BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036425
(252 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O24412|PSD7_ARATH Probable 26S proteasome non-ATPase regulatory subunit 7
OS=Arabidopsis thaliana GN=RPN8 PE=2 SV=1
Length = 308
Score = 459 bits (1182), Expect = e-129, Method: Compositional matrix adjust.
Identities = 222/247 (89%), Positives = 232/247 (93%)
Query: 4 SVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHN 63
+VPFEEDDKDP IWFLDHNYHESM+ MFKRINAKEHVVGWYSTGPKLRENDLD+H LF+
Sbjct: 62 AVPFEEDDKDPSIWFLDHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNG 121
Query: 64 YVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVE 123
YVPNPVLVIIDVQPKELGIPTKAYY VEEVKENATQKSQKVFVHV +EIAAHEVEEIGVE
Sbjct: 122 YVPNPVLVIIDVQPKELGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVE 181
Query: 124 HLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDV 183
HLLRDVKDTTISTLA EVT KLTALKGLDARLREIR YLDLVI+ KLPLNHEILYHLQDV
Sbjct: 182 HLLRDVKDTTISTLATEVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDV 241
Query: 184 FNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKEHEKTEDAKP 243
FNLLPNLNV EL+KAFSVKTNDMMLVIYLSSLIRSVIALHNLINNK+LNKEHEK ED+KP
Sbjct: 242 FNLLPNLNVNELVKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKLLNKEHEKAEDSKP 301
Query: 244 TAVPTAS 250
A+P S
Sbjct: 302 VAIPATS 308
>sp|Q54WI8|PSD7_DICDI 26S proteasome non-ATPase regulatory subunit 7 OS=Dictyostelium
discoideum GN=psmD7 PE=3 SV=1
Length = 325
Score = 301 bits (771), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 142/249 (57%), Positives = 190/249 (76%), Gaps = 1/249 (0%)
Query: 4 SVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHN 63
+PFEED+ +P IWFLDHN+HE+M++MFK+INA+E+VVGWYSTGPK+R D DI++LF
Sbjct: 53 GLPFEEDEANPNIWFLDHNFHENMFAMFKKINARENVVGWYSTGPKIRPADQDINELFRR 112
Query: 64 YVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVE 123
Y PNPV+VIIDV PKELGIPTK+Y VEE+ ++ ++ + + F H+PS I A E EEI +E
Sbjct: 113 YTPNPVMVIIDVAPKELGIPTKSYVTVEEINKDTSESTMR-FQHIPSSIDAVEAEEICIE 171
Query: 124 HLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDV 183
HLLRDVKD++IS+L ++T K +LK L L+E++ YL LV D LP NH+I+ ++QD+
Sbjct: 172 HLLRDVKDSSISSLTTQITDKKISLKHLLTNLQEMQHYLKLVCDGTLPPNHQIIGYIQDI 231
Query: 184 FNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKEHEKTEDAKP 243
NL PNLN E+ K+F+V+ ND M VIYLSS+IRS+IALHNLI NK N+E EK D
Sbjct: 232 INLSPNLNANEISKSFAVQNNDTMSVIYLSSMIRSIIALHNLIINKTANREAEKKADIIN 291
Query: 244 TAVPTASSS 252
+ PT ++S
Sbjct: 292 STPPTTATS 300
>sp|Q3ZBD0|PSD7_BOVIN 26S proteasome non-ATPase regulatory subunit 7 OS=Bos taurus
GN=PSMD7 PE=2 SV=1
Length = 322
Score = 294 bits (753), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 191/237 (80%), Gaps = 1/237 (0%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
+VPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L
Sbjct: 54 FAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMK 113
Query: 63 NYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 122
Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GV
Sbjct: 114 RYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGV 172
Query: 123 EHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQD 182
EHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IRGYL+ V KLP+NH+I+Y LQD
Sbjct: 173 EHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRGYLEKVATGKLPINHQIIYQLQD 232
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKEHEKTE 239
VFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALHNLINNKI N++ EK E
Sbjct: 233 VFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRDAEKKE 289
>sp|Q8WZY4|RPN8_NEUCR 26S proteasome regulatory subunit rpn-8 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=rpn-8 PE=3 SV=1
Length = 352
Score = 293 bits (749), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/253 (56%), Positives = 188/253 (74%), Gaps = 14/253 (5%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
+VPFEEDDKDP +WFLDHNY ESM MFK++NA+E ++GWY +GPKLR +DLDI++LF
Sbjct: 62 FAVPFEEDDKDPSVWFLDHNYVESMNDMFKKVNAREKLIGWYHSGPKLRASDLDINELFK 121
Query: 63 NYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 122
Y PNP+LVI+DVQPKE G+PT AY+ V+E+K++ T S K FVH PS I A E EEIGV
Sbjct: 122 RYTPNPLLVIVDVQPKETGVPTDAYFAVDEIKDDGTTTS-KTFVHTPSIIEAEEAEEIGV 180
Query: 123 EHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQD 182
EHLLRD++D + TL+ +T ++ +L+GL RLR+I+ YL V+D +LP+NH IL +LQD
Sbjct: 181 EHLLRDIRDVAVGTLSTRITNQMRSLQGLHHRLRDIQAYLQKVLDGQLPVNHAILGNLQD 240
Query: 183 VFNLLPNLNV-------------AELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNK 229
VFNLLPNL+ +EL A S+KTND ++ IYLSSLIR++ A H+LI NK
Sbjct: 241 VFNLLPNLSTPKSGPGATGTNADSELNHAMSIKTNDQLMAIYLSSLIRAITAFHDLIENK 300
Query: 230 ILNKEHEKTEDAK 242
I N++ ++ DAK
Sbjct: 301 IQNRQQQEENDAK 313
>sp|P51665|PSD7_HUMAN 26S proteasome non-ATPase regulatory subunit 7 OS=Homo sapiens
GN=PSMD7 PE=1 SV=2
Length = 324
Score = 286 bits (733), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 187/232 (80%), Gaps = 1/232 (0%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
+VPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L
Sbjct: 54 FAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMK 113
Query: 63 NYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 122
Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GV
