SL + ++G L + + +GL YLH SR R++H D+K
Sbjct: 140 WVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RILHGDVK 193
Query: 572 PSNILLDSN-MIPKISDFGLARMFGGDELQSNT---KRIVGTYGYMSPEYAIHGFFSIKS 627
N+LL S+ + DFG A D L + I GT +M+PE + K
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 628 DVFSFGVLLLETLSSKRS-TRFFN 650
DV+S ++L L+ T+FF
Sbjct: 254 DVWSSCCMMLHMLNGCHPWTQFFR 277
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
Y++P + ++ D ++ GVL+ E
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A+ +L L + IHRD+KP N+LLD + K++DFG M E VGT
Sbjct: 175 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTP 233
Query: 611 GYMSPEY----AIHGFFSIKSDVFSFGVLLLETL 640
Y+SPE G++ + D +S GV L E L
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 267
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFG-LARMFGGDELQSNTKRIVG 608
I + +L + +L +HRD+KP N+LLD N +++DFG +M +QS+ VG
Sbjct: 181 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VG 238
Query: 609 TYGYMSPEY--AIH---GFFSIKSDVFSFGVLLLETL 640
T Y+SPE A+ G + + D +S GV + E L
Sbjct: 239 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 275
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-GLLGWGARIRIIEGIAQGLL 555
H LV L C + + EY+ L +F ++ L AR E I+ L
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 167
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
YLH+ +I+RDLK N+LLDS K++D+G+ + G T GT Y++P
Sbjct: 168 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAP 222
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E + D ++ GVL+ E ++ +
Sbjct: 223 EILRGEDYGFSVDWWALGVLMFEMMAGR 250
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFG-LARMFGGDELQSNTKRIVG 608
I + +L + +L +HRD+KP N+LLD N +++DFG +M +QS+ VG
Sbjct: 197 IGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVA--VG 254
Query: 609 TYGYMSPEY--AIH---GFFSIKSDVFSFGVLLLETL 640
T Y+SPE A+ G + + D +S GV + E L
Sbjct: 255 TPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEML 291
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A+ +L L + IHRD+KP N+LLD + K++DFG M E VGT
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTP 238
Query: 611 GYMSPEY----AIHGFFSIKSDVFSFGVLLLETL 640
Y+SPE G++ + D +S GV L E L
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
A+ +L L + IHRD+KP N+LLD + K++DFG M E VGT
Sbjct: 180 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTC-MKMNKEGMVRCDTAVGTP 238
Query: 611 GYMSPEY----AIHGFFSIKSDVFSFGVLLLETL 640
Y+SPE G++ + D +S GV L E L
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEGLL 538
E+ L +QH N++ LL + P SL +F T + ++
Sbjct: 72 RELLLLKHMQHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIM 119
Query: 539 GWG---ARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
G +I+ ++ + +GL Y+H V+HRDLKP N+ ++ + KI DFGLAR
Sbjct: 120 GLKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-- 174
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSK 643
+ V T Y +PE + ++ D++S G ++ E L+ K
Sbjct: 175 ---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH S V++RDLK N++LD + KI+DFGL + G + + K GT
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 312
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 313 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLF 358
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH S V++RDLK N++LD + KI+DFGL + G + + K GT
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGT 315
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 316 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLF 361
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 33/170 (19%)
Query: 487 NEIKLTAKLQHRNLVRLLGCCVEQGENVLIYEYLPNKSLDSF--------LFDTTKEGLL 538
E+ L +QH N++ LL + P SL +F T + ++
Sbjct: 90 RELLLLKHMQHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIM 137
Query: 539 GWG---ARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF 594
G +I+ ++ + +GL Y+H V+HRDLKP N+ ++ + KI DFGLAR
Sbjct: 138 GMEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-- 192
Query: 595 GGDELQSNTKRIVGTYGYMSPEYAIHGF-FSIKSDVFSFGVLLLETLSSK 643
+ V T Y +PE + ++ D++S G ++ E L+ K
Sbjct: 193 ---HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-------------NMIPKISDFGL 590
I ++ IA G+ +LH L++IHRDLKP NIL+ + N+ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 591 ARMF--GGDELQSNTKRIVGTYGYMSPEY---AIHGFFSIKSDVFSFGVLLLETLS 641
