BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036421
(422 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q00218|AROG_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2
Length = 507
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/418 (80%), Positives = 377/418 (90%), Gaps = 8/418 (1%)
Query: 8 SSLLSSKSLMHHRRSLLPSSGRSVTALKPISAVHSTDP---ANTKTVSTKWTPDSWRNKK 64
SS L++KS + +R + R + P+ AVHSTDP + + S KW+ +SW++KK
Sbjct: 7 SSPLTTKSFLPYRHA-----PRRPISFSPVFAVHSTDPKKSTQSASASVKWSLESWKSKK 61
Query: 65 ALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFK 124
ALQ+P+YP++ ++DSVL TLSSFPPIVFAGE+RKLED+LGQAA+G AF+L GGDCAESFK
Sbjct: 62 ALQLPDYPDQKDVDSVLQTLSSFPPIVFAGEARKLEDKLGQAAMGQAFMLQGGDCAESFK 121
Query: 125 EFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRG 184
EFNANNIRDTFRVLLQM VVLMFGGQ+PVIKVGRMAGQFAKPRSDPFEEK+GVKLPSYRG
Sbjct: 122 EFNANNIRDTFRVLLQMGVVLMFGGQLPVIKVGRMAGQFAKPRSDPFEEKDGVKLPSYRG 181
Query: 185 DNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSE 244
DN+NGDAFD +SRIPDPHRM+RAY+QSVATLNLLRAFATGGYAAMQRV+ WNLDFT HSE
Sbjct: 182 DNINGDAFDEKSRIPDPHRMVRAYTQSVATLNLLRAFATGGYAAMQRVSQWNLDFTQHSE 241
Query: 245 QGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGL 304
QGDRY+ELANRVDEA+GFM AAGLT+ HPIMT+TEFWTSHECLLLPYEQALTREDSTSGL
Sbjct: 242 QGDRYRELANRVDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGL 301
Query: 305 YYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPG 364
YYDCSAHM+WVGERTRQLDGAHVEFLRG+ANPLGIKVS+KM P ELV+LI ILNP+NKPG
Sbjct: 302 YYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPG 361
Query: 365 RITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAIR 422
RITVIVRMGAENMRVKLP+LIRAVR AGQIVTWVSDPMHGNTI AP GLKTRSFDAIR
Sbjct: 362 RITVIVRMGAENMRVKLPNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIR 419
>sp|P37215|AROF_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 511
Score = 692 bits (1785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/405 (80%), Positives = 362/405 (89%), Gaps = 6/405 (1%)
Query: 20 RRSLLPSS--GRSVTALKPISAVHSTDPANTKTVSTKWTPDSWRNKKALQIPEYPNKAEL 77
R SL P++ GR PISAVH+ +P+ T KW+ DSW+ KKALQ+PEYP++ EL
Sbjct: 29 RFSLFPTTQHGRR----HPISAVHAAEPSKTAVKQGKWSLDSWKTKKALQLPEYPDEKEL 84
Query: 78 DSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRV 137
+SVL TL PP+VFAGE+R LE++LG+AALG AFLL GGDCAESFKEFNANNIRDTFR+
Sbjct: 85 ESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRI 144
Query: 138 LLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSR 197
LLQMSVVLMFGGQ+PVIKVGRMAGQFAKPRSDPFEE NGVKLPSY+GDN+NGD FD +SR
Sbjct: 145 LLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPFEEINGVKLPSYKGDNINGDTFDEKSR 204
Query: 198 IPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVD 257
IPDPHR+IRAY QS ATLNLLRAFATGGYAAMQRV WNLDF ++SEQGDRYQELA+RVD
Sbjct: 205 IPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVENSEQGDRYQELAHRVD 264
Query: 258 EAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGE 317
EA+GFMAAAGLT +HPIM++T+FWTSHECLLLPYEQALTREDSTSGL+YDCSAHMVWVGE
Sbjct: 265 EALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324
Query: 318 RTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENM 377
RTRQLDGAHVEFLRGVANPLGIKVS KMDPKEL++LI ILNP NKPGRITVIVRMGAENM
Sbjct: 325 RTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRITVIVRMGAENM 384
Query: 378 RVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAIR 422
RVKL HL+RAVR AGQIVTWV DPMHGNTIKAP GLKTR+FD+I+
Sbjct: 385 RVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQ 429
>sp|P21357|AROF_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Solanum tuberosum GN=SHKA PE=1 SV=2
Length = 538
Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/457 (73%), Positives = 376/457 (82%), Gaps = 36/457 (7%)
Query: 1 MALATT--TSSLLSSKSLMHHRRSLLPS----------SGRSVTALKPISAVHSTDPANT 48
MAL++T T+SLL ++SL+ ++ LLPS S ++V ++PISAVHS+D
Sbjct: 1 MALSSTSTTNSLLPNRSLVQNQ-PLLPSPLKNAFFSNNSTKTVRFVQPISAVHSSDSNKI 59