Sbjct: 114 RYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGV 172
Query: 123 EHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQD 182
EHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y LQD
Sbjct: 173 EHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVATGKLPINHQIIYQLQD 232
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKE 234
VFNLLP++++ E +KAF +KTND M+V+YL+SLIRSV+ALHNLINNKI N++
Sbjct: 233 VFNLLPDVSLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRD 284
>sp|P26516|PSD7_MOUSE 26S proteasome non-ATPase regulatory subunit 7 OS=Mus musculus
GN=Psmd7 PE=1 SV=2
Length = 321
Score = 286 bits (732), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 141/232 (60%), Positives = 186/232 (80%), Gaps = 1/232 (0%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
+VPF+EDDKD +WFLDH+Y E+MY MFK++NA+E +VGWY TGPKL +ND+ I++L
Sbjct: 54 FAVPFDEDDKDDSVWFLDHDYLENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMK 113
Query: 63 NYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 122
Y PN VLVIIDV+PK+LG+PT+AY VEEV ++ T S K F HV SEI A E EE+GV
Sbjct: 114 RYCPNSVLVIIDVKPKDLGLPTEAYISVEEVHDDGTPTS-KTFEHVTSEIGAEEAEEVGV 172
Query: 123 EHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQD 182
EHLLRD+KDTT+ TL+ +T ++ LKGL+++L +IR YL+ V KLP+NH+I+Y LQD
Sbjct: 173 EHLLRDIKDTTVGTLSQRITNQVHGLKGLNSKLLDIRSYLEKVASGKLPINHQIIYQLQD 232
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKE 234
VFNLLP+ ++ E +KAF +KTND M+V+YL+SLIRSV+ALHNLINNKI N++
Sbjct: 233 VFNLLPDASLQEFVKAFYLKTNDQMVVVYLASLIRSVVALHNLINNKIANRD 284
>sp|P26270|PSD7_DROME 26S proteasome non-ATPase regulatory subunit 7 OS=Drosophila
melanogaster GN=Mov34 PE=1 SV=6
Length = 338
Score = 285 bits (729), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 186/237 (78%), Gaps = 1/237 (0%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
+VPF+EDDKD +WFLDH+Y E+MY MFK++NA+E VVGWY TGPKL +ND+ I++L
Sbjct: 57 FAVPFDEDDKDKSVWFLDHDYLENMYGMFKKVNARERVVGWYHTGPKLHQNDIAINELVR 116
Query: 63 NYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGV 122
Y PN VLVIID +PK+LG+PT+AY VEEV ++ + S K F HVPSEI A E EE+GV
Sbjct: 117 RYCPNSVLVIIDAKPKDLGLPTEAYISVEEVHDDGSPTS-KTFEHVPSEIGAEEAEEVGV 175
Query: 123 EHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQD 182
EHLLRD+KDTT+ +L+ ++T +L LKGL+A+LR+I+ YL V D K+P+NH+I+Y LQD
Sbjct: 176 EHLLRDIKDTTVGSLSQKITNQLMGLKGLNAQLRDIKQYLQRVGDSKMPINHQIVYQLQD 235
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNKEHEKTE 239
+FNLLP++ + VKTND MLV+YL+S++RS+IALHNLINNK+ N++ E+ +
Sbjct: 236 IFNLLPDITNDQFTGTMYVKTNDQMLVVYLASMVRSIIALHNLINNKLANRDAEEGK 292
>sp|O74440|RPN8_SCHPO 26S proteasome regulatory subunit rpn8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpn8 PE=3 SV=1
Length = 324
Score = 259 bits (662), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 183/251 (72%), Gaps = 12/251 (4%)
Query: 4 SVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHN 63
++PFEED+K+ +WFLDHN+ ESM MFK+INA E +VGWY TGP+LR +DL+I+ L
Sbjct: 62 AIPFEEDEKNASVWFLDHNFMESMNEMFKKINANEKLVGWYHTGPQLRPSDLEINNLLKK 121
Query: 64 YVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVE 123
Y+PNPVLVIIDV+PK +G+PT AY+ ++E++++ + KS + FVH+PS I A E EEIGVE
Sbjct: 122 YIPNPVLVIIDVKPKSVGLPTNAYFAIDEIEDDGS-KSSRTFVHLPSSIEAEEAEEIGVE 180
Query: 124 HLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDV 183
HLLRD +D ++ TLA VT + +L+GL RL EI YL V+D +LP+NH IL LQ V
Sbjct: 181 HLLRDTRDASVGTLATRVTQQAQSLQGLGQRLTEIADYLRKVVDGQLPINHAILAELQSV 240
Query: 184 FNLLPNLNVAELI----------KAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILNK 233
FNLLPN+ ++ +AF+V +ND ++ IY+SS++R+VIALH+L+++ +K
Sbjct: 241 FNLLPNIFSGPVVSEQALESEAQRAFNVNSNDQLMSIYISSIVRAVIALHDLLDSLAASK 300
Query: 234 EHEKTEDAKPT 244
E+ +D KPT
Sbjct: 301 AMEQ-QDIKPT 310
>sp|Q6FMD8|RPN8_CANGA 26S proteasome regulatory subunit RPN8 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RPN8 PE=3 SV=1
Length = 329
Score = 248 bits (633), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 123/250 (49%), Positives = 175/250 (70%), Gaps = 19/250 (7%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
++PFEED+K+ +WFLDHNY ESM M K+INAKE ++GWY +GPKLR +DL I++LF
Sbjct: 52 FALPFEEDEKNSDVWFLDHNYIESMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFK 111
Query: 63 NYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
Y NP+L+I+DV+ +++G+PT AY VE+VK++ T ++K F+H+P + A E EEIG
Sbjct: 112 KYTQGNPLLLIVDVKQQDVGLPTDAYMAVEQVKDDGTS-TEKTFLHLPCTVEAEEAEEIG 170
Query: 122 VEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQ 181
VEHLLRDV+D L+ +T +L +LKGL +L +I YL+ VI+ +LP+NH IL LQ
Sbjct: 171 VEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQKKLNDIVIYLNKVINNELPVNHTILGKLQ 230
Query: 182 DVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIALHN 224
DVFNLLPNL E L +A +VKTND ++VIY+++L+R++IA +
Sbjct: 231 DVFNLLPNLGYNEETDVSATSNDMVTASNNLQRALTVKTNDELMVIYITNLVRAIIAFDD 290
Query: 225 LINNKILNKE 234
LI NK+ NK+
Sbjct: 291 LIENKMQNKK 300
>sp|Q08723|RPN8_YEAST 26S proteasome regulatory subunit RPN8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN8 PE=1 SV=3
Length = 338
Score = 240 bits (613), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 130/269 (48%), Positives = 184/269 (68%), Gaps = 20/269 (7%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
++PFEED+K+ +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I++LF
