Query 036426
Match_columns 167
No_of_seqs 111 out of 125
Neff 3.9
Searched_HMMs 13730
Date Mon Mar 25 21:44:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036426.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036426hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtm1 f.23.35.1 (M:1-36) Pho 41.4 1.3 9.1E-05 26.1 -1.4 14 150-163 6-19 (36)
2 d2pspa1 g.16.1.1 (A:1-53) Panc 11.8 39 0.0028 20.4 1.2 11 126-136 42-52 (53)
3 d2nt0a2 c.1.8.3 (A:78-431) Glu 10.7 52 0.0038 25.3 1.9 16 5-20 144-159 (354)
4 d2pspa2 g.16.1.1 (A:54-106) Pa 9.9 55 0.004 19.6 1.4 13 126-138 38-50 (53)
5 d1e9ta_ g.16.1.1 (A:) Intestin 6.5 76 0.0055 19.3 0.9 12 126-137 44-55 (59)
6 d1nofa2 c.1.8.3 (A:44-320) Gly 6.1 52 0.0038 24.7 -0.1 16 5-20 108-123 (277)
7 d2h9fa2 d.21.1.4 (A:187-395) H 5.9 63 0.0046 24.3 0.3 28 81-108 55-82 (209)
8 d1iwga7 f.35.1.1 (A:7-37,A:331 5.1 1.3E+02 0.0095 21.2 1.6 30 137-166 36-65 (199)
9 d2a7ya1 b.34.6.3 (A:1-80) Hypo 4.7 1.6E+02 0.012 19.2 1.7 20 117-136 36-55 (80)
10 d2oz4a2 b.1.1.4 (A:186-282) In 4.2 70 0.0051 21.7 -0.5 16 64-79 43-58 (97)
No 1
>d2axtm1 f.23.35.1 (M:1-36) Photosystem II reaction center protein M, PsbM {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=41.43 E-value=1.3 Score=26.09 Aligned_cols=14 Identities=29% Similarity=0.629 Sum_probs=12.6
Q ss_pred HHHhhhheeeeccC
Q 036426 150 VGINCSGLFWSFPT 163 (167)
Q Consensus 150 vG~v~S~lF~iFPt 163 (167)
.|++++.+|++.||
T Consensus 6 Lg~iAt~LFilvPt 19 (36)
T d2axtm1 6 LGLIATALFVLVPS 19 (36)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 58999999999986
No 2
>d2pspa1 g.16.1.1 (A:1-53) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}
Probab=11.78 E-value=39 Score=20.40 Aligned_cols=11 Identities=27% Similarity=0.344 Sum_probs=8.8
Q ss_pred CcceeeCCCCc
Q 036426 126 HVTACLFPDHV 136 (167)
Q Consensus 126 ~v~~CffP~~~ 136 (167)
++.-||||..+
T Consensus 42 ~~PwCfyP~~~ 52 (53)
T d2pspa1 42 GVPWCFKPLPA 52 (53)
T ss_dssp TSCSEECCCCC
T ss_pred CCCcCcccCCC
Confidence 67789999765
No 3
>d2nt0a2 c.1.8.3 (A:78-431) Glucosylceramidase, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.72 E-value=52 Score=25.25 Aligned_cols=16 Identities=13% Similarity=0.545 Sum_probs=14.8
Q ss_pred cccceeEEecCCCCCC
Q 036426 5 EDIGIKIYTANPQNDP 20 (167)
Q Consensus 5 ~~~g~~v~~a~~~~~~ 20 (167)
++.||.|+.-+|+|||
T Consensus 144 ~~~Gi~i~~isp~NEP 159 (354)
T d2nt0a2 144 AEHKLQFWAVTAENEP 159 (354)
T ss_dssp HHTTCCCSEEESCSSG
T ss_pred HHcCCCceEeccCcCc
Confidence 5679999999999998
No 4
>d2pspa2 g.16.1.1 (A:54-106) Pancreatic spasmolytic polypeptide {Pig (Sus scrofa) [TaxId: 9823]}
Probab=9.91 E-value=55 Score=19.64 Aligned_cols=13 Identities=38% Similarity=0.692 Sum_probs=9.7
Q ss_pred CcceeeCCCCcch
Q 036426 126 HVTACLFPDHVKY 138 (167)
Q Consensus 126 ~v~~CffP~~~~~ 138 (167)
|+.-||||....+
T Consensus 38 ~~PwCfyp~~~~e 50 (53)
T d2pspa2 38 EVPWCFFPMSVED 50 (53)
T ss_dssp TSCSEECCCCGGG
T ss_pred CCCcCccCCCccc
Confidence 6777999987543
No 5
>d1e9ta_ g.16.1.1 (A:) Intestinal trefoil factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.47 E-value=76 Score=19.33 Aligned_cols=12 Identities=25% Similarity=0.312 Sum_probs=9.0
Q ss_pred CcceeeCCCCcc
Q 036426 126 HVTACLFPDHVK 137 (167)
Q Consensus 126 ~v~~CffP~~~~ 137 (167)
|+.-||||..+.