Query: 49 KTVS-----------------------TKWTPDSWRNKKALQIPEYPNKAELDSVLDTLS 85
VS T+W DSW++KKALQ+PEYPN+ EL SVL T+
Sbjct: 60 PIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTID 119
Query: 86 SFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVL 145
FPPIVFAGE+R LE+RLG+AA+G AFLL GGDCAESFKEFNANNIRDTFR+LLQM VL
Sbjct: 120 EFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVL 179
Query: 146 MFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMI 205
MFGGQMPVIKVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD +SR PDP R+I
Sbjct: 180 MFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLI 239
Query: 206 RAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAA 265
RAY QS ATLNLLRAFATGGYAAMQR+ WNLDFT+HSEQGDRY+ELA+RVDEA+GFM A
Sbjct: 240 RAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTA 299
Query: 266 AGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGA 325
AGLT +HPIM +TEFWTSHECLLLPYEQ+LTR DSTSGLYYDCSAH +WVGERTRQLDGA
Sbjct: 300 AGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGA 359
Query: 326 HVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLI 385
HVEFLRG+ANPLGIKVS+KMDP LV+LI ILNP+NK GRIT+I RMGAENMRVKLPHLI
Sbjct: 360 HVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLI 419
Query: 386 RAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAIR 422
RAVR AGQIVTWVSDPMHGNTIKAP GLKTR FD+IR
Sbjct: 420 RAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 456
>sp|P27608|AROF_TOBAC Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1
Length = 542
Score = 687 bits (1773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/443 (74%), Positives = 365/443 (82%), Gaps = 33/443 (7%)
Query: 13 SKSLMHHRRSLLPS----------SGRSVTALKPISAVHSTDPANTKTVS---------- 52
+KS + +SLLPS S + V ++PISA+HS+D + VS
Sbjct: 15 NKSQLVQNQSLLPSPLKNVSFTTNSTKPVRFVQPISAIHSSDSSKNPIVSDKPSSKPSPP 74
Query: 53 -------------TKWTPDSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKL 99
T+WT +SW++KKALQ+PEYPN+ EL SVL T+ FPPIVFAGE+R L
Sbjct: 75 AATVTAAATTVTKTEWTVESWKSKKALQLPEYPNQEELQSVLKTIEEFPPIVFAGEARSL 134
Query: 100 EDRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRM 159
E+RLG+AA+G AFLL GGDCAESFKEFNANNIRDTFR+LLQM VLMFGGQMPVIKVGRM
Sbjct: 135 EERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRM 194
Query: 160 AGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLR 219
AGQFAKPRSD FEEKNGVKLPSYRGDNVNGDAFD +SR PDP R+IRAY QS ATLNLLR
Sbjct: 195 AGQFAKPRSDNFEEKNGVKLPSYRGDNVNGDAFDAKSRTPDPQRLIRAYCQSAATLNLLR 254
Query: 220 AFATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTE 279
AFATGGYAAMQR+ WNLDFT+HSEQGDRY+ELANRVDEA+GFMAAAGLT +HPIM +TE
Sbjct: 255 AFATGGYAAMQRINQWNLDFTEHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTE 314
Query: 280 FWTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGI 339
FWTSHECLLLPYEQ+LTR DSTSGLYYDCSAH +WVGERTRQLDGAHVEFLRGVANPLGI
Sbjct: 315 FWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGI 374
Query: 340 KVSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVS 399
KVS+KMDP LV+LI ILNP NK GRIT+I RMGAENMRVKLPHLIRAVR AGQIVTWVS
Sbjct: 375 KVSDKMDPSALVKLIEILNPDNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVS 434
Query: 400 DPMHGNTIKAPSGLKTRSFDAIR 422
DPMHGNTIKAP GLKTR FD+IR
Sbjct: 435 DPMHGNTIKAPCGLKTRPFDSIR 457
>sp|P37216|AROG_SOLLC Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum lycopersicum PE=2 SV=1
Length = 541
Score = 686 bits (1770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/457 (72%), Positives = 376/457 (82%), Gaps = 36/457 (7%)
Query: 1 MALAT--TTSSLLSSKSLMHHRRSLLPS----------SGRSVTALKPISAVHSTDPANT 48
MAL+T TT+SLLS+KSL+ ++ LL S S ++V ++PI+AVHS+D
Sbjct: 1 MALSTNTTTNSLLSNKSLLQNQ-PLLSSPSKNAFFSNKSTKTVRFVQPIAAVHSSDSNKN 59
Query: 49 KTVS-----------------------TKWTPDSWRNKKALQIPEYPNKAELDSVLDTLS 85
VS T+W DSW++KKALQ+PEYP++ EL SVL T+
Sbjct: 60 PIVSDKPTKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPDQEELRSVLKTID 119