Sbjct: 52 FALPFEEDEKNSDVWFLDHNYIENMNEMCKKINAKEKLIGWYHSGPKLRASDLKINELFK 111
Query: 63 NYVPN-PVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
Y N P+L+I+DV+ + +G+PT AY +E+VK++ T ++K F+H+P I A E EEIG
Sbjct: 112 KYTQNNPLLLIVDVKQQGVGLPTDAYVAIEQVKDDGTS-TEKTFLHLPCTIEAEEAEEIG 170
Query: 122 VEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQ 181
VEHLLRDV+D L+ +T +L +LKGL ++L+++ YLD VI+++LP+NH IL LQ
Sbjct: 171 VEHLLRDVRDQAAGGLSIRLTNQLKSLKGLQSKLKDVVEYLDKVINKELPINHTILGKLQ 230
Query: 182 DVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIALHN 224
DVFNLLPNL + L KA +VKTND ++VIY+S+L+RS+IA +
Sbjct: 231 DVFNLLPNLGTPDDDEIDVENHDRINISNNLQKALTVKTNDELMVIYISNLVRSIIAFDD 290
Query: 225 LINNKILNKE-HEKTEDAKPTAVPTASSS 252
LI NKI NK+ E+ K + V S S
Sbjct: 291 LIENKIQNKKIQEQRVKDKQSKVSDDSES 319
>sp|Q75F44|RPN8_ASHGO 26S proteasome regulatory subunit RPN8 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=RPN8 PE=3 SV=1
Length = 326
Score = 236 bits (602), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 176/260 (67%), Gaps = 20/260 (7%)
Query: 3 ISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFH 62
++PFEED+K+P +WFLDHNY E+M M K+INAKE ++GWY +GPKLR +DL I+ LF
Sbjct: 52 FALPFEEDEKNPDVWFLDHNYIENMNDMCKKINAKEKMIGWYHSGPKLRSSDLKINGLFK 111
Query: 63 NYVP-NPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
Y N +L+I+DV+ + +G+PT AY +EEVK++ + +++ FVH+P+ I A E EEIG
Sbjct: 112 KYTQGNSLLLIVDVKQQGVGLPTDAYMAIEEVKDDGSS-TERTFVHLPTAIEAEEAEEIG 170
Query: 122 VEHLLRDVKDTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQ 181
VEHLLRDV+D L+ +T +L +L+GL +LR+I YLD V +LP NH IL LQ
Sbjct: 171 VEHLLRDVRDQAAGNLSLRLTNQLKSLQGLQRKLRDIVAYLDKVNSGQLPANHIILGKLQ 230
Query: 182 DVFNLLPNLNVAE-----------------LIKAFSVKTNDMMLVIYLSSLIRSVIALHN 224
DVFNLLPNL + L KA +VKTND ++VIY+S+L+R++IA N
Sbjct: 231 DVFNLLPNLGSPDEEAPATKKDDVLASSNTLQKALTVKTNDELMVIYISNLMRAIIAFDN 290
Query: 225 LINNKILNKE-HEKTEDAKP 243
LI NKI NK+ E D +P
Sbjct: 291 LIENKIKNKKLQEAKRDPEP 310
>sp|Q54C92|CSN6_DICDI COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum
GN=csn6 PE=1 SV=1
Length = 309
Score = 82.4 bits (202), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 104/199 (52%), Gaps = 5/199 (2%)
Query: 40 VVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDV-QPKELGIPTKAYYDVEEVKENAT 98
++GWYSTG ++ ++D+ +H+ + +P+ +++D PK +P Y E
Sbjct: 107 LLGWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTDSPKSKDLPVIIY---ESELHIVN 163
Query: 99 QKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-KDTTISTLANEVTGKLTALKGLDARLRE 157
+ +FV P +I E E IGV H+ + + S L + + A+ L+ R++
Sbjct: 164 DEPTTIFVKTPYKIQTGEAERIGVNHIAKVTPSGSEGSGLTSHLFTMHNAISMLNIRVKA 223
Query: 158 IRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIR 217
+ YL V +++LP IL + N LP ++ + K++ + ND++LV YL+S+ +
Sbjct: 224 LSDYLQAVKEKRLPYEQNILRKASSLCNQLPTIDTHDFKKSYLQEYNDVLLVTYLASITK 283
Query: 218 SVIALHNLINNKILNKEHE 236
+ +L++ I+ +++ E +
Sbjct: 284 TSASLNDTIDKYLVSNEKQ 302
>sp|O88545|CSN6_MOUSE COP9 signalosome complex subunit 6 OS=Mus musculus GN=Cops6 PE=1
SV=1
Length = 324
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 97 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 156
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 157 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 213
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 214 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 273
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 274 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 304
>sp|Q5REY0|CSN6_PONAB COP9 signalosome complex subunit 6 OS=Pongo abelii GN=COPS6 PE=2
SV=1
Length = 328
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 101 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 160
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 161 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 217
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 218 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 277
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 278 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 308
>sp|A7TX81|CSN6_PIG COP9 signalosome complex subunit 6 OS=Sus scrofa GN=COPS6 PE=2 SV=1
Length = 323
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 96 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 155
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 156 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 212
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 213 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 272
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 273 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 303
>sp|Q7L5N1|CSN6_HUMAN COP9 signalosome complex subunit 6 OS=Homo sapiens GN=COPS6 PE=1
SV=1
Length = 327
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 100 IDKEYYYTKEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 159
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 160 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 216
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 217 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 276
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 277 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 307
>sp|Q6NUC2|CSN6_XENLA COP9 signalosome complex subunit 6 OS=Xenopus laevis GN=cops6 PE=2