+ G + N GT G+ +PE + + D+FS G + LS
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 466 KLGEGGFGPVYKSGQG------------LEEFK-NEIKLTAKLQHRNLVRLLGCCVEQGE 512
+LG G FG V++ LE F+ E+ A L +V L G V +G
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGA-VREGP 158
Query: 513 NVLIY-EYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRDLK 571
V I+ E L SL + ++G L + + +GL YLH SR R++H D+K
Sbjct: 159 WVNIFMELLEGGSLGQLV---KEQGCLPEDRALYYLGQALEGLEYLH--SR-RILHGDVK 212
Query: 572 PSNILLDSN-MIPKISDFGLARMFGGDELQSNT---KRIVGTYGYMSPEYAIHGFFSIKS 627
N+LL S+ + DFG A D L + I GT +M+PE + K
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 628 DVFSFGVLLLETLSSKRS-TRFFN 650
DV+S ++L L+ T+FF
Sbjct: 273 DVWSSCCMMLHMLNGCHPWTQFFR 296
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 21/116 (18%)
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-------------NMIPKISDFGL 590
I ++ IA G+ +LH L++IHRDLKP NIL+ + N+ ISDFGL
Sbjct: 136 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
Query: 591 ARMF--GGDELQSNTKRIVGTYGYMSPEY---AIHGFFSIKSDVFSFGVLLLETLS 641
+ G + N GT G+ +PE + + D+FS G + LS
Sbjct: 193 CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILS 248
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-GLLGWGARIRIIEGIAQGLL 555
H LV L C + + EY+ L +F ++ L AR E I+ L
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 120
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
YLH+ +I+RDLK N+LLDS K++D+G+ + G T GT Y++P
Sbjct: 121 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 175
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E + D ++ GVL+ E ++ +
Sbjct: 176 EILRGEDYGFSVDWWALGVLMFEMMAGR 203
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKE-GLLGWGARIRIIEGIAQGLL 555
H LV L C + + EY+ L +F ++ L AR E I+ L
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDL---MFHMQRQRKLPEEHARFYSAE-ISLALN 124
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSP 615
YLH+ +I+RDLK N+LLDS K++D+G+ + G T GT Y++P
Sbjct: 125 YLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 179
Query: 616 EYAIHGFFSIKSDVFSFGVLLLETLSSK 643
E + D ++ GVL+ E ++ +
Sbjct: 180 EILRGEDYGFSVDWWALGVLMFEMMAGR 207
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 554 LLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMF---GGDELQSNTKRIVGTY 610
LL L ++H D+KP+NI L K+ DFGL G E+Q R
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----- 221
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLET 639
YM+PE + G + +DVFS G+ +LE
Sbjct: 222 -YMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH S V++RDLK N++LD + KI+DFGL + G + + K GT
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 173
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLF 219
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH S V++RDLK N++LD + KI+DFGL + G + + K GT
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 174
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 175 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLF 220
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 551 AQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTY 610
AQ +L L +I+RDLKP N+L+D +++DFG A+ G T + GT
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWXLCGTP 202
Query: 611 GYMSPEYAIHGFFSIKSDVFSFGVLLLE 638
++PE + ++ D ++ GVL+ E
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 497 HRNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLY 556
H N+V+L +Q L+ E L L + K+ I+ + + +
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERI---KKKKHFSETEASYIMRKLVSAVSH 121
Query: 557 LHQYSRLRVIHRDLKPSNILL---DSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYM 613
+H V+HRDLKP N+L + N+ KI DFG AR+ D K T Y
Sbjct: 122 MHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--NQPLKTPCFTLHYA 176
Query: 614 SPEYAIHGFFSIKSDVFSFGVLLLETLSSK 643
+PE + D++S GV+L LS +
Sbjct: 177 APELLNQNGYDESCDLWSLGVILYTMLSGQ 206
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 18/88 (20%)
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-------------NMIPKISDFGL 590
I ++ IA G+ +LH L++IHRDLKP NIL+ + N+ ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 591 ARMF--GGDELQSNTKRIVGTYGYMSPE 616
+ G ++N GT G+ +PE
Sbjct: 175 CKKLDSGQSSFRTNLNNPSGTSGWRAPE 202