Query: 86 SFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVL 145
FPPIVFAGE+R LE+RLG+AA+G AFLL GGDCAESFKEFNANNIRDTFR+LLQM VL
Sbjct: 120 EFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVL 179
Query: 146 MFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMI 205
MFGGQMPVIKVGRMAGQFAKPRSD FEEK+GVKLPSYRGDNVNGDAFD +SR PDP R+I
Sbjct: 180 MFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLI 239
Query: 206 RAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAA 265
RAY QS ATLNLLRAFATGGYAAMQR+ WNLDFT+HSEQGDRY+ELA+RVDEA+GFM A
Sbjct: 240 RAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTA 299
Query: 266 AGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGA 325
AGLT +HPIM +TEFWTSHECLLLPYEQ+LTR DSTSGL+YDCSAH +WVGERTRQLDGA
Sbjct: 300 AGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGA 359
Query: 326 HVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLI 385
HVEFLRG+ANPLGIKVS+KMDP LV+LI ILNP+NK GRIT+I RMGAENMRVKLPHLI
Sbjct: 360 HVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLI 419
Query: 386 RAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAIR 422
RAVR AGQIVTWVSDPMHGNTIKAP GLKTR FD+IR
Sbjct: 420 RAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIR 456
>sp|P37822|AROG_SOLTU Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Solanum tuberosum GN=SHKB PE=2 SV=1
Length = 511
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/404 (79%), Positives = 358/404 (88%), Gaps = 6/404 (1%)
Query: 20 RRSLLPSS--GRSVTALKPISAVHSTDPANTKTVSTKWTPDSWRNKKALQIPEYPNKAEL 77
R SL P++ GR PISAVH+ +P+ T KW+ DSW+ KKALQ+PEYP++ EL
Sbjct: 29 RFSLFPTTQHGRR----HPISAVHAAEPSKTAVKQGKWSLDSWKTKKALQLPEYPDEKEL 84
Query: 78 DSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRV 137
+SVL TL PP+VFAGE+R LE++LG+AALG AFLL GGDCAESFKEFNANNIRDTFR+
Sbjct: 85 ESVLKTLEMNPPLVFAGEARSLEEKLGEAALGKAFLLQGGDCAESFKEFNANNIRDTFRI 144
Query: 138 LLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSR 197
LLQMSVVLMFGGQ+PVIKVGRMAGQFAKPRSDP EE NGVKLPSY+GDN+NGD FD +SR
Sbjct: 145 LLQMSVVLMFGGQVPVIKVGRMAGQFAKPRSDPLEEINGVKLPSYKGDNINGDTFDEKSR 204
Query: 198 IPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVD 257
IPDPHR+IRAY QS ATLNLLRAFATGGYAAMQRV WNLDF ++ EQGDRYQELA+RVD
Sbjct: 205 IPDPHRLIRAYMQSAATLNLLRAFATGGYAAMQRVTEWNLDFVENCEQGDRYQELAHRVD 264
Query: 258 EAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGE 317
EA+GFMAAAGLT +HPIM++T+FWTSHECLLLPYEQALTREDSTSGL+YDCSAHMVWVGE
Sbjct: 265 EALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324
Query: 318 RTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENM 377
RTRQLDGAHVEFLRGVANPLGIKVS KMDP EL++LI ILNP NKPGRITVIVRMGAENM
Sbjct: 325 RTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANKPGRITVIVRMGAENM 384
Query: 378 RVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAI 421
RVKL HL+RAVR AGQIVTWV DPMHGNTIKAP GLKTR+FD+I
Sbjct: 385 RVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSI 428
>sp|P29976|AROF_ARATH Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2
Length = 525
Score = 671 bits (1732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/441 (71%), Positives = 367/441 (83%), Gaps = 22/441 (4%)
Query: 3 LATTTSSLLSSKSLMHHRRSLLPSSGRSVTALKP-----------ISAVHSTDPA----- 46
+A + +S LS++S+ S PS+ +S P ++AVH+ +PA
Sbjct: 1 MALSNASSLSTRSIYGGDLSHRPSNRQSSFTFHPAVNTKPKSVNLVTAVHAAEPARNAVS 60
Query: 47 ------NTKTVSTKWTPDSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLE 100
++ + + KWTP+SW+ KKALQ+P+YPN EL+SVL T+ +FPPIVFAGE+R LE
Sbjct: 61 VKESVASSSSGALKWTPESWKLKKALQLPDYPNANELESVLKTIEAFPPIVFAGEARNLE 120
Query: 101 DRLGQAALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMA 160
+RL AA+G AFLL GGDCAESFKEFNA NIRDTFRVLLQMS+VL FGGQ+PVIKVGRMA
Sbjct: 121 ERLADAAVGKAFLLQGGDCAESFKEFNATNIRDTFRVLLQMSIVLTFGGQVPVIKVGRMA 180
Query: 161 GQFAKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRA 220
GQFAKPRSD FEEK+GVKLPSY+GDN+NGD FD +SRIPDP+RMIRAY+QS ATLNLLRA