SV=1
Length = 318
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
++ Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 91 INKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTK 150
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P Y E V + ++ + + +A E E IGV+H+ R + ST
Sbjct: 151 HTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENST 207
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R+R I Y+ ++P NHEIL + + LP L+ +
Sbjct: 208 VAEHLIAQHSAIKMLHSRVRLILEYVRAAEGGEVPFNHEILREASALCHCLPVLSTDKFK 267
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 268 TDFYDQCNDVGLMSYLGTITKTCNTMNQFVN 298
>sp|A6QQ21|CSN6_BOVIN COP9 signalosome complex subunit 6 OS=Bos taurus GN=COPS6 PE=2 SV=1
Length = 324
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 104/211 (49%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D Y+ + FK++ + +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 97 IDKEYYYTKEEQFKQVFKELDFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTK 156
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P + E V + ++ +F + +A E E IGV+H+ R + ST
Sbjct: 157 HTDLPVSVF---ESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENST 213
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R++ I Y+ ++P NHEIL + + LP L+ +
Sbjct: 214 VAEHLIAQHSAIKMLHSRVKLILEYVKASEAGEVPFNHEILREAYALCHCLPVLSTDKFK 273
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 274 TDFYDQCNDVGLMAYLGTITKTCNTMNQFVN 304
>sp|Q07G98|CSN6_XENTR COP9 signalosome complex subunit 6 OS=Xenopus tropicalis GN=cops6
PE=2 SV=1
Length = 319
Score = 78.6 bits (192), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 5/211 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
++ Y+ + FK++ +GWY+TG +D+ +H+ + +P+ + ++ K
Sbjct: 92 INKEYYYTKEEQFKQVFKDMEFLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTK 151
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTI--ST 136
+P Y E V + ++ + + +A E E IGV+H+ R + ST
Sbjct: 152 HTDLPVSVY---ESVIDIVNGEATMLLAELSYTLATEEAERIGVDHVARMTATGSGENST 208
Query: 137 LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELI 196
+A + + +A+K L +R+R I Y+ ++P NHEIL + + LP L+ +
Sbjct: 209 VAEHLIAQHSAIKMLHSRVRLILEYVRAAEAGEVPFNHEILREASALCHCLPVLSTDKFK 268
Query: 197 KAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
F + ND+ L+ YL ++ ++ ++ +N
Sbjct: 269 MDFYDQCNDVGLMSYLGTITKTCNTMNQFVN 299
>sp|B4KBI4|EI3F1_DROMO Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila mojavensis GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 110/210 (52%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++NA E+VVGW++TG ++ + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNANENVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQSGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ K+ +F +P E+ ++E E G++ L + V + T++
Sbjct: 127 MGLRAYICIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVTVSPAHRPKTVA 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEAATKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ D+++VI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
>sp|A5A6I3|EIF3F_PANTR Eukaryotic translation initiation factor 3 subunit F OS=Pan
troglodytes GN=EIF3F PE=2 SV=1
Length = 361
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 2 VISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF 61
SVP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ +
Sbjct: 138 CFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 62 HNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
PNP+ + +D + + KAY V + + +F + + A ++ E IG
Sbjct: 195 SREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 122 VEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNH 174
V+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++
Sbjct: 253 VDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADN 306
Query: 175 EILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
+ L + N +P + + + ND+++V YL++L +S IAL N K++N
Sbjct: 307 TVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIAL----NEKLVN 360
>sp|Q9DCH4|EIF3F_MOUSE Eukaryotic translation initiation factor 3 subunit F OS=Mus
musculus GN=Eif3f PE=1 SV=2
Length = 361
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 2 VISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF 61
SVP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ +
Sbjct: 138 CFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 62 HNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
PNP+ + +D + + KAY V + + +F + + A ++ E IG
Sbjct: 195 SREAPNPIHLTVDTGLQHGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 122 VEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNH 174
V+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++
Sbjct: 253 VDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADN 306
Query: 175 EILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
+ L + N +P + + + ND+++V YL++L +S IAL N K++N
Sbjct: 307 TVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIAL----NEKLVN 360
>sp|Q4R5B8|EIF3F_MACFA Eukaryotic translation initiation factor 3 subunit F OS=Macaca
fascicularis GN=EIF3F PE=2 SV=1
Length = 361
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 2 VISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF 61
SVP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ +