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 6/108 (5%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH S V++RDLK N++LD + KI+DFGL + G + + K GT
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGT 172
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 173 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHEKLF 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 467 LGEGGFGPVYKSGQGLEEFKNEIKL----------------TAKLQ------------HR 498
LG+GGFG V+ + + + IK+ T L+ H
Sbjct: 39 LGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHP 98
Query: 499 NLVRLLGCCVEQGENVLIYEY-LPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
++RLL Q +L+ E LP + L ++ T++G LG G + + +
Sbjct: 99 GVIRLLDWFETQEGFMLVLERPLPAQDLFDYI---TEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 558 HQYSRLRVIHRDLKPSNILLD-SNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPE 616
H V+HRD+K NIL+D K+ DFG + DE ++ GT Y PE
Sbjct: 156 HSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALL-HDEPYTDFD---GTRVYSPPE 208
Query: 617 Y-AIHGFFSIKSDVFSFGVLLLETL 640
+ + H + ++ + V+S G+LL + +
Sbjct: 209 WISRHQYHALPATVWSLGILLYDMV 233
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 542 ARIRIIEG-IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQ 600
AR R I L++LH +I+RDLK N+LLD K++DFG+ + G
Sbjct: 124 ARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNG 178
Query: 601 SNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSL 654
T GT Y++PE + D ++ GVLL E L N + L
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL 232
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 18/88 (20%)
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-------------NMIPKISDFGL 590
I ++ IA G+ +LH L++IHRDLKP NIL+ + N+ ISDFGL
Sbjct: 118 ISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
Query: 591 ARMF--GGDELQSNTKRIVGTYGYMSPE 616
+ G + N GT G+ +PE
Sbjct: 175 CKKLDSGQXXFRXNLNNPSGTSGWRAPE 202
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 172 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 567 HRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGFFSIK 626
HRD+KP NIL+ ++ + DFG+A DE + VGT Y +PE + +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASAT-TDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 627 SDVFSFGVLLLETLS 641
+D+++ +L E L+
Sbjct: 216 ADIYALTCVLYECLT 230
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 172
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 173 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 208
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 187
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 188 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 223
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 166 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 217
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 253
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 177
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 178 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 213
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 179
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 180 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 178
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 179 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 214
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 55/110 (50%), Gaps = 18/110 (16%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-NMIP--KISDFGLAR--MFGGDELQ 600
+++ +A L +LH + HRDLKP NIL + N + KI DFGL GD
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 601 SNTKRIV---GTYGYMSPEYAIHGF------FSIKSDVFSFGVLLLETLS 641
+T ++ G+ YM+PE + F + + D++S GV+L LS
Sbjct: 173 ISTPELLTPCGSAEYMAPE-VVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 172 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 223
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 224 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 259
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 173
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 174 NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 209
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Query: 544 IRIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILL-----DSNMIPKISDFGLARMFG-GD 597
I +++ GL +LH L ++HRDLKP NIL+ + ISDFGL + G