Sbjct: 181 GQFAKPRSDAFEEKDGVKLPSYKGDNINGDTFDEKSRIPDPNRMIRAYTQSAATLNLLRA 240
Query: 221 FATGGYAAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEF 280
FATGGYAA+QRV WNLDF + SEQ DRYQELANRVDEA+GFM+A GL +HP+MT+T+F
Sbjct: 241 FATGGYAAIQRVTQWNLDFVEQSEQADRYQELANRVDEALGFMSACGLGTDHPLMTTTDF 300
Query: 281 WTSHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIK 340
+TSHECLLLPYEQ+LTR DSTSGLYYDCSAHMVW GERTRQLDGAHVEFLRG+ANPLGIK
Sbjct: 301 YTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIK 360
Query: 341 VSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSD 400
VSNKMDP ELV+L+ ILNP NKPGRITVIVRMGAENMRVKLPHLIRAVR +GQIVTWV D
Sbjct: 361 VSNKMDPFELVKLVEILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRRSGQIVTWVCD 420
Query: 401 PMHGNTIKAPSGLKTRSFDAI 421
PMHGNTIKAP GLKTR+FD+I
Sbjct: 421 PMHGNTIKAPCGLKTRAFDSI 441
>sp|Q75LR2|AROF_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2
Length = 554
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 305/375 (81%), Positives = 343/375 (91%), Gaps = 1/375 (0%)
Query: 48 TKTVS-TKWTPDSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQA 106
TK V+ +W DSWR KKALQ+PEYPN AEL++VL T+ +FPPIVFAGE+R LE+RL A
Sbjct: 87 TKQVAPARWAVDSWRTKKALQLPEYPNAAELEAVLKTIEAFPPIVFAGEARHLEERLADA 146
Query: 107 ALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKP 166
A+G AFLL GGDCAESFKEFN NNIRDTFRVLLQMS VL FGGQMPVIKVGRMAGQFAKP
Sbjct: 147 AMGRAFLLQGGDCAESFKEFNGNNIRDTFRVLLQMSAVLTFGGQMPVIKVGRMAGQFAKP 206
Query: 167 RSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGY 226
RS+ FEE++GVKLPSYRGDN+NGDAF+ +SRIPDP RM+RAY+QS ATLNLLRAFATGGY
Sbjct: 207 RSEAFEERDGVKLPSYRGDNINGDAFNEKSRIPDPQRMVRAYAQSAATLNLLRAFATGGY 266
Query: 227 AAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHEC 286
AAMQRV WNLDFT HSEQGDRY+ELA+RVDEA+GFM+AAGLT +HP+MTST+FWTSHEC
Sbjct: 267 AAMQRVTQWNLDFTQHSEQGDRYRELAHRVDEALGFMSAAGLTVDHPLMTSTDFWTSHEC 326
Query: 287 LLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMD 346
LLLPYEQ+LTR+DST+G +YDCSAHM+WVGERTRQLDGAHVEFLRGVANPLGIKVS+KM+
Sbjct: 327 LLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMN 386
Query: 347 PKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNT 406
P ELV+LI ILNP NKPGRIT+I RMGAENMRVKLPHLIRAVR+AGQIVTW++DPMHGNT
Sbjct: 387 PTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNT 446
Query: 407 IKAPSGLKTRSFDAI 421
IKAP GLKTR FD+I
Sbjct: 447 IKAPCGLKTRPFDSI 461
>sp|Q75W16|AROG_ORYSJ Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic
OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1
Length = 539
Score = 665 bits (1717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/411 (76%), Positives = 356/411 (86%), Gaps = 24/411 (5%)
Query: 35 KPISAVHSTDPANTK-------------TVST---------KWTPDSWRNKKALQIPEYP 72
+ +SAVH+ DPA + TV+ KWT DSW+ KKALQ+PEYP
Sbjct: 36 RTVSAVHAADPAKSNGPVQAAAKASSPSTVAAPEKKPVGLGKWTVDSWKAKKALQLPEYP 95
Query: 73 NKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESFKEFNANNIR 132
++ ELDSVL T+ +FPP+VFAGE+R LE+RL AA+G AF+L GGDCAESFKEFNANNIR
Sbjct: 96 SQEELDSVLKTIETFPPVVFAGEARHLEERLADAAMGRAFVLQGGDCAESFKEFNANNIR 155
Query: 133 DTFRVLLQMSVVLMFGGQMPVIKV-GRMAGQFAKPRSDPFEEKNGVKLPSYRGDNVNGDA 191
DTFR+LLQM VLMFGGQMPV+KV GRMAGQFAKPRSD FEE++GVKLPSYRGDN+NGD
Sbjct: 156 DTFRILLQMGAVLMFGGQMPVVKVVGRMAGQFAKPRSDSFEERDGVKLPSYRGDNINGDT 215
Query: 192 FDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHSEQGDR-YQ 250
FD +SR+PDP RMIRAY+QSVATLNLLRAFATGGYAAMQRV WNLDF DHSEQGDR Y+
Sbjct: 216 FDEKSRVPDPQRMIRAYAQSVATLNLLRAFATGGYAAMQRVTQWNLDFMDHSEQGDRRYR 275
Query: 251 ELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSGLYYDCSA 310
ELA+RVDEA+GFM AAGLT +HPIMT+T+FWTSHECLLLPYEQ+LTREDSTSGL+YDCSA
Sbjct: 276 ELAHRVDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSA 335
Query: 311 HMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIV 370
HM+WVGERTRQLDGAHVEFLRGVANPLGIKVS+KM+P++LV+LI ILNP NKPGRIT+I
Sbjct: 336 HMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIIT 395