Sbjct: 138 CFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 194
Query: 62 HNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
PNP+ + +D + + KAY V + + +F + + A ++ E IG
Sbjct: 195 SREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 252
Query: 122 VEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNH 174
V+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++
Sbjct: 253 VDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADN 306
Query: 175 EILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
+ L + N +P + + + ND+++V YL++L +S IAL N K++N
Sbjct: 307 TVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIAL----NEKLVN 360
>sp|O00303|EIF3F_HUMAN Eukaryotic translation initiation factor 3 subunit F OS=Homo
sapiens GN=EIF3F PE=1 SV=1
Length = 357
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 117/238 (49%), Gaps = 22/238 (9%)
Query: 2 VISVPFEEDDKDPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLF 61
SVP E + + + D + ++MY + K+++ E ++GWY+TG + E+ + IH+ +
Sbjct: 134 CFSVPHNESEDEVAV---DMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYY 190
Query: 62 HNYVPNPVLVIIDVQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIG 121
PNP+ + +D + + KAY V + + +F + + A ++ E IG
Sbjct: 191 SREAPNPIHLTVDTSLQNGRMSIKAY--VSTLMGVPGRTMGVMFTPLTVKYAYYDTERIG 248
Query: 122 VEHLLRDVKDTTISTLANEVTG---KLTALKGLDARLRE----IRGYLDLVIDEKLPLNH 174
V+ +++ T S N V G L + G AR+++ + Y + V+ K+ ++
Sbjct: 249 VDLIMK----TCFS--PNRVIGLSSDLQQVGGASARIQDALSTVLQYAEDVLSGKVSADN 302
Query: 175 EILYHLQDVFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
+ L + N +P + + + ND+++V YL++L +S IAL N K++N
Sbjct: 303 TVGRFLMSLVNQVPKIVPDDFETMLNSNINDLLMVTYLANLTQSQIAL----NEKLVN 356
>sp|Q7QD36|EIF3F_ANOGA Eukaryotic translation initiation factor 3 subunit F OS=Anopheles
gambiae GN=eIF3-S5 PE=3 SV=3
Length = 287
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 102/208 (49%), Gaps = 8/208 (3%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
Y +Y + +R+NA E++VGW++TG ++ + IH+ + NPV + +D
Sbjct: 71 GYASDLYELNQRVNASENIVGWWATGQEVTNHSSVIHEYYARECTNPVHLTLDTSLTGAR 130
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANEV 141
+ KAY V KS +F + E+ ++E E +G++ ++ + + + V
Sbjct: 131 MGIKAYVCVSLGVPGG--KSGCMFTPINVEVTSYEPEIVGLQLCMKTIGVQSNPSRPRTV 188
Query: 142 TGKLTALKGLDAR------LREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEL 195
+ L + DA L ++ Y++ V+ EK + + L D+ + +PN+ +
Sbjct: 189 SPMLDLAQVTDASDKLLALLSDVLAYVEDVLSEKQQPENTVGRALLDLIHSVPNMTGDQF 248
Query: 196 IKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ F+ D+++V+ LS LI++ + L+
Sbjct: 249 AQMFNSNVKDLLMVVTLSQLIKTQLQLN 276
>sp|B0X2G0|EIF3F_CULQU Eukaryotic translation initiation factor 3 subunit F OS=Culex
quinquefasciatus GN=eIF3-S5 PE=3 SV=1
Length = 287
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D
Sbjct: 71 GYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLTAAR 130
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTI 134
+ KAY V K+ +F + E+ ++E E +G+ + + + T+
Sbjct: 131 MGIKAYVCVSLGVPGG--KTGCMFTPINVEVTSYEPEVVGLSLCAKTIGVQSNPARPRTV 188
Query: 135 STL-----ANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPN 189
S + +E +GKL L G E+ Y++ V+ EK ++ + L D+ + +PN
Sbjct: 189 SPMLDLAQVSEASGKLQTLLG------EVLNYVEDVLAEKQQPDNFVGRALLDLIHSVPN 242
Query: 190 LNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ E K F+ D+++V+ LS LI++ + L+
Sbjct: 243 MKHEEFAKMFNSNVKDLLMVVTLSQLIKTQLQLN 276
>sp|Q8W1P0|CSN6B_ARATH COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana
GN=CSN6B PE=1 SV=2
Length = 317
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 108/220 (49%), Gaps = 8/220 (3%)
Query: 13 DPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVI 72
DP + LD ++ E ++K++ +V+GWYSTG E+D+ IH+ + +PV V+
Sbjct: 82 DPALDTLDRSFLEKKQELYKKVFPDFYVLGWYSTGSDATESDMHIHKALMDINESPVYVL 141
Query: 73 ID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRD 128
++ + + +P Y V + Q +FVH I E E I V+H+ L+
Sbjct: 142 LNPAINHAQKDLPVTIYESEFHVIDGI---PQSIFVHTSYTIETVEAERISVDHVAHLKP 198
Query: 129 VKDTTIST-LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLL 187
+ +T LA +TG +A+K L++R+R + ++ + P + +L + + L
Sbjct: 199 SDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHIVAMQKGDKPCENSVLRQVSSLLRSL 258
Query: 188 PNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
P + + F ++ ND +L+ YL+ + ++ +++
Sbjct: 259 PAAESEKFNENFLMEYNDKLLMSYLAMITNCTSNMNEVVD 298
>sp|B4NJR8|EI3F1_DROWI Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila willistoni GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 73.9 bits (180), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV V +D +
Sbjct: 67 SYALDMYELNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHVTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHAVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIAL 222
+ + F+ D+++VI LS LI++ + L
Sbjct: 242 QFTQMFNANVRDLLMVITLSQLIKTQLQL 270
>sp|B4LZ60|EI3F1_DROVI Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila virilis GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++NA E VVGW++TG ++ + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNANESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ K+ +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LELILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIAL 222
+ + F+ D+++VI LS LI++ + L
Sbjct: 242 QFTQMFNANVRDLLMVITLSQLIKTQLQL 270