T Consensus 44 ~~PwCfyp~~~~ 55 (59)
T d1e9ta_ 44 GVPWCFKPLQEA 55 (59)
T ss_dssp TSCSSBCCCCCC
T ss_pred CCccccccCCcc
Confidence 677799997653
No 6
>d1nofa2 c.1.8.3 (A:44-320) Glycosyl hydrolase family 5 xylanase, catalytic domain {Erwinia chrysanthemi [TaxId: 556]}
Probab=6.08 E-value=52 Score=24.73 Aligned_cols=16 Identities=31% Similarity=0.617 Sum_probs=14.6
Q ss_pred cccceeEEecCCCCCC
Q 036426 5 EDIGIKIYTANPQNDP 20 (167)
Q Consensus 5 ~~~g~~v~~a~~~~~~ 20 (167)
++.||.|+.-+|+|||
T Consensus 108 ~~~Gi~i~~is~qNEP 123 (277)
T d1nofa2 108 QTNGAPLYAISIQNEP 123 (277)
T ss_dssp HHTTCCCSEEESCSCT
T ss_pred HHcCCCeeEEeecCCC
Confidence 5679999999999998
No 7
>d2h9fa2 d.21.1.4 (A:187-395) Hypothetical protein PA0793 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=5.95 E-value=63 Score=24.25 Aligned_cols=28 Identities=4% Similarity=-0.040 Sum_probs=19.7
Q ss_pred hhHHHHHHHHHHhhhhhccccccccCCC
Q 036426 81 VSTQIIHSLLGLCSLSCFFFHFTDSFKG 108 (167)
Q Consensus 81 ~nr~Lt~~Ll~lca~sCff~sFTDSf~~ 108 (167)
.|+-+..-|-.+-.....-+-+.|+..+
T Consensus 55 ~~~~ll~~lE~IR~~aa~~mGL~~~~~~ 82 (209)
T d2h9fa2 55 GDPQQLARFERIRVAGALRMGLIKTPEE 82 (209)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTSCSSGGG
T ss_pred CCHHHHHHHHHHHHHHHHHcCCCCchhH
Confidence 4666777777777777777888886643
No 8
>d1iwga7 f.35.1.1 (A:7-37,A:331-498) Multidrug efflux transporter AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Probab=5.11 E-value=1.3e+02 Score=21.21 Aligned_cols=30 Identities=3% Similarity=0.029 Sum_probs=23.0
Q ss_pred chHHHHHHhhhhHHHHhhhheeeeccCCCC
Q 036426 137 KYMDQVMESFPLMVGINCSGLFWSFPTQDT 166 (167)
Q Consensus 137 ~~~~evl~~lPl~vG~v~S~lF~iFPt~Rh 166 (167)
+..+++.+++.+++-++.-.+|+.|.+-|.
T Consensus 36 ~si~~~~~~l~ia~~lv~~vl~l~~rs~~~ 65 (199)
T d1iwga7 36 ISIHEVVKTLVEAIILVFLVMYLFLQNFRA 65 (199)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 446889999988888877777777776664
No 9
>d2a7ya1 b.34.6.3 (A:1-80) Hypothetical protein Rv2302/MT2359 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.72 E-value=1.6e+02 Score=19.16 Aligned_cols=20 Identities=15% Similarity=0.135 Sum_probs=16.9
Q ss_pred cceeeccccCcceeeCCCCc
Q 036426 117 KYKVGLTDFHVTACLFPDHV 136 (167)
Q Consensus 117 ~yrLr~~Df~v~~CffP~~~ 136 (167)
-|.+||.|=+-..=+||++.
T Consensus 36 PY~VRw~ddGHe~lv~PGpD 55 (80)
T d2a7ya1 36 PYVVRWLVNGHETTVYPGSD 55 (80)
T ss_dssp CEEEEETTTTEEEEECCCSS
T ss_pred CEEEEeCCCCcEEEEecCCC
Confidence 49999988878888899885
No 10
>d2oz4a2 b.1.1.4 (A:186-282) Intercellular adhesion molecule-1, ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.21 E-value=70 Score=21.74 Aligned_cols=16 Identities=19% Similarity=0.011 Sum_probs=12.8
Q ss_pred HHHhhcccccCCCCcc
Q 036426 64 TFEMLLPSVSNNGYFS 79 (167)
Q Consensus 64 aFq~LsP~~TN~G~C~ 79 (167)
.=|.|+|-+|++|+=.
T Consensus 43 Gdq~L~~~vt~~gD~l 58 (97)
T d2oz4a2 43 GDQRLNPTVTYGNDSF 58 (97)
T ss_dssp TTEECCCEEEECSSEE
T ss_pred cCcccCceeeecCceE
Confidence 3478999999999853
Done!