Query: 371 RMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAI 421
RMGAENMRVKLPHLIRAVRN+GQIVTW++DPMHGNTIKAP GLKTR FD+I
Sbjct: 396 RMGAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSI 446
>sp|A0MH68|AROF_CATRO Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic
OS=Catharanthus roseus GN=DHS1 PE=2 SV=2
Length = 493
Score = 511 bits (1315), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/439 (61%), Positives = 312/439 (71%), Gaps = 40/439 (9%)
Query: 3 LATTTSSLLSSK---SLMHHRRSLLPSSGRSVTALKPIS------AVHSTDPANTKTVST 53
+A + +S L+SK S H+ +L S + KP S AVH T P T S
Sbjct: 1 MAMSNTSALASKLLPSCKPHQPTLTFFSPSTTCQKKPRSSRPISAAVHVTQPPKTPISSA 60
Query: 54 KWTP----------DSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRL 103
T +SW++KKALQ+PEYP++ +LD VL T+ +FPP+VFAGE+R LE++L
Sbjct: 61 TATKRRLSLLNGVWESWKSKKALQLPEYPDEGKLDGVLKTIEAFPPLVFAGEARSLEEKL 120
Query: 104 GQAALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQF 163
QAA+GNAFLL GGDCAESFKE R F+ L FGGQ PVIKVGRMAGQF
Sbjct: 121 AQAAMGNAFLLQGGDCAESFKELMPLYSR-YFQNTASDECRLTFGGQCPVIKVGRMAGQF 179
Query: 164 AKPRSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFAT 223
AKPR DPFEEK+G+ L G V +A+ ++ S S A L ++ +A
Sbjct: 180 AKPRLDPFEEKDGLWLSGANGWPVAWEAYC----------KLQQLSPSRALLLVVCCYAE 229
Query: 224 GGYAAMQRVAH-WNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWT 282
+H +LDF +HSEQGDRYQELA+RVDEA+GFM A GLT +HPIM +TEFWT
Sbjct: 230 ---------SHPMDLDFVEHSEQGDRYQELAHRVDEALGFMDACGLTVDHPIMATTEFWT 280
Query: 283 SHECLLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVS 342
SHECLLLPYEQALTREDSTSGL+YDCSAHM+WVGERTRQLDGAHVEFLRGVANPLGIKVS
Sbjct: 281 SHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVS 340
Query: 343 NKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPM 402
KMDP ELV LI ILNP NKPGRITVIVRMGAENMRVKLPHLIRAVR AGQIVTWV DPM
Sbjct: 341 QKMDPNELVNLIEILNPTNKPGRITVIVRMGAENMRVKLPHLIRAVRGAGQIVTWVCDPM 400
Query: 403 HGNTIKAPSGLKTRSFDAI 421
HGNTIKAP GLKTR+FDAI
Sbjct: 401 HGNTIKAPCGLKTRAFDAI 419
>sp|P80574|AROF_STRCO Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Streptomyces
coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=aroH
PE=1 SV=3
Length = 450
Score = 399 bits (1026), Expect = e-110, Method: Compositional matrix adjust.
Identities = 191/375 (50%), Positives = 254/375 (67%), Gaps = 5/375 (1%)
Query: 50 TVSTKWTP---DSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQA 106
TV+ K +P ++WR+ A Q PEYP+ L +V+ L S+PP+VFAGE +L R+
Sbjct: 2 TVNAKTSPSAGNTWRDLPAAQQPEYPDTEALRAVIADLESYPPLVFAGECDQLRARMAAV 61
Query: 107 ALGNAFLLMGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKP 166
A G AFLL GGDCAE+F +A++IR+ + LLQM VL + +PV+KVGR+AGQ++KP
Sbjct: 62 AKGEAFLLQGGDCAEAFDAVSADHIRNKLKTLLQMGAVLTYAASVPVVKVGRIAGQYSKP 121
Query: 167 RSDPFEEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGY 226
RS P E ++GV LP+YRGD+VNG F +RIPDP R+ R Y S +TLNL+RAF TGGY
Sbjct: 122 RSKPTETRDGVTLPTYRGDSVNGFDFTEAARIPDPERLKRMYHASASTLNLVRAFTTGGY 181
Query: 227 AAMQRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHEC 286
A +++V WN DF S G RY++LA +D A+ FM A G + EF++SHE
Sbjct: 182 ADLRQVHAWNQDFVKSSPSGQRYEQLAREIDNALNFMRACGTDPAE--FQTVEFFSSHEA 239
Query: 287 LLLPYEQALTREDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMD 346
LLL YE ALTR DS +G YD S HMVW+GERTRQLD AH+EF + NP+GIK+
Sbjct: 240 LLLDYESALTRVDSRTGQLYDVSGHMVWIGERTRQLDHAHIEFASRIRNPIGIKLGPSTT 299
Query: 347 PKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNT 406
+E ++ I L+P+ +PGR+T IVRMGA+ +R KLP L+ V +G V W++DPMHGNT
Sbjct: 300 AEEALQYIERLDPEREPGRLTFIVRMGADKIRDKLPELVEKVTASGATVAWITDPMHGNT 359
Query: 407 IKAPSGLKTRSFDAI 421
+A SG KTR FD +
Sbjct: 360 YEAASGHKTRRFDDV 374
>sp|O53512|AROG_MYCTU Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
tuberculosis GN=aroG PE=1 SV=1
Length = 462
Score = 312 bits (800), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/367 (43%), Positives = 226/367 (61%), Gaps = 9/367 (2%)