>sp|Q54C49|EIF3F_DICDI Eukaryotic translation initiation factor 3 subunit F
OS=Dictyostelium discoideum GN=eif3f PE=3 SV=1
Length = 284
Score = 72.4 bits (176), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 96/212 (45%), Gaps = 3/212 (1%)
Query: 23 YHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPN--PVLVIIDVQPKEL 80
Y M + + + +E ++GWY+TG + EN + I+ + + + N P+ + +D
Sbjct: 74 YQRKMLDLHLKSSPREPIIGWYATGNDINENSVHINNFYRDEMGNSTPIHLTVDTGLTND 133
Query: 81 GIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTTISTLANE 140
+ AY + N F +P EI E E G+E + + D ++L +E
Sbjct: 134 TMGIHAYM-AHNLSLNPESSLGSYFSQLPLEILTFEAENAGLESIAQTKYDQQSTSLLSE 192
Query: 141 VTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAELIKAFS 200
+ +L LD L I Y++ V ++ + + L LP N + K +
Sbjct: 193 LESLQGSLTKLDEMLESITSYIESVEKGEIQGDPRLGRFLAKTIQALPKANAQVMDKVIN 252
Query: 201 VKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
D+++++YLSSL RS +A+ I++ + N
Sbjct: 253 NSVKDLLMIVYLSSLTRSQLAVATKISHSLSN 284
>sp|Q1HR47|EIF3F_AEDAE Eukaryotic translation initiation factor 3 subunit F OS=Aedes
aegypti GN=eIF3-S5 PE=2 SV=1
Length = 287
Score = 71.6 bits (174), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 105/214 (49%), Gaps = 20/214 (9%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
Y +Y + +R+N E++VGW++TG ++ + IH+ + NP+ + +D
Sbjct: 71 GYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEYYARECNNPIHLTLDTSLSAAR 130
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV-------KDTTI 134
+ KAY V K+ +F + EI+++E E +G++ + + + T+
Sbjct: 131 MGIKAYVCVSLGVPGG--KTGCMFTPINVEISSYEPEVVGLQLCSKTIGVQQNASRPRTV 188
Query: 135 STLAN-----EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPN 189
S + + E + KL L G E+ Y++ V+ EK ++ + L D+ + +PN
Sbjct: 189 SPMLDLAQITEASDKLLTLLG------EVLNYVEDVLAEKQQPDNSVGRALLDLIHSVPN 242
Query: 190 LNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + + F+ D+++V+ LS LI++ + L+
Sbjct: 243 MTSDQFAQMFNSNVKDLLMVVTLSQLIKTQLQLN 276
>sp|Q8W206|CSN6A_ARATH COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana
GN=CSN6A PE=1 SV=2
Length = 317
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 8/206 (3%)
Query: 13 DPGIWFLDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVI 72
DP LD ++ E ++K++ +++GWYSTG E+D+ IH+ + +PV V+
Sbjct: 82 DPSTQTLDRSFLEKKQELYKKVFPDFYILGWYSTGSDAEESDMHIHKALMDINESPVYVL 141
Query: 73 ID--VQPKELGIPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRD 128
++ + + +P Y V + Q +F H I E E I V+H+ L+
Sbjct: 142 LNPAINHTQKDLPVTIYESELHVIDGI---PQLIFAHTSYTIETVEAERISVDHVAHLKP 198
Query: 129 VKDTTIST-LANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLL 187
+ +T LA +TG +A+K L++R+R + L + ++ +L + + L
Sbjct: 199 SDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNLAAMQKGDKSCDNSVLRQVSSLLRRL 258
Query: 188 PNLNVAELIKAFSVKTNDMMLVIYLS 213
P + F ++ ND +L+ YL+
Sbjct: 259 PAMESERFQDNFLMEYNDKLLITYLA 284
>sp|B4JGX4|EI3F1_DROGR Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila grimshawi GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 109/213 (51%), Gaps = 19/213 (8%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG ++ + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNEVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ K+ +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAQRPKTVP 184
Query: 136 TLAN-----EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 190
+ + E + KL +L LD L+ Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASQKLQSL--LDLILK----YVDDVIAHKVTPDNAVGRQLLDLIHSVPHM 238
Query: 191 NVAELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ D+++VI LS LI++ + L+
Sbjct: 239 THEQFTQMFNANVRDLLMVITLSQLIKTQLQLN 271
>sp|Q9VCY3|CSN6_DROME COP9 signalosome complex subunit 6 OS=Drosophila melanogaster
GN=CSN6 PE=1 SV=1
Length = 341
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 104/212 (49%), Gaps = 6/212 (2%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
++ +Y+ +K++ + +GWY+TG +D+ I + P+++ ++ +
Sbjct: 113 INKDYYNKKEQQYKQVFSDLDFIGWYTTGDNPTADDIKIQRQIAAINECPIMLQLNPLSR 172
Query: 79 ELG-IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKDTT--IS 135
+ +P K + E + + ++ +FV + +A E E IGV+H+ R + + S
Sbjct: 173 SVDHLPLKLF---ESLIDLVDGEATMLFVPLTYTLATEEAERIGVDHVARMTSNESGEKS 229
Query: 136 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVAEL 195
+A + + +A+K L+ R++ + Y+ V KL N EIL + + LP + V
Sbjct: 230 VVAEHLVAQDSAIKMLNTRIKIVLQYIRDVEAGKLRANQEILREAYALCHRLPVMQVPAF 289
Query: 196 IKAFSVKTNDMMLVIYLSSLIRSVIALHNLIN 227
+ F + ND+ L+ YL +L + +H+ +N
Sbjct: 290 QEEFYTQCNDVGLISYLGTLTKGCNDMHHFVN 321
>sp|B4QVL3|EI3F1_DROSI Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila simulans GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ +++LVI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLN 271
>sp|B4I3S1|EI3F1_DROSE Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila sechellia GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ +++LVI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLN 271
>sp|Q9VN50|EI3F1_DROME Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila melanogaster GN=eIF3-S5-1 PE=2 SV=1
Length = 280
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ +++LVI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLN 271