Sbjct: 121 ITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 598 ELQSNTKRIVGTYGYMSPE 616
S + GT G+++PE
Sbjct: 178 HSFSRRSGVPGTEGWIAPE 196
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 46/200 (23%)
Query: 480 QGLEEFKNEIKLTAKLQHRNLVRLLGCCVEQGENVLIYE-----YLPNKSLDSFLFDTT- 533
+ +E K E++L KL H N+ RL ++ L+ E +L +K L+ F+ D+T
Sbjct: 70 KDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK-LNVFIDDSTG 128
Query: 534 ------------------KEGL----------LGWGARIRIIEGIAQGLL-YLHQYSRLR 564
+E + L + R ++I I + + LH
Sbjct: 129 KCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG 188
Query: 565 VIHRDLKPSNILLDSN--MIPKISDFGLARMF----GGDELQSNTKRIVGTYGYMSPEY- 617
+ HRD+KP N L +N K+ DFGL++ F G+ TK GT +++PE
Sbjct: 189 ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK--AGTPYFVAPEVL 246
Query: 618 -AIHGFFSIKSDVFSFGVLL 636
+ + K D +S GVLL
Sbjct: 247 NTTNESYGPKCDAWSAGVLL 266
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 119 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 173
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 174 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 219
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 214
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNIL-LDSNMIP---KISDFGLARMFGGDELQSNTKR 605
I + + YLH V+HRDLKPSNIL +D + P +I DFG A+ + T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP- 180
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T +++PE + D++S GVLL L+
Sbjct: 181 -CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLT 215
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 464 ENKLGEGGFGPVYKSGQG------------LEEFK-NEIKLTAKLQHRNLVRLLGCCVEQ 510
+ +LG G FG V++ LE F+ E+ A L +V L G V +
Sbjct: 77 QPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGA-VRE 135
Query: 511 GENVLIY-EYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRD 569
G V I+ E L SL + + G L + + +GL YLH R++H D
Sbjct: 136 GPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGD 189
Query: 570 LKPSNILLDSN-MIPKISDFGLARMFGGDELQSNT---KRIVGTYGYMSPEYAIHGFFSI 625
+K N+LL S+ + DFG A D L + I GT +M+PE +
Sbjct: 190 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 249
Query: 626 KSDVFSFGVLLLETLSSKRS-TRFFN 650
K D++S ++L L+ T++F
Sbjct: 250 KVDIWSSCCMMLHMLNGCHPWTQYFR 275
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 214
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 41/194 (21%)
Query: 428 SSGGASYYFMHILSMETKTQGKSLASVSAATNNFGVENKLGEGGFGPVY----------- 476
SSG + YF I ++ +N+ +++ +G G +G VY
Sbjct: 8 SSGRENLYFQGIKNVH-------------VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNV 54
Query: 477 ---KSGQGLEEFKN------EIKLTAKLQHRNLVRLLGCCVEQGENVLIYE--YLPNKSL 525
K + E+ + EI + +L+ ++RL + +++L ++ Y+ +
Sbjct: 55 AIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLII--PDDLLKFDELYIVLEIA 112
Query: 526 DSFLFDTTKEGLLGWGARIR-IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPK 584
DS L K + I+ I+ + G ++H+ +IHRDLKP+N LL+ + K
Sbjct: 113 DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVK 169
Query: 585 ISDFGLARMFGGDE 598
+ DFGLAR ++
Sbjct: 170 VCDFGLARTINSEK 183
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 498 RNLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYL 557
+N++ L+ + L++E L S+ L K+ R++ +A L +L
Sbjct: 71 KNILELIEFFEDDTRFYLVFEKLQGGSI---LAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 558 HQYSRLRVIHRDLKPSNILLDS--NMIP-KISDFGLARMFGGDELQSNTKRIV------- 607
H + HRDLKP NIL +S + P KI DF L G +L ++ I
Sbjct: 128 HTKG---IAHRDLKPENILCESPEKVSPVKICDFDLG---SGMKLNNSCTPITTPELTTP 181
Query: 608 -GTYGYMSPEYA-----IHGFFSIKSDVFSFGVLLLETLS 641
G+ YM+PE F+ + D++S GV+L LS
Sbjct: 182 CGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLS 221
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKXFCGT 168
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 214
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 13/96 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 171
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVLL 636
Y Y++PE + D++S GV++
Sbjct: 172 NSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 207
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 117 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 171
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 172 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLARMFGGDELQSNTKRIVGT 609
I L YLH V++RD+K N++LD + KI+DFGL + D + K GT
Sbjct: 114 IVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD--GATMKTFCGT 168
Query: 610 YGYMSPEYAIHGFFSIKSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
Y++PE + D + GV++ E + + F+N + L
Sbjct: 169 PEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP--FYNQDHERLF 214
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 93/199 (46%), Gaps = 29/199 (14%)
Query: 467 LGEGGFGPVYKSG----------QGLEE--FKN-EIKLTAKLQHRNLVRLLGCCVEQGEN 513
+G G FG V+++ + L++ FKN E+++ ++H N+V L G+
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDK 107
Query: 514 V------LIYEYLPNKSLD-SFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVI 566
L+ EY+P S + K+ + ++ + + + + L Y+H + +
Sbjct: 108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ-LLRSLAYIHS---IGIC 163
Query: 567 HRDLKPSNILLD-SNMIPKISDFGLARMFGGDELQSNTKRIVGTYGYMSPEYAIHGF-FS 624
HRD+KP N+LLD + + K+ DFG A++ E N I Y Y +PE ++
Sbjct: 164 HRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE--PNVSXICSRY-YRAPELIFGATNYT 220
Query: 625 IKSDVFSFGVLLLETLSSK 643
D++S G ++ E + +
Sbjct: 221 TNIDIWSTGCVMAELMQGQ 239
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL-LDSNMIP---KISDFGLARMFGGDELQS 601
++ I + + YLH V+HRDLKPSNIL +D + P +I DFG A+ +
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T T +++PE + D++S G+LL L+
Sbjct: 183 MTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 550 IAQGLLYLHQYSRLRVIHRDLKPSNIL-LDSNMIP---KISDFGLARMFGGDELQSNTKR 605
I + + YLH V+HRDLKPSNIL +D + P +I DFG A+ + T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP- 180
Query: 606 IVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T +++PE + D++S GVLL L+
Sbjct: 181 -CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT 215
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 464 ENKLGEGGFGPVYKSGQG------------LEEFK-NEIKLTAKLQHRNLVRLLGCCVEQ 510
+ ++G G FG V++ LE F+ E+ A L +V L G V +
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGA-VRE 121
Query: 511 GENVLIY-EYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRD 569
G V I+ E L SL + + G L + + +GL YLH R++H D
Sbjct: 122 GPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGD 175
Query: 570 LKPSNILLDSN-MIPKISDFGLARMFGGDELQSNT---KRIVGTYGYMSPEYAIHGFFSI 625
+K N+LL S+ + DFG A D L + I GT +M+PE +
Sbjct: 176 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 235
Query: 626 KSDVFSFGVLLLETLSSKRS-TRFFN 650
K D++S ++L L+ T++F
Sbjct: 236 KVDIWSSCCMMLHMLNGCHPWTQYFR 261
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 9/100 (9%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNIL-LDSNMIP---KISDFGLARMFGGDELQS 601
++ I + + YLH V+HRDLKPSNIL +D + P +I DFG A+ +
Sbjct: 126 VLHTIGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 602 NTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
T T +++PE + D++S G+LL L+
Sbjct: 183 MTP--CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLA 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 114/297 (38%), Gaps = 70/297 (23%)
Query: 463 VENKLGEGGFGPVYKS---GQGLE----------EFKN-----EIKLTAKLQ-HRNLVRL 503
V L EGGF VY++ G G E E KN E+ KL H N+V+
Sbjct: 32 VRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQF 91
Query: 504 LGCC--------VEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLL 555
Q E +L+ E L L FL G L ++I + +
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 556 YLHQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLA---------------RMFGGDELQ 600
++H+ + +IHRDLK N+LL + K+ DFG A R +E+
Sbjct: 151 HMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEIT 209
Query: 601 SNTKRIVGTYGYMSPEYA-IHGFFSI--KSDVFSFGVLLLETLSSKRSTRFFNTNSLTLL 657
NT T Y +PE ++ F I K D+++ G +L L R F + L ++
Sbjct: 210 RNT-----TPMYRTPEIIDLYSNFPIGEKQDIWALGCILY--LLCFRQHPFEDGAKLRIV 262
Query: 658 GHAWNLWKDDRSWELMDPKLQCEASYPIVKRYINVALLCVQENAADRPTMSEVISML 714
+++ D Y + I L Q N +R +++EV+ L
Sbjct: 263 NGKYSIPPHD-------------TQYTVFHSLIRAML---QVNPEERLSIAEVVHQL 303
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 26/206 (12%)
Query: 464 ENKLGEGGFGPVYKSGQG------------LEEFK-NEIKLTAKLQHRNLVRLLGCCVEQ 510
+ ++G G FG V++ LE F+ E+ A L +V L G V +
Sbjct: 79 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGA-VRE 137