Query: 58 DSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGG 117
D+ K A Q P +P L ++ L S PP+ E +L+++L Q A G AFLL GG
Sbjct: 27 DAALAKPAAQQPTWPADQAL-AMRTVLESVPPVTVPSEIVRLQEQLAQVAKGEAFLLQGG 85
Query: 118 DCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGV 177
DCAE+F + +IR R LLQM+VVL +G MPV+KV R+AGQ+AKPRS + + +
Sbjct: 86 DCAETFMDNTEPHIRGNVRALLQMAVVLTYGASMPVVKVARIAGQYAKPRS---ADIDAL 142
Query: 178 KLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNL 237
L SYRGD +NG A D +R DP R++RAY+ + A +NL+RA + G A++ V WN
Sbjct: 143 GLRSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLVRALTSSGLASLHLVHDWNR 202
Query: 238 DFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTR 297
+F S G RY+ LA +D + FM+A G+ + + + E + SHE L+L YE+A+ R
Sbjct: 203 EFVRTSPAGARYEALATEIDRGLRFMSACGVADRN--LQTAEIYASHEALVLDYERAMLR 260
Query: 298 ---EDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLI 354
D +D SAH VW+GERTRQ+DGAH+ F + +ANP+G+K+ M P+ V +
Sbjct: 261 LSDGDDGEPQLFDLSAHTVWIGERTRQIDGAHIAFAQVIANPVGVKLGPNMTPELAVEYV 320
Query: 355 VILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLK 414
L+P NKPGR+T++ RMG +R LP ++ V+ G V W DPMHGNT ++ +G K
Sbjct: 321 ERLDPHNKPGRLTLVSRMGNHKVRDLLPPIVEKVQATGHQVIWQCDPMHGNTHESSTGFK 380
Query: 415 TRSFDAI 421
TR FD I
Sbjct: 381 TRHFDRI 387
>sp|A0R033|AROG_MYCS2 Phospho-2-dehydro-3-deoxyheptonate aldolase AroG OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=aroG PE=3
SV=1
Length = 464
Score = 309 bits (791), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/370 (43%), Positives = 225/370 (60%), Gaps = 13/370 (3%)
Query: 58 DSWRNKKALQIPEY-PNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMG 116
DS K A+Q P + P+ A+ ++ L S PP+ E KL+ L A G AFLL G
Sbjct: 27 DSALAKPAVQQPSWDPDAAK--AMRTVLESVPPVTVPSEIEKLKGLLADVAQGKAFLLQG 84
Query: 117 GDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNG 176
GDCAE+F + +IR R LLQM+VVL +G MPV+KV R+AGQ+AKPRS + +
Sbjct: 85 GDCAETFVDNTEPHIRANIRTLLQMAVVLTYGASMPVVKVARIAGQYAKPRS---SDVDA 141
Query: 177 VKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWN 236
+ L SYRGD +NG A D +R DP R++RAY+ + A +NL+RA + G A++ V WN
Sbjct: 142 LGLKSYRGDMINGFAPDAAAREHDPSRLVRAYANASAAMNLMRALTSSGLASLHLVHEWN 201
Query: 237 LDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALT 296
+F S G RY+ LA +D + FM+A G+ + + + E + SHE L+L YE+A+
Sbjct: 202 REFVRTSPAGARYEALAGEIDRGLNFMSACGVADRN--LQTAEIFASHEALVLDYERAML 259
Query: 297 R-----EDSTSGLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELV 351
R E + YD SAH +W+GERTRQLDGAHV F +ANP+G+K+ P+ V
Sbjct: 260 RLSNPAETDGAAKLYDQSAHYLWIGERTRQLDGAHVAFAEVIANPIGVKLGPTTTPELAV 319
Query: 352 RLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPS 411
+ L+P N+PGR+T++ RMG +R LP +I V+ G V W DPMHGNT ++ +
Sbjct: 320 EYVERLDPNNEPGRLTLVTRMGNNKVRDLLPPIIEKVQATGHQVIWQCDPMHGNTHESST 379
Query: 412 GLKTRSFDAI 421
G KTR FD I
Sbjct: 380 GYKTRHFDRI 389
>sp|P80576|AROF_NEUCR Phospho-2-dehydro-3-deoxyheptonate aldolase OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=aro-8 PE=1 SV=2
Length = 481
Score = 308 bits (790), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 168/383 (43%), Positives = 226/383 (59%), Gaps = 19/383 (4%)
Query: 55 WTPDSWRNKKALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLL 114
W PDSWR+K Q PEYP+KA L+ + L + PPIV E +L + L A G AFLL
Sbjct: 12 WAPDSWRSKPIKQCPEYPDKAALEKATNELKTLPPIVLPNEIIRLREHLRDVAQGKAFLL 71
Query: 115 MGGDCAESFKEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEK 174
GGDCAE F + I ++LLQMS+VL++G PV+++GRMAGQ+AKPRS P E
Sbjct: 72 QGGDCAELFSYCQQDVIESKIKLLLQMSLVLLWGADKPVVRIGRMAGQYAKPRSSPVETI 131
Query: 175 NGVKLPSYRGDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAH 234
NG ++PS+RGD +NG F P R DP+R++RAY S ATLN +R G A +
Sbjct: 132 NGKEVPSFRGDILNG--FHPDERELDPNRLVRAYQYSSATLNYIRGAIGSGIADLHGPLD 189
Query: 235 WNLDFTDHSEQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQA 294