>sp|B3P239|EI3F1_DROER Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila erecta GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ +++LVI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLN 271
>sp|B4PUG5|EI3F1_DROYA Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila yakuba GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMTHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ +++LVI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLLVITLSQLIKTQLQLN 271
>sp|B3M123|EI3F1_DROAN Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 105/212 (49%), Gaps = 19/212 (8%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ +AY ++ KS +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRAYVCIQLGVPGG--KSGCMFTPIPVELTSYEPETFGLKLLQKTVGVSPAHRPKTVP 184
Query: 136 TLAN-----EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 190
+ + E + KL L LD L+ Y+D VI K+ ++ + L D+ + +P++
Sbjct: 185 PMLDLAQISEASQKLQQL--LDLILK----YVDDVIAHKVTPDNAVGRQLLDLIHSVPHM 238
Query: 191 NVAELIKAFSVKTNDMMLVIYLSSLIRSVIAL 222
+ + F+ +++LVI LS LI++ + L
Sbjct: 239 THEQFTQMFNANVRNLLLVITLSQLIKTQLQL 270
>sp|Q295I4|EI3F1_DROPS Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila pseudoobscura pseudoobscura GN=eIF3-S5-1
PE=3 SV=1
Length = 280
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ ++Y ++ K+ +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVAPANRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P+++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ ++++VI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLMVITLSQLIKTQLQLN 271
>sp|B4GDU3|EI3F1_DROPE Eukaryotic translation initiation factor 3 subunit F-1
OS=Drosophila persimilis GN=eIF3-S5-1 PE=3 SV=1
Length = 280
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 108/210 (51%), Gaps = 13/210 (6%)
Query: 22 NYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPKELG 81
+Y MY + +++N+ E VVGW++TG + + IH+ + NPV + +D +
Sbjct: 67 SYALDMYDLNRKVNSNEAVVGWWATGNDVTNHSSVIHEYYARECNNPVHLTVDTSLQGGR 126
Query: 82 IPTKAYYDVEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDV------KDTTIS 135
+ ++Y ++ K+ +F +P E+ ++E E G++ L + V + T+
Sbjct: 127 MGLRSYVCIQLGVPGG--KTGCMFTPIPVELTSYEPETFGLKLLQKTVGVAPANRPKTVP 184
Query: 136 TLAN--EVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNLNVA 193
+ + +++ T L+ L L I Y+D VI K+ ++ + L D+ + +P+++
Sbjct: 185 PMLDLAQISEASTKLQSL---LDLILKYVDDVIAHKVTPDNAVGRQLLDLIHSVPHMSHE 241
Query: 194 ELIKAFSVKTNDMMLVIYLSSLIRSVIALH 223
+ + F+ ++++VI LS LI++ + L+
Sbjct: 242 QFTQMFNANVRNLLMVITLSQLIKTQLQLN 271
>sp|Q4WTH0|EIF3F_ASPFU Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya
fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 /
FGSC A1100) GN=AFUA_1G09330 PE=3 SV=1
Length = 345
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVL-VII 73
+D Y + M ++ + N KE +VGWY+T +L I + P+P + + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTV 147
Query: 74 DVQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKD 131
+P + I T+AY V E A + F+ VP EI E E+ G+E + KD
Sbjct: 148 STEPGK-DIETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGEAEKSGLEAIA-SAKD 203
Query: 132 TTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVF 184
+ T T ++ L+ + E+ G Y++ VIDE+ P + + L +
Sbjct: 204 AE-----SRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNAL 258
Query: 185 NLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P + A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 259 ALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|B0XQ55|EIF3F_ASPFC Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya
fumigata (strain CEA10 / CBS 144.89 / FGSC A1163)
GN=AFUB_008750 PE=3 SV=1
Length = 345
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVL-VII 73
+D Y + M ++ + N KE +VGWY+T +L I + P+P + + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTV 147
Query: 74 DVQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKD 131
+P + I T+AY V E A + F+ VP EI E E+ G+E + KD
Sbjct: 148 STEPGK-DIETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGEAEKSGLEAIA-SAKD 203
Query: 132 TTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVF 184
+ T T ++ L+ + E+ G Y++ VIDE+ P + + L +
Sbjct: 204 AE-----SRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNAL 258
Query: 185 NLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P + A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 259 ALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|A1D3E1|EIF3F_NEOFI Eukaryotic translation initiation factor 3 subunit F OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 /
NRRL 181) GN=NFIA_016300 PE=3 SV=1
Length = 345
Score = 67.4 bits (163), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 105/228 (46%), Gaps = 23/228 (10%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVL-VII 73
+D Y + M ++ + N KE +VGWY+T +L I + P+P + + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTV 147
Query: 74 DVQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHLLRDVKD 131
+P + I T+AY V E A + F+ VP EI E E+ G+E + KD
Sbjct: 148 STEPGK-DIETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGEAEKSGLE-TIASAKD 203
Query: 132 TTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDVF 184
+ T T ++ L+ + E+ G Y++ VIDE+ P + + L +
Sbjct: 204 AE-----SRATNIFTDIEALERAIEEVLGMIDRVSRYVESVIDEEAPASTALGQFLLNAL 258
Query: 185 NLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P + A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 259 ALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|Q2UPM0|EIF3F_ASPOR Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus
oryzae (strain ATCC 42149 / RIB 40) GN=AO090005001590
PE=3 SV=1
Length = 345
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 108/230 (46%), Gaps = 27/230 (11%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNY----VPNPVL-VII 73
+D Y + M ++ + N KE +VGWY+T +L I + P+P + + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTFPHPAVHLTV 147
Query: 74 DVQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDV 129
+P + + T+AY V E A + F+ VP EI E E+ G+E + RDV
Sbjct: 148 STEPGK-DVETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGETEKSGLESIAAARDV 204
Query: 130 KDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQD 182
+ S AN T ++ L+ + E+ G Y++ VIDE+ P + + L +
Sbjct: 205 E----SRAAN----IFTDIEALERAVEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLN 256
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P + A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 257 ALALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|O04202|EIF3F_ARATH Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis
thaliana GN=TIF3F1 PE=2 SV=1
Length = 293
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYVPNPVLVIIDVQPK 78
+D +YH +M + ++N+KE +VGWYSTG + IH + VPNP+ + +D
Sbjct: 85 VDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDFYAREVPNPIHLTVDTGFT 144
Query: 79 ELGIPTKAYYDVEEVKENATQKSQKVFVH---VPSEIAAHEVEEIGVEHLLRDVKDTTIS 135
KA+ V N + +++ H +P ++ + E +G + L K T++
Sbjct: 145 NGEGTIKAF-----VSSNLSLGDRQLVAHFQEIPVDLRMVDAERVGFDVL----KATSVD 195
Query: 136 TLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 190
L N++ G ++ L + ++ Y+D V+ ++ ++ I + D LP L
Sbjct: 196 KLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIADAVASLPKL 250
>sp|A1CQH7|EIF3F_ASPCL Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus
clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC
3887 / NRRL 1) GN=ACLA_026150 PE=3 SV=1
Length = 345
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 102/229 (44%), Gaps = 25/229 (10%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVLVIID 74
+D Y + M ++ + N KE +VGWY+T +L I + P+P + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTV 147
Query: 75 VQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVK 130
I T+AY V E A + F+ VP EI E E+ G+E + RD +
Sbjct: 148 STEAGKDIETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGEAEKSGLEAISSARDAE 205
Query: 131 DTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQDV 183
N T T ++ L+ + ++ G Y++ VIDE+ P + + L +
Sbjct: 206 --------NRATNIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQFLLNT 257
Query: 184 FNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P + A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 258 LALAPKVEPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|Q1DRC9|EIF3F_COCIM Eukaryotic translation initiation factor 3 subunit F
OS=Coccidioides immitis (strain RS) GN=CIMG_07134 PE=3
SV=1
Length = 348
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVL-VII 73
+D Y + M ++ + N KE +VGWY+T +L I + P+P + + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYGGQGDGTWPHPAVHLTV 147
Query: 74 DVQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDV 129
+P + I T+ Y V E A + F+ VP EI E E G+E + RD
Sbjct: 148 STEPGK-DIETRTYISAPVGVTAERAADSA--AFIPVPYEIRYSEAERNGLEAIAQARDA 204
Query: 130 KDTTISTLANEVTGKLTALKGLDARLREIRG-------YLDLVIDEKLPLNHEILYHLQD 182
+D S T ++ L+ + E+ G Y++ VIDE+ P + + L +
Sbjct: 205 EDRASSL--------FTDIETLEKSIEEVLGMIDRVSKYVESVIDEEAPASTALGQFLLN 256
Query: 183 VFNLLPNLNVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
L P ++ A++ F+ D+++V YL++ IR+ + L N + L
Sbjct: 257 ALALAPKVDPADIESDFNKHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
>sp|A2QQ10|EIF3F_ASPNC Eukaryotic translation initiation factor 3 subunit F OS=Aspergillus
niger (strain CBS 513.88 / FGSC A1513) GN=An08g00880
PE=3 SV=1
Length = 375
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 103/222 (46%), Gaps = 11/222 (4%)
Query: 19 LDHNYHESMYSMFKRINAKEHVVGWYSTGPKLRENDLDIHQLFHNYV----PNPVLVIID 74
+D Y + M ++ + N KE +VGWY+T +L I + P+P + +
Sbjct: 88 VDMEYQKQMLALHLKANPKEVLVGWYATSSELNTFSALIQNFYSGQGDGTWPHPAVHLTV 147
Query: 75 VQPKELGIPTKAYYD--VEEVKENATQKSQKVFVHVPSEIAAHEVEEIGVEHL--LRDVK 130
I T+AY V E A + F+ VP EI E E+ G+E + RD +
Sbjct: 148 STEAGKDIETRAYISAPVGVTAERAADSA--AFIPVPYEIRYGEAEKSGLEAIGAARDAE 205
Query: 131 DTTISTLANEVTGKLTALKGLDARLREIRGYLDLVIDEKLPLNHEILYHLQDVFNLLPNL 190
+ + + ++ A++ + + + Y++ VIDE+ P + + +L + L P +
Sbjct: 206 ERR-ANIFTDIEALERAIEDVLGMIDRVSRYVESVIDEEAPASTALGQYLLNTLALAPKV 264
Query: 191 NVAELIKAFSVKTNDMMLVIYLSSLIRSVIALHNLINNKILN 232
A++ + F+ D+++V YL++ IR+ + L N + L
Sbjct: 265 EPADIERDFNNHIQDVLVVSYLANTIRTQMELSNRLATAQLT 306
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,447,431
Number of Sequences: 539616
Number of extensions: 4112379
Number of successful extensions: 12907
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 12763
Number of HSP's gapped (non-prelim): 155
length of query: 252
length of database: 191,569,459
effective HSP length: 115
effective length of query: 137
effective length of database: 129,513,619
effective search space: 17743365803
effective search space used: 17743365803
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)