Query: 511 GENVLIY-EYLPNKSLDSFLFDTTKEGLLGWGARIRIIEGIAQGLLYLHQYSRLRVIHRD 569
G V I+ E L SL + + G L + + +GL YLH R++H D
Sbjct: 138 GPWVNIFMELLEGGSLGQLI---KQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGD 191
Query: 570 LKPSNILLDSN-MIPKISDFGLARMFGGDELQSNT---KRIVGTYGYMSPEYAIHGFFSI 625
+K N+LL S+ + DFG A D L + I GT +M+PE +
Sbjct: 192 VKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDA 251
Query: 626 KSDVFSFGVLLLETLSSKRS-TRFFN 650
K D++S ++L L+ T++F
Sbjct: 252 KVDIWSSCCMMLHMLNGCHPWTQYFR 277
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I + I + + YLH + + HRD+KP N+L S N I K++DFG A+ E S+
Sbjct: 166 IXKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-----ETTSH 217
Query: 603 TKRIVGTYG--YMSPEYAIHGFFSIKSDVFSFGVL 635
Y Y++PE + D +S GV+
Sbjct: 218 NSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVI 252
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I+ I + +LH ++ + HRD+KP N+L S + + K++DFG A+ + LQ+
Sbjct: 114 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 170
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
T Y++PE + D++S GV++
Sbjct: 171 CY----TPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDELQSN 602
I+ I + +LH ++ + HRD+KP N+L S + + K++DFG A+ + LQ+
Sbjct: 133 IMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP 189
Query: 603 TKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLL 636
T Y++PE + D++S GV++
Sbjct: 190 CY----TPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 18/110 (16%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS-NMIP--KISDFGLAR--MFGGDELQ 600
+++ +A L +LH + HRDLKP NIL + N + KI DF L GD
Sbjct: 116 VVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 601 SNTKRIV---GTYGYMSPEYAIHGF------FSIKSDVFSFGVLLLETLS 641
+T ++ G+ YM+PE + F + + D++S GV+L LS
Sbjct: 173 ISTPELLTPCGSAEYMAPE-VVEAFSEEASIYDKRCDLWSLGVILYILLS 221
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 459 NNFGVENKLGEGGFGPVYKSGQGLEE-----------FKN---------EIKLTAKLQHR 498
+ + + + +G G +G V ++ LE+ F++ EI + +L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 499 NLVRLLGCCVEQGENVLIYEYLPNKSLDSFLFDTTKEGLLGWGARIR-IIEGIAQGLLYL 557
++V++L + + Y+ + DS + + I+ ++ + G+ Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 558 HQYSRLRVIHRDLKPSNILLDSNMIPKISDFGLAR 592
H ++HRDLKP+N L++ + K+ DFGLAR
Sbjct: 173 HSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLD-----SNMIP-KISDFGLARMFGGDE 598
+I + + GL Y+H+ R +IH D+KP N+L++ N+I KI+D G A + DE
Sbjct: 135 QISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DE 190
Query: 599 LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+N+ + T Y SPE + + +D++S L+ E ++
Sbjct: 191 HYTNS---IQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSN 580
+II+ + QGL YLH ++ R+IH D+KP NILL N
Sbjct: 150 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN 183
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLD-----SNMIP-KISDFGLARMFGGDE 598
+I + + GL Y+H+ R +IH D+KP N+L++ N+I KI+D G A + DE
Sbjct: 135 QISKQLLLGLDYMHR--RCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWY--DE 190
Query: 599 LQSNTKRIVGTYGYMSPEYAIHGFFSIKSDVFSFGVLLLETLS 641
+N+ + T Y SPE + + +D++S L+ E ++
Sbjct: 191 HYTNS---IQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 230
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 545 RIIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDSN 580
+II+ + QGL YLH ++ R+IH D+KP NILL N
Sbjct: 134 KIIQQVLQGLDYLH--TKCRIIHTDIKPENILLSVN 167
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 546 IIEGIAQGLLYLHQYSRLRVIHRDLKPSNILLDS---NMIPKISDFGLARMFGGDE 598
I++ I + + YLH + + HRD+KP N+L S N I K++DFG A+ G++
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK 174
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,975,448
Number of Sequences: 62578
Number of extensions: 1001664
Number of successful extensions: 4834
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 881
Number of HSP's successfully gapped in prelim test: 231
Number of HSP's that attempted gapping in prelim test: 2385
Number of HSP's gapped (non-prelim): 1253
length of query: 754
length of database: 14,973,337
effective HSP length: 106
effective length of query: 648
effective length of database: 8,340,069
effective search space: 5404364712
effective search space used: 5404364712
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)