W L +YQE +R+ E + FM G N + T E +TSHE LLL YE+
Sbjct: 190 WGLGHVRDPALKSKYQETVDRIQEMLRFMHTIGADQNEKLST-VELFTSHEGLLLEYEEP 248
Query: 295 LTR-----------EDSTS---GLYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIK 340
LTR DST+ YY+ SAH +W+G+RTRQ+D AHVE+ RG+ANP+G+K
Sbjct: 249 LTRLLNHPSVRSYPPDSTTPPKKEYYNTSAHFLWIGDRTRQIDHAHVEYFRGIANPIGVK 308
Query: 341 VSNKMDPKELVRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNA--GQIVTWV 398
+ +L+ ++ LNP +PG++T+I R GA+ + LP IR V ++ + V W
Sbjct: 309 IGPSTPTSDLLPMLRTLNPNREPGKVTLITRYGADKVASLLPAHIRTVESSEYARTVVWQ 368
Query: 399 SDPMHGNTIKAPSGLKTRSFDAI 421
DPMHGNT G+KTR F I
Sbjct: 369 CDPMHGNTQSVSGGIKTRKFSDI 391
>sp|Q51517|PHZC_PSECL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
chlororaphis GN=phzC PE=3 SV=1
Length = 400
Score = 202 bits (515), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 175/358 (48%), Gaps = 47/358 (13%)
Query: 64 KALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESF 123
+A Q P++ ++L L ++ + L L + A G A ++ GDCAE
Sbjct: 12 EAFQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMVIQSGDCAEDM 71
Query: 124 KEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYR 183
E +++ VL ++ Q PV++VGR+AGQFAKPRS+ E V+LP YR
Sbjct: 72 DESTPDHVARKAAVLDILAGTFRLVTQQPVVRVGRIAGQFAKPRSNNNERIGDVELPVYR 131
Query: 184 GDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHS 243
GD VNG R D R++R YS + D H
Sbjct: 132 GDMVNGREAVCGHRQHDAQRLVRGYSAA-------------------------RDIMQH- 165
Query: 244 EQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSG 303
+G+ A +A+ ++ + WT+HE L+L YE R+D G
Sbjct: 166 ----------------LGWKA----SASQEQLSGSPAWTNHEMLVLDYELPQLRQDE-QG 204
Query: 304 LYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKP 363
+ S H W+GERTRQL GAHV L V NP+ KV + +L+ L L+ K +P
Sbjct: 205 RVFLGSTHWPWIGERTRQLTGAHVTLLSEVLNPVACKVGPDITQDQLLSLCERLDAKREP 264
Query: 364 GRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAI 421
GR+T+I RMGA+ + +LP L+ AVR AG + W+SDPMHGNTI AP G KTR AI
Sbjct: 265 GRLTLIARMGAQKVAERLPPLVEAVRQAGHKIIWLSDPMHGNTIVAPCGNKTRMVQAI 322
>sp|Q51789|PHZC_PSEFL Probable phospho-2-dehydro-3-deoxyheptonate aldolase OS=Pseudomonas
fluorescens GN=phzC PE=3 SV=1
Length = 400
Score = 202 bits (514), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 174/358 (48%), Gaps = 47/358 (13%)
Query: 64 KALQIPEYPNKAELDSVLDTLSSFPPIVFAGESRKLEDRLGQAALGNAFLLMGGDCAESF 123
+ALQ P++ ++L L ++ + L L + A G A ++ GDCAE
Sbjct: 12 EALQQPQWSEPSQLHDAQAYLRDSASLIRVEDILVLRATLARVAAGEAMIIQCGDCAEDM 71
Query: 124 KEFNANNIRDTFRVLLQMSVVLMFGGQMPVIKVGRMAGQFAKPRSDPFEEKNGVKLPSYR 183
E A+++ +L ++ Q PV++VGR+AGQFAKPRS+ E V+LP YR
Sbjct: 72 DESAADHVTRKAALLDMLAGTFRLVTQQPVVRVGRIAGQFAKPRSNHSERIGDVELPVYR 131
Query: 184 GDNVNGDAFDPQSRIPDPHRMIRAYSQSVATLNLLRAFATGGYAAMQRVAHWNLDFTDHS 243
GD VNG R D R++R GY A Q D H
Sbjct: 132 GDMVNGRDAVLGHRQHDAQRLVR------------------GYRAAQ-------DIMQH- 165
Query: 244 EQGDRYQELANRVDEAIGFMAAAGLTANHPIMTSTEFWTSHECLLLPYEQALTREDSTSG 303
+G+ +G +T + WTSHE L+L YE R D G
Sbjct: 166 ----------------LGWKEPSG----QEQLTGSPAWTSHEMLVLDYELPQVRRDE-QG 204
Query: 304 LYYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKP 363
+ S H W+GERTRQL GAHV L V NP+ KV + +L+ L L+P+ +P
Sbjct: 205 RTFLGSTHWPWIGERTRQLTGAHVALLSEVLNPVACKVGPDITQDQLLSLCERLDPRREP 264
Query: 364 GRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAPSGLKTRSFDAI 421
GR+T+I RMGA + +LP L+ AVR AG + W+SDPMHGNTI AP G KTR I
Sbjct: 265 GRLTLIARMGAHKVADRLPPLVEAVRRAGHKIIWLSDPMHGNTIVAPCGNKTRMVQTI 322
>sp|P55911|AROF_STRLI Phospho-2-dehydro-3-deoxyheptonate aldolase (Fragment)
OS=Streptomyces lividans PE=3 SV=1
Length = 146
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 351 VRLIVILNPKNKPGRITVIVRMGAENMRVKLPHLIRAVRNAGQIVTWVSDPMHGNTIKAP 410
++ I L+P+ +PGR+T IVRMGA+ +R KLP L+ V W++DPMHGNT +A
Sbjct: 1 LQYIERLDPEREPGRLTFIVRMGADKIRDKLPELVERSPPPA-TVAWITDPMHGNTYEAA 59
Query: 411 SGLKTRSFDAI 421
KTR FD +
Sbjct: 60 PVHKTRRFDDV 70
>sp|P53366|ADML_PIG ADM OS=Sus scrofa GN=ADM PE=1 SV=1
Length = 188
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 183 RGDNVNGDAFDPQSRIPDPHRM-IRAYSQSVATLNLLRAFATG-GYAAMQRVAHWNLDFT 240
R +V G + PQ+ IPD R+ ++ Y QS+ LR+F G +Q++AH FT
Sbjct: 69 RPQDVKGSSRSPQASIPDAARIRVKRYRQSMNNFQGLRSFGCRFGTCTVQKLAHQIYQFT 128
Query: 241 DHSEQG 246
D + G
Sbjct: 129 DKDKDG 134
>sp|O62827|ADML_BOVIN ADM OS=Bos taurus GN=ADM PE=2 SV=2
Length = 188
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 183 RGDNVNGDAFDPQSRIPDPHRM-IRAYSQSVATLNLLRAFATG-GYAAMQRVAHWNLDFT 240
R +V G + PQ+ PD R+ ++ Y QS+ LR+F G +Q++AH FT
Sbjct: 69 RPQDVKGASRSPQASSPDAARIRVKRYRQSLNNFQGLRSFGCRFGTCTVQKLAHQIYHFT 128
Query: 241 DHSEQG 246
D + G
Sbjct: 129 DKDKDG 134
>sp|O77559|ADML_CANFA ADM OS=Canis familiaris GN=ADM PE=2 SV=2
Length = 188
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 172 EEKNGVKLPSYRGDNVNGDAFDPQSRIPDPHRM-IRAYSQSVATLNLLRAFATG-GYAAM 229
E K G R +V G + +PQ+ PD R+ ++ Y QS+ R+F G +
Sbjct: 58 EVKAGPAQTLIRTQDVKGASRNPQTSGPDAARIRVKRYRQSMNNFQGPRSFGCRFGTCTV 117
Query: 230 QRVAHWNLDFTDHSEQG 246
Q++AH FTD+ + G
Sbjct: 118 QKLAHQIYQFTDNDKDG 134
>sp|Q9HXN1|MLTF_PSEAE Membrane-bound lytic murein transglycosylase F OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=mltF PE=3 SV=2
Length = 490
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 314 WVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMG 373
W + GAH+E R +A G+ + +D K +++ L K + G
Sbjct: 380 WFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVK---KMLPRLAQKQWYAKTRYGYARG 436
Query: 374 AENMRVKLPHLIRAVRNAGQIVTWVSDP-MHGNTIKAPSGL 413
E + H ++ VR I+TWV+ P M G+ I A SGL
Sbjct: 437 GETV-----HFVQNVRRYYDILTWVTQPQMEGSQI-AESGL 471
>sp|A7IB61|HELS_METB6 Putative ski2-type helicase OS=Methanoregula boonei (strain 6A8)
GN=Mboo_2458 PE=3 SV=1
Length = 723
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 151 MPVIKVGRMAGQFAKPRSDPFEE-----KNGVKLPSYRGDNVNGDAFDPQSRIPDPHRMI 205
+PV + +MAG+ +PR DP+ E K ++P + +A D SRI +P
Sbjct: 360 IPVSEYRQMAGRAGRPRLDPYGEAVLIAKEAEQVPELFEVYIEAEAEDVHSRIAEP---- 415
Query: 206 RAYSQSVATLNLLRAFATGGYAAM--QRVAHWNLDFTDHSEQGDRYQELANRVDEAIGFM 263
A + + G+A + N F H + R A +DEA+ F+
Sbjct: 416 ------TALYTHVLSLVASGFAGTRGELTEFMNRSFYVHEHKQGRLIHRA--IDEALQFL 467
Query: 264 AAA 266
A
Sbjct: 468 ITA 470
>sp|Q02RN8|MLTF_PSEAB Membrane-bound lytic murein transglycosylase F OS=Pseudomonas
aeruginosa (strain UCBPP-PA14) GN=mltF PE=3 SV=2
Length = 489
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 314 WVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMG 373
W + GAH+E R +A G+ + +D K +++ L K + G
Sbjct: 379 WFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVK---KMLPRLAQKQWYAKTRYGYARG 435
Query: 374 AENMRVKLPHLIRAVRNAGQIVTWVSDP-MHGNTIKAPSGL 413
E + H ++ VR I+TWV+ P M G+ I A SGL
Sbjct: 436 GETV-----HFVQNVRRYYDILTWVTQPQMEGSQI-AESGL 470
>sp|A6V102|MLTF_PSEA7 Membrane-bound lytic murein transglycosylase F OS=Pseudomonas
aeruginosa (strain PA7) GN=mltF PE=3 SV=1
Length = 490
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 314 WVGERTRQLDGAHVEFLRGVANPLGIKVSNKMDPKELVRLIVILNPKNKPGRITVIVRMG 373
W + GAH+E R +A G+ + +D K+++ P+ R R G
Sbjct: 380 WFALAAYNIGGAHLEDARKMAEKEGLNPNKWLDVKKML-------PRLAQKRWYAKTRYG 432
Query: 374 AENMRVKLPHLIRAVRNAGQIVTWVSDP-MHGNTIKAPSGL 413
+ H ++ VR I+TWV+ P M G+ I A SGL
Sbjct: 433 YARGGETV-HFVQNVRRYYDILTWVTQPQMEGSQI-AESGL 471
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 155,667,974
Number of Sequences: 539616
Number of extensions: 6429755
Number of successful extensions: 14458
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 14413
Number of HSP's gapped (non-prelim): 27
length of query: 422
length of database: 191,569,459
effective HSP length: 120
effective length of query: 302
effective length of database: 126,815,539
effective search space: 38298292778
effective search space used: 38298292778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)